BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 039692
(417 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|296086409|emb|CBI31998.3| unnamed protein product [Vitis vinifera]
Length = 534
Score = 547 bits (1410), Expect = e-153, Method: Compositional matrix adjust.
Identities = 292/501 (58%), Positives = 349/501 (69%), Gaps = 84/501 (16%)
Query: 1 WLNHGGDLNNRR-YAYGEVLINPVTVRNLRLRWSFYAGKDISATPAVANGVVYFPSWNGY 59
W NHGGDL+N R + E LINP+ + LRL+W F+ G D +ATPAVA+GVVYFPSWNGY
Sbjct: 34 WFNHGGDLSNSRSRSIEEPLINPLLISKLRLKWKFFTGDDTTATPAVAHGVVYFPSWNGY 93
Query: 60 LYAVNAFNGALIWEQNLSKLTGLSGTGIVVNVTV-------------------AVVVAVS 100
LYAVNAF+GAL+W Q+L +LTGLS G+VVNVTV AVVVA++
Sbjct: 94 LYAVNAFSGALVWRQHLGELTGLSPAGVVVNVTVSRTTPVIAGHLLIIGIYGPAVVVAIN 153
Query: 101 RSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVR 160
R +G LVWST +D RPRSQIT SG+ Y+ FYVG+SSLE LPA+QCCTFRGS+AKLD++
Sbjct: 154 RFSGALVWSTVLDTRPRSQITTSGTPYLEGFYVGVSSLEVTLPAEQCCTFRGSMAKLDIQ 213
Query: 161 NGRIIWQTYMLPDNGGKRGGYSGAAVWGSSPAIDVIRR-------------------QKQ 201
G ++W+TY +PDN GK GGYSGAA+WGSSPAID R Q
Sbjct: 214 TGAVLWRTYTIPDNAGKLGGYSGAAIWGSSPAIDTKRNLVYIGTGNLYNAPTEVQQCQAN 273
Query: 202 NNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPG 261
N T P+ PDQCI+ D++ +SI+AL++DSG+I W + GGYD+FYF CLVPNNP CP G
Sbjct: 274 RNNQTIPSQPDQCIAPDVHFDSILALELDSGKIRWFRQFGGYDVFYFVCLVPNNPACPTG 333
Query: 262 PNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDIIWFKLAGPGGREGGG 321
PNLDADFGEAPMLLTI NG RDVVVAVQKSGFAWA DRD+GDI+WF LAGPGG EGGG
Sbjct: 334 PNLDADFGEAPMLLTIFPNGTRRDVVVAVQKSGFAWALDRDTGDIVWFNLAGPGGLEGGG 393
Query: 322 VWGAATDGRRVYTNIVNND--------------------------RIIWSTADPSNETAH 355
VWGAATDG+RVYTNIVNN I+WSTA+PSNETAH
Sbjct: 394 VWGAATDGKRVYTNIVNNAGVRFRLAPSNQTTTFGAWVALDANTGEIVWSTANPSNETAH 453
Query: 356 GPVTVVNGVLFAGSVSANG-------------------STVYGGVPASYGCIYLGNGYTV 396
GPVTV NGV+FAGSV+ +G +TVYGG SYGC++LG+GY+V
Sbjct: 454 GPVTVTNGVVFAGSVAPSGPFYAMDAETGTIIWTYNTNATVYGGASVSYGCVFLGHGYSV 513
Query: 397 SLGKFHPTWTPGTSLYAFCTI 417
SL +FHPTWT G S++AFCT+
Sbjct: 514 SLARFHPTWTRGNSVFAFCTV 534
>gi|296086410|emb|CBI31999.3| unnamed protein product [Vitis vinifera]
Length = 536
Score = 542 bits (1396), Expect = e-151, Method: Compositional matrix adjust.
Identities = 293/504 (58%), Positives = 353/504 (70%), Gaps = 88/504 (17%)
Query: 1 WLNHGGDLNN--RRYAYGEVLINPVTVRNLRLRWSFYAGKDISATPAVANGVVYFPSWNG 58
W++HGGDL N R + E INPV + L+L+W F+ G D +ATPAVA+GVVYFPSWNG
Sbjct: 34 WVSHGGDLGNTRSRSIHDEPFINPVLISKLQLKWKFFTGDDTTATPAVADGVVYFPSWNG 93
Query: 59 YLYAVNAFNGALIWEQNLSKLTGLSGTGIVVNVTV-------------------AVVVAV 99
YLYAVNAFNGAL+W ++L +LTGLS TGIVVNVTV AVVVAV
Sbjct: 94 YLYAVNAFNGALVWRRHLGELTGLSPTGIVVNVTVSRTTPAVADDLIVIGIYGPAVVVAV 153
Query: 100 SRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDV 159
+R G LVWST +DP PRSQITMSG+ Y G FYVG+SSLEEALP +QCCTFRGS+AKLD+
Sbjct: 154 NRLKGTLVWSTVLDPHPRSQITMSGTPYSGDFYVGVSSLEEALPPEQCCTFRGSMAKLDI 213
Query: 160 RNGRIIWQTYMLPDNGGKRGGYSGAAVWGSSPAIDVIR--------------------RQ 199
G ++W+TYM+PDNGG+ GGYSGAA+WGSSPAID+ R +
Sbjct: 214 GTGEVLWRTYMIPDNGGQIGGYSGAALWGSSPAIDIKRGLVYIGTGNLYSAPAEVLECQA 273
Query: 200 KQNNQTTKPTHPDQCISS-DIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDC 258
++NNQTT P+ PDQC+ +++ +SI+AL++ SG+I W + YD+FYF CLVPNNP C
Sbjct: 274 RRNNQTT-PSQPDQCVDDPNVHFDSILALELHSGKIRWFRRFESYDVFYFACLVPNNPTC 332
Query: 259 PPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDIIWFKLAGPGGRE 318
PPGPNLDADFGEAPMLLTI +NG RDVVVAVQKSG+ WA DRDSGDI+WF +AGPGG E
Sbjct: 333 PPGPNLDADFGEAPMLLTIFSNGTKRDVVVAVQKSGYTWALDRDSGDIVWFNVAGPGGLE 392
Query: 319 GGGVWGAATDGRRVYTNIVNN--------------------------DRIIWSTADPSNE 352
GGGVWGAATDG+RVYTNIVN+ I+WST +PSNE
Sbjct: 393 GGGVWGAATDGKRVYTNIVNSYLASFRLAPSNQTTTSGAWVALDANTGEIVWSTTNPSNE 452
Query: 353 TAHGPVTVVNGVLFAGSVSANG-------------------STVYGGVPASYGCIYLGNG 393
TAHGPVTV NGV+FAGSV+ +G +TVYGG SYGC+YLG+G
Sbjct: 453 TAHGPVTVANGVVFAGSVAPSGPFYGMDAETGTIIWTYNTNATVYGGASVSYGCVYLGHG 512
Query: 394 YTVSLGKFHPTWTPGTSLYAFCTI 417
YTV+L KFHP+W GTSL+AFCT+
Sbjct: 513 YTVALAKFHPSWNRGTSLFAFCTL 536
>gi|147816815|emb|CAN66558.1| hypothetical protein VITISV_001825 [Vitis vinifera]
Length = 510
Score = 510 bits (1314), Expect = e-142, Method: Compositional matrix adjust.
Identities = 275/490 (56%), Positives = 334/490 (68%), Gaps = 86/490 (17%)
Query: 1 WLNHGGDLNNRR-YAYGEVLINPVTVRNLRLRWSFYAGKDISATPAVANGVVYFPSWNGY 59
W NHGGDL+N R + E LINP+ + LRL+W F+ G D +ATPAVA+GVVYFPSWNGY
Sbjct: 34 WFNHGGDLSNSRSRSIEEPLINPLLISKLRLKWKFFTGDDTTATPAVAHGVVYFPSWNGY 93
Query: 60 LYAVNAFNGALIWEQNLSKLTGLSGTGIVVNVTV-------------------AVVVAVS 100
LYAVNAF+GAL+W Q+L +LTGLS G+VVNVTV AVVVA++
Sbjct: 94 LYAVNAFSGALVWRQHLGELTGLSPAGVVVNVTVSRTTPVIAGHLLIIGIYGPAVVVAIN 153
Query: 101 RSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVR 160
R +G LVWST +D RPRSQIT SG+ Y+ FYVG+SSLE LPA+QCCTFRGS+AKLD++
Sbjct: 154 RFSGALVWSTVLDTRPRSQITTSGTPYLXGFYVGVSSLEVTLPAEQCCTFRGSMAKLDIQ 213
Query: 161 NGRIIWQTYMLPDNGGKRGGYSGAAVWGSSPAIDVIRRQKQNNQTTKPTHPDQCISSDIY 220
G ++W+TY +PDN GK G +V + Q N T P+ PDQCI+ D++
Sbjct: 214 TGAVLWRTYTIPDNAGKLGA-------------EVQQCQANRNNQTIPSQPDQCIAPDVH 260
Query: 221 ANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTISTN 280
+SI+AL++DSG+I W + GGYD+FYF CLVPNNP CP GPNLDADFGEAPMLLTI N
Sbjct: 261 FDSILALELDSGKIRWFRQFGGYDVFYFVCLVPNNPACPTGPNLDADFGEAPMLLTIFPN 320
Query: 281 GRFRDVVVAVQKSGFAWAFDRDSGDIIWFKLA--------GPGGREGGGVWGAATDGRRV 332
G RDVVVAVQKSGFAWA DRD+GDI+WF ++ G GG EGGGVWGAATDG+RV
Sbjct: 321 GTRRDVVVAVQKSGFAWALDRDTGDIVWFNVSISENILLAGLGGLEGGGVWGAATDGKRV 380
Query: 333 YTNIVNND--------------------------RIIWSTADPSNETAHGPVTVVNGVLF 366
YTNIVNN I+WSTA+PSNETAHGPVTV NGV+F
Sbjct: 381 YTNIVNNAGVRFRLAPSNQTTAFGAWVALDANTGEIVWSTANPSNETAHGPVTVTNGVVF 440
Query: 367 AGSVSANG-------------------STVYGGVPASYGCIYLGNGYTVSLGKFHPTWTP 407
AGSV+ +G +TVYGG SYGC+ LG+GY+VSL +FHPTWT
Sbjct: 441 AGSVAPSGPFYAMDAETGTIIWTYNTNATVYGGASVSYGCVXLGHGYSVSLARFHPTWTR 500
Query: 408 GTSLYAFCTI 417
G S++AFCT+
Sbjct: 501 GNSVFAFCTV 510
>gi|296082870|emb|CBI22171.3| unnamed protein product [Vitis vinifera]
Length = 565
Score = 483 bits (1242), Expect = e-133, Method: Compositional matrix adjust.
Identities = 262/500 (52%), Positives = 327/500 (65%), Gaps = 85/500 (17%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAGKDISATPAVANGVVYFPSWNGYL 60
WLNHGGDL NRRYA E I+P TV L L+W FYAG+DI+ATPA+ NG +YFPSWNGYL
Sbjct: 65 WLNHGGDLYNRRYASSETKISPETVSKLSLKWEFYAGQDITATPAIFNGTLYFPSWNGYL 124
Query: 61 YAVNAFNGALIWEQNLSKLTGLSGTGIVVNV--TV-------------------AVVVAV 99
YAV A +G+L+W+QNL LTGL+GTG++VNV TV AVV+AV
Sbjct: 125 YAVKATDGSLVWKQNLQMLTGLNGTGLIVNVNWTVSRSTPTMADDMLIVGIYGPAVVIAV 184
Query: 100 SRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDV 159
++ G LVWST++D P +TMSG+ + GAFYVG SS+EE L +QCC FRGSL+KLD+
Sbjct: 185 EQATGRLVWSTRLDSNPTGIVTMSGTFHKGAFYVGTSSVEEELSIEQCCVFRGSLSKLDI 244
Query: 160 RNGRIIWQTYMLPDNGGKRGGYSGAAVWGSSPAIDVIRR-------------------QK 200
+ G I+WQT+ LPDN GKRG Y+GAA+WGSSP+IDV R Q+
Sbjct: 245 KTGVILWQTFTLPDNHGKRGEYAGAAIWGSSPSIDVRRNLVYVATGNLYSAPLNIRECQE 304
Query: 201 QNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPP 260
Q N T PT DQCI D ++NSI+A ++DSG+I W + LGGYD+++F C + P+CPP
Sbjct: 305 QQNNQTAPTQTDQCIEPDNHSNSILAFELDSGKIKWYRQLGGYDLWFFACNNLSTPNCPP 364
Query: 261 GPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDIIWFKLAGPGGREGG 320
GP+ DADFGEAP++L+I+ NG DVV AVQKSGFAWA DR +G ++W AGPGG GG
Sbjct: 365 GPSPDADFGEAPIMLSINLNGTMWDVVSAVQKSGFAWALDRYNGSLVWSTEAGPGGLTGG 424
Query: 321 GVWGAATDGRRVYTNIVNND--------------------------RIIWSTADPSNETA 354
G WGAATD +RVYTNI N+D +I+WSTADPSN T+
Sbjct: 425 GTWGAATDNKRVYTNIANSDSKNFTLKPSEKNTTAGGWVAMDASTGKILWSTADPSNATS 484
Query: 355 HGPVTVVNGVLFAGSVSA-------------------NGSTVYGGVPASYGCIYLGNGYT 395
+GPVT+ NGVLF GS G+TVYGG+ S GCIYLGNGY
Sbjct: 485 NGPVTIANGVLFGGSTHPTGPIYAMDARSGKILWSHNTGATVYGGISVSNGCIYLGNGYK 544
Query: 396 VSLGKFHPTWTPGTSLYAFC 415
V+LG F ++T GTSL+AFC
Sbjct: 545 VNLGSFTASFTNGTSLFAFC 564
>gi|356529945|ref|XP_003533546.1| PREDICTED: quinohaemoprotein ethanol dehydrogenase type-1-like
[Glycine max]
Length = 580
Score = 453 bits (1166), Expect = e-125, Method: Compositional matrix adjust.
Identities = 256/501 (51%), Positives = 322/501 (64%), Gaps = 87/501 (17%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAGKDISATPAVANGVVYFPSWNGYL 60
WLNHGG++ NRRYA E I+ TV NL L+W FYAGKDI+ATPA+ +G +YFP WNG +
Sbjct: 80 WLNHGGNIYNRRYASMEHKISVETVSNLSLKWKFYAGKDITATPAIFDGTLYFPCWNGDI 139
Query: 61 YAVNAFNGALIWEQNLSKLTGLSGTGIV--VNVTVA--------------------VVVA 98
+AV A +G+L+W+QNL LTGLS TG V VN TVA VV+A
Sbjct: 140 FAVRAKDGSLVWKQNLGNLTGLSATGFVAGVNWTVARATPTIAEVDLLIFGIYGPAVVIA 199
Query: 99 VSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLD 158
V RS G+LVW T +D S +TMSG+ Y GA+YVG SSLEE L ++CCTFRGS +KLD
Sbjct: 200 VKRSTGDLVWQTPLDSHNSSVVTMSGTYYKGAYYVGASSLEE-LTTEECCTFRGSFSKLD 258
Query: 159 VRNGRIIWQTYMLPDNGGKRGGYSGAAVWGSSPAIDVIRR-------------------Q 199
+++G I+WQT+MLPDN G+RG Y+GAAVWGSSP+ID R Q
Sbjct: 259 IQSGVILWQTFMLPDNHGQRGEYAGAAVWGSSPSIDASRNHIYIATGNLYSAPLDILECQ 318
Query: 200 KQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCP 259
++ N T+PTHPD+C+ D +++SI+ALD+D G+I W + LGGYD+++ +C + P+CP
Sbjct: 319 ERENNVTQPTHPDECVEPDNHSDSILALDLDDGKIKWYRQLGGYDVWFLSCNNLSTPNCP 378
Query: 260 PGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDIIWFKLAGPGGREG 319
PGPN DADFGEAPM+LTI NG +D VVAVQKSGFAWA RD+G++IW AGPGG G
Sbjct: 379 PGPNPDADFGEAPMMLTIDVNGTKQDTVVAVQKSGFAWALHRDNGNLIWSTEAGPGGLAG 438
Query: 320 GGVWGAATDGRRVYTNIVNND--------------------------RIIWSTADPSNET 353
GG WGAATD RVYTNI N+D +I+WS A+PSN T
Sbjct: 439 GGTWGAATDKERVYTNIANSDGQNFTLKPSNKTTTSGGWVAMEASSGKILWSIANPSNAT 498
Query: 354 AHGPVTVVNGVLFAGSVSAN-------------------GSTVYGGVPASYGCIYLGNGY 394
A+GPVTV NGV+FAGS + GSTVYGG+ S GCIY GNGY
Sbjct: 499 ANGPVTVANGVVFAGSTNQKGPIYAINGKTGKIEWSYETGSTVYGGMSVSDGCIYFGNGY 558
Query: 395 TVSLGKFHPTWTPGTSLYAFC 415
+ +G +T GTSL+AFC
Sbjct: 559 KIGVGLNLGNFTAGTSLFAFC 579
>gi|449459518|ref|XP_004147493.1| PREDICTED: polyvinylalcohol dehydrogenase-like [Cucumis sativus]
Length = 538
Score = 453 bits (1166), Expect = e-125, Method: Compositional matrix adjust.
Identities = 253/507 (49%), Positives = 320/507 (63%), Gaps = 93/507 (18%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAGKDISATPAVANGVVYFPSWNGYL 60
WLNHGGDL NRRYA E I+P TV +LRL+W FYAG DIS TPA+ +GV+YFPSWNG+L
Sbjct: 32 WLNHGGDLKNRRYANRETKISPSTVSHLRLKWEFYAGGDISVTPAIYDGVIYFPSWNGFL 91
Query: 61 YAVNAFNGALIWEQNLSKLTGLSGTGIVVNVTV---------------------AVVVAV 99
YAV A NGAL+W++NL KLTG + TG ++NV AVV+ V
Sbjct: 92 YAVRASNGALLWKKNLQKLTGFNNTGFILNVNSTVSRSTPTVAGELVVVGIYGPAVVIGV 151
Query: 100 SRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDV 159
RS G+LVW T++D + RS ITMSG+ Y G+F++G SSLEE LP DQCCTFRGS +KLD
Sbjct: 152 KRSTGKLVWCTRLDYKNRSFITMSGTYYKGSFFIGTSSLEEGLPVDQCCTFRGSFSKLDA 211
Query: 160 RNGRIIWQTYMLPDNGGKRGGYSGAAVWGSSPAIDVIR--------------------RQ 199
+ G I+WQT+MLPDN G YSGAA+WGSSP+ID +R ++
Sbjct: 212 KTGAILWQTFMLPDNHGDTEQYSGAAIWGSSPSIDPLRNLVYIATGNLYSAPLRIRECQE 271
Query: 200 KQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCP 259
+QNNQ T+PT PD+CI + ++NSI+ALD+DSG I W K LGGYD+++ C +P CP
Sbjct: 272 RQNNQ-TEPTLPDKCIEPENHSNSILALDLDSGDIKWYKQLGGYDVWFGACNWHLDPRCP 330
Query: 260 PGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDIIWFKLA------G 313
PGP+ D+DFGE+PM+L++ RD+VVAVQKSGFAWA DRD+G+++W K + G
Sbjct: 331 PGPSSDSDFGESPMMLSVFVRNMKRDIVVAVQKSGFAWALDRDNGNLVWSKESFIPLEAG 390
Query: 314 PGGREGGGVWGAATDGRRVYTNIVNNDR--------------------------IIWSTA 347
PGG GGG+WGAATD +RVYTNI N+ IIWSTA
Sbjct: 391 PGGLGGGGMWGAATDEKRVYTNIANSQHKNFTLKPTNKTTIAGGWVAMEAKTGDIIWSTA 450
Query: 348 DPSNETAHGPVTVVNGVLFAGSV-------------------SANGSTVYGGVPASYGCI 388
+ TA GPVT+ NGV+FAGS G +VYGG+ S GCI
Sbjct: 451 NLKEATAPGPVTIANGVVFAGSTYRQGPIYAMDAKTGKIVWSYETGGSVYGGISVSKGCI 510
Query: 389 YLGNGYTVSLGKFHPTWTPGTSLYAFC 415
Y+GNGY +G + +T GTSLYAFC
Sbjct: 511 YVGNGYKEHIGFVNKNYTAGTSLYAFC 537
>gi|296082871|emb|CBI22172.3| unnamed protein product [Vitis vinifera]
Length = 1752
Score = 452 bits (1163), Expect = e-124, Method: Compositional matrix adjust.
Identities = 248/500 (49%), Positives = 313/500 (62%), Gaps = 87/500 (17%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAGKDISATPAVANGVVYFPSWNGYL 60
WLNHGGDL NRRYA E I P T LRL+W FYAG DI+ + NG +YFPSWNGYL
Sbjct: 1253 WLNHGGDLYNRRYASTETEIGPETTSKLRLKWEFYAGNDITV-ETIFNGTLYFPSWNGYL 1311
Query: 61 YAVNAFNGALIWEQNLSKLTGLSGTGIVVNV--TV-------------------AVVVAV 99
YAV A +G+L+W+QNL LTGL+ TG V NV TV AVV+ V
Sbjct: 1312 YAVKASDGSLVWKQNLQNLTGLNATGFVTNVNWTVSRSTPTIAGDMLIIGIYGPAVVIGV 1371
Query: 100 SRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDV 159
R+ G L WST+++ P +TMSG+ + G+FYVG SS EE L QCC FRGSL+KLD+
Sbjct: 1372 DRATGRLAWSTRLESNPAGAVTMSGTFHNGSFYVGTSSFEEKLSIKQCCIFRGSLSKLDI 1431
Query: 160 RNGRIIWQTYMLPDNGGKRGGYSGAAVWGSSPAIDVIRR-------------------QK 200
+ G I+WQTY+LPDN G++G Y+G A+WGSSP+I V+R Q+
Sbjct: 1432 KTGTILWQTYVLPDNHGEKGEYAGGAIWGSSPSIGVLRNFVYIATGNLYSAPLNIRECQE 1491
Query: 201 QNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPP 260
Q N T PT PD CI D ++NSI+A D+DSG+I W + LGGYD+++ C + P+CPP
Sbjct: 1492 QQNNQTVPTQPDPCIEPDNHSNSILAFDLDSGKIKWYRQLGGYDLWFRACNNLSTPNCPP 1551
Query: 261 GPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDIIWFKLAGPGGREGG 320
GPN DADFGEAPM+L+I NG D+VVAVQKSGFAWA DRD G ++W+ AGPGG GG
Sbjct: 1552 GPNPDADFGEAPMMLSIYLNGTMPDIVVAVQKSGFAWALDRDDGSLVWYTEAGPGGVTGG 1611
Query: 321 GVWGAATDGRRVYTNIVNND--------------------------RIIWSTADPSNETA 354
G WGAATDG+RVYTNI+N+D + +WSTA+PSN +
Sbjct: 1612 GTWGAATDGKRVYTNILNSDGKNFTLKPSNTITNAGGWVAMDANTGKTLWSTANPSNAST 1671
Query: 355 HGPVTVVNGVLFAGSVSA-------------------NGSTVYGGVPASYGCIYLGNGYT 395
+GPVT+ NGVLFAGS G++V+GG S GCIY+G+GY
Sbjct: 1672 NGPVTIANGVLFAGSTHPTGPMYAMEAASGRILWSHNTGASVFGGASVSNGCIYVGSGYN 1731
Query: 396 VSLGKFHPTWTPGTSLYAFC 415
V+ G H ++T GTSL+AFC
Sbjct: 1732 VNSGP-HFSFTGGTSLFAFC 1750
Score = 447 bits (1150), Expect = e-123, Method: Compositional matrix adjust.
Identities = 255/499 (51%), Positives = 317/499 (63%), Gaps = 89/499 (17%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAGKDISATPAVANGVVYFPSWNGYL 60
WLNHGGDL NRRYA E I+P T LRL+W FYAGKDI+ATPA+ NG +YFPSWNGYL
Sbjct: 702 WLNHGGDLYNRRYASTETEISPETTSKLRLKWEFYAGKDITATPAIFNGTLYFPSWNGYL 761
Query: 61 YAVNAFNGALIWEQNLSKLTGLSGTGIVVNV--TV-------------------AVVVAV 99
YAV A +G+L+W+QNL LTGL+ TG V NV TV AVV+ V
Sbjct: 762 YAVKASDGSLVWKQNLQNLTGLNATGFVTNVNWTVSRSTPTIAGDMLIIGIYGPAVVIGV 821
Query: 100 SRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDV 159
++ G LVWST ++ P +TMSG+ + G+FYVG SSLEE L +QCC FRGSL+KLD+
Sbjct: 822 DQATGRLVWSTWLESNPAGVVTMSGTFHKGSFYVGTSSLEELLGIEQCCIFRGSLSKLDI 881
Query: 160 RNGRIIWQTYMLPDNGGKRGGYSGAAVWGSSPAIDVIRR-------------------QK 200
+ G I+WQT+ LPDN G+RG Y+GAA+WGSSP+IDV R Q+
Sbjct: 882 KTGAILWQTFTLPDNHGERGEYAGAAIWGSSPSIDVQRNLVYVATGNLYSAPLNIQECQE 941
Query: 201 QNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPP 260
Q N T PT PDQCI D ++NSI+A D+DSG+I W + LGGYD+++ C + P+CPP
Sbjct: 942 QQNNQTVPTQPDQCIEPDNHSNSILAFDLDSGKIKWYRQLGGYDVWFLACNNLSTPNCPP 1001
Query: 261 GPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDIIWFKLAGPGGREGG 320
GPN DADFGEAPM+L+I NG RD+VVAVQKSGFAWA DR G ++W AGPGG GG
Sbjct: 1002 GPNPDADFGEAPMMLSIYVNGTMRDIVVAVQKSGFAWALDRYDGSLVWSTEAGPGGLAGG 1061
Query: 321 GVWGAATDGRRVYTNIVN----------NDRI----------------IWSTADPSNETA 354
G WGA TDG+RVYTNIVN +D I +WSTA+PSN T+
Sbjct: 1062 GTWGATTDGKRVYTNIVNSYGKNFTLKPSDTITTTGGWVAMDANTGETLWSTANPSNATS 1121
Query: 355 HGPVTVVNGVLFAGSVSA-------------------NGSTVYGGVPASYGCIYLGNGYT 395
+GPVT+ NGVLFAGS G++VYGG S GCIY+G+GY+
Sbjct: 1122 NGPVTIANGVLFAGSTHPTGPMYAMEAASGRILWSHNTGASVYGGASVSSGCIYVGSGYS 1181
Query: 396 ---VSLGKFHPTWTPGTSL 411
+ + FH + T GT+L
Sbjct: 1182 KLILQISTFH-SLTEGTAL 1199
Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust.
Identities = 239/485 (49%), Positives = 300/485 (61%), Gaps = 88/485 (18%)
Query: 2 LNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAGKDISATPAVANGVVYFPSWNGYLY 61
L + DL RYA E I+P T LRL+W FYAGKDI+ATPA+ NG +YFPSWNGYLY
Sbjct: 176 LENSKDL---RYASTETEISPETTSKLRLKWEFYAGKDITATPAIFNGTLYFPSWNGYLY 232
Query: 62 AVNAFNGALIWEQNLSKLTGLSGTGIVVNV--TV-------------------AVVVAVS 100
AV A +G+L+W+QNL LTGL+ TG V NV TV AVV+ V
Sbjct: 233 AVKASDGSLVWKQNLQNLTGLNATGFVTNVNWTVSRSTPTIAGDMLIIGIYGPAVVIGVD 292
Query: 101 RSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVR 160
++ G L+WST+++ P + MSG+ + G+FYVG SSLEE L +QCC FRGSL+KLD++
Sbjct: 293 QATGRLMWSTRLESNPAGVVAMSGTFHKGSFYVGTSSLEELLGIEQCCIFRGSLSKLDIK 352
Query: 161 NGRIIWQTYMLPDNGGKRGGYSGAAVWGSSPAIDVIRR-------------------QKQ 201
G I+WQT+ LPDN G+RG Y+GAA+WGSSP+IDV R Q+Q
Sbjct: 353 TGAILWQTFTLPDNHGERGEYAGAAIWGSSPSIDVQRNLVYVATGNLYSAPLNIQECQEQ 412
Query: 202 NNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPG 261
N T PT PDQCI D ++NSI+A D+DSG+I W + LGGYD+++ C + P+CP G
Sbjct: 413 QNNQTVPTQPDQCIEPDNHSNSILAFDLDSGKIKWYRQLGGYDVWFLACSNLSTPNCPSG 472
Query: 262 PNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDIIWFKLAGPGGREGGG 321
PN DADFGEAPM+L I NG D+VVAVQKSGFAWA DR G ++W AGPGG GGG
Sbjct: 473 PNQDADFGEAPMMLRIYLNGTMLDIVVAVQKSGFAWALDRYDGSLVWSTEAGPGGLTGGG 532
Query: 322 VWGAATDGRRVYTNIVNND--------------------------RIIWSTADPSNETAH 355
WGAATDG+RVYTNIVN+ +WSTA+PSN T++
Sbjct: 533 TWGAATDGKRVYTNIVNSSGQNFTLKPSDAITTAGGWVAMDANTGETLWSTANPSNATSN 592
Query: 356 GPVTVVNGVLFAGSVSA-------------------NGSTVYGGVPASYGCIYLGNGYTV 396
GPVT+ NGVLFAGS G++VYGG S GCIY+G+GY+V
Sbjct: 593 GPVTIANGVLFAGSTHPTGPMYAMEATSGRILWSHNTGASVYGGASVSSGCIYVGSGYSV 652
Query: 397 SLGKF 401
+ G
Sbjct: 653 NFGTL 657
>gi|296082872|emb|CBI22173.3| unnamed protein product [Vitis vinifera]
Length = 469
Score = 449 bits (1155), Expect = e-123, Method: Compositional matrix adjust.
Identities = 247/481 (51%), Positives = 310/481 (64%), Gaps = 92/481 (19%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAGKDISATPAVANGVVYFPSWNGYL 60
WLNHGGDL NRRYA E I+P T LRL+W FYAG+DI+ATPA+ NG +YFPSWNGYL
Sbjct: 13 WLNHGGDLYNRRYASTETKISPETASKLRLKWEFYAGQDITATPAIFNGTLYFPSWNGYL 72
Query: 61 YAVNAFNGALIWEQNLSKLTGLSGTGIVVNV--TV-------------------AVVVAV 99
YAV A +G+L+W+QNL KLTGL+ TG V NV TV AVV+A+
Sbjct: 73 YAVKASDGSLVWKQNLQKLTGLNATGFVNNVNWTVSRATPTIAGDMLIIGIYGPAVVIAL 132
Query: 100 SRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDV 159
++ G LVWSTQ+D P +TMSG+ +MG+FYVG SSLEE L +QCC FRGSL+KLD+
Sbjct: 133 KQATGRLVWSTQLDSNPAGVVTMSGTFHMGSFYVGTSSLEEGLSIEQCCIFRGSLSKLDI 192
Query: 160 RNGRIIWQTYMLPDNGGKRGGYSGAAVWGSSPAIDVIRRQKQNNQTTKPTHPDQCISSDI 219
+ G ++WQT+ LPDN G+RG Y+GAA+WGSSP+IDV R
Sbjct: 193 KTGALLWQTFTLPDNHGERGEYAGAAIWGSSPSIDVRR---------------------- 230
Query: 220 YANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTIST 279
++V + DS +I W + LGGYD+++ C + P+CPPGPN DADFGEAPM+L+I
Sbjct: 231 ---NLVYVATDSDKIKWYRQLGGYDVWFLACNNLSTPNCPPGPNPDADFGEAPMMLSIYV 287
Query: 280 NGRFRDVVVAVQKSGFAWAFDRDSGDIIWFKLAGPGGREGGGVWGAATDGRRVYTNIVNN 339
NG RD+V AVQKSGFAWA DR++G ++W AGPGG GGG WGAATDG RVYTNIVN+
Sbjct: 288 NGTMRDIVTAVQKSGFAWALDRNNGSLVWATEAGPGGLSGGGTWGAATDGIRVYTNIVNS 347
Query: 340 D--------------------------RIIWSTADPSNETAHGPVTVVNGVLFAGSVSA- 372
D +I+WSTA+PSN T++GPVT+ NGVLFAGS A
Sbjct: 348 DSKNFTLKPSEKNTTAGGWVAIEAGTGKILWSTANPSNATSNGPVTIANGVLFAGSTHAT 407
Query: 373 ------------------NGSTVYGGVPASYGCIYLGNGYTVSLGKFHPTWTPGTSLYAF 414
G+TV+GG S GCIY+G+GY V++G F P +T GTSL+AF
Sbjct: 408 GLVYAMDAASGKILWSHNTGATVFGGASVSSGCIYVGSGYHVNIGSFFP-FTSGTSLFAF 466
Query: 415 C 415
C
Sbjct: 467 C 467
>gi|124360970|gb|ABN08942.1| Quinonprotein alcohol dehydrogenase-like [Medicago truncatula]
Length = 539
Score = 446 bits (1147), Expect = e-122, Method: Compositional matrix adjust.
Identities = 252/504 (50%), Positives = 315/504 (62%), Gaps = 89/504 (17%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAGKDISATPAVANGVVYFPSWNGYL 60
WLNHGGD+ NRRYA E IN T+ NL L+W F AGKDI+ATPA+ NG +YFPSWNG +
Sbjct: 35 WLNHGGDIYNRRYASKEHKINLKTISNLTLKWEFNAGKDITATPAIFNGTIYFPSWNGLI 94
Query: 61 YAVNAFNGALIWEQNLSKLTGLSGTGIVVNV--TVA---------------------VVV 97
+AV +G L+W++NL+KLTGL G + NV TVA VV+
Sbjct: 95 FAVREIDGTLVWKKNLTKLTGLDSIGFIANVNWTVARATPTIAVDEDLVIVGIYGPAVVI 154
Query: 98 AVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKL 157
AV+RS G+L+W T++D +TMSG+ Y GA+YVG SSLEE A++CCTFRGS +KL
Sbjct: 155 AVNRSTGDLIWQTRLDSNDAGVVTMSGTYYKGAYYVGSSSLEELKSAEECCTFRGSFSKL 214
Query: 158 DVRNGRIIWQTYMLPDNGGKRGGYSGAAVWGSSPAIDVIR-----------------RQK 200
D+++G I+W+TYMLPDN GKRG YSG A+WGSSP ID R RQ
Sbjct: 215 DIKSGAILWKTYMLPDNNGKRGEYSGGAIWGSSPPIDASRNHIYIATGNLYSAPLHIRQC 274
Query: 201 Q----NNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNP 256
Q N T+PT PDQC+ + ++NSI+ALD+ +G I W LGGYD+++ C + P
Sbjct: 275 QDEENNKNLTRPTQPDQCVEPENHSNSILALDLYNGEIKWYHQLGGYDVWFLACNDLSTP 334
Query: 257 DCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDIIWFKLAGPGG 316
+CPPGPN DADFGEAPM+LTI NG +D+VVAVQKSGFAWA R +GDIIW AGPGG
Sbjct: 335 NCPPGPNPDADFGEAPMMLTIDVNGTKQDIVVAVQKSGFAWALHRHNGDIIWSTEAGPGG 394
Query: 317 REGGGVWGAATDGRRVYTNIVNND--------------------------RIIWSTADPS 350
GGG WGAATD RVYTNI N++ +I+W+ A+PS
Sbjct: 395 VAGGGTWGAATDKERVYTNIANSNAKNFTLKPSNKTITSGGWVAMEASSGKILWAIANPS 454
Query: 351 NETAHGPVTVVNGVLFAGSVS-------------------ANGSTVYGGVPASYGCIYLG 391
N TA+GPV+V NG++FAGS + G+TVYGG+ + GCIYLG
Sbjct: 455 NATANGPVSVANGIVFAGSANRKGPIYAINGKTGEILWSYETGATVYGGISINNGCIYLG 514
Query: 392 NGYTVSLGKFHPTWTPGTSLYAFC 415
NGYTV L T GTSLYAFC
Sbjct: 515 NGYTVGLATVIGGLTGGTSLYAFC 538
>gi|357501727|ref|XP_003621152.1| Quinohaemoprotein ethanol dehydrogenase type-1 [Medicago
truncatula]
gi|355496167|gb|AES77370.1| Quinohaemoprotein ethanol dehydrogenase type-1 [Medicago
truncatula]
Length = 569
Score = 433 bits (1113), Expect = e-118, Method: Compositional matrix adjust.
Identities = 243/487 (49%), Positives = 306/487 (62%), Gaps = 89/487 (18%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAGKDISATPAVANGVVYFPSWNGYL 60
WLNHGGD+ NRRYA E IN T+ NL L+W F AGKDI+ATPA+ NG +YFPSWNG +
Sbjct: 35 WLNHGGDIYNRRYASKEHKINLKTISNLTLKWEFNAGKDITATPAIFNGTIYFPSWNGLI 94
Query: 61 YAVNAFNGALIWEQNLSKLTGLSGTGIVVNV--TVA---------------------VVV 97
+AV +G L+W++NL+KLTGL G + NV TVA VV+
Sbjct: 95 FAVREIDGTLVWKKNLTKLTGLDSIGFIANVNWTVARATPTIAVDEDLVIVGIYGPAVVI 154
Query: 98 AVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKL 157
AV+RS G+L+W T++D +TMSG+ Y GA+YVG SSLEE A++CCTFRGS +KL
Sbjct: 155 AVNRSTGDLIWQTRLDSNDAGVVTMSGTYYKGAYYVGSSSLEELKSAEECCTFRGSFSKL 214
Query: 158 DVRNGRIIWQTYMLPDNGGKRGGYSGAAVWGSSPAIDVIR-----------------RQK 200
D+++G I+W+TYMLPDN GKRG YSG A+WGSSP ID R RQ
Sbjct: 215 DIKSGAILWKTYMLPDNNGKRGEYSGGAIWGSSPPIDASRNHIYIATGNLYSAPLHIRQC 274
Query: 201 Q----NNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNP 256
Q N T+PT PDQC+ + ++NSI+ALD+ +G I W LGGYD+++ C + P
Sbjct: 275 QDEENNKNLTRPTQPDQCVEPENHSNSILALDLYNGEIKWYHQLGGYDVWFLACNDLSTP 334
Query: 257 DCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDIIWFKLAGPGG 316
+CPPGPN DADFGEAPM+LTI NG +D+VVAVQKSGFAWA R +GDIIW AGPGG
Sbjct: 335 NCPPGPNPDADFGEAPMMLTIDVNGTKQDIVVAVQKSGFAWALHRHNGDIIWSTEAGPGG 394
Query: 317 REGGGVWGAATDGRRVYTNIVNND--------------------------RIIWSTADPS 350
GGG WGAATD RVYTNI N++ +I+W+ A+PS
Sbjct: 395 VAGGGTWGAATDKERVYTNIANSNAKNFTLKPSNKTITSGGWVAMEASSGKILWAIANPS 454
Query: 351 NETAHGPVTVVNGVLFAGSVS-------------------ANGSTVYGGVPASYGCIYLG 391
N TA+GPV+V NG++FAGS + G+TVYGG+ + GCIYLG
Sbjct: 455 NATANGPVSVANGIVFAGSANRKGPIYAINGKTGEILWSYETGATVYGGISINNGCIYLG 514
Query: 392 NGYTVSL 398
NGYTV L
Sbjct: 515 NGYTVGL 521
>gi|357501719|ref|XP_003621148.1| Quinohaemoprotein ethanol dehydrogenase type-1 [Medicago
truncatula]
gi|355496163|gb|AES77366.1| Quinohaemoprotein ethanol dehydrogenase type-1 [Medicago
truncatula]
Length = 528
Score = 431 bits (1108), Expect = e-118, Method: Compositional matrix adjust.
Identities = 245/503 (48%), Positives = 313/503 (62%), Gaps = 90/503 (17%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAGKDISATPAVANGVVYFPSWNGYL 60
W+NHGGDL NRRYAY E IN TV L L+W FYA KDI+ATP + NG +YFPSWNG +
Sbjct: 27 WINHGGDLFNRRYAYKEQKINIETVPKLSLKWKFYANKDITATPTIYNGTIYFPSWNGNI 86
Query: 61 YAVNAFNGALIWEQNLSKLTGLSGTGIVVNV---------TVA------------VVVAV 99
YA+ +G+L+W+QNL KLTGL+ TG ++N TVA VV+ +
Sbjct: 87 YAIKQVDGSLVWKQNLEKLTGLNTTGFIINANWTLARATPTVAEDLLIVGIYGPAVVIGL 146
Query: 100 SRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDV 159
R GELVW T +D P +TMSG+ Y G++YVG SSLEE CC FRGSL KLD
Sbjct: 147 ERRTGELVWLTHLDNHPAGVVTMSGTYYNGSYYVGTSSLEEGATIKDCCIFRGSLVKLDA 206
Query: 160 RNGRIIWQTYMLPDNGGKRGGYSGAAVWGSSPAIDVIRR--------------------Q 199
+ G I+W+TYMLPDN GK G Y+GAA+WGSSP+IDV R+ +
Sbjct: 207 QTGDILWKTYMLPDNNGKIGAYAGAAIWGSSPSIDVYRKHVYIATGNLYSAPKNVLECQE 266
Query: 200 KQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCP 259
+QNNQTT P D+C+ + ++NSI+ALD+DSG I W K LGGYD+++ +C + +CP
Sbjct: 267 RQNNQTT-PIEQDKCVEPENHSNSILALDLDSGNIKWYKQLGGYDVWFVSCNNASISNCP 325
Query: 260 PGPNL-DADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDIIWFKLAGPGGRE 318
P ++ DADFGEAPM+LT NG +D+VVAVQKSGFAWA DRD+G ++WF AGPGG
Sbjct: 326 PQGSIPDADFGEAPMMLTTHVNGTKKDIVVAVQKSGFAWALDRDNGTLLWFTEAGPGGLA 385
Query: 319 GGGVWGAATDGRRVYTNIVNND--------------------------RIIWSTADPS-N 351
GGG +GAATD +R+YTNI N+D I+WSTA+PS N
Sbjct: 386 GGGTFGAATDEKRIYTNIANSDAKIFKLLPSNMNTTSGGWVAMDASNGTILWSTANPSIN 445
Query: 352 ETAHGPVTVVNGVLFAGSVS-------------------ANGSTVYGGVPASYGCIYLGN 392
TA GPV+V N V+F GS G++VYGG+ S GC+Y+G+
Sbjct: 446 STASGPVSVANEVVFVGSTDRLGHIYAINGRNGHILWFYETGASVYGGMSISNGCVYVGH 505
Query: 393 GYTVSLGKFHPTWTPGTSLYAFC 415
GY VSLG F+ +T GTSL+AFC
Sbjct: 506 GYNVSLG-FYSNYTGGTSLFAFC 527
>gi|168008902|ref|XP_001757145.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162691643|gb|EDQ78004.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 616
Score = 343 bits (880), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 192/445 (43%), Positives = 253/445 (56%), Gaps = 77/445 (17%)
Query: 1 WLNHGGD-LNNRRYAYGEVLINPVTVRNLRLRWSFYAGKDISATPAVANGVVYFPSWNGY 59
W +HGG + N R A+ E I+P +V++ L+W F G D++ATP+V+ G+VYFPSWNG
Sbjct: 97 WPSHGGPGIINWRNAFRERKIDPDSVQSYDLKWEFITGGDVTATPSVSRGLVYFPSWNGK 156
Query: 60 LYAVNAFNGALIWEQNLSKLTG----LSGTGIVVNV-----------------------T 92
L+AV A G L+WEQNL++LT + G V + +
Sbjct: 157 LFAVRARTGKLVWEQNLTQLTAGIPDIEGKNFVTKLFGYPILSRSTPVIVGNLLIVGLSS 216
Query: 93 VAVVVAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRG 152
V+AV RS G VWST +D P + ITMSG+V+ GA+Y+G SSLEE + + CCTF+G
Sbjct: 217 PGAVIAVKRSTGHHVWSTVLDSHPYALITMSGTVFEGAYYIGTSSLEE-VRQEGCCTFQG 275
Query: 153 SLAKLDVRNGRIIWQTYMLPDNGGKRGGYSGAAVWGSSPAIDVIRR-------------- 198
KLD+ G+I+W M PDNGGK G YSG A+W S P ID RR
Sbjct: 276 RFFKLDLATGKILWSVRMQPDNGGKPGLYSGNAIWASGPPIDTTRRLVYIATGNSYSAPP 335
Query: 199 -----QKQN-NQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLV 252
+ QN T PT D C++ Y SIVA++ID+G+++WA+ LGG D+F CL
Sbjct: 336 DVEECRTQNPANVTNPTLEDPCVAEGDYVTSIVAINIDTGKVSWARNLGGSDVFVLACLA 395
Query: 253 -PNNPDCPPGPNLDADFGEAPMLLTISTNG-RFRDVVVAVQKSGFAWAFDRDSGDIIWFK 310
P +CP P D DFGE+PMLLTI G RDV + QKSGF WA DR +GD++W
Sbjct: 396 NPTGGNCPESPGPDYDFGESPMLLTIKPKGGESRDVAIVGQKSGFVWALDRSTGDLVWVT 455
Query: 311 LAGPGGREGGGVWGAATDGRRVYTNIVNNDR--------------------------IIW 344
AGPGG GG WG ATDG+RV+T+I+NN+R I+W
Sbjct: 456 AAGPGGVLGGSSWGMATDGKRVFTHIINNERAEFKLLPSTEVVRRGGWVAMDAATGQILW 515
Query: 345 STADPSNETAHGPVTVVNGVLFAGS 369
STA+P N T + P++ NGVLF GS
Sbjct: 516 STANPDNFTTNPPMSHANGVLFGGS 540
>gi|302759849|ref|XP_002963347.1| hypothetical protein SELMODRAFT_438505 [Selaginella moellendorffii]
gi|300168615|gb|EFJ35218.1| hypothetical protein SELMODRAFT_438505 [Selaginella moellendorffii]
Length = 679
Score = 334 bits (856), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 213/493 (43%), Positives = 277/493 (56%), Gaps = 88/493 (17%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAGKDISATPAVANGVVYFPSWNGYL 60
W++HGGDL NRR+A E LI+ + +L +WSF AG DISATPA+ + VVYFPSWNG +
Sbjct: 182 WISHGGDLKNRRFAEDEHLISVWSAPHLSEKWSFDAGADISATPAIYDCVVYFPSWNGLV 241
Query: 61 YAVNAFNGALIWEQNLSKLTG---LSGTGIVVNVTV--------AVVVAVSRSNGELVW- 108
+AV +G L+W NL+++TG LS T V + A VVA+ R +G +VW
Sbjct: 242 FAVT-IHGELLWRFNLTEITGVATLSRTTPAVTEELLLYGLLGPARVVALHRKSGRMVWM 300
Query: 109 STQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQT 168
S +D P ++ITMSG+ Y GAFYVG+SSL+E + A CCTF+GS KLD++ G+ IW+T
Sbjct: 301 SEDLDETPLARITMSGTAYDGAFYVGMSSLQELVEA-ACCTFQGSFQKLDLKTGKRIWRT 359
Query: 169 YMLPDNGGKRGGYSGAAVWGSSPAIDVIRRQK---QNNQTTKPTHPDQCI-----SSDIY 220
YM+P+N + G VWGSSP+ID R N P+ C+ SSD Y
Sbjct: 360 YMVPENSS----FYGVTVWGSSPSIDPKRGLAFIGTGNLYQIPSDVQDCLNRNANSSDCY 415
Query: 221 A-----NSIVALDIDSGRIAWAKPLGGYDIFYFTC---LVPNNPDCPPGPNLDADFGEAP 272
+++VA+++ G I W LGG D++ C P N PGP D DFGE+P
Sbjct: 416 PPGVCDDAVVAVNMADGEIRWCNRLGGNDVWRLACDTNPPPANCPPEPGP--DYDFGESP 473
Query: 273 MLLTIST---NGRFRDVVVAVQKSGFAWAFDRDSGDIIWFKLAGPGGREGGGVWGAATDG 329
MLLTI + +F+D+VV QKSG WA DRD G ++W AGPGG GG +WGAATD
Sbjct: 474 MLLTIPSRYSKNKFQDIVVTGQKSGIVWAHDRDDGSLVWETTAGPGGSVGGAIWGAATDN 533
Query: 330 RRVYTNIVNND--------------------------RIIWSTADPSNETAHGPVTVVNG 363
RVYTNI N+D RI WSTA+P A+GPVTV NG
Sbjct: 534 HRVYTNIANSDRATFQLVPSGQSTTAGGWVAMDAATGRIEWSTANPHGARAYGPVTVANG 593
Query: 364 VLFAGSVSAN-------------------GSTVYGGVPASYGCIYLGNGYTVSLGKFHPT 404
V+F GS + GSTVYGG +GC ++G GY S P
Sbjct: 594 VVFCGSFDKDGHVLALDAESGRILWERTTGSTVYGGPSVGHGCCFIGTGY--SRAPLAPA 651
Query: 405 W--TPGTSLYAFC 415
+ TPG+ LYAFC
Sbjct: 652 FGGTPGSELYAFC 664
>gi|302755102|ref|XP_002960975.1| hypothetical protein SELMODRAFT_437427 [Selaginella moellendorffii]
gi|300171914|gb|EFJ38514.1| hypothetical protein SELMODRAFT_437427 [Selaginella moellendorffii]
Length = 504
Score = 330 bits (846), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 197/488 (40%), Positives = 267/488 (54%), Gaps = 83/488 (17%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAGKDISATPAVANGVVYFPSWNGYL 60
W NHGGD+ NRR+ E I+P L +W F G +SATPA+ GV+Y P+W+G +
Sbjct: 25 WTNHGGDITNRRFQEKEHKISPQNAHTLAQKWRFVTGPFVSATPAIYKGVIYVPTWSGLV 84
Query: 61 YAVNAFNGALIWEQNLSKLTGLSGT------GIVVNVTV------AVVVAVSRSNGELVW 108
+AV + G+L+W NL+++TGLSG + + + A VVA+ R G+LVW
Sbjct: 85 FAV-SMQGSLVWRVNLTQITGLSGVISRTSPAVTKELVILGLLGPAKVVALERETGKLVW 143
Query: 109 -STQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQ 167
S +++ P ++ITMSG+ AFYVG+SS +E + CCTF+GS KL ++ G IW+
Sbjct: 144 ISQELEETPLAKITMSGTANKDAFYVGISSDQE-VNDTICCTFQGSFQKLSLKTGARIWK 202
Query: 168 TYMLPDNGGKRGGYSGAAVWGSSPAIDVIRRQ---KQNNQTTKPTHPDQCISSD------ 218
T MLPDN G+ G YSGAA+WGSSP+ID R N T P C+ ++
Sbjct: 203 TGMLPDNHGQNGLYSGAAIWGSSPSIDEERGLVYIATGNLYTVPASVQACLDANRTGCFP 262
Query: 219 ----IYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNP--DCPPGPNLDADFGEAP 272
+ +++VALD ++G I W LGG D+F F C NP +CP P D DFGE+P
Sbjct: 263 SNATLCDDAVVALDTETGAIRWCNRLGGDDVFSFICRDRANPLPNCPSQPGPDYDFGESP 322
Query: 273 MLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDIIWFKLAGPGGREGGGVWGAATDGRRV 332
ML+TI R+RDVVV QKSG WA DR +G+++W LAGPG + GG +WGAA D R+
Sbjct: 323 MLVTIRHRNRWRDVVVTGQKSGIVWAHDRSTGELVWETLAGPGSKSGGAIWGAAADNTRI 382
Query: 333 YTNIVNND--------------------------RIIWSTADPSNETAHGPVTVVNGVLF 366
YTNIVN D I WSTA+P+ A+G V + N VLF
Sbjct: 383 YTNIVNRDGLNFTLIPSSNVTRGGGWVAMDANTGVIRWSTANPTGALAYGAVAIANDVLF 442
Query: 367 AGSV----------SANGSTVY---------GGVPASYGCIYLGNGYTVSLGKFHPTWTP 407
GS + NGS V+ GG + GC ++G+GY T
Sbjct: 443 VGSFEDAGYIYALDARNGSIVWRGMTNAKQGGGFSVADGCAFVGSGYMPP--------TT 494
Query: 408 GTSLYAFC 415
G S+YAFC
Sbjct: 495 GDSIYAFC 502
>gi|302785728|ref|XP_002974635.1| hypothetical protein SELMODRAFT_442585 [Selaginella moellendorffii]
gi|300157530|gb|EFJ24155.1| hypothetical protein SELMODRAFT_442585 [Selaginella moellendorffii]
Length = 552
Score = 329 bits (843), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 212/493 (43%), Positives = 274/493 (55%), Gaps = 88/493 (17%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAGKDISATPAVANGVVYFPSWNGYL 60
W++HGGDL NRR+A E LI+ + +L +WSF AG DISATPA+ + VVYFPSWNG +
Sbjct: 28 WISHGGDLKNRRFAEDEHLISVWSAPHLSEKWSFDAGADISATPAIYDCVVYFPSWNGLV 87
Query: 61 YAVNAFNGALIWEQNLSKLTG---LSGTGIVVNVTV--------AVVVAVSRSNGELVW- 108
+AV +G L+W NL+K+TG LS T V A VVA+ R +G +VW
Sbjct: 88 FAVT-IHGELLWRVNLTKITGVATLSRTTPAVTEEFLLYGLLGPARVVALHRKSGRMVWM 146
Query: 109 STQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQT 168
S +D P ++ITMSG+ Y GAFYVG+SSL+E + A CCTF+GS KLD++ G+ IW+T
Sbjct: 147 SEDLDETPLARITMSGTAYDGAFYVGISSLQELVEA-ACCTFQGSFQKLDLKTGKRIWRT 205
Query: 169 YMLPDNGGKRGGYSGAAVWGSSPAIDVIRRQK---QNNQTTKPTHPDQCI-----SSDIY 220
M+P+N + G VWGSSP+ID R N P+ C+ SSD Y
Sbjct: 206 SMVPENSS----FYGVTVWGSSPSIDPKRGLAFIGTGNLYQIPSDVQDCLNRNANSSDCY 261
Query: 221 A-----NSIVALDIDSGRIAWAKPLGGYDIFYFTC---LVPNNPDCPPGPNLDADFGEAP 272
+++VA+++ G I W LGG D++ C P N PGP D DFGE+P
Sbjct: 262 PRGVCDDAVVAVNMADGEIRWCNRLGGNDVWRLACDTNPPPANCPPEPGP--DYDFGESP 319
Query: 273 MLLTIST---NGRFRDVVVAVQKSGFAWAFDRDSGDIIWFKLAGPGGREGGGVWGAATDG 329
MLLTI + +F+D++V QKSG WA DRD G ++W AGPGG GG +WGAATD
Sbjct: 320 MLLTIPSRFSKNKFQDILVTGQKSGIVWAHDRDDGSLVWETTAGPGGSVGGAIWGAATDN 379
Query: 330 RRVYTNIVNND--------------------------RIIWSTADPSNETAHGPVTVVNG 363
RVYTNI N+D RI WSTA+P A+GPVTV NG
Sbjct: 380 HRVYTNIANSDRATFHLVPSGESTTAGGWVAMDAATGRIEWSTANPHGARAYGPVTVANG 439
Query: 364 VLFAGSVSAN-------------------GSTVYGGVPASYGCIYLGNGYTVSLGKFHPT 404
V+F GS + GSTVYGG +GC ++G GY S P
Sbjct: 440 VVFCGSFDKDGHVLALDAESGRILWERTTGSTVYGGPSVGHGCWFIGTGY--SRAPLAPA 497
Query: 405 W--TPGTSLYAFC 415
TPG+ LYAFC
Sbjct: 498 LGGTPGSELYAFC 510
>gi|302767228|ref|XP_002967034.1| hypothetical protein SELMODRAFT_408373 [Selaginella moellendorffii]
gi|300165025|gb|EFJ31633.1| hypothetical protein SELMODRAFT_408373 [Selaginella moellendorffii]
Length = 503
Score = 328 bits (842), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 198/488 (40%), Positives = 267/488 (54%), Gaps = 83/488 (17%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAGKDISATPAVANGVVYFPSWNGYL 60
W NHGGD+ NRR+ E I+P L +W F G +SATPA+ GVVY P+W+G +
Sbjct: 24 WTNHGGDITNRRFQEKEHKISPQNAHTLAQKWRFVTGPFVSATPAIYKGVVYVPTWSGLV 83
Query: 61 YAVNAFNGALIWEQNLSKLTGLSG---------TGIVVNVTV---AVVVAVSRSNGELVW 108
+AV + G+L+W NL+++TGLSG T +V + + A VVA+ R G+LVW
Sbjct: 84 FAV-SMQGSLVWRVNLTQITGLSGVISRTSPALTKELVIIGLLGPAKVVALKRETGKLVW 142
Query: 109 -STQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQ 167
S +++ P ++ITMSG+ + AFYVG+SS +E + CCTF+GS KL + G IW+
Sbjct: 143 ISQELEETPLAKITMSGTAHKDAFYVGISSDQE-VNDTICCTFQGSFQKLSLTTGSRIWK 201
Query: 168 TYMLPDNGGKRGGYSGAAVWGSSPAIDVIRRQ---KQNNQTTKPTHPDQCISSD------ 218
T MLPDN G+ YSGAA+WGSSP+ID R N T P C+ ++
Sbjct: 202 TGMLPDNHGQNELYSGAAIWGSSPSIDEKRGLVYIATGNLYTVPASIQACLDANRTGCFP 261
Query: 219 ----IYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNP--DCPPGPNLDADFGEAP 272
+ +++VALD ++G I W LGG D+F F C NP CP P D DFGE+P
Sbjct: 262 SNATLCDDAVVALDTETGAIRWCNRLGGGDVFSFICRDRENPLPKCPSQPGPDYDFGESP 321
Query: 273 MLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDIIWFKLAGPGGREGGGVWGAATDGRRV 332
ML+TI R+RDVVV QKSG WA DR +G+++W LAGPG + GG +WGAA D R+
Sbjct: 322 MLVTIRHRNRWRDVVVTGQKSGIVWAHDRSTGELVWETLAGPGSKSGGAIWGAAADNTRI 381
Query: 333 YTNIVNND--------------------------RIIWSTADPSNETAHGPVTVVNGVLF 366
YTNIVN D I+WSTA+P+ A+G V + N VLF
Sbjct: 382 YTNIVNRDGLNFTLIPSSNVTRGGGWVAMDANTGAILWSTANPTGALAYGAVAISNDVLF 441
Query: 367 AGSV----------SANGSTVY---------GGVPASYGCIYLGNGYTVSLGKFHPTWTP 407
GS + NG V+ GG + GC ++G+GY T
Sbjct: 442 VGSFEDAGYIYALDARNGRIVWRGMTNSKQGGGFSVADGCAFVGSGYMPP--------TT 493
Query: 408 GTSLYAFC 415
G S+YAFC
Sbjct: 494 GDSIYAFC 501
>gi|302760671|ref|XP_002963758.1| hypothetical protein SELMODRAFT_405158 [Selaginella moellendorffii]
gi|300169026|gb|EFJ35629.1| hypothetical protein SELMODRAFT_405158 [Selaginella moellendorffii]
Length = 493
Score = 311 bits (798), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 194/478 (40%), Positives = 260/478 (54%), Gaps = 76/478 (15%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAGKDISATPAVANGVVYFPSWNGYL 60
W++HGGDL NRR+A E LI+ + +L +WSF AG DISATPA+ + VVYFPSWNG +
Sbjct: 28 WISHGGDLKNRRFAEDEHLISVWSAPHLSEKWSFDAGADISATPAIYDCVVYFPSWNGLV 87
Query: 61 YAVNAFNGALIWEQNLSKLTGLSGTGIVVNVTV-----------AVVVAVSRSNGELVW- 108
+AV +G L+W NL+++TG++ + A VA+ R NG +VW
Sbjct: 88 FAVT-IHGELLWSTNLTEITGVATLSRTIPAVTEELLLYGLLGPARGVALHRKNGRMVWM 146
Query: 109 STQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQT 168
S +D P ++ITMSG+ Y GAFYVG+SSL+E + A CCTF+GS KLD++ G+ IW+T
Sbjct: 147 SEDLDETPLARITMSGTAYDGAFYVGMSSLQELVKA-ACCTFQGSFQKLDLKTGKRIWRT 205
Query: 169 YMLPDNGGKRGGYSGAAVWGSSPAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALD 228
YM P+N G +G S D + R ++ C + +++VA++
Sbjct: 206 YMAPENSGLAFIGTGNLYQIPSDVQDCLNRNANSSD---------CYPRGVCDDAVVAVN 256
Query: 229 IDSGRIAWAKPLGGYDIFYFTC---LVPNNPDCPPGPNLDADFGEAPMLLTIST---NGR 282
+ G I W LGG D++ C P N PGP D D GE+PMLLTI + +
Sbjct: 257 MPDGEIRWCNRLGGNDVWRLACDTNPPPANCPPEPGP--DYDLGESPMLLTIPSRFSKNK 314
Query: 283 FRDVVVAVQKSGFAWAFDRDSGDIIWFKLAGPGGREGGGVWGAATDGRRVYTNIVNN--- 339
F+D+VV QKSG WA DRD G + W AGPGG GG +WGAATD RVYTNI N+
Sbjct: 315 FQDIVVTGQKSGIVWAHDRDDGSLAWETTAGPGGFVGGAIWGAATDNHRVYTNIANSGSA 374
Query: 340 -----------------------DRIIWSTADPSNETAHGPVTVVNGVLFAGSVSAN--- 373
RI WSTA+P + A+GPVTV NGV+F GS +
Sbjct: 375 TFQLVPSGGSTTAGGWVAMDAATGRIEWSTANPHSARAYGPVTVANGVVFCGSFDKDGHV 434
Query: 374 ----------------GSTVYGGVPASYGCIYLGNGYTVSLGKFHPTWTPGTSLYAFC 415
GSTVYGG+ +GC ++G GY+ TPG+ LYAFC
Sbjct: 435 LALDAESGPILWERTTGSTVYGGLSVGHGCCFVGTGYSWDPLGDALGGTPGSELYAFC 492
>gi|302786140|ref|XP_002974841.1| hypothetical protein SELMODRAFT_442588 [Selaginella moellendorffii]
gi|300157736|gb|EFJ24361.1| hypothetical protein SELMODRAFT_442588 [Selaginella moellendorffii]
Length = 606
Score = 299 bits (765), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 201/486 (41%), Positives = 259/486 (53%), Gaps = 102/486 (20%)
Query: 2 LNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAGKDISATPAVANGVVYFPSWNGYLY 61
++HGGDL NRR+A E I+ +L RWSF AG DISATPA+ + VVYFPSWNG+++
Sbjct: 147 ISHGGDLKNRRFAEDEHFISVWRAPHLSERWSFDAGADISATPAIYDCVVYFPSWNGFVF 206
Query: 62 AVNAFNGALIWEQNLSKLT---GLSGTGIVVNVTV--------AVVVAVSRSNGELVW-S 109
AV + G L+W NL ++T LS T V + A VVA+ R +G LVW S
Sbjct: 207 AV-SIQGQLLWRVNLPEITRVATLSRTTPAVTEDLLLYGLLGPARVVALDRKSGRLVWMS 265
Query: 110 TQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTY 169
+D R++ITMSG+ Y GAFYVG+SS +E + A CCTF+GS KLD++NG+ W+T
Sbjct: 266 EDLDETARARITMSGTAYDGAFYVGISSRQELVEA-TCCTFQGSFQKLDLKNGKRRWRTD 324
Query: 170 MLPDNGGKRGGYSGAAVWGSSPAIDVIRRQ---KQNNQTTKPTHPDQCI-----SSDIYA 221
M+P+N G + G +VWGSSP++D R N P+ C+ SSD Y
Sbjct: 325 MVPENSG----FYGVSVWGSSPSVDPKRGLVFIGTGNLYQIPSDVQDCLNRNANSSDCY- 379
Query: 222 NSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCP-PGPNLDADFGEAPMLLTIST- 279
P G D T + N D P PGP D DFGE+PMLLTI +
Sbjct: 380 -----------------PRGVCDD---TVVAVNMADAPEPGP--DYDFGESPMLLTIPSR 417
Query: 280 --NGRFRDVVVAVQKSGFAWAFDRDSGDIIWFKLAGPGGREGGGVWGAATDGRRVYTNIV 337
+F+D+VV QKSG WA DRD G ++W AGPGG GG +WGAATD RVYTNI
Sbjct: 418 YSKNKFQDIVVTGQKSGIVWAHDRDDGSLVWETTAGPGGSVGGAIWGAATDNHRVYTNIA 477
Query: 338 NND--------------------------RIIWSTADPSNETAHGPVTVVNGVLFAGSVS 371
N+D RI WSTA+ A+GPVTV NGV+F GS
Sbjct: 478 NSDRATFQLVPSGESTTAGGWVAMEAATGRIEWSTANAHGSRAYGPVTVANGVVFCGSFD 537
Query: 372 AN-------------------GSTVYGGVPASYGCIYLGNGYTVSLGKFHPTW--TPGTS 410
+ GSTVYGG+ +GC ++G GY S P + TPG+
Sbjct: 538 NDGHVLELDAESGRILWERTTGSTVYGGLSVGHGCCFIGTGY--SRAPLAPAFGGTPGSK 595
Query: 411 LYAFCT 416
+ F T
Sbjct: 596 YHTFDT 601
>gi|449520922|ref|XP_004167481.1| PREDICTED: polyvinylalcohol dehydrogenase-like [Cucumis sativus]
Length = 362
Score = 295 bits (754), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 171/357 (47%), Positives = 219/357 (61%), Gaps = 72/357 (20%)
Query: 130 AFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYSGAAVWGS 189
+F++G SSLEE LP DQCCTFRGS +KLD + G I+WQT+MLPDN G YSGAA+WGS
Sbjct: 6 SFFIGTSSLEEGLPVDQCCTFRGSFSKLDAKTGAILWQTFMLPDNHGDTEQYSGAAIWGS 65
Query: 190 SPAIDVIR--------------------RQKQNNQTTKPTHPDQCISSDIYANSIVALDI 229
SP+ID +R +++QNNQT +PT PD+CI + ++NSI+ALD+
Sbjct: 66 SPSIDPLRNLVYIATGNLYSAPLRIRECQERQNNQT-EPTLPDKCIEPENHSNSILALDL 124
Query: 230 DSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVA 289
DSG I W K LGGYD+++ C +P CPPGP+ D+DFGE+PM+L++ RD+VVA
Sbjct: 125 DSGDIKWYKQLGGYDVWFGACNWHLDPRCPPGPSSDSDFGESPMMLSVFVRNMKRDIVVA 184
Query: 290 VQKSGFAWAFDRDSGDIIWFKLA------GPGGREGGGVWGAATDGRRVYTNIVNNDR-- 341
VQKSGFAWA DRD+G+++W K + GPGG GGG+WGAATD +RVYTNI N+
Sbjct: 185 VQKSGFAWALDRDNGNLVWSKESFIPLEAGPGGLGGGGMWGAATDEKRVYTNIANSQHKN 244
Query: 342 ------------------------IIWSTADPSNETAHGPVTVVNGVLFAGSV------- 370
IIWSTA+ TA GPVT+ NGV+FAGS
Sbjct: 245 FTLKPTNKTTIAGGWVAMEAKTGDIIWSTANLKEATAPGPVTIANGVVFAGSTYRQGPIY 304
Query: 371 ------------SANGSTVYGGVPASYGCIYLGNGYTVSLGKFHPTWTPGTSLYAFC 415
G +VYGG+ S GCIY+GNGY +G + +T GTSLYAFC
Sbjct: 305 AMDAKTGKIVWSYETGGSVYGGISVSKGCIYVGNGYKEHIGFVNKNYTAGTSLYAFC 361
>gi|302804851|ref|XP_002984177.1| hypothetical protein SELMODRAFT_445822 [Selaginella moellendorffii]
gi|300148026|gb|EFJ14687.1| hypothetical protein SELMODRAFT_445822 [Selaginella moellendorffii]
Length = 494
Score = 294 bits (753), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 196/490 (40%), Positives = 267/490 (54%), Gaps = 84/490 (17%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAGKDISATPAVANGVVYFPSWNGYL 60
W++HGGDL NRRYA E IN T +L LRW + D+SATPA+ + VY PSWNG +
Sbjct: 10 WISHGGDLGNRRYAASEHKINLETAPSLALRWRYVTQGDVSATPAIHDCAVYVPSWNGIV 69
Query: 61 YAVNAFNGALIWEQNLSKLTGLS-----GTGIVVNVTVAV-------VVAVSRSNGELVW 108
AV A +GA +W+ NLS++T L T +V V V V+ + R G+L+W
Sbjct: 70 AAV-AMDGATLWQTNLSQVTSLHPAVSRATPVVTKRCVLVGLRGPARVLCLDRMTGDLLW 128
Query: 109 STQ-IDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQ 167
+Q ++ P S ITMSG+ Y GA+YVG+SS+++ A CCTF+GS KLD++ G+ +W
Sbjct: 129 MSQDLELAPHSMITMSGTAYDGAYYVGVSSMQQH--AKSCCTFQGSFHKLDLQTGQTVWS 186
Query: 168 TYMLPDNGGKRGGYSGAAVWGSSPAIDVIR---------------RQKQNNQTTKPTHPD 212
TYM+P + Y+G VWGSSPA+D R +Q Q T +
Sbjct: 187 TYMVP----RDSQYTGVPVWGSSPALDERRGLVYISTGSVFSVPSEVRQCQQATG--NSS 240
Query: 213 QCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCL-VPNNPDCPPGPNLDADFGEA 271
CI + NS+VA+D G I W + +I+ C + P+CPP P+ DADFGE+
Sbjct: 241 SCIVPSVCYNSVVAVDTRDGTIRWCSRMTMSEIWENACRSIRPPPNCPPRPDPDADFGES 300
Query: 272 PMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDIIWFKLAGPGGREGGGVWGAATDGRR 331
PML+TI G RDVVV QK+GF WA DR++G+++W +AGPGG GG WG+ATD R
Sbjct: 301 PMLVTIQQQGALRDVVVTGQKTGFVWAHDRETGELVWHAVAGPGGSGGGANWGSATDNSR 360
Query: 332 VYTNIVNND--------------------------RIIWSTADPSNETAHGPVTVVN-GV 364
V+TNI N+D R++WST +P+ + A+GPVT + GV
Sbjct: 361 VFTNIANSDRQSFLHEPSQLVTTGGGWVAMAATTGRLLWSTPNPTGQPAYGPVTYTHGGV 420
Query: 365 LFAGSVSAN-------------------GSTVYGGVPASYGCIYLGNGYTVSLGKFHPTW 405
L S +N GSTVYGG GC ++G GY +
Sbjct: 421 LLCTSFDSNGHVYAINSYSGEIIWNATTGSTVYGGFSVGCGCAFVGAGYASTPTGLALGG 480
Query: 406 TPGTSLYAFC 415
TPG SL+AFC
Sbjct: 481 TPGDSLFAFC 490
>gi|302760673|ref|XP_002963759.1| hypothetical protein SELMODRAFT_438508 [Selaginella moellendorffii]
gi|300169027|gb|EFJ35630.1| hypothetical protein SELMODRAFT_438508 [Selaginella moellendorffii]
Length = 604
Score = 293 bits (749), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 192/476 (40%), Positives = 252/476 (52%), Gaps = 86/476 (18%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAGKDISATPAVANGVVYFPSWNGYL 60
W++HGGDL NRR+A E LI+ L RW+F AG DISATPA+ + VVYF SWNG +
Sbjct: 146 WISHGGDLKNRRFAEDEHLISVGHAPQLSERWNFDAGADISATPAICDCVVYFHSWNGLV 205
Query: 61 YAVNAFNGALIWEQNLSKLT---GLSGTGIVVNVTV--------AVVVAVSRSNGELVW- 108
+AV + G L+W NL+++T LS T V + A VVA+ R +G LVW
Sbjct: 206 FAV-SIQGQLLWRVNLTEITRVATLSRTTPAVTEDLLLYGLLGSARVVALERKSGRLVWM 264
Query: 109 STQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQT 168
S +D R++ITMSG+ Y GAFYVG+SS +E + A CCTF+GS KLD++NG+ IW+T
Sbjct: 265 SEDLDETARARITMSGTAYDGAFYVGISSRQELVEA-TCCTFQGSFQKLDLKNGKRIWRT 323
Query: 169 YMLPDNGGKRGGYSGAAVWGSSPAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALD 228
YM P+N G G AV S P+ D + T++ S++ + L
Sbjct: 324 YMAPENSGSTALQFGEAVLPSIPSEDSSSLALGTSATSR------TASTETPTRATAILP 377
Query: 229 IDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTIST---NGRFRD 285
+ + + + L NP P P LD DFGE+PMLLTI + +F+D
Sbjct: 378 ASATTLLYGRRLA----------CDTNPPPAPEPGLDYDFGESPMLLTIPSRYSKNKFQD 427
Query: 286 VVVAVQKSGFAWAFDRDSGDIIWFKLAGPGGREGGGVWGAATDGRRVYTNIVNND----- 340
+VV QKSG WA DRD G ++W AGPGG GG +WGAATD RVYTNI N+D
Sbjct: 428 IVVTGQKSGIVWAHDRDDGSLVWETTAGPGGSVGGAIWGAATDNHRVYTNIANSDRATFQ 487
Query: 341 ---------------------RIIWSTADPSNETAHGPVTVVNGVLFAGSVSAN------ 373
RI WSTA+P + A+GPVTV NGV+F GS +
Sbjct: 488 HVPSGESTTAGGWVAMEAATGRIEWSTANPHSARAYGPVTVANGVVFCGSFDKDGHVLAL 547
Query: 374 -------------GSTVYGGVPASYGCIYLGNGYTVSLGKFHPTW--TPGTSLYAF 414
GSTVYGG S G ++G GY S P + TPG+ + F
Sbjct: 548 DAESGRILWERTTGSTVYGG--PSVG--HIGTGY--SRAPLAPAFGGTPGSKYHTF 597
>gi|302780978|ref|XP_002972263.1| hypothetical protein SELMODRAFT_441782 [Selaginella moellendorffii]
gi|300159730|gb|EFJ26349.1| hypothetical protein SELMODRAFT_441782 [Selaginella moellendorffii]
Length = 494
Score = 293 bits (749), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 196/490 (40%), Positives = 266/490 (54%), Gaps = 84/490 (17%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAGKDISATPAVANGVVYFPSWNGYL 60
W++HGGDL NRRYA E IN T +L LRW + D+SATPA+ + VY PSWNG +
Sbjct: 10 WISHGGDLGNRRYAASEHKINLETAPSLALRWRYVTQGDVSATPAIHDCAVYVPSWNGIV 69
Query: 61 YAVNAFNGALIWEQNLSKLTGLS-----GTGIVVNVTVAV-------VVAVSRSNGELVW 108
AV A +GA +W+ NLS++T L T +V V V V+ + R G+L+W
Sbjct: 70 AAV-AMDGATLWQTNLSQVTSLHPAVSRATPVVTKRCVLVGLRGPARVLCLDRMTGDLLW 128
Query: 109 -STQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQ 167
S ++ P S ITMSG+ Y GA+YVG+SS+++ A CCTF+GS KLD++ G+ +W
Sbjct: 129 MSPDLELAPHSMITMSGTAYDGAYYVGVSSMQQH--AKSCCTFQGSFHKLDLQTGQTVWS 186
Query: 168 TYMLPDNGGKRGGYSGAAVWGSSPAIDVIR---------------RQKQNNQTTKPTHPD 212
TYM+P + Y+G VWGSSPA+D R +Q Q T +
Sbjct: 187 TYMVP----RDSQYTGVPVWGSSPALDERRGLVYIATGSVFSVPSEVRQCQQATG--NSS 240
Query: 213 QCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCL-VPNNPDCPPGPNLDADFGEA 271
CI + NS+VA+D G I W + +I+ C + P+CPP P+ DADFGE+
Sbjct: 241 SCIVPSVCYNSVVAVDTRDGTIRWCSRMTMSEIWENACRSIRPPPNCPPRPDPDADFGES 300
Query: 272 PMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDIIWFKLAGPGGREGGGVWGAATDGRR 331
PML+TI G RDVVV QK+GF WA DR++G+++W +AGPGG GG WG+ATD R
Sbjct: 301 PMLVTIQQQGALRDVVVTGQKTGFVWAHDRETGELVWHAVAGPGGSGGGANWGSATDNSR 360
Query: 332 VYTNIVNND--------------------------RIIWSTADPSNETAHGPVTVVN-GV 364
V+TNI N+D R++WST +P+ + A+GPVT + GV
Sbjct: 361 VFTNIANSDRQSFLHEPSQLVTTGGGWVAMAATTGRLLWSTPNPTGQPAYGPVTYTHGGV 420
Query: 365 LFAGSVSAN-------------------GSTVYGGVPASYGCIYLGNGYTVSLGKFHPTW 405
L S +N GSTVYGG GC ++G GY +
Sbjct: 421 LLCTSFDSNGHVYAINSYSGEIIWNATTGSTVYGGFSVGCGCAFVGAGYASTPTGLALGG 480
Query: 406 TPGTSLYAFC 415
TPG SL+AFC
Sbjct: 481 TPGDSLFAFC 490
>gi|317123495|ref|YP_004097607.1| pyrrolo-quinoline quinone repeat-containing protein
[Intrasporangium calvum DSM 43043]
gi|315587583|gb|ADU46880.1| Pyrrolo-quinoline quinone repeat-containing protein
[Intrasporangium calvum DSM 43043]
Length = 520
Score = 256 bits (654), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 165/475 (34%), Positives = 235/475 (49%), Gaps = 86/475 (18%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAGKDISATPAVANGVVYFPSWNGYL 60
W + GGD +N R A E I+P TV +L +W AG D+SATPAV VY P W G L
Sbjct: 35 WNSAGGDRSNTRNAASETKISPSTVGDLTPKWVLTAGGDVSATPAVDGTRVYVPDWAGNL 94
Query: 61 YAVNAFNGALIWEQNLSKLTGLSG-----TGIVVNVTVAV-----------VVAVSRSNG 104
YAV+ G + W+ ++ +TG+ G T + T+ V V+A+ ++ G
Sbjct: 95 YAVDRMTGEVAWQASIPDITGVPGNKARATPAFTDTTLVVGDQGPFGGGGRVIALDKATG 154
Query: 105 ELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEA----LPADQCCTFRGSLAKLDVR 160
W TQ+D P + IT S +++ G YVG++S EEA +P CCTFRGSL LD+
Sbjct: 155 AARWVTQVDSNPGAIITQSATIFDGVVYVGVASQEEAYSALVPGYDCCTFRGSLVALDLA 214
Query: 161 NGRIIWQTYMLPDNGGKRGGYSGAAVWGSSPAIDVIRRQ----KQNN------------- 203
G I+W+TYM P++ + G AVWGSSPA+D R NN
Sbjct: 215 TGSILWKTYMTPED------FPGVAVWGSSPAVDPKRGTVYIATGNNYDVPQDVLDCVAA 268
Query: 204 QTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPN 263
T P C+ + +SIVALD+ +G + WA YD + +C+ N +CP
Sbjct: 269 AGTDPVAQRACLPPEDLFDSIVALDMRTGAVKWATHAISYDAWTVSCIFGNPSNCPSPAG 328
Query: 264 LDADFGEAPMLLTISTN-GRFRDVVVAVQKSGFAWAFDRDSGDIIWFKLAGPGGREGGGV 322
D DFG+AP L +++ + R+++ A QKSG WA D D+G ++W AGPGG GG
Sbjct: 329 PDYDFGQAPALFKVASGPAKGRELLGAGQKSGQYWALDPDTGAVVWETQAGPGGTAGGLQ 388
Query: 323 WGAATDGRRVYTNIVNNDRI-----------IWSTADPSN------------ETAHGPVT 359
WG+A DGRR+YT N++ + +WS DPS + GP T
Sbjct: 389 WGSAVDGRRIYTANANSNLVEFPDGSGDTSGVWSALDPSTGAILWQTRPTHGGSTSGPAT 448
Query: 360 VVNGVLFAGSVSAN-------------------GSTVYGGVPASYGCIYLGNGYT 395
NGV+F ++ A+ G + G S G +Y G+GY+
Sbjct: 449 TANGVVFGCALDADGYMYALDAATGEILWSFESGGSCLSGAAISNGMVYWGSGYS 503
>gi|162453679|ref|YP_001616046.1| polyvinylalcohol dehydrogenase [Sorangium cellulosum So ce56]
gi|161164261|emb|CAN95566.1| putative polyvinylalcohol dehydrogenase [Sorangium cellulosum So
ce56]
Length = 516
Score = 250 bits (639), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 172/494 (34%), Positives = 240/494 (48%), Gaps = 96/494 (19%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAGKDISATPAVANGVVYFPSWNGYL 60
W +G DL N YA E + P V +L ++W+F + ATPAV +G VYFP G L
Sbjct: 36 WTVYGYDLANTHYARDEHHLGPSNVASLAVKWAFTTTGIVPATPAVDHGAVYFPDGGGKL 95
Query: 61 YAVNAFNGALIWEQNLSKLTGLSG------------TGIVVNVTVAVVVAVSRSNGELVW 108
Y ++A G IW + ++ LTG +G T + + A ++AV G L+W
Sbjct: 96 YKLDARTGHPIWTRTIAALTGTAGAVSRTTPALHGHTLFLGTLAGAHMIAVDTRTGALLW 155
Query: 109 STQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQ---CCTFRGSLAKLDVRNGRII 165
Q+D P + IT S V+ G YVG+SS EE AD CC+FRGS+ LD G ++
Sbjct: 156 KRQLDTHPAAIITQSPVVHGGRVYVGVSSREELFAADNAYPCCSFRGSVVALDAGTGAVL 215
Query: 166 WQTYMLPDNGGKRGGYSGAAVWGSSPAIDVIRRQ----KQNNQTTKPT------------ 209
W+ Y +P GY+G AVWG +P++D+ RR NN T P+
Sbjct: 216 WKRYTVP------AGYTGGAVWGGAPSLDLKRRTLYVTTGNNYTVPPSVSACVEAAGDDP 269
Query: 210 -HPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNN--PDCPPGPNLDA 266
+ C++ D Y ++++ALD+ +G + WA+ L G+D + C + PD P GP D
Sbjct: 270 VAAEACLAPDDYIDAVLALDLRTGALKWARRLQGFDAWTGACYFGGDWCPD-PAGP--DY 326
Query: 267 DFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDIIWFKLAGPGGREGGGVWGAA 326
DFG L T RD+V A QKSG WA DRD G ++W L GPGG GG +WG A
Sbjct: 327 DFGTGATLFTAGQGAERRDLVGAGQKSGIFWALDRDDGSVVWSTLVGPGGELGGIMWGVA 386
Query: 327 TDGRRVYTNIVNNDR--------------------------IIWSTADPS-NETAHGPVT 359
D R+Y I NN + I+W T DP+ GP+T
Sbjct: 387 VDESRIYVPIGNNGQVEYTLQPSGEVIDWGSWSALDTATGDILWQTPDPTPGAQTRGPLT 446
Query: 360 VVNGVLFAGSVS------------------ANGSTVYGGVPASYGCIYLGNGY-TVSLGK 400
V NGVL+ GS+S A+GS V G G ++ G+GY + +G
Sbjct: 447 VANGVLYGGSMSGDVHALDAETGDVLWSHPADGS-VNAGPAVVRGTVFWGSGYESFGIG- 504
Query: 401 FHPTWTPGTSLYAF 414
TPG +L+AF
Sbjct: 505 -----TPGNTLFAF 513
>gi|374312659|ref|YP_005059089.1| pyrrolo-quinoline quinone repeat-containing protein [Granulicella
mallensis MP5ACTX8]
gi|358754669|gb|AEU38059.1| Pyrrolo-quinoline quinone repeat-containing protein [Granulicella
mallensis MP5ACTX8]
Length = 538
Score = 249 bits (637), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 173/482 (35%), Positives = 230/482 (47%), Gaps = 96/482 (19%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAGKDISATPAVANGVVYFPSWNGYL 60
W + G L + R E +IN V+ L+++W+F G D+SATP VANGVVY P W G L
Sbjct: 45 WQSAGQSLGDNRQQPAETVINATNVQGLKVKWTFTTGGDVSATPTVANGVVYAPDWKGNL 104
Query: 61 YAVNAFNGALIWEQNLSKLTGLSGT----------------GIVVNVTV----AVVVAVS 100
+A++A G +W +S+ G +G+ V+N T A V+AV
Sbjct: 105 FAIDANTGRQVWSHQVSEYDGQTGSMSRVSPLVLADEVIVGDNVINRTALHNGANVIAVD 164
Query: 101 RSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEAL---PADQCCTFRGSLAKL 157
S+G W TQ+DP P S IT S + Y G YV ++S EEAL P CCTFRGSL L
Sbjct: 165 PSSGIRKWITQVDPHPGSVITGSPTAYNGIVYVPVASNEEALAAVPGYPCCTFRGSLVAL 224
Query: 158 DVRNGRIIWQTYMLPDNGGKRGGYSGAAVWGSSPAIDVIRRQ---KQNNQTTKPTHPDQC 214
D R G I+W+TY +PDNGG GYSG A+W PAIDV R + T P +QC
Sbjct: 225 DARTGSILWKTYTVPDNGGTTDGYSGGAIW-QQPAIDVARGSIYVGTGDNYTVPDAIEQC 283
Query: 215 ISSDI-------------YANSIVALDIDSGRIAWAKPLGGYDIFYFTC---LVPNNPDC 258
+ + + +S++A D+ +G+I WA + YD C L P C
Sbjct: 284 ETEHLSDGDTSSCTPPNDHLDSVMAFDLTTGKIKWANKITNYDTANADCELALAPGATPC 343
Query: 259 PPGPNLDADF-GEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDIIWFKLAGPGGR 317
P P D DF G P LL ++V QKSG WA D D+G + W L GPG
Sbjct: 344 PTPPGRDFDFPGAGPNLL--------GNIVGFGQKSGVYWAVDPDTGAVRWSTLVGPGSF 395
Query: 318 EGGGVWGAATDGRRVYTNIVN--------------------------NDRIIWSTADPSN 351
GG +WG A+DG +Y I N +I+W TADP+
Sbjct: 396 LGGIMWGTASDGNNIYVPIANFTQASYSLSPSGQAITWGSWAALNAQTGQIVWQTADPTK 455
Query: 352 -ETAHGPVTVVNGVLFAGSVS-----------------ANGSTVYGGVPASYGCIYLGNG 393
G +V NGV++AGS S A+G +V G G +Y G+G
Sbjct: 456 GGIDMGAASVANGVVYAGSFSGAMYALNAASGKILWSFASGGSVVGSPSIVNGVVYWGSG 515
Query: 394 YT 395
YT
Sbjct: 516 YT 517
>gi|296082876|emb|CBI22177.3| unnamed protein product [Vitis vinifera]
Length = 251
Score = 230 bits (587), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 115/200 (57%), Positives = 140/200 (70%), Gaps = 22/200 (11%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAGKDISATPAVANGVVYFPSWNGYL 60
WLNHGGDL NRRYA E I+P T LRL+W FYAGKDI+ATPA+ NG +YFPSWNGYL
Sbjct: 13 WLNHGGDLYNRRYASTETKISPETASKLRLKWEFYAGKDITATPAIFNGTLYFPSWNGYL 72
Query: 61 YAVNAFNGALIWEQNLSKLTGLSGTGIVVNV--TV-------------------AVVVAV 99
YAV A +G+L+W+QNL KLTGL+ TG V NV TV AVV+AV
Sbjct: 73 YAVKASDGSLVWKQNLQKLTGLNATGFVNNVNWTVSRATPTIAGDMLIIGIYGPAVVIAV 132
Query: 100 SRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDV 159
++ LVWSTQ+D P +TMS + +MG FYVG SSLEE L +QCC FRGSL+KLD+
Sbjct: 133 KQATERLVWSTQLDSNPAGVVTMSETFHMG-FYVGTSSLEEGLSIEQCCIFRGSLSKLDI 191
Query: 160 RNGRIIWQTYMLPDNGGKRG 179
+ G ++WQT+ LPDN G+RG
Sbjct: 192 KTGALLWQTFTLPDNHGERG 211
>gi|302786138|ref|XP_002974840.1| hypothetical protein SELMODRAFT_442586 [Selaginella moellendorffii]
gi|300157735|gb|EFJ24360.1| hypothetical protein SELMODRAFT_442586 [Selaginella moellendorffii]
Length = 457
Score = 226 bits (576), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 174/494 (35%), Positives = 229/494 (46%), Gaps = 137/494 (27%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAGKDISATPAVANGVVYFPSWNGYL 60
W++HGGDL NRR+A E LI+ +LR +WSF AG DISATPA+ + VVYFPSWNG +
Sbjct: 21 WISHGGDLKNRRFAEDEHLISVWRAPHLREKWSFDAGADISATPAIYDCVVYFPSWNGLV 80
Query: 61 YAVNAFNGALIWEQNLSKLTGLSGTGIVVNVTVAVVVAVSRSNGELVWSTQIDPRPRSQI 120
+AV +GEL+WST + ++I
Sbjct: 81 FAVTI-------------------------------------HGELLWSTNL-----TEI 98
Query: 121 TMSGSVYMGAFYVGLSSLEEALPA--------DQCCTFRGSLAKLDVRNGRIIWQTYMLP 172
T G+++L +PA RG L +NGR++W + L
Sbjct: 99 T------------GVATLSRTIPAVTEELLLYGLLGPARG--VALHRKNGRMVWMSEDLD 144
Query: 173 DNGGKRGGYSGAA-------VWGSSPAIDVIRRQK---QNNQTTKPTHPDQCI-----SS 217
+ R SG VWGSSP+ID R N P+ C+ SS
Sbjct: 145 ETPLARITMSGTTYDGAFYVVWGSSPSIDPKRGLAFIGTGNLYQIPSDVQDCLNRNANSS 204
Query: 218 DIYA-----NSIVALDIDSGRIAWAKPLGGYDIFYFTC---LVPNNPDCPPGPNLDADFG 269
D Y +++VA+++ G I W LGG D++ C P N PGP D D G
Sbjct: 205 DCYPRGVCDDAVVAVNMPDGEIRWCNRLGGNDVWRLACDTNPPPANCPPEPGP--DYDLG 262
Query: 270 EAPMLLTIST---NGRFRDVVVAVQKSGFAWAFDRDSGDIIWFKLAGPGGREGGGVWGAA 326
E+PMLLTI + +F+D++V QKSG WA DRD G + W K AGPGG GG +WGAA
Sbjct: 263 ESPMLLTIPSRFSKNKFQDILVTGQKSGIVWAHDRDDGSLAWEKTAGPGGFVGGAIWGAA 322
Query: 327 TDGRRVYTNIVNND--------------------------RIIWSTADPSNETAHGPVTV 360
TD RVYTNI N+D RI WSTA+P + A+ PVTV
Sbjct: 323 TDNHRVYTNIANSDRATFQLVPSGGSTTAGGWVAMDAATGRIEWSTANPHSARAYEPVTV 382
Query: 361 VNGVLFAGSVSAN-------------------GSTVYGGVPASYGCIYLGNGYTVSLGKF 401
NGV+F GS + GSTVYG + + C ++G GY+
Sbjct: 383 ANGVVFCGSFDKDGHVLALDAESGRILWERTTGSTVYGRLSVGHECWFVGTGYSRDPLGA 442
Query: 402 HPTWTPGTSLYAFC 415
TPG+ LYAFC
Sbjct: 443 ALGGTPGSELYAFC 456
>gi|116624789|ref|YP_826945.1| pyrrolo-quinoline quinone [Candidatus Solibacter usitatus
Ellin6076]
gi|116227951|gb|ABJ86660.1| Pyrrolo-quinoline quinone [Candidatus Solibacter usitatus
Ellin6076]
Length = 513
Score = 224 bits (571), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 153/477 (32%), Positives = 219/477 (45%), Gaps = 94/477 (19%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAGKDISATPAVANGVVYFPSWNGYL 60
W G DL + R E I V NL ++W F D+SATP + VYFP W G L
Sbjct: 27 WTIAGQDLADSRSQPSETKIGVSNVGNLAVKWKFTTESDVSATPTIDGDAVYFPDWAGNL 86
Query: 61 YAVNAFNGALIWEQNLSKLTGLSGTGIVVNVTVAV---------------------VVAV 99
+A+ +G+++W ++ G TG + V+ A+ ++AV
Sbjct: 87 FALKKTDGSILWSHKVADYDGF--TGAISRVSPAIHGNDIIIGDLQSSTQPHNGAWIIAV 144
Query: 100 SRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQ---CCTFRGSLAK 156
R G L W TQ+D + IT + A Y G+SS EE+L + CC+FRGS+
Sbjct: 145 DRQTGLLHWKTQVDSHLAAIITGPPVIAGNAVYAGVSSSEESLATNAAYPCCSFRGSMVA 204
Query: 157 LDVRNGRIIWQTYMLPDNGGKRGGYSGAAVWGSSPAIDVIRRQKQNNQTTKPTHPDQ--- 213
L+ NG I+WQT+ +PDN G+ GYSG A+W PAID+ R PD+
Sbjct: 205 LNANNGEILWQTFTVPDNHGRTDGYSGNAIW-QPPAIDLARGLLYTGTGNNYEVPDEVKA 263
Query: 214 ------------CISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNP-DCPP 260
C SS Y +S +ALD+ +G++ W++ L G D++ C+ P CP
Sbjct: 264 CLATATMAEQPSCFSSQDYFDSAMALDLRTGQVRWSRRLQGIDVWTVACVRNPTPVSCPI 323
Query: 261 GPNLDADF-GEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDIIWFKLAGPGGREG 319
+ D D G P LL ++V QKSG WA + D+G ++W + GPG G
Sbjct: 324 PASPDFDLSGSGPNLLP--------NIVGFGQKSGIYWALNPDTGAMVWSTVVGPGATLG 375
Query: 320 GGVWGAATDGRRVYTNIVNN-------------------------DRIIWSTADPSNETA 354
G WG ATDG+R+Y I N+ +I+W TADP
Sbjct: 376 GIEWGTATDGKRIYVAITNSAHLPYPLLDGRSITWGAWSALDVATGKILWQTADPFEAID 435
Query: 355 HGPVTVVNGVLFAGSVSAN-----------------GSTVYGGVPASYGCIYLGNGY 394
G V+V NGV++A S+S N G +V G + G +Y G+GY
Sbjct: 436 MGAVSVANGVVYAPSMSGNMHALDAATGKVLFTFASGGSVLDGPAIADGVVYWGSGY 492
>gi|390958967|ref|YP_006422724.1| PQQ enzyme repeat-containing protein [Terriglobus roseus DSM 18391]
gi|390413885|gb|AFL89389.1| PQQ enzyme repeat-containing protein [Terriglobus roseus DSM 18391]
Length = 514
Score = 215 bits (547), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 161/481 (33%), Positives = 228/481 (47%), Gaps = 97/481 (20%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAGKDISATPAVANGVVYFPSWNGYL 60
W + G L N R E I+ + V L ++W+F D++ATP V+ GVVYFP G L
Sbjct: 27 WTSVGQGLTNLRSQPAEKSISALNVGRLAVKWAFTTVGDVTATPTVSGGVVYFPDSAGNL 86
Query: 61 YAVNAFNGALIWEQNLSKLTGLSGTGIVVNVTV-------------------AVVVAVSR 101
YAVNA G IW+Q ++ G+ V+ V A V AV++
Sbjct: 87 YAVNATTGIKIWQQTITSYVGMPNAIARVSPAVYMNEIILGDNLSVTEKHAGAHVFAVNQ 146
Query: 102 SNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQ---CCTFRGSLAKLD 158
++G+L+W TQ+D + IT S VY YVG+SS EE L + CCTFRGS+ L+
Sbjct: 147 ADGKLLWITQVDANKAAIITGSPVVYNNVAYVGISSEEEGLTQQKGYACCTFRGSIVALN 206
Query: 159 VRNGRIIWQTYMLPDNGGKRGGYSGAAVWGSSPAIDVIRR---QKQNNQTTKPTH----- 210
G +WQTYM PDN G+ YSGAA+W S PAIDV R N + P+
Sbjct: 207 ATTGAKLWQTYMTPDNNGQPNQYSGAAIW-SPPAIDVGRNLLFTTTGNNYSVPSSVQACQ 265
Query: 211 ---------PDQC-ISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTC-LVPNNPDCP 259
+C ++SD++ ++IVAL++ +G W + YD + C L P P+CP
Sbjct: 266 AAANAAHNTTKRCALASDMF-DAIVALNLTTGEPVWWQRPSVYDTYNLACHLTPPGPNCP 324
Query: 260 PGPNLDADF-GEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDIIWFKLAGPGGRE 318
LD DF G P L F +VV A QKSG FD G IW GPGG+
Sbjct: 325 TIQGLDYDFGGGGPNL--------FNNVVGAGQKSGVFNMFDAAKGKYIWSVPVGPGGQL 376
Query: 319 GGGVWGAATDGRRVYTNIVNN-------------------------DRIIWSTADPSN-E 352
GG +WG A+DG R++ N+ +I+W T +P++
Sbjct: 377 GGILWGTASDGSRIFVASANSAAATWTLASGQSINWGFWSALDMKTGKILWQTPEPTHGA 436
Query: 353 TAHGPVTVVNGVLFAGSVSA-------------------NGSTVYGGVPASYGCIYLGNG 393
+A ++ NGV++ GS+ A +G +V+G G +Y G+G
Sbjct: 437 SAISSMSTANGVVYVGSLDAAGYMYALSSATGQVLWSFPSGGSVFGAPAIVDGTLYWGSG 496
Query: 394 Y 394
Y
Sbjct: 497 Y 497
>gi|296082874|emb|CBI22175.3| unnamed protein product [Vitis vinifera]
Length = 535
Score = 209 bits (533), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 118/249 (47%), Positives = 156/249 (62%), Gaps = 48/249 (19%)
Query: 162 GRIIWQTYMLPDNGGKRGGYSGAAVWGSSPAIDVIRR-------------------QKQN 202
G+++W+ + + + K G +GAA+WGSSP+IDV R Q+Q
Sbjct: 290 GKLVWEDFNIME---KANGIAGAAIWGSSPSIDVRRNLVYVATGNLYSAPLSIRECQEQQ 346
Query: 203 NQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGP 262
N T PT PDQCI D ++NSI+A+D+DS +I W + LGGYD ++ C + P+CPPGP
Sbjct: 347 NNQTVPTQPDQCIEPDNHSNSILAIDLDSDKIKWYRQLGGYDAWFLACNNLSTPNCPPGP 406
Query: 263 NLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDIIWFKLAGPGGREGGGV 322
N DADFGEAPM+L+I NG RD+V+AVQKSGF WA DR++G +IW AGPGG GGG
Sbjct: 407 NPDADFGEAPMMLSIYVNGTMRDIVIAVQKSGFVWALDRNNGSLIWATEAGPGGLSGGGT 466
Query: 323 WGAATDGRRVYTNIVNND--------------------------RIIWSTADPSNETAHG 356
WGAATDG +VYTNIVN+D +I+WSTA+PSN T++G
Sbjct: 467 WGAATDGIKVYTNIVNSDSKNFTLKPSEKNTTAGGWVAMEAGTGKILWSTANPSNATSNG 526
Query: 357 PVTVVNGVL 365
PVT+ NG +
Sbjct: 527 PVTIANGAI 535
>gi|402568136|ref|YP_006617480.1| polyvinylalcohol dehydrogenase [Burkholderia cepacia GG4]
gi|402249333|gb|AFQ49786.1| polyvinylalcohol dehydrogenase [Burkholderia cepacia GG4]
Length = 521
Score = 209 bits (532), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 150/459 (32%), Positives = 223/459 (48%), Gaps = 80/459 (17%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAGKDISATPAVANGVVYFPSWNGYL 60
W+ G ++N R A E +I V L RW+ +++ATP VANG VY P + G L
Sbjct: 41 WVFAGQGVDNTRTAPDEHVIGVDNVSQLAPRWTLDTDGNVAATPTVANGTVYVPDFGGSL 100
Query: 61 YAVNAFNGALIWEQNLSKLTGL-------------------SGTGIVVNVTVAVVVAVSR 101
+AV+A +G + W++ +++ +G+ GT I N T A ++A
Sbjct: 101 WAVDAASGKVKWKKKITEYSGVDNDASRTSPAYWEGMLIFGQGTQIANNPTGAFIMAAKA 160
Query: 102 SNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRN 161
+G VW T++D P + IT S V G YVGLSS EAL T+RG++ LD +
Sbjct: 161 EDGAPVWRTKVDSDPTAIITQSPIVDRGVVYVGLSSRAEAL--KDKPTYRGAVVALDGKT 218
Query: 162 GRIIWQTYMLPDNGGKRGGYSGAAVWGSSPAID----VIRRQKQNNQTTKPTH---PDQC 214
G+++W+TYM+P GY+G +VWG++ A+D ++ NN + P H P Q
Sbjct: 219 GKMLWKTYMVPK------GYTGGSVWGNTAAVDHDTGLLYVTTGNNFSVPPGHCRFPTQK 272
Query: 215 -ISSDIYAN---SIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGE 270
D N S VALD+ +G++ W D+ N D GP D DFG
Sbjct: 273 NCQPDTPTNMIDSFVALDLKTGKVVWHSRTLAADM-------STNYDHDDGP--DYDFGS 323
Query: 271 APMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDIIWFKLAGPGGREGGGVWGAATDGR 330
P L + NG+ + +V A KSG WA D +G +IW GPG GG +WG A DG+
Sbjct: 324 GPNLFKATINGKQKTLVGAGAKSGVYWALDPKTGKVIWHTQVGPGSLLGGMLWGTAADGK 383
Query: 331 RVYTNIVNND-----------------------------RIIWSTADPSNETAHGPVTVV 361
R+Y +I N D +++W TADP + ++
Sbjct: 384 RIYVSIGNLDGKSIDVDNGPNGEKTTKGGIWAAVDAATGKVLWRTADPQGKMDTVAMSAA 443
Query: 362 NGVLFAGSVSANGSTVYGGVPASYGCI---YLGNGYTVS 397
NGV++AGS++ G+++Y + A+ G I Y NG VS
Sbjct: 444 NGVVYAGSLAGTGASMY-ALDAATGAIKWSYENNGAVVS 481
>gi|440795487|gb|ELR16607.1| PQQ enzyme repeat domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 555
Score = 206 bits (523), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 164/471 (34%), Positives = 226/471 (47%), Gaps = 89/471 (18%)
Query: 8 LNNRRYAYGEVLINPVTVRNLRLRWSFYAGKDISATPAV-ANGV-VYFPSWNGYLYAVNA 65
++N A E I V L +W D++A P V A+G VYFP WNG ++ V+A
Sbjct: 36 ISNNHRAVDETCIRQSNVHQLTPKWKLDVPSDVTAVPTVSADGRWVYFPDWNGNVWCVSA 95
Query: 66 FNGALIWEQNLSKLTGLSGTGIVVNVTVAVVVAVSR------------------------ 101
GA+ W L +T + GT + N T ++SR
Sbjct: 96 ATGAVRWSVRLDAITDIVGT--IDNATGISSGSLSRNSPALWEDLVLLGDMASGWFFGLN 153
Query: 102 -SNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEE---ALPADQCCTFRGSLAKL 157
++G+LVW T +DP P + ITMS +V+ VG+SS E A+P CCTFRGS A L
Sbjct: 154 ATDGQLVWRTLLDPHPNAVITMSATVHRDRVLVGVSSTENQFGAVPEFPCCTFRGSFAAL 213
Query: 158 DVRNGRIIWQTYMLPDNGGKRGGYSGAAVWGSSPAID-----VIRRQKQNNQTT------ 206
D R+GR+ WQTYM P N YSGA VWGSSP++D V N + T
Sbjct: 214 DARSGRVEWQTYMTPAN------YSGAPVWGSSPSVDDQLGLVYVGTGNNYRETADIRAC 267
Query: 207 --KPTHPDQC-ISSDIYANSIVALDIDSGRIAWAKPL--GGY--DIFYFTCLVPN----- 254
+ T P QC ++ + +SIVA+ + G +AWA+ G Y D + C PN
Sbjct: 268 REQGTPPGQCLVNPHNHVDSIVAMRLTDGAVAWARSFAPGDYLDDAYNLGC-NPNYFPAN 326
Query: 255 -----NPDCPPGPNLDADFGEAPMLLTIS-TNGR----FRDVVVAVQKSGFAWAFDRDSG 304
N +CP P DADFG+APML+ TN R R +V A QK+G A + +G
Sbjct: 327 YSATPNSNCPAVPGADADFGQAPMLIAYEVTNDRGRRETRRLVTAGQKNGMMVALNPATG 386
Query: 305 DIIWFKLAGPGGREGGGVWGAATDGRRVYTNIVNNDRI---------------IWSTADP 349
+ W + AGP G GG WGAA DG+R+ I N++ +W+ DP
Sbjct: 387 ALAWARKAGPAGLNGGAQWGAAFDGQRIVVAITNSNFAEVQGLVPSGGSTYGGLWTALDP 446
Query: 350 SNETAHGPVTVVNGVLFAGSV-SANGSTVYGGVPASYGCIYLGNGYTVSLG 399
++ + V G SV +A G+T Y V A+ G +G+ T SLG
Sbjct: 447 ADGSIVWQTAVPEGQAANSSVAAARGATAYSAVTAANGVFLVGSS-TKSLG 496
>gi|294626467|ref|ZP_06705067.1| polyvinylalcohol dehydrogenase [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 11122]
gi|292599266|gb|EFF43403.1| polyvinylalcohol dehydrogenase [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 11122]
Length = 576
Score = 205 bits (522), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 150/453 (33%), Positives = 216/453 (47%), Gaps = 87/453 (19%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAGKDISATPAVANGVVYFPSWNGYL 60
W GG N R+A GE IN TV+ L+ W+ DISATP++ G +Y P W G L
Sbjct: 68 WTVAGGGYLNSRFAPGEWKINRTTVKTLKPAWTLTTTGDISATPSIEGGTLYVPDWGGTL 127
Query: 61 YAVNAFNGALIWEQNLSKLTGLSGTG------------IVVNVTVAVVVAVSRSNGELVW 108
Y+V+ G W+ LS T S + I+ ++ V+A+ + G+L+W
Sbjct: 128 YSVDTQTGKPNWQVKLSDYTNKSNSLSRTTPAITPKSIILGDMAGGTVLALDKKTGKLLW 187
Query: 109 STQIDPRPRSQITMSGSVYMGAFYVGLSSLE-EALPADQCCTFRGSLAKLDVRNGRIIWQ 167
++++ P++QIT S VY Y+G+SS + E+L +FRGS+ LDV G+ +WQ
Sbjct: 188 KSEVETNPQAQITSSPVVYGNRVYLGVSSRDYESLDPTHRFSFRGSVVALDVNTGKKVWQ 247
Query: 168 TYMLPDNGGKRGGYSGAAVWGSSPAIDVIRRQ---KQNNQTTKPTHPDQCISS------- 217
Y P+ GY+GA+ WG A+D I R+ N P C+S+
Sbjct: 248 FYNAPE------GYTGASTWGQV-AVDPIARRIYFGTGNNYNIPASVGNCVSNARSYRGG 300
Query: 218 -------------DIYANSIVALDIDSGRIAWAKPLGGYDIFYFTC-LVPNNPDCP--PG 261
D Y +S+++L++D+G++ WA GYD + +C L P N CP
Sbjct: 301 ELTVQDELNCMAPDNYVDSVISLNLDTGKLVWANRNQGYDAWNLSCILAPTNGLCPNTQA 360
Query: 262 PNL---DADFGEAPM-LLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDIIWFKLAGPGGR 317
NL D DFG A + L + NG+ + +V A QKSG WAFD +G +W GPGG
Sbjct: 361 TNLTGPDYDFGGAGVQLFAVPRNGKLQQLVGAGQKSGIYWAFDAKTGAKVWSTQVGPGGT 420
Query: 318 EGGGVWGAATD--GRRVYTNIVNN---------------------------DRIIWSTA- 347
GG WGAA D R+Y I NN +I+W
Sbjct: 421 TGGIEWGAAFDPYKSRIYVGINNNLNTPYTLGPDNTVSHNAGSWAALDAGTGKILWQVKA 480
Query: 348 ---DPSNET----AHGPVTVVNGVLFAGSVSAN 373
+P N T A GP+TV +LFAGS++ N
Sbjct: 481 PGINPVNPTVPAGAQGPITVSPNLLFAGSMAGN 513
>gi|380511701|ref|ZP_09855108.1| polyvinylalcohol dehydrogenase [Xanthomonas sacchari NCPPB 4393]
Length = 557
Score = 205 bits (521), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 134/388 (34%), Positives = 201/388 (51%), Gaps = 43/388 (11%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAGKDISATPAVANGVVYFPSWNGYL 60
W + GG N R+A GE I P L+ W+F D+SATP V +Y P W G L
Sbjct: 64 WDSAGGGFLNTRFAPGEWQITPFNAARLKTAWTFTTQGDVSATPTVQGTALYVPDWGGQL 123
Query: 61 YAVNAFNGALIWEQNLSKLTGLSG------------TGIVVNVTVAVVVAVSRSNGELVW 108
Y ++ G +W+ L+ TG++G + +V + V+A+ ++ G+L+W
Sbjct: 124 YRIDTDLGKAVWQVKLADYTGIAGSLSRNSPAIARDSVLVGDQASGTVLAIDKTTGKLLW 183
Query: 109 STQIDPRPRSQITMSGSVYMGAFYVGLSSLE-EALPADQCCTFRGSLAKLDVRNGRIIWQ 167
T ++ P+++IT S +Y YVG+SS + L A TFRGS+A LD++ G+++W
Sbjct: 184 KTLVESNPQARITASPVIYGDRVYVGVSSGDWGGLSAGYKYTFRGSVAALDLKTGKLLWS 243
Query: 168 TYMLPDNGGKRGGYSGAAVWGSSPAIDVIRRQ---KQNNQTTKPTHPDQCISS------- 217
P+ GY+GA+VWG+ AID +R++ N + PT C+ +
Sbjct: 244 FRTAPE------GYTGASVWGTL-AIDPLRQRVYATTGNNYSVPTEVASCVKNANGDKTA 296
Query: 218 -------DIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLV-PNNPDC--PPGPNLDAD 267
D Y +S++ALD+ SG+ W + L G D + +CLV P N C P GP+ D
Sbjct: 297 QLACMAPDNYVDSVLALDMRSGKPVWTRRLQGADAWSLSCLVAPTNGLCQDPQGPDYDFS 356
Query: 268 FGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDIIWFKLAGPGGREGGGVWGAAT 327
G A + I NG+ + +V A QKSG WAFD D+G +W GPGG GG WG++
Sbjct: 357 GGGANLFTAIR-NGKPQALVGAGQKSGVYWAFDADTGQTVWSTQVGPGGTAGGIEWGSSV 415
Query: 328 D--GRRVYTNIVNNDRIIWSTADPSNET 353
D RVY I NN+ ++ A + ET
Sbjct: 416 DPFSGRVYVAINNNEHTPYTLAPGNTET 443
>gi|294666995|ref|ZP_06732223.1| polyvinylalcohol dehydrogenase [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
gi|292603212|gb|EFF46635.1| polyvinylalcohol dehydrogenase [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
Length = 576
Score = 204 bits (518), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 149/453 (32%), Positives = 215/453 (47%), Gaps = 87/453 (19%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAGKDISATPAVANGVVYFPSWNGYL 60
W GG N R+A GE IN TV+ L+ W+ DISATP++ G +Y P W G L
Sbjct: 68 WTVAGGGYLNSRFAPGEWKINRTTVKTLKPAWTLTTTGDISATPSIEGGTLYVPDWGGTL 127
Query: 61 YAVNAFNGALIWEQNLSKLTGLSGTG------------IVVNVTVAVVVAVSRSNGELVW 108
Y+V+ G W+ LS T S + I+ ++ V+A+ + G+L+W
Sbjct: 128 YSVDTQTGKPNWQAKLSDYTNKSNSLSRTTPAITPKSIILGDMAGGTVLALDKKTGKLLW 187
Query: 109 STQIDPRPRSQITMSGSVYMGAFYVGLSSLE-EALPADQCCTFRGSLAKLDVRNGRIIWQ 167
++++ P++QIT S VY Y+G+SS + E+L +FRGS+ LDV G+ +WQ
Sbjct: 188 KSEVETNPQAQITSSPVVYGNRVYLGVSSRDYESLDPTHRFSFRGSVVALDVNTGKKVWQ 247
Query: 168 TYMLPDNGGKRGGYSGAAVWGSSPAIDVIRRQ---KQNNQTTKPTHPDQCISS------- 217
Y P+ GY+GA+ WG A+D I R+ N P C+S+
Sbjct: 248 FYNAPE------GYTGASTWGQV-AVDPIARRIYFGTGNNYNIPASVGNCVSNARSYRGG 300
Query: 218 -------------DIYANSIVALDIDSGRIAWAKPLGGYDIFYFTC-LVPNNPDCP--PG 261
D Y +S+++L++D+G++ WA GYD + +C L P N CP
Sbjct: 301 DLTVQDELNCMAPDNYVDSVISLNLDTGKLVWANRNQGYDAWNLSCILAPTNGLCPNTQA 360
Query: 262 PNL---DADFGEAPM-LLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDIIWFKLAGPGGR 317
NL D DFG A + L + NG+ + +V A QKSG WAFD +G +W GPGG
Sbjct: 361 TNLTGPDYDFGGAGVQLFAVPRNGKLQQLVGAGQKSGIYWAFDAKTGAKVWSTQVGPGGT 420
Query: 318 EGGGVWGAATD--GRRVYTNIVNN---------------------------DRIIWSTA- 347
GG W AA D R+Y I NN +I+W
Sbjct: 421 TGGIEWSAAFDPYKSRIYVGINNNLNTPYTLGPDNTVSHNAGSWAALDAGTGKILWQVKA 480
Query: 348 ---DPSNET----AHGPVTVVNGVLFAGSVSAN 373
+P N T A GP+TV +LFAGS++ N
Sbjct: 481 PGINPVNPTVPAGAQGPITVSPNLLFAGSMAGN 513
>gi|433678924|ref|ZP_20510725.1| polyvinyl-alcohol dehydrogenase (acceptor) [Xanthomonas translucens
pv. translucens DSM 18974]
gi|430815957|emb|CCP41255.1| polyvinyl-alcohol dehydrogenase (acceptor) [Xanthomonas translucens
pv. translucens DSM 18974]
Length = 577
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 135/389 (34%), Positives = 193/389 (49%), Gaps = 45/389 (11%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAGKDISATPAVANGVVYFPSWNGYL 60
W N GG N R+A E INP L+ W+F D+SATP V +Y P W G L
Sbjct: 82 WENAGGGYRNTRFAPAEWQINPFNAARLKPAWTFTTAGDVSATPTVQGSALYVPDWGGQL 141
Query: 61 YAVNAFNGALIWEQNLSKLTGLSG------------TGIVVNVTVAVVVAVSRSNGELVW 108
Y ++ G +W+ LS TG + + +V + VVA+ ++ G+L+W
Sbjct: 142 YRIDTTLGKAVWQVKLSDYTGNAASLSRNSPAIARDSVLVGDQASGTVVAIDKNTGKLLW 201
Query: 109 STQIDPRPRSQITMSGSVYMGAFYVGLSSLE-EALPADQCCTFRGSLAKLDVRNGRIIWQ 167
T ++ +++IT S VY YVG+SS + L +FRGS+A LD++ G+++W
Sbjct: 202 KTLVEANAQARITASPVVYGDRVYVGVSSGDWGGLSPGYTFSFRGSVAALDLKTGKLLWS 261
Query: 168 TYMLPDNGGKRGGYSGAAVWGS------------------SPAIDVIRRQKQNNQTTKPT 209
P+ GY+GAAVWG+ S +DV R K N T
Sbjct: 262 FRTAPE------GYTGAAVWGTLALDPQRQRVYATTGNNYSVPLDVARCVK--NANGDKT 313
Query: 210 HPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLV-PNNPDC--PPGPNLDA 266
C++ D Y +S++ALD+ SG+ W + L G D + +CLV P C P GP+ D
Sbjct: 314 AQLACLAPDNYVDSVLALDMRSGKPVWTRRLQGADAWSLSCLVAPTTGVCQQPQGPDYDF 373
Query: 267 DFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDIIWFKLAGPGGREGGGVWGAA 326
G A + I NG+ + +V A QKSG WAFD DSG +W GPGG GG WG++
Sbjct: 374 SGGGANLFTAIR-NGKPQALVGAGQKSGVYWAFDADSGRTVWSTQVGPGGTAGGIEWGSS 432
Query: 327 TD--GRRVYTNIVNNDRIIWSTADPSNET 353
D RVY I NN+ ++ A + ET
Sbjct: 433 VDPLKSRVYVAINNNNHTSYTLAPGNTET 461
>gi|440732900|ref|ZP_20912692.1| polyvinylalcohol dehydrogenase [Xanthomonas translucens DAR61454]
gi|440365798|gb|ELQ02887.1| polyvinylalcohol dehydrogenase [Xanthomonas translucens DAR61454]
Length = 556
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 135/389 (34%), Positives = 193/389 (49%), Gaps = 45/389 (11%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAGKDISATPAVANGVVYFPSWNGYL 60
W N GG N R+A E INP L+ W+F D+SATP V +Y P W G L
Sbjct: 61 WENAGGGYRNTRFAPAEWQINPFNAARLKPAWTFTTAGDVSATPTVQGSALYVPDWGGQL 120
Query: 61 YAVNAFNGALIWEQNLSKLTGLSG------------TGIVVNVTVAVVVAVSRSNGELVW 108
Y ++ G +W+ LS TG + + +V + VVA+ ++ G+L+W
Sbjct: 121 YRIDTTLGKAVWQVKLSDYTGNAASLSRNSPAIARDSVLVGDQASGTVVAIDKNTGKLLW 180
Query: 109 STQIDPRPRSQITMSGSVYMGAFYVGLSSLE-EALPADQCCTFRGSLAKLDVRNGRIIWQ 167
T ++ +++IT S VY YVG+SS + L +FRGS+A LD++ G+++W
Sbjct: 181 KTLVEANAQARITASPVVYGDRVYVGVSSGDWGGLSPGYTFSFRGSVAALDLKTGKLLWS 240
Query: 168 TYMLPDNGGKRGGYSGAAVWGS------------------SPAIDVIRRQKQNNQTTKPT 209
P+ GY+GAAVWG+ S +DV R K N T
Sbjct: 241 FRTAPE------GYTGAAVWGTLALDPQRQRVYATTGNNYSVPLDVARCVK--NANGDKT 292
Query: 210 HPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLV-PNNPDC--PPGPNLDA 266
C++ D Y +S++ALD+ SG+ W + L G D + +CLV P C P GP+ D
Sbjct: 293 AQLACLAPDNYVDSVLALDMRSGKPVWTRRLQGADAWSLSCLVAPTTGVCQQPQGPDYDF 352
Query: 267 DFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDIIWFKLAGPGGREGGGVWGAA 326
G A + I NG+ + +V A QKSG WAFD DSG +W GPGG GG WG++
Sbjct: 353 SGGGANLFTAIR-NGKPQALVGAGQKSGVYWAFDADSGRTVWSTQVGPGGTAGGIEWGSS 411
Query: 327 TD--GRRVYTNIVNNDRIIWSTADPSNET 353
D RVY I NN+ ++ A + ET
Sbjct: 412 VDPLKSRVYVAINNNNHTSYTLAPGNTET 440
>gi|159467106|ref|XP_001691739.1| predicted protein [Chlamydomonas reinhardtii]
gi|158279085|gb|EDP04847.1| predicted protein [Chlamydomonas reinhardtii]
Length = 1141
Score = 198 bits (504), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 131/386 (33%), Positives = 195/386 (50%), Gaps = 61/386 (15%)
Query: 1 WLNHGGDLNNRRYAY--GEVLINPVTVRNLRLRWSFYAGKDISATPAVANGVVYFPSWNG 58
W + GG+ N R A G+ P + + G D+SATP V N VYF W+G
Sbjct: 41 WGSFGGNNRNWRTATIPGKFRTTPQIAFQVDTQ-----GSDVSATPTVINNFVYFGDWSG 95
Query: 59 YLYAVNAFNGALIWEQNLSKLT---GLSGTGIVVNVTVAV-------------------- 95
+LY V+A GA+ W++N+++L G+ T ++V T A
Sbjct: 96 FLYKVDAQTGAVSWKKNVTELVWPGGVGATNLLVTRTAATDAGNGNIIIGTQTLILPGNF 155
Query: 96 ------VVAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPA--DQC 147
VV++ + W + DP P + +T S +VY GA YVG+SSLEE + A C
Sbjct: 156 AGTQGYVVSIRAKDASTNWKSLPDPHPFAIVTASPTVYKGAIYVGISSLEELVDAFGAPC 215
Query: 148 CTFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYSGAAVWGSSPAIDVIRRQ---KQNNQ 204
CTFRGS+ +LD+ G WQ + P+NGG G +SG AVWGS+PAID R + NQ
Sbjct: 216 CTFRGSVVRLDLLTGATQWQFFTAPENGGVPG-WSGNAVWGSAPAIDEARGRVYVATGNQ 274
Query: 205 TTKPTHPDQCISS-------------DI---YANSIVALDIDSGRIAWAKPLGGYDIFYF 248
P +C+ D+ + NS+++LDI++G + W + +D++
Sbjct: 275 YVAPEEVLECLEDPANDTPAKKGACVDVPGNWFNSVLSLDIETGELVWGNRVSFFDVWTA 334
Query: 249 TCL--VPNNPDCPPGPNLDADFGEAPMLL-TISTNGRFRDVVVAVQKSGFAWAFDRDSGD 305
CL +P DCP + D DFG+AP+ ++ + +D++V QKSG+ + FD +G
Sbjct: 335 ACLPLLPTVTDCPFAESPDYDFGQAPLYFPSVQCGSQRKDILVVGQKSGWGYGFDAATGA 394
Query: 306 IIWFKLAGPGGREGGGVWGAATDGRR 331
+W +G G GG WG ATDG R
Sbjct: 395 TLWQTNSGVGSASGGMQWGTATDGVR 420
Score = 190 bits (482), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 122/349 (34%), Positives = 177/349 (50%), Gaps = 58/349 (16%)
Query: 37 GKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLT---GLSGTGIVVNVTV 93
G D+SATP V N VYF W G+LY V+A GA+ W++N+++L G+ T +V T
Sbjct: 653 GSDVSATPTVINHFVYFGDWTGFLYKVDAVTGAVSWKKNVTELVWPGGVGATNKLVTRTA 712
Query: 94 AV----------------------------VVAVSRSNGELVWSTQIDPRPRSQITMSGS 125
A V+AV S+G W T +D P + +T S +
Sbjct: 713 ATDAGNGNIIIGTQVQSQGLPGNPNGNQGYVLAVKASDGTAAWKTLVDESPYAVVTASPT 772
Query: 126 VYMGAFYVGLSSLEEALP--ADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYSG 183
VY GA YVG+SS+EE + +CC FRGS+ +L + G ++W+ Y PD G+SG
Sbjct: 773 VYKGAVYVGVSSMEELVDGFGIECCKFRGSVVRLALDTGALLWKFYTAPD----VKGWSG 828
Query: 184 AAVWGSSPAIDVIR---RQKQNNQTTKPTHPDQCISSDI---------------YANSIV 225
AVWGS+PAID R NQ T P C+ S + NSI+
Sbjct: 829 NAVWGSAPAIDEARGWVYVATGNQYTAPQDVLDCLESSASNEAKLACVSKEEGNWFNSIL 888
Query: 226 ALDIDSGRIAWAKPLGGYDIFYFTCL--VPNNPDCPPGPNLDADFGEAPMLLT-ISTNGR 282
A+D+++G +AW + + +D++ C+ VP DCP + D DFG+AP+ +
Sbjct: 889 AIDMNTGALAWGRRVSFFDVWTTACIPFVPGVTDCPFVESPDYDFGQAPLYFPGTKCASQ 948
Query: 283 FRDVVVAVQKSGFAWAFDRDSGDIIWFKLAGPGGREGGGVWGAATDGRR 331
D++VA QKSG+ + D +G I+W G G GG WG+A+DG R
Sbjct: 949 TMDILVAGQKSGWGYGIDAATGTILWKTYTGVGSSSGGMQWGSASDGVR 997
>gi|424791084|ref|ZP_18217567.1| exported putative alcohol dehydrogenase (acceptor) [Xanthomonas
translucens pv. graminis ART-Xtg29]
gi|422797690|gb|EKU25904.1| exported putative alcohol dehydrogenase (acceptor) [Xanthomonas
translucens pv. graminis ART-Xtg29]
Length = 577
Score = 198 bits (503), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 133/388 (34%), Positives = 194/388 (50%), Gaps = 43/388 (11%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAGKDISATPAVANGVVYFPSWNGYL 60
W N GG N R+A E INP L+ W+F D+SATP V +Y P W G L
Sbjct: 82 WENAGGGYRNTRFAPAEWQINPFNAARLKTAWTFTTAGDVSATPTVQGSALYVPDWGGQL 141
Query: 61 YAVNAFNGALIWEQNLSKLTGLSG------------TGIVVNVTVAVVVAVSRSNGELVW 108
Y ++ G +W+ LS TG + + +V + VVA+ ++ G+L+W
Sbjct: 142 YRIDTTLGKAVWQVKLSDYTGNAASLSRNSPAIARDSVLVGDQASGTVVAIDKNTGKLLW 201
Query: 109 STQIDPRPRSQITMSGSVYMGAFYVGLSSLE-EALPADQCCTFRGSLAKLDVRNGRIIWQ 167
T ++ +++IT S VY YVG+SS + L +FRGS+A LD++ G+++W+
Sbjct: 202 KTLVEANAQARITASPVVYGDRVYVGVSSGDWGGLTPGYTFSFRGSVAALDLKTGKLLWR 261
Query: 168 TYMLPDNGGKRGGYSGAAVWGSSPAIDVIRRQKQ-----------------NNQTTKPTH 210
P+ GY+GAAVWG+ A+D R++ N T
Sbjct: 262 FQTAPE------GYTGAAVWGTL-ALDPQRQRVYATTGNNYSVPLDVASCVKNANGDKTA 314
Query: 211 PDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLV-PNNPDC--PPGPNLDAD 267
C++ D Y +S++ALD+ SG+ W + L G D + +CLV P C P GP+ D
Sbjct: 315 QLACLAPDNYVDSVLALDMRSGKPVWTRRLQGADAWSLSCLVAPTVGVCQQPQGPDYDFS 374
Query: 268 FGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDIIWFKLAGPGGREGGGVWGAAT 327
G A + I NG+ + +V A QKSG WAFD DSG +W GPGG GG WG++
Sbjct: 375 GGGANLFTAIR-NGKPQALVGAGQKSGVYWAFDADSGRTVWSTQVGPGGTAGGIEWGSSV 433
Query: 328 D--GRRVYTNIVNNDRIIWSTADPSNET 353
D RVY I NN+ ++ A + ET
Sbjct: 434 DPLKSRVYVAINNNNHTSYTLAPGNTET 461
>gi|159476540|ref|XP_001696369.1| predicted protein [Chlamydomonas reinhardtii]
gi|158282594|gb|EDP08346.1| predicted protein [Chlamydomonas reinhardtii]
Length = 544
Score = 196 bits (498), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 121/347 (34%), Positives = 180/347 (51%), Gaps = 55/347 (15%)
Query: 38 KDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTGLSGTG----------- 86
+D+S TP + G YF W G LY V+A G + W N+++L G G
Sbjct: 22 QDVSCTPTIIGGHAYFGDWAGQLYKVDAVTGQVAWALNVTELVWPGGAGATNAVQTRTSP 81
Query: 87 -------IVVNVTVAV-----------VVAVSRSNGELVWSTQIDPRPRSQITMSGSVYM 128
I++ V VV++ S+G + W D P + IT S +VY
Sbjct: 82 TDDGAGNIIIGTQTIVPPGNPKGVQGYVVSLKASDGSVNWRAVPDSHPFAIITASPTVYK 141
Query: 129 GAFYVGLSSLEEALPAD--QCCTFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYSGAAV 186
GA YVG+SS EE + +CCTFRGS+ KLD++ G WQ + PDNGGK G+SG AV
Sbjct: 142 GAVYVGVSSNEELVDGIGLECCTFRGSVVKLDLKTGAKQWQFHTAPDNGGKVDGWSGNAV 201
Query: 187 WGSSPAIDVIRRQ-----KQNNQTTKPTHPDQCISSDI--------------YANSIVAL 227
WGS+P I + +Q N + P +QC+ + + NS++ +
Sbjct: 202 WGSAPTI--VEKQGLVVVATGNTYSVPADVEQCLDAATTPVEKGKCVQVPGNWFNSVLGI 259
Query: 228 DIDSGRIAWAKPLGGYDIFYFTC--LVPNNPDCPPGPNLDADFGEAPMLLTISTNG-RFR 284
++ +G +AW + +D++ TC L+P DCP + D DFG+AP+ + G +
Sbjct: 260 NMANGSLAWGSRVSYFDVWTTTCIPLIPGVADCPVKDSPDYDFGQAPLYFPNTKCGSETK 319
Query: 285 DVVVAVQKSGFAWAFDRDSGDIIWFKLAGPGGREGGGVWGAATDGRR 331
D++VA QKSG+A+ FD +G ++W K AGPG GG WG+ATDG++
Sbjct: 320 DILVAAQKSGWAYGFDAHTGKMLWSKSAGPGSASGGSQWGSATDGKK 366
>gi|209520058|ref|ZP_03268834.1| Pyrrolo-quinoline quinone [Burkholderia sp. H160]
gi|209499489|gb|EDZ99568.1| Pyrrolo-quinoline quinone [Burkholderia sp. H160]
Length = 524
Score = 195 bits (495), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 143/456 (31%), Positives = 200/456 (43%), Gaps = 86/456 (18%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAGKDISATPAVANGVVYFPSWNGYL 60
W G N R E I P TV +L W+ +++ATPA+ YFP GYL
Sbjct: 27 WPTSGNGWMNSRNQENESAIGPKTVGSLHELWAVSTAGNVTATPALDENYAYFPDSAGYL 86
Query: 61 YAVNAFNGALIWEQNLSKLTGL-----------SGTGIVV--------NVTVAVVVAVSR 101
Y V G ++W++ +S TG+ SG +++ A V AV +
Sbjct: 87 YKVERKTGNVVWQKLVSSYTGIPNDYARATPAISGNALILGDQSGKLSTPQPAHVFAVDK 146
Query: 102 SNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEAL-----PADQCCTFRGSLAK 156
+ G L+WSTQ+D S +T S + G +VG++S EE + P TFRGS+
Sbjct: 147 NTGTLLWSTQVDSTTYSMVTQSAVIAKGMAFVGVTSNEEYVAAFIPPPAWQWTFRGSVVA 206
Query: 157 LDVRNGRIIWQTYMLPDNGGKRGGYSGAAVWGSSPAIDVIRR---QKQNNQTTKPTH--- 210
LDV G I WQTY +P GY G +VWGS+ A+DV R N P
Sbjct: 207 LDVGTGAIKWQTYTMPK------GYYGGSVWGSTGAVDVQRNTVFMASGNNWAVPQAVLD 260
Query: 211 -------PDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTC--------LVPNN 255
P CI + + +S++ALD+ +G + W+ YD + C +P N
Sbjct: 261 CLNSGGAPTACIDPNDHFDSVLALDMTTGALKWSARGLPYDTWNVGCGLNIPGVFTLPPN 320
Query: 256 PDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDIIWFKLAGPG 315
+CP D DF + PML NG +V A QKSG WAFD D+G + W PG
Sbjct: 321 ANCPNPKGPDWDFAQGPMLF--GKNGNAGQLVGAGQKSGMFWAFDADTGALRWSTQVAPG 378
Query: 316 GREGGGVWGAATDGRRVYTNI---------------------------------VNNDRI 342
G GG WG+ATDG+ +Y + VN +
Sbjct: 379 GLTGGLQWGSATDGQSIYVAVSNSGMTGAGTTPGVWQLAQGGGTTTSGGWASLDVNTGAV 438
Query: 343 IWSTADPSNETAHGPVTVVNGVLFAGSVSANGSTVY 378
W+T DP A V+V NGV+F ++ T+Y
Sbjct: 439 KWTTPDPLGSRAEAAVSVANGVVFGCNLDYVNGTMY 474
>gi|84621958|ref|YP_449330.1| polyvinylalcohol dehydrogenase [Xanthomonas oryzae pv. oryzae MAFF
311018]
gi|84365898|dbj|BAE67056.1| polyvinylalcohol dehydrogenase [Xanthomonas oryzae pv. oryzae MAFF
311018]
Length = 584
Score = 192 bits (488), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 141/400 (35%), Positives = 207/400 (51%), Gaps = 53/400 (13%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAGKDISATPAVANGVVYFPSWNGYL 60
W GG N R+A GE IN T + L+ W+ DISATP+V G +Y P W G L
Sbjct: 68 WTTAGGGYLNSRFAPGEWKINRTTAKTLKPAWTLTTTGDISATPSVEGGTLYVPDWGGTL 127
Query: 61 YAVNAFNGALIWEQNLSKLTG-----------LSGTGIVVNVTVA-VVVAVSRSNGELVW 108
Y+V+ G W+ LS TG +S I+V VA ++A+ + G+L+W
Sbjct: 128 YSVDTQTGKPNWQAKLSDYTGNANSVTRNTPAISAKSIIVGDQVAGTLLALDKKTGKLLW 187
Query: 109 STQIDPRPRSQITMSGSVYMGAFYVGLSSLEEA-LPADQCCTFRGSLAKLDVRNGRIIWQ 167
T ++ P+++IT S +Y YVG+SS + L A+ +FRGS+ +D+ G+ +WQ
Sbjct: 188 KTTVEANPQARITSSPVIYGNRIYVGVSSGDWGNLAANHTFSFRGSVVAVDLNTGKKVWQ 247
Query: 168 TYMLPDNGGKRGGYSGAAVWGSSPAIDVIRRQ---------------------KQNNQTT 206
Y +P+ GY+GA+VWG AID I R+ +++ + +
Sbjct: 248 FYNVPE------GYTGASVWGQV-AIDPINRRLYFGTGNNYNIPQDVGNCISNERSYRGS 300
Query: 207 KPTHPDQ--CISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLV-PNNPDCP--PG 261
+ T D+ C++ D Y +S+++L++D+G++ WA GYD + +CLV P N CP
Sbjct: 301 ELTVQDELNCMAPDNYVDSVISLNLDTGKLVWANRAQGYDAWNLSCLVAPTNGLCPNTQA 360
Query: 262 PNL---DADFGEAPM-LLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDIIWFKLAGPGGR 317
NL D DFG A + L + NGR + +V A QKSG WAFD +G +W GPGG
Sbjct: 361 TNLTGPDYDFGGAGVQLFAVPGNGRLQQLVGAGQKSGIYWAFDAKTGAKVWSTQVGPGGT 420
Query: 318 EGGGVWGAATD--GRRVYTNIVNNDRIIWSTADPSNETAH 355
GG WG A D +VY I NN + T P+N H
Sbjct: 421 TGGVEWGTAFDPYKSQVYVAINNNANTTY-TLGPANVQTH 459
>gi|188579071|ref|YP_001916000.1| polyvinylalcohol dehydrogenase [Xanthomonas oryzae pv. oryzae
PXO99A]
gi|188523523|gb|ACD61468.1| polyvinylalcohol dehydrogenase [Xanthomonas oryzae pv. oryzae
PXO99A]
Length = 561
Score = 192 bits (488), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 141/400 (35%), Positives = 207/400 (51%), Gaps = 53/400 (13%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAGKDISATPAVANGVVYFPSWNGYL 60
W GG N R+A GE IN T + L+ W+ DISATP+V G +Y P W G L
Sbjct: 45 WTTAGGGYLNSRFAPGEWKINRTTAKTLKPAWTLTTTGDISATPSVEGGTLYVPDWGGTL 104
Query: 61 YAVNAFNGALIWEQNLSKLTG-----------LSGTGIVVNVTVA-VVVAVSRSNGELVW 108
Y+V+ G W+ LS TG +S I+V VA ++A+ + G+L+W
Sbjct: 105 YSVDTQTGKPNWQAKLSDYTGNANSVTRNTPAISAKSIIVGDQVAGTLLALDKKTGKLLW 164
Query: 109 STQIDPRPRSQITMSGSVYMGAFYVGLSSLEEA-LPADQCCTFRGSLAKLDVRNGRIIWQ 167
T ++ P+++IT S +Y YVG+SS + L A+ +FRGS+ +D+ G+ +WQ
Sbjct: 165 KTTVEANPQARITSSPVIYGNRIYVGVSSGDWGNLAANHTFSFRGSVVAVDLNTGKKVWQ 224
Query: 168 TYMLPDNGGKRGGYSGAAVWGSSPAIDVIRRQ---------------------KQNNQTT 206
Y +P+ GY+GA+VWG AID I R+ +++ + +
Sbjct: 225 FYNVPE------GYTGASVWGQV-AIDPINRRLYFGTGNNYNIPQDVGNCISNERSYRGS 277
Query: 207 KPTHPDQ--CISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLV-PNNPDCP--PG 261
+ T D+ C++ D Y +S+++L++D+G++ WA GYD + +CLV P N CP
Sbjct: 278 EITVQDELNCMAPDNYVDSVISLNLDTGKLVWANRAQGYDAWNLSCLVAPTNGLCPNTQA 337
Query: 262 PNL---DADFGEAPM-LLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDIIWFKLAGPGGR 317
NL D DFG A + L + NGR + +V A QKSG WAFD +G +W GPGG
Sbjct: 338 TNLTGPDYDFGGAGVQLFAVPGNGRLQQLVGAGQKSGIYWAFDAKTGAKVWSTQVGPGGT 397
Query: 318 EGGGVWGAATD--GRRVYTNIVNNDRIIWSTADPSNETAH 355
GG WG A D +VY I NN + T P+N H
Sbjct: 398 TGGVEWGTAFDPYKSQVYVAINNNANTTY-TLGPANVQTH 436
>gi|390991917|ref|ZP_10262168.1| pyrrolo-quinoline quinone coenzyme N-terminus family protein
[Xanthomonas axonopodis pv. punicae str. LMG 859]
gi|418517566|ref|ZP_13083727.1| polyvinylalcohol dehydrogenase [Xanthomonas axonopodis pv.
malvacearum str. GSPB1386]
gi|372553332|emb|CCF69143.1| pyrrolo-quinoline quinone coenzyme N-terminus family protein
[Xanthomonas axonopodis pv. punicae str. LMG 859]
gi|410705678|gb|EKQ64147.1| polyvinylalcohol dehydrogenase [Xanthomonas axonopodis pv.
malvacearum str. GSPB1386]
Length = 576
Score = 191 bits (484), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 139/400 (34%), Positives = 206/400 (51%), Gaps = 53/400 (13%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAGKDISATPAVANGVVYFPSWNGYL 60
W GG N R+A GE IN T + L+ W+ DISATP+V G +Y P W G L
Sbjct: 68 WTTAGGGYLNSRFAPGEWKINRTTAKTLKPAWTLTTTGDISATPSVEGGTLYVPDWGGTL 127
Query: 61 YAVNAFNGALIWEQNLSKLTG-----------LSGTGIVVNVTVA-VVVAVSRSNGELVW 108
Y+V+ G W+ LS TG +S I+V VA ++A+ + G+L+W
Sbjct: 128 YSVDTQTGKPNWQAKLSDYTGNANSVTRNTPAISAKSIIVGDQVAGTLLALDKKTGKLLW 187
Query: 109 STQIDPRPRSQITMSGSVYMGAFYVGLSSLEEA-LPADQCCTFRGSLAKLDVRNGRIIWQ 167
T ++ P+++IT S +Y YVG+SS + L A+ +FRGS+ +D+ G+ +WQ
Sbjct: 188 KTTVEANPQARITSSPVIYGNRIYVGVSSGDWGNLAANHTFSFRGSVVAVDLNTGKKVWQ 247
Query: 168 TYMLPDNGGKRGGYSGAAVWGSSPAIDVIRRQ---------------------KQNNQTT 206
Y +P+ GY+GA+VWG AID I R+ ++ + +
Sbjct: 248 FYNVPE------GYTGASVWGQV-AIDPINRRLYFGTGNNYNIPQGVGNCISNARSYRGS 300
Query: 207 KPTHPDQ--CISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLV-PNNPDCP--PG 261
+ T D+ C++ D Y +S+++L++D+G++ WA GYD + +C+V P N CP
Sbjct: 301 ELTVQDELDCMAPDNYVDSVISLNLDTGKLVWANRAQGYDAWNLSCIVAPTNGLCPNTQA 360
Query: 262 PNL---DADFGEAPM-LLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDIIWFKLAGPGGR 317
NL D DFG A + L + NGR + +V A QKSG WAFD +G +W GPGG
Sbjct: 361 TNLTGPDYDFGGAGVQLFAVPRNGRLQQLVGAGQKSGIYWAFDAKTGAKVWSTQVGPGGT 420
Query: 318 EGGGVWGAATD--GRRVYTNIVNNDRIIWSTADPSNETAH 355
GG WG A D ++Y I NN + T P+N H
Sbjct: 421 TGGVEWGTAFDPYKSQIYVAINNNSNATY-TLGPANVQTH 459
>gi|384417397|ref|YP_005626757.1| polyvinylalcohol dehydrogenase [Xanthomonas oryzae pv. oryzicola
BLS256]
gi|353460311|gb|AEQ94590.1| polyvinylalcohol dehydrogenase [Xanthomonas oryzae pv. oryzicola
BLS256]
Length = 577
Score = 191 bits (484), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 140/400 (35%), Positives = 207/400 (51%), Gaps = 53/400 (13%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAGKDISATPAVANGVVYFPSWNGYL 60
W GG N R+A GE IN + + L+ W+ DISATP+V G +Y P W G L
Sbjct: 69 WTIAGGGYLNSRFAPGEWKINRTSAKTLKPAWTLTTTGDISATPSVEGGTLYVPDWGGML 128
Query: 61 YAVNAFNGALIWEQNLSKLTG-----------LSGTGIVVNVTVA-VVVAVSRSNGELVW 108
Y+V+ G W+ LS TG + I+V VA ++A+ + G+L+W
Sbjct: 129 YSVDTQTGKPNWQAKLSDYTGNANSVTRNTPAIRAKSIIVGDQVAGTLLALDKKTGKLLW 188
Query: 109 STQIDPRPRSQITMSGSVYMGAFYVGLSSLEEA-LPADQCCTFRGSLAKLDVRNGRIIWQ 167
T ++ P+++IT S +Y YVG+SS + L A+ +FRGS+ +D+ G+ +WQ
Sbjct: 189 KTTVEANPQARITSSPLIYGNRIYVGVSSGDWGNLAANHTFSFRGSVVAVDLNTGKKVWQ 248
Query: 168 TYMLPDNGGKRGGYSGAAVWGSSPAIDVIRRQ---------------------KQNNQTT 206
Y +P+ GY+GA+VWG AID I R+ +++ + +
Sbjct: 249 FYNVPE------GYTGASVWGQV-AIDPINRRLYFGTGNNYNIPQGVGNCISNERSYRGS 301
Query: 207 KPTHPDQ--CISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLV-PNNPDCP--PG 261
+ T D+ C++ D Y +S+++L++D+G++ WA GYD + +CLV P N CP
Sbjct: 302 ELTVQDELNCMAPDNYVDSVISLNLDTGKLVWANRAQGYDAWSLSCLVAPTNGLCPNTQA 361
Query: 262 PNL---DADFGEAPM-LLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDIIWFKLAGPGGR 317
NL D DFG A + L T+ NGR + +V A QKSG WAFD +G +W GPGG
Sbjct: 362 TNLTGPDYDFGGAGVQLFTVPRNGRLQQLVGAGQKSGIYWAFDAKTGAKVWSTQVGPGGT 421
Query: 318 EGGGVWGAATD--GRRVYTNIVNNDRIIWSTADPSNETAH 355
GG WG A D +VY I NN + T P+N H
Sbjct: 422 TGGVEWGTAFDPYKSQVYVAINNNANTTY-TLGPANVQTH 460
>gi|418523036|ref|ZP_13089062.1| polyvinylalcohol dehydrogenase [Xanthomonas axonopodis pv.
malvacearum str. GSPB2388]
gi|410700402|gb|EKQ58958.1| polyvinylalcohol dehydrogenase [Xanthomonas axonopodis pv.
malvacearum str. GSPB2388]
Length = 576
Score = 191 bits (484), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 139/400 (34%), Positives = 206/400 (51%), Gaps = 53/400 (13%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAGKDISATPAVANGVVYFPSWNGYL 60
W GG N R+A GE IN T + L+ W+ DISATP+V G +Y P W G L
Sbjct: 68 WTTAGGGYLNSRFAPGEWKINRTTAKTLKPAWTLTTTGDISATPSVEGGTLYVPDWGGTL 127
Query: 61 YAVNAFNGALIWEQNLSKLTG-----------LSGTGIVVNVTVA-VVVAVSRSNGELVW 108
Y+V+ G W+ LS TG +S I+V VA ++A+ + G+L+W
Sbjct: 128 YSVDTQTGKPNWQAKLSDYTGNANSVTRNTPAISAKSIIVGDQVAGALLALDKKTGKLLW 187
Query: 109 STQIDPRPRSQITMSGSVYMGAFYVGLSSLEEA-LPADQCCTFRGSLAKLDVRNGRIIWQ 167
T ++ P+++IT S +Y YVG+SS + L A+ +FRGS+ +D+ G+ +WQ
Sbjct: 188 KTTVEANPQARITSSPVIYGNRIYVGVSSGDWGNLAANHTFSFRGSVVAVDLNTGKKVWQ 247
Query: 168 TYMLPDNGGKRGGYSGAAVWGSSPAIDVIRRQ---------------------KQNNQTT 206
Y +P+ GY+GA+VWG AID I R+ ++ + +
Sbjct: 248 FYNVPE------GYTGASVWGQV-AIDPINRRLYFGTGNNYNIPQGVGNCISNARSYRGS 300
Query: 207 KPTHPDQ--CISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLV-PNNPDCP--PG 261
+ T D+ C++ D Y +S+++L++D+G++ WA GYD + +C+V P N CP
Sbjct: 301 ELTVQDELDCMAPDNYVDSVISLNLDTGKLVWANRAQGYDAWNLSCVVAPTNGLCPNTQA 360
Query: 262 PNL---DADFGEAPM-LLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDIIWFKLAGPGGR 317
NL D DFG A + L + NGR + +V A QKSG WAFD +G +W GPGG
Sbjct: 361 TNLTGPDDDFGGAGVQLFAVPRNGRLQQLVGAGQKSGIYWAFDAKTGAKVWSTQVGPGGT 420
Query: 318 EGGGVWGAATD--GRRVYTNIVNNDRIIWSTADPSNETAH 355
GG WG A D ++Y I NN + T P+N H
Sbjct: 421 TGGVEWGTAFDPYKSQIYVAINNNSNATY-TLGPANVQTH 459
>gi|30794995|ref|NP_851445.1| probable polyvinylalcohol dehydrogenase [Streptomyces rochei]
gi|30698368|dbj|BAC76481.1| probable polyvinylalcohol dehydrogenase [Streptomyces rochei]
Length = 543
Score = 190 bits (483), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 148/480 (30%), Positives = 222/480 (46%), Gaps = 100/480 (20%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAGKDISATPAVANGVVYFPSWNGYL 60
W + G + +N R A E I P V L +W F A DISATP V +G VY P W G L
Sbjct: 60 WASAGQNNHNTRNAATEHTIGPRNVGTLAPKWVFTADGDISATPTVVHGTVYVPDWGGKL 119
Query: 61 YAVNAFNGALIWEQNLSKLTGLSG-------------------TGIVVNVTVAVVVAVSR 101
+AV+A +G +W +++ G+ G T + A +++V
Sbjct: 120 WAVDADSGKAVWSHSIADYDGVEGHMSRTSPAYWQGSLYLGTGTLTTTALKSAYIISVDA 179
Query: 102 SNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRN 161
G W T++D P + +T S +V G YVG+SS L FRGS+ LD
Sbjct: 180 RTGAKQWMTKVDDDPTAVVTSSPTVDDGVVYVGVSSKASTL--HDAPGFRGSVMALDAHT 237
Query: 162 GRIIWQTYMLPDNGGKRGGYSGAAVWGSSPAID----VIRRQKQNNQTTKP---THPDQ- 213
G+I+W+TY +P+ GY+GA+VWGS P +D ++ NN T+ P +P Q
Sbjct: 238 GKILWKTYTIPE------GYTGASVWGSQPVVDHKTGLVFVGTGNNYTSPPGVCLNPKQT 291
Query: 214 -CI--SSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGE 270
C + D + +S++ALD+ +GRI W+ + + T ++ P D DFG
Sbjct: 292 DCTPPAEDDHFDSVLALDLKTGRIRWSH----HTLTADTWMMYQQNQAP-----DFDFGS 342
Query: 271 APMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDIIWFKLAGPGGREGGGVWGAATDGR 330
AP L T +G+ ++++ QKSG + + +G ++W GPGG GG WG+ATDG+
Sbjct: 343 APNLYTTEIDGKPKELLGIGQKSGVYYTLEPATGKVVWQTQVGPGGALGGIQWGSATDGK 402
Query: 331 RVYTNIVNND-----------------------------RIIWSTADPSNETAH----GP 357
R+Y I N D +I W TADP +
Sbjct: 403 RIYVGIGNGDHLPWTITAADGTKSTVDSGFFAAVDAATGKIEWQTADPQGKAGKWLDDSF 462
Query: 358 VTVVNGVLFAGSVS--------------------ANGSTVYGGVPASYGCIYLGNGYTVS 397
+T NGV++AGS + A+G +V+GG G +Y G+GY +S
Sbjct: 463 ITHANGVMYAGSSAPSGTNMYALDADTGKILWDYASGGSVWGGAAVVDGSVYWGSGYYIS 522
>gi|307588627|gb|ADN64238.1| putative polyvinylalcohol dehydrogenase [Streptomyces rochei subsp.
volubilis]
Length = 543
Score = 190 bits (483), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 148/480 (30%), Positives = 222/480 (46%), Gaps = 100/480 (20%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAGKDISATPAVANGVVYFPSWNGYL 60
W + G + +N R A E I P V L +W F A DISATP V +G VY P W G L
Sbjct: 60 WASAGQNNHNTRNAATEHTIGPRNVGTLAPKWVFTADGDISATPTVVHGTVYVPDWGGKL 119
Query: 61 YAVNAFNGALIWEQNLSKLTGLSG-------------------TGIVVNVTVAVVVAVSR 101
+AV+A +G +W +++ G+ G T + A +++V
Sbjct: 120 WAVDADSGKAVWSHSIADYDGVEGHMSRTSPAYWQGSLYLGTGTLTTTALKSAYIISVDA 179
Query: 102 SNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRN 161
G W T++D P + +T S +V G YVG+SS L FRGS+ LD
Sbjct: 180 RTGAKQWMTKVDDDPTAVVTSSPTVDDGVVYVGVSSKASTL--HDAPGFRGSVMALDAHT 237
Query: 162 GRIIWQTYMLPDNGGKRGGYSGAAVWGSSPAID----VIRRQKQNNQTTKP---THPDQ- 213
G+I+W+TY +P+ GY+GA+VWGS P +D ++ NN T+ P +P Q
Sbjct: 238 GKILWKTYTIPE------GYTGASVWGSQPVVDHKTGLVFVGTGNNYTSPPGVCLNPKQT 291
Query: 214 -CI--SSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGE 270
C + D + +S++ALD+ +GRI W+ + + T ++ P D DFG
Sbjct: 292 DCTPPAEDDHFDSVLALDLKTGRIRWSH----HTLTADTWMMYQQNQAP-----DFDFGS 342
Query: 271 APMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDIIWFKLAGPGGREGGGVWGAATDGR 330
AP L T +G+ ++++ QKSG + + +G ++W GPGG GG WG+ATDG+
Sbjct: 343 APNLYTTEIDGKPKELLGIGQKSGVYYTLEPATGKVVWQTQVGPGGALGGIQWGSATDGK 402
Query: 331 RVYTNIVNND-----------------------------RIIWSTADPSNETAH----GP 357
R+Y I N D +I W TADP +
Sbjct: 403 RIYVGIGNGDHLPWTITAADGTKSTVDSGFFAAVDAATGKIEWQTADPQGKAGKWLDDSF 462
Query: 358 VTVVNGVLFAGSVS--------------------ANGSTVYGGVPASYGCIYLGNGYTVS 397
+T NGV++AGS + A+G +V+GG G +Y G+GY +S
Sbjct: 463 ITHANGVMYAGSSAPSGTNMYALDADTGKILWDYASGGSVWGGAAVVDGSVYWGSGYYIS 522
>gi|346726936|ref|YP_004853605.1| polyvinylalcohol dehydrogenase [Xanthomonas axonopodis pv.
citrumelo F1]
gi|346651683|gb|AEO44307.1| polyvinylalcohol dehydrogenase [Xanthomonas axonopodis pv.
citrumelo F1]
Length = 576
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 139/400 (34%), Positives = 206/400 (51%), Gaps = 53/400 (13%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAGKDISATPAVANGVVYFPSWNGYL 60
W GG N R+A GE IN T + L+ W+ DISATP+V G +Y P W G L
Sbjct: 68 WTTAGGGYLNSRFAPGEWKINRTTAKTLKPAWTLTTTGDISATPSVEGGTLYVPDWGGTL 127
Query: 61 YAVNAFNGALIWEQNLSKLTG-----------LSGTGIVVNVTVA-VVVAVSRSNGELVW 108
Y+V+ G W+ LS TG +S I+V VA ++A+ + G+L+W
Sbjct: 128 YSVDTQTGKPNWQAKLSDYTGNANSVTRNTPAISAKSIIVGDQVAGTLLALDKKTGKLLW 187
Query: 109 STQIDPRPRSQITMSGSVYMGAFYVGLSSLEEA-LPADQCCTFRGSLAKLDVRNGRIIWQ 167
T ++ P+++IT S +Y YVG+SS + L A+ +FRGS+ +D+ G+ +WQ
Sbjct: 188 KTTVEANPQARITSSPVIYGNRIYVGVSSGDWGNLAANHTFSFRGSVVAVDLNTGKKVWQ 247
Query: 168 TYMLPDNGGKRGGYSGAAVWGSSPAIDVIRRQ---------------------KQNNQTT 206
Y +P+ GY+GA+VWG AID I R+ ++ + +
Sbjct: 248 FYNVPE------GYTGASVWGQV-AIDPINRRLYFGTGNNYNIPQGVGNCISNARSYRGS 300
Query: 207 KPTHPDQ--CISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLV-PNNPDCP--PG 261
+ T D+ C++ D Y +S+++L++D+G++ WA GYD + +C+V P N CP
Sbjct: 301 ELTVQDELNCMAPDNYVDSVISLNLDTGKLIWANRAQGYDAWNLSCIVAPTNGLCPNTQA 360
Query: 262 PNL---DADFGEAPM-LLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDIIWFKLAGPGGR 317
NL D DFG A + L + NGR + +V A QKSG WAFD +G +W GPGG
Sbjct: 361 TNLTGPDYDFGGAGVQLFAVPRNGRLQQLVGAGQKSGIYWAFDAKTGAKVWSTQVGPGGT 420
Query: 318 EGGGVWGAATD--GRRVYTNIVNNDRIIWSTADPSNETAH 355
GG WG A D ++Y I NN + T P+N H
Sbjct: 421 TGGVEWGTAFDPYKSQIYVAINNNSNATY-TLGPANVQTH 459
>gi|325925450|ref|ZP_08186844.1| glucose dehydrogenase [Xanthomonas perforans 91-118]
gi|325544128|gb|EGD15517.1| glucose dehydrogenase [Xanthomonas perforans 91-118]
Length = 576
Score = 190 bits (482), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 139/400 (34%), Positives = 206/400 (51%), Gaps = 53/400 (13%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAGKDISATPAVANGVVYFPSWNGYL 60
W GG N R+A GE IN T + L+ W+ DISATP+V G +Y P W G L
Sbjct: 68 WTTAGGGYLNSRFAPGEWKINRTTAKTLKPAWTLTTTGDISATPSVEGGTLYVPDWGGTL 127
Query: 61 YAVNAFNGALIWEQNLSKLTG-----------LSGTGIVVNVTVA-VVVAVSRSNGELVW 108
Y+V+ G W+ LS TG +S I+V VA ++A+ + G+L+W
Sbjct: 128 YSVDTQTGKPNWQAKLSDYTGNANSVTRNTPAISAKSIIVGDQVAGTLLALDKKTGKLLW 187
Query: 109 STQIDPRPRSQITMSGSVYMGAFYVGLSSLEEA-LPADQCCTFRGSLAKLDVRNGRIIWQ 167
T ++ P+++IT S +Y YVG+SS + L A+ +FRGS+ +D+ G+ +WQ
Sbjct: 188 KTTVEANPQARITSSPVIYGNRIYVGVSSGDWGNLAANHTFSFRGSVVAVDLNTGKKVWQ 247
Query: 168 TYMLPDNGGKRGGYSGAAVWGSSPAIDVIRRQ---------------------KQNNQTT 206
Y +P+ GY+GA+VWG AID I R+ ++ + +
Sbjct: 248 FYNVPE------GYTGASVWGQV-AIDPINRRLYFGTGNNYNIPQGVGNCISNARSYRGS 300
Query: 207 KPTHPDQ--CISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLV-PNNPDCP--PG 261
+ T D+ C++ D Y +S+++L++D+G++ WA GYD + +C+V P N CP
Sbjct: 301 ELTVQDELNCMAPDNYVDSVISLNLDTGKLIWANRAQGYDAWNLSCIVAPTNGLCPNTQA 360
Query: 262 PNL---DADFGEAPM-LLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDIIWFKLAGPGGR 317
NL D DFG A + L + NGR + +V A QKSG WAFD +G +W GPGG
Sbjct: 361 TNLTGPDYDFGGAGVQLFAVPRNGRLQQLVGAGQKSGIYWAFDAKTGAKVWSTQVGPGGT 420
Query: 318 EGGGVWGAATD--GRRVYTNIVNNDRIIWSTADPSNETAH 355
GG WG A D ++Y I NN + T P+N H
Sbjct: 421 TGGVEWGTAFDPYKSQIYVAINNNSNATY-TLGPANVQTH 459
>gi|440466389|gb|ELQ35660.1| hypothetical protein OOU_Y34scaffold00696g2 [Magnaporthe oryzae
Y34]
gi|440484410|gb|ELQ64482.1| hypothetical protein OOW_P131scaffold00611g4 [Magnaporthe oryzae
P131]
Length = 603
Score = 188 bits (477), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 155/461 (33%), Positives = 207/461 (44%), Gaps = 88/461 (19%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSF-YAGKDISATPAVANGVVYFPSWNGY 59
WL G + N R+A + +++ V NL S YA SA P V GV Y+P+W G
Sbjct: 64 WLGWGAGVYNNRWAGSDAVVDASNVANLTKVCSVQYATAGQSAPPLVTGGVAYYPTWTGL 123
Query: 60 LYAVNAFNGALIWEQNLSKLTGLSGTGIVVN-----------------------VTVAVV 96
L AV+ +W N++++ G V N V A+V
Sbjct: 124 LEAVDYRLCERVWTVNVTRIIDGYRPGPVQNGKAKVSRTTPALGDDGETLFVGTVAHALV 183
Query: 97 VAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEA-LPADQCCTFRGSLA 155
+A+ R G LV S Q+D P + +T S + Y G Y G+SS E A P CC+F GSL
Sbjct: 184 LALDRRTGRLVDSLQLDAHPFAILTQSPTFYDGRLYAGVSSSESAAFPGHPCCSFVGSLH 243
Query: 156 KLDVRNGRI--IWQTYMLPDNGG---KRGGYSGAAVWGSSPAIDVIRRQ----------- 199
+ +R GR+ +W +P + +SGAAVWGS P+ID IRRQ
Sbjct: 244 AVALRRGRLQLLWSAQTIPRHSPADRDDPKFSGAAVWGSQPSIDPIRRQVFVGTGQLYSL 303
Query: 200 -----KQNNQTTKPT--------HPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIF 246
+ QT T H D C+ Y NSI+ALD+D+GR+ WA+ LG D +
Sbjct: 304 PPEFEECQRQTANVTVIRQGLTGH-DPCLPRTAYQNSILALDLDTGRVNWARQLGPLDAW 362
Query: 247 YFTCL----VPNNPD-CPPGPNLDADFGEAPMLLTISTNGRF-RDVVVAVQKSGFAWAFD 300
C+ VP NP CP P DADFG AP + S F D+VVA QK+G W
Sbjct: 363 NAGCIDFPGVPPNPGACPDLPGQDADFGMAPTFVLGSAATPFGVDMVVAGQKNGMLWGLC 422
Query: 301 RDSGDIIWFKLAGPGGREGGGVWGAATDGRRVY-----------------TNIVNND--- 340
+G W GPGG EGG WG A D VY ++V+N
Sbjct: 423 AATGTTAWATQTGPGGLEGGLTWGVAVDDAAVYFVNTNSEHRRFAMPGSGGDVVSNSAFG 482
Query: 341 -------RIIWSTADPSNETAHGPVTVVNGVLFAGSVSANG 374
RI+W T P N ++ VVN V+ G+ A G
Sbjct: 483 AASLADGRILWLTPAPHNHDSYVAPAVVNDVVLVGTSGARG 523
>gi|58579952|ref|YP_198968.1| polyvinylalcohol dehydrogenase [Xanthomonas oryzae pv. oryzae KACC
10331]
gi|58424546|gb|AAW73583.1| polyvinylalcohol dehydrogenase [Xanthomonas oryzae pv. oryzae KACC
10331]
Length = 509
Score = 188 bits (477), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 138/391 (35%), Positives = 204/391 (52%), Gaps = 53/391 (13%)
Query: 10 NRRYAYGEVLINPVTVRNLRLRWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGA 69
N R+A GE IN T + L+ W+ DISATP+V G +Y P W G LY+V+ G
Sbjct: 2 NSRFAPGEWKINRTTAKTLKPAWTLTTTGDISATPSVEGGTLYVPDWGGTLYSVDTQTGK 61
Query: 70 LIWEQNLSKLTG-----------LSGTGIVVNVTVA-VVVAVSRSNGELVWSTQIDPRPR 117
W+ LS TG +S I+V VA ++A+ + G+L+W T ++ P+
Sbjct: 62 PNWQAKLSDYTGNANSVTRNTPAISAKSIIVGDQVAGTLLALDKKTGKLLWKTTVEANPQ 121
Query: 118 SQITMSGSVYMGAFYVGLSSLEEA-LPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNGG 176
++IT S +Y YVG+SS + L A+ +FRGS+ +D+ G+ +WQ Y +P+
Sbjct: 122 ARITSSPVIYGNRIYVGVSSGDWGNLAANHTFSFRGSVVAVDLNTGKKVWQFYNVPE--- 178
Query: 177 KRGGYSGAAVWGSSPAIDVIRRQ---------------------KQNNQTTKPTHPDQ-- 213
GY+GA+VWG AID I R+ +++ + ++ T D+
Sbjct: 179 ---GYTGASVWGQV-AIDPINRRLYFGTGNNYNIPQDVGNCISNERSYRGSELTVQDELN 234
Query: 214 CISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLV-PNNPDCP--PGPNL---DAD 267
C++ D Y +S+++L++D+G++ WA GYD + +CLV P N CP NL D D
Sbjct: 235 CMAPDNYVDSVISLNLDTGKLVWANRAQGYDAWNLSCLVAPTNGLCPNTQATNLTGPDYD 294
Query: 268 FGEAPM-LLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDIIWFKLAGPGGREGGGVWGAA 326
FG A + L + NGR + +V A QKSG WAFD +G +W GPGG GG WG A
Sbjct: 295 FGGAGVQLFAVPGNGRLQQLVGAGQKSGIYWAFDAKTGAKVWSTQVGPGGTTGGVEWGTA 354
Query: 327 TD--GRRVYTNIVNNDRIIWSTADPSNETAH 355
D +VY I NN + T P+N H
Sbjct: 355 FDPYKSQVYVAINNNANTTY-TLGPANVQTH 384
>gi|66770467|ref|YP_245229.1| polyvinylalcohol dehydrogenase [Xanthomonas campestris pv.
campestris str. 8004]
gi|66575799|gb|AAY51209.1| polyvinylalcohol dehydrogenase [Xanthomonas campestris pv.
campestris str. 8004]
Length = 539
Score = 187 bits (476), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 143/400 (35%), Positives = 207/400 (51%), Gaps = 53/400 (13%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAGKDISATPAVANGVVYFPSWNGYL 60
W GG N R+A GE IN T L+ W+ DISATP+V G +Y P W G L
Sbjct: 31 WPTAGGGYFNSRFAPGEWKINRTTAPTLKPAWTLTTTGDISATPSVEGGTLYVPDWGGTL 90
Query: 61 YAVNAFNGALIWEQNLSKLTG-----------LSGTGIVV-NVTVAVVVAVSRSNGELVW 108
Y+V+ +G W+ LS TG +SG I+V + V+A+ + G+L+W
Sbjct: 91 YSVDTQSGKPNWQAKLSDYTGNANSVTRNTPAISGKSIIVGDQASGTVMAIDKKTGKLLW 150
Query: 109 STQIDPRPRSQITMSGSVYMGAFYVGLSSLEEA-LPADQCCTFRGSLAKLDVRNGRIIWQ 167
S+ + P+++IT S +Y YVG+SS + L A TFRGS+ LD+ G+ +WQ
Sbjct: 151 SSVAESNPQARITSSPVIYGNRIYVGISSGDWGNLDATHTFTFRGSVVALDLNTGKKVWQ 210
Query: 168 TYMLPDNGGKRGGYSGAAVWGSSPAIDVIRRQ---------------------KQNNQTT 206
Y +P+ GY+GA+VWG AID I R+ ++ + +
Sbjct: 211 FYNVPE------GYTGASVWGQV-AIDPISRRLYFGTGNNYNIPAGVGNCVSNARSYRGS 263
Query: 207 KPTHPDQ--CISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLV-PNNPDCP--PG 261
+ T D+ C++ D Y +S+VAL++D+G++AWA GYD + +C+V P N CP
Sbjct: 264 ELTVQDELNCMAPDNYVDSVVALNLDTGKLAWADRAQGYDAWNLSCIVAPTNGLCPNTQA 323
Query: 262 PNL---DADFGEAPM-LLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDIIWFKLAGPGGR 317
NL D DFG A + L T+ +G+ + +V A QKSG WAFD +G +W GPGG
Sbjct: 324 TNLTGPDYDFGGAGVQLFTVWRDGKPQQLVGAGQKSGIYWAFDARTGAKVWSTQVGPGGT 383
Query: 318 EGGGVWGAATD--GRRVYTNIVNNDRIIWSTADPSNETAH 355
GG WG A D +VY I N+ + T P N +H
Sbjct: 384 TGGVEWGTAFDPYKSQVYVAINNSSNATY-TLGPDNTVSH 422
>gi|21233502|ref|NP_639419.1| polyvinylalcohol dehydrogenase [Xanthomonas campestris pv.
campestris str. ATCC 33913]
gi|21115354|gb|AAM43301.1| polyvinylalcohol dehydrogenase [Xanthomonas campestris pv.
campestris str. ATCC 33913]
Length = 539
Score = 187 bits (476), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 142/400 (35%), Positives = 208/400 (52%), Gaps = 53/400 (13%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAGKDISATPAVANGVVYFPSWNGYL 60
W GG N R+A GE IN T L+ W+ DISATP+V G +Y P W G L
Sbjct: 31 WPTAGGGYFNSRFAPGEWKINRTTAPTLKPAWTLTTTGDISATPSVEGGTLYVPDWGGTL 90
Query: 61 YAVNAFNGALIWEQNLSKLTG-----------LSGTGIVV-NVTVAVVVAVSRSNGELVW 108
Y+V+ +G W+ LS TG +SG I+V + V+A+ + G+L+W
Sbjct: 91 YSVDTQSGKPNWQAKLSDYTGNANSVTRNTPAISGKSIIVGDQASGTVMAIDKKTGKLLW 150
Query: 109 STQIDPRPRSQITMSGSVYMGAFYVGLSSLEEA-LPADQCCTFRGSLAKLDVRNGRIIWQ 167
S+ + P+++IT S +Y YVG+SS + L A+ +FRGS+ LD+ G+ +WQ
Sbjct: 151 SSVAESNPQARITSSPVIYGNRIYVGISSGDWGNLAANHTFSFRGSVVALDLNTGKKVWQ 210
Query: 168 TYMLPDNGGKRGGYSGAAVWGSSPAIDVIRRQ---------------------KQNNQTT 206
Y +P+ GY+GA+VWG AID I R+ ++ + +
Sbjct: 211 FYNVPE------GYTGASVWGQV-AIDPISRRLYFGTGNNYNIPAGVGNCVSNARSYRGS 263
Query: 207 KPTHPDQ--CISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLV-PNNPDCP--PG 261
+ T D+ C++ D Y +S+VAL++D+G++AWA GYD + +C+V P N CP
Sbjct: 264 ELTVQDELNCMAPDNYVDSVVALNLDTGKLAWADRAQGYDAWNLSCIVAPTNGLCPNTQA 323
Query: 262 PNL---DADFGEAPM-LLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDIIWFKLAGPGGR 317
NL D DFG A + L T+ +G+ + +V A QKSG WAFD +G +W GPGG
Sbjct: 324 TNLTGPDYDFGGAGVQLFTVWRDGKPQQLVGAGQKSGIYWAFDARTGAKVWSTQVGPGGT 383
Query: 318 EGGGVWGAATD--GRRVYTNIVNNDRIIWSTADPSNETAH 355
GG WG A D +VY I N+ + T P N +H
Sbjct: 384 TGGVEWGTAFDPYKSQVYVAINNSSNATY-TLGPDNTVSH 422
>gi|325917978|ref|ZP_08180145.1| glucose dehydrogenase [Xanthomonas vesicatoria ATCC 35937]
gi|325535801|gb|EGD07630.1| glucose dehydrogenase [Xanthomonas vesicatoria ATCC 35937]
Length = 576
Score = 187 bits (476), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 141/400 (35%), Positives = 206/400 (51%), Gaps = 53/400 (13%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAGKDISATPAVANGVVYFPSWNGYL 60
W GG N R+A GE IN TV+ L+ W+ DISATP+V G +Y P W G L
Sbjct: 68 WPTAGGGYFNSRFAPGEWKINRTTVKGLKPAWTLTTTGDISATPSVEGGTLYVPDWGGTL 127
Query: 61 YAVNAFNGALIWEQNLSKLTG-----------LSGTGIVVNVTVA-VVVAVSRSNGELVW 108
Y+V+ +G W+ LS TG +S I+V A V+A+ + G+L+W
Sbjct: 128 YSVDTQSGKPNWQAKLSDYTGNAASVTRNTPAISAKSIIVGDQAAGTVLAIDKKTGKLLW 187
Query: 109 STQIDPRPRSQITMSGSVYMGAFYVGLSSLEEA-LPADQCCTFRGSLAKLDVRNGRIIWQ 167
T + P+++IT S +Y YVG+SS + L + +FRGS+ LD+ G+ +WQ
Sbjct: 188 KTTAEANPQARITSSPVIYGNRIYVGISSGDWGNLAPNHTFSFRGSVVALDLNTGKKLWQ 247
Query: 168 TYMLPDNGGKRGGYSGAAVWGSSPAIDVIRRQ---------------------KQNNQTT 206
Y +P+ GY+GA+VWG AID I R+ ++ + +
Sbjct: 248 FYNVPE------GYTGASVWGQV-AIDPISRRLYFGTGNNYNIPQSVGNCVSNARSYRGS 300
Query: 207 KPTHPDQ--CISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLV-PNNPDCP--PG 261
+ T D+ C++ D Y +S+V+L++D+G++ WA GYD + +C+V P N CP
Sbjct: 301 ELTVQDELNCMAPDNYVDSVVSLNMDTGKLVWADRAQGYDAWNLSCIVAPTNGLCPNTQA 360
Query: 262 PNL---DADFGEAPM-LLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDIIWFKLAGPGGR 317
NL D DFG A + L T+ NG+ + +V A QKSG WAFD +G +W GPGG
Sbjct: 361 TNLTGPDYDFGGAGVQLFTVWRNGKPQQLVGAGQKSGIYWAFDAKTGAKVWSTQVGPGGT 420
Query: 318 EGGGVWGAATD--GRRVYTNIVNNDRIIWSTADPSNETAH 355
GG WG A D +VY I N+ + T P N +H
Sbjct: 421 TGGVEWGTAFDPYKSQVYVAINNSSNATY-TLGPDNTVSH 459
>gi|384425858|ref|YP_005635215.1| polyvinylalcohol dehydrogenase [Xanthomonas campestris pv. raphani
756C]
gi|341934958|gb|AEL05097.1| polyvinylalcohol dehydrogenase [Xanthomonas campestris pv. raphani
756C]
Length = 575
Score = 187 bits (476), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 142/400 (35%), Positives = 208/400 (52%), Gaps = 53/400 (13%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAGKDISATPAVANGVVYFPSWNGYL 60
W GG N R+A GE IN T L+ W+ DISATP+V G +Y P W G L
Sbjct: 67 WPTAGGGYFNSRFAPGEWKINRTTAPTLKPAWTLTTTGDISATPSVEGGTLYVPDWGGTL 126
Query: 61 YAVNAFNGALIWEQNLSKLTG-----------LSGTGIVV-NVTVAVVVAVSRSNGELVW 108
Y+V+ +G W+ LS TG +SG I+V + V+A+ + G+L+W
Sbjct: 127 YSVDTQSGKPNWQAKLSDYTGNANSVTRNTPAISGKSIIVGDQASGTVMAIDKKTGKLLW 186
Query: 109 STQIDPRPRSQITMSGSVYMGAFYVGLSSLEEA-LPADQCCTFRGSLAKLDVRNGRIIWQ 167
S+ + P+++IT S +Y YVG+SS + L A+ +FRGS+ LD+ G+ +WQ
Sbjct: 187 SSVAESNPQARITSSPVIYGNRIYVGISSGDWGNLAANHTFSFRGSVVALDLNTGKKVWQ 246
Query: 168 TYMLPDNGGKRGGYSGAAVWGSSPAIDVIRRQ---------------------KQNNQTT 206
Y +P+ GY+GA+VWG AID I R+ ++ + +
Sbjct: 247 FYNVPE------GYTGASVWGQV-AIDPISRRLYFGTGNNYNIPAGVGNCVSNARSYRGS 299
Query: 207 KPTHPDQ--CISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLV-PNNPDCP--PG 261
+ T D+ C++ D Y +S+VAL++D+G++AWA GYD + +C+V P N CP
Sbjct: 300 ELTVQDELNCMAPDNYVDSVVALNLDTGKLAWADRAQGYDAWNLSCIVAPTNGLCPNTQA 359
Query: 262 PNL---DADFGEAPM-LLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDIIWFKLAGPGGR 317
NL D DFG A + L T+ +G+ + +V A QKSG WAFD +G +W GPGG
Sbjct: 360 TNLTGPDYDFGGAGVQLFTVWRDGKPQQLVGAGQKSGIYWAFDARTGAKVWSTQVGPGGT 419
Query: 318 EGGGVWGAATD--GRRVYTNIVNNDRIIWSTADPSNETAH 355
GG WG A D +VY I N+ + T P N +H
Sbjct: 420 TGGVEWGTAFDPYKSQVYVAINNSSNTTY-TLGPDNTVSH 458
>gi|188993677|ref|YP_001905687.1| alcohol dehydrogenase (acceptor) [Xanthomonas campestris pv.
campestris str. B100]
gi|167735437|emb|CAP53652.1| exported putative alcohol dehydrogenase (acceptor) [Xanthomonas
campestris pv. campestris]
Length = 575
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 144/400 (36%), Positives = 207/400 (51%), Gaps = 53/400 (13%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAGKDISATPAVANGVVYFPSWNGYL 60
W GG N R+A GE IN T L+ W+ DISATP+V G +Y P W G L
Sbjct: 67 WPTAGGGYFNSRFAPGEWKINRTTAPTLKPAWTLTTTGDISATPSVEGGTLYVPDWGGTL 126
Query: 61 YAVNAFNGALIWEQNLSKLTG-----------LSGTGIVV-NVTVAVVVAVSRSNGELVW 108
Y+V+ +G W+ LS TG +SG I+V + V+A+ + G+L+W
Sbjct: 127 YSVDTQSGKPNWQAKLSDYTGNANSVTRNTPAISGKSIIVGDQASGTVMAIDKKTGKLLW 186
Query: 109 STQIDPRPRSQITMSGSVYMGAFYVGLSSLEEA-LPADQCCTFRGSLAKLDVRNGRIIWQ 167
S+ + P+++IT S +Y YVG+SS + L A+ +FRGS+ LD+ G+ +WQ
Sbjct: 187 SSVAESNPQARITSSPVIYGNRIYVGISSGDWGNLAANHTFSFRGSVVALDLNTGKKVWQ 246
Query: 168 TYMLPDNGGKRGGYSGAAVWGSSPAIDVIRRQ----KQNNQT-----------------T 206
Y +P+ GY+GA+VWG AID I R+ NN +
Sbjct: 247 FYNVPE------GYTGASVWGQV-AIDPISRRLYFGTGNNYNIPAGVGNCVSNARSYLGS 299
Query: 207 KPTHPDQ--CISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLV-PNNPDCP--PG 261
+ T D+ C++ D Y +S+VAL++D+G++AWA GYD + +C+V P N CP
Sbjct: 300 ELTVQDELNCMAPDNYVDSVVALNLDTGKLAWADRAQGYDAWNLSCIVAPTNGLCPNTQA 359
Query: 262 PNL---DADFGEAPM-LLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDIIWFKLAGPGGR 317
NL D DFG A + L T+ +G+ + +V A QKSG WAFD +G +W GPGG
Sbjct: 360 TNLTGPDYDFGGAGVQLFTVWRDGKPQQLVGAGQKSGIYWAFDARTGAKVWSTQVGPGGT 419
Query: 318 EGGGVWGAATD--GRRVYTNIVNNDRIIWSTADPSNETAH 355
GG WG A D +VY I N+ + T P N +H
Sbjct: 420 TGGVEWGTAFDPYKSQVYVAINNSSNATY-TLGPDNTVSH 458
>gi|21244916|ref|NP_644498.1| polyvinylalcohol dehydrogenase [Xanthomonas axonopodis pv. citri
str. 306]
gi|21110630|gb|AAM39034.1| polyvinylalcohol dehydrogenase [Xanthomonas axonopodis pv. citri
str. 306]
Length = 501
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 136/391 (34%), Positives = 203/391 (51%), Gaps = 53/391 (13%)
Query: 10 NRRYAYGEVLINPVTVRNLRLRWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGA 69
N R+A GE IN T + L+ W+ DISATP+V G +Y P W G LY+V+ G
Sbjct: 2 NSRFAPGEWKINRTTAKTLKPAWTLTTTGDISATPSVEGGTLYVPDWGGTLYSVDTQTGK 61
Query: 70 LIWEQNLSKLTG-----------LSGTGIVVNVTVA-VVVAVSRSNGELVWSTQIDPRPR 117
W+ LS TG +S I+V VA ++A+ + G+L+W T ++ P+
Sbjct: 62 PNWQAKLSDYTGNANSVTRNTPAISAKSIIVGDQVAGTLLALDKKTGKLLWKTTVEANPQ 121
Query: 118 SQITMSGSVYMGAFYVGLSSLEEA-LPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNGG 176
++IT S +Y YVG+SS + L A+ +FRGS+ +D+ G+ +WQ Y +P+
Sbjct: 122 ARITSSPVIYGNRIYVGVSSGDWGNLAANHTFSFRGSVVAVDLNTGKKVWQFYNVPE--- 178
Query: 177 KRGGYSGAAVWGSSPAIDVIRRQ---------------------KQNNQTTKPTHPDQ-- 213
GY+GA+VWG AID I R+ ++ + ++ T D+
Sbjct: 179 ---GYTGASVWGQV-AIDPINRRLYFGTGNNYNIPQGVGNCISNARSYRGSELTVQDELD 234
Query: 214 CISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLV-PNNPDCP--PGPNL---DAD 267
C++ D Y +S+++L++D+G++ WA GYD + +C+V P N CP NL D D
Sbjct: 235 CMAPDNYVDSVISLNLDTGKLVWANRAQGYDAWNLSCVVAPTNGLCPNTQATNLTGPDYD 294
Query: 268 FGEAPM-LLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDIIWFKLAGPGGREGGGVWGAA 326
FG A + L + NGR + +V A QKSG WAFD +G +W GPGG GG WG A
Sbjct: 295 FGGAGVQLFAVPRNGRLQQLVGAGQKSGIYWAFDAKTGAKVWSTQVGPGGTTGGVEWGTA 354
Query: 327 TD--GRRVYTNIVNNDRIIWSTADPSNETAH 355
D ++Y I NN + T P+N H
Sbjct: 355 FDPYKSQIYVAINNNSNATY-TLGPANVQTH 384
>gi|78049856|ref|YP_366031.1| polyvinylalcohol dehydrogenase [Xanthomonas campestris pv.
vesicatoria str. 85-10]
gi|78038286|emb|CAJ26031.1| putative polyvinylalcohol dehydrogenase [Xanthomonas campestris pv.
vesicatoria str. 85-10]
Length = 501
Score = 186 bits (471), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 135/391 (34%), Positives = 203/391 (51%), Gaps = 53/391 (13%)
Query: 10 NRRYAYGEVLINPVTVRNLRLRWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGA 69
N R+A GE IN T + L+ W+ DISATP+V G +Y P W G LY+V+ G
Sbjct: 2 NSRFAPGEWKINRTTAKTLKPAWTLTTTGDISATPSVEGGTLYVPDWGGTLYSVDTQTGK 61
Query: 70 LIWEQNLSKLTG-----------LSGTGIVVNVTVA-VVVAVSRSNGELVWSTQIDPRPR 117
W+ LS TG +S I+V VA ++A+ + G+L+W T ++ P+
Sbjct: 62 PNWQAKLSDYTGNANSVTRNTPAISAKSIIVGDQVAGTLLALDKKTGKLLWKTTVEANPQ 121
Query: 118 SQITMSGSVYMGAFYVGLSSLEEA-LPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNGG 176
+++T S +Y YVG+SS + L A+ +FRGS+ +D+ G+ +WQ Y +P+
Sbjct: 122 ARVTSSPVIYGNRIYVGVSSGDWGNLAANHTFSFRGSVVAVDLNTGKKVWQFYNVPE--- 178
Query: 177 KRGGYSGAAVWGSSPAIDVIRRQ---------------------KQNNQTTKPTHPDQ-- 213
GY+GA+VWG AID I R+ ++ + ++ T D+
Sbjct: 179 ---GYTGASVWGQV-AIDPINRRLYFGTGNNYNIPQGVGNCISNARSYRGSELTVQDELN 234
Query: 214 CISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLV-PNNPDCP--PGPNL---DAD 267
C++ D Y +S+++L++D+G++ WA GYD + +C+V P N CP NL D D
Sbjct: 235 CMAPDNYVDSVISLNLDTGKLIWANRAQGYDAWNLSCIVAPTNGLCPNTQATNLTGPDYD 294
Query: 268 FGEAPM-LLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDIIWFKLAGPGGREGGGVWGAA 326
FG A + L + NGR + +V A QKSG WAFD +G +W GPGG GG WG A
Sbjct: 295 FGGAGVQLFAVPRNGRLQQLVGAGQKSGIYWAFDAKTGAKVWSTQVGPGGTTGGVEWGTA 354
Query: 327 TD--GRRVYTNIVNNDRIIWSTADPSNETAH 355
D ++Y I NN + T P+N H
Sbjct: 355 FDPYKSQIYVAINNNSNATY-TLGPANVQTH 384
>gi|289670728|ref|ZP_06491803.1| polyvinylalcohol dehydrogenase [Xanthomonas campestris pv.
musacearum NCPPB 4381]
Length = 559
Score = 186 bits (471), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 136/400 (34%), Positives = 204/400 (51%), Gaps = 53/400 (13%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAGKDISATPAVANGVVYFPSWNGYL 60
W GG N R+A G+ IN T + L+ W+ DISATP+V G +Y P W G L
Sbjct: 56 WTTAGGGYLNSRFAPGDWKINRTTAKTLKPAWTLTTTGDISATPSVEGGTLYVPDWGGTL 115
Query: 61 YAVNAFNGALIWEQNLSKLTG-----------LSGTGIVVNVTVA-VVVAVSRSNGELVW 108
Y+V+ G W+ LS TG +S I+V VA ++A+ + G+L+W
Sbjct: 116 YSVDTQTGKPNWQAKLSDYTGNANSVTRNTPAISAKSIIVGDQVAGTLLALDKKTGKLLW 175
Query: 109 STQIDPRPRSQITMSGSVYMGAFYVGLSSLEEA-LPADQCCTFRGSLAKLDVRNGRIIWQ 167
T+++ P+++IT S +Y YVG+SS + L + +FRGS+ +D+ G+ +WQ
Sbjct: 176 KTKVEANPQARITSSPVIYGNRIYVGVSSGDWGNLAVNHSFSFRGSVVAVDLNTGKKVWQ 235
Query: 168 TYMLPDNGGKRGGYSGAAVWGSSPAIDVIRRQ---------------------KQNNQTT 206
Y +P+ GY+GA+VWG AID I R+ ++ + +
Sbjct: 236 FYNVPE------GYTGASVWGQV-AIDPISRRLYFGTGNNYNIPQGVGNCISNARSYRGS 288
Query: 207 KPTHPDQ--CISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTC-LVPNNPDCP--PG 261
+ T D+ C++ D Y +S+++L++D+G + WA GYD + +C + P N CP
Sbjct: 289 ELTVQDELNCMAPDNYVDSVISLNLDTGTLVWANRAQGYDAWNLSCVMAPTNSLCPNTQA 348
Query: 262 PNL---DADFGEAPM-LLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDIIWFKLAGPGGR 317
NL D DFG A + L + NG+ + +V A QKSG WAFD +G +W GPGG
Sbjct: 349 TNLTGPDYDFGGAGVQLFAVPRNGKLQQLVRAGQKSGIYWAFDAKTGAKVWSTQVGPGGT 408
Query: 318 EGGGVWGAATD--GRRVYTNIVNNDRIIWSTADPSNETAH 355
GG WG A D +VY I NN + T P+N H
Sbjct: 409 TGGVEWGTAFDPYKSQVYVAINNNSNATY-TLGPANVQTH 447
>gi|381173506|ref|ZP_09882595.1| PQQ enzyme repeat family protein [Xanthomonas citri pv.
mangiferaeindicae LMG 941]
gi|380686034|emb|CCG39082.1| PQQ enzyme repeat family protein [Xanthomonas citri pv.
mangiferaeindicae LMG 941]
Length = 501
Score = 184 bits (468), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 135/391 (34%), Positives = 203/391 (51%), Gaps = 53/391 (13%)
Query: 10 NRRYAYGEVLINPVTVRNLRLRWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGA 69
N R+A GE IN T + L+ W+ DISATP+V G +Y P W G LY+V+ G
Sbjct: 2 NSRFAPGEWKINRTTAKTLKPAWTLTTTGDISATPSVEGGTLYVPDWGGTLYSVDTQTGK 61
Query: 70 LIWEQNLSKLTG-----------LSGTGIVVNVTVA-VVVAVSRSNGELVWSTQIDPRPR 117
W+ LS TG +S I+V VA ++A+ + G+L+W T ++ P+
Sbjct: 62 PNWQAKLSDYTGNANSVTRNTPAISAKSIIVGDQVAGTLLALDKKTGKLLWKTTVEANPQ 121
Query: 118 SQITMSGSVYMGAFYVGLSSLEEA-LPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNGG 176
++IT S ++ YVG+SS + L A+ +FRGS+ +D+ G+ +WQ Y +P+
Sbjct: 122 ARITSSPVIHGNRIYVGVSSGDWGNLAANHTFSFRGSVVAVDLNTGKKVWQFYNVPE--- 178
Query: 177 KRGGYSGAAVWGSSPAIDVIRRQ---------------------KQNNQTTKPTHPDQ-- 213
GY+GA+VWG AID I R+ ++ + ++ T D+
Sbjct: 179 ---GYTGASVWGQV-AIDPINRRLYFGTGNNYNIPQGVGNCISNARSYRGSELTVQDELD 234
Query: 214 CISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLV-PNNPDCP--PGPNL---DAD 267
C++ D Y +S+++L++D+G++ WA GYD + +C+V P N CP NL D D
Sbjct: 235 CMAPDNYVDSVISLNLDTGKLVWANRAQGYDAWNLSCVVAPTNGLCPNTQATNLTGPDYD 294
Query: 268 FGEAPM-LLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDIIWFKLAGPGGREGGGVWGAA 326
FG A + L + NGR + +V A QKSG WAFD +G +W GPGG GG WG A
Sbjct: 295 FGGAGVQLFAVPRNGRLQQLVGAGQKSGIYWAFDAKTGAKVWSTQVGPGGTTGGVEWGTA 354
Query: 327 TD--GRRVYTNIVNNDRIIWSTADPSNETAH 355
D ++Y I NN + T P+N H
Sbjct: 355 FDPYKSQIYVAINNNSNATY-TLGPANVQTH 384
>gi|402082854|gb|EJT77872.1| hypothetical protein GGTG_02975 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 568
Score = 184 bits (466), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 140/456 (30%), Positives = 203/456 (44%), Gaps = 83/456 (18%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSF-YAGKDISATPAVANGVVYFPSWNGY 59
WL G N R+A + +++ + NL S Y+G SA P V GV Y+P++ G
Sbjct: 52 WLGWGAGPYNNRWAASDAVVSTKNIANLTKVCSVPYSGAGQSAAPLVTGGVAYYPTFTGL 111
Query: 60 LYAVNAFNGALIWEQNLSKLT--------------------GLSGTGIVV---NVTVAVV 96
L A++ + +W N++++ L G V+ + A+V
Sbjct: 112 LVALDYQACSEVWSINVTRIIEDFGPVPIEYAKPMVSRTTPALDKDGDVLFIGTLAHALV 171
Query: 97 VAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPA-DQCCTFRGSLA 155
+A+ RS+G L+ S Q+D P + +T S + Y G Y G+SS E +P+ CC+F GSL
Sbjct: 172 LAIDRSSGRLIDSIQLDTNPYAILTQSQTFYGGRLYAGVSSTESVVPSVGACCSFVGSLN 231
Query: 156 KLDVRNGRI--IWQTYMLPDNGGKRGGYSGAAVWGSSPAIDVIRRQ-------------- 199
+ + GR+ W LP GAAVWGS P+ID IR+Q
Sbjct: 232 AVSLVGGRLRHEWGVQTLPHTSPANADLGGAAVWGSQPSIDPIRKQVFFGSGNLYNIPPD 291
Query: 200 -----KQNNQTTKPTH----PDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTC 250
+Q + D C+ + Y +SI+A+D+++GR+ WAK LG D + C
Sbjct: 292 FVDCVRQTANISIIEQGLVGRDPCLPIETYQDSIMAVDLETGRVNWAKQLGQLDAWNAGC 351
Query: 251 L-----VPNNPDCPPGPNLDADFGEAPMLLTISTNGRF-RDVVVAVQKSGFAWAFDRDSG 304
P CP P DADFG AP + S +D++VA QKSG +A +G
Sbjct: 352 FEGFAAAPGT--CPETPGPDADFGMAPTFVPGSPETPAGQDIIVAGQKSGKLYALYAQTG 409
Query: 305 DIIWFKLAGPGGREGGGVWGAATDGRRVYTNIVNND------------------------ 340
+ W GPGG EGG WG A D + VY N+D
Sbjct: 410 TVAWAIQTGPGGLEGGLTWGVAVDDKAVYFTNTNSDRKPFTMPDGQVISNSAFGAASLKD 469
Query: 341 -RIIWSTADPSNETAHGPVTVVNGVLFAGSVSANGS 375
RI+W T P N + TVVN V+ G+ A G
Sbjct: 470 GRILWLTPAPDNHDSFVAPTVVNDVVLTGTTGARGE 505
>gi|429852871|gb|ELA27985.1| pyrrolo-quinoline quinone [Colletotrichum gloeosporioides Nara gc5]
Length = 548
Score = 181 bits (459), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 136/440 (30%), Positives = 202/440 (45%), Gaps = 85/440 (19%)
Query: 35 YAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSK-------LTGLS-GTG 86
Y +SA+P V +G+ Y+ +W G L A++ + + W N+++ LT + +G
Sbjct: 67 YEPAGVSASPLVVDGIAYYLTWTGLLVALDYKSCHVQWTANITQMILDFAPLTDIQRASG 126
Query: 87 I----------------VVNVTVAVVVAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGA 130
+ + + A+V+A+ R G LV QID P + IT S + Y G
Sbjct: 127 VNPVSRSSPVTDGDHLFIGTLAHALVLAIDRETGSLVSHLQIDDHPVAMITQSPTWYAGQ 186
Query: 131 FYVGLSSLE---EALPADQCCTFRGSLAKLDVRNG--RIIWQTYMLPDNGGKRGG-YSGA 184
VG SS E +L +CC GS+ + + +G +++W+T M+ G +SGA
Sbjct: 187 LLVGASSFEVISASLANYKCCDHVGSMNSVALEDGILKLLWKTMMMTQPENFTGDPFSGA 246
Query: 185 AVWGSSPAIDVIRR-------------------QKQNNQTTKPTHPDQCISSDIYANSIV 225
+VWGSSP +D IR Q +NQ PD C+ DIY S++
Sbjct: 247 SVWGSSPVVDTIRNCVYIATGNTHSVPDEVAACQLASNQNGT-VLPDPCLPPDIYQESVL 305
Query: 226 ALDIDSGRIAWAKPLGGYDIFYFTCLV-PNNPDCPPGPNLDADFGEAPMLL----TISTN 280
ALD+ G I W + LG D + C++ P +CPP LD+DFG P L+ + N
Sbjct: 306 ALDLVIGSIKWVRQLGVLDAWNLACVLNPRGAECPPVVGLDSDFGMGPTLVPGAGAKTPN 365
Query: 281 GRFRDVVVAVQKSGFAWAFDRDSGDIIWFKLAGPGGREGGGVWGAATDGRRVYTNIVNND 340
G+ D++V QK+G + D +SG+++W A P G EGG WG A D VY +NN
Sbjct: 366 GK--DLIVIGQKNGNLYGIDAESGEVLWLTKASPAGLEGGLSWGIAADHVAVYFTAINNA 423
Query: 341 R-------------------------IIWSTADPSNETAHGPVTVVNGVLFAGSVSANGS 375
R I+W TA P++ + TVVN VL GS G
Sbjct: 424 RTPYALANGQIIQNAAFGAAALADGKILWKTASPNDTASMIAPTVVNDVLVTGS---TGR 480
Query: 376 TVYGGVPASYGCIYLGNGYT 395
T G P G + L + T
Sbjct: 481 TGENGFPQGPGSLVLLDKLT 500
>gi|325919838|ref|ZP_08181830.1| glucose dehydrogenase [Xanthomonas gardneri ATCC 19865]
gi|325549704|gb|EGD20566.1| glucose dehydrogenase [Xanthomonas gardneri ATCC 19865]
Length = 576
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 135/400 (33%), Positives = 205/400 (51%), Gaps = 53/400 (13%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAGKDISATPAVANGVVYFPSWNGYL 60
W GG N R+A GE IN T + L+ W+ DISATP+V G +Y P W G L
Sbjct: 68 WPIAGGGYFNSRFAPGEWKINRTTAKTLKPAWTLTTTGDISATPSVEGGTLYVPDWGGTL 127
Query: 61 YAVNAFNGALIWEQNLSKLTGLS------------GTGIVVNVTVAVVVAVSRSNGELVW 108
Y+V+ G W+ LS TG S + I+ +++ V+A+ + G+L+W
Sbjct: 128 YSVDTQTGKPNWQAKLSDYTGKSTSLSRTTPAITPKSIILGDMSGGTVLALDKKTGKLLW 187
Query: 109 STQIDPRPRSQITMSGSVYMGAFYVGLSSLE-EALPADQCCTFRGSLAKLDVRNGRIIWQ 167
++++ P++QIT S VY Y+G+SS + E+L +FRGS+ LD+ G+ +WQ
Sbjct: 188 KSEVETNPQAQITSSPVVYGNRIYLGVSSRDYESLDPTHRFSFRGSVVALDLNTGKKVWQ 247
Query: 168 TYMLPDNGGKRGGYSGAAVWGSSPAIDVIRRQ---------------------KQNNQTT 206
Y P+ GY+GA+ WG AID I R+ ++ + +
Sbjct: 248 FYNAPE------GYTGASTWGQV-AIDPIARRLYFGTGNNYNIPQSVGNCVSNARSYRGS 300
Query: 207 KPTHPDQ--CISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLV-PNNPDCP--PG 261
T D+ C++ D Y +S+++L++D+G++ WA GYD + +C+V P N CP
Sbjct: 301 ALTVQDELDCMAPDNYVDSVISLNLDTGKLVWANRAQGYDAWNLSCIVAPTNGLCPNTQA 360
Query: 262 PNL---DADFGEAPM-LLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDIIWFKLAGPGGR 317
NL D DFG A + L T+ +G+ + ++ A QKSG WAFD +G +W GPGG
Sbjct: 361 TNLTGPDYDFGGAGVQLFTVWRDGKPQQLIGAGQKSGIYWAFDAKTGAKVWSTQVGPGGT 420
Query: 318 EGGGVWGAATD--GRRVYTNIVNNDRIIWSTADPSNETAH 355
GG WG A D +VY I N+ + T P+N H
Sbjct: 421 TGGVEWGTAFDPYKSQVYVAINNSSNASY-TLGPANTERH 459
>gi|110556567|dbj|BAE98075.1| putative polyvinylalcohol dehydrogenase [Streptoalloteichus
hindustanus]
Length = 561
Score = 178 bits (452), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 157/508 (30%), Positives = 221/508 (43%), Gaps = 116/508 (22%)
Query: 7 DLNNRRYAYGEVLINPVTVRNLRLRWSFYA--------GKDISA--TPAVANGVVYFPSW 56
DL+ R E I P V NLRL+W+F G ++A PAV NGV YF S
Sbjct: 67 DLSGSRSNRAERRITPDNVENLRLKWAFTHPQPKGLPDGVRLTARSQPAVVNGVAYFGST 126
Query: 57 NGYLYAVNAFNGALIWEQNLSKLT------------GLSGTGIVVNVTVAVVVAVSRSNG 104
+G YAVNA G WE +L+++ +SG I + AV + +G
Sbjct: 127 DGKFYAVNARTGKTKWELDLNEVNSGSGFTAVRNSPAVSGGKIFFGDYAGHLYAVDQKSG 186
Query: 105 ELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQ-CCTFRGSLAKLDVRNGR 163
ELVWST+ID P+ T S V+ G YVG+SS E + CCTFRG + LD G
Sbjct: 187 ELVWSTKIDNHPQGLTTSSPIVHGGRVYVGVSSAENTGGIETACCTFRGHVDALDANTGA 246
Query: 164 IIWQTYMLPD--------NGGKRGGYSGAAVWGSSPAIDVIRRQ----KQNNQTTKPTHP 211
++W+ Y +P+ NG R SG VW SSP ID R N T K
Sbjct: 247 LVWRHYTVPEAKAVGTWPNGATRYEPSGGGVW-SSPVIDPSTRTLYVGTGQNYTGKEGET 305
Query: 212 DQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPD--CP---PGPNLDA 266
D +++ALDI +G + W + + D++ C P+ P CP G LD
Sbjct: 306 D----------TVLALDIANGEVRWKRQMTFPDVWRQVCADPSAPPGYCPGAKEGAALDY 355
Query: 267 DFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDIIWFKLAG---PGGREGGGVW 323
DFG P + S NG R +V QK+G FD +G+++W + G P G GG W
Sbjct: 356 DFGAMPNIF--SANG--RKLVGIGQKNGMYHVFDAHTGEVVWQRQLGKPWPNGGVGGIQW 411
Query: 324 GAATDGRRVYTNIVNND------------RIIWSTADPSNETAHG--------------- 356
GA+ DG+R+Y D R +W T P+N + G
Sbjct: 412 GASYDGKRLYVATWFADPGSLFALDPATGRTLWETKHPANGCSTGGAAKHPEVCALANTP 471
Query: 357 PVTVVNGVLFAGS------------------------------VSANGSTVYGGVPASYG 386
V+ G+++ GS ++ +G + GG + G
Sbjct: 472 AVSTSPGLVYEGSADGKMRAYSAENGKVLWEFDTIREFQGVNGLTGHGQGISGGAVIADG 531
Query: 387 CIYLGNGYTVSLGKFHPTWTPGTSLYAF 414
+Y+ +GY G+F+PT G+ L AF
Sbjct: 532 VLYVNSGYFGQYGRFYPT-DKGSVLLAF 558
>gi|367053369|ref|XP_003657063.1| hypothetical protein THITE_122540 [Thielavia terrestris NRRL 8126]
gi|347004328|gb|AEO70727.1| hypothetical protein THITE_122540 [Thielavia terrestris NRRL 8126]
Length = 503
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 131/427 (30%), Positives = 189/427 (44%), Gaps = 65/427 (15%)
Query: 10 NRRYAYGEVLINPVTVRNLRLRWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGA 69
N +A +N TV +L L SA PA+ V Y+P++NG A+N +
Sbjct: 35 NNHWAADNHDLNSTTVSSLSLHCKIPDSVGQSAPPAIRGEVAYYPTYNGSFVALNYSSCE 94
Query: 70 LIWEQNLSKLT----GLSGTGIVVNVTV---------------------AVVVAVSRSNG 104
++W N++++ +S ++VN + A++VA ++G
Sbjct: 95 VLWRINVTQVLVNFRAISALQLLVNTPISRTSPQIDTANNVIYFGTQIHALLVAADLTSG 154
Query: 105 ELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALP-----ADQCCTFRGSLAKLDV 159
++ TQ +P + IT S + Y G VG+SS EE QCC+F G+ A
Sbjct: 155 TVLGVTQTNPHELATITTSPTFYDGLVIVGVSSGEEDAAFFSNGTYQCCSFIGNAAAFRF 214
Query: 160 -RNGR------IIWQTYMLPDNGGKRGG---YSGAAVWGSSPAIDVIRRQ---KQNNQTT 206
R GR IW +P N G +SGAA+WGS P+IDV RRQ N +
Sbjct: 215 KRTGRSTGRFTTIWNVTTIPTNLPPANGTSQWSGAAIWGSQPSIDVRRRQVFFATGNMYS 274
Query: 207 KPT-------HPD-QCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTC----LVPN 254
P PD C S I+ S++A D+ +G W + L D + C L N
Sbjct: 275 VPDAYAHCVDDPDVHCFPSYIWQESVLAFDLYTGHANWVRRLDSLDAWTLVCGGGGLPRN 334
Query: 255 NPDCPPGPNLDADFGEAPMLLTISTNGRF---RDVVVAVQKSGFAWAFDRDSGDIIWFKL 311
CP P DADFG AP + + R RD++ QKSG + DSGD++W L
Sbjct: 335 TTLCPQNPGTDADFGMAPTFIPGGSGSRTPQGRDLLAVGQKSGVLYGLAADSGDVLWSTL 394
Query: 312 AGPGGREGGGVWGAATDGRRVYTNIVNNDRIIWSTADPSNETAHGPVTVVNGVLFAGSVS 371
PG G WG A D RRVY +N+ + W P N TA VN +F +
Sbjct: 395 TSPGSELAGLSWGVAADDRRVYYTGINDGQKTW-VLQPQNTTA------VNNSIFGAADL 447
Query: 372 ANGSTVY 378
+GS ++
Sbjct: 448 RDGSLLW 454
>gi|384217948|ref|YP_005609114.1| polyvinyl-alcohol dehydrogenase [Bradyrhizobium japonicum USDA 6]
gi|354956847|dbj|BAL09526.1| polyvinyl-alcohol dehydrogenase [Bradyrhizobium japonicum USDA 6]
Length = 610
Score = 160 bits (406), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 111/366 (30%), Positives = 180/366 (49%), Gaps = 37/366 (10%)
Query: 1 WLNHGGDLNNRRYAYGEVL-INPVTVRNLRLRWSF-YAGKDIS-ATPAVANGVVYFPSWN 57
W G DLNN R+ ++ + V LRL+W++ + G +S A P + G+++ +
Sbjct: 119 WNGWGVDLNNSRFQPADMAGLTAAQVPRLRLKWAYAFPGASVSFAPPTIVGGLLFIGGTD 178
Query: 58 GYLYAVNAFNGALIW----------EQNLSKLTGLSGTGIVVNVTVAVVVAVSRSNGELV 107
++A++A G +W ++ L G I A AV+ G L+
Sbjct: 179 RKVHALDARTGCTLWTFAIDAAVRAAITVAPLPGSDQFAIFFGDLRANAYAVNALTGALI 238
Query: 108 WSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPAD---QCCTFRGSLAKLDVRNGRI 164
W T+++ P ++IT + ++ G YV +SSLEEA + +CCTFRGS+ L+ G+
Sbjct: 239 WKTKVEEHPAARITGAPVLHSGVLYVPVSSLEEAAGSQASYECCTFRGSVVALEAATGKP 298
Query: 165 IWQTYMLPD---------NGGKRGGYSGAAVWGSSPAIDVIRRQKQNNQTTKPTHPDQCI 215
+WQ Y +P+ G + G SGAA+W S+P IDV R + ++P
Sbjct: 299 VWQAYTIPEVPHPTDKNAKGVQLFGPSGAAIW-SAPTIDVKRGAIYVATSNSYSNPPSAT 357
Query: 216 SSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLL 275
S ++I+A D+ +G++ W++ D + C + +CP D DFG++P+L+
Sbjct: 358 S-----DAILAFDLATGKLLWSQQATPKDAYVVACYGVDKTNCPEDHGPDHDFGQSPILV 412
Query: 276 TISTNGRFRDVVVAVQKSGFAWAFD-RDSGDIIWFKLAGPGGREGGGVWGAATDGRRVYT 334
T+ R V+ QKSG D D G I+W G GG GG WG+A D R+Y
Sbjct: 413 TLRDG---RRVLAIAQKSGVVHGLDPDDGGKILWQTRIGKGGALGGSEWGSAADQDRIY- 468
Query: 335 NIVNND 340
+ N+D
Sbjct: 469 -VANSD 473
>gi|374576307|ref|ZP_09649403.1| glucose dehydrogenase [Bradyrhizobium sp. WSM471]
gi|374424628|gb|EHR04161.1| glucose dehydrogenase [Bradyrhizobium sp. WSM471]
Length = 612
Score = 157 bits (398), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 111/366 (30%), Positives = 177/366 (48%), Gaps = 37/366 (10%)
Query: 1 WLNHGGDLNNRRYA-YGEVLINPVTVRNLRLRWSF-YAGKDIS-ATPAVANGVVYFPSWN 57
W G D N R+ G + V LRL+W++ + G +S A P + G+++ +
Sbjct: 120 WNGWGVDAGNSRFQPAGMAGLTAEEVPRLRLKWAYAFPGASVSFAPPTIVGGLLFIGGTD 179
Query: 58 GYLYAVNAFNGALIWEQ----------NLSKLTGLSGTGIVVNVTVAVVVAVSRSNGELV 107
++A++A +G +W + L G I A AV+ G L+
Sbjct: 180 RKVHALDARSGCTLWTLPTDAAVRAAISFGPLPGTDRFAIFFGDLRANAYAVNALTGALI 239
Query: 108 WSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPAD---QCCTFRGSLAKLDVRNGRI 164
W T+I+ P ++IT + +++ G YV +SSLEEA + +CCTFRGS+ L+ G+
Sbjct: 240 WKTKIEEHPAARITGAPTLHSGVLYVPVSSLEEAAGSQASYECCTFRGSVVALEAVTGKQ 299
Query: 165 IWQTYMLPD---------NGGKRGGYSGAAVWGSSPAIDVIRRQKQNNQTTKPTHPDQCI 215
+WQ Y +P+ G + G SGAAVW S+P ID R + ++P
Sbjct: 300 VWQAYTIPEVPHPTGKNARGTQLFGPSGAAVW-SAPTIDPKRNAVYVATSNSYSNPPAAT 358
Query: 216 SSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLL 275
A++++A ++ +G++ W + D F C + +CP D DFG++P+L+
Sbjct: 359 -----ADAVLAFELATGKLLWKQQATPSDAFIVACFGADKTNCPEDHGPDHDFGQSPILV 413
Query: 276 TISTNGRFRDVVVAVQKSGFAWAFD-RDSGDIIWFKLAGPGGREGGGVWGAATDGRRVYT 334
T+ R V+ QKSG A D D G I+W G GG GG WG+A D R+Y
Sbjct: 414 TLRDG---RRVLAIAQKSGVVHALDPDDGGKILWQTRIGKGGALGGSEWGSAADQDRIY- 469
Query: 335 NIVNND 340
+ N+D
Sbjct: 470 -VANSD 474
>gi|27380615|ref|NP_772144.1| polyvinyl-alcohol dehydrogenase [Bradyrhizobium japonicum USDA 110]
gi|27353780|dbj|BAC50769.1| bll5504 [Bradyrhizobium japonicum USDA 110]
Length = 635
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 109/366 (29%), Positives = 179/366 (48%), Gaps = 37/366 (10%)
Query: 1 WLNHGGDLNNRRYAYGEVL-INPVTVRNLRLRWSF-YAGKDIS-ATPAVANGVVYFPSWN 57
W G D N R+ ++ + V LRL+W++ + G +S A P + G+++ +
Sbjct: 143 WNGWGVDAGNSRFQPADMAGLTAEEVPRLRLKWAYAFPGASVSFAPPTIMGGLLFIGGTD 202
Query: 58 GYLYAVNAFNGALIW----------EQNLSKLTGLSGTGIVVNVTVAVVVAVSRSNGELV 107
++A++A +G +W + + L G I A AV+ G L+
Sbjct: 203 RKVHALDARSGCTLWTFATDAAVRAAISFAPLPGTDQFVIFFGDLRANAYAVNALTGALI 262
Query: 108 WSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPAD---QCCTFRGSLAKLDVRNGRI 164
W T+++ P ++IT + +++ G YV +SSLEEA + +CCTFRGS+ L+ G+
Sbjct: 263 WKTKVEEHPAARITGAPTLHSGVLYVPVSSLEEAAGSQASYECCTFRGSVVALEAVTGKP 322
Query: 165 IWQTYMLPD---------NGGKRGGYSGAAVWGSSPAIDVIRRQKQNNQTTKPTHPDQCI 215
+WQ Y +P+ G + G SGAAVW S+P +D R + ++P
Sbjct: 323 VWQAYTIPEVPHPTGKNTKGTQLFGPSGAAVW-SAPTVDPKRNAVYVATSNSYSNPPAAT 381
Query: 216 SSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLL 275
A++I+A ++ +G++ W + D F C + +CP D DFG++P+L+
Sbjct: 382 -----ADAILAFELATGKLLWKQQATPKDAFIVACYGADRTNCPDEHGPDHDFGQSPILV 436
Query: 276 TISTNGRFRDVVVAVQKSGFAWAFD-RDSGDIIWFKLAGPGGREGGGVWGAATDGRRVYT 334
T+ R V+ QKSG A D D G I+W G GG GG WG+A D R+Y
Sbjct: 437 TLRDG---RRVLAIAQKSGVVHALDPDDGGKILWQTRIGKGGALGGSEWGSAADQDRIY- 492
Query: 335 NIVNND 340
+ N+D
Sbjct: 493 -VANSD 497
>gi|225936760|emb|CAQ52613.1| PQQ-dependent enzyme [Streptomyces violaceoruber]
Length = 543
Score = 154 bits (390), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 139/438 (31%), Positives = 197/438 (44%), Gaps = 65/438 (14%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSF----YAGKDISATPAVANGVVYFPSW 56
W + DL RY E I P TV LRL+WSF +G PAV G VY
Sbjct: 48 WPSFQKDLAGSRYNGAERSITPHTVGGLRLKWSFAFPYVSGAVPQGQPAVVGGSVYVGGP 107
Query: 57 NGYLYAVNAFNGALIWEQNLSKLTG------------LSGTGIVVNVTVAVVVAVSRSNG 104
+G LYA++A G +W +L+ +SG IV T + AV RS G
Sbjct: 108 DGRLYALDARGGRTLWTFSLASAAPDAAKAVVRNSPVVSGGRIVFGDTQGRLYAVRRSTG 167
Query: 105 ELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPAD-QCCTFRGSLAKLDVRNGR 163
EL+W+T++D P + +T S V+ G ++G+SS E D CCTFRG + LDV +G
Sbjct: 168 ELLWTTRLDSHPSAMLTGSPVVHRGKVFIGVSSGENVGGTDYACCTFRGHIDALDVTDGS 227
Query: 164 IIWQTYMLPD--------NGGKRGGYSGAAVWGSSPAIDVIRRQKQNNQTTKPTHPDQCI 215
+ W+ Y +P+ +G KR SG +VW SSP +D T
Sbjct: 228 LAWRHYTVPEPRPAGTWPSGAKRYEPSGGSVW-SSPTVD------PRTGTVYVGTGQNYT 280
Query: 216 SSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPD--CP---PGPNLDADFGE 270
++ +S++ALD +G + W + + D + C PN P CP G LD D G
Sbjct: 281 GTEGETDSVLALDTGTGAVRWTRQMTHPDTWRLLCNQPNTPPEYCPGNADGTALDYDLGA 340
Query: 271 APMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDIIW---FKLAGPGGREGGGV-WGAA 326
P L T+ R +V QKSG D +G+I+W + PG G+ WGAA
Sbjct: 341 HPNLFTVDG----RPLVGIGQKSGVYHVLDARTGEIVWQRRLSVPRPGDMGLSGIQWGAA 396
Query: 327 TDGRRVY--TNIVN----------NDRIIWSTADPSNETAHGPVTVVNGVLFAGSVSANG 374
DGRR+Y TN + ++W + +P++ G V F VSA
Sbjct: 397 YDGRRLYVATNRAEPGTLFALDPASGELLWESPNPADGCTTGGAAAHPDVCFPALVSA-- 454
Query: 375 STVYGGVPASYGCIYLGN 392
V A+ G +Y G+
Sbjct: 455 ------VSATPGLVYEGS 466
>gi|440800434|gb|ELR21473.1| protein kinase domain containing protein [Acanthamoeba castellanii
str. Neff]
Length = 819
Score = 154 bits (390), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 122/415 (29%), Positives = 195/415 (46%), Gaps = 87/415 (20%)
Query: 48 NGVVYF--PSWNGYLYAVNAFNGALIWEQNLSKLTGLSGT----GIVVNVTVAVVVAVSR 101
NG +YF PS +G L ++NA GA W ++ +TG+ G V+ +VVA SR
Sbjct: 368 NGYLYFCEPS-SGLLTSINAKTGAKAWSVQVAGITGVDNDYCRGGPSVDPDSGLVVAGSR 426
Query: 102 SNGEL----------VWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPAD---QCC 148
+G L W+ +++ +Q+T ++Y G YVG++S EE +D +CC
Sbjct: 427 MSGRLFAVRMSDGGKAWTLEVESHVTAQMTQPATIYAGTAYVGVASSEEKAASDPSYECC 486
Query: 149 TFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYSGAAVWGSSPAIDVIRRQ---KQNNQT 205
+FRGS+ + V +G ++W+TY LP GY GA VWG +P+ID+ R Q N
Sbjct: 487 SFRGSIVAVRVADGTLLWKTYTLP------AGYVGAGVWGPAPSIDIQRGQVYVATGNLY 540
Query: 206 TKP----------THPDQ--CISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVP 253
P H DQ C+ + +A S++ALD+ +G W++ + D + C V
Sbjct: 541 LNPLCHARMDALGAHFDQDPCLPVEAHAGSVLALDMITGNPLWSRRISSNDAWNTACGVS 600
Query: 254 N--------NPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGD 305
+ +CP L++DF + PM++ + + RDV++ QKSG W + D+G
Sbjct: 601 TPILTMPALSFNCPTDSGLESDFAQGPMIVELE---KGRDVLLVGQKSGV-WKINPDNGY 656
Query: 306 IIWFKLAGPGGREGGGVWGAATDGRRVYTNIVNNDRIIWSTADPSNE------------- 352
++ + GPGG GG W A +G + + N+ + + +PS
Sbjct: 657 VMQASVLGPGGVAGGIQWSGANNGTHAFFPVTNSASVSQTLKNPSVPGVVATTGSTYTAV 716
Query: 353 -----------------TAHGPVTVVNGVLFAGSVS----ANGSTVYGGVPASYG 386
A+ P+TV N VLFA +V+ ANGS+ + S G
Sbjct: 717 NIKSGDIVWQYPLESWLYAYQPLTVANDVLFATAVTRMSPANGSSSIKALHTSTG 771
>gi|336260592|ref|XP_003345090.1| hypothetical protein SMAC_09311 [Sordaria macrospora k-hell]
gi|380092663|emb|CCC09940.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 557
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 130/431 (30%), Positives = 202/431 (46%), Gaps = 54/431 (12%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYA-GKDISATPAVANGVVYFPSWNGY 59
W+ GG N R+A I +R++ G I+ATP+VA G+ YFP+WNG
Sbjct: 42 WIGWGGSNYNNRWASTNSKIFSSNIRSVSEHCHVPGYGGGITATPSVAEGIAYFPAWNGS 101
Query: 60 LYAVNAFNGALIWEQNLSKLT----------------GLSGT--------GIVVNVTV-- 93
L A + + + W+ N++++ +S T I+ T+
Sbjct: 102 LVAFDYTSCKVKWDINVTQVILDYAPVDPLQAAVAPYPVSRTTPQLDLENNIIYFATLWN 161
Query: 94 AVVVAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEA---LPADQ--CC 148
A++VA G+++ +I+ P +Q+T S ++ Y G SS EE+ LP CC
Sbjct: 162 ALLVAADLRTGKILAKHRINAHPLAQVTQSPTLLGDIVYSGASSAEESVGFLPGVNYTCC 221
Query: 149 TFRGSLAKL----DVRNGRIIWQTYMLP--DNGGKRGGYSGAAVWGSSPAIDVIRRQ--- 199
TF G+ + R +W M+P D+ + G +SG+A+WGS P+ID RR
Sbjct: 222 TFIGNAIAVRFNRKARKFTTLWDVPMMPPNDDPSEPGFWSGSAIWGSQPSIDPKRRTIFY 281
Query: 200 KQNNQ----------TTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFT 249
N T P HP + S ++ ++VALD+++G + W + LG D +
Sbjct: 282 ATGNLYSVPDPWLACTADPAHPTCELPSRVWQEAVVALDLETGNVKWVRRLGVLDAWSVA 341
Query: 250 CL--VPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
CL + CP P DADFG AP + + +DVVV QK+G ++ D+GD+
Sbjct: 342 CLNATFDAGLCPQTPGPDADFGMAPAFVP-GKGKKGKDVVVVGQKNGNLYSLAADTGDLE 400
Query: 308 WFKLAGPGGREGGGVWGAATDGRRVYTNIVNNDRIIWSTADPSNETAHGPVTVVNGVLFA 367
W GPGG+ GG WG A D RRVY VN++ W+ A ++ GP NG +
Sbjct: 401 WAVSTGPGGQGGGLTWGIAVDDRRVYYVTVNSEGETWTPAPQQPQSRSGPAKSTNGSAYG 460
Query: 368 GSVSANGSTVY 378
+ G ++
Sbjct: 461 AADLETGEILW 471
>gi|365898099|ref|ZP_09436075.1| conserved exported hypothetical protein [Bradyrhizobium sp. STM
3843]
gi|365421234|emb|CCE08617.1| conserved exported hypothetical protein [Bradyrhizobium sp. STM
3843]
Length = 635
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 111/368 (30%), Positives = 174/368 (47%), Gaps = 46/368 (12%)
Query: 1 WLNHGGDLNNRRYAYGEVL-INPVTVRNLRLRWSFYAGKDI--SATPAVANGVVYFPSWN 57
W G D+ R+ ++ + P V L+LRW+F D SA P V G ++ S
Sbjct: 133 WNGWGADIRQHRFQAADMAQLAPNDVPRLKLRWAFGFPNDTRASAQPTVWGGRIFVGSAG 192
Query: 58 GYLYAVNAFNGALIWEQNLSKLTGLSGTGIVVNVTVAV---------------VVAVSRS 102
G +YA++A G W + +G G+ +T+ A+
Sbjct: 193 GKVYALDAKTGCQRWMFD-------AGFGVRSAITIGEDDRGATAYFGDQRGEAYALDAE 245
Query: 103 NGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQ---CCTFRGSLAKLDV 159
G+L+W T+++P + IT + ++ G YV +SSLEE + AD CC+FRG +A LD
Sbjct: 246 TGKLIWKTRVEPHAGAVITGAPTLADGVLYVPVSSLEEVMAADPRYPCCSFRGLIAALDA 305
Query: 160 RNGRIIWQTYMLPDN--------GGKRGGYSGAAVWGSSPAIDVIRRQKQNNQTTKPTHP 211
R+G + W+ Y+ P G G SG A+W S+P++D ++ + P
Sbjct: 306 RSGEVRWRGYVAPSAQSVGSNSIGTPLFGPSGGAIW-SAPSVDGAHQRIYATTGDSYSEP 364
Query: 212 DQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEA 271
S ++ VA D+ SG++AW++ + D + C +CP D DFG +
Sbjct: 365 PSATS-----DAFVAFDLASGQLAWSRQMTEGDAYNVACNARFTNNCPKTKGPDFDFGSS 419
Query: 272 PMLLTISTNGRFRDVVVAVQKSGFAWAFDRD-SGDIIWFKLAGPGGREGGGVWGAATDGR 330
PML+ ++ R ++A QKSG A D D G I+W + G G GG WGAATDG
Sbjct: 420 PMLVDLADGKR---ALIAGQKSGMVHALDPDHDGAILWQRRIGRGSSLGGVQWGAATDGT 476
Query: 331 RVYTNIVN 338
+Y + +
Sbjct: 477 NIYVALSD 484
>gi|357501715|ref|XP_003621146.1| hypothetical protein MTR_7g009760 [Medicago truncatula]
gi|355496161|gb|AES77364.1| hypothetical protein MTR_7g009760 [Medicago truncatula]
Length = 326
Score = 151 bits (382), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 88/214 (41%), Positives = 115/214 (53%), Gaps = 47/214 (21%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAGKDISATPAVANGVVYFPSWNGYL 60
W+NHGGDL NRRYAY E INP TV NL L+W F AGKDI+ATP + NG +YFP WNG +
Sbjct: 27 WINHGGDLFNRRYAYNEHKINPETVSNLSLKWKFNAGKDITATPTIYNGTIYFPCWNGNI 86
Query: 61 YAVNAFNGALIWEQNLSKLTGLSGTGIV--VNVTV-------------------AVVVAV 99
YA+ +G+L+W+QNL +LTGL+ TGI+ VN +V AVV+ +
Sbjct: 87 YAIKQIDGSLVWKQNLEELTGLNATGIIKAVNWSVARATPTVAEDLLIVGIYGPAVVIGL 146
Query: 100 SRSNGELVWSTQIDPRPRSQITMSGSVYMGA---------------------FYVGLSSL 138
R GEL+W T +D P ITMSG+ Y G Y +++
Sbjct: 147 ERRTGELIWLTHLDNHPAGVITMSGTYYNGLEAGPSGAAGGGIFGASTDEKRVYTNIANS 206
Query: 139 E----EALPADQCCTFRGSLAKLDVRNGRIIWQT 168
+ + LP + T G +D NG IIW T
Sbjct: 207 DAKNFKLLPTNMNTT-SGGWVGMDAMNGEIIWTT 239
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/135 (40%), Positives = 70/135 (51%), Gaps = 47/135 (34%)
Query: 326 ATDGRRVYTNIVNND--------------------------RIIWSTADPSNETAHGPVT 359
+TD +RVYTNI N+D IIW+TA+PSN +A+GPV+
Sbjct: 193 STDEKRVYTNIANSDAKNFKLLPTNMNTTSGGWVGMDAMNGEIIWTTANPSNNSANGPVS 252
Query: 360 VVNGVLFAGSVS-------------------ANGSTVYGGVPASYGCIYLGNGYTVSLGK 400
V N V+FAGS+ G+ VYGG+ S GCIY+G+GY VSLG
Sbjct: 253 VANEVVFAGSMDRLGHIYALNAKNGKIVWSYETGANVYGGMSISDGCIYVGHGYNVSLG- 311
Query: 401 FHPTWTPGTSLYAFC 415
+P GTSL+AFC
Sbjct: 312 -YPRRIGGTSLFAFC 325
>gi|410643907|ref|ZP_11354396.1| hypothetical protein GCHA_4666 [Glaciecola chathamensis S18K6]
gi|410136533|dbj|GAC12583.1| hypothetical protein GCHA_4666 [Glaciecola chathamensis S18K6]
Length = 614
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 109/356 (30%), Positives = 175/356 (49%), Gaps = 32/356 (8%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFY--AGKDISATPAVANGVVYFPSWNG 58
W GG N RY + + P V +L+L+W+F + A P ++ +VY S G
Sbjct: 131 WNGWGGKTGNTRYQDNDSGLTPDNVADLKLKWAFAFPEATRVRAQPIISQDMVYVGSQAG 190
Query: 59 YLYAVNAFNGALIWEQNLSKLTGLSGTGIVVNVTVAV------VVAVSRSNGELVWSTQI 112
+YA+NA G + WE +T + G + T+ A+ +GEL W T++
Sbjct: 191 IIYALNAETGCVQWE--YVAVTEVRGALFLQQDTLLFGDLEGNAYALDAQSGELKWRTKV 248
Query: 113 DPRPRSQITMSGSVYMGAFYVGLSSLE--EALPAD-QCCTFRGSLAKLDVRNGRIIWQTY 169
P P + IT S YV +SSLE A AD +CC+FRG++ +D+++G+ +W T+
Sbjct: 249 HPNPLAVITGSVIADEKKVYVPVSSLEIIPAARADYECCSFRGAVVAIDIQSGKKVWSTF 308
Query: 170 ML--------PDNGGKRGGYSGAAVWGSSPAIDVIRRQKQNNQTTKPTHPDQCISSDIYA 221
G ++ G SGA VW S P +D+ R N T + + +
Sbjct: 309 TTDVPKPTYKTSAGTQQHGPSGAPVW-SGPTLDIKR-----NLLYATTGQNYSTPATGTS 362
Query: 222 NSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTISTNG 281
++++AL++DSG I W + D + C N P+CP D D G + ML S+
Sbjct: 363 DAVLALNLDSGEIEWITQVTKGDAWNGAC-SRNTPNCPKEDGPDYDIGASAML---SSPV 418
Query: 282 RFRDVVVAVQKSGFAWAFDRDS-GDIIWFKLAGPGGREGGGVWGAATDGRRVYTNI 336
+ +++++ QKSG +A D D+ G ++W + G GG GG WG +TD + VY +
Sbjct: 419 KGKELLIIGQKSGMVYALDPDAKGKVVWKQRVGSGGTMGGVHWGMSTDNQNVYVGV 474
>gi|385271624|gb|AFI57011.1| PQQ-dependent dehydrogenase [Amycolatopsis orientalis]
Length = 533
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 132/440 (30%), Positives = 197/440 (44%), Gaps = 70/440 (15%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSF---YAGKDISATPAVANGVVYFPSWN 57
W D R+A E IN TV +L ++W+ G + + PAV G +YF +
Sbjct: 42 WPTWTKDARGSRHAADERRINQFTVDDLSVKWAHAFPRTGTTLRSQPAVVGGRMYFGGPD 101
Query: 58 GYLYAVNAFNGALIWEQNLSKLTGLSGTGIVVNVTVAV-------------VVAVSRSNG 104
G YA+++ GA W +L + G VV + +V + A+++ G
Sbjct: 102 GLFYALDSKTGATRWTFDLKTVDPEVGAAKVVRDSPSVANGRVYFGDGRGYLYALNQETG 161
Query: 105 ELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQ-CCTFRGSLAKLDVRNGR 163
L WS ++D P +++T S + G YVG+SS + A D CCTFRG + LD R G+
Sbjct: 162 ALEWSNRLDTNPAARLTSSPIHFDGRVYVGVSSADNAGGVDSACCTFRGHVDALDARTGQ 221
Query: 164 IIWQTYMLPD--------NGGKRGGYSGAAVWGSSPAIDVIRRQKQNNQTTKPTHPDQCI 215
++W+ Y +P+ +G SGA VW SSP ID R T
Sbjct: 222 LVWRYYTVPEPKAIGTWPSGAIHWSPSGAGVW-SSPVIDPATRTLYVGTGQNYT------ 274
Query: 216 SSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPD--CP---PGPNLDADFGE 270
++ ++S++ALD+ +G + W K L D + C P P CP G LD D G
Sbjct: 275 GTEGNSDSVLALDVGTGAVRWTKQLTHPDTWRVLCADPKVPPGYCPGLEEGSALDFDIGT 334
Query: 271 APMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDIIWFKLAGPGG---REGGGVWGAAT 327
AP + T+ GR R V QKSG D ++G+I+W + G E G WGA+
Sbjct: 335 APNVFTV--KGRTR--VGVGQKSGVYHVLDAETGEIVWQRQLSSGDTTYSESGIQWGASY 390
Query: 328 DGRRVY--TNIVN----------NDRIIWSTADPSNETAHGPVTVVNGVLFAGSVSANGS 375
DG R+Y TN N ++W T +P+ +G + G+ A S
Sbjct: 391 DGERLYVATNQANPGALHALDPETGALLWKTPNPA-----------DGCSWGGAALAPAS 439
Query: 376 TVYGGVPA---SYGCIYLGN 392
+ PA S G +Y G+
Sbjct: 440 CLLAHAPAVSSSPGVVYEGS 459
>gi|147854282|emb|CAN79118.1| hypothetical protein VITISV_005773 [Vitis vinifera]
Length = 1368
Score = 148 bits (373), Expect = 5e-33, Method: Composition-based stats.
Identities = 68/135 (50%), Positives = 90/135 (66%), Gaps = 21/135 (15%)
Query: 182 SGAAVWGSSPAIDVIR--------------------RQKQNNQTTKPTHPDQCISSDIYA 221
+GAA+WGSSP+IDV R +++QNNQT PT PDQCI D ++
Sbjct: 1201 AGAAIWGSSPSIDVRRNLVYVATGNLYSAPLSIRECQEQQNNQTV-PTQPDQCIEPDNHS 1259
Query: 222 NSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTISTNG 281
NSI+A+D+DS +I W + LGGYD ++ C + P+CPPGPN DADFGEAPM+L+I NG
Sbjct: 1260 NSILAIDLDSDKIKWYRQLGGYDAWFLACNNLSTPNCPPGPNPDADFGEAPMMLSIYVNG 1319
Query: 282 RFRDVVVAVQKSGFA 296
RD+V+AVQK+ A
Sbjct: 1320 TMRDIVIAVQKTAVA 1334
>gi|388520481|gb|AFK48302.1| unknown [Lotus japonicus]
Length = 224
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 78/168 (46%), Positives = 102/168 (60%), Gaps = 26/168 (15%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAGKDISATPAVANGVVYFPSWNGYL 60
WLNHGGDL NRRYA E I+P + NLRL+W FYAG++I+ATPA+ G +YFPSWNG +
Sbjct: 41 WLNHGGDLFNRRYASKENKISPKSAPNLRLKWKFYAGREITATPAIFKGTIYFPSWNGNI 100
Query: 61 YAVNAFNGALIWEQNLSKLTGLSGTGIVVNVTV-----------------------AVVV 97
YAV A +G+L+WEQ++ LTG+ G V NVT AVV+
Sbjct: 101 YAVKACDGSLVWEQSIQNLTGIKSPGSVTNVTFARATPTLAGDDHHDLLVVGIYGPAVVI 160
Query: 98 AVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAF---YVGLSSLEEAL 142
A++R +G+LVW TQ+D ITMSG+ Y G Y GL + +L
Sbjct: 161 ALNRIDGKLVWMTQLDSHNTGVITMSGTYYKGLVHFNYFGLLHIATSL 208
>gi|433606048|ref|YP_007038417.1| hypothetical protein BN6_42600 [Saccharothrix espanaensis DSM
44229]
gi|407883901|emb|CCH31544.1| hypothetical protein BN6_42600 [Saccharothrix espanaensis DSM
44229]
Length = 530
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 126/432 (29%), Positives = 188/432 (43%), Gaps = 74/432 (17%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAGKD---ISATPAVANGVVYFPSWN 57
W D R+ E I P V+NL+L+W+F K + + PA+ +GV YF +
Sbjct: 35 WATWQKDAAGSRHNAAEWRITPHNVKNLKLKWAFAYQKSESPVRSQPAIVDGVAYFGGPD 94
Query: 58 GYLYAVNAFNGALIWEQNLSKLT------------GLSGTGIVVNVTVAVVVAVSRSNGE 105
G YA +A GA W +LS + ++ + + ++ + G
Sbjct: 95 GKFYARDARTGAQRWTTDLSGIAPGPRAAVPWDGPAVADGRVYFGDVRGYLYSLDQRTGR 154
Query: 106 LVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALP------ADQCCTFRGSLAKLDV 159
+VW+ Q+D P + +T S V+ G YVG SS E A P A CCTFRG + LD
Sbjct: 155 VVWAKQVDAHPAATVTSSPIVHDGKVYVGTSSGENADPDPDHSRAYPCCTFRGHVDALDA 214
Query: 160 RNGRIIWQTYMLPD--------NGGKRGGYSGAAVWGSSPAIDVIRRQKQNNQTTKPTHP 211
R G ++W+ Y +P+ +G R SGA VW SSP ID + T
Sbjct: 215 RTGELVWRHYTVPEPKPVGTWPSGATRYEPSGAGVW-SSPTID-----PRTGTLYVGTGQ 268
Query: 212 DQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNN----PDCPPGPNLDAD 267
+ S+ + ++++ALD+ SG + W + D + C P+ P G LD D
Sbjct: 269 NYTGSAGDF-DTLLALDVRSGAVKWRNQVTKADTWRGLCNDPSPQGWCPGLADGSALDYD 327
Query: 268 FGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDIIWFKLAG---PGGREGGGVWG 324
G P L T+ NG R +V QK G FD +G+++W + G P G G WG
Sbjct: 328 IGATPNLFTV--NG--RTLVGVGQKVGVYHVFDATTGEVVWRRQLGVPLPSGGISGIQWG 383
Query: 325 AATDGRRVYTNIV------------NNDRIIWSTADPSN--------------ETAHGP- 357
+ DGRR+Y ++W T P++ AHGP
Sbjct: 384 TSFDGRRLYIATYFAGPGTLFAVDPGTGAVLWETPHPADGCTTGGAADHPDVCTLAHGPA 443
Query: 358 VTVVNGVLFAGS 369
V+ GV++ GS
Sbjct: 444 VSSSPGVVYEGS 455
>gi|399060291|ref|ZP_10745502.1| WD40-like repeat containing protein [Novosphingobium sp. AP12]
gi|398037943|gb|EJL31118.1| WD40-like repeat containing protein [Novosphingobium sp. AP12]
Length = 630
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 110/336 (32%), Positives = 157/336 (46%), Gaps = 31/336 (9%)
Query: 25 VRNLRLRWSF--YAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIW------EQNL 76
V L+L+W+F + PA+ G ++ S G +YA++ G + W E
Sbjct: 169 VGRLKLKWAFGFPLANRARSQPALGGGAIFVGSHGGTVYALDRETGCVRWSYAAASEVRT 228
Query: 77 SKLTGLSGTGIVVNVTVAV-------VVAVSRSNGELVWSTQIDPRPRSQITMSGSVYMG 129
+ + G V +A AV G+LVW + D P + IT S +++
Sbjct: 229 AIVLSPWQAGDAQAVPLAFFGDWSGNAYAVEAFTGKLVWKLRADEHPAAVITASPALHGD 288
Query: 130 AFYVGLSSLEEALPADQ---CCTFRGSLAKLDVRNGRIIWQTYML----PDNGGKRGGYS 182
YV +SSLEEA A+ CC+FRGS+ LD R GR W+T+++ P GK G S
Sbjct: 289 TLYVPVSSLEEASAANPGYVCCSFRGSILALDPRTGREKWRTWLVDEPKPSKDGKTLGPS 348
Query: 183 GAAVWGSSPAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGG 242
G VW + A+D R T P +S ++IVALD+ +G I W
Sbjct: 349 GVPVW-AGIAVDEKRGNLIVATGDNYTRPATELS-----DAIVALDLGTGAIRWHFQATE 402
Query: 243 YDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRD 302
D + C+ P+ +CP D DFG P+L + RD V+A QKSG AWA D
Sbjct: 403 GDAWNVDCVTPDPDNCPEDAGPDYDFGAIPVL---AKGKDGRDYVLAGQKSGIAWAVDAA 459
Query: 303 SGDIIWFKLAGPGGREGGGVWGAATDGRRVYTNIVN 338
+G + W + G GG GG +G A D RVY I +
Sbjct: 460 TGKLAWHRQVGRGGMAGGIHFGIAADSGRVYVAISD 495
>gi|336265251|ref|XP_003347398.1| hypothetical protein SMAC_08673 [Sordaria macrospora k-hell]
gi|380087475|emb|CCC14215.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 545
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 107/382 (28%), Positives = 174/382 (45%), Gaps = 54/382 (14%)
Query: 1 WLNHGGD-LNNRRYAYGEVLINPVTVRNLRLRWSFYAGKDISATPAVANGVVYFPSWNGY 59
W GG+ LNNR + I+ + L+ ++ G +SATP + +VY+P+W+G
Sbjct: 34 WTGWGGNCLNNRWQPESALTISNIDTLTLKCSKTYPFG--VSATPVIEGNIVYYPTWDGE 91
Query: 60 LYAVNAFNGALIWEQNLSKL-------------------TGLSGTGIVVNV---TVAVVV 97
+ A++ + W N+++L T G +++ A+VV
Sbjct: 92 MVALDYTTCQVKWSFNVTQLIVDYAPPNSYQVLAYPVSRTSPQIDGNIIHFGTQRFALVV 151
Query: 98 AVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEA----LPADQCCTFRGS 153
A+ + G ++ + Q++P P + IT S + + G +VG S EE P +CCTF G+
Sbjct: 152 AMDKRTGAVLDTYQVNPHPLAVITQSPTFHNGILFVGTGSYEEPAPLRFPGYKCCTFIGN 211
Query: 154 LAKL----DVRNGRIIWQTYMLPDNGGKRGGYSGAAVWGSSPAIDVIRRQ---KQNNQTT 206
L R R+ W LP +SGA VWGS P+ID R Q N +
Sbjct: 212 FVALTFSRQTRKFRLKWDLPTLPSGTA----WSGAGVWGSQPSIDEKRNQVFFGTGNVYS 267
Query: 207 KPTH-------PDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVP--NNPD 257
P +C+ + +I+A++I SG+ W + + D + C+ + +
Sbjct: 268 FPQEFAHCANETSECMPRGVNQEAIIAVNIASGKENWVRRITKMDAWNGACVATPIDKEN 327
Query: 258 C---PPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDIIWFKLAGP 314
C PPG D DFG AP ++ T+G D+VV QK+ +A + G+++W P
Sbjct: 328 CAQDPPG--TDGDFGMAPGFVSAKTSGLKEDIVVVGQKNANLYALSAEKGEMVWQVNTSP 385
Query: 315 GGREGGGVWGAATDGRRVYTNI 336
+ GG WG A D VY N+
Sbjct: 386 DLQGGGISWGLAVDDEAVYYNL 407
>gi|433605377|ref|YP_007037746.1| hypothetical protein BN6_35770 [Saccharothrix espanaensis DSM
44229]
gi|407883230|emb|CCH30873.1| hypothetical protein BN6_35770 [Saccharothrix espanaensis DSM
44229]
Length = 524
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 126/431 (29%), Positives = 186/431 (43%), Gaps = 71/431 (16%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAGKD---ISATPAVANGVVYFPSWN 57
W GD + R+A E I P + L L+W+F K+ + PAV NG +YF S +
Sbjct: 37 WPGWTGDKSGSRFAAAERRIGPWSAGKLELKWAFAYPKNGFPAKSQPAVVNGGIYFGSPD 96
Query: 58 GYLYAVNAFNGALIWEQNLSKLTGLSGTGIVVNVTVAV-----------VVAVSRSNGEL 106
G +A++A GA W +LS + +G+ ++ TVA + A+ + G L
Sbjct: 97 GKFHALDAKTGANRWTFDLSTVG--AGSVVIDGPTVARGKVYFGDNGGRLYALDQRTGRL 154
Query: 107 VWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQ--CCTFRGSLAKLDVRNGRI 164
WS +P T S + G YVG SS E P CCTFRG + +D G +
Sbjct: 155 AWSKDTEPHVAGMHTSSPLYHDGRIYVGASSGENINPDRNYPCCTFRGHVDSIDAETGDL 214
Query: 165 IWQTYMLPD--------NGGKRGGYSGAAVWGSSPAIDVIRRQKQNNQTTKPTHPDQCIS 216
+W+ + P+ +G R SGA VW SSP +D ++ N + +
Sbjct: 215 VWRYFTTPEPQAVGTWPSGATRYEPSGAGVW-SSPVVD----ERTNTLYVGTGNLYSGTT 269
Query: 217 SDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPN----LDADFGEAP 272
D ++++ALD +G W + + D + C +P+N PG LD D G P
Sbjct: 270 GDF--DTLLALDARTGAAKWKQKVTQADTWRLLCGLPDNEGYCPGQKDGTALDYDIGATP 327
Query: 273 MLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDIIWFKLAG---PGGREGGGVWGAATDG 329
L R V QKSG FD +G + W + PGG G WG++ DG
Sbjct: 328 TLFRHGG----RTFVGVGQKSGVFHVFDARNGSVQWRRQLSKPMPGGGLSGIQWGSSFDG 383
Query: 330 RRVY--TNIVN----------NDRIIWSTADPSN--------------ETAHGP-VTVVN 362
+R+Y TN N N I+W T +P N + +H P VT
Sbjct: 384 KRLYMATNWGNPGTVFALDPGNGDIVWQTPNPENGCTTGGAAQFPQVCQRSHTPAVTTSP 443
Query: 363 GVLFAGSVSAN 373
G+++ GSV
Sbjct: 444 GLVYEGSVDGK 454
>gi|254283791|ref|ZP_04958759.1| pyrrolo-quinoline quinone [gamma proteobacterium NOR51-B]
gi|219679994|gb|EED36343.1| pyrrolo-quinoline quinone [gamma proteobacterium NOR51-B]
Length = 625
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 104/352 (29%), Positives = 173/352 (49%), Gaps = 40/352 (11%)
Query: 9 NNRRYAYGEVLINPVTVRNLRLRWSFYAGKDISA--TPAVANGVVYFPSWNGYLYAVNAF 66
N R ++ IN V L L W+ A PAVA+G ++F + N + AV+
Sbjct: 135 NERAFSASTTSINADNVAQLELAWAIRVPDAFRARSQPAVAHGNLFFGTQNNGVVAVDEK 194
Query: 67 NGALIWE-QNLSKLTGLSGTGIVVNVTVAV-----------VVAVSRSNGELVWSTQIDP 114
G + WE ++++ T IV + + A+ +G+LVW Q +
Sbjct: 195 TGCVRWEFDTVAEVR----TAIVADPDPETPYLYFGDIGGNIYAIDALSGKLVWRDQPNA 250
Query: 115 RPRSQITMSGSVYMGAFYVGLSSLEEALPAD---QCCTFRGSLAKLDVRNGRIIWQTYML 171
P + +T + +++ G YV +SS+E AD +CC FRG + + G +WQT+ +
Sbjct: 251 HPLTLVTAAPALHDGKLYVSVSSIEVGAAADPSYECCDFRGGVTAYEASTGTRLWQTHTI 310
Query: 172 PDN--------GGKR-GGYSGAAVWGSSPAIDVIRRQKQNNQTTKPTHPDQCISSDIYAN 222
P+ GKR SGA +W ++P+ID R N+ T + ++ +++
Sbjct: 311 PEEPQPVGDVIAGKRILAPSGAPIW-NTPSIDAKR-----NRLYVGTGENYSSPAEGHSD 364
Query: 223 SIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTISTNGR 282
+I+A+D+ +G +AW + + D + +C + + +CP D DFG A ++ T S
Sbjct: 365 AIIAMDLTTGEVAWVQQMTEKDAWNVSCELEIDVNCPEEDGPDYDFGAATIVHTRSDG-- 422
Query: 283 FRDVVVAVQKSGFAWAFDRDS-GDIIWFKLAGPGGREGGGVWGAATDGRRVY 333
+DVV+A QKSG +A D D+ GDI+W G GG +GG +G A D +Y
Sbjct: 423 -KDVVLAGQKSGQVYALDPDNGGDILWENKLGRGGIQGGVHFGMAVDNDALY 473
>gi|119504573|ref|ZP_01626652.1| putative PQQ-dependent polyvinyl alcohol dehydrogenase precursor
[marine gamma proteobacterium HTCC2080]
gi|119459595|gb|EAW40691.1| putative PQQ-dependent polyvinyl alcohol dehydrogenase precursor
[marine gamma proteobacterium HTCC2080]
Length = 659
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 107/352 (30%), Positives = 168/352 (47%), Gaps = 42/352 (11%)
Query: 20 INPVTVRNLRLRWSF-YAGK-DISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLS 77
+N + LRL+WSF YAG + P +A G +Y S +G +YA++ G + W + S
Sbjct: 177 LNKADLPKLRLKWSFGYAGAFRARSQPTIAMGAIYTGSQDGTVYALDLETGCVRWSFSAS 236
Query: 78 KLTGLSGTGIVVNV------------TVAVVVAVSRSNGELVWSTQIDPRPRSQITMSGS 125
TG+V+ +A + AV GELVW D P + +T + +
Sbjct: 237 AEVR---TGVVLGQHGSTRPLAFFGDIIANLYAVDALTGELVWKISADDHPSATLTGTPA 293
Query: 126 VYMGAFYVGLSSLEEALPADQ---CCTFRGSLAKLDVRNGRIIWQTYMLPDNGGKRG--- 179
+ G Y +SSLE AD CCTFRG + +D +G W++Y +PD K+G
Sbjct: 294 YHEGVLYAPVSSLEVTAAADPNYPCCTFRGKVMAIDASSGASQWESYTVPDPASKQGVTS 353
Query: 180 ------GYSGAAVWGSSPAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGR 233
SGA VW +SP +D NN+ + + +D +++I A+ +D+G
Sbjct: 354 VGTAILAPSGAPVW-NSPTLD-----PDNNRLFFGSGENYSSPADGNSDAIFAVRMDTGE 407
Query: 234 IAWAKPLGGYDIFYFTCLVP-NNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQK 292
W + + D + C++ N+P+CPP D D G +P+L+ + D +VA K
Sbjct: 408 RLWTRQIFSGDAWNVACMMSVNHPNCPPELGPDYDLGSSPLLVEVPGA---EDFIVAGHK 464
Query: 293 SGFAWAFDRDSG-DIIWFKLAGPGGREGGGVWGAATDGRRVYT--NIVNNDR 341
G A+D +G + W G G +GG +G A +G RVY N +N+ R
Sbjct: 465 DGTVIAYDAATGANRQWVTKVGRGSIQGGVHFGMAAEGARVYAPINDMNDTR 516
>gi|392965701|ref|ZP_10331120.1| polyvinyl-alcohol dehydrogenase (acceptor) [Fibrisoma limi BUZ 3]
gi|387844765|emb|CCH53166.1| polyvinyl-alcohol dehydrogenase (acceptor) [Fibrisoma limi BUZ 3]
Length = 618
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 120/426 (28%), Positives = 185/426 (43%), Gaps = 70/426 (16%)
Query: 5 GGDLNNRRYAYGEVL-INPVTVRNLRLRWSFY--AGKDISATPAVANGVVYFPSWNGYLY 61
GG+L + E I+ TV L+L+W+F + + PA+ + + G +Y
Sbjct: 136 GGNLEGTGFRSAEQAGISAATVGKLKLKWAFAIPEANQVRSKPAIVGDWLILGTQFGDVY 195
Query: 62 AVNAFNGALIWEQNLSKLTGLSGTGIVVNVTVAV----------VVAVSRSNGELVWSTQ 111
+N G + W+ + + G VV + V A+ G+L+W +
Sbjct: 196 CLNKTTGKIGWQ--FAAKAAIRGAISVVEQGNTLHTYFADNSTNVYALDVRTGKLLWENK 253
Query: 112 IDPRPRSQITMSGSVYMGAFYVGLSSLEEAL---PADQCCTFRGSLAKLDVRNGRIIWQT 168
P+S +T S +VY YV ++S+E A PA CC+ G + LD + G+I+W+
Sbjct: 254 SGQHPQSGVTGSVAVYNNRVYVPITSIEVASVLDPAYPCCSSSGEIVVLDAQTGKIVWRH 313
Query: 169 YMLPDNG---GKRG------GYSGAAVWGSSPAIDVIRRQKQNNQTTKPTHPDQCISSDI 219
++ + GKR G SGA VW SSP ID R T P SSD
Sbjct: 314 RVIQEEAREVGKRKDGKPFYGPSGAIVW-SSPTIDTKRGLLYYGTGENYTAP-ATTSSD- 370
Query: 220 YANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTIST 279
+I ALD+ +G++ W+ D + +C P +P+CP D DFG AP+L+
Sbjct: 371 ---AIQALDLKTGKLVWSFQATKDDTWNMSC--PYSPNCPEKAGPDHDFGMAPILVKQPD 425
Query: 280 NGRFRDVVVAVQKSGFAWAFDRDSGDIIWFKLAGPGGREGGGVWGAATDGRRVYTNIVNN 339
+++ QKSGF + D+G +IW G G GG WG ATDG+RVY +N
Sbjct: 426 G---SEMLAVGQKSGFVYGLSPDNGTLIWKTRIGKGSALGGIHWGMATDGKRVYAANADN 482
Query: 340 D-------------------------RIIWSTADPSNETAHGPV-------TVVNGVLFA 367
+++W A P E G + V+ GV+FA
Sbjct: 483 KYAMDPKVDSLIKPSPGLYALEASTGKVVWKAAAPDCEGKAGCIEANSAAPVVMPGVVFA 542
Query: 368 GSVSAN 373
G + +
Sbjct: 543 GGLDGH 548
>gi|388515253|gb|AFK45688.1| unknown [Lotus japonicus]
Length = 189
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 91/188 (48%), Positives = 105/188 (55%), Gaps = 45/188 (23%)
Query: 273 MLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDIIWFKLAGPGGREGGGVWGAATDGRRV 332
M+LTI N DVVVAVQKSGFAWA RD G ++W GPGG GGG WGAATD +RV
Sbjct: 1 MMLTIKANESKHDVVVAVQKSGFAWALHRDDGKLMWSTEVGPGGIAGGGTWGAATDKKRV 60
Query: 333 YTNIVN--------------------------NDRIIWSTADPSNETAHGPVTVVNGVLF 366
YTNI N + +I+WS A+PSN T++GPV+V NGV+F
Sbjct: 61 YTNIANSGGKNFTLKPSNKITNSGGWVAMEARSGKILWSVANPSNATSNGPVSVANGVVF 120
Query: 367 AGSVS-------------------ANGSTVYGGVPASYGCIYLGNGYTVSLGKFHPTWTP 407
GS + GSTVYGG+ S GCIY GNGYTV LG P T
Sbjct: 121 VGSANRKGSVYAINSKTGKILWTYETGSTVYGGMSISDGCIYFGNGYTVGLGTLIPNLTG 180
Query: 408 GTSLYAFC 415
GTSLYAFC
Sbjct: 181 GTSLYAFC 188
>gi|407641440|ref|YP_006805199.1| polyvinyl-alcohol dehydrogenase [Nocardia brasiliensis ATCC 700358]
gi|407304324|gb|AFT98224.1| polyvinyl-alcohol dehydrogenase [Nocardia brasiliensis ATCC 700358]
Length = 539
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 127/390 (32%), Positives = 170/390 (43%), Gaps = 56/390 (14%)
Query: 7 DLNNRRYAYGEVLINPVTVRNLRLRWSFYAGKDISAT--PAVANGVVYFPSWNGYLYAVN 64
DL RY E + P TV L+L+W+F I+A+ PAV +G VY NG YA++
Sbjct: 53 DLAGSRYNPHETALTPATVGALKLKWAFAFPDTIAASSQPAVVDGTVYVGGRNGTFYALD 112
Query: 65 AFNGALIWE-QNLSKL------TGLSGTGIVVNVTV------AVVVAVSRSNGELVWSTQ 111
A GA W Q + L GL V++ V A + A+ +G L W Q
Sbjct: 113 ANTGATRWSFQAETPLGGNLPTYGLRNGPAVMDGMVFFGDNSARMWALDAQSGALRWVRQ 172
Query: 112 IDPRPRSQITMSGSVYMGAFYVGLSSLE---EALPADQCCTFRGSLAKLDVRNGRIIWQT 168
+D + IT S + G YVG+SS E L CCTFRGS+A LD G I WQ
Sbjct: 173 LDAHRLAIITGSPLAFDGHIYVGVSSQELGSATLDHYPCCTFRGSVAALDAATGDIRWQH 232
Query: 169 YMLP-----DNGGKRGGYSGAAVWGSSPAIDVIRRQKQNNQTTKPTHPDQCISSDIYANS 223
Y +P +G SGA VW SSP I ++T T + A +
Sbjct: 233 YTIPPPEPTPSGSPPFAPSGAPVW-SSPTI------HPESRTLYYTAGNPYTGYPEGAEA 285
Query: 224 IVALDIDSGRIAWAKPLGGYDIFYF-TCLVPNNPDCPPGPNLDADFGEAPMLLTISTNGR 282
I ALD+D+G W + + D + C P P P D DFG P + I
Sbjct: 286 IGALDLDTGTTRWVRRMTPGDAPWNGRCTYPPPGGNCPDPGHDFDFGSQPNIFEIGD--- 342
Query: 283 FRDVVVAVQKSGFAWAFDRDSGDIIWFK--------LAGPGGREGGGV-WGAATDGRRVY 333
R VV A QKSG D +G+IIW L PG G+ WGA+ DG+R+Y
Sbjct: 343 -RLVVGAGQKSGVFHLLDAVTGEIIWQTRLNTPVPVLPIPGSESLQGIQWGASYDGQRLY 401
Query: 334 TNIVN------------NDRIIWSTADPSN 351
++WST +P++
Sbjct: 402 VATYQGTPGTLFALHPATGDVLWSTPNPAH 431
>gi|254282722|ref|ZP_04957690.1| putative PQQ-dependent polyvinyl alcohol dehydrogenase [gamma
proteobacterium NOR51-B]
gi|219678925|gb|EED35274.1| putative PQQ-dependent polyvinyl alcohol dehydrogenase [gamma
proteobacterium NOR51-B]
Length = 557
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 105/346 (30%), Positives = 158/346 (45%), Gaps = 40/346 (11%)
Query: 25 VRNLRLRWSF-YAGKDIS-ATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTGL 82
V +L L+W+F Y G + + P VAN V+ S G +YA++ G W
Sbjct: 91 VSDLELKWAFAYPGATRARSQPTVANQTVFVGSQPGAVYALDLMTGCARWTFTADAEVRS 150
Query: 83 SGTGIVVNVTVAV--------VVAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVG 134
+ T ++ A V + GE +W + + P IT S + G +V
Sbjct: 151 AITLVMEGDNAAAYFGDFEGNVYKLDAETGEQLWRSAVRDHPVGTITGSPRYFDGRLFVP 210
Query: 135 LSSLEEALPAD---QCCTFRGSLAKLDVRNGRIIWQTYMLPD------NGGKRG----GY 181
LSS E A AD CCTFRG++ LD G +W+T+++P+ KRG
Sbjct: 211 LSSSEWASAADPGYTCCTFRGNVISLDAETGEELWRTHVIPEAPSPTGKTNKRGLPILAP 270
Query: 182 SGAAVWGSSPAIDVIR---RQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAK 238
SGA VW +SP ID R T P H + ++S++A+D+D+G I W+
Sbjct: 271 SGAPVW-NSPTIDEERGLLYVGTGESYTSPAHGN--------SDSVIAIDLDTGNIVWSF 321
Query: 239 PLGGYDIFYFTCLVPNNPD-CPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAW 297
D + C +P D CP D D G +P+L RD+++ QKSG +
Sbjct: 322 QALAGDAWNMACNLPGMRDNCPEEDGPDLDIGASPVLW---KGPEGRDLILVGQKSGMVY 378
Query: 298 AFD-RDSGDIIWFKLAGPGGREGGGVWGAATDGRRVYTNIVNNDRI 342
A D + G+++W G GG GG WG A+DG R++ + + I
Sbjct: 379 AIDPENKGELVWKTRIGRGGFAGGVHWGMASDGERLFATNADTNFI 424
>gi|284037866|ref|YP_003387796.1| PQQ-dependent enzyme-like protein [Spirosoma linguale DSM 74]
gi|283817159|gb|ADB38997.1| PQQ-dependent enzyme-like protein [Spirosoma linguale DSM 74]
Length = 618
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 104/346 (30%), Positives = 157/346 (45%), Gaps = 33/346 (9%)
Query: 20 INPVTVRNLRLRWSFY--AGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIW----E 73
I P V +L+++W+F G I + PAV + S G +YA++ G + W +
Sbjct: 154 ITPQNVASLKVKWTFAFPDGTQIRSKPAVVGDWLIVGSQFGDVYAIHKQTGKIGWHFIGD 213
Query: 74 QNLSKLTGLSGTGIVVNVTVAV----VVAVSRSNGELVWSTQIDPRPRSQITMSGSVYMG 129
+ + +G + A V A+ ++G+L+W + P+S T S + Y
Sbjct: 214 APIRGAIFVEKSGDKLRAYFADFTTNVYAIDVASGKLIWKKRAGQHPQSGNTGSVTAYEN 273
Query: 130 AFYVGLSSLEEALPAD---QCCTFRGSLAKLDVRNGRIIWQTYMLPD----NGGKRGGYS 182
V L+S E D CCT G + L+ G ++W+ ++P +G K+ G S
Sbjct: 274 TLVVPLTSNEVTTSKDPNYTCCTSSGEVIALNATTGDLLWRHRVIPQEAQISGKKKNGQS 333
Query: 183 -----GAAVWGSSPAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWA 237
GA VW SSP ID R T P S ++I ALDI +G++ W+
Sbjct: 334 FYGPSGAPVW-SSPTIDTKRGLVYIGTGENYTDPPSTTS-----DAIQALDIKTGKLVWS 387
Query: 238 KPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAW 297
D + C P +P+CP D DFG AP+L+ RDV+V QKSG
Sbjct: 388 YQATKSDTWNLAC--PGDPNCPDKVGPDLDFGMAPLLVKTKAG---RDVLVVGQKSGVVH 442
Query: 298 AFDRDSGDIIWFKLAGPGGREGGGVWGAATDGRRVYTNIVNNDRII 343
+ ++G +IW G GG GG WG ATDG VY +N ++
Sbjct: 443 CLEPETGKVIWQTRIGKGGMLGGIHWGMATDGNYVYAANADNRLVL 488
>gi|148554244|ref|YP_001261826.1| pyrrolo-quinoline quinone [Sphingomonas wittichii RW1]
gi|148499434|gb|ABQ67688.1| Pyrrolo-quinoline quinone [Sphingomonas wittichii RW1]
Length = 639
Score = 127 bits (320), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 115/419 (27%), Positives = 181/419 (43%), Gaps = 70/419 (16%)
Query: 9 NNRRYAYGEVL-INPVTVRNLRLRWS--FYAGKDISATPAVANGVVYFPSWNGYLYAVNA 65
+NRR+ ++ + V L L+W+ F + P G ++ S +G +YA +
Sbjct: 161 DNRRFIPADMAKLAAADVPKLALKWAYAFPGALRARSQPGYGWGTMFVGSQDGTVYAFDL 220
Query: 66 FNGALIWEQNLSKLTGLSGTGIVVNVT---------VAVVVAVSRSNGELVWSTQIDPRP 116
+G W + +S T IV + + A+ G+++WS ++D P
Sbjct: 221 DSGCTKWTRRVSAEIR---TAIVADAATKRLYFGDLLGRAYALDAFTGKILWSEKLDDHP 277
Query: 117 RSQITMSGSVYMGAFYVGLSSLEEALPAD---QCCTFRGSLAKLDVRNGRIIWQTYMLPD 173
+ IT + ++ G YV +SSLE A PAD CC+FRGS+ LD G + W+ Y +P
Sbjct: 278 DATITGTPALGGGLLYVPVSSLEVAQPADPKYACCSFRGSVVALDPATGAVRWRAYTVPQ 337
Query: 174 NGGKRG---------GYSGAAVWGSSPAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSI 224
++G G SGA VW +SP D + + + P +D ++++
Sbjct: 338 PPTEQGRNPADAPILGPSGAPVW-NSPTYDAEQGRVYFGSGENYSSP-----ADDNSDAV 391
Query: 225 VALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTISTNGRFR 284
A+D +GR W L D + C++ + CP D D + +L+ I G R
Sbjct: 392 FAVDARTGRRLWHTQLTKGDAWNVACMLGSG-SCPKENGPDHDVAASTLLIPI---GGGR 447
Query: 285 DVVVAVQKSGFAWAFDRDSGDIIWFKLAGPGGREGGGVWGAATDGRRVYTNI-------- 336
++V QKSG AW D DSG I W + G GG +GG +G A DG RV+ I
Sbjct: 448 RMLVIGQKSGEAWGLDPDSGRIAWQRQLGHGGTQGGVHFGMAADGTRVFVPINDMPDTGD 507
Query: 337 -----------------VNNDRIIWSTADPSNETAH--------GPVTVVNGVLFAGSV 370
R+IW+ P + VT + GV+FAG +
Sbjct: 508 ARVYDASIRGSGLHAIDAATGRVIWNARAPEDCAGRKFCDTGISAAVTAIPGVVFAGHL 566
>gi|75427676|sp|P77931.1|PVADH_PSESP RecName: Full=Polyvinylalcohol dehydrogenase; Short=PVA
dehydrogenase; Short=PVADH; AltName: Full=Polyvinyl
alcohol dehydrogenase (cytochrome); Flags: Precursor
gi|1502279|dbj|BAA09321.1| PQQ-dependent polyvinyl alcohol dehydrogenase [Pseudomonas sp.]
gi|7649950|dbj|BAA94193.1| polyvinyl alcohol dehydrogenase [Pseudomonas sp.]
Length = 639
Score = 127 bits (320), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 99/364 (27%), Positives = 163/364 (44%), Gaps = 43/364 (11%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAGKDISATPAVANGVVYFPSWNGYL 60
W G + N R+ L V L+++W+F + V ++ S +G +
Sbjct: 147 WNGWGAGITNARFQPNPGL-TAADVPRLKVKWAFNYPGSKNGQATVVGDRLFVTSMSGAV 205
Query: 61 YAVNAFNGALIWEQNLSKLTGLS------------GTGIVVNVTVAVVVAVSRSNGELVW 108
YA+NA G + W + + T S I + VA+ G+ +W
Sbjct: 206 YALNAKTGCVYWRHDAAAATRSSVHVVQLPAGAPAQYAIFFSDWTKAAVALDAQTGKQLW 265
Query: 109 STQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPAD---QCCTFRGSLAKLDVRNGRII 165
T ID +P Q+T S + + G +V +SS EA + +CC FRG+L LD +G+++
Sbjct: 266 KTTIDDQPGVQMTGSPTYHEGKLFVPISSGNEAFATNDQWECCKFRGALVALDALSGKVL 325
Query: 166 WQTYM---------LPDNGGKRGGYSGAAVWGSSPAIDVIR---RQKQNNQTTKPTHPDQ 213
W+TY L G + G +G ++W S+P ID R +N T+ H
Sbjct: 326 WKTYTTQKEPAPFRLNKLGKQMWGPAGGSIW-SAPTIDPKRGLVYVATSNSYTEVHHEG- 383
Query: 214 CISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPM 273
+++++A++I++G++ W + D + C P +CP D G +P+
Sbjct: 384 -------SDAVMAMEIETGKVRWINQVTKDDNYIIGC--PRAANCPEKVGPDFALGNSPI 434
Query: 274 LLTISTNGRFRDVVVAVQKSGFAWAFDRDS-GDIIWFKLAGPGGREGGGVWGAATDGRRV 332
L T+ R +V QKSG +A D D+ G++IW + PG GG +G A D V
Sbjct: 435 LHTLQDG---RQYIVVGQKSGAVYAMDPDNDGELIWMRRVSPGSELGGVEFGMAADAENV 491
Query: 333 YTNI 336
Y I
Sbjct: 492 YVGI 495
>gi|119504529|ref|ZP_01626608.1| putative PQQ-dependent polyvinyl alcohol dehydrogenase precursor
[marine gamma proteobacterium HTCC2080]
gi|119459551|gb|EAW40647.1| putative PQQ-dependent polyvinyl alcohol dehydrogenase precursor
[marine gamma proteobacterium HTCC2080]
Length = 632
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 107/365 (29%), Positives = 161/365 (44%), Gaps = 37/365 (10%)
Query: 1 WLNHGGDLNNRRYAYGEVL-INPVTVRNLRLRWSF-YAGKDIS-ATPAVANGVVYFPSWN 57
W GG + N+R+ + + P TV L L+W+F Y G + + P V V+ S
Sbjct: 132 WSGWGGGIRNQRFQDADSAGLGPDTVGELELKWAFAYPGATRARSQPLVHGNTVFVGSQK 191
Query: 58 GYLYAVNAFNGALIWEQN----------LSKLTGLSGTGIVVNVTVAVVVAVSRSNGELV 107
G +YA++ +G W+ ++ L S + A V AVS G +
Sbjct: 192 GTVYALDLTSGCSHWQYEAGAEVRNGITVAMLENQSAPVLFFGDFKARVHAVSARTGAAL 251
Query: 108 WSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQ---CCTFRGSLAKLDVRNGRI 164
W + + IT S + YV +SS E A AD CCTFRGS+A LD +G +
Sbjct: 252 WQKSVGTHADATITGSVKYHEQRLYVPISSSEWATAADPGYPCCTFRGSVAALDANDGSL 311
Query: 165 IWQTYMLPD----------NGGKRGGYSGAAVWGSSPAIDVIRRQKQNNQTTKPTHPDQC 214
W ++++P G KR +GA VW +SP ID R T P
Sbjct: 312 FWNSFVIPTAPQETGETNPAGAKRMAPAGAPVW-NSPTIDAERGLLYVGTGEGYTSPAVT 370
Query: 215 ISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPML 274
+S +++VA+ ++ G I W++ L D + C + +CP D D G A
Sbjct: 371 MS-----DAVVAMRLEDGGIVWSQQLLAGDAWNMACFIGGGGNCPEENGPDLDIGAA--- 422
Query: 275 LTISTNGRFRDVVVAVQKSGFAWAFDRDS-GDIIWFKLAGPGGREGGGVWGAATDGRRVY 333
TI G RD++ QKSG +A D ++ G +W K G GG GG WG + ++
Sbjct: 423 -TILWRGDARDLLFVGQKSGDVYALDPNAGGQTVWHKKLGRGGYAGGVHWGMTANQDALF 481
Query: 334 TNIVN 338
I +
Sbjct: 482 VPIAD 486
>gi|254282551|ref|ZP_04957519.1| putative PQQ-dependent polyvinyl alcohol dehydrogenase [gamma
proteobacterium NOR51-B]
gi|219678754|gb|EED35103.1| putative PQQ-dependent polyvinyl alcohol dehydrogenase [gamma
proteobacterium NOR51-B]
Length = 623
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 108/389 (27%), Positives = 173/389 (44%), Gaps = 56/389 (14%)
Query: 5 GGDLNNRRYAYGEVL-INPVTVRNLRLRWSF-YAGK-DISATPAVANGVVYFPSWNGYLY 61
G DL+N R+ + V L ++W F Y G + P G VY S +G ++
Sbjct: 120 GVDLHNTRFQTAAAGGLTADNVDELEVKWVFAYPGAMQARSEPVFGGGAVYVGSQDGTVW 179
Query: 62 AVNAFNGALIWEQNLSKLTGLSGTGIVVNV----------------TVAVVVAVSRSNGE 105
A++A G + W+ + T TG+V+ T+A A+ GE
Sbjct: 180 ALDAETGCMRWKFSA---TAEVRTGVVITQWSADDDDVDPMIYFGDTIANTYALRAKTGE 236
Query: 106 LVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLE---EALPADQCCTFRGSLAKLDVRNG 162
LVW + D + T + +++ G ++ +SSLE A P +CC+FRG++ +D + G
Sbjct: 237 LVWKIKGDGHRDATSTGTPTLHDGTLFIPVSSLEVVSAANPTYKCCSFRGAVLAVDAKTG 296
Query: 163 RIIWQTYMLPDNGGKRG---------GYSGAAVWGSSPAIDVIRRQKQNNQTTKPTHPDQ 213
+W++Y + + G SGA VW +SP +D R T P
Sbjct: 297 EEVWKSYTVDETPAPVGKNAIGVDILAPSGAPVW-NSPTVDATRGLVYVGTGQSYTSP-- 353
Query: 214 CISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCL-------VPNNPDCPPGPNLDA 266
+D +++I+A D+ +G W +D + C +PN +CP D
Sbjct: 354 ---ADGNSDAIMAFDMKTGEKRWVSQQLAHDAWNVACYRSFGGGAIPNV-NCPEEDGPDF 409
Query: 267 DFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDIIWFKLAGPGGREGGGVWGAA 326
DFG L+T+ + + VVV QKSG A D D+G+ +W G GG +GG +G A
Sbjct: 410 DFGAGTALVTLESG---KQVVVGGQKSGDAVGVDPDTGETLWKTRVGRGGTQGGVHFGMA 466
Query: 327 TDGRRVYTNI-----VNNDRIIWSTADPS 350
DG +Y I ++ R +S DP+
Sbjct: 467 ADGGTLYVPINDKPFPDDHRYEYSKMDPN 495
>gi|334145345|ref|YP_004538555.1| pyrrolo-quinoline quinone [Novosphingobium sp. PP1Y]
gi|333937229|emb|CCA90588.1| pyrrolo-quinoline quinone [Novosphingobium sp. PP1Y]
Length = 619
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 97/319 (30%), Positives = 148/319 (46%), Gaps = 43/319 (13%)
Query: 20 INPVTVRNLRLRWSFYA--GKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWE-QNL 76
I+P V +L L+W+ + + PA A G V + + A + G L W ++
Sbjct: 148 ISPEDVGDLELKWAIAIPNATRVRSQPAFAGGAVILGGQDNAVRAFDEKTGCLRWSFESD 207
Query: 77 SKLTGLSGTGIVVNV----------------TVAVVVAVSRSNGELVWSTQIDPRPRSQI 120
+++ TGIVV AV G+ VW D + +
Sbjct: 208 AEVR----TGIVVQSWDRDDAKANPLAFFGDVTGNAYAVEAFTGKQVWKISADDHASTTL 263
Query: 121 TMSGSVYMGAFYVGLSSLEEALPADQ---CCTFRGSLAKLDVRNGRIIWQTYMLPD---- 173
T + +V+ G Y+ +SSLEE + CCTFRGSL +D G+ W+TY++P+
Sbjct: 264 TGTPAVHEGVVYIPVSSLEEGAASSAGYPCCTFRGSLLAVDAATGKTRWRTYLVPEPKVG 323
Query: 174 ----NGGKRGGYSGAAVWGSSPAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDI 229
G G SGA VW S+P ID R + T P +S +++VAL+I
Sbjct: 324 SPGVTGKALYGPSGAPVW-SAPTIDARRGRIYVATGDNYTGPGTDLS-----DALVALEI 377
Query: 230 DSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVA 289
DSG +AW G D++ C + +CP D DFG AP +L + +G R++++
Sbjct: 378 DSGAVAWHYQALGADVWNGACEESDRANCPEEDGPDFDFG-APPVLAATHDG--REMILL 434
Query: 290 VQKSGFAWAFDRDSGDIIW 308
QKSG A+ D DSG ++W
Sbjct: 435 GQKSGIAYGVDPDSGKLVW 453
>gi|119476653|ref|ZP_01616963.1| putative PQQ-dependent polyvinyl alcohol dehydrogenase precursor
[marine gamma proteobacterium HTCC2143]
gi|119449909|gb|EAW31145.1| putative PQQ-dependent polyvinyl alcohol dehydrogenase precursor
[marine gamma proteobacterium HTCC2143]
Length = 619
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 106/368 (28%), Positives = 164/368 (44%), Gaps = 39/368 (10%)
Query: 2 LNHGGDLNNRRYAYGEVL--INPVTVRNLRLRWSFYAGKDISA--TPAVANGVVYFPSWN 57
L G D N+R+ YG+ L IN + L L W+F I A PA+A G VY S N
Sbjct: 126 LGWGVDQTNQRH-YGKHLTDINANNIDQLELAWAFAYPDAIRARSEPALAGGAVYVGSQN 184
Query: 58 GYLYAVNAFNGALIWE-QNLSKLTGL-----------SGTGIVVNVTVAVVVAVSRSNGE 105
G ++A++ G + W + ++++ S + + V +++ GE
Sbjct: 185 GTVFALDQQTGCIRWTFKTIAEIRNSIVIEPWTVGKNSNPALFFGDIIGNVYSLNAVTGE 244
Query: 106 LVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPAD---QCCTFRGSLAKLDVRNG 162
L+W + D P +T + + G YV LSSLE AD CCTFRG +A D G
Sbjct: 245 LLWRDRPDDHPSLTLTATPLLNEGTLYVPLSSLEVTQAADPGYACCTFRGGVAAYDAATG 304
Query: 163 RIIWQTYMLPDN---------GGKRGGYSGAAVWGSSPAIDVIRRQKQNNQTTKPTHPDQ 213
W Y + G + SG+ VW ++P++D R + P
Sbjct: 305 EKRWVGYTIDQAPTVVGQNAVGTDQIAPSGSPVW-NTPSLDSKRGVMYVGTGENYSSP-- 361
Query: 214 CISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPM 273
++ +++I+AL + G I W + + D + C +CPP D DFG A +
Sbjct: 362 ---ANDTSDAILALSLKDGSIVWRQQMTRGDAWNMGCETEERINCPPEDGPDYDFGAATI 418
Query: 274 LLTISTNGRFRDVVVAVQKSGFAWAFDRDS-GDIIWFKLAGPGGREGGGVWGAATDGRRV 332
L +TN +D+V+A QKSG + D D G I+W G GG +GG +G +
Sbjct: 419 L---ATNKAGKDIVLAGQKSGEVFGLDPDQGGKILWRVKLGKGGIQGGVHFGMTVSKDTL 475
Query: 333 YTNIVNND 340
Y + + D
Sbjct: 476 YVPMSDFD 483
>gi|119475693|ref|ZP_01616046.1| putative PQQ-dependent polyvinyl alcohol dehydrogenase precursor
[marine gamma proteobacterium HTCC2143]
gi|119451896|gb|EAW33129.1| putative PQQ-dependent polyvinyl alcohol dehydrogenase precursor
[marine gamma proteobacterium HTCC2143]
Length = 537
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 97/332 (29%), Positives = 149/332 (44%), Gaps = 32/332 (9%)
Query: 20 INPVTVRNLRLRWSFYAGKDISAT-PAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSK 78
IN L L+W++ D + P V ++ L A++ G + WE N K
Sbjct: 67 INADNASTLSLKWAYGLSTDQPRSYPLVTEDTLFIGDGGRGLVALDKETGCVRWENNSIK 126
Query: 79 LTGLS--------GTGIVVNVTVAVVVAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGA 130
S T ++ + + V AV S G+ VWS+ P + S Y
Sbjct: 127 DISTSIISEQVDGRTLLIFSGRRSGVHAVDASTGDNVWSSVPKVHPVPLFSGSPLAYKDT 186
Query: 131 FYVGLSSLEEALPADQ---CCTFRGSLAKLDVRNGRIIWQTYMLPDNGG----------K 177
+V +SSLE L A+ CCT G +A LDVR G ++W + G +
Sbjct: 187 IFVPISSLEIGLSANPFYGCCTTSGGMAALDVRTGELLWYRPTIEKAGSVITGKHYLFVE 246
Query: 178 RGGYSGAAVWGSSPAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWA 237
+ G SGA VWG+ P +D Q + + + + + + +++I A+ +G IAW
Sbjct: 247 KRGPSGAPVWGA-PMLDT-----QRDLLFFGSGQNYSLPASLTSDAIFAVHTKTGEIAWV 300
Query: 238 KPLGGYDIFYFTCLVP-NNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFA 296
K D F C + ++P+CP D DFG AP LLT +G+ D+++A QKSG
Sbjct: 301 KQFTADDTFNMACTISIDHPNCPSTMGPDVDFG-APPLLTQRLSGQ--DILIAGQKSGDV 357
Query: 297 WAFDRDSGDIIWFKLAGPGGREGGGVWGAATD 328
+ + ++G IW G GG GG WG A +
Sbjct: 358 YGINPNTGQTIWSTRFGRGGPLGGVHWGIAAN 389
>gi|58616574|ref|YP_195704.1| putative PQQ-dependent polyvinyl alcohol dehydrogenase precursor
[Aromatoleum aromaticum EbN1]
gi|56316037|emb|CAI10680.1| putative PQQ-dependent polyvinyl alcohol dehydrogenase precursor
[Aromatoleum aromaticum EbN1]
Length = 640
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 115/429 (26%), Positives = 179/429 (41%), Gaps = 84/429 (19%)
Query: 9 NNRRYAYGEVL-INPVTVRNLRLRWS--FYAGKDISATPAVANGVVYFPSWNGYLYAVNA 65
+NRR+ + V L+L+W+ F K + P VA G VY S +G +YA +
Sbjct: 149 DNRRFVPTSASGLTKEDVPKLKLKWAYAFPDAKQARSQPVVAYGAVYVGSQDGTVYAFDL 208
Query: 66 FNGALIWEQNLSKLTGLSGTGIVVNVT-----------------VAVVVAVSRSNGELVW 108
G W S+++G T +V + V A+ G+++W
Sbjct: 209 ETGCAKW---TSQVSGEVRTTVVAEQLPPEAAPGRLPRLFFGDYLGNVYAMDALTGKVLW 265
Query: 109 STQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQ---CCTFRGSLAKLDVRNGRII 165
T+ D + IT + + G YV +SSLE D+ CCTFRGS+ LD+ G I
Sbjct: 266 RTRPDDHANATITGTPVPHDGLLYVPVSSLEVLNALDEKYACCTFRGSVTALDMNTGEIR 325
Query: 166 WQTYMLPDNGGKRG---------GYSGAAVWGSSPAIDVIRRQKQNNQTTKPTHPDQCIS 216
W+ + + + +G G SGA VW +SP ID R + P
Sbjct: 326 WRHFTVEEKPAVKGKTTVGTPILGPSGAPVW-NSPTIDAARGVLYFGSGENYSSP----- 379
Query: 217 SDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTC-LVPNNPDCPP--GPNLDADFGEAPM 273
+D ++++ A+D+ +G W D + +C +P+CP GP DF A
Sbjct: 380 ADRNSDAVFAVDLKTGERRWQFQTTSRDSWNGSCSFATGHPNCPEENGP----DFDIAAS 435
Query: 274 LLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDIIWFKLAGPGGREGGGVWGAATDGRRVY 333
+L + G+ RD++V KSG ++G +W G G +GG +G A +G RVY
Sbjct: 436 VLKVEA-GKGRDILVVAPKSGNVHGLSPNTGRQVWQSRVGQGSIQGGTHFGMAAEGWRVY 494
Query: 334 TNIVN------------------------NDRIIWSTADPSNETAHG----------PVT 359
+V+ N +W+ +P E HG VT
Sbjct: 495 VPVVDVMMKADGTPHDQAGAPGLNAIDARNGVTLWTHREP-EELCHGRKFCEPGVSAAVT 553
Query: 360 VVNGVLFAG 368
+ GV+FAG
Sbjct: 554 AMPGVVFAG 562
>gi|296082877|emb|CBI22178.3| unnamed protein product [Vitis vinifera]
Length = 121
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/165 (37%), Positives = 79/165 (47%), Gaps = 47/165 (28%)
Query: 106 LVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRII 165
L WST++D P S + +SG+ Y FYVG SSLEEA + CCTFRGSL KLD ++G I+
Sbjct: 2 LGWSTRLDNHPASLVAVSGTFYNWDFYVGTSSLEEASDQEHCCTFRGSLCKLDTKSGAIL 61
Query: 166 WQTYMLPDNGGKRGGYSGAAVWGSSPAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIV 225
W+T LPDNGG G Y+GA
Sbjct: 62 WKTLTLPDNGGGMGEYAGA----------------------------------------- 80
Query: 226 ALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGE 270
G + W LG YD++ C + +CP GPN DADFG+
Sbjct: 81 ------GDVKWYMQLGSYDVWLLACTNLSTANCPLGPNPDADFGK 119
>gi|408407928|sp|Q588Z1.3|PVADH_SPHS1 RecName: Full=Polyvinylalcohol dehydrogenase; Short=PVA
dehydrogenase; Short=PVADH; AltName: Full=Polyvinyl
alcohol dehydrogenase (cytochrome); Flags: Precursor
gi|157144277|dbj|BAD95543.3| polyvinylalcohol dehydrogenase [Sphingopyxis sp. 113P3]
gi|383506233|gb|AFH37775.1| poly-vinyl alcohol dehydrogenase [synthetic construct]
Length = 654
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 96/363 (26%), Positives = 155/363 (42%), Gaps = 45/363 (12%)
Query: 7 DLNNRRYAYGEVLINPVTVRNLRLRWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAF 66
+ +N R+ L + + L+L+W+F + V ++ S +G +YA+NA
Sbjct: 160 EKDNGRFQRKPAL-DVADIPKLKLKWAFQYPGSKNGQATVIGDRLFTTSTSGAVYALNAK 218
Query: 67 NGALIWEQNLSKLTGLS------------GTGIVVNVTVAVVVAVSRSNGELVWSTQIDP 114
G + W T S T + + VA+ G+ +W T +D
Sbjct: 219 TGCVYWRHAAEGATRTSPVIAALPEGAPAKTALFFSDFTKAAVALDAETGKQLWKTVVDD 278
Query: 115 RPRSQITMSGSVYMGAFYVGLSSLEEA---LPADQCCTFRGSLAKLDVRNGRIIWQTYM- 170
+P Q+T S + + G YV +SS EA +P +CC FRG+L LD G+I+W+ Y
Sbjct: 279 QPALQMTGSITYWDGKIYVPISSGTEAFAQIPTWECCKFRGALVALDAATGKILWKRYTT 338
Query: 171 --------LPDNGGKRGGYSGAAVWGSSPAIDVIRRQ----KQNNQTTKPTHPDQCISSD 218
L G + G SG A+W +P +D RR N+ T P
Sbjct: 339 EQEPRPFKLNKAGRQMWGPSGGAIW-VTPTVDEARRLIYVGTSNSYTDVPYD-------- 389
Query: 219 IYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLV--PNNPDCPPGPNLDADFGEAPMLLT 276
++S++A+D D+G + W L D + C + +CP D G AP+
Sbjct: 390 -NSDSVMAIDADTGAVRWTVQLLADDNYIDGCWQKGKEHANCPNPLGPDFSIGAAPIYRK 448
Query: 277 ISTNGRFRDVVVAVQKSGFAWAFD-RDSGDIIWFKLAGPGGREGGGVWGAATDGRRVYTN 335
++ F ++ QKSG +A D + G IW + G GG +G A D +VY
Sbjct: 449 MADGKEF---LLVGQKSGMIYALDPANKGAKIWERQLSLGSALGGIEFGTAADDGKVYAG 505
Query: 336 IVN 338
+ +
Sbjct: 506 VSD 508
>gi|254482335|ref|ZP_05095575.1| PQQ enzyme repeat domain protein [marine gamma proteobacterium
HTCC2148]
gi|214037340|gb|EEB78007.1| PQQ enzyme repeat domain protein [marine gamma proteobacterium
HTCC2148]
Length = 648
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 100/362 (27%), Positives = 163/362 (45%), Gaps = 41/362 (11%)
Query: 9 NNRRYAYGEVL-INPVTVRNLRLRWSFYAGK--DISATPAVANGVVYFPSWNGYLYAVNA 65
+NRRY ++ I V L L W+ K D+ + PA+ +YF G LYA++
Sbjct: 143 DNRRYLGPKLTGIKRSNVDQLELAWALAFPKVTDMRSQPAIIGNTLYFGDKTGKLYAIDR 202
Query: 66 FNGALIWEQNLSKLTGLSGTGIVVNV-----------TVAVVVAVSRSNGELVWSTQIDP 114
G ++ ++ L+G+ V+ ++A + AV E+ W
Sbjct: 203 QRGCVL--RHTEVLSGIRSAITVITSNEGVESLVFADSLASIFAVDPITLEVRWQHSARL 260
Query: 115 RPRSQITMSGSVYMGAFYVGLSSLEEAL---PADQCCTFRGSLAKLDVRNGRIIWQTYML 171
S IT S S + +V +SS E A+ P CC G L LD +G +W+ +
Sbjct: 261 FDTSVITGSISYHNNRLFVPVSSYEVAVSGSPHYACCHSHGGLIALDANSGERLWEWHAT 320
Query: 172 PD---NGGKRGGY-----SGAAVWGSSPAIDVIRRQKQNNQTTKPTHPDQCISSDIYANS 223
D G R G SGA+VW ++PAID R + THP S ++
Sbjct: 321 EDASLRGQTRAGIDIFGPSGASVW-TTPAIDSKRGRLYFGTGENMTHPATDTS-----DA 374
Query: 224 IVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTISTNGRF 283
I+ALD+ SG++AW D++ C + P+CP P D DFG + + I+ +
Sbjct: 375 IIALDMASGQLAWKFQATEGDVWNAGCW-GDGPNCPENPGGDFDFGAS---VIIAEDAGG 430
Query: 284 RDVVVAVQKSGFAWAFDRD----SGDIIWFKLAGPGGREGGGVWGAATDGRRVYTNIVNN 339
R++++A QKSG +A + + G+++W + G GG WG + G + + +
Sbjct: 431 RELLLAGQKSGEVYALNPEPSSAQGELLWHQRVSDGTTNGGIHWGMSLSGNTLVVPVADP 490
Query: 340 DR 341
+R
Sbjct: 491 ER 492
>gi|386285806|ref|ZP_10063014.1| glucose dehydrogenase [gamma proteobacterium BDW918]
gi|385281259|gb|EIF45163.1| glucose dehydrogenase [gamma proteobacterium BDW918]
Length = 648
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 101/363 (27%), Positives = 161/363 (44%), Gaps = 41/363 (11%)
Query: 9 NNRRY-AYGEVLINPVTVRNLRLRWSFYAGK--DISATPAVANGVVYFPSWNGYLYAVNA 65
NRR+ + + LI+ V +L L WSF + D+ + PAV ++ G L+ +N
Sbjct: 146 ENRRFISSKQTLIDANNVGDLSLAWSFAFPRVSDMRSQPAVIGDRLFVGDKAGKLFVLNR 205
Query: 66 FNGALIWEQNLSKLTGLSGTGIVVNVT-----------VAVVVAVSRSNGELVWSTQIDP 114
+G +I + ++G+ V ++ +A V A+ + ++VW
Sbjct: 206 HSGCVIAHTKM--ISGIRSAITVATLSDSRQLLVFADSLATVYALDPNTLDIVWQRSARL 263
Query: 115 RPRSQITMSGSVYMGAFYVGLSSLEEAL---PADQCCTFRGSLAKLDVRNGRIIWQTYML 171
S I+ S S + YV +S E A P+ CCT G + L +G +W +
Sbjct: 264 NNYSVISGSISYHDDRLYVPISLFEVAAAGSPSHICCTSHGGVMALAADSGDKLWTWHAS 323
Query: 172 PDN--------GGKRGGYSGAAVWGSSPAIDVIRRQKQNNQTTKPTHPDQCISSDIYANS 223
D G R G SGAAVW S+P IDV Q N+ T + + +++
Sbjct: 324 RDAILQGKNRVGQDRYGPSGAAVW-STPTIDV-----QRNRLYIGTGENLSAPATDTSDA 377
Query: 224 IVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTISTNGRF 283
++ALD+DSG + W DI+ CL +CP P D DFG + ++
Sbjct: 378 VIALDLDSGDLVWKFQATAGDIWNAACL-NGGANCPDNPGQDFDFGASIIIADFDG---- 432
Query: 284 RDVVVAVQKSGFAWAFDRDSGD---IIWFKLAGPGGREGGGVWGAATDGRRVYTNIVNND 340
R +++A QKSG +A + D D ++W K G GG WG A G +Y I + +
Sbjct: 433 RQLLLAGQKSGEVFALNPDGNDKQRVVWRKRLSQGTSNGGIHWGMALAGDSLYVPIADPE 492
Query: 341 RII 343
R +
Sbjct: 493 REV 495
>gi|116194782|ref|XP_001223203.1| hypothetical protein CHGG_03989 [Chaetomium globosum CBS 148.51]
gi|88179902|gb|EAQ87370.1| hypothetical protein CHGG_03989 [Chaetomium globosum CBS 148.51]
Length = 483
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 114/437 (26%), Positives = 172/437 (39%), Gaps = 87/437 (19%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAGKDISATPAVANGVVYFPSWNGYL 60
W GG N +A G ++ ++ +L L SA PA+ Y+P++NG
Sbjct: 26 WAGWGGSHLNNHWAEGNRDLSSRSIASLSLHCKIPDPVGQSAPPAIRGSYAYYPTYNGSF 85
Query: 61 YAVNAFNGALIWEQNLSKLTG----LSGTGIVVNVTV---------------------AV 95
A+N + W N++++ ++ ++V+V V A+
Sbjct: 86 IALNYKTCEIKWNLNVTQVIADYAPITPLQLLVSVAVSRTSPQIDAANKILFFGTQIHAL 145
Query: 96 VVAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALP-----ADQCCTF 150
VVA G ++ Q++P + IT S ++Y +VG+SS EE CC+F
Sbjct: 146 VVAADLDTGTVLGVQQVNPHELATITSSPTLYDNTLFVGVSSAEENAAYFTNGTYPCCSF 205
Query: 151 RGSLAKLDVRNG--------------RIIWQTY--------------MLPDNGGKRGGYS 182
G+ A R+ + T + P G +S
Sbjct: 206 IGNAAAFHFTRTHTSGTTTTMGTTPHRLQFTTLWNITTIPTNLPPPPLTPGEAGPPLRWS 265
Query: 183 GAAVWGSSPAIDVIRRQ---KQNNQTTKPT---------HPDQCISSDIYANSIVALDID 230
GA +WGS P IDV R Q N T P + C S ++ S+ ALD+
Sbjct: 266 GAGIWGSQPPIDVARHQIIFATGNTYTVPQAFFHCAEAGADEHCFPSYVWQESVFALDLR 325
Query: 231 SGRIAWAKPLGGYDIFYFTC----LVPNNPDCPPGPNLDADFGEAPMLL-----TISTNG 281
SGR W + L D + C L N CP P DADFG AP ++ G
Sbjct: 326 SGRANWVRRLDALDAWTLVCGTGDLPRNETLCPFTPGPDADFGMAPAIVRGGARGYGEGG 385
Query: 282 RFRDVVVAVQKSGFAWAFDRDSGDIIWFKLAGPGGREGGGVWGAATDGRRVYTNI----V 337
RD++ QKSG + D+G ++W PGG G V G RR+ + V
Sbjct: 386 GRRDLLTVGQKSGVLYGLAADTGAVLWVGADEPGGYARGFVVGG---WRRMMSGCIIPGV 442
Query: 338 NNDRIIWSTADPSNETA 354
N+ + W P N+TA
Sbjct: 443 NSGQQEW-VLQPQNKTA 458
>gi|197103523|ref|YP_002128900.1| glucose dehydrogenase [Phenylobacterium zucineum HLK1]
gi|196476943|gb|ACG76471.1| glucose dehydrogenase [Phenylobacterium zucineum HLK1]
Length = 642
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 101/376 (26%), Positives = 169/376 (44%), Gaps = 50/376 (13%)
Query: 2 LNHGGDLNN-RRYAYGEVLINPVTVRNLRLRWSFYAGK--DISATPAVANGVVYFPS-WN 57
L G DL+N RR + + + V +L + W+F + + + V +++P+
Sbjct: 139 LGFGVDLDNSRRMSAAQAGLKTKDVADLEVAWTFAFPRTSSLRSQGVVVGSTLFYPAGQT 198
Query: 58 GYLYAVNAFNGALIWEQNL----------SKLTGLSGTGIVVNVTVAVVVAVSRSNGELV 107
YL A++ +G + W L +L +V +VAV G++
Sbjct: 199 NYLVALDTKSGCVKWASELPSPIRNSLAVGRLGPKGPLAVVGGDNAGNLVAVDAKTGKVA 258
Query: 108 WSTQIDPRPRSQITMSGS--VYMGAFYVGLSSLEEA---LPADQCCTFRGSLAKLDVRNG 162
W ++DPR + +SGS + V +S+++ A P +CC G++ ++ +G
Sbjct: 259 W--RVDPRHDKNVPLSGSPLFHEDKIIVPVSAMDVANAMRPNFECCKSHGAVVAVEAASG 316
Query: 163 RIIWQTYMLPD---------NGGKRGGYSGAAVWGSSPAIDVIRRQKQNNQTTKPTHPDQ 213
R +W + + D G + G SGA +W SSPAID R+ T + T P
Sbjct: 317 RTLWTWHTMEDAKPLGRKTSTGVETYGPSGAPIW-SSPAIDP-RKGIVYTATGENTSPPA 374
Query: 214 CISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNP-------DC---PPGPN 263
+SD ++VA+D+ +G+ W D++ +C + P +C G
Sbjct: 375 TKTSD----AVVAIDLSTGKDRWVFQALENDVWNMSCPIGPPPPGQPLKPNCYFANEGSV 430
Query: 264 L-DADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDIIWFKLAGPGGREGGGV 322
L D DFG P++ R++++A QKSG WA + G ++W GPG GG
Sbjct: 431 LRDHDFGGGPVIFRGKGG---RELILAGQKSGDVWALEPRGGKVVWRHTFGPGTPLGGVH 487
Query: 323 WGAATDGRRVYTNIVN 338
WG ATDG RV+ I +
Sbjct: 488 WGLATDGVRVFAPISD 503
>gi|302805897|ref|XP_002984699.1| hypothetical protein SELMODRAFT_423793 [Selaginella moellendorffii]
gi|300147681|gb|EFJ14344.1| hypothetical protein SELMODRAFT_423793 [Selaginella moellendorffii]
Length = 146
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 57/150 (38%), Positives = 82/150 (54%), Gaps = 30/150 (20%)
Query: 122 MSGSVYMGA----------FYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYML 171
MSG+ Y G+ ++VG+SS +E D CC+F+GS KLD+R G ++W+T ML
Sbjct: 1 MSGTAYQGSSHQCDVITSGYFVGVSSAQEVFEPD-CCSFQGSFQKLDLRTGEVLWRTSML 59
Query: 172 PDNGGKRGGYSGAAVWGSSPAIDVIRRQ---KQNNQTTKPTHPDQCISSD---------- 218
P+ G++GAAVWGSSP I+ RR N T P ++C ++
Sbjct: 60 PEG----SGFTGAAVWGSSPPIEKRRRLIYIATGNLYTAPREVEECEAARATNTTGRNPD 115
Query: 219 --IYANSIVALDIDSGRIAWAKPLGGYDIF 246
+ S+VALD+DSG I WA LG D++
Sbjct: 116 DPFHHESVVALDLDSGEICWAARLGELDVW 145
>gi|255552882|ref|XP_002517484.1| conserved hypothetical protein [Ricinus communis]
gi|223543495|gb|EEF45026.1| conserved hypothetical protein [Ricinus communis]
Length = 182
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 79/188 (42%), Positives = 93/188 (49%), Gaps = 53/188 (28%)
Query: 273 MLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDIIWFKLAGPGGREGGGVWGAATDGRRV 332
M+L+I NG + +VVA+QKSGFAWA DR +G I AGPGG GGG WGAA D +RV
Sbjct: 1 MMLSIYVNGTMQGLVVAIQKSGFAWAVDRITGSHIRSTEAGPGGLGGGGYWGAAIDEKRV 60
Query: 333 YTNIVN--------------------------NDRIIWSTADPSNETAHGPVTVVNGVLF 366
YTNI N N I+WS DPSN TA VT+ NGVLF
Sbjct: 61 YTNIANSESKIFTLKPSKKNTTAGGWVGMDAKNGEILWSVGDPSNGTASDHVTIANGVLF 120
Query: 367 AGSVSANG-------------------STVYGGVPASYGCIYLGNGYTVSLGKFHPTWTP 407
GS G +++YGGV S GC+Y GNGY +
Sbjct: 121 GGSTYKKGPIYALNARNGRILWLHETEASIYGGVSVSDGCVYFGNGY--------RGFVA 172
Query: 408 GTSLYAFC 415
GTSL AFC
Sbjct: 173 GTSLLAFC 180
>gi|182681916|ref|YP_001830076.1| Pyrrolo-quinoline quinone [Xylella fastidiosa M23]
gi|182632026|gb|ACB92802.1| Pyrrolo-quinoline quinone [Xylella fastidiosa M23]
Length = 612
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 80/330 (24%), Positives = 140/330 (42%), Gaps = 58/330 (17%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAGKDISATPAVANGVVYFPSWNGYL 60
WL GG L N + LI+ + L+++WS + A+ + N +Y S NG L
Sbjct: 39 WLTAGGGLLNTNFQPDGWLIDSSNITQLQMQWSLSTQGGLPASSTIDNHSLYVSSSNGTL 98
Query: 61 YAVNAFNGALIWEQNLSKLTG------LSGTGIVVNVTVA------VVVAVSRSNGELVW 108
++A G+L+W LS TG L T I V ++A+++++G L+W
Sbjct: 99 NKIDAQTGSLLWSIPLSNYTGNPHSLSLKSTAIAPQSIVVGDQNSGTLLALNKTSGTLLW 158
Query: 109 STQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQT 168
T I+P ++IT ++Y YVG+ S + + ++A LD++ G+ +WQ+
Sbjct: 159 KTTIEPNLNAKITSPPTIYEDRVYVGVYSGKS----------QSNIAALDLKTGQPLWQS 208
Query: 169 YMLPDNGGKRGGYSGAAVWGS---SPAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIV 225
+P+ GA + G +P+ + N+ P H + ++++
Sbjct: 209 NSVPN---------GAVINGPLTINPSKKRLYALTSNSGQASPLHN--------HTDTLL 251
Query: 226 ALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRD 285
LD+ +G + + L PN D +L T++ NG RD
Sbjct: 252 VLDMKNGALLLKQSL----------------KESTDPNTDNANKNGAILFTLNINGTTRD 295
Query: 286 VVVAVQKSGFAWAFDRDSGDIIWFKLAGPG 315
VV + G D ++G I+W PG
Sbjct: 296 VVAIPEAQGHYQVLDANNGTILWSTDITPG 325
>gi|254284146|ref|ZP_04959114.1| pyrrolo-quinoline quinone [gamma proteobacterium NOR51-B]
gi|219680349|gb|EED36698.1| pyrrolo-quinoline quinone [gamma proteobacterium NOR51-B]
Length = 639
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 92/333 (27%), Positives = 142/333 (42%), Gaps = 39/333 (11%)
Query: 32 WSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWE--------QNLSKLTGLS 83
++F + + P +A G V+ S G +YA + G W+ ++ T +
Sbjct: 184 FAFPSATRARSQPVIAGGAVFVGSHKGIVYAFDLETGCTRWQFVAGAEVRTGMTLQTWEA 243
Query: 84 GTG-----IVVNVTVAVVVAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSL 138
G + A+ +GELVW ++D P +T S + YV LSSL
Sbjct: 244 GDDDAQPLLFFGDLTGHQYALDAFSGELVWRKRMDEHPGVTLTASAVLQGDTLYVPLSSL 303
Query: 139 EEALPAD---QCCTFRGSLAKLDVRNGRIIWQTYMLPDN--------GGKRGGYSGAAVW 187
E D QCC+FRG++ ++ G +W+ + LP G R G SGA VW
Sbjct: 304 EVGAAIDPEYQCCSFRGAVVAVEASTGEELWRAHWLPPAQPLGANPVGTPRLGPSGAPVW 363
Query: 188 GSSPAI--DVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDI 245
+SPA D + N ++ T ++S++A++ SG I W D
Sbjct: 364 -NSPAFWGDYLYVGTGENYSSPATD---------TSDSVIAVNRHSGEIEWVYQAHTNDA 413
Query: 246 FYFTCLVPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGD 305
+ +C +CP D DFG AP+ I+ V+VA KSG D+G+
Sbjct: 414 WNASCEEATRYNCPEEDGPDYDFGAAPV---IAYTEEGEPVLVAGGKSGLVVGLKPDTGE 470
Query: 306 IIWFKLAGPGGREGGGVWGAATDGRRVYTNIVN 338
++W G GG G +G AT G RV+ I +
Sbjct: 471 LLWKNKVGRGGVVAGVHFGIATFGGRVFVPISD 503
>gi|1220118|dbj|BAA12104.1| dehydrogenase [Pseudomonas sp.]
Length = 644
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 91/362 (25%), Positives = 147/362 (40%), Gaps = 44/362 (12%)
Query: 7 DLNNRRYAYGEVLINPVTVRNLRLRWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAF 66
+ +N R+ L + + L+L+W+F + V ++ S +G +YA+NA
Sbjct: 160 EKDNGRFQRKPAL-DVADIPKLKLKWAFQYPGSKNGQATVIGDRLFTTSTSGAVYALNAK 218
Query: 67 NGALIWEQNLSKL----------TGLSGTGIVVNVTVAVVVAVSRSNGELVWSTQIDPRP 116
G + W S+ T + + VA+ G+ +W T +D +P
Sbjct: 219 TGCVYWRHRRSEARTSPVIAALPEARHKTALFFSDFTKAAVALDAETGKQLWKTVVDDQP 278
Query: 117 RSQITMSGSVYMGAFYVGLSSLEEA---LPADQCCTFRGSLAKLDVRNGRIIWQTYM--- 170
Q+T S + + G YV +SS EA +P +CC FRG+L LD G+I+W+ Y
Sbjct: 279 ALQMTGSITYWDGKIYVPISSGTEAFAQIPTWECCKFRGALVALDAATGKILWKRYTTEQ 338
Query: 171 ------LPDNGGKRGGYSGAAVWGSSPAIDVIRRQ----KQNNQTTKPTHPDQCISSDIY 220
L G + G SG A+W +P +D RR N+ T P
Sbjct: 339 EPRPFKLNKAGRQMWGPSGGAIW-VTPTVDEARRLIYVGTSNSYTDVPYD---------N 388
Query: 221 ANSIVALDIDSGRIAWAKPLGGYDIFYFTCLV--PNNPDCPPGPNLDADFGEAPMLLTIS 278
++S++A+D D+G + W L D + C + +CP D G AP L
Sbjct: 389 SDSVMAIDADTGAVRWTVQLLADDNYIDGCWQKGKEHANCPNPLGPDFSIGRAPYL---Q 445
Query: 279 TNGRFRDVVVAVQKSG--FAWAFDRDSGDIIWFKLAGPGGREGGGVWGAATDGRRVYTNI 336
+G + V + G F W + G GG +G A D +VY +
Sbjct: 446 EDGGRKGVSPCRAEIGHDLRARFRPTRARRFWERQLSLGSALGGMEFGTAADDGKVYAGV 505
Query: 337 VN 338
+
Sbjct: 506 SD 507
>gi|410457432|ref|ZP_11311242.1| putative pyrrolo-quinoline quinone [Bacillus bataviensis LMG 21833]
gi|409925177|gb|EKN62401.1| putative pyrrolo-quinoline quinone [Bacillus bataviensis LMG 21833]
Length = 749
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 95/344 (27%), Positives = 148/344 (43%), Gaps = 73/344 (21%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAGKDIS------ATPAVANGVVYFP 54
W HGGD+ N RY+ E I V+NL++ W G + ATP V +GV++
Sbjct: 92 WPTHGGDIRNSRYSSLE-QITASNVKNLKVEWVTSLGSGVEFKYSGEATPLVYDGVMFTI 150
Query: 55 SWNGYLYAVNAFNGALIWEQNLSKLTGLS-------------GTGIV-VNVTVAVVVAVS 100
+ + A++ G +IWE GL+ G G V V + A +VA+
Sbjct: 151 TGANQVQALDVKTGKMIWEYRPVIANGLNTVCCGWTTRGVAIGDGKVYVGLLDARLVALD 210
Query: 101 RSNGELVWSTQIDPRPRSQITMSGSVYM-GAFYVGLSSLEEALPADQCCTFRGSLAKLDV 159
+ G++VW T++D + S +Y G Y G++ E + RG +A D
Sbjct: 211 QKTGKVVWETRVDDWEKGYTITSAPLYYDGKVYTGVAGGEYGI--------RGYVAAYDS 262
Query: 160 RNGRIIWQTYMLPDNGGKRGG----------YSGAAVWGSSPAID----VIRRQKQNNQT 205
GR IW++Y LP G K GA VW +PAID +I N
Sbjct: 263 ELGRQIWRSYTLPAPGAKGSETWPKDSKNWLTGGAPVW-QTPAIDPDLGLIYFSTGN--- 318
Query: 206 TKPTHPDQCISS----DIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPG 261
T PD S+ +++ANSI+ALD ++G W +DI+ + P+NP
Sbjct: 319 ---TSPDLDGSNREGDNLFANSILALDANTGEYKWHFQEVHHDIW---DMDPSNP----- 367
Query: 262 PNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGD 305
+L + G+ R + K+G+ + DR +G+
Sbjct: 368 ----------VVLFDVKMKGQMRKGMAQAGKTGWLYILDRANGE 401
>gi|345020003|ref|ZP_08783616.1| quinoprotein ethanol dehydrogenase precursor [Ornithinibacillus
scapharcae TW25]
Length = 748
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 91/342 (26%), Positives = 146/342 (42%), Gaps = 69/342 (20%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAGKDI------SATPAVANGVVYFP 54
W+ HGGD+ NRRY+ E IN V +L+L W G + TP V +G+++
Sbjct: 90 WITHGGDMYNRRYSALEK-INTSNVADLKLEWVTSLGSGLEFKYSAEGTPIVYDGIMFNI 148
Query: 55 SWNGYLYAVNAFNGALIWEQN--------------LSKLTGLSGTGIVVNVTVAVVVAVS 100
+ + A++A G +IWE +S+ GL + V + + +VA+
Sbjct: 149 TGADVVQAMDATTGEIIWEYVPQIADGLDTACCGWISRGVGLGDGKVYVGLLDSRLVALD 208
Query: 101 RSNGELVWSTQI-DPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDV 159
+ GE++W T++ D IT + Y Y+G++ E + RG LA D
Sbjct: 209 QKTGEVLWETKVADWEKGYTITAAPLFYDDKVYIGVAGGEYGI--------RGYLAAYDA 260
Query: 160 RNGRIIWQTYMLP------------DNGGKRGGYSGAAVWGSSPAIDVIRRQKQNNQTTK 207
GR IW+TY +P DN G GA +W +PAID +T
Sbjct: 261 DMGREIWRTYTVPGPGEVGHETWPQDNDAWLKG--GAPIW-QTPAID--PELNMIYLSTG 315
Query: 208 PTHPDQCISS----DIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPN 263
PD S+ +++A SI+ALD+D G W +DI+
Sbjct: 316 NPSPDFDGSNREGDNLFAASILALDLDDGEYKWHFQEVKHDIW----------------- 358
Query: 264 LDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGD 305
D D +L + +G+ R + K+G+ + DR +G+
Sbjct: 359 -DLDAPNPVILFDVEVDGKMRKGLGQAGKTGWVYLLDRTNGE 399
>gi|386002564|ref|YP_005920863.1| Cytochrome c class I [Methanosaeta harundinacea 6Ac]
gi|357210620|gb|AET65240.1| Cytochrome c class I [Methanosaeta harundinacea 6Ac]
Length = 727
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 93/339 (27%), Positives = 142/339 (41%), Gaps = 52/339 (15%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFY-----AGKDISATPAVANGVVYFPS 55
W GD N R A G IN V L + WSF A ++ P + VVYF
Sbjct: 45 WPLPNGDYENTRAAAGSA-INSENVGELGVVWSFPIPGIGAYGAAASNPIIVGDVVYFQD 103
Query: 56 WNGYLYAVNAFNGALIWEQ--NLSKLTGLSGTGI-----VVNVTVAVVVAVSRSNGELVW 108
++A++ G IW + N++++ G +G + V + V A+ GE VW
Sbjct: 104 LRCNVFALDLETGDPIWSRFYNVTEVVGPNGPAVGWGKVFVAKDLYNVTALDAGTGEEVW 163
Query: 109 STQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFR----GSLAKLDVRNGRI 164
+T++ + I + SVY G YV +P + G ++ LD G I
Sbjct: 164 TTRLSEVATTGIDIQPSVYAGLVYV------STVPGTGDVFYAPGGIGVISALDAETGDI 217
Query: 165 IWQ--TYMLPDNGGKRGGYSGAAVWGSSPAIDV---IRRQKQNNQTTKPTHPDQCISS-- 217
+W+ T PD G G SG W PA+DV I N P + +
Sbjct: 218 VWEFSTVDSPDLWGNPGVNSGGGAW-YPPAVDVETGITFWGTGNPAPFPGTEEWPSGTSR 276
Query: 218 ---DIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPML 274
++Y +S+VALD +G + W + +D+F D DF +P+L
Sbjct: 277 PGPNLYTDSLVALDHATGDMIWYHQVLPHDLF------------------DHDFQISPIL 318
Query: 275 LTISTNGRFRDVVVAVQKSGFAWAFDRDSGDIIWFKLAG 313
+ GR + VV K G +AFDR SG+++W + G
Sbjct: 319 AERDSGGRSQKVVYGAGKMGKVYAFDRTSGELLWSAVVG 357
>gi|28199185|ref|NP_779499.1| hypothetical protein PD1299 [Xylella fastidiosa Temecula1]
gi|386083225|ref|YP_005999507.1| hypothetical protein XFLM_00585 [Xylella fastidiosa subsp.
fastidiosa GB514]
gi|28057291|gb|AAO29148.1| conserved hypothetical protein [Xylella fastidiosa Temecula1]
gi|307578172|gb|ADN62141.1| hypothetical protein XFLM_00585 [Xylella fastidiosa subsp.
fastidiosa GB514]
Length = 541
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/301 (23%), Positives = 127/301 (42%), Gaps = 58/301 (19%)
Query: 30 LRWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG------LS 83
++WS + A+ + N +Y S NG L ++A G+L+W LS TG L
Sbjct: 1 MQWSLSTQGGLPASSTIDNHSLYVSSSNGTLNKIDAQTGSLLWSIPLSNYTGNPHSLSLK 60
Query: 84 GTGIVVNVTVA------VVVAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSS 137
T I V ++A+++++G L+W T I+P ++IT ++Y YVG+ S
Sbjct: 61 STAIAPQSIVVGDQNSGTLLALNKTSGTLLWKTTIEPNLNAKITSPPTIYEDRVYVGVYS 120
Query: 138 LEEALPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYSGAAVWGS---SPAID 194
+ + ++A LD++ G+ +WQ+ +P+ GA + G +P+
Sbjct: 121 GKS----------QSNIAALDLKTGQPLWQSNSVPN---------GAVINGPLTINPSKK 161
Query: 195 VIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPN 254
+ N+ P H + ++++ LD+ +G + + L
Sbjct: 162 RLYALTSNSGQASPLHN--------HTDTLLVLDMKNGALLLKQSL-------------- 199
Query: 255 NPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDIIWFKLAGP 314
PN D +L T++ NG RDVV + G D ++G I+W P
Sbjct: 200 --KESTDPNTDNANKNGAILFTLNINGTTRDVVAIPEAQGHYQVLDANNGTILWSTDITP 257
Query: 315 G 315
G
Sbjct: 258 G 258
>gi|417557869|ref|ZP_12208875.1| Uncharacterized protein of WD40 repeat family [Xylella fastidiosa
EB92.1]
gi|338179499|gb|EGO82439.1| Uncharacterized protein of WD40 repeat family [Xylella fastidiosa
EB92.1]
Length = 543
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/301 (23%), Positives = 127/301 (42%), Gaps = 58/301 (19%)
Query: 30 LRWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG------LS 83
++WS + A+ + N +Y S NG L ++A G+L+W LS TG L
Sbjct: 1 MQWSLSTQGGLPASSTIDNHSLYVSSSNGTLNKIDAQTGSLLWSIPLSNYTGNPHSLSLK 60
Query: 84 GTGIVVNVTVA------VVVAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSS 137
T I V ++A+++++G L+W T I+P ++IT ++Y YVG+ S
Sbjct: 61 STAIAPQSIVVGDQNSGTLLALNKTSGTLLWKTTIEPNLNAKITSPPTIYEDRVYVGVYS 120
Query: 138 LEEALPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYSGAAVWGS---SPAID 194
+ + ++A LD++ G+ +WQ+ +P+ GA + G +P+
Sbjct: 121 GKS----------QSNIAALDLKTGQPLWQSNSVPN---------GAVINGPLTINPSKK 161
Query: 195 VIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPN 254
+ N+ P H + ++++ LD+ +G + + L
Sbjct: 162 RLYALTSNSGQASPLHN--------HTDTLLVLDMKNGALLLKQSL-------------- 199
Query: 255 NPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDIIWFKLAGP 314
PN D +L T++ NG RDVV + G D ++G I+W P
Sbjct: 200 --KESTDPNTDNANKNGAILFTLNINGTTRDVVAIPEAQGHYQVLDANNGTILWSTDITP 257
Query: 315 G 315
G
Sbjct: 258 G 258
>gi|121605898|ref|YP_983227.1| Pyrrolo-quinoline quinone [Polaromonas naphthalenivorans CJ2]
gi|120594867|gb|ABM38306.1| Pyrrolo-quinoline quinone [Polaromonas naphthalenivorans CJ2]
Length = 573
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 83/360 (23%), Positives = 145/360 (40%), Gaps = 76/360 (21%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAG--KDISATPAVANGVVYFPSWNG 58
WL G R+ G IN V+NLR +SF + + P V +GV+Y +
Sbjct: 60 WLQTNGGYAQTRFYPGR-QINTGNVKNLRPEFSFQTEVRESMETAPIVVDGVMYMTTSYN 118
Query: 59 YLYAVNAFNGALIW--EQNLSKLT-----------GLSGTGIVVNVTVAVVVAVSRSNGE 105
++YA++A G W + + +T + G + + A +VA+ +G+
Sbjct: 119 HVYALDATTGREFWHYKHKMGPITTFCCGPNNRGVAIEGGKLFMGTLDAKLVALDAQSGK 178
Query: 106 LVWSTQI-DPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRI 164
++W TQI DP TMS +V G +G + E + RG + D R+G++
Sbjct: 179 VLWETQIADPEKGYSETMSPTVVEGKVLIGTNGGEYGI--------RGFVKAFDARDGKL 230
Query: 165 IWQTYMLPDNGGK----------RGGYS-------------------GAAVWGSSPAIDV 195
+W Y +P+ G + R + G VW +PA+D+
Sbjct: 231 LWTFYTIPEQGHEGVWAENDATGRNMHRDIKAEKEELARNSSFYQTLGGGVW-MNPAVDL 289
Query: 196 IRRQK--QNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVP 253
R + + + ++Y +S+VALD+DSG+ W +D++ + P
Sbjct: 290 KTRTIFFVVGNPSPDLYGAERPGDNLYTDSLVALDLDSGKYKWHSQYVAHDVWDLDAVSP 349
Query: 254 NNPDCPPGPNLDADFGEAPMLLTIS-TNGRFRDVVVAVQKSGFAWAFDRDSGDIIWFKLA 312
P+L+ + +G+ V+ K+G + DR G +I F A
Sbjct: 350 ------------------PILMDVKDKSGKMIPAVLHGGKTGHVYVHDRKDGKLIRFSEA 391
>gi|71730349|gb|EAO32432.1| quinoprotein [Xylella fastidiosa Ann-1]
Length = 504
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/301 (23%), Positives = 127/301 (42%), Gaps = 58/301 (19%)
Query: 30 LRWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG------LS 83
++WS + A+ + N +Y S NG L ++ G+L+W LS TG L
Sbjct: 1 MQWSLSTQGGLPASSTIDNHSLYVSSSNGTLNKIDTQTGSLLWSIPLSNYTGNPHSLSLK 60
Query: 84 GTGIVVNVTVA------VVVAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSS 137
T I V ++A+++++G L+W T I+P ++IT ++Y YVG+SS
Sbjct: 61 STAIAPQSIVVGDQNSGTLLALNKTSGTLLWKTTIEPNLNAKITSPPTIYEDRVYVGVSS 120
Query: 138 LEEALPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYSGAAVWGS---SPAID 194
+ + ++A LD++ G+ +WQ+ +P+ GA + G +P+
Sbjct: 121 GKS----------QSNIAALDLKTGQPLWQSNSVPN---------GAVINGPLTINPSKK 161
Query: 195 VIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPN 254
+ N+ P H + ++++ LD+ +G + + L
Sbjct: 162 RLYALTSNSGQASPLHN--------HTDTLLVLDMKNGALLLKQSL-------------- 199
Query: 255 NPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDIIWFKLAGP 314
PN D +L T++ NG RDVV + G D ++G I+W P
Sbjct: 200 --KESTDPNTDNANKNGAILFTLNINGTTRDVVAIPEAQGNYQVLDANNGTILWSTDITP 257
Query: 315 G 315
G
Sbjct: 258 G 258
>gi|116624095|ref|YP_826251.1| pyrrolo-quinoline quinone [Candidatus Solibacter usitatus
Ellin6076]
gi|116227257|gb|ABJ85966.1| Pyrrolo-quinoline quinone [Candidatus Solibacter usitatus
Ellin6076]
Length = 597
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 87/363 (23%), Positives = 148/363 (40%), Gaps = 67/363 (18%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSF----YAGKDISATPAVANGVVYFPSW 56
WL + GDL+ RY+ + IN LRL+W F YA + TP + GV+Y
Sbjct: 124 WLTYNGDLSANRYSSLKQ-INRTNAAGLRLKWIFPLPYYA---LETTPLESGGVMYVTGP 179
Query: 57 NGYLYAVNAFNGALIWEQNLSKLTGLSG-TGIVVNVTVAV-------------VVAVSRS 102
N +YA++A NG+ +W+ + + GL G + + N VA+ ++A+ R+
Sbjct: 180 N-QVYAIDALNGSQLWKYSRPQTRGLVGDSALGTNRGVAIHEGKVFFQTDNAHLLALDRA 238
Query: 103 NGELVWSTQI--DPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVR 160
GEL+W + +P P TM+ + G++ + + RG +A
Sbjct: 239 TGELLWEKAMPEEPNPNYGGTMAPLIVGDTVIAGVAGADHGI--------RGFIACYKAE 290
Query: 161 NGRIIWQTYMLPDNGGK-----------RGGYSGAAVWGSSPAIDVIRRQKQNNQTTKPT 209
G ++W+ + +P G RGG S P+ D + N
Sbjct: 291 TGALLWRHWTVPRKGEPGSETWQGSEPLRGGGSTWLTGSYDPSTDTLYWPTGNPWPDGDD 350
Query: 210 HPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFG 269
++Y N I+AL+ +G + W +D+ D D
Sbjct: 351 R--DRPGDNLYTNCILALNPHTGELKWHYQFTPHDV------------------KDRDAT 390
Query: 270 EAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDIIWFKLAGPGGREGGGVWGAATDG 329
E P+L+ + G R +++ ++GF + DR +G+++ L P R A DG
Sbjct: 391 EPPVLVDTTYCGTPRKLLLHADRNGFFYVLDRTTGELL---LTKPFLRRVDWATEIAPDG 447
Query: 330 RRV 332
R V
Sbjct: 448 RPV 450
>gi|167045157|gb|ABZ09819.1| putative PQQ enzyme repeat protein [uncultured marine microorganism
HF4000_APKG8K5]
Length = 562
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 84/358 (23%), Positives = 143/358 (39%), Gaps = 73/358 (20%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYA--GKDISATPAVANGVVYFPSWNG 58
+L+ G+ + RY + IN TV NLR W F + +P V NGV+Y +
Sbjct: 51 FLHTNGNYSQTRY-HPATQINKETVGNLRPAWIFQTEVKESQETSPIVVNGVMYVTTSFN 109
Query: 59 YLYAVNAFNGALIWE--QNLSKLT-----------GLSGTGIVVNVTVAVVVAVSRSNGE 105
++YA+NA G +W + +T + G + + A +VA++ S GE
Sbjct: 110 HVYALNAATGGELWHYAHKMGAITTYCCGPNSRGVAVYGDKVFIGTLDAKLVALNASTGE 169
Query: 106 LVWSTQI-DPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRI 164
+VW TQI DP TM+ + G +G + E + RG L D +G++
Sbjct: 170 VVWETQIADPELGYSETMAPTAVEGKILIGTNGGEYGI--------RGFLKAYDANSGKL 221
Query: 165 IWQTYMLPDNG----------------------------GKRGGYSGAAVWGSSPAIDVI 196
+W + +P+N G G VW +PA+D+
Sbjct: 222 LWTFHTIPENSVGVWATHDATGRDMLRDIAAEKKALKKLGDPYKTLGGGVW-QNPAVDLE 280
Query: 197 RRQKQNNQTTKPTHPDQCIS--SDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPN 254
RR+ D I ++Y NS++++D+D+G+ +D++ + P
Sbjct: 281 RRRLYFMAGNPSPDLDGSIRPGDNLYTNSLISVDLDTGKYVCHFQYIAHDVWDLDAVSP- 339
Query: 255 NPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDIIWFKLA 312
A ++ G+ D V+ K+G + DRD+ +I F A
Sbjct: 340 ----------------AVLVKVADKGGKTIDGVLHGGKTGHIYVHDRDTCGLIRFSEA 381
>gi|403068342|ref|ZP_10909674.1| quinoprotein ethanol dehydrogenase [Oceanobacillus sp. Ndiop]
Length = 773
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 95/342 (27%), Positives = 150/342 (43%), Gaps = 69/342 (20%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRW--SFYAGKDI----SATPAVANGVVYFP 54
WL +GG+L+N+RY+ + IN V +L+ W + +G D A+P V +GV+Y
Sbjct: 104 WLTNGGNLSNQRYSPLD-QINTSNVGDLKGEWVANLGSGFDFKYSGEASPVVYDGVMYVI 162
Query: 55 SWNGYLYAVNAFNGALIWEQN---LSKLTGLS----------GTGIV-VNVTVAVVVAVS 100
+ + A++A G IWE KLT + G G+V V + A +VA+
Sbjct: 163 TGANDVLALDAVTGETIWEYRPHITDKLTTVCCGWTSRGVAVGEGLVFVGLLDARLVALD 222
Query: 101 RSNGELVWSTQIDP-RPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDV 159
++ GE+VW T +D R IT + Y G Y G+S E + RG L D
Sbjct: 223 QTTGEVVWETVVDDWRKGYTITNAPLYYNGKVYTGVSGGEYGI--------RGRLTAFDA 274
Query: 160 RNGRIIWQTYMLPDNGGKRGGYS------------GAAVWGSSPAIDVIRRQKQNNQTTK 207
GR +W+ +P G K G+ GA VW +PA+D +T
Sbjct: 275 EMGRELWRFNTIPGPGEK--GHETWPSDNKAWMSGGAPVW-QTPAVD--PELGLMYFSTG 329
Query: 208 PTHPDQCISS----DIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPN 263
T PD SS ++Y++S++ALD ++G W +DI+
Sbjct: 330 NTAPDLDGSSREGDNLYSDSVIALDPETGEYKWHFQQVHHDIW----------------- 372
Query: 264 LDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGD 305
D D +L + +G R + K+G+ + DR +G+
Sbjct: 373 -DLDSPNPIILFDVEIDGEPRKGLGQAGKTGWIYFLDRTNGE 413
>gi|15838850|ref|NP_299538.1| polyvinylalcohol dehydrogenase [Xylella fastidiosa 9a5c]
gi|9107415|gb|AAF85058.1|AE004038_7 polyvinylalcohol dehydrogenase [Xylella fastidiosa 9a5c]
Length = 524
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 68/294 (23%), Positives = 125/294 (42%), Gaps = 58/294 (19%)
Query: 30 LRWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG------LS 83
++WS + A+ + N +Y S NG L ++ G+L+W LS TG L
Sbjct: 1 MQWSLSTQGGLPASSTIDNHSLYVSSSNGTLNKIDTQTGSLLWSIPLSNYTGNPHSLSLK 60
Query: 84 GTGIVVNVTVA------VVVAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSS 137
T I V ++A+++++G L+W T I+P ++IT ++Y YVG+SS
Sbjct: 61 STAIAPQSIVVGDQNSGTLLALNKTSGTLLWKTTIEPNLNAKITSPPTIYEDRVYVGVSS 120
Query: 138 LEEALPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYSGAAVWGS---SPAID 194
+ + ++A LD++ G+ +WQ+ +P+ GA + G +P+
Sbjct: 121 GKS----------QSNIAALDLKTGQPLWQSNSVPN---------GALINGPLTINPSKK 161
Query: 195 VIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPN 254
+ N+ P H + ++++ LD+ +G + + L
Sbjct: 162 RLYALTSNSGQASPLHN--------HTDTLLVLDMKNGALLLKQSL-------------- 199
Query: 255 NPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDIIW 308
PN + +L T++ NG RDVV + G D ++G I+W
Sbjct: 200 --KESTDPNTENANKNGTILFTLNINGTTRDVVAIPEAQGHYQVLDANNGTILW 251
>gi|329901222|ref|ZP_08272747.1| Quino(hemo)protein alcohol dehydrogenase, PQQ-dependent
[Oxalobacteraceae bacterium IMCC9480]
gi|327549154|gb|EGF33746.1| Quino(hemo)protein alcohol dehydrogenase, PQQ-dependent
[Oxalobacteraceae bacterium IMCC9480]
Length = 574
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 80/362 (22%), Positives = 144/362 (39%), Gaps = 80/362 (22%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAG--KDISATPAVANGVVYFPSWNG 58
WL GD R+ Y IN V L+ ++ F + + P V NGV++ +
Sbjct: 63 WLQTNGDYGQTRF-YPSAQINTKNVATLKPKFVFQTAVVESMETAPVVVNGVMFLTTAYN 121
Query: 59 YLYAVNAFNGALIW--EQNLSKLT-----------GLSGTGIVVNVTVAVVVAVSRSNGE 105
++YA++A G W + + +T +SG + + A +VA+ G+
Sbjct: 122 HVYAIDAITGVEYWHFKHKMGPVTTFCCGPNNKGVAVSGGKVFMGTLDAKMVALDAKTGK 181
Query: 106 LVWSTQI-DPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRI 164
L+W T+I DP TM+ V G +G + E + RG + D +G++
Sbjct: 182 LLWETEIADPEKGYSETMAPVVVDGKVLIGTNGGEYGI--------RGFVKAFDAESGKL 233
Query: 165 IWQTYMLPDNG--------------------GKRGGYS---------GAAVWGSSPAIDV 195
+W +P+ G ++ ++ G VW +P+ID
Sbjct: 234 VWTFNTIPEKGHEGVWATKDATGRDMHRDIPAEKAAFAKKSDFYNTLGGGVW-MAPSID- 291
Query: 196 IRRQKQNNQTTKPTHPD----QCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCL 251
R K PD + ++Y +S+VA+D+D+G+ W +D++ +
Sbjct: 292 -RATKTAFFVVGNPSPDLYGAERPGDNLYTDSMVAIDLDTGKYKWHYQYIAHDVWDLDAV 350
Query: 252 VPNNPDCPPGPNLDADFGEAPMLLTIS-TNGRFRDVVVAVQKSGFAWAFDRDSGDIIWFK 310
P P+L+ + NG+ V+ K+G + DR +G++I F
Sbjct: 351 SP------------------PILVDVKDKNGKMIPGVIHGGKTGHVYVHDRSNGELIRFS 392
Query: 311 LA 312
A
Sbjct: 393 EA 394
>gi|91777718|ref|YP_552926.1| putative quinoprotein alcohol dehydrogenase [Burkholderia
xenovorans LB400]
gi|91690378|gb|ABE33576.1| Putative quinoprotein alcohol dehydrogenase [Burkholderia
xenovorans LB400]
Length = 577
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 84/361 (23%), Positives = 143/361 (39%), Gaps = 77/361 (21%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAG--KDISATPAVANGVVYFPSWNG 58
WL G RY Y IN V LR + F + + P V+NGV++ +
Sbjct: 63 WLLSNGSYAQTRY-YRGAQINKTNVSKLRPAFIFQTAVNESMETAPIVSNGVMFITTSFN 121
Query: 59 YLYAVNAFNGALIW--EQNLSKLT-----------GLSGTGIVVNVTVAVVVAVSRSNGE 105
++YAV+A G W + + +T ++G + + A +VA+ G
Sbjct: 122 HVYAVDAVTGKEFWHYKHKMGAVTTFCCGPNNRGVAIAGDRLYMGTLDAKLVALDAKTGS 181
Query: 106 LVWSTQI-DPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRI 164
++W TQI DP TM+ +V G +G + E + RG L D +G++
Sbjct: 182 VLWQTQIADPDEGYSETMAPTVVDGKVLIGTNGGEYGI--------RGFLKAFDANSGQL 233
Query: 165 IWQTYMLPDNGGKRGGYSGAAVWGSSPAIDVIRRQKQNNQT------------------T 206
+W Y +P+ G + G ++ G D+ +KQ +
Sbjct: 234 LWTFYTIPETG-QEGVWATKDATGRDGKRDIDAEKKQLAEKGGDFYKTLGGGVWMAPAID 292
Query: 207 KPTH----------PDQCIS----SDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLV 252
+ TH PD + ++Y +S+VA+D+D+G+ W +D++ +
Sbjct: 293 RQTHTVFFVVGNPSPDLYGAIRPGDNLYTDSLVAIDLDTGKYKWHYQYVPHDVWDLDAVS 352
Query: 253 PNNPDCPPGPNLDADFGEAPMLLTI-STNGRFRDVVVAVQKSGFAWAFDRDSGDIIWFKL 311
P PML+ + NGR VV K+G + DR +G +I +
Sbjct: 353 P------------------PMLIDVRDNNGRMIPGVVHGGKTGHVYVHDRATGRLIRYSQ 394
Query: 312 A 312
A
Sbjct: 395 A 395
>gi|330503594|ref|YP_004380463.1| methanol/ethanol family PQQ-dependent dehydrogenase [Pseudomonas
mendocina NK-01]
gi|328917880|gb|AEB58711.1| methanol/ethanol family PQQ-dependent dehydrogenase [Pseudomonas
mendocina NK-01]
Length = 722
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 87/350 (24%), Positives = 139/350 (39%), Gaps = 72/350 (20%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAGKD--ISATPAVANGVVYFPSWNG 58
W+ HG + +RY+ E IN V L L WS+ D + ATP V +GV+Y
Sbjct: 58 WMTHGRTYDEQRYSPLE-QINQQNVDKLGLAWSYKLDIDRGVEATPIVVDGVMYTTGPFS 116
Query: 59 YLYAVNAFNGALIWEQNLSKLTGLSGTGI--VVNVTVAV-------------VVAVSRSN 103
+YA++A NG L+W+ + +G VN VAV + A+
Sbjct: 117 VVYALDARNGKLLWKYDPKSDRNRAGEACCDAVNRGVAVWKGKVYVGVLDGRLEAIDAKT 176
Query: 104 GELVWS--TQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRN 161
G+ VWS T+ D IT + V G +G E + RG + D +
Sbjct: 177 GQRVWSVDTRADHNRSYTITGAPRVVNGKVVIGNGGAEFGV--------RGYVTAYDAES 228
Query: 162 GRIIWQTYMLP---------------------DNGGKRGGYSGAAVWGS---SPAIDVIR 197
G+ W+ Y +P D ++GG G W S P ++++
Sbjct: 229 GKQAWRFYTVPGDPKLPPEDKAMEIAAKTWHGDAFAEQGG--GGTAWDSFAFDPELNLLY 286
Query: 198 RQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPD 257
N P + +++ +SIVA+D D+G AW Y T
Sbjct: 287 IGVGNGSLWDPKWRSEAKGDNLFLSSIVAIDADTGEYAW---------HYQTT------- 330
Query: 258 CPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
PG D + +L + G+ R V++ K+GF + DR +G+++
Sbjct: 331 --PGDAWDFTATQHMILAELEIGGKERKVLMQAPKNGFFYVIDRATGELL 378
>gi|421602324|ref|ZP_16044947.1| quinoprotein ethanol dehydrogenase [Bradyrhizobium sp. CCGE-LA001]
gi|404265565|gb|EJZ30622.1| quinoprotein ethanol dehydrogenase [Bradyrhizobium sp. CCGE-LA001]
Length = 595
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 82/350 (23%), Positives = 141/350 (40%), Gaps = 71/350 (20%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAGK----------DISATPAVANGV 50
WL+H D +RY+ IN TV+ L + W+ G + TP V NG
Sbjct: 53 WLHHHRDYTAQRYS-PLSQINRNTVKGLHVAWTMALGGIEGGGIWSHGGLEGTPIVENGF 111
Query: 51 VYFPSWNGYLYAVNAF--NGALIWEQNLSK---------LTGLSGTG-------IVVNVT 92
+Y G +Y ++ NG L+W+ + G++ G ++ +
Sbjct: 112 MYVTDGWGSVYKIDLHGGNGNLVWKMDPKTDHDWAGAIACCGVNNRGAALWDNFVISHTL 171
Query: 93 VAVVVAVSRSNGELVWSTQI-DPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFR 151
+V ++ +G++ W ++ DP IT + + G++ E + R
Sbjct: 172 DGRLVVTNKDDGKIAWEREVADPDKGEVITGAPLIVKNMAITGVAGAEYGI--------R 223
Query: 152 GSLAKLDVRNGRIIWQTYMLPDNGG-------------KRGGYSGAAVWGSSPAIDVIRR 198
G +A D+++ + +W+TY +P G K GG S P +I
Sbjct: 224 GWVAATDLKSQKEVWRTYTIPAKGEPGNETWKDGHDAWKTGGGSTWVTGSYDPQTHLIYW 283
Query: 199 QKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDC 258
N + Q ++Y +S +ALD D+G+I W F T PN+P
Sbjct: 284 GVGNPGPDFDSEYRQ--GDNLYTDSTLALDPDTGKIKWH--------FQHT---PNDP-- 328
Query: 259 PPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDIIW 308
D D +L+ ++ NG+ R VV+ ++GF +A DR G +W
Sbjct: 329 -----FDYDSVAERVLVDLTFNGKTRKVVLEADRNGFGYALDRTDGSFLW 373
>gi|403236954|ref|ZP_10915540.1| Glucose dehydrogenase, PQQ-dependent [Bacillus sp. 10403023]
Length = 740
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 85/343 (24%), Positives = 148/343 (43%), Gaps = 71/343 (20%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRW--SFYAGKDI----SATPAVANGVVYFP 54
W+ +GG++ N RY+ + I V+ L+ W S +G + ATP V +GV++
Sbjct: 83 WITNGGNIFNGRYSPLDK-ITKSNVKGLKAEWVTSLGSGYEFKYSGEATPIVYDGVMFTI 141
Query: 55 SWNGYLYAVNAFNGALIWE------QNL--------SKLTGLSGTGIVVNVTVAVVVAVS 100
+ + A++A G LIWE NL S+ GL + V + A ++A+
Sbjct: 142 TGADDVQAIDAKTGELIWEYRPELAANLDTVCCGWTSRGVGLGDGRVYVGLLDARLIALD 201
Query: 101 RSNGELVWSTQIDPRPRS-QITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDV 159
+ GE++W T+++ + IT + Y G Y G++ E + RG +A D
Sbjct: 202 QKTGEIIWETKVEDWEKGYNITSAPLYYNGMVYTGVAGGEYGI--------RGFVAAFDA 253
Query: 160 RNGRIIWQTYML--PDNGG-----------KRGGYSGAAVWGSSPAID----VIRRQKQN 202
G +W+T+ + PD G KRG GAAVW +PAID ++ N
Sbjct: 254 EKGEQVWKTHTVPGPDEKGHDTWPKDTDAWKRG---GAAVW-QTPAIDPELGILYLSTGN 309
Query: 203 NQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGP 262
+ +++++S++ALD +G W +DI+
Sbjct: 310 PSADLDGSARE--GDNLFSDSVLALDAKTGEYKWHFQEVHHDIW---------------- 351
Query: 263 NLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGD 305
D D +L + +G+ R + K+G+ + DR +G+
Sbjct: 352 --DMDAPNPVVLFDVEMDGKKRKGIAQAGKTGWLYILDRTNGE 392
>gi|385203961|ref|ZP_10030831.1| glucose dehydrogenase [Burkholderia sp. Ch1-1]
gi|385183852|gb|EIF33126.1| glucose dehydrogenase [Burkholderia sp. Ch1-1]
Length = 577
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 82/361 (22%), Positives = 143/361 (39%), Gaps = 77/361 (21%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAG--KDISATPAVANGVVYFPSWNG 58
WL G RY Y IN V LR + F + + P V+NGV++ +
Sbjct: 63 WLLSNGSYAQTRY-YRGAQINKTNVSKLRPAFIFQTAVNESMETAPIVSNGVMFITTSFN 121
Query: 59 YLYAVNAFNGALIW--EQNLSKLT-----------GLSGTGIVVNVTVAVVVAVSRSNGE 105
++YAV+A G W + + +T ++G + + A +VA+ G
Sbjct: 122 HVYAVDAVTGKEFWHYKHKMGSVTTFCCGPNNRGVAIAGDRLYMGTLDAKLVALDAKTGS 181
Query: 106 LVWSTQI-DPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRI 164
++W TQI DP TM+ +V G +G + E + RG L D +G++
Sbjct: 182 VLWQTQIADPDEGYSETMAPTVVDGKVLIGTNGGEYGI--------RGFLKAFDANSGQL 233
Query: 165 IWQTYMLPDNGGKRGGYSGAAVWGSSPAIDVIRRQKQNNQT------------------T 206
+W Y +P+ G + G ++ G D+ ++Q +
Sbjct: 234 LWTFYTIPETG-QEGVWATKDATGRDEKRDIDAEKRQLAEKGGDFYKTLGGGVWMAPAID 292
Query: 207 KPTH----------PDQCIS----SDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLV 252
+ TH PD + ++Y +S+VA+D+D+G+ W +D++ +
Sbjct: 293 RQTHTVFFVVGNPSPDLYGAIRPGDNLYTDSLVAIDLDTGKYKWHYQYVPHDVWDLDAVS 352
Query: 253 PNNPDCPPGPNLDADFGEAPMLLTI-STNGRFRDVVVAVQKSGFAWAFDRDSGDIIWFKL 311
P PML+ + NG+ VV K+G + DR +G +I +
Sbjct: 353 P------------------PMLIDVRDNNGKMIPGVVHGGKTGHVYVHDRATGRLIRYSQ 394
Query: 312 A 312
A
Sbjct: 395 A 395
>gi|413965043|ref|ZP_11404269.1| putative quinoprotein alcohol dehydrogenase [Burkholderia sp. SJ98]
gi|413927717|gb|EKS67006.1| putative quinoprotein alcohol dehydrogenase [Burkholderia sp. SJ98]
Length = 580
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 83/358 (23%), Positives = 142/358 (39%), Gaps = 81/358 (22%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAG--KDISATPAVANGVVYFPSWNG 58
WL+ G RYA IN V L+ + F + + P V+NGV++ +
Sbjct: 66 WLHSNGSYAETRYAPA-TQINTSNVAKLKPAFIFQTAVMESMETAPIVSNGVMFLTTSYN 124
Query: 59 YLYAVNAFNGALIW--EQNLSKLT-----------GLSGTGIVVNVTVAVVVAVSRSNGE 105
++YA++A G W + + +T +SG + + + +VA+ G
Sbjct: 125 HVYAIDAVTGKEFWHYKHKMGPVTTFCCGPNNRGVAISGDRLFMGTLDSKLVALDAKTGN 184
Query: 106 LVWSTQI-DPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRI 164
++WSTQI DP TM+ V +G + E + RG + D +G++
Sbjct: 185 VLWSTQIADPEEGYSETMAPVVVEDKVLIGTNGGEYGI--------RGFVKAFDANSGQL 236
Query: 165 IWQTYMLPDNG--------------------------GKRGG----YSGAAVWGSSPAID 194
+W Y +PD G ++GG G VW +PAID
Sbjct: 237 LWTFYTIPDTGSEGVWAENDAVGRNMKRDIAAEKKTLAEKGGDFNKTLGGGVW-MAPAID 295
Query: 195 VIRRQKQNNQTTKPTHPDQCIS----SDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTC 250
R+ + PD + ++Y +S+VA+D+DSG+ W +D++
Sbjct: 296 --RKTRTVYFVVGNPSPDLYGAIRPGDNLYTDSLVAVDLDSGKYKWHFQYIAHDVW---- 349
Query: 251 LVPNNPDCPPGPNLDADFGEAPMLLTIS-TNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
D D P+L+ + NG+ ++ K+GF + DR G +I
Sbjct: 350 --------------DLDAASPPILIDVKDKNGQMIPGIIHGGKTGFVYVHDRRDGKLI 393
>gi|410452801|ref|ZP_11306764.1| quinoprotein ethanol dehydrogenase [Bacillus bataviensis LMG 21833]
gi|409933969|gb|EKN70887.1| quinoprotein ethanol dehydrogenase [Bacillus bataviensis LMG 21833]
Length = 743
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 85/340 (25%), Positives = 147/340 (43%), Gaps = 66/340 (19%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFY--AGKDI----SATPAVANGVVYFP 54
W+ +GG N+RY+ IN V+NL+ +W + +G++ A+P V NGV+Y
Sbjct: 99 WITNGGSTFNQRYSTLNE-INTTNVKNLKGKWVTHLGSGQEFKYSGEASPVVYNGVMYII 157
Query: 55 SWNGYLYAVNAFNGALIW--EQNLSKLTGLS----------GTGIV-VNVTVAVVVAVSR 101
+ + A++ G +W + + +LT + G G+V V + A +VA+ +
Sbjct: 158 TGADEVSALDVKTGKNLWIYKPEIDELTTVCCGWTSRGVAIGDGLVYVGLLDARIVALDQ 217
Query: 102 SNGELVWSTQIDPRPRS-QITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVR 160
G+ VWST +D + IT + Y G Y G+S + RG + D +
Sbjct: 218 KTGKEVWSTVVDDWKKGYTITSAPLYYNGKIYTGISGGDFGT--------RGRVTAFDAK 269
Query: 161 NGRIIWQTYMLPDNGG-------------KRGGYSGAAVWGSSPAIDVIRRQKQNNQTTK 207
+G+ +W+ Y +P G KRG GA VW +PA+D +
Sbjct: 270 SGKELWRFYTIPGPGETGHETWPSDNDSWKRG---GAPVW-QTPAVDPETGLLYFSTGNA 325
Query: 208 PTHPDQCISS--DIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLD 265
D I +++A SIVA+D ++G+ W +DI+ D
Sbjct: 326 APDLDGSIRKGDNLFAASIVAIDAETGKYKWHFQEVHHDIW------------------D 367
Query: 266 ADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGD 305
D +L + +G+ R + K+G+ + DR +G+
Sbjct: 368 LDAPNPVVLFDVELDGKMRKGLAQAGKTGWVYILDRTNGE 407
>gi|116622178|ref|YP_824334.1| pyrrolo-quinoline quinone [Candidatus Solibacter usitatus
Ellin6076]
gi|116225340|gb|ABJ84049.1| Pyrrolo-quinoline quinone [Candidatus Solibacter usitatus
Ellin6076]
Length = 545
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 81/337 (24%), Positives = 137/337 (40%), Gaps = 64/337 (18%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSF---------YAGKDISATPAVANGVV 51
W + GD + RR++ + IN TV L++ W + G I +TP + NG++
Sbjct: 46 WPTYNGDYSGRRFSELDQ-INQATVDLLKIEWMYRLNVGPQRGVGGPTIKSTPLLVNGIL 104
Query: 52 YFPSWNGYLYAVNAFNGALIWEQNLS----KLTGLSGTGIVVNVTVAV-----VVAVSRS 102
YF + +++AVNA G +W+ + L G G GI V ++V+
Sbjct: 105 YF-TIPDHIFAVNARTGEHLWQYDFEDKGGHLVGQRGVGIYGEWLYFVSPDGWFISVNAK 163
Query: 103 NGELVWSTQI-DPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRN 161
+G+ W +I D + + TM+ + VG+ RG L D
Sbjct: 164 DGKERWKKKIADEKLQYFTTMAPLIVKNHVLVGIGG--------DAMDVRGYLESRDPET 215
Query: 162 GRIIWQTYMLPDNGGKRGG----------YSGAAVW---GSSPAIDVIRRQKQNNQTTKP 208
G + W+ Y P+ G G + G W P ++++ N P
Sbjct: 216 GELQWRWYTTPEKMGDPGSETWPNLEAMHHGGGMTWLPGTYDPDLNLLYWGTGN---ANP 272
Query: 209 THPDQCIS-SDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDAD 267
Q ++++ SIVAL+ D+G++AW YF P D D
Sbjct: 273 VFAGQGRKGANLWTASIVALNPDTGKLAW----------YF--------QASPHDTHDWD 314
Query: 268 FGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSG 304
E P+LL + NG+ R ++ ++G+ + DR +G
Sbjct: 315 NVETPVLLDATINGQPRKLLAQAARAGWFFVLDRTNG 351
>gi|449300477|gb|EMC96489.1| hypothetical protein BAUCODRAFT_33851 [Baudoinia compniacensis UAMH
10762]
Length = 291
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 98/225 (43%), Gaps = 35/225 (15%)
Query: 8 LNNRRYAY-GEVLINPVTVRNLRLRWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAF 66
LNNR A+ EV N ++ R + SF G +SA PA+ + YFP+W+G A N
Sbjct: 61 LNNRFVAHNAEVSSNAISSLTQRCKISFEEG--VSAPPALLGDIAYFPTWSGAFVAYNYV 118
Query: 67 NGALIWEQNLSKLTGLSGTGIVVNVTV-------------------------AVVVAVSR 101
+W+ N++ G V ++ A++ A+
Sbjct: 119 TCQAVWQTNITAYLIEYGVPTVEQLSFIPVSSRTSPQIDQKQNVLYAGSLLHALLFAMDL 178
Query: 102 SNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLE---EALPADQCCTFRGSLA--K 156
+G ++ I+ P + IT S + Y G +VG SS E ++P CC F G+
Sbjct: 179 RSGTILGQIPINDHPLAIITQSPTFYNGKVFVGASSSEISVASIPGYPCCNFTGNFGAYT 238
Query: 157 LDVRNGRII--WQTYMLPDNGGKRGGYSGAAVWGSSPAIDVIRRQ 199
+ G W + + GG++GA+VWGS P+IDV R Q
Sbjct: 239 FNRSTGTFARDWLVNSIENVVIGPGGWAGASVWGSQPSIDVQRSQ 283
>gi|397781423|ref|YP_006545896.1| Quinoprotein ethanol dehydrogenase [Methanoculleus bourgensis MS2]
gi|396939925|emb|CCJ37180.1| Quinoprotein ethanol dehydrogenase [Methanoculleus bourgensis MS2]
Length = 815
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 89/341 (26%), Positives = 143/341 (41%), Gaps = 60/341 (17%)
Query: 7 DLNNRRYAYGEVLINPVTVRNLRLRWSFYAGKD-----ISATPAVANGVVYFPSWNGYLY 61
D N R A E I+ VR+L + W+F + S+ P + V+F Y
Sbjct: 72 DYENSR-ATTEASIDKDNVRDLSIAWTFNITANGTFGGASSNPIIMGDTVFFQDLYANTY 130
Query: 62 AVNAFNGALIWEQ--NLSKLTGLSGTGI-----VVNVTVAVVVAVSRSNGELVWSTQ-ID 113
A+N +G++ WE+ N + +TG +G + V + A++ S+GE +WSTQ I+
Sbjct: 131 ALNLADGSVKWEKIYNNTTVTGPNGPAVGWGKVFVAGDPFSIAALNVSSGEELWSTQLIN 190
Query: 114 PRPRSQ------ITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGS----LAKLDVRNGR 163
P + I + +VY Y +P +RG L LD G
Sbjct: 191 TTPLAGEVIGEGIDIQPTVYDNFVYT------STVPGRGDVFYRGGAVGYLYALDQETGT 244
Query: 164 IIWQTYMLPDNG---GKRGGYSGAAVWGSSPAID----VIRRQKQNNQ--TTKPTHPDQC 214
I W + D G SG W +PA+D ++ N P +P+
Sbjct: 245 IAWNLSTVDDPVSIWGNPDVNSGGGAW-YTPAVDTETGIVYWAIANPAPFAGTPEYPNGA 303
Query: 215 ISS--DIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAP 272
++Y N+++ALD +G +AW + +D+F D D AP
Sbjct: 304 SRPGPNLYTNTMMALDHATGDMAWFTQVLPHDLF------------------DHDLQIAP 345
Query: 273 MLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDIIWFKLAG 313
+L + +G+ + VV+ K G +AF+RDSG I+W G
Sbjct: 346 ILTDANVSGKDQKVVLGAGKMGRVYAFNRDSGAILWIADVG 386
>gi|172065173|ref|YP_001815885.1| methanol/ethanol family PQQ-dependent dehydrogenase [Burkholderia
ambifaria MC40-6]
gi|171997415|gb|ACB68332.1| PQQ-dependent dehydrogenase, methanol/ethanol family [Burkholderia
ambifaria MC40-6]
Length = 575
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 72/317 (22%), Positives = 123/317 (38%), Gaps = 54/317 (17%)
Query: 20 INPVTVRNLRLRWSFYAGKDI----SATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQN 75
I+P V+ L WS+ ++ ATP V ++ + +YA +A GA +W+
Sbjct: 70 IDPSNVKQLTQAWSYKFPAELKQGFEATPIVNGRYLFVTTPKDNVYAFDAATGAQLWKYE 129
Query: 76 ---------------LSKLTGLSGTGIVVNVTVAVVVAVSRSNGELVWSTQI-DPRPRSQ 119
+++ L G + V + V A+ G LVW Q+ +P
Sbjct: 130 PKLGAESFKTACCDVVNRGVALYGKNVYVAMLSGEVAALDAQTGALVWKKQMFEPGLGYA 189
Query: 120 ITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNGGKRG 179
+++ GA VG S E RG +A L +G ++W+ Y +P G K
Sbjct: 190 FSLAPLAIDGAIVVGSSGGEYGA--------RGFIAALSPNDGALLWKRYTIPGQGEKHA 241
Query: 180 --------GYSGAAVWGSSPAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDS 231
+ GA W + R P D ++Y++S++ALD +
Sbjct: 242 DTWPDGMQAHGGAPAWLTGTYDAATRTLYWGVGNPGPWLADLRPGDNLYSDSLLALDPKN 301
Query: 232 GRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQ 291
G + W +D + D D P+L TI G+ D ++
Sbjct: 302 GDLKWHYQYTKHDTW------------------DYDGVNTPVLATIKYKGKEHDAIIHAD 343
Query: 292 KSGFAWAFDRDSGDIIW 308
++G+ A DRD+G +I+
Sbjct: 344 RNGYFHAIDRDTGKLIY 360
>gi|115360903|ref|YP_778040.1| Pyrrolo-quinoline quinone [Burkholderia ambifaria AMMD]
gi|115286231|gb|ABI91706.1| Pyrrolo-quinoline quinone [Burkholderia ambifaria AMMD]
Length = 575
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 72/317 (22%), Positives = 122/317 (38%), Gaps = 54/317 (17%)
Query: 20 INPVTVRNLRLRWSF----YAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQN 75
I+P V+ L WS+ + ATP V ++ + +YA +A GA +W+
Sbjct: 70 IDPSNVKQLTQAWSYKFPAQLKQGFEATPIVNGRYLFVTTPKDNVYAFDAATGAQLWKYE 129
Query: 76 ---------------LSKLTGLSGTGIVVNVTVAVVVAVSRSNGELVWSTQI-DPRPRSQ 119
+++ L G + V + V A+ G LVW Q+ +P
Sbjct: 130 PKLGAESFKTACCDVVNRGVALYGKNVYVAMLSGEVAALDAQTGALVWKKQMFEPGLGYS 189
Query: 120 ITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNGGKRG 179
+++ GA VG S E RG +A L +G ++W+ Y +P G K
Sbjct: 190 FSLAPLAIDGAIVVGSSGGEYGA--------RGFIAALSPNDGALLWKRYTIPGQGEKHA 241
Query: 180 --------GYSGAAVWGSSPAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDS 231
+ GA W + R P D ++Y++S++ALD +
Sbjct: 242 DTWPDGMQAHGGAPAWLTGTYDAATRTLYWGVGNPGPWLADLRPGDNLYSDSLLALDPKN 301
Query: 232 GRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQ 291
G + W +D + D D P+L TI G+ D ++
Sbjct: 302 GDLKWHYQYTKHDTW------------------DYDGVNTPVLATIKYKGKEHDAIIHAD 343
Query: 292 KSGFAWAFDRDSGDIIW 308
++G+ A DRD+G +I+
Sbjct: 344 RNGYFHAIDRDTGKLIY 360
>gi|118470090|ref|YP_888026.1| alcohol dehydrogenase [Mycobacterium smegmatis str. MC2 155]
gi|399988047|ref|YP_006568396.1| PQQ-dependent dehydrogenase [Mycobacterium smegmatis str. MC2 155]
gi|441210511|ref|ZP_20974662.1| putative quinoprotein ethanol dehydrogenase [Mycobacterium
smegmatis MKD8]
gi|118171377|gb|ABK72273.1| alcohol dehydrogenase [Mycobacterium smegmatis str. MC2 155]
gi|399232608|gb|AFP40101.1| PQQ-dependent dehydrogenase, methanol/ethanol family [Mycobacterium
smegmatis str. MC2 155]
gi|440626803|gb|ELQ88630.1| putative quinoprotein ethanol dehydrogenase [Mycobacterium
smegmatis MKD8]
Length = 561
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 73/335 (21%), Positives = 132/335 (39%), Gaps = 59/335 (17%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAGKD----------ISATPAVANGV 50
WL + G + +RY+ + IN V+ + W F AG A P V +GV
Sbjct: 46 WLTYYGAYDGKRYSLLD-QINTENVKRIGPAWVFQAGASGHMAGASTYAFEACPLVVDGV 104
Query: 51 VYFPSWNGYLYAVNAFNGALIWEQ-------------NLSKLTGLSGTGIVVNVTVAVVV 97
+Y W+G+ +A++A G +W N+++ ++ + A ++
Sbjct: 105 MYVTGWDGWFWALDAKTGQQLWRYKHAVPFDVSLCCGNVNRGCAVADGKVFFVTPNAHLL 164
Query: 98 AVSRSNGELVWSTQI-DPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAK 156
A+ SNGE+VW I D R +++ V G + E + RG +
Sbjct: 165 ALDASNGEMVWEKTIGDVRAGESASLAPLVVKNTLITGSAGGEFGV--------RGHIDC 216
Query: 157 LDVRNGRIIWQTYMLPDNGGKRGGYSGAAVWGSSPAIDVIRRQKQNNQTTKPTHPDQCI- 215
D++ G +W+TY +P + G G+ W + + +R N+ T P+ +
Sbjct: 217 WDLKTGEHLWRTYTVP-----KPGEPGSETWPADG--EAWQRGGANHWVTGTYDPELNLY 269
Query: 216 -----------------SSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDC 258
++Y +S+VALD+D+G I W +D++ + +
Sbjct: 270 YAGTGNPAPDFDGAVREGDNLYTDSVVALDVDTGEIKWHYQFTPHDLWDYDSTMEMTLFE 329
Query: 259 PPGPNLDADFGEAPMLLTIS-TNGRFRDVVVAVQK 292
G L F + + TNG + V V +
Sbjct: 330 RDGKKLLGHFDKNGYFFVLDRTNGELQHVTPFVDR 364
>gi|421480349|ref|ZP_15927977.1| putative quinoprotein decanol dehydrogenase [Burkholderia
multivorans CF2]
gi|400221233|gb|EJO51710.1| putative quinoprotein decanol dehydrogenase [Burkholderia
multivorans CF2]
Length = 575
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 73/317 (23%), Positives = 124/317 (39%), Gaps = 54/317 (17%)
Query: 20 INPVTVRNLRLRWSFYAGKDI----SATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQN 75
I+ V L WS+ ++ ATP V ++ + +YA +A GA +W+
Sbjct: 70 IDASNVGRLTQAWSYKFPAELKQGFEATPIVNGRYLFVTTPKDNVYAFDAATGAQLWKYE 129
Query: 76 ---------------LSKLTGLSGTGIVVNVTVAVVVAVSRSNGELVWSTQI-DPRPRSQ 119
+++ L G + V + V A+ G LVW Q+ +P
Sbjct: 130 PKLGAESFKTACCDVVNRGVALYGKNVYVAMLSGEVAALDAQTGTLVWKKQMFEPGLGYA 189
Query: 120 ITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNGGKRG 179
+++ GA VG S E RG +A L+ +G ++W+ + +P G K G
Sbjct: 190 FSLAPLALDGAIVVGSSGGEYGA--------RGFIAALNANDGSLLWKRFTIPGQGEKHG 241
Query: 180 G--------YSGAAVWGSSPAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDS 231
+ GA W + R P D ++Y++S++ALD +
Sbjct: 242 DTWPDGMQTHGGAPAWLTGTYDAATRTLYWGVGNPGPWLADLRPGDNLYSDSLLALDPKN 301
Query: 232 GRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQ 291
G + W +D + D D P+L TI G+ RD ++
Sbjct: 302 GDLKWHYQYTKHDTW------------------DYDGVNTPILATIRYKGQARDAIIHAD 343
Query: 292 KSGFAWAFDRDSGDIIW 308
++GF A DRD+G +I+
Sbjct: 344 RNGFFHAIDRDTGKLIY 360
>gi|161522993|ref|YP_001585922.1| methanol/ethanol family PQQ-dependent dehydrogenase [Burkholderia
multivorans ATCC 17616]
gi|189348178|ref|YP_001941374.1| putative glucose dehydrogenase [Burkholderia multivorans ATCC
17616]
gi|221212015|ref|ZP_03584993.1| pyrrolo-quinoline quinone [Burkholderia multivorans CGD1]
gi|421468212|ref|ZP_15916772.1| putative quinoprotein decanol dehydrogenase [Burkholderia
multivorans ATCC BAA-247]
gi|160346546|gb|ABX19630.1| PQQ-dependent dehydrogenase, methanol/ethanol family [Burkholderia
multivorans ATCC 17616]
gi|189338316|dbj|BAG47384.1| putative glucose dehydrogenase [Burkholderia multivorans ATCC
17616]
gi|221168100|gb|EEE00569.1| pyrrolo-quinoline quinone [Burkholderia multivorans CGD1]
gi|400232407|gb|EJO62027.1| putative quinoprotein decanol dehydrogenase [Burkholderia
multivorans ATCC BAA-247]
Length = 575
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 73/317 (23%), Positives = 124/317 (39%), Gaps = 54/317 (17%)
Query: 20 INPVTVRNLRLRWSFYAGKDI----SATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQN 75
I+ V L WS+ ++ ATP V ++ + +YA +A GA +W+
Sbjct: 70 IDASNVGRLTQAWSYKFPAELKQGFEATPIVNGRYLFVTTPKDNVYAFDAATGAQLWKYE 129
Query: 76 ---------------LSKLTGLSGTGIVVNVTVAVVVAVSRSNGELVWSTQI-DPRPRSQ 119
+++ L G + V + V A+ G LVW Q+ +P
Sbjct: 130 PKLGAESFKTACCDVVNRGVALYGKNVYVAMLSGEVAALDAQTGTLVWKKQMFEPGLGYA 189
Query: 120 ITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNGGKRG 179
+++ GA VG S E RG +A L+ +G ++W+ + +P G K G
Sbjct: 190 FSLAPLALDGAIVVGSSGGEYGA--------RGFIAALNANDGSLLWKRFTIPGQGEKHG 241
Query: 180 G--------YSGAAVWGSSPAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDS 231
+ GA W + R P D ++Y++S++ALD +
Sbjct: 242 DTWPDGMQTHGGAPAWLTGTYDAATRTLYWGVGNPGPWLADLRPGDNLYSDSLLALDPKN 301
Query: 232 GRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQ 291
G + W +D + D D P+L TI G+ RD ++
Sbjct: 302 GDLKWHYQYTKHDTW------------------DYDGVNTPILATIRYKGQARDAIIHAD 343
Query: 292 KSGFAWAFDRDSGDIIW 308
++GF A DRD+G +I+
Sbjct: 344 RNGFFHAIDRDTGKLIY 360
>gi|167041661|gb|ABZ06406.1| putative PQQ enzyme repeat protein [uncultured marine microorganism
HF4000_009L19]
Length = 547
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 81/333 (24%), Positives = 139/333 (41%), Gaps = 53/333 (15%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAG--KDISATPAVANGVVYFPSWNG 58
WL + G ++R++ + I P V +L LRW F A + ATP V +G++Y
Sbjct: 38 WLTYSGSYKSQRHSQLDQ-ITPANVTDLELRWVFQARSLEVFQATPLVVDGIMYLVEPTN 96
Query: 59 YLYAVNAFNGALIWEQNLSKLTGLSGTGIVVNVTVAVV-------------VAVSRSNGE 105
+ A++A G + W + VN +AV+ VA+ ++G+
Sbjct: 97 TVVALDAKLGRVFWTYEYTPSRAARPCCGAVNRGLAVLDNTLFLATIDANLVALDATSGK 156
Query: 106 LVWSTQI-DPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRI 164
+W T + DP +T++ V VG++ E + RG +A D + G
Sbjct: 157 PLWKTNVGDPAAGYALTLAPLVIKDKVVVGIAGGEYGI--------RGFIAAYDAQTGEE 208
Query: 165 IWQTYMLPDNG--------GKRGGYSGAAVWGSSPAIDVIRRQKQNNQTTKPT-HPDQCI 215
W+ Y +P G G + GA VW + + P +P Q
Sbjct: 209 AWKFYTIPGPGEPGHETWQGDDWEHGGAPVWLTGSYDPDLNLTYWGIGNPGPDWNPSQRP 268
Query: 216 SSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLL 275
++Y++S+VAL+ D+G + W F FT PN+P D D + P+L+
Sbjct: 269 GDNLYSDSVVALNADTGELEW--------YFQFT---PNDP-------YDFDSVQIPVLI 310
Query: 276 TISTN-GRFRDVVVAVQKSGFAWAFDRDSGDII 307
G +++ ++GF + DR+SG +
Sbjct: 311 DAPDGAGGTLKLMLWGNRNGFFYVLDRESGRFL 343
>gi|116621231|ref|YP_823387.1| pyrrolo-quinoline quinone [Candidatus Solibacter usitatus
Ellin6076]
gi|116224393|gb|ABJ83102.1| Pyrrolo-quinoline quinone [Candidatus Solibacter usitatus
Ellin6076]
Length = 510
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 77/332 (23%), Positives = 139/332 (41%), Gaps = 58/332 (17%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAGKDISATPAVANGVVYFPSWNGYL 60
WL + GD R++ I P + L+ W F + + + A+P VANG++Y + + L
Sbjct: 36 WLTYHGDYTGERHSKLSE-ITPENISKLKQVWKFQSSQQLKASPIVANGMIYITAPDN-L 93
Query: 61 YAVNAFNGALIWEQNLSK----LTGLSGTGIVVNVTVAV-----VVAVSRSNGELVWSTQ 111
+A++A +G +W +K G G I + ++A++ NGE+ W
Sbjct: 94 WAIDAHSGKEVWHHQHTKNNAFHIGHRGAAIYKDTVYLTTPDCHLLALNSRNGEVKWDVL 153
Query: 112 I-DPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYM 170
I D T + + VG++ + LP G+L D G+ W Y
Sbjct: 154 IADSAKGFWSTNAPLIIRNHVIVGVAGDFDNLP--------GTLRSFDADTGKPQWTFYS 205
Query: 171 LPDNGG---KRGGYSGAAVWGS---SPAIDVIRRQKQN-----NQTTKP-THPDQCISSD 218
P GG +G +W + P ++++ N N + +P +P C
Sbjct: 206 TPPPSAGDTSSGGATGGQMWNTGTYDPDLNLMFVGTGNPTPVLNGSVRPGDNPWTC---- 261
Query: 219 IYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTIS 278
SIVAL+ D+G++AW + +D D D E P+L+ +
Sbjct: 262 ----SIVALNPDTGKLAWGFQVSPHDTH------------------DWDAAEVPVLVDGN 299
Query: 279 TNGRFRDVVVAVQKSGFAWAFDRDSGDIIWFK 310
+G+ R +++ ++G+ + DR +G + K
Sbjct: 300 FDGQPRKMLLQASRNGYFFVIDRTNGKSLLTK 331
>gi|116623665|ref|YP_825821.1| pyrrolo-quinoline quinone [Candidatus Solibacter usitatus
Ellin6076]
gi|116226827|gb|ABJ85536.1| Pyrrolo-quinoline quinone [Candidatus Solibacter usitatus
Ellin6076]
Length = 520
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 79/333 (23%), Positives = 133/333 (39%), Gaps = 56/333 (16%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAGKDISATPAVANGVVYFPSWNGYL 60
WL + G+L RY+ V + P NLR++W++ +P V +GV+Y N
Sbjct: 32 WLTYSGNLQGHRYS-PLVELTPANAGNLRVKWAYQLESRGEVSPIVVDGVMYITGPN-TA 89
Query: 61 YAVNAFNGALIWE---------QNL-----SKLTGLSGTGIVVNVTVAVVVAVSRSNGEL 106
A++A G +W QN+ ++ + I V +VA+ +G+
Sbjct: 90 AALDARTGRRLWSWSRPIPKDYQNIGFGRVNRGPAILDDLIFVATLDCYLVALDARSGQE 149
Query: 107 VWSTQI-DPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRII 165
WS+Q+ D +P +T++ G VG+S E + RG + D + G
Sbjct: 150 RWSSQVADYKPGYSMTLAPLAIRGKVLVGVSGGETGI--------RGFVDAYDAKTGARA 201
Query: 166 WQTYMLPDNGG-----------KRGGYSGAAVWGSSPAIDVIRRQKQNNQTTKPTHPDQC 214
W+ + +P G + GG S P +++ N +PD
Sbjct: 202 WRFHTIPGPGEPGNDTWPGDSWRTGGGSTWVTGAYDPETNLVYWGIGNPGPD--WNPDSR 259
Query: 215 ISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPML 274
++Y S+VALD D+G++ W F FT P + D D P+L
Sbjct: 260 RGDNLYTCSLVALDGDTGKLKWH--------FQFT----------PNDSHDWDSTHVPVL 301
Query: 275 LTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
G R +V ++ F + DR SG+ +
Sbjct: 302 FDADVRGTRRKLVAVANRNAFYYVLDRGSGEFL 334
>gi|119899312|ref|YP_934525.1| putative quinoprotein ethanol dehydrogenase [Azoarcus sp. BH72]
gi|119671725|emb|CAL95638.1| putative quinoprotein ethanol dehydrogenase [Azoarcus sp. BH72]
Length = 724
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 85/350 (24%), Positives = 139/350 (39%), Gaps = 72/350 (20%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAGKD--ISATPAVANGVVYFPSWNG 58
WL+HG + +RY+ + IN V L L W+ D + ATP V +GV+Y
Sbjct: 42 WLSHGRGYDEKRYSPLKK-INDANVGKLGLAWTHKLDIDMGVEATPIVVDGVMYTTGPYS 100
Query: 59 YLYAVNAFNGALIWEQNLSKLTGLSGTGIV--VNVTVAV-------------VVAVSRSN 103
+YA++A +G L+W+ + ++G G VN VAV +VA+ ++
Sbjct: 101 IVYALDAVSGKLLWKHDPKVPKAMAGEGCCGPVNRGVAVWKGRVYVGTFDGRLVALDAAS 160
Query: 104 GELVWS--TQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRN 161
G+ +WS T +D IT + + G +G E + RG + D
Sbjct: 161 GKQLWSVDTVLDHAKSYTITGAPRIVKGKVLIGNGGAEFGV--------RGYVTAYDAET 212
Query: 162 GRIIWQTYMLP---------------------DNGGKRGGYSGAAVWGS---SPAIDVIR 197
G+ W+ + +P D K GG G VW S P ++ +
Sbjct: 213 GKQAWRFFTVPGDPKLPPEDDAMAMALKTWYGDGWIKWGG--GGTVWDSMSYDPELNQLY 270
Query: 198 RQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPD 257
N + +++ +S+VALD D+G+ W Y T
Sbjct: 271 IGVGNGSPFNYQFRSEGKGDNLFLSSVVALDPDTGKYIW---------HYQTT------- 314
Query: 258 CPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
P D + L I +G+ R V++ K+GF + DR +G +I
Sbjct: 315 --PADRWDFTAAQQMTLADIEIDGKVRKVLMQAPKNGFFYVLDRTNGQLI 362
>gi|134291943|ref|YP_001115712.1| Pyrrolo-quinoline quinone [Burkholderia vietnamiensis G4]
gi|387906688|ref|YP_006337025.1| Quino(hemo)protein alcohol dehydrogenase, PQQ-dependent
[Burkholderia sp. KJ006]
gi|134135132|gb|ABO59457.1| Pyrrolo-quinoline quinone [Burkholderia vietnamiensis G4]
gi|387581580|gb|AFJ90294.1| Quino(hemo)protein alcohol dehydrogenase, PQQ-dependent
[Burkholderia sp. KJ006]
Length = 575
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 72/317 (22%), Positives = 122/317 (38%), Gaps = 54/317 (17%)
Query: 20 INPVTVRNLRLRWSFYAGKDI----SATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQN 75
I+ V+ L WS+ ++ ATP V ++ + +YA +A GA +W+
Sbjct: 70 IDASNVKQLTQAWSYKFPAELKQGFEATPIVNGRYLFVTTPKDNVYAFDATTGAQLWKYE 129
Query: 76 ---------------LSKLTGLSGTGIVVNVTVAVVVAVSRSNGELVWSTQI-DPRPRSQ 119
+++ L G + V + V A+ G LVW Q+ +P
Sbjct: 130 PKLGAESFKTACCDVVNRGVALYGKNVYVAMLSGEVAALDAQTGALVWKKQMFEPGLGYA 189
Query: 120 ITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNGGKRG 179
+++ GA VG S E RG +A L +G ++W+ Y +P G K
Sbjct: 190 FSLAPLAIDGAIVVGSSGGEYGA--------RGFIAALSPNDGSVLWKRYTIPGQGEKHA 241
Query: 180 --------GYSGAAVWGSSPAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDS 231
+ GA W + R P D ++Y++S++ALD +
Sbjct: 242 DTWPDGMQAHGGAPAWLTGTYDAATRTLYWGVGNPGPWLADLRPGDNLYSDSLLALDPKN 301
Query: 232 GRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQ 291
G + W +D + D D P+L TI G+ D ++
Sbjct: 302 GDLKWHYQYTKHDTW------------------DYDGVNTPVLATIKYKGKEHDAIIHAD 343
Query: 292 KSGFAWAFDRDSGDIIW 308
++G+ A DRDSG +I+
Sbjct: 344 RNGYFHAIDRDSGKLIY 360
>gi|170703173|ref|ZP_02893983.1| PQQ-dependent dehydrogenase, methanol/ethanol family [Burkholderia
ambifaria IOP40-10]
gi|170131920|gb|EDT00438.1| PQQ-dependent dehydrogenase, methanol/ethanol family [Burkholderia
ambifaria IOP40-10]
Length = 575
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/317 (22%), Positives = 123/317 (38%), Gaps = 54/317 (17%)
Query: 20 INPVTVRNLRLRWSFYAGKDI----SATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQN 75
I+P V+ L WS+ ++ ATP V ++ + +YA +A GA +W+
Sbjct: 70 IDPSNVKQLTQAWSYKFPAELKQGFEATPIVNGRYLFVTTPKDNVYAFDAATGAQLWKYE 129
Query: 76 ---------------LSKLTGLSGTGIVVNVTVAVVVAVSRSNGELVWSTQI-DPRPRSQ 119
+++ L G + V + V A+ G LVW Q+ +P
Sbjct: 130 PKLGAESFKTACCDVVNRGVALYGKNVYVAMLSGEVAALDAQTGALVWKKQMFEPGLGYA 189
Query: 120 ITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNGGKRG 179
+++ GA VG S E RG +A L +G ++W+ + +P G K
Sbjct: 190 FSLAPLAIDGAIVVGSSGGEYGA--------RGFIAALSPTDGALLWKRFTIPGQGEKHA 241
Query: 180 --------GYSGAAVWGSSPAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDS 231
+ GA W + R P D ++Y++S++ALD +
Sbjct: 242 DTWPDGMQAHGGAPAWLTGTYDAATRTLYWGVGNPGPWLADLRPGDNLYSDSLLALDPKN 301
Query: 232 GRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQ 291
G + W +D + D D P+L TI G+ D ++
Sbjct: 302 GDLKWHYQYTKHDTW------------------DYDGVNTPVLATIKYKGKEHDAIIHAD 343
Query: 292 KSGFAWAFDRDSGDIIW 308
++G+ A DRD+G +I+
Sbjct: 344 RNGYFHAIDRDTGKLIY 360
>gi|416904363|ref|ZP_11930657.1| methanol/ethanol family PQQ-dependent dehydrogenase [Burkholderia
sp. TJI49]
gi|325529445|gb|EGD06363.1| methanol/ethanol family PQQ-dependent dehydrogenase [Burkholderia
sp. TJI49]
Length = 575
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 72/317 (22%), Positives = 124/317 (39%), Gaps = 54/317 (17%)
Query: 20 INPVTVRNLRLRWSFYAGKDI----SATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQN 75
I+P V L WS+ ++ ATP V ++ + +YA +A GA +W+
Sbjct: 70 IDPSNVNRLTQAWSYKFPAELKQGFEATPIVNGRYLFVTTPKDNVYAFDATTGAQLWKFE 129
Query: 76 ---------------LSKLTGLSGTGIVVNVTVAVVVAVSRSNGELVWSTQI-DPRPRSQ 119
+++ L G + V + VVA+ G LVW Q+ +P
Sbjct: 130 PKLGAESFKTACCDVVNRGVALYGKNVYVAMLSGEVVALDAQTGTLVWKKQMFEPGLGYA 189
Query: 120 ITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNGGKRG 179
+++ GA VG S E RG +A L +G ++W+ + +P G K
Sbjct: 190 FSLAPLALDGAIVVGSSGGEYGA--------RGFIAALSPNDGALLWKRFTIPGQGEKHA 241
Query: 180 --------GYSGAAVWGSSPAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDS 231
+ GA W + R P D ++Y++S++AL+ +
Sbjct: 242 DTWPDGMQAHGGAPAWLTGTYDAATRTLYWGVGNPGPWLADLRPGDNLYSDSLLALNPKN 301
Query: 232 GRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQ 291
G + W +D + D D P+L TI G+ RD ++
Sbjct: 302 GDLKWHYQYTKHDTW------------------DYDGVNTPILATIQYKGKSRDAILHAD 343
Query: 292 KSGFAWAFDRDSGDIIW 308
++G+ A DRD+G +I+
Sbjct: 344 RNGYFHAIDRDTGKLIY 360
>gi|299529131|ref|ZP_07042579.1| Pyrrolo-quinoline quinone [Comamonas testosteroni S44]
gi|298722887|gb|EFI63796.1| Pyrrolo-quinoline quinone [Comamonas testosteroni S44]
Length = 689
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 84/349 (24%), Positives = 135/349 (38%), Gaps = 69/349 (19%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFY--AGKDISATPAVANGVVYFPSWNG 58
W +HG + R++ + I+ V L L WS+ + + + ATP V NGV+Y +
Sbjct: 37 WPSHGLNYQENRFSPLK-QIHSGNVDQLGLAWSYKLDSSRGVEATPIVVNGVMYVSAPWS 95
Query: 59 YLYAVNAFNGALIW--EQNLSKLTGLSGTGIVVNVTVAV-------------VVAVSRSN 103
++AV+A G +W + + + G VVN VAV ++A+ +
Sbjct: 96 VVHAVDARTGKALWTYDPQVPREMAYKGCCDVVNRGVAVYKGKVFVAAFDGRLIALDAAT 155
Query: 104 GELVWSTQIDPRPRSQITMSGS--VYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRN 161
G+ VWST T++G+ V+ G Y+G E RG + D
Sbjct: 156 GQQVWSTDTIDNKNFSYTITGAPRVFKGKVYIGNGGAEYGA--------RGYVTAYDAET 207
Query: 162 GRIIWQTYMLPDNGGK----------------RGGY----SGAAVWGS---SPAIDVIRR 198
G+ +W+ Y +P + + G Y G VW S P +D +
Sbjct: 208 GKQVWRFYTVPGDPARAYESKALEEAAKTWDPAGRYWESGGGGTVWNSLVFDPELDQMYI 267
Query: 199 QKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDC 258
N ++Y SIVALD D+G W +
Sbjct: 268 GVGNGSPWAHRKRSPAGGDNLYLGSIVALDPDTGAYKW------------------HYQE 309
Query: 259 PPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
PG N D + + I +G+ R V++ K+G+ + DR SG I
Sbjct: 310 TPGDNWDFTSAQDIVQADIRIDGKLRKVLLHAPKNGYFFVIDRQSGKFI 358
>gi|124265556|ref|YP_001019560.1| alcohol dehydrogenase [Methylibium petroleiphilum PM1]
gi|124258331|gb|ABM93325.1| putative alcohol dehydrogenase precursor [Methylibium
petroleiphilum PM1]
Length = 572
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 79/329 (24%), Positives = 134/329 (40%), Gaps = 50/329 (15%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAG--KDISATPAVANGVVYFPSWNG 58
WL + G+ Y+ E IN V L L WS+ G + + P V NG +Y + N
Sbjct: 42 WLMYRGNYAGWGYSPLEK-INDKNVSKLTLAWSYVTGMSEGHQSPPIVNNGYMYVTTPNN 100
Query: 59 YLYAVNAFNGALIWE------QNLSKL------TGLSGTGIVVNVTVAVVVAVSRSNGEL 106
+ A A +G +W + L +L L + + T A++VA+ G+
Sbjct: 101 QVIAFEAKSGKELWRYKKQIPEELQQLHPTNRGVALYNDKLYLATTDAMLVALDPVTGKE 160
Query: 107 VWSTQI-DPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRII 165
+W + + D + T++ V G G+S E + RG + LD G+
Sbjct: 161 LWKSSVGDWKAGYYSTLAPLVANGKVVTGVSGGEYGV--------RGYVIALDAETGKEA 212
Query: 166 WQTYMLPDNG--------GKRGGYSGAAVWGSSPAIDVIRRQKQNNQTTKPTHPDQCISS 217
W+TY +P G G+ G +VW + + P D
Sbjct: 213 WRTYTIPAPGEPGGDTWPGETYKKGGGSVWITGTYDPETKLSYWGTGNAAPWMGDTRAGD 272
Query: 218 DIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTI 277
++Y+ S++ALDI++G+ L GY +++ D D AP+L+ +
Sbjct: 273 NLYSTSVIALDIETGK------LKGYHQYHWN------------DTWDWDEVSAPLLVDV 314
Query: 278 STNGRFRDVVVAVQKSGFAWAFDRDSGDI 306
NG+ +V ++G+ W +R SG I
Sbjct: 315 DRNGKKVKSLVHAGRNGYLWQLERTSGPI 343
>gi|410631159|ref|ZP_11341840.1| alcohol dehydrogenase [cytochrome c] [Glaciecola arctica BSs20135]
gi|410149361|dbj|GAC18707.1| alcohol dehydrogenase [cytochrome c] [Glaciecola arctica BSs20135]
Length = 716
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 83/352 (23%), Positives = 146/352 (41%), Gaps = 78/352 (22%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSF--YAGKDISATPAVANGVVYFPSWNG 58
WL+HG +RY+ + I+ V L L W+F + + ATP V +G++YF
Sbjct: 62 WLSHGRTYKEQRYSPLK-QISLENVDQLGLSWAFDLEGTRGLEATPIVVDGIMYFTGTWS 120
Query: 59 YLYAVNAFNGALIWEQN---------------LSKLTGLSGTGIVVNVTVAVVVAVSRSN 103
+YA+NA G L+W+ + +++ + G + + ++A++ N
Sbjct: 121 RVYALNALTGELLWKYDPKVPPEWAVHLCCDVVNRGVAVWGNQVYLGTLDGRLLAINAKN 180
Query: 104 GELVWSTQIDP--RPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRN 161
G LVW + P P S IT + V G +G E + RG ++ D ++
Sbjct: 181 GALVWEVKTTPDDMPYS-ITGAPRVVKGNVIIGNGGGEFGV--------RGYVSAYDAKS 231
Query: 162 GRIIWQTYMLPDNGGK--------------RGGY----SGAAVWGS---SPAIDVI---- 196
G+ W+ + +P + K +G + G VW S P +D++
Sbjct: 232 GQQKWRFFTVPGDPAKPFEDPILEMAAKTWKGEWWKLGGGGTVWDSMSYDPELDLLYIGV 291
Query: 197 -RRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNN 255
N Q P D +++ +SIVA+ D+G+ W Y T
Sbjct: 292 GNGSPWNQQVRSPGGGD-----NLFLSSIVAVKPDTGKYVW---------HYQTT----- 332
Query: 256 PDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
PG + D + +L + G+ R V++ K+GF + DR++G+ I
Sbjct: 333 ----PGESWDYTAAQQMVLAELEIEGKTRKVIMQAPKNGFFYVLDRETGEFI 380
>gi|171322672|ref|ZP_02911432.1| PQQ-dependent dehydrogenase, methanol/ethanol family [Burkholderia
ambifaria MEX-5]
gi|171091986|gb|EDT37436.1| PQQ-dependent dehydrogenase, methanol/ethanol family [Burkholderia
ambifaria MEX-5]
Length = 575
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/317 (23%), Positives = 125/317 (39%), Gaps = 54/317 (17%)
Query: 20 INPVTVRNLRLRWSFYAGKDI----SATPAVANGVVYFPSWNGYLYAVNAFNGALIW--E 73
I+P V+ L WS+ ++ ATP V ++ + +YA +A GA +W E
Sbjct: 70 IDPSNVKQLTQAWSYKFPAELKQGFEATPIVNGRYLFVTTPKDNVYAFDAATGAQLWKYE 129
Query: 74 QNLSKLTGLSGTGIVVNVTVAV-------------VVAVSRSNGELVWSTQI-DPRPRSQ 119
L ++ + VVN VA+ V A+ G LVW Q+ +P
Sbjct: 130 PKLGAVSFKTACCDVVNRGVALYGKNVYVAMLSGEVAALDAQTGALVWKKQMFEPGLGYA 189
Query: 120 ITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNGGKRG 179
+++ GA VG + E RG +A L +G ++W+ + +P G K
Sbjct: 190 FSLAPLAIDGAIVVGSAGGEYGA--------RGFIAALSPNDGTLLWKRFTIPGQGEKHA 241
Query: 180 --------GYSGAAVWGSSPAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDS 231
+ GA W + R P D ++Y++S++ALD +
Sbjct: 242 DTWPDGMQAHGGAPAWLTGTYDAATRTLYWGVGNPGPWLADLRPGDNLYSDSLLALDPKN 301
Query: 232 GRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQ 291
G + W +D + D D P+L TI G+ D ++
Sbjct: 302 GDLKWHYQYTKHDTW------------------DYDGVNTPVLATIKYKGKEHDAIIHAD 343
Query: 292 KSGFAWAFDRDSGDIIW 308
++G+ A DRD+G +I+
Sbjct: 344 RNGYFHAIDRDTGKLIY 360
>gi|365881192|ref|ZP_09420517.1| putative Quinoprotein ethanol dehydrogenase [Bradyrhizobium sp. ORS
375]
gi|365290643|emb|CCD93048.1| putative Quinoprotein ethanol dehydrogenase [Bradyrhizobium sp. ORS
375]
Length = 592
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 82/356 (23%), Positives = 150/356 (42%), Gaps = 82/356 (23%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAGK----------DISATPAVANGV 50
WL+H + + R++ + IN TV+NL++ W+ + G + TP V NG+
Sbjct: 49 WLHHHKNYSGTRFSTLKE-INKDTVKNLKVAWTMHLGGVEGGGIWSHGGLEGTPIVENGM 107
Query: 51 VYFPSWNGYLYAVNAF--NGALIWEQNL----------------SKLTGLSGTGIVVNVT 92
+Y G +Y ++A G L+W+ + ++ L G +V +
Sbjct: 108 IYVTDGWGSVYKIDARGGKGQLVWKMDPKTDHDWAGAIACCGVDNRGVALWGNLVVSHTL 167
Query: 93 VAVVVAVSRSNGELVWSTQI-DPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFR 151
++A ++ G++ W Q+ DP IT + + G++ E + R
Sbjct: 168 DGRLIATNKETGQVAWQRQVADPDKGEVITGAPLIVKNMAISGVAGAEYGI--------R 219
Query: 152 GSLAKLDVRNGRIIWQTYMLPDNGG------KRGGYSGAAVWGSS-------PAIDVIRR 198
G +A D+ + +W+T+ +P G K + AA GS+ PA D I
Sbjct: 220 GWIAATDLGTQKEVWRTHTIPAKGEPGSETWKDSNDAAAAGGGSTWVTGTYDPATDTIIW 279
Query: 199 QKQN-----NQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVP 253
N + +P ++Y +S +ALD ++G+I W + T P
Sbjct: 280 GVGNPGPDWDNAYRP-------GDNLYTDSSLALDANTGKIKWH--------YQHT---P 321
Query: 254 NNPDCPPGPNLDADFGEAPMLLTIST-NGRFRDVVVAVQKSGFAWAFDRDSGDIIW 308
N+P D D +L+ + T NG+ + + + ++GFA+A DR +G +W
Sbjct: 322 NDP-------YDYDSVAENVLVDVPTPNGQVQKLALEADRNGFAYAIDRTNGKFLW 370
>gi|264677524|ref|YP_003277430.1| pyrrolo-quinoline quinone [Comamonas testosteroni CNB-2]
gi|262208036|gb|ACY32134.1| Pyrrolo-quinoline quinone [Comamonas testosteroni CNB-2]
Length = 689
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 84/349 (24%), Positives = 134/349 (38%), Gaps = 69/349 (19%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFY--AGKDISATPAVANGVVYFPSWNG 58
W +HG + R++ + I+ V L L WS+ + + + ATP V NGV+Y +
Sbjct: 37 WPSHGLNYQENRFSPLK-QIHSGNVDQLGLAWSYKLDSSRGVEATPIVVNGVMYVSAPWS 95
Query: 59 YLYAVNAFNGALIW--EQNLSKLTGLSGTGIVVNVTVAV-------------VVAVSRSN 103
++AV+A G +W + + + G VVN VAV ++A+ +
Sbjct: 96 VVHAVDARTGKALWTYDPQVPREMAYKGCCDVVNRGVAVYKGKVFVGAFDGRLIALDAAT 155
Query: 104 GELVWSTQIDPRPRSQITMSGS--VYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRN 161
G VWST T++G+ V+ G Y+G E RG + D
Sbjct: 156 GRQVWSTDTIDNKNFSYTITGAPRVFKGKVYIGNGGAEYGA--------RGYVTAYDAET 207
Query: 162 GRIIWQTYMLPDNGGK----------------RGGY----SGAAVWGS---SPAIDVIRR 198
G+ +W+ Y +P + + G Y G VW S P +D +
Sbjct: 208 GKQVWRFYTVPGDPARAYESKALEEAAKTWDPAGRYWESGGGGTVWNSLVFDPELDQMYI 267
Query: 199 QKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDC 258
N ++Y SIVALD D+G W +
Sbjct: 268 GVGNGSPWAHRKRSPAGGDNLYLGSIVALDPDTGAYKW------------------HYQE 309
Query: 259 PPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
PG N D + + I +G+ R V++ K+G+ + DR SG I
Sbjct: 310 TPGDNWDFTSAQDIVQADIRIDGKLRKVLLHAPKNGYFFVIDRQSGKFI 358
>gi|146338773|ref|YP_001203821.1| quinoprotein ethanol dehydrogenase [Bradyrhizobium sp. ORS 278]
gi|146191579|emb|CAL75584.1| Putative Quinoprotein ethanol dehydrogenase [Bradyrhizobium sp. ORS
278]
Length = 592
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 81/356 (22%), Positives = 150/356 (42%), Gaps = 82/356 (23%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAGK----------DISATPAVANGV 50
WL+H + + R++ + IN TV+NL++ W+ + G + TP V NG+
Sbjct: 49 WLHHHKNYSGTRFSTLKE-INKDTVKNLKVAWTMHLGGVEGGGIWSHGGLEGTPIVENGM 107
Query: 51 VYFPSWNGYLYAVNAF--NGALIWEQNL----------------SKLTGLSGTGIVVNVT 92
+Y G +Y ++A G L+W+ + ++ L G ++ +
Sbjct: 108 IYVTDGWGSVYKIDARGGKGQLVWKMDPKTDHDWAGAIACCGVDNRGVALWGNLVISHTL 167
Query: 93 VAVVVAVSRSNGELVWSTQI-DPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFR 151
++A ++ G++ W Q+ DP IT + + G++ E + R
Sbjct: 168 DGRLIATNKETGQVAWQRQVADPDKGEVITGAPLIVKNMAVSGVAGAEYGI--------R 219
Query: 152 GSLAKLDVRNGRIIWQTYMLPDNGG------KRGGYSGAAVWGSS-------PAIDVIRR 198
G +A D+ + +W+T+ +P G K + AA GS+ PA D I
Sbjct: 220 GWIAATDLTTQKEVWRTHTIPAKGEPGSETWKDSNDAAAAGGGSTWVTGTYDPATDTIIW 279
Query: 199 QKQN-----NQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVP 253
N + +P ++Y +S +ALD ++G+I W + T P
Sbjct: 280 GVGNPGPDWDNAYRP-------GDNLYTDSSLALDANTGKIKWH--------YQHT---P 321
Query: 254 NNPDCPPGPNLDADFGEAPMLLTIST-NGRFRDVVVAVQKSGFAWAFDRDSGDIIW 308
N+P D D +L+ + T NG+ + + + ++GFA+A DR +G +W
Sbjct: 322 NDP-------YDYDSVAENVLVDVPTPNGQTQKLALEADRNGFAYAIDRTNGKFLW 370
>gi|325002925|ref|ZP_08124037.1| alcohol dehydrogenase [Pseudonocardia sp. P1]
Length = 560
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 73/336 (21%), Positives = 136/336 (40%), Gaps = 61/336 (18%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAGKD----------ISATPAVANGV 50
W+ + GD + +R++ + IN ++L++ W F A A P V +G+
Sbjct: 46 WITYYGDYDGKRHSLLD-QINAGNAKDLKVAWIFQASATGMIASTSTYAFEACPIVVDGI 104
Query: 51 VYFPSWNGYLYAVNAFNGALIWE-------------QNLSKLTGLSGTGIVVNVTVAVVV 97
++ W+G+L+A++A G +W N+++ ++ + + A +V
Sbjct: 105 MFVTGWDGWLWALDAKTGEQLWRYKHGIPIDVTLCCANVNRGCAVAKGKVYMVTQNAQLV 164
Query: 98 AVSRSNGELVWSTQI-DPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAK 156
A+ +NG+ VW I D R +++ V G + E + RG +
Sbjct: 165 ALDATNGQKVWQKTIGDVRAGESASIAPLVIKDMLITGSAGGEYGV--------RGHIDA 216
Query: 157 LDVRNGRIIWQTYMLPDNGGKRGGYSGAAVWGSSPAI-DVIRRQKQNNQTTKPTHPDQCI 215
D+ G W+TY +P + G G+ W PA + +R N+ T P+ +
Sbjct: 217 WDLETGEQRWRTYTVP-----KPGEPGSETW---PADGEAWQRGGGNHWVTGTYDPELNL 268
Query: 216 ------------------SSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPD 257
++Y +S+VALD+D+G I W +D++ + +
Sbjct: 269 YYAGTGNPAPDFDGGVREGDNLYTDSVVALDVDTGEIRWHYQFTPHDLWDYDSTMEMTLF 328
Query: 258 CPPGPNLDADFGE-APMLLTISTNGRFRDVVVAVQK 292
G L A F + M + TNG + V V +
Sbjct: 329 ERDGKKLLAHFDKNGYMFVLDRTNGELQHVTPFVDR 364
>gi|348172477|ref|ZP_08879371.1| quinoprotein ethanol dehydrogenase precursor [Saccharopolyspora
spinosa NRRL 18395]
Length = 561
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 75/349 (21%), Positives = 137/349 (39%), Gaps = 81/349 (23%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAGK----------DISATPAVANGV 50
WL + G + +RY+ + IN V+ L W F +G A P V +G+
Sbjct: 45 WLTYYGAYDGQRYSPLD-QINTDNVKRLVPAWVFQSGSAGLHAGPSTYSFEAAPIVVDGI 103
Query: 51 VYFPSWNGYLYAVNAFNGALIWEQ-------------NLSKLTGLSGTGIVVNVTVAVVV 97
++ W+G+++A++ G +W N+++ ++ + V A V+
Sbjct: 104 MFVAGWDGFVWAIDGRTGQELWRYKHAIPYDTSLCCGNVNRGAAVAKGKVFVVTLNAHVI 163
Query: 98 AVSRSNGELVWSTQI-DPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAK 156
A+ +NG+LVW T D R T++ V VG S E + RG L
Sbjct: 164 ALDATNGKLVWDTTYGDVRAGESATVAPLVVKDMVVVGSSGGEFGV--------RGHLDA 215
Query: 157 LDVRNGRIIWQTYMLPDNGGKRGGYSGAAVWGSSPAIDVIRRQKQNNQTTKPTHPDQCI- 215
++ GR +W+TY +P G + G+ W PA R N T P+ +
Sbjct: 216 FELDTGRHVWRTYTVPKPGER-----GSETWPDGPAW---TRGGGNCWVTGTFDPELNLM 267
Query: 216 -----------------SSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDC 258
++Y +S++A+D D+G I W +D++
Sbjct: 268 YWGTGNPAPDFDGGIREGDNLYTDSVIAVDPDNGEIRWHYQYNPHDLW------------ 315
Query: 259 PPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
D+ + +G R ++ K+G+ + DR +G+++
Sbjct: 316 --------DYDSTMEHILFELDG--RKLLAHFDKNGYFFVLDRTNGELV 354
>gi|329896996|ref|ZP_08271789.1| Quino(hemo)protein alcohol dehydrogenase, PQQ-dependent [gamma
proteobacterium IMCC3088]
gi|328921504|gb|EGG28889.1| Quino(hemo)protein alcohol dehydrogenase, PQQ-dependent [gamma
proteobacterium IMCC3088]
Length = 656
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 83/348 (23%), Positives = 136/348 (39%), Gaps = 72/348 (20%)
Query: 2 LNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAG--KDISATPAVANGVVYFPSWNGY 59
+ HG + +RY+ IN V+NL + W + G + I ATP V +GV+Y
Sbjct: 1 MAHGRTYSEQRYS-PLSKINAENVKNLGMAWHYDLGDTRGIEATPIVVDGVMYVTGGWSK 59
Query: 60 LYAVNAFNGALIW--EQNLSKL--------------TGLSGTGIVVNVTVAVVVAVSRSN 103
++A++A G IW + + K T G I V ++A+ +
Sbjct: 60 VFALDAKTGEEIWTYDPKMDKAWFVNMCCDAVNRGATAWEGK-IYSGVGDGRLIAIDAAT 118
Query: 104 GELVWSTQIDPRPRS-QITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNG 162
GELVW Q P+ R IT + V G +G E + RG + D G
Sbjct: 119 GELVWEVQTTPKDRPYSITGAPRVVDGKVIIGNGGSELGV--------RGFVTAYDANTG 170
Query: 163 RIIWQTYMLPDNGGKR--------------------GGYSGAAVWGS---SPAIDVIRRQ 199
+W+ Y +P N + GG G W S P ++++
Sbjct: 171 EQVWRFYTVPGNPNEPFENAIHEQTVKTWSGEWWTVGG--GGTAWDSIAHDPELNLVYIG 228
Query: 200 KQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCP 259
N + +++ +SIVAL+ ++G W Y T
Sbjct: 229 VGNGAPWNRMYRSNGTGDNLFLSSIVALNAETGEYVW---------HYQTT--------- 270
Query: 260 PGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
PG + D + +L + +GR R V++ K+GF + DR++G+ I
Sbjct: 271 PGESWDYTATQHMILADMEFDGRMRKVIMQAPKNGFFYVIDRETGEFI 318
>gi|429330111|ref|ZP_19210916.1| methanol/ethanol family PQQ-dependent dehydrogenase [Pseudomonas
putida CSV86]
gi|428765202|gb|EKX87315.1| methanol/ethanol family PQQ-dependent dehydrogenase [Pseudomonas
putida CSV86]
Length = 726
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 86/353 (24%), Positives = 140/353 (39%), Gaps = 78/353 (22%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRN---LRLRWSFYAGKD--ISATPAVANGVVYFPS 55
W++ G + +RY+ + +T RN L L WS+ D + ATP V +GV+Y
Sbjct: 61 WMSTGRTYDEQRYS----PLKQITDRNVGQLGLAWSYKLDLDRGVEATPIVVDGVMYTTG 116
Query: 56 WNGYLYAVNAFNGALIWEQNLSKLTGLSGTGI--VVNVTVAV-------------VVAVS 100
+YA++A NG LIW+ + +G VN VAV + A+
Sbjct: 117 PFSVVYALDARNGKLIWKYDPKSDRNRAGEACCDAVNRGVAVWKGKVYVGVLDGRLEAID 176
Query: 101 RSNGELVWS--TQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLD 158
G+L WS T+ D + IT + V G +G E + RG + D
Sbjct: 177 ARTGQLAWSVDTRADHKRSYTITGAPRVVNGKVVIGNGGAEFGV--------RGYVTAYD 228
Query: 159 VRNGRIIWQTYMLP---------------------DNGGKRGGYSGAAVWGS---SPAID 194
G+ W+ Y +P D ++GG G W S P ++
Sbjct: 229 AETGKQAWRFYTVPGDPKLPPEGKGMEIAAKTWHGDAFVEQGG--GGTAWDSFAFDPELN 286
Query: 195 VIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPN 254
++ N P Q +++ +SIVA++ D+G W Y T
Sbjct: 287 LLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVW---------HYQTT---- 333
Query: 255 NPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
PG D + +L + +GR R V++ K+GF + DR +G+++
Sbjct: 334 -----PGDAWDYTATQHMILAELPIDGRQRKVLMQAPKNGFFYVIDRATGELL 381
>gi|320105655|ref|YP_004181245.1| PQQ-dependent enzyme-like protein [Terriglobus saanensis SP1PR4]
gi|319924176|gb|ADV81251.1| PQQ-dependent enzyme-like protein [Terriglobus saanensis SP1PR4]
Length = 533
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 77/337 (22%), Positives = 132/337 (39%), Gaps = 61/337 (18%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAGKD--ISATPAVANGVVYFPSWNG 58
W + GD RRY+ + P LR +W F++ + TP V GV++ N
Sbjct: 38 WPTYNGDYTGRRYS-SLTQVTPENAHALRAQWVFHSRNAGVLQVTPVVVAGVMFVTGSND 96
Query: 59 YLYAVNAFNGALIWEQ--------------NLSKLTGLSGTGIVVNVTVAVVVAVSRSNG 104
YA++A G +W ++++ + G+ I + A ++ + +G
Sbjct: 97 -AYALDAVTGKTLWHHARPVSDGLIDDASGHINRGVAVMGSQIYMETDNAHLLCLDARSG 155
Query: 105 ELVWSTQIDPRPRSQ-ITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGR 163
L+W R+ T + V G VG S ++ + RG +A D + G+
Sbjct: 156 NLLWDVAYAKDNRNYGATSAPLVVKGKVLVGTSGGDDGV--------RGFVAAFDAQTGK 207
Query: 164 IIWQTYMLPDNG---------GKRGGYSGAAVWGS---SPAIDVIRRQKQNNQTTKPTHP 211
W+ + +P G G + G W P ++ I N + P
Sbjct: 208 EAWRFWTIPAPGEPGSETWPKGDIYLHGGGTTWMPGTYDPELNTIFWGTGN---SSPDFD 264
Query: 212 DQCISSD-IYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGE 270
D +Y + I+ALD D+G++ W F FT P D D E
Sbjct: 265 GSVREGDNLYTDCIIALDPDTGKLKWH--------FQFT----------PHDLNDFDATE 306
Query: 271 APMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
P+L+ GR R +V+ ++GF + DR +G+ +
Sbjct: 307 TPVLVDAIYQGRSRKLVIQANRNGFIYTLDRTTGEFL 343
>gi|116624006|ref|YP_826162.1| quinoprotein glucose dehydrogenase [Candidatus Solibacter usitatus
Ellin6076]
gi|116227168|gb|ABJ85877.1| Quinoprotein glucose dehydrogenase [Candidatus Solibacter usitatus
Ellin6076]
Length = 603
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 81/355 (22%), Positives = 135/355 (38%), Gaps = 80/355 (22%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAGKD--ISATPAVANGVVYFPSWNG 58
W ++ G ++ +Y+ I V L + W + G D + P VA+G++Y + N
Sbjct: 21 WRDYSGGADSAQYS-ALRQITRANVNQLEIAWVYPTGDDKKYAFNPLVADGMIYVLAKNN 79
Query: 59 YLYAVNAFNGALIWEQNL-SKLTGLSGTGI----------------------VVNVTVAV 95
+ A++A G IW + + T ++ G+ ++
Sbjct: 80 SVVALDAATGKEIWSHSPDTPTTIITSRGLNYWESKDGKDRRLLFCANHSLRAIDARTGK 139
Query: 96 VVAVSRSNGELVWSTQIDPRPRS----QITMSGSVYMGAFYVGLSSLEEALPADQCCTFR 151
+A NG + + P++ Q T G V+ +G ++ E A
Sbjct: 140 AIATFGVNGRVDLKEGLGREPKNIKLVQSTTPGRVFENLLILGSATNEGYTSAP------ 193
Query: 152 GSLAKLDVRNGRIIWQTYMLPDNGGKRGGYS-----------GAAVWGSSPAIDVIRRQK 200
G L DVR G +W + +P G GY GA VWG I +
Sbjct: 194 GDLRAFDVRTGAQVWVFHTIPHPG--EFGYETWPKDAWKNVGGANVWGE------ISVDE 245
Query: 201 QNNQTTKPTHPDQC-------ISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVP 253
+ PT + +D++A+ ++ALD +G+ W + +DI+
Sbjct: 246 KRGIVYAPTASAKYNFYGADRKGADLFADCLLALDARTGKRIWHFQMVHHDIW------- 298
Query: 254 NNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDIIW 308
D D AP LLT+ G+ D V V K GF W FDR +G+ +W
Sbjct: 299 -----------DYDDATAPKLLTLKHEGKMVDAVAQVSKQGFVWVFDRVTGEPLW 342
>gi|413961626|ref|ZP_11400854.1| PQQ-dependent dehydrogenase [Burkholderia sp. SJ98]
gi|413930498|gb|EKS69785.1| PQQ-dependent dehydrogenase [Burkholderia sp. SJ98]
Length = 579
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 78/319 (24%), Positives = 125/319 (39%), Gaps = 58/319 (18%)
Query: 20 INPVTVRNLRLRWSFYAGKDI----SATPAVANGVVYFPSWNGYLYAVNAFNGALIW--E 73
I+ V+NL+ WS+ KD+ ATP V ++ + +YA +A G +W E
Sbjct: 74 IDTSNVKNLKQVWSYKFPKDLQQGFEATPIVNGRFLFVTTPKDNVYAFDAATGKQLWKYE 133
Query: 74 QNLSKLTGLSGTGIVVNVTVAV-------------VVAVSRSNGELVWSTQI-DPRPRSQ 119
NL + + VVN VA+ V A+ G LVW + DP
Sbjct: 134 PNLDAKSFKTACCDVVNRGVALYGKNVYVAMLNGEVAALDAQTGSLVWKKAMFDPGVGYA 193
Query: 120 ITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNGGKRG 179
+++ GA VG S E RG +A LD +G+++W+ Y +P G K
Sbjct: 194 FSLAPLALDGALVVGSSGGEYGA--------RGFIAALDPNDGKMLWKRYTVP--GAKEP 243
Query: 180 G----------YSGAAVWGSSPAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDI 229
G + GA W + + P D ++Y++S++ALD
Sbjct: 244 GGNTWPDGMQEHGGAPAWLTGTYDAASKTLYWGVGNPGPWLADLRPGDNLYSDSLLALDP 303
Query: 230 DSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVA 289
+G + W D + D D P+L I G+ D ++
Sbjct: 304 KTGDLKWHYQYTTNDTW------------------DYDGVNTPVLANIKYQGKDYDAIIH 345
Query: 290 VQKSGFAWAFDRDSGDIIW 308
++GF A DR +G +I+
Sbjct: 346 ADRNGFFHAIDRSNGKLIY 364
>gi|170721869|ref|YP_001749557.1| methanol/ethanol family PQQ-dependent dehydrogenase [Pseudomonas
putida W619]
gi|169759872|gb|ACA73188.1| PQQ-dependent dehydrogenase, methanol/ethanol family [Pseudomonas
putida W619]
Length = 726
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 84/350 (24%), Positives = 139/350 (39%), Gaps = 72/350 (20%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAGKD--ISATPAVANGVVYFPSWNG 58
W++HG + +RY+ + IN V L L WS+ D + ATP V +GV+Y
Sbjct: 48 WMSHGRTYDEQRYSPLKA-INQGNVNQLGLAWSYKLDLDRGVEATPIVVDGVMYTTGPFS 106
Query: 59 YLYAVNAFNGALIWEQNLSKLTGLSGTGI--VVNVTVAV-------------VVAVSRSN 103
+YA++A NG L+W+ + +G VN VAV + A+
Sbjct: 107 VVYALDARNGTLLWKYDPQSDRHRAGEACCDAVNRGVAVWQGKVYVGVLDGRLEAIDAKT 166
Query: 104 GELVWS--TQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRN 161
G+ VWS T+ D + IT + V G +G E + RG + D
Sbjct: 167 GKRVWSVDTRDDDKRSYTITGAPRVVNGKVIIGNGGAEFGV--------RGYVTAYDAET 218
Query: 162 GRIIWQTYMLP---------------------DNGGKRGGYSGAAVWGS---SPAIDVIR 197
G+ W+ + +P D + GG G W S P ++++
Sbjct: 219 GKQAWRFFTVPGDPKLPPENKAMEIASKTWHGDAYVEWGG--GGTAWDSFAYDPELNLLY 276
Query: 198 RQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPD 257
N P Q +++ +SIVA++ D+G W Y T
Sbjct: 277 IGVGNGSMWDPKWRSQAKGDNLFLSSIVAVNADTGEYVW---------HYQTT------- 320
Query: 258 CPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
PG D + +L + +G+ R V++ K+GF + DR +G+++
Sbjct: 321 --PGDAWDFTATQHMILAELPIDGKPRKVLMQAPKNGFFYVLDRATGELL 368
>gi|88704685|ref|ZP_01102398.1| alcohol dehydrogenase [Congregibacter litoralis KT71]
gi|88701006|gb|EAQ98112.1| alcohol dehydrogenase [Congregibacter litoralis KT71]
Length = 731
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 84/350 (24%), Positives = 138/350 (39%), Gaps = 72/350 (20%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRW--SFYAGKDISATPAVANGVVYFPSWNG 58
WL HG +R++ + IN V L L W + I TP +A+G ++ + G
Sbjct: 66 WLTHGRTYGEQRFSPLDA-INENNVEELGLAWYADLPTDRGIETTPLMADGKLFVTASWG 124
Query: 59 YLYAVNAFNGALIWEQN--LSKLTGLSGTGIVVNVTVAV-------------VVAVSRSN 103
++ A +A G +W + + K G+ VVN A+ + A+ R +
Sbjct: 125 HVLAYDAKTGEELWHHDPKVPKDYGVHACCDVVNRGAALWGNNVYAASLDGRLFALDRDS 184
Query: 104 GELVWS--TQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRN 161
GELVW T+I+ IT + + G +G E + RG + D
Sbjct: 185 GELVWEVDTRINTTDSYTITGAPRIVNGKVVIGNGGAE--------MSVRGYVTAYDAVT 236
Query: 162 GRIIWQTYMLPDN-----------------GGK--RGGYSGAAVWGS---SPAIDVIRRQ 199
G W+ Y +P N GK G G W + P ++++
Sbjct: 237 GEQAWRFYTVPGNPADGFEDETQERIAKTWTGKWWENGKGGGTAWDAFAFDPELNLLYIG 296
Query: 200 KQNNQT--TKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPD 257
N + K PD +++ +SIVA+D D+G AW Y T
Sbjct: 297 VGNGASWNQKIRSPDG--GDNLFISSIVAVDADTGEYAW---------HYQTT------- 338
Query: 258 CPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
PG N D + +L + +G R V++ K+GF + DR+ G+++
Sbjct: 339 --PGDNWDYTATQHMILAELPIDGEKRKVLMQAPKNGFFYVLDREDGELL 386
>gi|375095061|ref|ZP_09741326.1| PQQ-dependent dehydrogenase, methanol/ethanol family
[Saccharomonospora marina XMU15]
gi|374655794|gb|EHR50627.1| PQQ-dependent dehydrogenase, methanol/ethanol family
[Saccharomonospora marina XMU15]
Length = 560
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 73/336 (21%), Positives = 135/336 (40%), Gaps = 61/336 (18%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAGKD----------ISATPAVANGV 50
W+ + GD + +R++ + IN V+NL++ W A A P V +GV
Sbjct: 46 WITYYGDYDGKRHSLLD-QINVDNVKNLKVAWIHQASATGLIASTSTYAFEACPLVVDGV 104
Query: 51 VYFPSWNGYLYAVNAFNGALIWE-------------QNLSKLTGLSGTGIVVNVTVAVVV 97
++ W+G+L+A++A G +W N+++ ++ + + A ++
Sbjct: 105 MFVTGWDGWLWALDATTGEQLWRYKHAVPFDVTLCCANVNRGCAVANGKVYMVTQNAQLL 164
Query: 98 AVSRSNGELVWSTQI-DPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAK 156
A+ +NG VW I D R +++ V G + E + RG +
Sbjct: 165 AIDATNGRKVWQKTIGDVRAGESASIAPLVVKDTIITGSAGGEYGV--------RGHIDC 216
Query: 157 LDVRNGRIIWQTYMLPDNGGKRGGYSGAAVWGSSPAI-DVIRRQKQNNQTTKPTHPDQCI 215
D+ G W+TY +P + G G+ W PA + +R N+ T P+ +
Sbjct: 217 WDLETGEQRWRTYTVP-----KPGEPGSETW---PADGEAWQRGGANHWVTGTYDPELNL 268
Query: 216 ------------------SSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPD 257
++Y +S+VA+D+D+G I W +D++ + +
Sbjct: 269 YYAGTGNPAPDFDGEVREGDNLYTDSVVAVDVDTGEIKWHYQFTPHDLWDYDSTMEMTLF 328
Query: 258 CPPGPNLDADFGE-APMLLTISTNGRFRDVVVAVQK 292
G L A F + M + TNG + V V +
Sbjct: 329 ERDGKKLLAHFDKNGYMFVLDRTNGELQHVTPFVDR 364
>gi|390168315|ref|ZP_10220278.1| alcohol dehydrogenase large subunit [Sphingobium indicum B90A]
gi|389589072|gb|EIM67104.1| alcohol dehydrogenase large subunit [Sphingobium indicum B90A]
Length = 699
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 83/356 (23%), Positives = 145/356 (40%), Gaps = 75/356 (21%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAG--KDISATPAVANGVVYFPSWNG 58
WL +GG N Y+ + IN TV++L+ WSF + + P V +GV+Y +
Sbjct: 45 WLVNGGTFNGDHYSKLD-QINVNTVKDLKPAWSFDFDTVRGQQSEPLVVDGVMYVSTSWS 103
Query: 59 YLYAVNAFNGALIW--EQNLSKLTGLSGTGIVVNVTVAV-------------VVAVSRSN 103
+YA++A G IW + + TG+ VN VAV ++A+S
Sbjct: 104 KVYALDAATGRQIWFFDPMVPGDTGVKVCCDTVNRGVAVYKGKVYVGTLDGRLIAISART 163
Query: 104 GELVWSTQ-IDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNG 162
G +WSTQ +DP+ IT + V +G + + + RG ++ D G
Sbjct: 164 GTQLWSTQTVDPKSALTITGAPRVIHDKVIIGNAGADFGV--------RGYVSAYDAATG 215
Query: 163 RIIWQTYMLPDNGGK-------------------RGGYS----GAAVWGS---SPAIDVI 196
+++W+ Y +P + K G Y+ G W + P ++ +
Sbjct: 216 KLVWRFYTVPGDPAKGPDHAASDEIMEKLVRPTWSGDYAKYGGGGTAWHAISYDPELNQL 275
Query: 197 RRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNP 256
N P + +++ S++ALD D+G+ W
Sbjct: 276 YIGTGNGSPWNPKYRTAGKGDNLFLCSVIALDPDTGKYIW-------------------- 315
Query: 257 DCPPGPNLDADFGEA-PMLL-TISTNGRFRDVVVAVQKSGFAWAFDRDSGDIIWFK 310
P D+ + PM+L ++ +G+ R V++ K+GF + DR +G +I K
Sbjct: 316 HYQENPQEAWDYNSSQPMILGNLTIDGKIRKVLMHAPKNGFFYVLDRTNGKVISAK 371
>gi|367477033|ref|ZP_09476396.1| putative Quinoprotein ethanol dehydrogenase [Bradyrhizobium sp. ORS
285]
gi|365270700|emb|CCD88864.1| putative Quinoprotein ethanol dehydrogenase [Bradyrhizobium sp. ORS
285]
Length = 592
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 81/356 (22%), Positives = 149/356 (41%), Gaps = 82/356 (23%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAGK----------DISATPAVANGV 50
WL+H + + R++ + IN V+NL++ W+ + G + TP V NG+
Sbjct: 49 WLHHHKNYSGTRFSTLKE-INKDNVKNLKVAWTMHLGGVEGGGIWSHGGLEGTPIVENGM 107
Query: 51 VYFPSWNGYLYAVNAF--NGALIWEQNL----------------SKLTGLSGTGIVVNVT 92
+Y G +Y ++A G L+W+ + ++ L G +V +
Sbjct: 108 IYVTDGWGSVYKIDARGGKGQLVWKMDPKTDHDWAGAIACCGVDNRGVALWGDLVVSHTL 167
Query: 93 VAVVVAVSRSNGELVWSTQI-DPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFR 151
++A ++ G++ W Q+ DP IT + + G++ E + R
Sbjct: 168 DGRLIATNKETGQVAWQRQVADPDKGEVITGAPLIVKNMAISGVAGAEYGI--------R 219
Query: 152 GSLAKLDVRNGRIIWQTYMLPDNGG------KRGGYSGAAVWGSS-------PAIDVIRR 198
G +A D+ + +W+T+ +P G K + AA GS+ PA D I
Sbjct: 220 GWIAATDLGTQKEVWRTHTIPAKGEPGSETWKDSNDAAAAGGGSTWVTGTYDPATDTIIW 279
Query: 199 QKQN-----NQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVP 253
N + +P ++Y +S +ALD ++G+I W + T P
Sbjct: 280 GVGNPGPDWDNAYRP-------GDNLYTDSSLALDANTGKIKWH--------YQHT---P 321
Query: 254 NNPDCPPGPNLDADFGEAPMLLTIST-NGRFRDVVVAVQKSGFAWAFDRDSGDIIW 308
N+P D D +L+ + T NG+ + + + ++GFA+A DR +G +W
Sbjct: 322 NDP-------YDYDSVAENVLVDVPTPNGQTQKLALEADRNGFAYAIDRTNGKFLW 370
>gi|209522256|ref|ZP_03270888.1| Alcohol dehydrogenase (acceptor) [Burkholderia sp. H160]
gi|209497304|gb|EDZ97527.1| Alcohol dehydrogenase (acceptor) [Burkholderia sp. H160]
Length = 577
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 81/365 (22%), Positives = 145/365 (39%), Gaps = 85/365 (23%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAG--KDISATPAVANGVVYFPSWNG 58
WL+ G R+ Y IN V LR + F + + P V +GV++ +
Sbjct: 63 WLHSNGSYAQTRF-YPGSQINKTNVAKLRPAFIFQTAVNESMETAPIVKDGVMFLTTSFN 121
Query: 59 YLYAVNAFNGALIW--EQNLSKLT-----------GLSGTGIVVNVTVAVVVAVSRSNGE 105
++YA++A G W + + +T +SG + + + +VA+ G
Sbjct: 122 HVYAIDATTGKEFWHYKHKMGPVTTFCCGPNNRGVAISGDRLYMGTLDSKLVALDAKTGN 181
Query: 106 LVWSTQI-DPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRI 164
++W +QI +P TM+ +V G +G + E + RG + D +G++
Sbjct: 182 VLWQSQIANPDEGYSETMAPAVVDGKVLIGTNGGEYGI--------RGFVKAYDANSGQL 233
Query: 165 IWQTYMLPDNGGK--------------------------RGG----YSGAAVWGSSPAID 194
+W Y +PD+G + +GG G VW +PAID
Sbjct: 234 LWTFYTIPDSGQEGVWATKDATGRDEKRDIAAEKKQLADKGGDFYKTLGGGVW-MTPAID 292
Query: 195 VIRRQKQNNQTTKPTHPDQCI------SSDIYANSIVALDIDSGRIAWAKPLGGYDIFYF 248
+K N +P + ++Y +S+VA+D+D+G+ W +D++
Sbjct: 293 ----RKTNTVYFVVGNPSPDLYGAVRPGDNLYTDSLVAIDLDTGKYKWHYQYVPHDVW-- 346
Query: 249 TCLVPNNPDCPPGPNLDADFGEAPMLLTISTN-GRFRDVVVAVQKSGFAWAFDRDSGDII 307
D D P+L+ + N G+ +V K+G + DR +G +I
Sbjct: 347 ----------------DLDAASPPVLIDVRDNDGKMIPGIVHAGKTGHVYVHDRATGRLI 390
Query: 308 WFKLA 312
F A
Sbjct: 391 RFSQA 395
>gi|114797244|ref|YP_758863.1| alcohol dehydrogenase (acceptor) [Hyphomonas neptunium ATCC 15444]
gi|114737418|gb|ABI75543.1| alcohol dehydrogenase (acceptor) [Hyphomonas neptunium ATCC 15444]
Length = 717
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 85/354 (24%), Positives = 140/354 (39%), Gaps = 74/354 (20%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSF--YAGKDISATPAVANGVVYFPSWNG 58
WL +GG + +R++ IN V L + W++ + + +TP V +GV+Y S
Sbjct: 43 WLTYGGTYDEQRHSK-LTAINKENVGELGVAWTYDLATNRGVESTPIVVDGVMYVTSAWS 101
Query: 59 YLYAVNAFNGALIW--EQNLSKLTGLSGTGIVVNVTVAV-------------VVAVSRSN 103
+YA++A G W + + G+ VVN VAV + A++
Sbjct: 102 VVYALDAKTGEEKWVYDPGADRAVGVKACCDVVNRGVAVYDGKVYVGVIDGRLEALNAET 161
Query: 104 GELVWS-TQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNG 162
GE++WS +D IT + V G +G E + RG L+ D +G
Sbjct: 162 GEVIWSKVTVDQEKPYTITGAPRVVNGKVLIGNGGAELGV--------RGYLSAYDTSSG 213
Query: 163 RIIWQTYMLPDNGGKRGGYS--------GAAVWGSSPA----------IDVIRRQKQNNQ 204
++W+ Y +P+ + G + G WG A D I + NNQ
Sbjct: 214 DLVWRFYTVPNPKKQPDGAASDDAFVQVGNVTWGDEGAWTTDGGGGTVWDSIVYDEVNNQ 273
Query: 205 TT---------KPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNN 255
T D +++ +SIVA+D+++G W +F
Sbjct: 274 IIFGVGNGSPWNRTFRDPSAGDNLFLSSIVAVDLETGAYKW----------HFQTT---- 319
Query: 256 PDCPPGPNLDADFGEAPML--LTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
PG N D + +L L + NG R V + K+GF + D +G+ I
Sbjct: 320 ----PGDNWDYTATQTIILADLPLGENGASRRVAMQAPKNGFFYVIDAATGEYI 369
>gi|334140692|ref|YP_004533894.1| alcohol dehydrogenase [Novosphingobium sp. PP1Y]
gi|333938718|emb|CCA92076.1| alcohol dehydrogenase large subunit [Novosphingobium sp. PP1Y]
Length = 715
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 85/349 (24%), Positives = 140/349 (40%), Gaps = 73/349 (20%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAGKDIS----ATPAVANGVVYFPSW 56
W ++G + +RY+ IN V++L L W +A D S ATP V +GV+Y +
Sbjct: 52 WPSYGRTYDEQRYS-PLTDINRQNVKDLGLAW--FADLDTSRGQEATPLVIDGVIYISTA 108
Query: 57 NGYLYAVNAFNGALIW--EQNLSKLTGLSGTGIVVNVTVAV-------------VVAVSR 101
+ A +A G +W + + G++G VVN +A ++A+ R
Sbjct: 109 WSKVKAYDAVTGKELWAFDPEVPGKAGVNGCCDVVNRGLAAWGDKLFLGTFDGRLIALDR 168
Query: 102 SNGELVWS-TQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVR 160
+G+ +WS +D IT + V G +G E + RG + D +
Sbjct: 169 KSGKTLWSQVTVDQSQPYTITGAPRVIGGKVIIGNGGAEMGV--------RGYVTAYDAQ 220
Query: 161 NGRIIWQTYMLPDNGGK-------------------RGGYSGAAVWGS---SPAIDVIRR 198
G+ W+ Y +PD GK GG G VW S P +D++
Sbjct: 221 TGKQAWRFYTVPDQPGKNSEKYLKDAEKTWNGKWWAEGG--GGTVWDSMAYDPELDLLYI 278
Query: 199 QKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDC 258
N + ++Y +SIVA+ ++G W F T
Sbjct: 279 GVGNGSPWNHGIRSEGKGDNLYLSSIVAVRPETGEYVWH--------FQET--------- 321
Query: 259 PPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
PG D + ML + +G+ R V++ K+GF + DR++G+ I
Sbjct: 322 -PGETWDFTATQHIMLADLEIDGKIRKVLMQAPKNGFFYVIDRETGEFI 369
>gi|377813259|ref|YP_005042508.1| putative quinoprotein alcohol dehydrogenase [Burkholderia sp. YI23]
gi|357938063|gb|AET91621.1| putative quinoprotein alcohol dehydrogenase [Burkholderia sp. YI23]
Length = 579
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 76/364 (20%), Positives = 137/364 (37%), Gaps = 93/364 (25%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAG--KDISATPAVANGVVYFPSWNG 58
WL+ G R+A IN V L+ + F + + P V+NGV++ +
Sbjct: 66 WLHSNGSYAETRFAPA-TQINTSNVAKLKPAFIFQTAVMESMETAPIVSNGVMFLTTSYN 124
Query: 59 YLYAVNAFNGALIW--EQNLSKLT-----------GLSGTGIVVNVTVAVVVAVSRSNGE 105
++YA++A G W + + +T ++G + + + +VA+ G
Sbjct: 125 HVYAIDAVTGKEFWHYKHKMGPVTTFCCGPNNRGVAIAGNRLFMGTLDSKLVALDAKTGG 184
Query: 106 LVWSTQI-DPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRI 164
+WSTQI DP TM+ V +G + E + RG + D +G++
Sbjct: 185 ELWSTQIADPELGYSETMAPVVVEDKVLIGTNGGEYGI--------RGFVKAFDANSGQL 236
Query: 165 IWQTYMLPDNGGKRGGYSGAAVWGSSPAIDVIRRQKQNNQTTKPTHPDQCIS-------- 216
+W Y +PD G + VW + A+ R K++ K T ++
Sbjct: 237 LWTFYTIPDTGSE-------GVWAENDAVG--RNMKRDIAAEKKTLAEKGTEFTKTLGGG 287
Query: 217 --------------------------------SDIYANSIVALDIDSGRIAWAKPLGGYD 244
++Y +S+VA+D+DSG+ W +D
Sbjct: 288 VWMAPAIDRQTRTVYFVVGNPSPDLYGAIRPGDNLYTDSLVAVDLDSGKYKWHYQYIAHD 347
Query: 245 IFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTIS-TNGRFRDVVVAVQKSGFAWAFDRDS 303
++ D D P+L+ + NG+ ++ K+GF + DR
Sbjct: 348 VW------------------DLDAASPPILIDVKDRNGQMIPGIIHGGKTGFVYVHDRRD 389
Query: 304 GDII 307
G +I
Sbjct: 390 GKLI 393
>gi|418531390|ref|ZP_13097304.1| pyrrolo-quinoline quinone [Comamonas testosteroni ATCC 11996]
gi|371451344|gb|EHN64382.1| pyrrolo-quinoline quinone [Comamonas testosteroni ATCC 11996]
Length = 687
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 83/349 (23%), Positives = 134/349 (38%), Gaps = 69/349 (19%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFY--AGKDISATPAVANGVVYFPSWNG 58
W +HG + R++ + I+ V L L WS+ + + + ATP V NGV+Y +
Sbjct: 35 WPSHGLNYQENRFSPLK-QIHGGNVDQLGLVWSYKLDSSRGVEATPIVVNGVMYVSAPWS 93
Query: 59 YLYAVNAFNGALIW--EQNLSKLTGLSGTGIVVNVTVAV-------------VVAVSRSN 103
++AV+A G +W + + + G VVN VAV ++A+ +
Sbjct: 94 VVHAVDARTGKALWTYDPQVPREMAYKGCCDVVNRGVAVYKGKVFVAAFDGRLIALDAAT 153
Query: 104 GELVWSTQIDPRPRSQITMSGS--VYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRN 161
G VWST T++G+ V+ G Y+G E RG + D
Sbjct: 154 GRQVWSTDTIDNKNFSYTITGAPRVFKGKVYIGNGGAEYGA--------RGYVTAYDAET 205
Query: 162 GRIIWQTYMLPDNGGK----------------RGGY----SGAAVWGS---SPAIDVIRR 198
G+ +W+ Y +P + + G Y G VW S P +D +
Sbjct: 206 GKQVWRFYTVPGDPAQAYESKALEEAAKTWDPAGRYWESGGGGTVWNSLVFDPELDQMYI 265
Query: 199 QKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDC 258
N ++Y SIVALD D+G W +
Sbjct: 266 GVGNGSPWAHRKRSPAGGDNLYLGSIVALDPDTGAYKW------------------HYQE 307
Query: 259 PPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
PG N D + + I +G+ R V++ K+G+ + DR +G I
Sbjct: 308 TPGDNWDFTSAQDIVQADIRIDGKLRKVLLHAPKNGYFFVIDRQNGKFI 356
>gi|295701097|ref|YP_003608990.1| PQQ-dependent enzyme-like protein [Burkholderia sp. CCGE1002]
gi|295440310|gb|ADG19479.1| PQQ-dependent enzyme-like protein [Burkholderia sp. CCGE1002]
Length = 577
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 82/365 (22%), Positives = 144/365 (39%), Gaps = 85/365 (23%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAG--KDISATPAVANGVVYFPSWNG 58
WL+ G RY Y IN V L+ + F + + P V +GV++ +
Sbjct: 63 WLHPNGSYAQTRY-YPGSQINRTNVAKLKPVFIFQTAVNESMETAPIVKDGVMFLTTSFN 121
Query: 59 YLYAVNAFNGALIW--EQNLSKLT-----------GLSGTGIVVNVTVAVVVAVSRSNGE 105
++YAV+A G W + + +T +SG + + + +VA+ G
Sbjct: 122 HVYAVDATTGKEYWHYKHKMGPVTTFCCGPNNRGVAISGDRLYMGTLDSKLVALDAKTGN 181
Query: 106 LVWSTQI-DPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRI 164
++W TQI DP TM+ +V G +G + E + RG + D +G++
Sbjct: 182 VLWQTQIADPDQGYSETMAPAVVDGKVLIGTNGGEYGI--------RGFVKAYDANSGQL 233
Query: 165 IWQTYMLPDNGGK--------------------------RGG----YSGAAVWGSSPAID 194
+W Y +P+ G + +GG G VW +PAID
Sbjct: 234 LWTFYTIPETGQEGVWATKDATGRDEKRDIDAEKKQLADKGGDFYKTLGGGVW-MTPAID 292
Query: 195 VIRRQKQNNQTTKPTHPDQCI------SSDIYANSIVALDIDSGRIAWAKPLGGYDIFYF 248
+K N +P + ++Y +S+VA+D+D+G+ W +D++
Sbjct: 293 ----RKTNTVYFMVGNPSPDLYGAIRPGDNLYTDSLVAIDLDTGKYKWHYQYVPHDVWDL 348
Query: 249 TCLVPNNPDCPPGPNLDADFGEAPMLLTISTN-GRFRDVVVAVQKSGFAWAFDRDSGDII 307
+ P P+L+ + N G+ +V K+G + DR +G +I
Sbjct: 349 DAVSP------------------PVLIDVRDNDGKMIPGIVHAGKTGHVYVHDRATGRLI 390
Query: 308 WFKLA 312
F A
Sbjct: 391 RFSQA 395
>gi|254481564|ref|ZP_05094808.1| PQQ-dependent dehydrogenase, methanol/ethanol family [marine gamma
proteobacterium HTCC2148]
gi|214038192|gb|EEB78855.1| PQQ-dependent dehydrogenase, methanol/ethanol family [marine gamma
proteobacterium HTCC2148]
Length = 715
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 83/353 (23%), Positives = 138/353 (39%), Gaps = 80/353 (22%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWS--FYAGKDISATPAVANGVVYFPSWNG 58
WL+HG DLN R++ +N +V NL L WS F + + TP VA+GV+Y
Sbjct: 43 WLSHGRDLNETRFSPLND-VNTTSVDNLGLIWSYDFDDTRGLEGTPLVADGVMYVTGNWS 101
Query: 59 YLYAVNAFNGALIWEQN---------------LSKLTGLSGTGIVVNVTVAVVVAVSRSN 103
++A++A G +W + +++ L +++ ++A+ R++
Sbjct: 102 VVHALDASTGEQLWVYDPGVPRERANAFCCGAINRGVALWEDSVLLGTLDGYLIAIDRTD 161
Query: 104 GELVW-STQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNG 162
G W S IDP IT + V G +G E + RG ++ D G
Sbjct: 162 GRERWRSLTIDPSKNYSITGAPRVANGVVVIGNGGSEYGV--------RGYVSGYDAATG 213
Query: 163 RIIWQTYMLPDNGGKRGGYS--------------------GAAVWGS---SPAIDVI--- 196
+W+ Y +P G + G+ G VW S P +D++
Sbjct: 214 EQLWRFYTVP--GNPQDGFETEQMALAAETWTGQWWTMGGGGTVWDSIAYDPELDLLYIG 271
Query: 197 --RRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPN 254
N + P D ++Y SIVAL +G W
Sbjct: 272 VGNGAPHNREMRSPDGGD-----NLYVASIVALRPQTGEYVW------------------ 308
Query: 255 NPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
+ PG D + +L IS G+ R V++ K+GF + DR +G+++
Sbjct: 309 HYQQNPGETWDYTATQQMVLADISWQGQTRQVLMQAPKNGFFFIIDRITGELL 361
>gi|386286413|ref|ZP_10063603.1| putative quinoprotein ethanol dehydrogenase [gamma proteobacterium
BDW918]
gi|385280563|gb|EIF44485.1| putative quinoprotein ethanol dehydrogenase [gamma proteobacterium
BDW918]
Length = 718
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 87/352 (24%), Positives = 141/352 (40%), Gaps = 77/352 (21%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYA--GKDISATPAVANGVVYFPSWNG 58
WL++G D +RY+ + IN V L L W+F + + ATP V +GV+Y
Sbjct: 44 WLSYGKDYKEQRYSELD-QINVGNVAKLGLAWAFDTDFNRGLEATPIVVDGVIYVTGNWS 102
Query: 59 YLYAVNAFNGALIWEQN--LSKLTGLSGTGIVVNVTVAV-------------VVAVSRSN 103
+YA++A +G L+W+ + + K VVN VAV ++A+ ++
Sbjct: 103 VVYALDARDGRLLWKYDPKVPKEWAKMACCDVVNRGVAVYEGKIIFGTLDARLIALDAAS 162
Query: 104 GELVWSTQIDPRPRSQITMSGS--VYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRN 161
GE++W T T++G+ V ++G E + RG ++ DV
Sbjct: 163 GEVLWETATADLKAYPYTITGAPRVAKDKVFIGNGGAEYGV--------RGYVSAFDVNT 214
Query: 162 GRIIWQTYMLPDN-----------------GGKRGGY-SGAAVWGSSPAIDVIRR----- 198
G+ +W+ Y +P N GK Y G VW S D + +
Sbjct: 215 GKELWRFYTVPANPADGFENDAMARAAKTWTGKWWEYGGGGTVWDSIVYDDELDQLYIGV 274
Query: 199 ---QKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNN 255
N + P D ++Y +SIVAL+ DSG W +
Sbjct: 275 GNGSPWNAKIRSPEGGD-----NLYLSSIVALNPDSGEYIW------------------H 311
Query: 256 PDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
P + D + ML ++ G R V+ K+GF + DR SG ++
Sbjct: 312 YQETPAESWDYTATQHIMLADMAIAGEQRKVIWHAPKNGFFFVIDRQSGKLL 363
>gi|357384132|ref|YP_004898856.1| pyrrolo-quinoline quinone [Pelagibacterium halotolerans B2]
gi|351592769|gb|AEQ51106.1| pyrrolo-quinoline quinone [Pelagibacterium halotolerans B2]
Length = 584
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 76/328 (23%), Positives = 130/328 (39%), Gaps = 57/328 (17%)
Query: 20 INPVTVRNLRLRWS--FYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLS 77
IN V +L+L W+ G TP V +G++Y + + + A++ G LIWE
Sbjct: 70 INKDNVGDLQLAWAWGMSPGGRSQETPLVHDGILYLQNSSHLIQALDGATGDLIWEYEYE 129
Query: 78 KLTGLSGTG----------IVVNVTVAVVVAVSRSNGELVWSTQIDPRPRSQITMSGSVY 127
++ +G +++ A ++A+ G+L+W Q+ SG +
Sbjct: 130 LPDDVNPSGERSKAIYDDKLIIATRDAHLIALDAKTGQLIWDKQVANYEHGFAFSSGPIV 189
Query: 128 M-GAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYML-----PD----NGGK 177
G G++S A P C F G DV G +W+ + + P+ NG
Sbjct: 190 ANGVVVQGMTSCSNAQPG--GCFFTGH----DVDTGEELWRVHTIARGDTPEGNSWNGLP 243
Query: 178 RGGYSGAAVW--GS-SPAIDVIRR--------QKQNNQTTKPTHPDQCISSDIYANSIVA 226
GA+ W GS P ++I + T P+ + +Y NS +A
Sbjct: 244 LESRHGASAWITGSYDPEQNLIFAGVGQPYPWNVEIAGLTPPSSDPNVTNEALYTNSTLA 303
Query: 227 LDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDV 286
+D+ +G + W Y L ++ LD D+ +L+ + NG R
Sbjct: 304 IDVTTGELEW----------YHQYLETDS--------LDLDYAYERILVDLPFNGEMRQQ 345
Query: 287 VVAVQKSGFAWAFDRDSGDIIWFKLAGP 314
VV K G + DR +G+ +W + P
Sbjct: 346 VVTTGKIGIIESLDRTTGEWLWAQETAP 373
>gi|418056980|ref|ZP_12695030.1| Alcohol dehydrogenase (acceptor) [Hyphomicrobium denitrificans
1NES1]
gi|353207516|gb|EHB72924.1| Alcohol dehydrogenase (acceptor) [Hyphomicrobium denitrificans
1NES1]
Length = 719
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 80/341 (23%), Positives = 140/341 (41%), Gaps = 68/341 (19%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFY----AGKDISATPAVANGVVYFPSW 56
WL++ G L+ R++ + INP L+L W+ G I+ATP V N ++
Sbjct: 205 WLSYSGSLDGWRHSKLD-QINPGNASALKLIWAHQFEVPQGGTIAATPLVVNKTIFMSLP 263
Query: 57 NGYLYAVNAFNGALIWE------QNLSKLTGLSGTGIVV-------NVTVAVVVAVSRSN 103
+ A++A G IW NL+ G + G+ V A ++A++
Sbjct: 264 PNSVVALDAETGRKIWRFDYTLPNNLALCCGRTNRGLAVLGDTLFIGTLDAKLIALNAKT 323
Query: 104 GELVWSTQI-DPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNG 162
GE+ W T + D IT + V A +G+S E RG L+ ++G
Sbjct: 324 GEVRWQTTVADANKGYSITAAPLVAKDAVIIGISGGEFGT--------RGFLSAYGAQDG 375
Query: 163 RIIWQTYMLPDNGG-----------KRGGYSGAAVWGSSPAIDVIRRQKQN-----NQTT 206
++ W+ +P G K GG P ++++ N N +
Sbjct: 376 KLRWRFNTIPAPGEFGSETWKNDAWKTGGGPTWVTGSFDPELNLLYWGVGNPSPNYNGSL 435
Query: 207 KPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDA 266
+P +++ NS++AL+ID+G++ W F FT P D
Sbjct: 436 RP-------GDNLFTNSVIALNIDTGKLVWH--------FQFT----------PHDAHDW 470
Query: 267 DFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
D + P+L ++ G R+V+ ++GF + DR +G+ +
Sbjct: 471 DSNQTPILADLTIAGTKRNVICWANRNGFYYVLDRANGEFL 511
>gi|113867864|ref|YP_726353.1| dehydrogenase, PQQ dependent [Ralstonia eutropha H16]
gi|113526640|emb|CAJ92985.1| Dehydrogenase, PQQ dependent [Ralstonia eutropha H16]
Length = 668
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 80/349 (22%), Positives = 138/349 (39%), Gaps = 69/349 (19%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSF--YAGKDISATPAVANGVVYFPSWNG 58
W +HG D R++ I+ VR+L L W++ + + + ATP V +GV+Y +
Sbjct: 20 WPSHGLDYAETRFSRLR-QIDAANVRDLGLVWTYNLESTRGVEATPLVVDGVMYVTASWS 78
Query: 59 YLYAVNAFNGALIW--EQNLSKLTGLSGTGIVVNVTVAV-------------VVAVSRSN 103
++AV+A G +W + + + G G VVN VA+ ++A+ ++
Sbjct: 79 VVHAVDARTGKRLWTFDPKVDRSLGYRGCCDVVNRGVALYQGKVFVAAYDGRLIALDAAS 138
Query: 104 GELVWS--TQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRN 161
G +W T ID + IT + V+ G +G E + RG + D
Sbjct: 139 GRKLWEKDTIIDRKYSYTITGAPRVFKGKVIIGNGGAEYGV--------RGYITAYDAGT 190
Query: 162 GRIIWQTYMLPDNGGK----------------RGGY----SGAAVWGS---SPAIDVIRR 198
G W+ + +P + K G Y G W + P ++++
Sbjct: 191 GEQKWRWFTVPGDPSKPFEDESMAAAAKTWDPSGKYWEAGGGGTAWDTLAFDPELNLMYV 250
Query: 199 QKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDC 258
N + ++Y SIVALD D+G+ W +
Sbjct: 251 GTGNGAPWSRSKRSPAGGDNLYLASIVALDPDTGKYVW------------------HYQE 292
Query: 259 PPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
PG N D + +L + +G+ R V++ K+GF + DR +G I
Sbjct: 293 TPGDNWDYTSTQPMILADLKLDGQMRKVILHAPKNGFFFVIDRTNGKFI 341
>gi|334131568|ref|ZP_08505330.1| PQQ-dependent dehydrogenase [Methyloversatilis universalis FAM5]
gi|333443041|gb|EGK71006.1| PQQ-dependent dehydrogenase [Methyloversatilis universalis FAM5]
Length = 570
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 74/308 (24%), Positives = 123/308 (39%), Gaps = 55/308 (17%)
Query: 25 VRNLRLRWSFYAG--KDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWE------QNL 76
V L+L W+F G + A P V NG ++ + N + + A +G IW L
Sbjct: 62 VDKLQLAWAFSTGMTEGHQAPPIVNNGYMFVATPNNQVICLEAKSGREIWRYKKTIPDEL 121
Query: 77 SKL------TGLSGTGIVVNVTVAVVVAVSRSNGELVWSTQI-DPRPRSQITMSGSVYMG 129
+L L G + + T A +VA+ G+ VW T + D + +T++ G
Sbjct: 122 QQLHPTNRGVALYGDRVYIATTDAFLVALDAKTGKEVWKTAVADWKSGYYMTLAPLAAKG 181
Query: 130 AFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYML-----------PDNGGKR 178
+G S E + RG +A D +G+ W+TY + P + KR
Sbjct: 182 KIMIGSSGGEYGI--------RGFVAAFDADSGKEAWRTYTIAGPGEPGGDSWPGDTYKR 233
Query: 179 GGYSGAAVWGSSPAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAK 238
GG +VW + P D ++YANS++ALD+D+G+
Sbjct: 234 GG---GSVWITGTYDPDTNLAFWGVGNAGPWMADTRSGDNLYANSVLALDVDTGK----- 285
Query: 239 PLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWA 298
L GY ++ + D D AP+L+ + GR +V ++G+ W
Sbjct: 286 -LKGYHQYHHN------------DSWDWDEVSAPLLIDLEHKGRKVKSLVHAGRNGYLWM 332
Query: 299 FDRDSGDI 306
+R +
Sbjct: 333 LERTDSKV 340
>gi|124266070|ref|YP_001020074.1| alcohol dehydrogenase large subunit [Methylibium petroleiphilum
PM1]
gi|124258845|gb|ABM93839.1| alcohol dehydrogenase large subunit [Methylibium petroleiphilum
PM1]
Length = 720
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 85/352 (24%), Positives = 132/352 (37%), Gaps = 73/352 (20%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRW--SFYAGKDISATPAVANGVVYFPSWNG 58
W+ HGG RY+ + IN ++ L+L W F + +TP V +GV+Y S
Sbjct: 50 WMTHGGTYQEARYSPLD-QINTRSIARLKLAWYGDFDTSRGQESTPLVIDGVMYTTSSWS 108
Query: 59 YLYAVNAFNGALIWEQNLSKLTGLSGTGI---VVNVTVAV-------------VVAVSRS 102
+YA +A G L+W + K+ G G VVN VA + A+
Sbjct: 109 KVYAYDAATGKLLWRHD-PKVPGDRGADACCDVVNRGVAAWNGKVYVGTLDGRLEALDAK 167
Query: 103 NGELVWST-QIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRN 161
G+LVWST +D IT + V G +G E + RG ++ D
Sbjct: 168 TGKLVWSTVTVDQTRPYTITGAPRVVKGKVLIGNGGAEYGV--------RGYVSAYDAET 219
Query: 162 GRIIWQTYMLPDNGGKRGGYSGAAV--------W---------GSSPAIDVIRRQKQNNQ 204
G + W+ YM P+ K G + A+ W G D I +Q
Sbjct: 220 GALAWRFYMTPNPENKPDGAASDAILMSKAYGTWHDGAWKQTGGGGTPWDAIVYDTDFDQ 279
Query: 205 TTKPT---------HPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNN 255
T H +++ S++ALD ++G W +
Sbjct: 280 VIIGTGNGNPWSWEHRSGSKGDNLFLGSLLALDAETGAYKW------------------H 321
Query: 256 PDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
P N D + +L ++ GR R ++ K+GF + DR G +I
Sbjct: 322 YQETPSENWDFTSTQPIILTELTLQGRQRKALLHAPKNGFFYVVDRKDGALI 373
>gi|335421099|ref|ZP_08552127.1| methanol/ethanol family PQQ-dependent dehydrogenase [Salinisphaera
shabanensis E1L3A]
gi|334892929|gb|EGM31155.1| methanol/ethanol family PQQ-dependent dehydrogenase [Salinisphaera
shabanensis E1L3A]
Length = 705
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 82/350 (23%), Positives = 134/350 (38%), Gaps = 72/350 (20%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAGKD--ISATPAVANGVVYFPSWNG 58
W+ HGG +R++ + I+ V L L WS+ D + ATP V +GV+Y
Sbjct: 46 WMTHGGTYQEQRFSRLD-QIDQDNVDELGLAWSYRLDIDRGVEATPIVVDGVMYTTGAFS 104
Query: 59 YLYAVNAFNGALIWEQN--LSKLTGLSGTGIVVNVTVAV-------------VVAVSRSN 103
+YA +A G L+W+ + +++ G VN VAV ++A+
Sbjct: 105 VVYAFDAKTGELLWKYDPEVARTAARDGCCGPVNRGVAVWKGKVFVGAFDGRLIALDADT 164
Query: 104 GELVWS--TQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRN 161
G VWS T ID IT + V G +G E + RG + D
Sbjct: 165 GNEVWSVNTLIDEERSQTITGAPRVVKGRVIIGNGGAEMGV--------RGYITAYDADT 216
Query: 162 GRIIWQTYMLP---------------------DNGGKRGGYSGAAVWGS---SPAIDVIR 197
G+ W+ + +P D K+GG G VW S P +D++
Sbjct: 217 GKQAWRFFTVPGDPSKPAESEAMEMARKTWFGDKYWKQGG--GGTVWDSMAYDPELDLLY 274
Query: 198 RQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPD 257
N + +++ SIVA+ ++G W +
Sbjct: 275 IGVGNASLWNRQVRSEGKGDNLFVASIVAIRPETGEYVW------------------HYQ 316
Query: 258 CPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
PG D + L + +G+ R V++ K+GF + DR +G++I
Sbjct: 317 QTPGDQWDFTSTQTITLADLKIDGKTRQVLMQAPKNGFYYVLDRTNGELI 366
>gi|115525524|ref|YP_782435.1| Pyrrolo-quinoline quinone [Rhodopseudomonas palustris BisA53]
gi|115519471|gb|ABJ07455.1| Pyrrolo-quinoline quinone [Rhodopseudomonas palustris BisA53]
Length = 726
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 85/351 (24%), Positives = 140/351 (39%), Gaps = 73/351 (20%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAGKD--ISATPAVANGVVYFPSWNG 58
W ++G D R++ + IN V++L L+WS+ G D + ATP V +G++Y +
Sbjct: 79 WPSYGLDYAETRFSKLD-QINTDNVKSLGLQWSYNLGSDRGVEATPLVVDGIMYVTASWS 137
Query: 59 YLYAVNAFNGALIW--EQNLSKLTGLSGTGIVVNVTVAV-------------VVAVSRSN 103
++AV+ +G IW + +++ +G G VVN VA+ ++A+ +
Sbjct: 138 VVHAVDVRSGKKIWTYDPGVTRESGYKGCCDVVNRGVALHKGKVFVGAYDGRLIALDAAT 197
Query: 104 GELVWS--TQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRN 161
G VW T ID IT + V+ G +G E RG + D
Sbjct: 198 GTRVWEKDTLIDHEHSYTITGAPRVFNGKVVIGNGGAEYGA--------RGYVTAYDAET 249
Query: 162 GRIIWQTYMLP-------------------DNGGK---RGGYSGAAVWGS---SPAIDVI 196
G W+ + +P D GK GG G W + P ++++
Sbjct: 250 GNQAWRWFTVPGDPSKPFEDASMEAAAKTWDAAGKWWINGG--GGTAWDTITFDPDLNMV 307
Query: 197 RRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNP 256
N ++Y SIVAL+ D+G+ W +
Sbjct: 308 YIGTGNGSPWARHLRSPGGGDNLYLGSIVALNADTGQYVW------------------HY 349
Query: 257 DCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
PG N D + +L ++ +GR R VV+ K+GF + DR +G I
Sbjct: 350 QETPGDNWDYTSTQPMILADLTIDGRPRKVVLHAPKNGFFFVIDRTNGKFI 400
>gi|116624491|ref|YP_826647.1| pyrrolo-quinoline quinone [Candidatus Solibacter usitatus
Ellin6076]
gi|116227653|gb|ABJ86362.1| Pyrrolo-quinoline quinone [Candidatus Solibacter usitatus
Ellin6076]
Length = 651
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 74/333 (22%), Positives = 133/333 (39%), Gaps = 51/333 (15%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAGKD--ISATPAVANGVVYFPSWNG 58
W + GD RY I V + +W+F + TP V G++Y S G
Sbjct: 154 WPGYNGDAGGNRYTK-LSQITKANVARMAPKWTFTLPNTGRLQVTPVVVGGIMYV-SGAG 211
Query: 59 YLYAVNAFNGALIWEQNLSKLTG-----------LSGTGIVVNVTVAVVVAVSRSNGELV 107
YA++A G +W G + G + + A V+A++R GEL+
Sbjct: 212 ECYALDAGTGREVWHYRRPSTRGTPGGTTNRGVAVMGDRVFLETDNAHVIALNRFTGELL 271
Query: 108 WSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQ 167
W T++ +S S + +G+ + + E RG +A D G+ +W+
Sbjct: 272 WDTEMADWHQSYFATSAPLAVGSLVIAGTGGGEH-------GARGFVAAFDQATGKEVWR 324
Query: 168 TYMLPDNG--------GKRGGYSGAAVW--GSSPAIDVIRRQKQNNQTTKPTHPDQCISS 217
+ +P G GK + GA W G+ A N + + D+
Sbjct: 325 FWTVPLPGEPGSETWQGKGIAHGGAPTWFTGTYDAESDTIYWPTGNPSAEYNGDDRA-GD 383
Query: 218 DIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTI 277
++Y++ I+ALD +G++ W +D++ D D E P+++
Sbjct: 384 NLYSDCILALDAQTGKLKWHYQGTPHDLW------------------DWDATETPVVIDA 425
Query: 278 STNGRFRDVVVAVQKSGFAWAFDRDSGDIIWFK 310
+ G R +++ ++GF + FDR G ++ K
Sbjct: 426 NWQGHPRKLLLHANRNGFFYVFDRIDGKLLLAK 458
>gi|91977578|ref|YP_570237.1| Pyrrolo-quinoline quinone [Rhodopseudomonas palustris BisB5]
gi|91684034|gb|ABE40336.1| Pyrrolo-quinoline quinone [Rhodopseudomonas palustris BisB5]
Length = 726
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 84/351 (23%), Positives = 139/351 (39%), Gaps = 73/351 (20%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAGKD--ISATPAVANGVVYFPSWNG 58
W ++G D R++ + IN V++L L+WS+ G D + ATP V +G++Y +
Sbjct: 79 WPSYGLDYAETRFSKLD-QINADNVKSLGLQWSYSLGSDRGVEATPVVVDGIMYVTASWS 137
Query: 59 YLYAVNAFNGALIW--EQNLSKLTGLSGTGIVVNVTVAV-------------VVAVSRSN 103
++AV+ G +W + + + G G VVN VA+ +VA+ +
Sbjct: 138 VVHAVDTRTGKKLWTYDPGVDRSKGYRGCCDVVNRGVALYKGKVFVGAYDGRLVALDAAT 197
Query: 104 GELVWS--TQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRN 161
G VW T ID IT + V+ G +G E + RG + D
Sbjct: 198 GAKVWEKDTLIDHEHSYTITGAPRVFNGKVVIGNGGAEYGV--------RGYVTAYDAET 249
Query: 162 GRIIWQTYMLP-------------------DNGGK---RGGYSGAAVWGS---SPAIDVI 196
G W+ + +P D GK GG G W + P ++++
Sbjct: 250 GNQAWRWFTVPGDPSKPFEDASMEAAAKTWDPAGKWWINGG--GGTAWDTITFDPDLNMV 307
Query: 197 RRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNP 256
N + ++Y SIVAL+ D+G+ W +
Sbjct: 308 YIGTGNGSPWNRSLRSPAGGDNLYLGSIVALNADTGKYVW------------------HY 349
Query: 257 DCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
PG N D + +L ++ +G+ R VV+ K+GF + DR +G I
Sbjct: 350 QETPGDNWDYTSTQPMILADLTIDGQPRKVVLHAPKNGFFFVIDRTNGKFI 400
>gi|254480836|ref|ZP_05094082.1| PQQ-dependent dehydrogenase, methanol/ethanol family [marine gamma
proteobacterium HTCC2148]
gi|214038631|gb|EEB79292.1| PQQ-dependent dehydrogenase, methanol/ethanol family [marine gamma
proteobacterium HTCC2148]
Length = 706
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 87/352 (24%), Positives = 142/352 (40%), Gaps = 77/352 (21%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSF--YAGKDISATPAVANGVVYFPSWNG 58
W+++G D + +R++ + ++ TV L L WSF + + AT V +GV+Y S
Sbjct: 49 WMSYGRDYSEQRFSQLDE-VSTKTVDKLGLAWSFDLNTKRGVEATSIVVDGVMYTTSAWS 107
Query: 59 YLYAVNAFNGALIW--EQNLSKLTGLSGTGIVVNVTVAV-------------VVAVSRSN 103
++A++A NG L+W + ++K VN VA+ ++A+ +
Sbjct: 108 IVHALDARNGKLLWTFDPEVAKDKTRHACCDAVNRGVAIWKGQVFLGALDGRLIALDAAT 167
Query: 104 GELVWST-QIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNG 162
G+ WS +DP IT + V G +G E + RG L DV NG
Sbjct: 168 GKTNWSVATVDPELPYTITGAPRVIDGKVLIGNGGAEFGV--------RGFLGAYDVDNG 219
Query: 163 RIIWQTYMLPDN-----------------GGK--RGGYSGAAVWGS---SPAIDVI---- 196
+W+ Y +P N GK G G VW + P ++++
Sbjct: 220 EQLWRFYTVPGNPELGFENEAMELAAKTWNGKWWELGGGGGTVWDAMAYDPELNLLYIGV 279
Query: 197 -RRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNN 255
N + P D +++ +SIVAL D+G W Y T
Sbjct: 280 GNGTPWNREIRSPGGGD-----NLFLSSIVALKPDTGEYVW---------HYQTT----- 320
Query: 256 PDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
PG + D + +L I G+ R V++ K+GF + DR G +I
Sbjct: 321 ----PGESWDYTATQHIILADIPIEGKERKVLMQAPKNGFFYVLDRTDGSLI 368
>gi|294010187|ref|YP_003543647.1| alcohol dehydrogenase large subunit [Sphingobium japonicum UT26S]
gi|292673517|dbj|BAI95035.1| alcohol dehydrogenase large subunit [Sphingobium japonicum UT26S]
Length = 699
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 82/356 (23%), Positives = 145/356 (40%), Gaps = 75/356 (21%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAG--KDISATPAVANGVVYFPSWNG 58
WL +GG N Y+ + IN TV++L+ WSF + + P V +GV+Y +
Sbjct: 45 WLVNGGTFNGDHYSKLD-QINVNTVKDLKPAWSFDFDTVRGQQSEPLVVDGVMYVSTSWS 103
Query: 59 YLYAVNAFNGALIW--EQNLSKLTGLSGTGIVVNVTVAV-------------VVAVSRSN 103
+YA++A G IW + + TG+ VN VAV ++A+S
Sbjct: 104 KVYALDAATGRQIWFFDPMVPGDTGVKVCCDTVNRGVAVYKGKVYVGTLDGRLIAISART 163
Query: 104 GELVWSTQ-IDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNG 162
G +WST+ +DP+ IT + V +G + + + RG ++ D G
Sbjct: 164 GTQLWSTRTVDPKSALTITGAPRVIHDKVIIGNAGADFGV--------RGYVSAYDAATG 215
Query: 163 RIIWQTYMLPDNGGK-------------------RGGYS----GAAVWGS---SPAIDVI 196
+++W+ Y +P + K G Y+ G W + P ++ +
Sbjct: 216 KLVWRFYTVPGDPAKGPDHAASDEIMEKLVRPTWSGDYAKYGGGGTAWHAISYDPELNQL 275
Query: 197 RRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNP 256
N P + +++ S++ALD D+G+ W
Sbjct: 276 YIGTGNGSPWNPKYRTAGKGDNLFLCSVIALDPDTGKYIW-------------------- 315
Query: 257 DCPPGPNLDADFGEA-PMLL-TISTNGRFRDVVVAVQKSGFAWAFDRDSGDIIWFK 310
P D+ + PM+L ++ +G+ R V++ K+GF + DR +G +I K
Sbjct: 316 HYQENPQEAWDYNSSQPMILGNLTIDGKIRKVLMHAPKNGFFYVLDRTNGKVISAK 371
>gi|377811361|ref|YP_005043801.1| PQQ-dependent dehydrogenase [Burkholderia sp. YI23]
gi|357940722|gb|AET94278.1| PQQ-dependent dehydrogenase, methanol/ethanol family [Burkholderia
sp. YI23]
Length = 579
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 76/321 (23%), Positives = 126/321 (39%), Gaps = 58/321 (18%)
Query: 20 INPVTVRNLRLRWSFYAGKDI----SATPAVANGVVYFPSWNGYLYAVNAFNGALIW--E 73
I+ V+ L+ WS+ K++ ATP V ++ + +YA +A G +W E
Sbjct: 74 IDTSNVKGLKQVWSYKFPKELQQGFEATPIVNGRYLFVTTPKDNVYAFDAATGKQLWKYE 133
Query: 74 QNLSKLTGLSGTGIVVNVTVAV-------------VVAVSRSNGELVWSTQI-DPRPRSQ 119
NL + + V+N VA+ V A+ G LVW + DP
Sbjct: 134 PNLDARSFKTACCDVINRGVALYGKNVYVAMLNGEVAALDAQTGALVWKKAMFDPGVGYA 193
Query: 120 ITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNGGKRG 179
+++ GA VG S E RG +A LD +G+++W+ Y +P G K
Sbjct: 194 FSLAPLALDGALVVGSSGGEYGA--------RGFIAALDPNDGKVLWKRYTVP--GAKEP 243
Query: 180 G----------YSGAAVWGSSPAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDI 229
G + GA W + R P D ++Y++S++ALD
Sbjct: 244 GGNTWPDGMQEHGGAPAWLTGTYDAKSRTLYWGVGNPGPWLADLRPGDNLYSDSLLALDP 303
Query: 230 DSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVA 289
+G + W +D + D D P+L I G+ D ++
Sbjct: 304 KTGDLKWHYQYTTHDTW------------------DYDGVNTPVLANIKYQGKDYDAIIH 345
Query: 290 VQKSGFAWAFDRDSGDIIWFK 310
++GF A DR +G +I+ +
Sbjct: 346 ADRNGFFHAIDRSNGKLIYAR 366
>gi|386289477|ref|ZP_10066607.1| pyrrolo-quinoline quinone [gamma proteobacterium BDW918]
gi|385277540|gb|EIF41522.1| pyrrolo-quinoline quinone [gamma proteobacterium BDW918]
Length = 701
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 81/349 (23%), Positives = 139/349 (39%), Gaps = 72/349 (20%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAG--KDISATPAVANGVVYF-PSWN 57
W HGG +R++ I+P + L L W+F G + I ATP V +GV+Y +WN
Sbjct: 43 WTKHGGGDAEQRFS-PLAQISPDNISQLGLAWAFDLGVSRGIEATPLVVDGVIYVTATWN 101
Query: 58 GYLYAVNAFNGALIWEQN---------------LSKLTGLSGTGIVVNVTVAVVVAVSRS 102
+ A++A GAL W+ + +++ + I+ ++A+
Sbjct: 102 -KVSALDAKTGALRWQYDPKVDRSKAADLCCDAVNRGVAYADGKIITGTIDGRLLALDAK 160
Query: 103 NGELVWST-QIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRN 161
G +W T +D IT + + ++G E + RG ++ D+
Sbjct: 161 TGVKLWDTITVDQSQPYTITGAPRIVRDKVFIGNGGAEYGV--------RGYVSAYDINT 212
Query: 162 GRIIWQTYMLPDNGG--------------------KRGGYSGAAVWGS---SPAIDVIRR 198
G ++W+ Y +P N K GG G VW S P +D++
Sbjct: 213 GALLWRFYTVPGNPADGAESPAMAKAAETWKGEWWKFGG--GGTVWDSMAYDPELDLLYI 270
Query: 199 QKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDC 258
N + ++Y +SIVAL D+G W Y T
Sbjct: 271 GVGNGSPWNQSIRSPGGGDNLYLSSIVALRPDTGEYVW---------HYQTT-------- 313
Query: 259 PPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
PG D + +L ++ +G+ R V++ K+GF + DR SG+++
Sbjct: 314 -PGETWDYTATQHMILADVNIDGKARKVIMQAPKNGFFYVIDRVSGELL 361
>gi|390958606|ref|YP_006422363.1| glucose dehydrogenase [Terriglobus roseus DSM 18391]
gi|390413524|gb|AFL89028.1| glucose dehydrogenase [Terriglobus roseus DSM 18391]
Length = 536
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 82/337 (24%), Positives = 138/337 (40%), Gaps = 59/337 (17%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAG-----KDISATPAVANGVVYFPS 55
W GD + +R++ I+P V + L W+F G + +TP + +GV+YF +
Sbjct: 49 WPGFHGDYSGQRHS-PLTEISPANVSQMTLAWTFQTGLGGGGNTMKSTPILVDGVLYF-T 106
Query: 56 WNGYLYAVNAFNGALIWE----QNLSKLTGLSGTGIVVN-----VTVAVVVAVSRSNGEL 106
+++AV+A G IW N + G G ++ + + A V A+ G++
Sbjct: 107 MPDHVWAVDARTGHTIWHYAAPPNKAFHIGQRGVSMLKDKLYYMTSDAHVEALDAKTGKV 166
Query: 107 VWSTQIDPRPRSQ-ITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRII 165
+W + + Q TMS + VG S + L +G L LD G+
Sbjct: 167 LWDVMVADSNKGQWSTMSPLIVGNHVMVGASGDFDNL--------QGFLRSLDPETGKTQ 218
Query: 166 WQTYMLPDNGGKRGGYSGAAVWGS---SPAIDVIRRQKQN-----NQTTKPTHPDQCISS 217
WQ P G + SG +W + P +++ N N T +P
Sbjct: 219 WQWDATPPVGTPKM-TSGGNIWMTGTYDPEQNLMFWGTGNPTPVLNGTVRP-------GD 270
Query: 218 DIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTI 277
++Y SIVALD ++G++ WA +D D D E P+L +
Sbjct: 271 NLYTCSIVALDPETGKLKWAFQPSPHDTH------------------DWDAVEIPVLADV 312
Query: 278 STNGRFRDVVVAVQKSGFAWAFDRDSGDIIWFKLAGP 314
+ G+ R V++ ++G + DR +G I GP
Sbjct: 313 TVEGKPRKVLMQASRNGHFFVIDRVTGKSILTTTFGP 349
>gi|134100982|ref|YP_001106643.1| quinoprotein ethanol dehydrogenase [Saccharopolyspora erythraea
NRRL 2338]
gi|291003401|ref|ZP_06561374.1| quinoprotein ethanol dehydrogenase precursor [Saccharopolyspora
erythraea NRRL 2338]
gi|133913605|emb|CAM03718.1| probable quinoprotein ethanol dehydrogenase precursor
[Saccharopolyspora erythraea NRRL 2338]
Length = 562
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 77/335 (22%), Positives = 129/335 (38%), Gaps = 60/335 (17%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAGK----------DISATPAVANGV 50
WL + G + +RY+ + IN V L W F +G A P V +GV
Sbjct: 46 WLTYYGAYDGQRYSPLD-QINTENVHRLVPAWVFQSGSAGMHAGPSTYSFEAAPIVVDGV 104
Query: 51 VYFPSWNGYLYAVNAFNGALIWEQ-------------NLSKLTGLSGTGIVVNVTVAVVV 97
+Y W+G++++++A G +W N+++ ++ + V A V+
Sbjct: 105 MYVSGWDGWVWSIDARTGQELWRYKHEVPYDTSLCCGNVNRGVAVAKGKVFVVTLNAHVI 164
Query: 98 AVSRSNGELVW-STQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAK 156
A+ G+ +W S D R T++ V VG S E + RG L
Sbjct: 165 ALDAVTGKCLWDSIYGDVRAGESATVAPLVVKDMVVVGSSGGEFGV--------RGHLDA 216
Query: 157 LDVRNGRIIWQTYMLPDNGGKRGGYSGAAVWGSSPAIDVIRRQKQNNQTTKPTHPDQCI- 215
D+ GR +W+TY +P + G G+ W PA R N T P+ +
Sbjct: 217 FDLETGRHVWRTYTIP-----KPGEPGSETWPEGPAW---TRGGGNCWVTGTFDPELNLM 268
Query: 216 -----------------SSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDC 258
++Y +S++A+D D+G I W +D++ + + N
Sbjct: 269 YWGTGNPAPDFDGGVREGDNLYTDSVIAVDPDNGEIRWHYQYNPHDLWDYDSTMENILFD 328
Query: 259 PPGPNLDADFGEAPMLLTIS-TNGRFRDVVVAVQK 292
G L F + + TNG VV V +
Sbjct: 329 QDGRKLLGHFDKNGYFFVLDRTNGELVRVVPFVDR 363
>gi|27805670|sp|Q46444.1|QHED_COMTE RecName: Full=Quinohemoprotein ethanol dehydrogenase type-1;
AltName: Full=Alcohol dehydrogenase (azurin); AltName:
Full=QH-EDH1; AltName: Full=Quinohemoprotein ethanol
dehydrogenase type I; Flags: Precursor
gi|663196|emb|CAA57464.1| quinohaemoprotein ethanol dehydrogenase [Comamonas testosteroni]
Length = 708
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 80/349 (22%), Positives = 135/349 (38%), Gaps = 69/349 (19%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSF--YAGKDISATPAVANGVVYFPSWNG 58
W G D RY+ + IN V++L L WS+ + + + ATP V +G++Y +
Sbjct: 60 WPTIGVDYAETRYSRLD-QINAANVKDLGLAWSYNLESTRGVEATPVVVDGIMYVSASWS 118
Query: 59 YLYAVNAFNGALIW--EQNLSKLTGLSGTGIVVNVTVAV-------------VVAVSRSN 103
++A++ G IW + + + TG G VVN VA+ ++A+ +
Sbjct: 119 VVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALWKGKVYVGAWDGRLIALDAAT 178
Query: 104 GELVWSTQIDPRPRSQITMSGS--VYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRN 161
G+ VW + +T++G+ V+ G +G E + RG + D
Sbjct: 179 GKEVWHQNTFEGQKGSLTITGAPRVFKGKVIIGKRGAEYGV--------RGYITAYDAET 230
Query: 162 GRIIWQTYMLP--------DNGGKRGGYS------------GAAVWGSSPAIDVIRRQKQ 201
G W+ + +P D KR + G +W S +
Sbjct: 231 GERKWRWFSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELNTMYV 290
Query: 202 NNQTTKP-THPDQCIS--SDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDC 258
P +H + ++Y SIVALD D+G+ W +
Sbjct: 291 GTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKW------------------HYQE 332
Query: 259 PPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
PG N D + +L I G+ R V++ K+GF + DR +G I
Sbjct: 333 TPGDNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFI 381
>gi|390959812|ref|YP_006423569.1| glucose dehydrogenase [Terriglobus roseus DSM 18391]
gi|390414730|gb|AFL90234.1| glucose dehydrogenase [Terriglobus roseus DSM 18391]
Length = 550
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 78/337 (23%), Positives = 137/337 (40%), Gaps = 62/337 (18%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFY------AGKDISATPAVANGVVYF- 53
W + GD + RR++ I P T+ L+L W+F G+ ISATP NGV+YF
Sbjct: 62 WTTYNGDYSGRRFS-PLTKITPATIDKLKLAWTFRVTTTTGGGRRISATPLEVNGVLYFT 120
Query: 54 -PSWNGYLYAVNAFNGALIWEQNLSKLTG---------LSGTGIVVNVTVAVVVAVSRSN 103
PS +++AV+A G +W+ + G + GT + +VA+ +
Sbjct: 121 VPS---HVWAVDARTGTQLWQFDWPSKGGETIGNRGVAVQGTTVYFETEDCNLVALDIAT 177
Query: 104 GELVWSTQI-DPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNG 162
G+ W I +P +++ + VG+S + +P G + D G
Sbjct: 178 GKEKWHATIGNPDQFYFGSVAPVIVKNHVMVGVSGDDFDIP--------GYIEAHDPETG 229
Query: 163 RIIWQTYMLPDNGGKRGG---------YSGAAVWGS---SPAIDVIRRQKQNNQTTKPTH 210
+ W+ Y P+ G + G W + P +++ N Q +
Sbjct: 230 ALQWRWYTHPEPGTPEAKTWPNDEAMLHGGGMTWVAGTYDPQLNLYYFGTGNAQPV--IN 287
Query: 211 PDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGE 270
D +++ ++I AL+ D+G++ W YF PN P D D +
Sbjct: 288 GDARPGDNLFTSTICALNPDTGKLVW----------YFQ---PN-----PHDTHDWDAVQ 329
Query: 271 APMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
P+L+ G+ R +V ++G+ + DR G +
Sbjct: 330 TPVLIDTVIAGKPRKLVAQASRNGWYFLLDRTDGKAL 366
>gi|90417155|ref|ZP_01225083.1| Pyrrolo-quinoline quinone [gamma proteobacterium HTCC2207]
gi|90331171|gb|EAS46427.1| Pyrrolo-quinoline quinone [marine gamma proteobacterium HTCC2207]
Length = 738
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 84/347 (24%), Positives = 138/347 (39%), Gaps = 59/347 (17%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSF--YAGKDISATPAVANGVVYFPSWNG 58
WL++G D +R++ + +N V L L WSF + + ATP V NGV+Y +
Sbjct: 40 WLSYGRDYQEQRFSPLDN-VNRDNVDQLDLAWSFKFETARGMEATPLVHNGVIYVSTGWS 98
Query: 59 YLYAVNAFNGALIW--EQNLSKLTGLSGTGIVVNVTVAV-------------------VV 97
+ YA++A G +W + + K + VN VA+ ++
Sbjct: 99 HAYALDARTGDELWHFDAKVPKSHLIKTCCGPVNRGVAIWQEDENSPLQVFLGALDGRLI 158
Query: 98 AVSRSNGELVWSTQIDPRPRSQITMSGS--VYMGAFYVGLSSLEEALPADQCCTFRGSLA 155
A+ GE WS Q P P S +++G+ V G +G E RG ++
Sbjct: 159 ALDALTGEQNWSVQTTP-PDSNYSITGAPRVVKGMVVIGNGGAE--------LGVRGYVS 209
Query: 156 KLDVRNGRIIWQTYMLPDNGGKRGGYSGAAVWGSSPAIDVIRRQKQNNQ--TTKPTHPDQ 213
DV G W+ Y +P + K SPA++ ++ T
Sbjct: 210 AFDVNTGEQKWRFYTVPGDRNKP---------QESPALEAALETWNGDEYYTVGGGGGGT 260
Query: 214 CISSDIYANSIVALDIDSGRIA-WAKPL---GGYDIFYFTCLVPNNPD---------CPP 260
S +Y + L I +G + W + L GG D Y + +V PD P
Sbjct: 261 AWDSLVYDPELDLLYIGTGNGSPWNRDLRSPGGGDNLYLSSIVALKPDTGEYVWHYQVTP 320
Query: 261 GPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
N D + +L + G R V++ K+GF + DR +G+++
Sbjct: 321 RDNWDYTATQQLVLAELELEGETRKVIMQAPKNGFFYVLDRVTGELL 367
>gi|9255865|gb|AAF86335.1| terahydrofurfuryl alcohol dehydrogenase [Cupriavidus necator]
Length = 698
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 82/349 (23%), Positives = 138/349 (39%), Gaps = 69/349 (19%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSF--YAGKDISATPAVANGVVYFPSWNG 58
W ++G D R++ E +N VRNL L WS+ + + + ATP V +GV+Y +
Sbjct: 49 WPSYGLDYAETRFSKLE-QVNAGNVRNLGLAWSYDLESTRGVEATPLVVDGVMYVSAPWS 107
Query: 59 YLYAVNAFNGALIW--EQNLSKLTGLSGTGIVVNVTVAV-------------VVAVSRSN 103
++A++A G +W + + + G VVN VA+ +VA+ +
Sbjct: 108 VVHAIDARTGKRLWTYDPQVPRDQAYKGCCDVVNRGVALYQGKVFVGAFDGRLVAIDAAT 167
Query: 104 GELVWS--TQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRN 161
G+ VW T +D IT + VY G +G E + RG + D
Sbjct: 168 GKKVWEQDTIVDRSKSYTITGAPRVYNGKVIIGNGGAEYGV--------RGYITAYDAET 219
Query: 162 GRIIWQTYMLPDNGGK----------------RGGY----SGAAVWGS---SPAIDVIRR 198
G+ W+ Y +P + + G Y G VW + P ++++
Sbjct: 220 GKQQWRWYTVPGDPARPFENEAMAKAAATWDPSGKYWINGGGGTVWNTMAFDPELNLMYI 279
Query: 199 QKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDC 258
N ++YA S+VAL+ D+G W +
Sbjct: 280 GTGNAGPWSRKLRSPKGGDNLYAASVVALNPDTGEYVW------------------HYQE 321
Query: 259 PPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
PG N D + +L + +G+ R V++ K+GF + DR +G I
Sbjct: 322 TPGDNWDYTSTQDIILADLKIDGQPRKVILHAPKNGFFFVIDRTNGKFI 370
>gi|148253529|ref|YP_001238114.1| quinoprotein ethanol dehydrogenase [Bradyrhizobium sp. BTAi1]
gi|146405702|gb|ABQ34208.1| Putative Quinoprotein ethanol dehydrogenase [Bradyrhizobium sp.
BTAi1]
Length = 592
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 80/356 (22%), Positives = 148/356 (41%), Gaps = 82/356 (23%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAGK----------DISATPAVANGV 50
WL+H + + R++ + IN V+NL++ W+ + G + TP V NG+
Sbjct: 49 WLHHHKNYSGTRFSALKE-INKDNVKNLKVAWTMHLGGVEGGGIWSHGGLEGTPIVENGM 107
Query: 51 VYFPSWNGYLYAVNAF--NGALIWEQNL----------------SKLTGLSGTGIVVNVT 92
+Y G +Y ++A G L+W+ + ++ L G ++ +
Sbjct: 108 IYVTDGWGSVYKIDARGGKGQLVWKMDPKTDHDWAGAIACCGVDNRGVALWGNLVISHTL 167
Query: 93 VAVVVAVSRSNGELVWSTQI-DPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFR 151
++A ++ G++ W Q+ DP IT + + G++ E + R
Sbjct: 168 DGRLIATNKETGQVAWQRQVADPDKGEVITGAPLIVKNMAVSGVAGAEYGI--------R 219
Query: 152 GSLAKLDVRNGRIIWQTYMLPDNGG------KRGGYSGAAVWGSS-------PAIDVIRR 198
G +A D+ + + +W+T+ +P G K + AA GS+ PA D I
Sbjct: 220 GWIAATDLTSQKEVWRTHTIPAKGEPGSETWKDSNDAAAAGGGSTWVTGTYDPATDTIIW 279
Query: 199 QKQN-----NQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVP 253
N + +P ++Y +S +ALD ++G+I W + T P
Sbjct: 280 GVGNPGPDWDNAYRP-------GDNLYTDSSLALDANTGKIKWH--------YQHT---P 321
Query: 254 NNPDCPPGPNLDADFGEAPMLLTI-STNGRFRDVVVAVQKSGFAWAFDRDSGDIIW 308
N+P D D +L+ + + NG + + ++GFA+A DR +G IW
Sbjct: 322 NDP-------YDYDSVAENVLVDVPAPNGSTLKLALEADRNGFAYAIDRTNGKFIW 370
>gi|329897139|ref|ZP_08271882.1| Alcohol dehydrogenase large subunit [gamma proteobacterium
IMCC3088]
gi|328921397|gb|EGG28788.1| Alcohol dehydrogenase large subunit [gamma proteobacterium
IMCC3088]
Length = 719
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 88/354 (24%), Positives = 139/354 (39%), Gaps = 81/354 (22%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFY--AGKDISATPAVANGVVYFPSWNG 58
WL++G D +RY+ I VR+L L W + + + ATP VANGV+Y
Sbjct: 40 WLSYGRDYQEQRYS-PLAQIKTDNVRDLGLAWFMDTDSNRGLEATPLVANGVMYVSGSWS 98
Query: 59 YLYAVNAFNGALIW--EQNLSKLTGLSGTGIVVNVTVAV-------------VVAVSRSN 103
+YA++A G +W + + K G VVN VA+ ++A+ ++N
Sbjct: 99 VVYALDAKTGERLWSFDPEVDKAYGKRACCDVVNRGVALYDDKVIFGTLDGRLIALDKAN 158
Query: 104 GELVWSTQIDPRPRSQITMSGS--VYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRN 161
G +VWS + +++G+ G Y+G E + RG ++ V
Sbjct: 159 GAIVWSVSTIAGEQGSYSITGAPRAANGLVYIGNGGAEYGV--------RGFVSAYSVAT 210
Query: 162 GRIIWQTYMLPDNGGKRGGYS--------------------GAAVWGS--------SPAI 193
G ++W+ Y +P G G+ G VW S I
Sbjct: 211 GELVWRFYTVP--GNPELGFENDAMKVAAQTWTGEWWSLGGGGTVWDSIVYDHEFDQVLI 268
Query: 194 DVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVP 253
V N + P D ++Y +S+VALD +G W F T
Sbjct: 269 GVGNGSPWNRRVRSPEGGD-----NLYLSSVVALDAVTGEYRWH--------FQET---- 311
Query: 254 NNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
PG + D + ML + +G R V+ K+GF + DR SG++I
Sbjct: 312 ------PGDSWDYTATQHIMLADMEIDGLTRKVLWHAPKNGFFFIIDRASGELI 359
>gi|221069569|ref|ZP_03545674.1| PQQ-dependent dehydrogenase, methanol/ethanol family [Comamonas
testosteroni KF-1]
gi|220714592|gb|EED69960.1| PQQ-dependent dehydrogenase, methanol/ethanol family [Comamonas
testosteroni KF-1]
Length = 708
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 80/349 (22%), Positives = 135/349 (38%), Gaps = 69/349 (19%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSF--YAGKDISATPAVANGVVYFPSWNG 58
W G D RY+ + IN V++L L WS+ + + + ATP V +G++Y +
Sbjct: 60 WPTIGVDYAETRYSRLD-QINAANVKDLGLAWSYNLESTRGVEATPVVVDGIMYVSASWS 118
Query: 59 YLYAVNAFNGALIW--EQNLSKLTGLSGTGIVVNVTVAV-------------VVAVSRSN 103
++A++ G IW + + + TG G VVN VA+ ++A+ +
Sbjct: 119 VVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALWKGKVYVGAWDGRLIALDAAT 178
Query: 104 GELVWSTQIDPRPRSQITMSGS--VYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRN 161
G+ VW + +T++G+ V+ G +G E + RG + D
Sbjct: 179 GKEVWHQNTFEGQKGSLTITGAPRVFKGKVIIGNGGAEYGV--------RGYITAYDAET 230
Query: 162 GRIIWQTYMLP--------DNGGKRGGYS------------GAAVWGSSPAIDVIRRQKQ 201
G W+ + +P D KR + G +W S +
Sbjct: 231 GERKWRWFSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELNTMYV 290
Query: 202 NNQTTKP-THPDQCIS--SDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDC 258
P +H + ++Y SIVALD D+G+ W +
Sbjct: 291 GTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKW------------------HYQE 332
Query: 259 PPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
PG N D + +L I G+ R V++ K+GF + DR +G I
Sbjct: 333 TPGDNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFI 381
>gi|398856577|ref|ZP_10612298.1| PQQ-dependent dehydrogenase, methanol/ethanol family [Pseudomonas
sp. GM79]
gi|398243192|gb|EJN28788.1| PQQ-dependent dehydrogenase, methanol/ethanol family [Pseudomonas
sp. GM79]
Length = 698
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 85/353 (24%), Positives = 141/353 (39%), Gaps = 79/353 (22%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRN---LRLRWSFYAG--KDISATPAVANGVVYFP- 54
WL+HG + +R++ ++ +T +N L L WS + + ATP A+GV+Y
Sbjct: 42 WLSHGRTYDEQRFS----PLDQITAQNAGKLGLAWSLDLDNHRGLEATPLFADGVLYTSL 97
Query: 55 SWNGYLYAVNAFNGALIW--EQNLSKLTGLSGTGIVVNVTVAV-------------VVAV 99
SW+ + AV+A G +W + +++ G VN VA+ ++A+
Sbjct: 98 SWSRAM-AVDARTGKTLWTFDPQIARDKGRDACCDAVNRGVALWNGKVFIGTLDGRLIAL 156
Query: 100 SRSNGELVWSTQI-DPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLD 158
G+ VWS Q D IT + V G +G E + RG + D
Sbjct: 157 DAKTGKQVWSQQTTDNSKPYTITGAPRVVKGKVIIGNGGAEYGV--------RGYFSAYD 208
Query: 159 VRNGRIIWQTYMLP---------------------DNGGKRGGYSGAAVWGS---SPAID 194
+G++ W+ Y +P D K GG G VW P +D
Sbjct: 209 AESGKMAWRFYTVPGDPNKPYEHPELADAAKTWKGDEYWKLGG--GGTVWDGMAYDPELD 266
Query: 195 VIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPN 254
++ N ++Y +SI+AL+ DSGR+AW
Sbjct: 267 LLYVGTGNGSPWNRELRSPGGGDNLYLSSILALNPDSGRLAW------------------ 308
Query: 255 NPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
+ PG + D + L T+ G+ R V++ K+GF + DR +G ++
Sbjct: 309 HYQVTPGDSWDFTATQQITLATLEIGGKPRKVLMQAPKNGFFYVIDRQTGGLL 361
>gi|299533810|ref|ZP_07047181.1| Pyrrolo-quinoline quinone [Comamonas testosteroni S44]
gi|298718226|gb|EFI59212.1| Pyrrolo-quinoline quinone [Comamonas testosteroni S44]
Length = 708
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 80/349 (22%), Positives = 135/349 (38%), Gaps = 69/349 (19%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSF--YAGKDISATPAVANGVVYFPSWNG 58
W G D RY+ + IN V++L L WS+ + + + ATP V +G++Y +
Sbjct: 60 WPTIGVDYAETRYSRLD-QINATNVKDLGLAWSYNLESTRGVEATPVVVDGIMYVSASWS 118
Query: 59 YLYAVNAFNGALIW--EQNLSKLTGLSGTGIVVNVTVAV-------------VVAVSRSN 103
++A++ G IW + + + TG G VVN VA+ ++A+ +
Sbjct: 119 VVHAIDTRTGNRIWTYDPQVDRSTGFKGCCDVVNRGVALWKGKVFVGAWDGRLIALDAAT 178
Query: 104 GELVWSTQIDPRPRSQITMSGS--VYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRN 161
G+ VW + +T++G+ V+ G +G E + RG + D
Sbjct: 179 GKEVWQKNTFEGQKGSLTITGAPRVFKGKVIIGNGGAEYGV--------RGYITAYDAET 230
Query: 162 GRIIWQTYMLP--------DNGGKRGGYS------------GAAVWGSSPAIDVIRRQKQ 201
G W+ + +P D KR + G +W S +
Sbjct: 231 GEQKWRWFSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELNTMYV 290
Query: 202 NNQTTKP-THPDQCIS--SDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDC 258
P +H + ++Y SIVALD D+G+ W +
Sbjct: 291 GTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKW------------------HYQE 332
Query: 259 PPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
PG N D + +L I G+ R V++ K+GF + DR +G I
Sbjct: 333 TPGDNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFI 381
>gi|418528075|ref|ZP_13094025.1| pyrrolo-quinoline quinone [Comamonas testosteroni ATCC 11996]
gi|371454451|gb|EHN67453.1| pyrrolo-quinoline quinone [Comamonas testosteroni ATCC 11996]
Length = 708
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 80/349 (22%), Positives = 135/349 (38%), Gaps = 69/349 (19%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSF--YAGKDISATPAVANGVVYFPSWNG 58
W G D RY+ + IN V++L L WS+ + + + ATP V +G++Y +
Sbjct: 60 WPTVGVDYAETRYSRLD-QINAANVKDLGLAWSYNLESTRGVEATPVVVDGIMYVSASWS 118
Query: 59 YLYAVNAFNGALIW--EQNLSKLTGLSGTGIVVNVTVAV-------------VVAVSRSN 103
++A++ G IW + + + TG G VVN VA+ ++A+ +
Sbjct: 119 VVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALWKGKVYVGAWDGRLIALDAAT 178
Query: 104 GELVWSTQIDPRPRSQITMSGS--VYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRN 161
G+ VW + +T++G+ V+ G +G E + RG + D
Sbjct: 179 GKEVWHKNTFEGQKGSLTITGAPRVFKGKVIIGNGGAEYGV--------RGYITAYDAET 230
Query: 162 GRIIWQTYMLP--------DNGGKRGGYS------------GAAVWGSSPAIDVIRRQKQ 201
G W+ + +P D KR + G +W S +
Sbjct: 231 GEQKWRWFSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELNTMYV 290
Query: 202 NNQTTKP-THPDQCIS--SDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDC 258
P +H + ++Y SIVALD D+G+ W +
Sbjct: 291 GTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKW------------------HYQE 332
Query: 259 PPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
PG N D + +L I G+ R V++ K+GF + DR +G I
Sbjct: 333 TPGDNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFI 381
>gi|264676333|ref|YP_003276239.1| pyrrolo-quinoline quinone [Comamonas testosteroni CNB-2]
gi|262206845|gb|ACY30943.1| Pyrrolo-quinoline quinone [Comamonas testosteroni CNB-2]
Length = 708
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 80/349 (22%), Positives = 135/349 (38%), Gaps = 69/349 (19%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSF--YAGKDISATPAVANGVVYFPSWNG 58
W G D RY+ + IN V++L L WS+ + + + ATP V +G++Y +
Sbjct: 60 WPTIGVDYAETRYSRLD-QINAANVKDLGLAWSYNLESTRGVEATPVVVDGIMYVSASWS 118
Query: 59 YLYAVNAFNGALIW--EQNLSKLTGLSGTGIVVNVTVAV-------------VVAVSRSN 103
++A++ G IW + + + TG G VVN VA+ ++A+ +
Sbjct: 119 VVHAIDTRTGNRIWTYDPQVDRSTGFKGCCDVVNRGVALWKGKVFVGAWDGRLIALDAAT 178
Query: 104 GELVWSTQIDPRPRSQITMSGS--VYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRN 161
G+ VW + +T++G+ V+ G +G E + RG + D
Sbjct: 179 GKEVWQKNTFEGQKGSLTITGAPRVFKGKVIIGNGGAEYGV--------RGYITAYDAET 230
Query: 162 GRIIWQTYMLP--------DNGGKRGGYS------------GAAVWGSSPAIDVIRRQKQ 201
G W+ + +P D KR + G +W S +
Sbjct: 231 GEQKWRWFSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELNTMYV 290
Query: 202 NNQTTKP-THPDQCIS--SDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDC 258
P +H + ++Y SIVALD D+G+ W +
Sbjct: 291 GTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKW------------------HYQE 332
Query: 259 PPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
PG N D + +L I G+ R V++ K+GF + DR +G I
Sbjct: 333 TPGDNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFI 381
>gi|456357365|dbj|BAM91810.1| quinoprotein ethanol dehydrogenase [Agromonas oligotrophica S58]
Length = 592
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 79/356 (22%), Positives = 147/356 (41%), Gaps = 82/356 (23%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAGK----------DISATPAVANGV 50
WL+H + + R++ + IN V+NL++ W+ + G + TP V NG+
Sbjct: 49 WLHHHKNYSGTRFSALKE-INKDNVKNLKVAWTMHLGGVEGGGIWSHGGLEGTPIVENGM 107
Query: 51 VYFPSWNGYLYAVNAF--NGALIWEQNL----------------SKLTGLSGTGIVVNVT 92
+Y G +Y ++A G ++W+ + ++ L G ++ +
Sbjct: 108 IYVTDGWGSVYKIDARGGKGQMVWKMDPKTDHDWAGAIACCGVDNRGVALWGNLVISHTL 167
Query: 93 VAVVVAVSRSNGELVWSTQI-DPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFR 151
++A ++ G++ W Q+ DP IT + + G++ E + R
Sbjct: 168 DGRLIATNKETGQVAWQRQVADPDKGEVITGAPLIVKNMAVSGVAGAEYGI--------R 219
Query: 152 GSLAKLDVRNGRIIWQTYMLPDNGG------KRGGYSGAAVWGSS-------PAIDVIRR 198
G +A D+ + +W+T+ +P G K + AA GS+ P+ D I
Sbjct: 220 GWIAATDLSTQKEVWRTHTIPAKGEPGSETWKDSNDAAAAGGGSTWVTGTYDPSTDTIIW 279
Query: 199 QKQN-----NQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVP 253
N + +P ++Y +S +ALD ++G+I W + T P
Sbjct: 280 GVGNPGPDWDNAYRP-------GDNLYTDSSLALDANTGKIKWH--------YQHT---P 321
Query: 254 NNPDCPPGPNLDADFGEAPMLLTI-STNGRFRDVVVAVQKSGFAWAFDRDSGDIIW 308
N+P D D +L+ + + NG + + ++GFA+A DR SG IW
Sbjct: 322 NDP-------YDYDSVAENVLVDVPAPNGSTLKLALEADRNGFAYAIDRTSGKFIW 370
>gi|18158809|pdb|1KB0|A Chain A, Crystal Structure Of Quinohemoprotein Alcohol
Dehydrogenase From Comamonas Testosteroni
Length = 677
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 80/349 (22%), Positives = 135/349 (38%), Gaps = 69/349 (19%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSF--YAGKDISATPAVANGVVYFPSWNG 58
W G D RY+ + IN V++L L WS+ + + + ATP V +G++Y +
Sbjct: 29 WPTIGVDYAETRYSRLD-QINAANVKDLGLAWSYNLESTRGVEATPVVVDGIMYVSASWS 87
Query: 59 YLYAVNAFNGALIW--EQNLSKLTGLSGTGIVVNVTVAV-------------VVAVSRSN 103
++A++ G IW + + + TG G VVN VA+ ++A+ +
Sbjct: 88 VVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALWKGKVYVGAWDGRLIALDAAT 147
Query: 104 GELVWSTQIDPRPRSQITMSGS--VYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRN 161
G+ VW + +T++G+ V+ G +G E + RG + D
Sbjct: 148 GKEVWHQNTFEGQKGSLTITGAPRVFKGKVIIGNGGAEYGV--------RGYITAYDAET 199
Query: 162 GRIIWQTYMLP--------DNGGKRGGYS------------GAAVWGSSPAIDVIRRQKQ 201
G W+ + +P D KR + G +W S +
Sbjct: 200 GERKWRWFSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELNTMYV 259
Query: 202 NNQTTKP-THPDQCIS--SDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDC 258
P +H + ++Y SIVALD D+G+ W +
Sbjct: 260 GTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKW------------------HYQE 301
Query: 259 PPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
PG N D + +L I G+ R V++ K+GF + DR +G I
Sbjct: 302 TPGDNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFI 350
>gi|86749475|ref|YP_485971.1| Pyrrolo-quinoline quinone [Rhodopseudomonas palustris HaA2]
gi|86572503|gb|ABD07060.1| Pyrrolo-quinoline quinone [Rhodopseudomonas palustris HaA2]
Length = 730
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 85/351 (24%), Positives = 138/351 (39%), Gaps = 73/351 (20%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAGKD--ISATPAVANGVVYFPSWNG 58
W ++G D R++ + IN V+ L L+WS+ G D + ATP V +G++Y +
Sbjct: 82 WPSYGLDYAETRFSKLD-RINVDNVKQLGLQWSYSLGSDRGVEATPVVVDGIMYVTASWS 140
Query: 59 YLYAVNAFNGALIW--EQNLSKLTGLSGTGIVVNVTVAV-------------VVAVSRSN 103
++AV+ G +W + + + G G VVN VA+ +VA+ +
Sbjct: 141 VVHAVDTRTGKKLWTYDPGVDRSKGYRGCCDVVNRGVALYKGKVFVGAYDGRLVALDAAT 200
Query: 104 GELVWS--TQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRN 161
G++VW T ID IT + V+ G +G E RG + D
Sbjct: 201 GKVVWEKDTVIDHGYSYTITGAPRVFNGKVVIGNGGAEYGA--------RGYVTAYDAET 252
Query: 162 GRIIWQTYMLP-------------------DNGGK---RGGYSGAAVWGS---SPAIDVI 196
G W+ + +P D GK GG G W S P ++++
Sbjct: 253 GNQAWRWFTVPGDPSKPFEDASMEAAAKTWDPAGKWWVNGG--GGTAWDSITFDPDLNMV 310
Query: 197 RRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNP 256
N ++Y SIVAL+ D+G+ W +
Sbjct: 311 YIGTGNGSPWARHLRSPAGGDNLYLGSIVALNADTGKYVW------------------HY 352
Query: 257 DCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
PG N D + +L ++ +G+ R VV+ K+GF + DR +G I
Sbjct: 353 QETPGDNWDYTSTQPMILADLTIDGQPRKVVLHAPKNGFFFVIDRTNGKFI 403
>gi|316933585|ref|YP_004108567.1| PQQ-dependent dehydrogenase [Rhodopseudomonas palustris DX-1]
gi|315601299|gb|ADU43834.1| PQQ-dependent dehydrogenase, methanol/ethanol family
[Rhodopseudomonas palustris DX-1]
Length = 724
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 81/351 (23%), Positives = 136/351 (38%), Gaps = 73/351 (20%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAGKD--ISATPAVANGVVYFPSWNG 58
W ++G D R++ + IN V+ L L+WS+ G + + ATP V +G++Y +
Sbjct: 76 WPSYGLDYAETRFSKLD-QINTDNVKQLGLQWSYSLGSERGVEATPVVVDGIMYVTASWS 134
Query: 59 YLYAVNAFNGALIW--EQNLSKLTGLSGTGIVVNVTVAV-------------VVAVSRSN 103
++A++ G +W + + + G G VVN VA+ ++A+ +
Sbjct: 135 VVHAIDTRTGKRLWTFDPKVDRAKGYRGCCDVVNRGVALYKGKVFVGAYDGRLIALDAAT 194
Query: 104 GELVWS--TQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRN 161
G W T ID IT + V+ G +G E RG + D
Sbjct: 195 GSKAWEIDTLIDHEHSYTITGAPRVFNGKVVIGNGGAEYGA--------RGYVTAYDAET 246
Query: 162 GRIIWQTYMLP-------------------DNGGK---RGGYSGAAVWGS---SPAIDVI 196
G+ +W+ + +P D GK GG G W + P +++I
Sbjct: 247 GKQVWRWFTVPGDPSKPFEDESMEKAAKTWDPAGKWWVNGG--GGTAWDTITFDPDLNLI 304
Query: 197 RRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNP 256
N ++Y SIVAL+ D+G+ W +
Sbjct: 305 YVGTGNGSPWARHLRSPSGGDNLYLASIVALNADTGKYVW------------------HY 346
Query: 257 DCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
PG N D + +L I+ +G+ R V++ K+GF + DR G I
Sbjct: 347 QETPGDNWDYTSTQPMILADIAIDGKPRKVILHAPKNGFFFVIDRTDGKFI 397
>gi|297172885|gb|ADI23847.1| glucose dehydrogenase [uncultured gamma proteobacterium
HF4000_48E10]
Length = 545
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 83/335 (24%), Positives = 141/335 (42%), Gaps = 58/335 (17%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAGK--DISATPAVANGVVYFPSWNG 58
WL + G L+++R++ G I+ V L L+WS + TP V +GV++
Sbjct: 51 WLMYSGTLDSKRFS-GLDQIHNRNVGELELKWSHQIRQLDRAETTPLVVDGVMFITESPS 109
Query: 59 YLYAVNAFNGALIWE------QNLSKLTGLSGTGIVV-------NVTVAVVVAVSRSNGE 105
+ AV+A G W +L G + G+ + + A +VA+ +G
Sbjct: 110 NVVAVDAATGRPFWRYDHPLPDDLRVCCGRNNRGVAILGETLYMSTLDAHLVAIDGRSGN 169
Query: 106 LVWSTQI-DPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRI 164
L+WS ++ D R T + + G++ E + RG L D GR
Sbjct: 170 LLWSAEVADYRGGYSKTAAPLIVKDKVVTGIAGGEFGI--------RGFLDAYDADTGRR 221
Query: 165 IWQTYMLP-----DN---GGKRGGYSGAAVW--GS-SPAIDVIRRQKQNNQTTKPTHPDQ 213
W+TY +P DN G G+ W GS P ++++ N P + +
Sbjct: 222 EWRTYTIPGPDHPDNRTWAGDSWRTGGSPTWITGSYDPELNLVYWGTGN---PGPDYNGE 278
Query: 214 CISSD-IYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAP 272
D +YA+S++ALD D+G ++W F FT P D D + P
Sbjct: 279 IRGGDNLYADSVLALDGDTGEMSW--------YFQFT----------PHDVHDWDAIQIP 320
Query: 273 MLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
+L I +G R ++ ++GF + DR++G+ +
Sbjct: 321 VLADIDLDGVQRKAMLWANRNGFYYTLDRETGEFL 355
>gi|254517260|ref|ZP_05129317.1| alcohol dehydrogenase (acceptor) [gamma proteobacterium NOR5-3]
gi|219674098|gb|EED30467.1| alcohol dehydrogenase (acceptor) [gamma proteobacterium NOR5-3]
Length = 710
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 85/350 (24%), Positives = 140/350 (40%), Gaps = 72/350 (20%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRW--SFYAGKDISATPAVANGVVYFPSWNG 58
WL HG +R++ + IN V+ L L W + I TP +A+G ++ + G
Sbjct: 45 WLTHGRTYGEQRFSPLD-QINADNVQELGLAWYAELPTDRGIETTPLMADGKLFATASWG 103
Query: 59 YLYAVNAFNGALIW--EQNLSKLTGLSGTGIVVNVTVAV-------------VVAVSRSN 103
++ A +A G +W + + K G+ VVN A+ + A++R
Sbjct: 104 HVLAYDAKTGEELWHFDPKVPKDYGVHACCDVVNRGAALWGNNVYAASIDGRLHALNRDT 163
Query: 104 GELVWS--TQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRN 161
GE+VWS T+I+ +T + + G +G E + RG + D
Sbjct: 164 GEVVWSVDTRINTTDSYTVTGAPRIVNGKVVIGNGGAE--------MSVRGYVTAYDAVT 215
Query: 162 GRIIWQTYMLPDN-----------------GGK--RGGYSGAAVWGS---SPAIDVIRRQ 199
G W+ Y +P N GK G G W S P ++++
Sbjct: 216 GEQAWRFYTVPGNPADGFEDETQERIADTWTGKWWENGKGGGTAWDSFAFDPELNLLYIG 275
Query: 200 KQNNQT--TKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPD 257
N + K PD +++ +SIVA+D D+G AW Y T
Sbjct: 276 VGNGASWNQKIRSPDG--GDNLFISSIVAVDADTGDYAW---------HYQTT------- 317
Query: 258 CPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
PG N D + +L I +G R V++ K+GF + DR +G+++
Sbjct: 318 --PGDNWDYTATQHMILAEIPIDGEERKVLMQAPKNGFFYVIDRATGELL 365
>gi|320105468|ref|YP_004181058.1| PQQ-dependent enzyme-like protein [Terriglobus saanensis SP1PR4]
gi|319923989|gb|ADV81064.1| PQQ-dependent enzyme-like protein [Terriglobus saanensis SP1PR4]
Length = 511
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 82/334 (24%), Positives = 139/334 (41%), Gaps = 56/334 (16%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAGK--DISATPAVANGVVYFPSWNG 58
W + GD RR++ + V+NL L W+F + I A+P + +G++YF +
Sbjct: 38 WPTYHGDYTARRHS-PLTQVTKDNVKNLGLAWAFQTNQAAGIKASPILVDGILYFTVPDN 96
Query: 59 YLYAVNAFNGALIWE----QNLSKLTGLSGTG-----IVVNVTVAVVVAVSRSNGELVWS 109
+YAV+A +G L+W N + G G I A +V+++ +G + W
Sbjct: 97 -VYAVDARSGHLVWHYTYPPNKGQHIGQRGVAMYKGYIFTTTPDAHLVSLNAKDGTVRWD 155
Query: 110 TQIDPRPRSQ-ITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQT 168
+ + TMS V VG+ + + G + +D G+ WQ
Sbjct: 156 VVVGDMTKGYWTTMSPLVIRDHVLVGMGGDSDNI--------TGYIRSIDPETGKTQWQW 207
Query: 169 YMLPDNGGKRGGYSGAAVW--GS-SPAIDVIRRQKQN-----NQTTKPTHPDQCISSDIY 220
P G G +G W GS P +++ N N T +P ++Y
Sbjct: 208 DATPP-AGTPGAPTGGMAWLTGSYDPDLNLTYWGTGNPTPVLNGTVRP-------GDNLY 259
Query: 221 ANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTISTN 280
SI+AL+ D+G++AWA F T P D D EA +L+ +
Sbjct: 260 TCSIIALNPDTGKMAWA--------FQAT----------PHDTHDWDATEATVLVDGDFH 301
Query: 281 GRFRDVVVAVQKSGFAWAFDRDSGDIIWFKLAGP 314
G+ R +++ ++GF + DR +G+ + GP
Sbjct: 302 GKPRKMLMQASRNGFFFVLDRKTGENLLTTPFGP 335
>gi|194289682|ref|YP_002005589.1| quinohaemoprotein ethanol dehydrogenase [Cupriavidus taiwanensis
LMG 19424]
gi|193223517|emb|CAQ69522.1| Quinohaemoprotein ethanol dehydrogenase [Cupriavidus taiwanensis
LMG 19424]
Length = 722
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 81/349 (23%), Positives = 138/349 (39%), Gaps = 69/349 (19%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSF--YAGKDISATPAVANGVVYFPSWNG 58
W +HG D R++ I+ VR+L L WS+ + + + ATP V +GV+Y +
Sbjct: 74 WPSHGLDYAETRFSRLR-QIDTANVRDLGLVWSYNLESTRGVEATPLVVDGVMYVTASWS 132
Query: 59 YLYAVNAFNGALIW--EQNLSKLTGLSGTGIVVNVTVAV-------------VVAVSRSN 103
++AV+A G +W + + + G G VVN VA+ ++A+ ++
Sbjct: 133 VVHAVDARTGKRLWSFDPKVDRALGYRGCCDVVNRGVALYQGKVFVAAYDGRLIALDAAS 192
Query: 104 GELVWS--TQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRN 161
G +W T ID R IT + V+ G +G E + RG + D
Sbjct: 193 GRKLWEQDTIIDRRYSYTITGAPRVFKGKVIIGNGGAEFGV--------RGYITAYDAAT 244
Query: 162 GRIIWQTYMLPDNGGK----------------RGGY----SGAAVWGS---SPAIDVIRR 198
G W+ + +P + K G Y G W + P ++++
Sbjct: 245 GAQQWRWFTVPGDPSKPFEDESMAAAAKTWDPSGKYWEAGGGGTAWDTLAFDPELNLMYV 304
Query: 199 QKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDC 258
N + ++Y SIVAL+ D+G+ W +
Sbjct: 305 GTGNGAPWSRSKRSPAGGDNLYLASIVALNPDTGKYVW------------------HYQE 346
Query: 259 PPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
PG N D + +L + +G+ R V++ K+GF + DR +G I
Sbjct: 347 TPGDNWDYTSTQPMVLADLKLDGQPRKVILHAPKNGFFFVIDRTNGKFI 395
>gi|385206052|ref|ZP_10032922.1| PQQ-dependent dehydrogenase, methanol/ethanol family [Burkholderia
sp. Ch1-1]
gi|385185943|gb|EIF35217.1| PQQ-dependent dehydrogenase, methanol/ethanol family [Burkholderia
sp. Ch1-1]
Length = 575
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 70/319 (21%), Positives = 124/319 (38%), Gaps = 54/319 (16%)
Query: 20 INPVTVRNLRLRWSFYAGKDI----SATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQN 75
I+ V+NL+ WS+ D+ ATP V ++ + +YA +A G +W+
Sbjct: 70 IDTANVKNLKQVWSYKFPADLQQGFEATPIVNGRYLFVTTPKDNVYAFDASTGKQLWKFE 129
Query: 76 ---------------LSKLTGLSGTGIVVNVTVAVVVAVSRSNGELVWSTQI-DPRPRSQ 119
+++ L G + V + VVA+ G L W Q+ +P
Sbjct: 130 PKLGAESFKTACCDVINRGVALYGKNVYVAMLSGDVVALDAQTGALAWRKQMFEPGVGYA 189
Query: 120 ITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNGGKRG 179
+++ GA VG + E RG +A L+ +G ++W+ + +P G K G
Sbjct: 190 FSLAPLALDGALVVGSAGGEYGA--------RGFIAALNPDDGNVLWKRFTVPAAGEKGG 241
Query: 180 G--------YSGAAVWGSSPAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDS 231
+ GA W + + P D ++Y++S++ALD +
Sbjct: 242 DTWPNGMQEHGGAPAWLTGTYDAASKTLYWGVGNPGPWLADLRPGDNLYSDSLLALDPKT 301
Query: 232 GRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQ 291
G + W +D + D D P+L TI + D ++
Sbjct: 302 GDLKWHYQYTKHDTW------------------DYDGVNTPVLATIKYEDKEYDAIIHAD 343
Query: 292 KSGFAWAFDRDSGDIIWFK 310
++GF A DR +G +I+ K
Sbjct: 344 RNGFFHAIDRGTGKLIYAK 362
>gi|384217177|ref|YP_005608343.1| alcohol dehydrogenase precursor [Bradyrhizobium japonicum USDA 6]
gi|354956076|dbj|BAL08755.1| alcohol dehydrogenase precursor [Bradyrhizobium japonicum USDA 6]
Length = 575
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 73/305 (23%), Positives = 120/305 (39%), Gaps = 49/305 (16%)
Query: 20 INPVTVRNLRLRWSFYAG--KDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWE---- 73
IN V+NL W+F G + A P V NGV++ + G + A+NA G W
Sbjct: 64 INTSNVKNLTPVWTFATGVVEGHEAPPIVNNGVMFVATPMGQVIALNAKTGDEYWRYKRQ 123
Query: 74 --------QNLSKLTGLSGTGIVVNVTVAVVVAVSRSNGELVWSTQIDPRPRSQ-ITMSG 124
S+ GL + + T VVA+ G++VW T++ + Q +T+
Sbjct: 124 LPDDLFQLHPTSRGVGLWEDKLYLATTDDHVVALDAKTGKVVWDTKVQDYKKGQYMTLMP 183
Query: 125 SVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNG--------G 176
+ G VG S E + RG +A D ++G+ +W+TY +P G G
Sbjct: 184 LIIDGKVIVGGSGGEFGV--------RGYVAAYDAKDGKELWRTYTIPGEGEPGHDTWQG 235
Query: 177 KRGGYSGAAVWGSSPAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAW 236
G + W + + P + ++Y +S++ALD +G+I
Sbjct: 236 DDWKNGGGSAWMTGNYDKETKTIYWGVGNAAPWPGEMHPGDNLYTSSVLALDPSNGKIK- 294
Query: 237 AKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFA 296
Y ++ + D D EAPML+ + NGR +V +
Sbjct: 295 -----TYHQYH------------QNDSWDWDEVEAPMLIDLQRNGRNIKSLVHPGRDAIF 337
Query: 297 WAFDR 301
W +R
Sbjct: 338 WVLER 342
>gi|347528477|ref|YP_004835224.1| alcohol dehydrogenase [Sphingobium sp. SYK-6]
gi|345137158|dbj|BAK66767.1| alcohol dehydrogenase (acceptor) [Sphingobium sp. SYK-6]
Length = 707
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 86/359 (23%), Positives = 142/359 (39%), Gaps = 72/359 (20%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRW--SFYAGKDISATPAVANGVVYFPSWNG 58
W++HG + +RY+ IN TV L L W + + ATP V +G++Y S
Sbjct: 46 WMSHGRSYDEQRYS-PLTQINDRTVGRLGLAWYDDLATYRGVQATPLVIDGIIYNASAFN 104
Query: 59 YLYAVNAFNGALIW------EQNLSKLT--GLSGTGIVV---NVTVAVV----VAVSRSN 103
+ A + G +W E+ ++L G S GI + +A + +A+
Sbjct: 105 IVTAYDGRTGRKLWTHDPQVERQWARLACCGPSTRGIAAWNGRIYIAALDGRLIALDAKT 164
Query: 104 GELVWSTQIDPR--PRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRN 161
G+ VW+ Q R P S IT + V+ G +G + + RG ++ D
Sbjct: 165 GKPVWTVQTFDRAYPYS-ITGAPRVFDGKVVIGHGGADYGV--------RGFVSAFDAET 215
Query: 162 GRIIWQTYMLPDN--GGKRGGYSGAAV--------------------WGS---SPAIDVI 196
GR +W+ Y +P N G G S +A+ W S P ++++
Sbjct: 216 GRRLWKFYTVPGNPANGPDGEASDSAMKIALPTWHGQWWKYGGGGTAWDSFAYDPRLNLV 275
Query: 197 RRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNP 256
N + +++ SIVA+D DSG W + + + FTC P
Sbjct: 276 YIGTGNGSPLSWHFRSEGKGDNLFLCSIVAVDADSGAYKWHYQMVPEEDWDFTCTQPM-- 333
Query: 257 DCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDIIWFKLAGPG 315
ML + G+ R V++ K+GF + DR +G +I + PG
Sbjct: 334 ----------------MLADLRIGGKSRQVIMQAPKNGFFYVLDRRTGALISAEKFVPG 376
>gi|372270608|ref|ZP_09506656.1| alcohol dehydrogenase [Marinobacterium stanieri S30]
Length = 703
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 82/348 (23%), Positives = 135/348 (38%), Gaps = 71/348 (20%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRW--SFYAGKDISATPAVANGVVYFP-SWN 57
W++HG D + +R++ + IN L L W F + + + ATP V +GV+Y +WN
Sbjct: 45 WMSHGRDYSEQRFSPLD-QINSENAYRLGLDWYHEFDSKRGLEATPLVIDGVLYTTGTWN 103
Query: 58 GYLYAVNAFNGALIW--EQNLSKLTGLSGTGIVVNVTVAV-------------VVAVSRS 102
+YA +A G +W + +++ G+ VN +A ++A+
Sbjct: 104 -RVYAFDAETGKELWSFDPQVNREIGIKLCCDAVNRGLAAWGDKLYMGTLDGRLIAIDSK 162
Query: 103 NGELVWSTQI-DPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRN 161
GE VW+ Q DP IT + V G +G E + RG + D
Sbjct: 163 TGEDVWTVQTTDPDKAYSITGAPRVIKGKVMIGNGGAEFGV--------RGYFSAYDAET 214
Query: 162 GRIIWQTYMLPDNGG-------------------KRGGYSGAAVWGS---SPAIDVIRRQ 199
G +W+ Y +P N K GG G W S P +D++
Sbjct: 215 GDQLWRFYTVPGNPAEETDPLMKEISSTWSGEWWKLGG--GGTAWDSMAYDPELDLLYVG 272
Query: 200 KQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCP 259
N +++ +SIVA+ D+G W Y T
Sbjct: 273 VGNGSPWNREIRSNGEGDNLFLSSIVAVRPDTGEYVW---------HYQTT--------- 314
Query: 260 PGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
PG D + +L + +G R V++ K+G + DR++G+ I
Sbjct: 315 PGEEWDYTATQHMILADLELDGEARKVIMQAPKNGNFYVLDRETGEFI 362
>gi|73539241|ref|YP_299608.1| Pyrrolo-quinoline quinone [Ralstonia eutropha JMP134]
gi|72122578|gb|AAZ64764.1| Pyrrolo-quinoline quinone [Ralstonia eutropha JMP134]
Length = 576
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 82/363 (22%), Positives = 137/363 (37%), Gaps = 81/363 (22%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAG--KDISATPAVANGVVYFPSWNG 58
WL+ G RY Y IN V LR + F + + P V NGV++ +
Sbjct: 63 WLHSNGSYGQTRY-YAGTQINTKNVAKLRPAFVFQTAVMESMETAPIVVNGVMFLTTSYN 121
Query: 59 YLYAVNAFNGALIW--EQNLSKLT-----------GLSGTGIVVNVTVAVVVAVSRSNGE 105
++YAV+A G W + + +T +SG + + A +V++ G+
Sbjct: 122 HVYAVDAVTGKEFWHYKHKMGPVTTFCCGPNNRGVAISGDRLYMGTLDAKLVSLDAKTGK 181
Query: 106 LVWSTQI-DPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRI 164
L+W TQI DP TM+ V +G + E + RG + +G++
Sbjct: 182 LLWETQIADPELGYSETMAPVVVDDKILIGTNGGEYGI--------RGFVKAFSANDGKL 233
Query: 165 IWQTYMLPDNGGK--------------------------RGG----YSGAAVWGSSPAID 194
+W Y +PD G + +GG G VW +PA+D
Sbjct: 234 LWTFYTIPDKGHEGVWATKDATGRDMKRNIAAEKKMLSDKGGDFYKTLGGGVW-MAPAVD 292
Query: 195 VIRRQKQNNQTTKPTHPDQCIS----SDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTC 250
R K PD + ++Y +S+VA+D+++G W +D++
Sbjct: 293 --RANKLVIFVVGNPSPDLYGAIRPGDNLYTDSMVAVDLNTGAYKWHSQYIAHDVWDLDA 350
Query: 251 LVPNNPDCPPGPNLDADFGEAPMLLTI-STNGRFRDVVVAVQKSGFAWAFDRDSGDIIWF 309
+ P P+L+ + G V+ K+G + DR G +I F
Sbjct: 351 VSP------------------PILVDVRDEKGNMIPGVIHGGKTGHVYVHDRRDGRLIRF 392
Query: 310 KLA 312
A
Sbjct: 393 SDA 395
>gi|350627704|gb|AEQ33646.1| DppA [Pseudomonas putida]
Length = 698
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 83/353 (23%), Positives = 140/353 (39%), Gaps = 79/353 (22%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRN---LRLRWSFYAG--KDISATPAVANGVVYFP- 54
WL+HG + +R++ ++ +T +N L L WS + + ATP A+GV+Y
Sbjct: 42 WLSHGRTYDEQRFS----PLDQITAKNADKLGLAWSLDLDNHRGLEATPLFADGVLYTSL 97
Query: 55 SWNGYLYAVNAFNGALIW--EQNLSKLTGLSGTGIVVNVTVAV-------------VVAV 99
SW+ + AV+A G +W + +++ VN VA+ ++A+
Sbjct: 98 SWSRAM-AVDARTGKTLWTFDPQIAREKARDACCDAVNRGVALWNGKVFIGTLDGRLIAL 156
Query: 100 SRSNGELVWSTQI-DPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLD 158
G+ VWS Q D IT + V G +G E + RG + D
Sbjct: 157 DAKTGKEVWSQQTTDNSKPYTITGAPRVVKGKVIIGNGGAEYGV--------RGYFSAYD 208
Query: 159 VRNGRIIWQTYMLP---------------------DNGGKRGGYSGAAVW---GSSPAID 194
G++ W+ Y +P D K GG G VW P +D
Sbjct: 209 AETGKMAWRFYTVPGDPNQPYEHPELAEAAKTWKGDEYWKLGG--GGTVWDGMAYDPELD 266
Query: 195 VIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPN 254
++ N ++Y +SI+AL+ D+GR+AW
Sbjct: 267 LLYVGTGNGSPWNRELRSPGGGDNLYLSSILALNPDTGRLAW------------------ 308
Query: 255 NPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
+ PG + D + L T+ G+ R V++ K+GF + DR +G+++
Sbjct: 309 HYQVTPGDSWDFTATQQITLATLEIGGKPRKVLMQAPKNGFFYVIDRQTGELL 361
>gi|239817976|ref|YP_002946886.1| PQQ-dependent dehydrogenase [Variovorax paradoxus S110]
gi|239804553|gb|ACS21620.1| PQQ-dependent dehydrogenase, methanol/ethanol family [Variovorax
paradoxus S110]
Length = 697
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 75/349 (21%), Positives = 138/349 (39%), Gaps = 69/349 (19%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSF--YAGKDISATPAVANGVVYFPSWNG 58
W ++G D R++ + +N V+ L L WS+ + + + ATP V +GV+Y +
Sbjct: 50 WPSYGLDYAESRFSKLD-QVNAGNVKQLGLAWSYNLESTRGVEATPLVVDGVMYVTASWS 108
Query: 59 YLYAVNAFNGALIW--EQNLSKLTGLSGTGIVVNVTVAV-------------VVAVSRSN 103
++A++ G +W + + K G G VVN VA+ ++A+ +
Sbjct: 109 VVHAIDTRTGQKLWSFDPQVDKSKGFRGCCDVVNRGVALHEGKVYVGAFDGRLIALDAAT 168
Query: 104 GELVWSTQIDPRPRSQITMSGS--VYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRN 161
G+ VW + T++G+ V+ G +G E + RG + D +
Sbjct: 169 GQKVWEKNTIEGQKGSYTITGAPRVFKGKVIIGNGGAEYGV--------RGYVTAYDAKT 220
Query: 162 GRIIWQTYMLPDNGGK----------------RGGY----SGAAVWGS---SPAIDVIRR 198
G W+ +++P + K G Y G W S P ++++
Sbjct: 221 GEQKWRWFVVPGDPAKPFEDESMARAAKTWDPSGKYWEAGGGGTAWDSFAFDPELNLMYV 280
Query: 199 QKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDC 258
N ++Y S+VAL+ D+G+ W +
Sbjct: 281 GTGNGSPWAHKKRSPKGGDNLYLGSVVALNPDTGKYVW------------------HYQE 322
Query: 259 PPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
PG N D ++ +L ++ G+ R V++ K+GF + DR +G I
Sbjct: 323 TPGDNWDYTSTQSMILANVTLGGKARKVLLHAPKNGFFFVIDRTNGKFI 371
>gi|254255222|ref|ZP_04948538.1| Glucose dehydrogenase [Burkholderia dolosa AUO158]
gi|124900959|gb|EAY71709.1| Glucose dehydrogenase [Burkholderia dolosa AUO158]
Length = 416
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 89/222 (40%), Gaps = 35/222 (15%)
Query: 96 VVAVSRSNGELVWS-TQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSL 154
V A+ G LVW + +P +++ GA VG S E RG +
Sbjct: 6 VAALDAKTGALVWKKSMFEPGLGYAFSLAPLAIDGAIVVGSSGGEYGA--------RGFI 57
Query: 155 AKLDVRNGRIIWQTYMLPDNGGKRG--------GYSGAAVWGSSPAIDVIRRQKQNNQTT 206
A LD +G ++W+ Y +P G K G + GA W + R
Sbjct: 58 AALDPNDGALLWKRYTIPGQGEKHGDTWPDGMQSHGGAPAWLTGTYDAATRTLYWGVGNP 117
Query: 207 KPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDA 266
P D ++Y++S++ALD +G + W +D + D
Sbjct: 118 GPWLADLRPGDNLYSDSLLALDPKNGELKWHYQYTKHDTW------------------DY 159
Query: 267 DFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDIIW 308
D P+L TI G+ RD ++ ++GF A DRD+G +I+
Sbjct: 160 DGVNTPILATIKYKGKERDAIIHADRNGFFHAIDRDTGKLIY 201
>gi|398867143|ref|ZP_10622611.1| PQQ-dependent dehydrogenase, methanol/ethanol family [Pseudomonas
sp. GM78]
gi|398237892|gb|EJN23633.1| PQQ-dependent dehydrogenase, methanol/ethanol family [Pseudomonas
sp. GM78]
Length = 698
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 83/353 (23%), Positives = 140/353 (39%), Gaps = 79/353 (22%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRN---LRLRWSFYAG--KDISATPAVANGVVYFP- 54
WL+HG + +R++ ++ +T +N L L WS + + ATP A+GV+Y
Sbjct: 42 WLSHGRTYDEQRFS----PLDQITAKNAGKLGLAWSLDLDNHRGLEATPLFADGVLYTSL 97
Query: 55 SWNGYLYAVNAFNGALIW--EQNLSKLTGLSGTGIVVNVTVAV-------------VVAV 99
SW+ + AV+A G +W + +++ VN VA+ ++A+
Sbjct: 98 SWSRAM-AVDARTGKTLWTFDPQIAREKARDACCDAVNRGVALWNGKVFIGTLDGRLIAL 156
Query: 100 SRSNGELVWSTQI-DPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLD 158
G+ VWS Q D IT + V G +G E + RG + D
Sbjct: 157 DAKTGKEVWSQQTTDNSKPYTITGAPRVVKGKVIIGNGGAEYGV--------RGYFSAYD 208
Query: 159 VRNGRIIWQTYMLP---------------------DNGGKRGGYSGAAVW---GSSPAID 194
G++ W+ Y +P D K GG G VW P +D
Sbjct: 209 AETGKMAWRFYTVPGDPNQPYEHPELAEAAKTWKGDEYWKLGG--GGTVWDGMAYDPELD 266
Query: 195 VIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPN 254
++ N ++Y +SI+AL+ D+GR+AW
Sbjct: 267 LLYVGTGNGSPWNRELRSPGGGDNLYLSSILALNPDTGRLAW------------------ 308
Query: 255 NPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
+ PG + D + L T+ G+ R V++ K+GF + DR +G+++
Sbjct: 309 HYQVTPGDSWDFTATQQITLATLEIGGKPRKVLMQAPKNGFFYVIDRQTGELL 361
>gi|22219097|pdb|1KV9|A Chain A, Structure At 1.9 A Resolution Of A Quinohemoprotein
Alcohol Dehydrogenase From Pseudomonas Putida Hk5
Length = 668
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 80/349 (22%), Positives = 139/349 (39%), Gaps = 71/349 (20%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRW--SFYAGKDISATPAVANGVVYFPSWNG 58
WL+HG +R++ + I+ VR+L L W + + ATP +GV+Y
Sbjct: 18 WLSHGRTYAEQRFSPLK-QIDASNVRSLGLAWYMDLDNTRGLEATPLFHDGVIYTSMSWS 76
Query: 59 YLYAVNAFNGALIW--EQNLSKLTGLSGTGIVVNVTVAV-------------VVAVSRSN 103
+ AV+A +G +W + ++K+ + VN VA+ ++A+
Sbjct: 77 RVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVALWGDKVYVGTLDGRLIALDAKT 136
Query: 104 GELVWSTQI-DPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNG 162
G+ +WS Q DP IT + V G +G E + RG ++ D G
Sbjct: 137 GKAIWSQQTTDPAKPYSITGAPRVVKGKVIIGNGGAEYGV--------RGFVSAYDADTG 188
Query: 163 RIIWQTYMLP---------------------DNGGKRGGYSGAAVWGS---SPAIDVIRR 198
++ W+ Y +P D K GG G VW S P +D++
Sbjct: 189 KLAWRFYTVPGDPALPYEHPELREAAKTWQGDQYWKLGG--GGTVWDSMAYDPELDLLYV 246
Query: 199 QKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDC 258
N ++Y +SI+A+ D+G++AW +
Sbjct: 247 GTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAW------------------HYQV 288
Query: 259 PPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
PG + D + L ++ +G+ R V++ K+GF + DR +G +I
Sbjct: 289 TPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLI 337
>gi|284990939|ref|YP_003409493.1| PQQ-dependent dehydrogenase [Geodermatophilus obscurus DSM 43160]
gi|284064184|gb|ADB75122.1| PQQ-dependent dehydrogenase, methanol/ethanol family
[Geodermatophilus obscurus DSM 43160]
Length = 576
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 76/345 (22%), Positives = 140/345 (40%), Gaps = 72/345 (20%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSF-------YAGKDISA---TPAVANGV 50
WL + G + +RY+ + IN V L W F +AG+ A +P + GV
Sbjct: 53 WLTYYGAYDGQRYSPLD-QINRENVVRLTPAWVFSFSPHGLHAGQSTYAFETSPIIVEGV 111
Query: 51 VYFPSWNGYLYAVNAFNGALIWEQ-------------NLSKLTGLSGTGIVVNVTVAVVV 97
+Y W+G+++A++A G L+W+ N+++ ++ + V A V+
Sbjct: 112 MYVSGWDGWVWALDAKTGQLLWQYKHAIPFDVSLCCGNVNRGVAVAKGKVFVCTLNAHVL 171
Query: 98 AVSRSNGELVWS-TQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAK 156
A+ + GE +W T D R +T++ V VG S E + RG L
Sbjct: 172 ALDAATGECIWDVTSGDVRAGESLTVAPLVVKDRVVVGSSGGEFGV--------RGHLDA 223
Query: 157 LDVRNGRIIWQTYMLPDNG----------GKRGGYSGAAVWGS---SPAIDVIRRQKQNN 203
D+ G +W+ Y +P G G+ G W + P +++ N
Sbjct: 224 YDMETGERMWRCYTIPKPGEPGSETWPQDGEAWARGGGNCWVTGTFDPETNLLYWGTGN- 282
Query: 204 QTTKPTHPDQCISSD-IYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGP 262
P + D +Y +S++A+D D+G I W +D++ + +N +C
Sbjct: 283 --PAPDFDGEVRPGDNLYTDSVIAVDADTGEIRWHYQCTPHDLWDYD----SNMEC---- 332
Query: 263 NLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
+ +G R ++ K+G+ + DR +G+ +
Sbjct: 333 ------------ILFEEDG--RKLLAHFDKNGYCFVLDRTTGERV 363
>gi|423095904|ref|ZP_17083700.1| quinohemoprotein alcohol dehydrogenase A [Pseudomonas fluorescens
Q2-87]
gi|397887797|gb|EJL04280.1| quinohemoprotein alcohol dehydrogenase A [Pseudomonas fluorescens
Q2-87]
Length = 726
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 82/350 (23%), Positives = 139/350 (39%), Gaps = 72/350 (20%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAGKD--ISATPAVANGVVYFPSWNG 58
W++ G + +RY+ + I+ V L L WS+ D + ATP V +GV+Y
Sbjct: 61 WMSTGRTYDEQRYSPLK-QISDQNVGQLGLAWSYKLDLDRGVEATPIVVDGVMYTTGPFS 119
Query: 59 YLYAVNAFNGALIWEQNLSKLTGLSGTGI--VVNVTVAV-------------VVAVSRSN 103
+YA++A +G LIW+ + +G VN VAV + A+
Sbjct: 120 VVYALDARDGKLIWKYDPKSDRNRAGEACCDAVNRGVAVWKGKVYVGVLDGRLEAIDAKT 179
Query: 104 GELVWS--TQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRN 161
G+ WS T+ D + IT + V G +G E + RG + D
Sbjct: 180 GQRAWSVDTRADHKRSYTITGAPRVVNGKVVIGNGGAEFGV--------RGYVTAYDAET 231
Query: 162 GRIIWQTYMLPDNGG---------------------KRGGYSGAAVWGS---SPAIDVIR 197
G+ W+ Y +P + ++GG G W S P ++++
Sbjct: 232 GKQAWRFYTVPGDPKLPPEDKAMAIAAKTWHGEAFVEQGG--GGTAWDSFAFDPDLNLLY 289
Query: 198 RQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPD 257
N P Q +++ +SIVA++ D+G AW Y T
Sbjct: 290 IGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYAW---------HYQTT------- 333
Query: 258 CPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
PG D + +L + +G+ R V++ K+GF + DR +G+++
Sbjct: 334 --PGDAWDYTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGELL 381
>gi|75397879|sp|Q8GR64.1|QHED_PSEPU RecName: Full=Quinohemoprotein alcohol dehydrogenase ADH IIB;
Short=ADH IIB; AltName: Full=Alcohol dehydrogenase
(azurin); Flags: Precursor
gi|22779361|dbj|BAC15559.1| quinohemoprotein alcohol dehydrogenase ADH IIB [Pseudomonas putida]
Length = 690
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 80/349 (22%), Positives = 139/349 (39%), Gaps = 71/349 (20%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRW--SFYAGKDISATPAVANGVVYFPSWNG 58
WL+HG +R++ + I+ VR+L L W + + ATP +GV+Y
Sbjct: 40 WLSHGRTYAEQRFSPLK-QIDASNVRSLGLAWYMDLDNTRGLEATPLFHDGVIYTSMSWS 98
Query: 59 YLYAVNAFNGALIW--EQNLSKLTGLSGTGIVVNVTVAV-------------VVAVSRSN 103
+ AV+A +G +W + ++K+ + VN VA+ ++A+
Sbjct: 99 RVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVALWGDKVYVGTLDGRLIALDAKT 158
Query: 104 GELVWSTQI-DPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNG 162
G+ +WS Q DP IT + V G +G E + RG ++ D G
Sbjct: 159 GKAIWSQQTTDPAKPYSITGAPRVVKGKVIIGNGGAEYGV--------RGFVSAYDADTG 210
Query: 163 RIIWQTYMLP---------------------DNGGKRGGYSGAAVWGS---SPAIDVIRR 198
++ W+ Y +P D K GG G VW S P +D++
Sbjct: 211 KLAWRFYTVPGDPALPYEHPELREAAKTWQGDQYWKLGG--GGTVWDSMAYDPELDLLYV 268
Query: 199 QKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDC 258
N ++Y +SI+A+ D+G++AW +
Sbjct: 269 GTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAW------------------HYQV 310
Query: 259 PPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
PG + D + L ++ +G+ R V++ K+GF + DR +G +I
Sbjct: 311 TPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLI 359
>gi|390956011|ref|YP_006419768.1| glucose dehydrogenase [Terriglobus roseus DSM 18391]
gi|390410929|gb|AFL86433.1| glucose dehydrogenase [Terriglobus roseus DSM 18391]
Length = 541
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 78/338 (23%), Positives = 134/338 (39%), Gaps = 70/338 (20%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSF-YAGKDISATPAVANGVVYFPSWNGY 59
W + GD + RR++ IN V+NL L W+F G + TP V +GV+Y S +
Sbjct: 56 WTTYNGDTSGRRFS-SLAQINSTNVKNLALAWAFPTRGLAVKGTPLVVDGVMYLTSPD-K 113
Query: 60 LYAVNAFNGALIWEQNL-SKLTGLSGTGIV-------VNVTVAVVVAVSRSNGELVWSTQ 111
+A++A G +W N S ++ G+ + A ++ + G+ VW
Sbjct: 114 AWAIDAGTGVQLWAWNRPSDGNHIANRGVAYLNGKVYLGTPDAHLICLDAKTGKQVWDVV 173
Query: 112 I-DPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYM 170
I D + ++ V VG S + +P LA D G+++W+
Sbjct: 174 IADSKFSYYTAVAPLVVKDKIVVGTSGDQSDIPH--------FLAAFDPETGKVVWRLDT 225
Query: 171 LPDNGGKRGGYSGAAVWGSS-----------------PAIDVIRRQKQNNQTTKPTHP-- 211
+P + G GA W PA++++ N HP
Sbjct: 226 IP-----KAGEPGAETWPDENSRQHGGGPLWVTGTYDPALNLMFWGTGN------PHPVL 274
Query: 212 --DQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFG 269
D +++Y SI+A+D D+G+I W Y+ P D D
Sbjct: 275 AGDVRKGANLYTCSILAIDPDTGKIKW----------YY--------QPSPHDTHDWDAV 316
Query: 270 EAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
E P+L NG+ R ++ ++G+ + DR +G+ +
Sbjct: 317 ETPVLFDGMFNGKPRKLLAHASRNGYFFVLDRATGEHL 354
>gi|386396288|ref|ZP_10081066.1| PQQ-dependent dehydrogenase, methanol/ethanol family
[Bradyrhizobium sp. WSM1253]
gi|385736914|gb|EIG57110.1| PQQ-dependent dehydrogenase, methanol/ethanol family
[Bradyrhizobium sp. WSM1253]
Length = 618
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 84/359 (23%), Positives = 135/359 (37%), Gaps = 82/359 (22%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAGKD--ISATPAVANGVVYF--PSW 56
W D N RY+ + IN L+L W+F G D A P V +G +Y P
Sbjct: 46 WPMAARDYANTRYSELD-QINASNASRLQLAWTFSVGADRGQEAAPLVVDGTMYVVGPYA 104
Query: 57 NGY---LYAVNAFNGALIWEQNLSKLTGLSGTG---------------IVVNVTVAVVVA 98
Y ++A++A G L W +G I +N VA
Sbjct: 105 GPYPNRVFALDATTGELKWSYAPKPEPAAAGVACCDVVNRGLAFDNGKIFLNTLDNHTVA 164
Query: 99 VSRSNGELVWSTQIDPRPRSQ-ITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKL 157
+ +G+ +W T++ + + ITM+ V G VG S E + RG + L
Sbjct: 165 IDAKSGKELWHTKLGEINKGETITMAPVVVRGKILVGNSGGEMGV--------RGWVTAL 216
Query: 158 DVRNGRIIWQTYML-PDNG-------------------------GKRGGYSGAAVWG--- 188
D G I W+ Y PD R G VWG
Sbjct: 217 DETTGAITWRAYSTGPDKDVLIGDDFKPYYDSLKGKDLGVKTWPADRWQIGGGTVWGWIS 276
Query: 189 SSPAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYF 248
P +++I N P + +Q ++++ +I A D D+GR WA + +D+F
Sbjct: 277 YDPELNLIYYGTAN---PSPWNANQRSGDNLWSTTIFARDPDTGRAKWAYQINPHDLF-- 331
Query: 249 TCLVPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
D D +L+ + NG+ R V++ ++G+ + DR +G++I
Sbjct: 332 ----------------DHDEINENVLVDLELNGKPRKVLIHPGRNGYMYVMDRATGEVI 374
>gi|148550575|ref|YP_001260014.1| Pyrrolo-quinoline quinone [Sphingomonas wittichii RW1]
gi|148502994|gb|ABQ71247.1| Pyrrolo-quinoline quinone [Sphingomonas wittichii RW1]
Length = 709
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 80/349 (22%), Positives = 138/349 (39%), Gaps = 69/349 (19%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAG--KDISATPAVANGVVYFPSWNG 58
W ++G D + R++ I+ V L L W++ G + + ATP V +G++Y +
Sbjct: 54 WPSYGLDYSETRFSK-LSQISTDNVARLGLAWTYDLGSTRGVEATPLVVDGIMYVTASWS 112
Query: 59 YLYAVNAFNGALIW--EQNLSKLTGLSGTGIVVNVTVAV-------------VVAVSRSN 103
++A+N G +W + + + G G VVN VAV ++A+ ++
Sbjct: 113 VVHAINVRTGKQLWTFDPQVPRSAGGKGCCDVVNRGVAVYEGKVFVGAFDGRLIALDAAS 172
Query: 104 GELVWSTQIDPRPRSQITMSGS--VYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRN 161
G +W P S T++G+ VY G +G E L RG + D +
Sbjct: 173 GAKLWEEDTRLSPDSPATITGAPRVYKGKVIIGNGGAELGL--------RGYITAYDASS 224
Query: 162 GRIIWQTYMLPDNGGK----------------RGGY----SGAAVWGS---SPAIDVIRR 198
G+ +W+ + +P + K G Y G VW S P ++++
Sbjct: 225 GKKLWRWFTVPGDPSKPFENKAMEAAAKTWDPSGRYWEAGGGGTVWNSMAFDPQLNLMYI 284
Query: 199 QKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDC 258
N ++Y SIVAL+ D+G W +
Sbjct: 285 GVGNGAPWSRNRRSPKGGDNLYLGSIVALNPDTGEYVW------------------HYQE 326
Query: 259 PPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
PG N D + +L ++ +G R V++ K+GF + DR +G I
Sbjct: 327 TPGDNWDYTSTQDMILADMTVDGAPRKVILHAPKNGFFFVIDRTNGKFI 375
>gi|386401138|ref|ZP_10085916.1| PQQ-dependent dehydrogenase, methanol/ethanol family
[Bradyrhizobium sp. WSM1253]
gi|385741764|gb|EIG61960.1| PQQ-dependent dehydrogenase, methanol/ethanol family
[Bradyrhizobium sp. WSM1253]
Length = 579
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 72/305 (23%), Positives = 120/305 (39%), Gaps = 49/305 (16%)
Query: 20 INPVTVRNLRLRWSFYAG--KDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWE---- 73
IN V+NL W+F G + A P V NGV++ + G + A+NA G W
Sbjct: 68 INTSNVKNLTPVWTFATGVVEGHEAPPIVNNGVMFVATPMGQVIALNAKTGDEYWRYKRQ 127
Query: 74 --------QNLSKLTGLSGTGIVVNVTVAVVVAVSRSNGELVWSTQIDPRPRSQ-ITMSG 124
S+ GL + + T VVA+ G++VW T++ + Q +T+
Sbjct: 128 LPDDLFQLHPTSRGVGLWEDKLYLATTDDHVVALDAKTGKVVWDTKVQDYKKGQYMTLMP 187
Query: 125 SVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNG--------G 176
+ G VG S E + RG +A D ++G+ +W+TY +P G G
Sbjct: 188 LIVDGKVIVGGSGGEFGV--------RGYVAAYDAKDGKELWRTYTIPGEGEPGHDTWQG 239
Query: 177 KRGGYSGAAVWGSSPAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAW 236
+ G + W + + P + ++Y +S++ALD ++G+I
Sbjct: 240 EDWKNGGGSAWMTGNYDKDTKTIYWGVGNAAPWPGEMHPGDNLYTSSVLALDPNTGKIKT 299
Query: 237 AKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFA 296
D + D D EAPML+ + +GR +V +
Sbjct: 300 HHQYHQNDSW------------------DWDEVEAPMLIDLQRDGRNIKSLVHPGRDAIF 341
Query: 297 WAFDR 301
W +R
Sbjct: 342 WILER 346
>gi|91779782|ref|YP_554990.1| putative alcohol dehydrogenase [Burkholderia xenovorans LB400]
gi|91692442|gb|ABE35640.1| putative alcohol dehydrogenase [Burkholderia xenovorans LB400]
Length = 575
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 70/319 (21%), Positives = 123/319 (38%), Gaps = 54/319 (16%)
Query: 20 INPVTVRNLRLRWSFYAGKDI----SATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQN 75
I+ V+NL+ WS+ D+ ATP V ++ + +YA +A G +W+
Sbjct: 70 IDTANVKNLKQVWSYKFPADLQQGFEATPIVNGRYLFVTTPKDNVYAFDAATGKQLWKFE 129
Query: 76 ---------------LSKLTGLSGTGIVVNVTVAVVVAVSRSNGELVWSTQI-DPRPRSQ 119
+++ L G + V + VVA+ G L W Q+ +P
Sbjct: 130 PKLGAESFKTACCDVINRGVALYGKNVYVAMLSGDVVALDAQTGALAWRKQMFEPGLGYA 189
Query: 120 ITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNGGKRG 179
+++ GA VG + E RG +A L+ NG ++W+ + +P G K
Sbjct: 190 FSLAPLALDGALVVGSAGGEYGA--------RGFIAALNPDNGNVLWKRFTVPAAGEKGA 241
Query: 180 G--------YSGAAVWGSSPAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDS 231
+ GA W + + P D ++Y++S++ALD +
Sbjct: 242 DTWPNGMQEHGGAPAWLTGTYDAASKTLYWGVGNPGPWLADLRPGDNLYSDSLLALDPKT 301
Query: 232 GRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQ 291
G + W +D + D D P+L TI + D ++
Sbjct: 302 GDLKWHYQYTKHDTW------------------DYDGVNTPVLATIRYQDKEYDAIIHAD 343
Query: 292 KSGFAWAFDRDSGDIIWFK 310
++GF A DR +G +I+ K
Sbjct: 344 RNGFFHAIDRGTGKLIYAK 362
>gi|374576968|ref|ZP_09650064.1| PQQ-dependent dehydrogenase, methanol/ethanol family
[Bradyrhizobium sp. WSM471]
gi|374425289|gb|EHR04822.1| PQQ-dependent dehydrogenase, methanol/ethanol family
[Bradyrhizobium sp. WSM471]
Length = 579
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 72/305 (23%), Positives = 122/305 (40%), Gaps = 49/305 (16%)
Query: 20 INPVTVRNLRLRWSFYAG--KDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWE---- 73
IN V+NL W+F G + A P V NGV++ + G + A+NA G W
Sbjct: 68 INTSNVKNLTPVWTFATGVVEGHEAPPIVNNGVMFVATPMGQVIALNAKTGDEYWRYKRQ 127
Query: 74 --------QNLSKLTGLSGTGIVVNVTVAVVVAVSRSNGELVWSTQIDPRPRSQ-ITMSG 124
S+ GL + + T VVA+ G++VW T++ + Q +T+
Sbjct: 128 LPDDLFQLHPTSRGVGLWEDKLYLATTDDHVVALDAKTGKVVWDTKVQDYKKGQYMTLMP 187
Query: 125 SVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNG--------G 176
+ G VG S E + RG +A D ++G+ +W+TY +P G G
Sbjct: 188 LIVDGKVIVGGSGGEFGV--------RGYVAAYDAKDGKELWRTYTIPGEGEPGHDTWQG 239
Query: 177 KRGGYSGAAVWGSSPAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAW 236
+ G + W + + P + ++Y +S++ALD ++G+I
Sbjct: 240 EDWKNGGGSAWMTGNYDKDTKTIYWGVGNAAPWPGEMHPGDNLYTSSVLALDPNTGKIK- 298
Query: 237 AKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFA 296
Y ++ + D D EAPML+ + +GR +V +
Sbjct: 299 -----TYHQYH------------QNDSWDWDEVEAPMLIDLQRDGRNIKSLVHPGRDAIF 341
Query: 297 WAFDR 301
W +R
Sbjct: 342 WILER 346
>gi|386838522|ref|YP_006243580.1| alcohol dehydrogenase [Streptomyces hygroscopicus subsp.
jinggangensis 5008]
gi|374098823|gb|AEY87707.1| alcohol dehydrogenase [Streptomyces hygroscopicus subsp.
jinggangensis 5008]
gi|451791814|gb|AGF61863.1| alcohol dehydrogenase [Streptomyces hygroscopicus subsp.
jinggangensis TL01]
Length = 569
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/289 (23%), Positives = 116/289 (40%), Gaps = 50/289 (17%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAGK----------DISATPAVANGV 50
WL + G N +RY+ + IN V+ + W F AG A P V +GV
Sbjct: 52 WLTYYGAYNGQRYSPLD-QINTENVKRMVPAWVFQAGTTGLIAGASTYSFEAAPIVVDGV 110
Query: 51 VYFPSWNGYLYAVNAFNGALIWEQ-------------NLSKLTGLSGTGIVVNVTVAVVV 97
++ W+G+++A++A G IW N+++ ++ + A V+
Sbjct: 111 MFLSGWDGWVWALDAKTGVEIWRYKHAVPFDVSLCCGNVNRGVAVAQGKVFFVTANARVL 170
Query: 98 AVSRSNGELVW-STQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAK 156
A+ + G VW T D R T++ V VG S E + RG L
Sbjct: 171 ALDATTGRRVWDKTYGDVRAGESATLAPLVVKNMVIVGSSGGEFGV--------RGHLDA 222
Query: 157 LDVRNGRIIWQTYMLPDNG----------GKRGGYSGAAVWGS---SPAIDVIRRQKQNN 203
D+ G W+ Y +P G G+ GA W + P +++ N
Sbjct: 223 FDLETGEHQWRCYTVPKPGEPGSETWPADGEAWARGGANCWITGTFDPETNLLYVGTGN- 281
Query: 204 QTTKPTHPDQCISSD-IYANSIVALDIDSGRIAWAKPLGGYDIFYFTCL 251
P + D ++ +SI+A+D+DSG+I W +D++ + +
Sbjct: 282 --PAPDFDGEVREGDNLFTDSIIAVDVDSGQIRWHYQCTPHDVWDYDSI 328
>gi|85709523|ref|ZP_01040588.1| Alcohol dehydrogenase large subunit [Erythrobacter sp. NAP1]
gi|85688233|gb|EAQ28237.1| Alcohol dehydrogenase large subunit [Erythrobacter sp. NAP1]
Length = 731
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 88/360 (24%), Positives = 142/360 (39%), Gaps = 85/360 (23%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAGKDIS----ATPAVANGVVYFPSW 56
W++HG + +R++ + +N V L L W YA D + ATP V +G +Y +
Sbjct: 53 WISHGRTYDEQRFSPLD-QVNAENVGELGLAW--YADMDTARGQEATPLVMDGKLYLTTA 109
Query: 57 NGYLYAVNAFNGALIWEQNLSKLTGLSGTGI---VVNVTVAV-------------VVAVS 100
+ A +A G +W+ + ++ G +G + VVN +A +V++
Sbjct: 110 WSKVKAFDAATGKPLWDYD-PEVPGETGVKVCCDVVNRGLAAWGNSLFLGTLDGRLVSLD 168
Query: 101 RSNGELVWST-QIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDV 159
R GE+ W +D IT + V G +G E + RG +A D
Sbjct: 169 RDTGEVQWEVVTVDQSMAYSITGAPRVIDGKVIIGNGGAEFGV--------RGYIAAYDA 220
Query: 160 RNGRIIWQTYMLPDNGGKRGGYS------------------------GAAVWGS---SPA 192
+G +W+ Y +PD G GG S G VW S P
Sbjct: 221 ADGSELWRFYTVPD--GNEGGESPQYLQDAAETWNTEVLRSSDSIGGGGTVWDSMAYDPE 278
Query: 193 IDVIRRQKQN----NQTTKPTHPDQCISSD-IYANSIVALDIDSGRIAWAKPLGGYDIFY 247
+D++ N NQ + D D +Y +SIVA+ D+G W Y
Sbjct: 279 LDLLYFGVGNGSPWNQAYRSPGEDGTGEGDNLYLSSIVAIRPDTGEYVW---------HY 329
Query: 248 FTCLVPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
T PG D + +L + +G R V++ K+GF + DR++G+ I
Sbjct: 330 QTT---------PGETWDYTATQHIILADMEVDGEERKVLMQAPKNGFFYVLDRETGEFI 380
>gi|339325994|ref|YP_004685687.1| quinohemoprotein ethanol dehydrogenase type-1 [Cupriavidus necator
N-1]
gi|338166151|gb|AEI77206.1| quinohemoprotein ethanol dehydrogenase type-1 [Cupriavidus necator
N-1]
Length = 719
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 78/349 (22%), Positives = 137/349 (39%), Gaps = 69/349 (19%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSF--YAGKDISATPAVANGVVYFPSWNG 58
W +HG D R++ I+ VR+L L W++ + + + ATP V +GV+Y +
Sbjct: 71 WPSHGLDYAETRFSRLR-QIDAANVRDLGLVWTYNLESTRGVEATPLVVDGVMYVTASWS 129
Query: 59 YLYAVNAFNGALIW--EQNLSKLTGLSGTGIVVNVTVAV-------------VVAVSRSN 103
++AV+A G +W + + + G G VVN VA+ ++A+ ++
Sbjct: 130 VVHAVDARTGKRLWTFDPKVDRSLGYRGCCDVVNRGVALYQGKVFVAAYDGRLIALDAAS 189
Query: 104 GELVWS--TQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRN 161
G W T ID + IT + V+ G +G E + RG + D
Sbjct: 190 GRKQWEKDTIIDRKYSYTITGAPRVFKGKVIIGNGGAEYGV--------RGYITAYDAGT 241
Query: 162 GRIIWQTYMLPDNGGK----------------RGGY----SGAAVWGS---SPAIDVIRR 198
G W+ + +P + + G Y G W + P ++++
Sbjct: 242 GEQKWRWFTVPGDPSRPFEDESMAAAAKTWDPSGKYWEAGGGGTAWDTLAFDPELNLMYV 301
Query: 199 QKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDC 258
N + ++Y SIVAL+ D+G+ W +
Sbjct: 302 GTGNGAPWSHSKRSPAGGDNLYLASIVALNPDTGKYVW------------------HYQE 343
Query: 259 PPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
PG N D + +L + +G+ R V++ K+GF + DR +G I
Sbjct: 344 TPGDNWDYTSAQPMILADLKLDGQMRKVILHAPKNGFFFVIDRTNGKFI 392
>gi|429215446|ref|ZP_19206606.1| methanol/ethanol family PQQ-dependent dehydrogenase [Pseudomonas
sp. M1]
gi|428153853|gb|EKX00406.1| methanol/ethanol family PQQ-dependent dehydrogenase [Pseudomonas
sp. M1]
Length = 706
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 82/350 (23%), Positives = 137/350 (39%), Gaps = 72/350 (20%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAGKD--ISATPAVANGVVYFPSWNG 58
W++ G +RY+ E +N V L L W + G D + ATP V +GV+Y S
Sbjct: 41 WMSTGRTYGEQRYSPLE-QVNEQNVGQLGLAWDYGFGLDRVVEATPLVVDGVMYTTSAYS 99
Query: 59 YLYAVNAFNGALIWEQNLSKLTGLSGTG---------------IVVNVTVAVVVAVSRSN 103
++A++A G L+W+ + G+ G+G + V V + A+ +
Sbjct: 100 IVHALDARTGKLLWQYDPGVYRGIQGSGCCDAANRGVAVWNGKVYVGVYDGRLEALDARS 159
Query: 104 GELVWS--TQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRN 161
G+ VWS T +D IT + + G +G E + RG + D
Sbjct: 160 GQRVWSVDTVLDHARNYTITGAPRIIKGKVVIGNGGSEFGV--------RGYVTAYDAET 211
Query: 162 GRIIWQTYMLP---------------------DNGGKRGGYSGAAVWGS---SPAIDVIR 197
G W+ + +P D K+GG G VW S +D++
Sbjct: 212 GAQAWRFFTVPGDPAQGDETDTIGMIRKTWFGDQYWKQGG--GGTVWDSMAYDAELDLLY 269
Query: 198 RQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPD 257
N Q +++ +SIVA+ D+G+ W Y T
Sbjct: 270 LGVGNGSFWNYGQRSQGKGDNLFLSSIVAVRPDTGQYVW---------HYQTT------- 313
Query: 258 CPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
PG D + M+ T++ +G+ R VV+ K+GF + D +G ++
Sbjct: 314 --PGDAWDYTATQHIMVATLAIDGKPRKVVMQAPKNGFFYVLDAATGKLL 361
>gi|392953727|ref|ZP_10319281.1| quinohemeprotein ethanol dehydrogenase [Hydrocarboniphaga effusa
AP103]
gi|391859242|gb|EIT69771.1| quinohemeprotein ethanol dehydrogenase [Hydrocarboniphaga effusa
AP103]
Length = 710
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 84/351 (23%), Positives = 138/351 (39%), Gaps = 73/351 (20%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSF--YAGKDISATPAVANGVVYFPSWNG 58
W +G D + R++ + IN V+ L L WS+ + + + ATP V GV+Y +
Sbjct: 56 WPANGLDYSGTRFSRLQ-QINADNVKRLGLAWSYDLESTRGVEATPIVTGGVMYVTASWS 114
Query: 59 YLYAVNAFNGALIW--EQNLSKLTGLSGTGIVVNVTVAV-------------VVAVSRSN 103
++A++A +G +W + + + VVN VAV ++A+ SN
Sbjct: 115 VVHAIDARSGKRLWTYDPKVPRDKAYKACCDVVNRGVAVEDGKVFVGSLDGRLIALDASN 174
Query: 104 GELVWS--TQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRN 161
G+ +W T ID +T + V+ G +G E + RG + DV +
Sbjct: 175 GKKLWEQDTIIDHTHAYTVTGAPRVFKGKVIIGNGGAEFGV--------RGYITAYDVAS 226
Query: 162 GRIIWQTYMLPDNGGK----------------------RGGYSGAAVWGS---SPAIDVI 196
G+ W+ + +P + K GG G VW S P ++++
Sbjct: 227 GKQRWRWFTVPGDPSKPFEDESMAKAAKTWDPSAKYWENGG--GGTVWNSMVFDPELNLM 284
Query: 197 RRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNP 256
N ++Y SIVALD D+G W +
Sbjct: 285 YVGTGNGAPWSHRQRSPAGGDNLYLASIVALDPDTGAYVW------------------HY 326
Query: 257 DCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
PG N D + +L I +G+ R VV+ K+GF + DR +G I
Sbjct: 327 QETPGDNWDYTSVQDLILADIKLDGKARKVVLHAPKNGFFFVVDRTNGQFI 377
>gi|119900154|ref|YP_935367.1| putative quinoprotein ethanol dehydrogenase [Azoarcus sp. BH72]
gi|119672567|emb|CAL96481.1| putative quinoprotein ethanol dehydrogenase [Azoarcus sp. BH72]
Length = 556
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 85/320 (26%), Positives = 132/320 (41%), Gaps = 71/320 (22%)
Query: 20 INPVTVRNLRLRWSFYAG---KDISATPAVANGVVYFPSWNGYLYAVNAFNGALIW--EQ 74
IN V+ L++ W G + ATP V +GV+Y+ S N ++AV+A GA +W E
Sbjct: 56 INKDNVKRLKVAWVHQPGNITHGLQATPIVIDGVLYYVSANNNVWAVDAATGATLWHYEP 115
Query: 75 NLSKLTGLS-----------GTGIVVNVTV-AVVVAVSRSNGELVWSTQIDPRPRSQI-- 120
LS L S G G V T+ VA+ + G+ +WSTQ+ ++Q
Sbjct: 116 KLSPLAKQSFYAAASRGVTVGRGKVYLGTLDGRFVALDQKTGKELWSTQLSDL-KTQYGA 174
Query: 121 ------TMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDN 174
++G+V G G DQ G + +D +G+ +W +L D+
Sbjct: 175 LFSAPPQLAGNVLFGGTTGG----------DQPIM--GKIYAVDADSGKPVWTFDVLKDD 222
Query: 175 GGKRGGYSGAAVWGSS-------PAIDVIRRQKQNNQTTKPTHPDQCISSD-IYANSIVA 226
G S A GS+ P D I N P + + D Y S++A
Sbjct: 223 PASWPGDSRKAGGGSAWMPGTYDPRSDTIYIGTSN---AAPDYYNAERKGDNKYTASLLA 279
Query: 227 LDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDV 286
LD SG++ WA+ +D + DF A L + +G +DV
Sbjct: 280 LDPKSGKLKWARQEVPHDSW--------------------DFDSAYEALMVKKDG--KDV 317
Query: 287 VVAVQKSGFAWAFDRDSGDI 306
+V + K GF + D+D G +
Sbjct: 318 IVHLNKGGFVFVMDKDDGSL 337
>gi|154251759|ref|YP_001412583.1| Pyrrolo-quinoline quinone [Parvibaculum lavamentivorans DS-1]
gi|154155709|gb|ABS62926.1| Pyrrolo-quinoline quinone [Parvibaculum lavamentivorans DS-1]
Length = 738
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 85/348 (24%), Positives = 129/348 (37%), Gaps = 70/348 (20%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYA--GKDISATPAVANGVVYFPSWNG 58
WL HG + +R++ + I P + L L W+ + + ATP V +G +Y G
Sbjct: 79 WLAHGRTYDEQRFSPLD-QITPENIGQLSLAWALDTDTARGLEATPIVVDGTMYMSLIWG 137
Query: 59 YLYAVNAFNGALIW--EQNLSKLTGLSGTGIVVNVTVAV-------------VVAVSRSN 103
AV+A +G +W + + G G VVN VAV + A+ +
Sbjct: 138 ITIAVDAKSGEELWRFDPEVPGEWGRYGCCDVVNRGVAVWKGRVYVASFDGRLFALDAKD 197
Query: 104 GELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGR 163
G +VW P IT + V+ +G E + RG + D G
Sbjct: 198 GSVVWEVNTIPGAPYTITGAPRVFDDMVVIGNGGGEYGV--------RGYITAYDTETGE 249
Query: 164 IIWQTYMLPDN------------------GG---KRGGYSGAAVWGS---SPAIDVIRRQ 199
W+ Y +P + GG K GG G W S P +
Sbjct: 250 ERWRFYTVPGDPSLPLEHPELEAAVPTWKGGEWWKVGG--GGTAWDSMVYEPETGTLFVG 307
Query: 200 KQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCP 259
N ++Y +SI+ALD +GR+ W +Y T
Sbjct: 308 TGNGSPWTREIRSPGGGDNLYISSILALDAKTGRMKW---------YYQTT--------- 349
Query: 260 PGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
PG N D + ML I G R V++ K+GF + DR++G +I
Sbjct: 350 PGDNWDYTATQPLMLADIEIGGEPRKVIMQAPKNGFFYVLDRETGKLI 397
>gi|75765562|pdb|1YIQ|A Chain A, Molecular Cloning And Structural Analysis Of
Quinohemoprotein Alcohol Dehydrogenase Adhiig From
Pseudomonas Putida Hk5. Compariison To The Other
Quinohemoprotein Alcohol Dehydrogenase Adhiib Found In
The Same Microorganism
Length = 689
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 82/350 (23%), Positives = 138/350 (39%), Gaps = 72/350 (20%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAGKD--ISATPAVANGVVYFPSWNG 58
W++ G + +RY+ + I+ V L L WS+ D + ATP V +GV+Y
Sbjct: 22 WMSTGRTYDEQRYSPLK-QISDQNVGQLGLAWSYKLDLDRGVEATPIVVDGVMYTTGPFS 80
Query: 59 YLYAVNAFNGALIWEQNLSKLTGLSGTGI--VVNVTVAV-------------VVAVSRSN 103
+YA++A +G LIW+ + +G VN VAV + A+
Sbjct: 81 VVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAVWKGKVYVGVLDGRLEAIDAKT 140
Query: 104 GELVWS--TQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRN 161
G+ WS T+ D + IT + V G +G E + RG + D
Sbjct: 141 GQRAWSVDTRADHKRSYTITGAPRVVNGKVVIGNGGAEFGV--------RGYVTAYDAET 192
Query: 162 GRIIWQTYMLP---------------------DNGGKRGGYSGAAVWGS---SPAIDVIR 197
G+ W+ Y +P D ++GG G W S P ++++
Sbjct: 193 GKEAWRFYTVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGG--GGTAWDSFAYDPELNLLY 250
Query: 198 RQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPD 257
N P Q +++ +SIVA++ D+G W Y T
Sbjct: 251 IGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVW---------HYQTT------- 294
Query: 258 CPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
PG D + +L + +G+ R V++ K+GF + DR +G+++
Sbjct: 295 --PGDAWDYTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGELL 342
>gi|374371922|ref|ZP_09629832.1| quinohemoprotein ethanol dehydrogenase type-1 [Cupriavidus
basilensis OR16]
gi|373096550|gb|EHP37761.1| quinohemoprotein ethanol dehydrogenase type-1 [Cupriavidus
basilensis OR16]
Length = 733
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 80/349 (22%), Positives = 135/349 (38%), Gaps = 69/349 (19%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSF--YAGKDISATPAVANGVVYFPSWNG 58
W ++G D R++ IN V++L L WS+ + + + ATP V NG++Y +
Sbjct: 80 WPSYGLDYAETRFSRLS-QINADNVKDLGLAWSYDLESTRGVEATPLVVNGIMYVSASWS 138
Query: 59 YLYAVNAFNGALIW--EQNLSKLTGLSGTGIVVNVTVAV-------------VVAVSRSN 103
++A++ +G IW + + K G G VVN VA+ ++A+
Sbjct: 139 VVHAIDTRSGKRIWTFDPKVDKSIGYKGCCDVVNRGVALYQGKVFVASYDGRLIALDAGT 198
Query: 104 GELVWS--TQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRN 161
G +W T ID IT + V+ G +G E + RG + D
Sbjct: 199 GRKLWEKDTIIDRTHSYTITGAPRVFKGKVIIGNGGAEYGV--------RGYVTAYDAGT 250
Query: 162 GRIIWQTYMLPDNGGK----------------RGGY----SGAAVWGS---SPAIDVIRR 198
G W+ + +P + K G Y G W + P ++++
Sbjct: 251 GEQKWRWFTVPGDPSKPFEDESMAKAAKTWDPAGKYWEAGGGGTAWDTLAFDPELNLMYV 310
Query: 199 QKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDC 258
N + ++Y SIVALD D+G+ W +
Sbjct: 311 GTGNGSPWSRSKRSPAGGDNLYLASIVALDPDTGKYVW------------------HYQE 352
Query: 259 PPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
PG N D + +L ++ G+ R V++ K+GF + DR +G I
Sbjct: 353 TPGDNWDYTSTQPMILADLNIGGKARKVILHAPKNGFFFVIDRTNGQFI 401
>gi|285808589|gb|ADC36109.1| pyrrolo-quinoline quinone [uncultured bacterium 126]
Length = 532
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 76/333 (22%), Positives = 133/333 (39%), Gaps = 56/333 (16%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFY--AGKDISATPAVANGVVYFPSWNG 58
W+ + GD + RR++ I V+NL L W + G + ATP G++YF + N
Sbjct: 47 WVTYNGDYSGRRFS-PLTKITAANVKNLSLAWIYDLPGGGTVKATPLQVGGILYFTTPN- 104
Query: 59 YLYAVNAFNGALIWEQNLSK-----LTGLSGTGIVVNVTVAV-----VVAVSRSNGELVW 108
++YAV+A +W ++ L G G I+ + V +VA+ G W
Sbjct: 105 HVYAVDARTAREVWHYTFARSRGGILIGNRGVAILGDTVYFVTTDCNLVALDLKTGTEKW 164
Query: 109 STQIDPRPRSQITMSGSVYMGAFYVGLSSLEEAL-PADQCCTFRGSLAKLDVRNGRIIWQ 167
+ + + M +Y G+ + + L P+ L + +NG +IW+
Sbjct: 165 AKEF-----CSLEM---MYYGSIAPVVVKDKLILGPSGDDLDVPAYLEARNPQNGDLIWR 216
Query: 168 TYMLPDNGGKRG----------GYSGAAVWGS---SPAIDVIRRQKQNNQTTKPTHPDQC 214
Y+ P G G + G W P +++I N Q +
Sbjct: 217 WYVTPQKEGDEGLDTWPNLDMAKHGGGMTWQPITYDPELNLIYVTTGNPQPVVAFKNRK- 275
Query: 215 ISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPML 274
+++Y SIVAL+ D+G++ W YF P D D +A ++
Sbjct: 276 -GANLYTASIVALNADTGKMVW----------YF--------QSSPNDTHDWDATQAAVV 316
Query: 275 LTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
+ NG+ R ++ ++G + DR +G I
Sbjct: 317 FDGTINGQSRKLIAQASRNGQFFVLDRTNGKAI 349
>gi|410646875|ref|ZP_11357320.1| alcohol dehydrogenase [cytochrome c] [Glaciecola agarilytica NO2]
gi|410133579|dbj|GAC05719.1| alcohol dehydrogenase [cytochrome c] [Glaciecola agarilytica NO2]
Length = 716
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 90/352 (25%), Positives = 140/352 (39%), Gaps = 78/352 (22%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSF--YAGKDISATPAVANGVVYFPSWNG 58
WL+HG +RY+ + IN L L WSF + + ATP V +GV+Y
Sbjct: 62 WLSHGRTYKEQRYSTLDK-INLGNASKLGLSWSFDLEGTRGLEATPIVVDGVMYVTGNWS 120
Query: 59 YLYAVNAFNGALIWEQN--LSKLTGLSGTGIVVNVTVAV-------------VVAVSRSN 103
+YA+NA G +W+ + + + VVN VAV +VAV+ +
Sbjct: 121 KVYALNAVTGEQLWKYDPKVPPEWAVHLCCDVVNRGVAVWENKVYVGTLDGRLVAVNAKD 180
Query: 104 GELVWSTQIDP--RPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRN 161
G LVW Q P +P S IT + V G +G E + RG ++ D R
Sbjct: 181 GSLVWEVQTTPTDKPYS-ITGAPRVVKGNVIIGNGGGEFGV--------RGFVSAYDGRT 231
Query: 162 GRIIWQTYMLPDNGGK--------------RGGY----SGAAVWGSSP--------AIDV 195
G+ W+ Y +P + K +G + G VW S + V
Sbjct: 232 GQQKWRFYTVPGDPAKPFENPILEMAAKTWKGEWWTLGGGGTVWDSMAYDSELNLLYVGV 291
Query: 196 IRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNN 255
N Q P D +++ +SIVA+ D+G W Y T
Sbjct: 292 GNGSPWNQQIRSPGGGD-----NLFLSSIVAVRPDTGEYVW---------HYQTT----- 332
Query: 256 PDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
PG + D + +L + G+ R V++ K+GF + DR++G+ +
Sbjct: 333 ----PGESWDYTAAQQMILAELELEGQKRKVIMQAPKNGFFYVLDRETGEFL 380
>gi|421603643|ref|ZP_16045998.1| putative alcohol dehydrogenase [Bradyrhizobium sp. CCGE-LA001]
gi|404264253|gb|EJZ29578.1| putative alcohol dehydrogenase [Bradyrhizobium sp. CCGE-LA001]
Length = 537
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 77/309 (24%), Positives = 121/309 (39%), Gaps = 57/309 (18%)
Query: 20 INPVTVRNLRLRWSFYAG--KDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWE---- 73
IN V+NL W+F G + A P V NG ++ + G + A+NA G W
Sbjct: 27 INTSNVKNLTPVWTFATGVVEGHQAPPIVNNGAMFVTTPMGQVIALNAKTGDEYWRYKRQ 86
Query: 74 --QNLSKL------TGLSGTGIVVNVTVAVVVAVSRSNGELVWSTQI-DPRPRSQITMSG 124
+L +L GL + + T VVA+ G+++W T++ D R +T+
Sbjct: 87 LPDDLFQLHPTNRGVGLWEDKLYLATTDDHVVALDAKTGKVLWDTKVQDYRKGQYLTLMP 146
Query: 125 SVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNG--------G 176
+ G VG S E + RG + D ++G+ +W+TY +P G G
Sbjct: 147 LIVDGKVIVGGSGGEFGV--------RGYVVAYDAKDGKELWRTYTIPGEGEPGHDTWQG 198
Query: 177 KRGGYSGAAVWGSSPAIDVIRRQKQNNQTTKP----THPDQCISSDIYANSIVALDIDSG 232
G + W + + P THP ++Y S++ALD D+G
Sbjct: 199 DDWKNGGGSAWMTGNYDKETKTIYWGIGNAAPWPGETHP----GDNLYTASVLALDPDTG 254
Query: 233 RIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQK 292
+I T + D D D EAPML+ + NGR +V +
Sbjct: 255 KIK-------------THFQYHQNDS-----WDWDEVEAPMLIDLQRNGRTIKSLVHPGR 296
Query: 293 SGFAWAFDR 301
W +R
Sbjct: 297 DAIFWVLER 305
>gi|75450426|sp|Q934G0.1|LUH_PSESP RecName: Full=Lupanine 17-hydroxylase [cytochrome c]; AltName:
Full=Quinohemoprotein lupanine hydroxylase; Flags:
Precursor
gi|15485646|emb|CAC67410.1| lupanine hydroxylase [Pseudomonas sp. DH2001]
Length = 695
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 84/341 (24%), Positives = 132/341 (38%), Gaps = 67/341 (19%)
Query: 9 NNRRYAYGEVLINPVTVRNLRLRW--SFYAGKDISATPAVANGVVYFPSWNGYLYAVNAF 66
N + Y +N V+NL L W AG + P VA+GV+Y G +YA +
Sbjct: 46 NEQHYFSALKDVNKSNVKNLGLSWFTDMEAGDGLVGNPLVADGVIYQGGPPGKIYANDLK 105
Query: 67 NGALIW----EQNLSKLTGLSGT-GIVVNVTVAV------------VVAVSRSNGELVWS 109
G +W E K T +G G VN +AV ++AVSR+ +L WS
Sbjct: 106 TGKNLWTYTPEVQYDKDTSWTGFWGTHVNRGLAVDDDNVYIGSYCKLLAVSRTTHKLTWS 165
Query: 110 TQ-IDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQT 168
+Q DP+ IT + V G ++G +S + D RG L D + G+ +W+
Sbjct: 166 SQSCDPKKMQAITGAPRVGGGKVFIGNASGD--FGGD-----RGHLDAFDAKTGKHLWRF 218
Query: 169 YMLPDNGGK----------------------RGGYSGAAVWGSSPAIDVIRRQKQNNQTT 206
Y +P + K +GG S A D +
Sbjct: 219 YTMPGDPSKPFENDLLAKASKTWGTDYWKYTKGGVSPWDAITYDEASDTLYFGTDGPSPW 278
Query: 207 KPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDA 266
P +++++SI+A+D +G W +F V N+ G N+ A
Sbjct: 279 SPAQRAPDAGDELFSHSIIAVDASTGAYKW----------HFQT-VQND-----GSNMSA 322
Query: 267 DFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
ML + G + VV+ K+G+ + D +G I
Sbjct: 323 TM--HIMLADLPVEGVSKRVVMTAPKNGYFYVLDASTGKFI 361
>gi|39936251|ref|NP_948527.1| alcohol dehydrogenase [Rhodopseudomonas palustris CGA009]
gi|39650106|emb|CAE28629.1| alcohol dehydrogenase [Rhodopseudomonas palustris CGA009]
Length = 724
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 81/351 (23%), Positives = 134/351 (38%), Gaps = 73/351 (20%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAGKD--ISATPAVANGVVYFPSWNG 58
W ++G D R++ + IN V+ L L+WS+ G + + ATP V +G++Y +
Sbjct: 76 WPSYGLDYAETRFSKLD-QINTENVKQLGLQWSYSLGSERGVEATPVVVDGIMYVTASWS 134
Query: 59 YLYAVNAFNGALIW--EQNLSKLTGLSGTGIVVNVTVAV-------------VVAVSRSN 103
++A++ G +W + + G G VVN VA+ ++A+ +
Sbjct: 135 VVHAIDTRTGKKLWTFDPKVDHSKGYRGCCDVVNRGVALYKGKVFVGAYDGRLIALDAAT 194
Query: 104 GELVWS--TQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRN 161
G W T ID IT + V+ G +G E RG + D
Sbjct: 195 GSKAWEIDTLIDHEHSYTITGAPRVFNGKVVIGNGGAEYGA--------RGYVTAYDAET 246
Query: 162 GRIIWQTYMLP-------------------DNGGK---RGGYSGAAVWGS---SPAIDVI 196
G+ W+ + +P D GK GG G W + P +++I
Sbjct: 247 GKQAWRWFTVPGDPSKPFEDESMEKAAKTWDPAGKWWLNGG--GGTAWDTITFDPDLNLI 304
Query: 197 RRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNP 256
N ++Y SIVAL+ D+G+ W +
Sbjct: 305 YVGTGNGSPWNRHLRSPAGGDNLYLASIVALNADTGKYVW------------------HY 346
Query: 257 DCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
PG N D + +L I+ +G+ R V++ K+GF + DR G I
Sbjct: 347 QETPGDNWDYTSTQPMILADIAIDGKPRKVILHAPKNGFFFVIDRTDGKFI 397
>gi|254281934|ref|ZP_04956902.1| alcohol dehydrogenase (acceptor) [gamma proteobacterium NOR51-B]
gi|219678137|gb|EED34486.1| alcohol dehydrogenase (acceptor) [gamma proteobacterium NOR51-B]
Length = 702
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 82/349 (23%), Positives = 138/349 (39%), Gaps = 71/349 (20%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWS--FYAGKDISATPAVANGVVYFPSWNG 58
W+ HG + +R++ + IN TV + W + + + ATP V +GV+Y S
Sbjct: 53 WIAHGRTYDEQRFSPLDS-INRETVPRMGFAWQQDMASTRGLEATPIVVDGVMYTTSTWS 111
Query: 59 YLYAVNAFNGALIWE--QNLSKLTGLSGTGIVVNVTVAV-------------VVAVSRSN 103
+ A++A +G ++W+ + + G VVN VAV ++A+ +
Sbjct: 112 RVTALDARSGEVLWQFDPEVDRAWGKKLCCDVVNRGVAVWKGRVYFGTLDGYLIALDAAT 171
Query: 104 GELVW--STQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRN 161
G+LVW T I+ IT + + G +G E RG ++ D +
Sbjct: 172 GDLVWRVDTLINRDAWYSITGAPRIVKGKVIIGNGGAE--------FQVRGYISAFDAES 223
Query: 162 GRIIWQTYMLPDNGGKRGGY------SGAAVWGSS-----------------PAIDVIRR 198
G + W+ Y +P GG G + + AA W + P +D++
Sbjct: 224 GDLDWRFYTVP--GGPEGPFEHPELEAAAATWDKNSDWTGVGGTAWDSMAYDPDLDLLYI 281
Query: 199 QKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDC 258
N ++Y SI+AL D+GR+ W Y T
Sbjct: 282 GTGNGSPWPQYVRSPEGGDNLYLASILALRPDTGRLVW---------HYQTV-------- 324
Query: 259 PPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
PG D + +L + G R V++ K+GF + DR SG++I
Sbjct: 325 -PGDAWDFTATQHIILADLEIEGELRKVLLQAPKNGFFYVIDRASGELI 372
>gi|398826575|ref|ZP_10584815.1| PQQ-dependent dehydrogenase, methanol/ethanol family
[Bradyrhizobium sp. YR681]
gi|398220772|gb|EJN07208.1| PQQ-dependent dehydrogenase, methanol/ethanol family
[Bradyrhizobium sp. YR681]
Length = 579
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 71/305 (23%), Positives = 121/305 (39%), Gaps = 49/305 (16%)
Query: 20 INPVTVRNLRLRWSFYAG--KDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWE---- 73
IN V+ L W+F G + A P V NGV++ + G + A+NA G W
Sbjct: 68 INASNVKGLTPVWTFATGVVEGHEAPPIVNNGVMFVATPMGQVIAINAKTGDEYWRYKRQ 127
Query: 74 --------QNLSKLTGLSGTGIVVNVTVAVVVAVSRSNGELVWSTQIDPRPRSQ-ITMSG 124
S+ GL + + T VVA+ G++VW T++ + Q +T+
Sbjct: 128 LPDDLFQLHPTSRGVGLWEDKLYLATTDDHVVALDAKTGKVVWDTKVQDYKKGQYMTLMP 187
Query: 125 SVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNG--------G 176
+ G VG S E + RG +A D ++G+ +W+TY +P G G
Sbjct: 188 LIVDGKVIVGGSGGEFGV--------RGYVAAYDAKDGKELWRTYTIPGEGEPGHDTWQG 239
Query: 177 KRGGYSGAAVWGSSPAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAW 236
+ G + W + + P + ++Y +S++ALD ++G+I
Sbjct: 240 EDWKNGGGSAWMTGNYDKDTKTIYWGVGNAAPWPGEMHPGDNLYTSSVLALDPNNGKIK- 298
Query: 237 AKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFA 296
Y ++ + D D EAPML+ + +GR +V +
Sbjct: 299 -----TYHQYH------------QNDSWDWDEVEAPMLIDLQRDGRSIKSLVHPGRDAIF 341
Query: 297 WAFDR 301
W +R
Sbjct: 342 WVLER 346
>gi|192291971|ref|YP_001992576.1| PQQ-dependent dehydrogenase [Rhodopseudomonas palustris TIE-1]
gi|192285720|gb|ACF02101.1| PQQ-dependent dehydrogenase, methanol/ethanol family
[Rhodopseudomonas palustris TIE-1]
Length = 724
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 81/351 (23%), Positives = 134/351 (38%), Gaps = 73/351 (20%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAGKD--ISATPAVANGVVYFPSWNG 58
W ++G D R++ + IN V+ L L+WS+ G + + ATP V +G++Y +
Sbjct: 76 WPSYGLDYAETRFSKLD-QINTDNVKQLGLQWSYSLGSERGVEATPVVVDGIMYVTASWS 134
Query: 59 YLYAVNAFNGALIW--EQNLSKLTGLSGTGIVVNVTVAV-------------VVAVSRSN 103
++A++ G +W + + G G VVN VA+ ++A+ +
Sbjct: 135 VVHAIDTRTGKKLWTFDPKVDHSKGYRGCCDVVNRGVALYKGKVFVGAYDGRLIALDAAT 194
Query: 104 GELVWS--TQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRN 161
G W T ID IT + V+ G +G E RG + D
Sbjct: 195 GSKAWEIDTLIDHEHSYTITGAPRVFNGKVVIGNGGAEYGA--------RGYVTAYDAET 246
Query: 162 GRIIWQTYMLP-------------------DNGGK---RGGYSGAAVWGS---SPAIDVI 196
G+ W+ + +P D GK GG G W + P +++I
Sbjct: 247 GKQAWRWFTVPGDPSKPFEDESMEKAAKTWDPAGKWWLNGG--GGTAWDTITFDPDLNLI 304
Query: 197 RRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNP 256
N ++Y SIVAL+ D+G+ W +
Sbjct: 305 YVGTGNGSPWNRHLRSPAGGDNLYLASIVALNADTGKYVW------------------HY 346
Query: 257 DCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
PG N D + +L I+ +G+ R V++ K+GF + DR G I
Sbjct: 347 QETPGDNWDYTSTQPMILADIAIDGKPRKVILHAPKNGFFFVIDRTDGKFI 397
>gi|110635223|ref|YP_675431.1| Pyrrolo-quinoline quinone [Chelativorans sp. BNC1]
gi|110286207|gb|ABG64266.1| Pyrrolo-quinoline quinone [Chelativorans sp. BNC1]
Length = 583
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 87/348 (25%), Positives = 142/348 (40%), Gaps = 64/348 (18%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSF-YAGKDISAT-PAVANGVVYFPSWNG 58
WL+ G NN+ Y+ + LIN TV +L L W++ A I T P + +G+++ + N
Sbjct: 46 WLSFRGAYNNQGYSKLD-LINKDTVDDLELAWAWPMAEAGIQETAPLIHDGILFLQTNNN 104
Query: 59 YLYAVNAFNGALIWE--QNLSKL-----------------TGLSGTGIVVNVTVAVVVAV 99
+ A++A G IW L +L L +V+ A +V +
Sbjct: 105 IVEALDAKTGDRIWTYIHELPELPASWSYQLNQARRQKASIALYQDKVVLTTVDAKIVVL 164
Query: 100 SRSNGELVWSTQI-DPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLD 158
+ +G++VW Q+ D T+ V +S A A C D
Sbjct: 165 NALDGKVVWEKQVLDYNKGYSYTVGPIVVDNKIISAISGCSIAGTAGGCYILAH-----D 219
Query: 159 VRNGRIIWQ--TYMLPDNGGKRGGYSGAA---VWGSSPAIDVIRRQKQNNQTT-----KP 208
G +W+ T PDN ++ + WG +P I +TT P
Sbjct: 220 FETGEELWRFNTINDPDNPEQQASWGEVPPENRWGGTPW--TIGSYDPETRTTFWGIGMP 277
Query: 209 THPDQCIS-----SDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPN 263
+ I S +Y NS +ALDID+G++ W Y+ L +N D
Sbjct: 278 GPYSELIRGSGDGSVLYTNSTIALDIDTGKLKW----------YYQHLPRDNWD------ 321
Query: 264 LDADFGEAPMLLTISTNGRFRDVVVAVQ-KSGFAWAFDRDSGDIIWFK 310
LD+ F +L+ +G + ++V V K+G A+ DR++G +W K
Sbjct: 322 LDSPFER--ILVDQEVDGEVKKMLVTVAGKNGIAFGLDRETGKYLWHK 367
>gi|339325822|ref|YP_004685515.1| quinoprotein ethanol dehydrogenase ExaA [Cupriavidus necator N-1]
gi|338165979|gb|AEI77034.1| quinoprotein ethanol dehydrogenase ExaA [Cupriavidus necator N-1]
Length = 576
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 81/363 (22%), Positives = 135/363 (37%), Gaps = 81/363 (22%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAG--KDISATPAVANGVVYFPSWNG 58
WL+ G RY + IN V LR + F + + P V NGV++ +
Sbjct: 63 WLHSNGSYVQMRY-HPAAQINTKNVARLRPAFIFQTAVMESMETAPIVVNGVMFLTTSYN 121
Query: 59 YLYAVNAFNGALIW--EQNLSKLT-----------GLSGTGIVVNVTVAVVVAVSRSNGE 105
++YA++A G W + + +T +SG + + A +VA+ G+
Sbjct: 122 HVYAIDAVTGKEFWHYKHKMGPVTTFCCGPNNRGVAISGDRLYMGTLDAKLVALDARTGK 181
Query: 106 LVWSTQI-DPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRI 164
L+W TQI DP TM+ V +G + E + RG + +G++
Sbjct: 182 LLWETQIADPELGYSETMAPVVVDDKVLIGTNGGEYGI--------RGFVKAFSTTDGKL 233
Query: 165 IW------------------------------QTYMLPDNGGKRGGYSGAAVWGSSPAID 194
+W + ML D GG G VW +PA+D
Sbjct: 234 LWTFHTIPEKGHEGVWATKDATGRDMKRDIAAEKKMLADKGGDFYKTLGGGVW-MAPAVD 292
Query: 195 VIRRQKQNNQTTKPTHPDQCIS----SDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTC 250
R K PD + ++Y +S+VA+D+++G W +D++
Sbjct: 293 --RANKLAIFVVGNPSPDLYGAIRPGDNLYTDSLVAVDLNTGAYKWHSQYIAHDVW---- 346
Query: 251 LVPNNPDCPPGPNLDADFGEAPMLLTI-STNGRFRDVVVAVQKSGFAWAFDRDSGDIIWF 309
D D P+L+ + G+ V+ K+G + DR G +I F
Sbjct: 347 --------------DLDAASPPILVDVRDEKGQMIPGVIHGGKTGHVYVHDRRDGRLIRF 392
Query: 310 KLA 312
A
Sbjct: 393 SQA 395
>gi|338741671|ref|YP_004678633.1| alcohol dehydrogenase [Hyphomicrobium sp. MC1]
gi|337762234|emb|CCB68069.1| Alcohol dehydrogenase [cytochrome c] [Hyphomicrobium sp. MC1]
Length = 708
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 74/348 (21%), Positives = 134/348 (38%), Gaps = 70/348 (20%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRW--SFYAGKDISATPAVANGVVYFPSWNG 58
WL +G + +R++ + IN ++L L W + + TP +G ++ +
Sbjct: 61 WLTYGRTYSEQRFSPLKG-INDKNAKDLGLAWYANLETNRGQEGTPLAIDGKLFVSTAWS 119
Query: 59 YLYAVNAFNGALIWEQN--LSKLTGLSGTGIVVNVTVAV-------------VVAVSRSN 103
+ A + GAL+W + + + G+ G VN VA ++A+
Sbjct: 120 IVKAYDGKTGALLWSYDPLVPRAKGVDGCCDFVNRGVAAWNGKIYIATFDGRLIALDEKT 179
Query: 104 GELVWST-QIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNG 162
G+ VWS +DP+ +T + V G ++G+S E + RG + D G
Sbjct: 180 GKPVWSVLTVDPKAPMTLTQAPRVANGRVFLGVSGAEYHI--------RGYTSAYDAETG 231
Query: 163 RIIWQTYMLPDNGGKR--------------------GGYSGAAVWGS---SPAIDVIRRQ 199
++ W+ Y +P + K GG G +VW + P ++ +
Sbjct: 232 KLDWRFYTIPGDPSKPFENKAMEMAAKTWDGEWWKVGG--GGSVWDAISYDPELNYVYFG 289
Query: 200 KQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCP 259
N + +++ +SI+AL D+G W +
Sbjct: 290 TGNGLEWNHAVRSRGEGDNLFVSSIIALKADTGEYVW------------------HYQVT 331
Query: 260 PGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
PG D D + M + GR R V++ K+GF + DR +G +I
Sbjct: 332 PGEEWDYDAVQQLMQADLKIYGRTRKVLMQANKNGFFYVLDRKTGKLI 379
>gi|421501699|ref|ZP_15948656.1| Pyrrolo-quinoline quinone [Pseudomonas mendocina DLHK]
gi|400347442|gb|EJO95795.1| Pyrrolo-quinoline quinone [Pseudomonas mendocina DLHK]
Length = 695
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 86/350 (24%), Positives = 137/350 (39%), Gaps = 73/350 (20%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRW--SFYAGKDISATPAVANGVVYFP-SWN 57
WL+HG +R++ I+ V L L W + + ATP V++GV+Y SW+
Sbjct: 43 WLSHGRTYTEQRFSPLRQ-IDAGNVGKLGLAWYLDLENNRGLEATPLVSDGVLYASLSWS 101
Query: 58 GYLYAVNAFNGALIWEQNLSKLTGLSGTGI--VVNVTVAV-------------VVAVSRS 102
+ AV+ +G +W+ + G S VN VA+ ++A+
Sbjct: 102 RVM-AVDLRSGKRLWQFDPQVDRGRSRYACCDAVNRGVALWNGKVYVGALDGRLIALDAK 160
Query: 103 NGELVWSTQI-DPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRN 161
G VWS Q DP IT + V G +G E + RG + D
Sbjct: 161 TGREVWSEQTTDPAKPYSITGAPRVVKGKVIIGNGGAEYGV--------RGFFSAYDAET 212
Query: 162 GRIIWQTYMLP---------------------DNGGKRGGYSGAAVWGS---SPAIDVIR 197
G++ W+ Y +P D K GG G VW S P +D++
Sbjct: 213 GKMAWRFYTVPGDPAQPYEHPELAAAAKTWKGDQYWKLGG--GGTVWDSMAYDPELDLLY 270
Query: 198 RQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPD 257
N ++Y +SI+AL DSG++ W Y T
Sbjct: 271 IGTGNGSPWNREIRSPGGGDNLYLSSILALRPDSGKLLW---------HYQTT------- 314
Query: 258 CPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
PG D + +L T+ +G+ R V++ K+GF + DR +G+++
Sbjct: 315 --PGETWDFTATQQIILATLELDGKPRKVLMQAPKNGFFYVLDRATGELL 362
>gi|258541191|ref|YP_003186624.1| alcohol dehydrogenase large subunit [Acetobacter pasteurianus IFO
3283-01]
gi|384041112|ref|YP_005479856.1| alcohol dehydrogenase large subunit [Acetobacter pasteurianus IFO
3283-12]
gi|384049627|ref|YP_005476690.1| alcohol dehydrogenase large subunit [Acetobacter pasteurianus IFO
3283-03]
gi|384052737|ref|YP_005485831.1| alcohol dehydrogenase large subunit [Acetobacter pasteurianus IFO
3283-07]
gi|384055969|ref|YP_005488636.1| alcohol dehydrogenase large subunit [Acetobacter pasteurianus IFO
3283-22]
gi|384058610|ref|YP_005497738.1| alcohol dehydrogenase large subunit [Acetobacter pasteurianus IFO
3283-26]
gi|384061904|ref|YP_005482546.1| alcohol dehydrogenase large subunit [Acetobacter pasteurianus IFO
3283-32]
gi|384117980|ref|YP_005500604.1| alcohol dehydrogenase large subunit [Acetobacter pasteurianus IFO
3283-01-42C]
gi|421853118|ref|ZP_16285798.1| alcohol dehydrogenase large subunit [Acetobacter pasteurianus
subsp. pasteurianus LMG 1262 = NBRC 106471]
gi|256632269|dbj|BAH98244.1| alcohol dehydrogenase large subunit [Acetobacter pasteurianus IFO
3283-01]
gi|256635326|dbj|BAI01295.1| alcohol dehydrogenase large subunit [Acetobacter pasteurianus IFO
3283-03]
gi|256638381|dbj|BAI04343.1| alcohol dehydrogenase large subunit [Acetobacter pasteurianus IFO
3283-07]
gi|256641435|dbj|BAI07390.1| alcohol dehydrogenase large subunit [Acetobacter pasteurianus IFO
3283-22]
gi|256644490|dbj|BAI10438.1| alcohol dehydrogenase large subunit [Acetobacter pasteurianus IFO
3283-26]
gi|256647545|dbj|BAI13486.1| alcohol dehydrogenase large subunit [Acetobacter pasteurianus IFO
3283-32]
gi|256650598|dbj|BAI16532.1| alcohol dehydrogenase large subunit [Acetobacter pasteurianus IFO
3283-01-42C]
gi|256653589|dbj|BAI19516.1| alcohol dehydrogenase large subunit [Acetobacter pasteurianus IFO
3283-12]
gi|371478695|dbj|GAB31001.1| alcohol dehydrogenase large subunit [Acetobacter pasteurianus
subsp. pasteurianus LMG 1262 = NBRC 106471]
Length = 742
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 77/353 (21%), Positives = 131/353 (37%), Gaps = 68/353 (19%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFY--AGKDISATPAVANGVVYFPSWNG 58
WL++G + +RY+ + IN V +L+L W + + ATP V +G++Y +
Sbjct: 55 WLSYGRTYSEQRYSPLD-QINRSNVGDLKLAWYYTLDTNRGQEATPLVVDGIMYATTNWS 113
Query: 59 YLYAVNAFNGALIWEQNLSKLTGLSGTGIVVNVTVAV---------------VVAVSRSN 103
+ A++A G L+W+ + ++ G V +VA
Sbjct: 114 KMEALDAATGKLLWQYDPKVPGNIADKGCCDTVNRGAGYWNGKVFWGTFDGRLVAADAKT 173
Query: 104 GELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTF--RGSLAKLDVRN 161
G+ VW P S GA V + L + F RG ++ D
Sbjct: 174 GKKVWEVNTIPADASLGKQRSYTVDGAVRVAKGLV---LIGNGGAEFGARGFVSAFDAET 230
Query: 162 GRIIWQTYMLPDNG--------------------GKRGGY----SGAAVWGS---SPAID 194
G++ W+ Y +P+N G +G + G VW S P D
Sbjct: 231 GKLKWRFYTVPNNKNEPDHAASDNILMNKAYKTWGPKGAWVRQGGGGTVWDSLVYDPVSD 290
Query: 195 VIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPN 254
+I N + + I S+++ SIVAL ++G W D + +T +
Sbjct: 291 LIYLAVGNGSPWNYKYRSEGIGSNLFLGSIVALKPETGEYVWHFQATPMDQWDYTSV--- 347
Query: 255 NPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
+ M L + NG R V+V K+GF + D +G+ +
Sbjct: 348 ---------------QQIMTLDMPVNGEMRHVIVHAPKNGFFYVLDAKTGEFL 385
>gi|238069255|gb|ACR40096.1| alcohol dehydrogenase large subunit [Acetobacter pasteurianus NBRC
101655]
Length = 742
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 77/353 (21%), Positives = 131/353 (37%), Gaps = 68/353 (19%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFY--AGKDISATPAVANGVVYFPSWNG 58
WL++G + +RY+ + IN V +L+L W + + ATP V +G++Y +
Sbjct: 55 WLSYGRTYSEQRYSPLD-QINRSNVGDLKLAWYYTLDTNRGQEATPLVVDGIMYATTNWS 113
Query: 59 YLYAVNAFNGALIWEQNLSKLTGLSGTGIVVNVTVAV---------------VVAVSRSN 103
+ A++A G L+W+ + ++ G V +VA
Sbjct: 114 KMEALDAATGKLLWQYDPKVPGNIADKGCCDTVNRGAGYWNGKVFWGTFDGRLVAADAKT 173
Query: 104 GELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTF--RGSLAKLDVRN 161
G+ VW P S GA V + L + F RG ++ D
Sbjct: 174 GKKVWEVNTIPADASLGKQRSYTVDGAVRVAKGLV---LIGNGGAEFGARGFVSAFDAET 230
Query: 162 GRIIWQTYMLPDNG--------------------GKRGGY----SGAAVWGS---SPAID 194
G++ W+ Y +P+N G +G + G VW S P D
Sbjct: 231 GKLKWRFYTVPNNKNEPDHAASDNILMNKAYKTWGPKGAWVRQGGGGTVWDSLVYDPVSD 290
Query: 195 VIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPN 254
+I N + + I S+++ SIVAL ++G W D + +T +
Sbjct: 291 LIYLAVGNGSPWNYKYRSEGIGSNLFLGSIVALKPETGEYVWHFQATPMDQWDYTSV--- 347
Query: 255 NPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
+ M L + NG R V+V K+GF + D +G+ +
Sbjct: 348 ---------------QQIMTLDMPVNGEMRHVIVHAPKNGFFYVLDAKTGEFL 385
>gi|421849316|ref|ZP_16282298.1| alcohol dehydrogenase large subunit [Acetobacter pasteurianus NBRC
101655]
gi|371459954|dbj|GAB27501.1| alcohol dehydrogenase large subunit [Acetobacter pasteurianus NBRC
101655]
Length = 717
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 77/353 (21%), Positives = 131/353 (37%), Gaps = 68/353 (19%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFY--AGKDISATPAVANGVVYFPSWNG 58
WL++G + +RY+ + IN V +L+L W + + ATP V +G++Y +
Sbjct: 30 WLSYGRTYSEQRYSPLD-QINRSNVGDLKLAWYYTLDTNRGQEATPLVVDGIMYATTNWS 88
Query: 59 YLYAVNAFNGALIWEQNLSKLTGLSGTGIVVNVTVAV---------------VVAVSRSN 103
+ A++A G L+W+ + ++ G V +VA
Sbjct: 89 KMEALDAATGKLLWQYDPKVPGNIADKGCCDTVNRGAGYWNGKVFWGTFDGRLVAADAKT 148
Query: 104 GELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTF--RGSLAKLDVRN 161
G+ VW P S GA V + L + F RG ++ D
Sbjct: 149 GKKVWEVNTIPADASLGKQRSYTVDGAVRVAKGLV---LIGNGGAEFGARGFVSAFDAET 205
Query: 162 GRIIWQTYMLPDNG--------------------GKRGGY----SGAAVWGS---SPAID 194
G++ W+ Y +P+N G +G + G VW S P D
Sbjct: 206 GKLKWRFYTVPNNKNEPDHAASDNILMNKAYKTWGPKGAWVRQGGGGTVWDSLVYDPVSD 265
Query: 195 VIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPN 254
+I N + + I S+++ SIVAL ++G W D + +T +
Sbjct: 266 LIYLAVGNGSPWNYKYRSEGIGSNLFLGSIVALKPETGEYVWHFQATPMDQWDYTSV--- 322
Query: 255 NPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
+ M L + NG R V+V K+GF + D +G+ +
Sbjct: 323 ---------------QQIMTLDMPVNGEMRHVIVHAPKNGFFYVLDAKTGEFL 360
>gi|329114801|ref|ZP_08243558.1| PQQ-dependent Alcohol dehydrogenase large subunit [Acetobacter
pomorum DM001]
gi|326695932|gb|EGE47616.1| PQQ-dependent Alcohol dehydrogenase large subunit [Acetobacter
pomorum DM001]
Length = 742
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 77/353 (21%), Positives = 131/353 (37%), Gaps = 68/353 (19%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFY--AGKDISATPAVANGVVYFPSWNG 58
WL++G + +RY+ + IN V +L+L W + + ATP V +G++Y +
Sbjct: 55 WLSYGRTYSEQRYSPLD-QINRSNVGDLKLAWYYTLDTNRGQEATPLVVDGIMYATTNWS 113
Query: 59 YLYAVNAFNGALIWEQNLSKLTGLSGTGIVVNVTVAV---------------VVAVSRSN 103
+ A++A G L+W+ + ++ G V +VA
Sbjct: 114 KMEALDAATGKLLWQYDPKVPGNIADKGCCDTVNRGAGYWNGKVFWGTFDGRLVAADAKT 173
Query: 104 GELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTF--RGSLAKLDVRN 161
G+ VW P S GA V + L + F RG ++ D
Sbjct: 174 GKKVWEVNTIPADASLGKQRSYTVDGAVRVAKGLV---LIGNGGAEFGARGFVSAFDAET 230
Query: 162 GRIIWQTYMLPDNG--------------------GKRGGY----SGAAVWGS---SPAID 194
G++ W+ Y +P+N G +G + G VW S P D
Sbjct: 231 GKLKWRFYTVPNNKNEPDHAASDNILMSKAYKTWGPKGAWVRQGGGGTVWDSLVYDPVSD 290
Query: 195 VIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPN 254
+I N + + I S+++ SIVAL ++G W D + +T +
Sbjct: 291 LIYLAVGNGSPWNYKYRSEGIGSNLFLGSIVALKPETGEYVWHFQATPMDQWDYTSV--- 347
Query: 255 NPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
+ M L + NG R V+V K+GF + D +G+ +
Sbjct: 348 ---------------QQIMTLDMPVNGEMRHVIVHAPKNGFFYVLDAKTGEFL 385
>gi|224141363|ref|XP_002324042.1| predicted protein [Populus trichocarpa]
gi|222867044|gb|EEF04175.1| predicted protein [Populus trichocarpa]
Length = 95
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 46/77 (59%), Gaps = 19/77 (24%)
Query: 348 DPSNETAHGPVTVVNGVLFAGS---------VSAN----------GSTVYGGVPASYGCI 388
DPSN TA GPV++ NGV+FAGS V A G+TVYGGV GCI
Sbjct: 11 DPSNATAPGPVSLANGVIFAGSTIRKGPIYAVEAKTGKVLWSYQTGATVYGGVSVGNGCI 70
Query: 389 YLGNGYTVSLGKFHPTW 405
YLGNGY VS+G +P++
Sbjct: 71 YLGNGYMVSVGALNPSF 87
>gi|209515658|ref|ZP_03264522.1| PQQ-dependent dehydrogenase, methanol/ethanol family [Burkholderia
sp. H160]
gi|209503894|gb|EEA03886.1| PQQ-dependent dehydrogenase, methanol/ethanol family [Burkholderia
sp. H160]
Length = 575
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 70/318 (22%), Positives = 123/318 (38%), Gaps = 56/318 (17%)
Query: 20 INPVTVRNLRLRWSFYAGKDI----SATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQN 75
I+ V L+ WS+ D+ ATP V G ++ + +YA +A G +W+
Sbjct: 70 IDASNVAGLKQAWSYQFPADLKQGFEATPIVNGGYLFVSTPKDNVYAFDAKTGTQLWKYE 129
Query: 76 ---------------LSKLTGLSGTGIVVNVTVAVVVAVSRSNGELVWSTQI-DPRPRSQ 119
+++ L G + V + V A+ G LVW Q+ +P
Sbjct: 130 PKLGAESFKTACCDVVNRGVALYGKNVYVAMLSGEVAALDAQTGNLVWKKQMFEPGLGYA 189
Query: 120 ITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNGGKRG 179
+++ GA VG S E + RG +A L+ +G I+W+ Y +P N G +G
Sbjct: 190 FSLAPLALDGAIVVGTSGGEYGI--------RGYIAALNPDDGSILWKRYTIP-NAGDKG 240
Query: 180 G---------YSGAAVWGSSPAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDID 230
+ G A W + + P ++Y++S++AL+
Sbjct: 241 SETWPDGMQEHGGGAAWLTGTYDAATQTLYWGVGNPGPWLAALRPGDNLYSDSLLALNPK 300
Query: 231 SGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAV 290
+G + W D + D D P+L I+ G+ D ++
Sbjct: 301 NGDLKWHYQYTRNDTW------------------DYDGVNTPVLANINYKGKQYDAIIHA 342
Query: 291 QKSGFAWAFDRDSGDIIW 308
++GF A DR +G +I+
Sbjct: 343 DRNGFFHAIDRKTGKMIY 360
>gi|399078100|ref|ZP_10752700.1| PQQ-dependent dehydrogenase, methanol/ethanol family [Caulobacter
sp. AP07]
gi|398034038|gb|EJL27315.1| PQQ-dependent dehydrogenase, methanol/ethanol family [Caulobacter
sp. AP07]
Length = 729
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 80/350 (22%), Positives = 134/350 (38%), Gaps = 70/350 (20%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFY--AGKDISATPAVANGVVYFPSWNG 58
WL+HG + R++ IN V+ L L WS+ + ATP V +GV+Y S
Sbjct: 60 WLSHGRGYDEARHSPAS-QINTSNVKTLGLAWSYDLDTNRGQEATPLVVDGVIYTTSAWS 118
Query: 59 YLYAVNAFNGALIWE--QNLSKLTGLSGTGIVVNVTVAV-------------VVAVSRSN 103
+ A++ G L+W+ + T VVN VA ++A+
Sbjct: 119 KVQALDGLTGKLLWQFDPKVPGATAAKACCDVVNRGVAYWGGKVFVGALDGRLIALDAKT 178
Query: 104 GELVWS-TQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNG 162
G+ +WS +D IT + V G +G E + RG ++ D +G
Sbjct: 179 GQTLWSVVTVDQARNYTITGAPRVIKGRVIIGNGGAEFGV--------RGYVSAYDADSG 230
Query: 163 RIIWQTYMLPDNGGKRGGYS----------------------GAAVWGS---SPAIDVIR 197
+++W+ Y +P + K G S G VW S PA+D++
Sbjct: 231 KLVWRFYTVPGSDRKDGAASDPVMAMARKTWTGDWHDRGGGGGGTVWDSMAYDPALDLLY 290
Query: 198 RQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPD 257
N + T +++ SI+AL ++G W +
Sbjct: 291 LGVGNGSYWRRTARSPGGGDNLFIASILALRPETGEYVW------------------HYQ 332
Query: 258 CPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
PG D + +L + G+ R V++ K+GF + DR +G +I
Sbjct: 333 QTPGDQWDYTSTQHMILADLQIGGQPRKVLLQAPKNGFFYVLDRVTGKLI 382
>gi|75538429|sp|Q4W6G0.1|QGDA_PSEPU RecName: Full=Quinohemoprotein alcohol dehydrogenase ADH-IIG;
Short=ADH IIG; AltName: Full=Alcohol dehydrogenase
(azurin); Flags: Precursor
gi|66864085|dbj|BAD99293.1| quinohemoprotein alcohol dehydrogenase ADH-IIG [Pseudomonas putida]
Length = 718
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 81/350 (23%), Positives = 137/350 (39%), Gaps = 72/350 (20%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAGKD--ISATPAVANGVVYFPSWNG 58
W++ G + +RY+ + I+ V L L WS+ D + ATP V +G +Y
Sbjct: 51 WMSTGRTYDEQRYSPLK-QISDQNVGQLGLAWSYKLDLDRGVEATPIVVDGAMYTTGPFS 109
Query: 59 YLYAVNAFNGALIWEQNLSKLTGLSGTGI--VVNVTVAV-------------VVAVSRSN 103
+YA++A +G LIW+ + +G VN VAV + A+
Sbjct: 110 VVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAVWKGKVYVGVLDGRLEAIDAKT 169
Query: 104 GELVWS--TQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRN 161
G+ WS T+ D + IT + V G +G E + RG + D
Sbjct: 170 GQRAWSVDTRADHKRSYTITGAPRVVNGKVVIGNGGAEFGV--------RGYVTAYDAET 221
Query: 162 GRIIWQTYMLP---------------------DNGGKRGGYSGAAVWGS---SPAIDVIR 197
G+ W+ Y +P D ++GG G W S P ++++
Sbjct: 222 GKEAWRFYTVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGG--GGTAWDSFAYDPELNLLY 279
Query: 198 RQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPD 257
N P Q +++ +SIVA++ D+G W Y T
Sbjct: 280 IGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVW---------HYQTT------- 323
Query: 258 CPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
PG D + +L + +G+ R V++ K+GF + DR +G+++
Sbjct: 324 --PGDAWDYTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGELL 371
>gi|386286783|ref|ZP_10063968.1| alcohol dehydrogenase large subunit [gamma proteobacterium BDW918]
gi|385280211|gb|EIF44138.1| alcohol dehydrogenase large subunit [gamma proteobacterium BDW918]
Length = 714
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 79/348 (22%), Positives = 132/348 (37%), Gaps = 70/348 (20%)
Query: 1 WLNHGGDLNNRRYAYGEVL--INPVTVRNLRLRW--SFYAGKDISATPAVANGVVYFPSW 56
W HG D +RY+ VL IN + L L W + ATP V +GV+Y S
Sbjct: 51 WPMHGNDAYEQRYS---VLSDINTDNISKLGLAWYQDLPENRGQEATPIVIDGVIYTTSA 107
Query: 57 NGYLYAVNAFNGALIWEQN--LSKLTGLSGT-------------GIVVNVTVAVVVAVSR 101
+++A A G ++WE + + K TG+ G G+ + ++A+
Sbjct: 108 WNHVHAFLAETGEVLWEYDPKVPKSTGVKGCCDAVTRGLAYHDGGVYLATLDGRLIALDA 167
Query: 102 SNGELVWSTQ-IDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVR 160
G + WS +D IT + V G ++G E + RG + D+
Sbjct: 168 ETGSMRWSVNTVDSSLNYTITGAPRVANGKVFIGNGGAEYGV--------RGYITAYDIN 219
Query: 161 NGRIIWQTYMLPDNGGKRGG------------------YSGAAVWGS---SPAIDVIRRQ 199
+G ++W+ Y +P G G VW + P + +
Sbjct: 220 SGDLVWRFYTVPGTKSHETGTEPQALMDETWSKSNSPLEKGGTVWDTIVYDPDTNSLLFG 279
Query: 200 KQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCP 259
N P +++ +SIV+++ D+G+ W Y T
Sbjct: 280 VGNGSPWNPNIRSPGGGDNLFLSSIVSVNADTGKYKW---------HYQTT--------- 321
Query: 260 PGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
PG D + +L I+ +G R V + K+GF + DR +G +I
Sbjct: 322 PGEAWDFTATQPIVLANINIDGLDRKVAIQAPKNGFLYVLDRTNGKLI 369
>gi|388567560|ref|ZP_10153991.1| Pyrrolo-quinoline quinone [Hydrogenophaga sp. PBC]
gi|388265165|gb|EIK90724.1| Pyrrolo-quinoline quinone [Hydrogenophaga sp. PBC]
Length = 720
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 81/351 (23%), Positives = 138/351 (39%), Gaps = 73/351 (20%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSF--YAGKDISATPAVANGVVYFPSWNG 58
W +HG D R++ + L N V++L L WS+ + + + ATP V +G++Y +
Sbjct: 72 WPSHGLDYAETRHSKLDQL-NAGNVKDLGLVWSYNLESNRGVEATPLVVDGIMYVTASWS 130
Query: 59 YLYAVNAFNGALIW--EQNLSKLTGLSGTGIVVNVTVAV-------------VVAVSRSN 103
++A++ G IW + + + G G VVN VA+ ++A+ +
Sbjct: 131 IVHAIDVRTGKRIWTYDPQVPREGGFKGCCDVVNRGVALHEGQVFVASYDGRLIALDAAT 190
Query: 104 GELVWS--TQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRN 161
G+ W T ID + IT + V G +G E + RG + D +
Sbjct: 191 GQKRWEKDTIIDRKFSYTITGAPRVVKGKVIIGNGGAEYGV--------RGYVTAYDAKT 242
Query: 162 GRIIWQTYMLP-------------------DNGGK---RGGYSGAAVWGS---SPAIDVI 196
G W+ + +P D GK GG G W + P ++++
Sbjct: 243 GEQKWRWFTVPGDPSKPFEDESMAKAAKTWDPAGKWWEAGG--GGTAWDAMAFDPDLNLL 300
Query: 197 RRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNP 256
N ++Y SIVAL+ D+G+ W +
Sbjct: 301 YIGTGNGSPWAHKKRSPAGGDNLYLASIVALNPDTGKYVW------------------HY 342
Query: 257 DCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
PG N D + +L ++ +G+ R VV+ K+GF + DR +G I
Sbjct: 343 QETPGDNWDYTSTQPMILADLTLDGKKRKVVMHAPKNGFFFIIDRTNGKFI 393
>gi|27381331|ref|NP_772860.1| alcohol dehydrogenase [Bradyrhizobium japonicum USDA 110]
gi|27354498|dbj|BAC51485.1| bll6220 [Bradyrhizobium japonicum USDA 110]
Length = 575
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 74/309 (23%), Positives = 122/309 (39%), Gaps = 57/309 (18%)
Query: 20 INPVTVRNLRLRWSFYAG--KDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWE---- 73
IN V+ L W+F G + A P V NGV++ + G + A+NA G W
Sbjct: 64 INTSNVKGLTPVWTFATGVVEGHEAPPIVNNGVMFVATPMGQVIALNAKTGDEYWRYKRQ 123
Query: 74 --------QNLSKLTGLSGTGIVVNVTVAVVVAVSRSNGELVWSTQIDPRPRSQ-ITMSG 124
S+ GL + + T VVA+ G++VW T++ + Q +T+
Sbjct: 124 LPDDLFQLHPTSRGVGLWEDKLYLATTDDHVVALDAKTGKVVWDTKVQDYKKGQYMTLMP 183
Query: 125 SVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNG--------G 176
+ G VG S E + RG +A D ++G+ +W+TY +P G G
Sbjct: 184 LIVDGKVIVGGSGGEFGV--------RGYVAAYDAKDGKELWRTYTIPGEGEPGHDTWQG 235
Query: 177 KRGGYSGAAVWGSSPAIDVIRRQKQNNQTTKP----THPDQCISSDIYANSIVALDIDSG 232
G + W + + P THP ++Y +S++ALD ++G
Sbjct: 236 DDWKNGGGSAWMTGNYDKDTKTIYWGVGNAAPWPGETHP----GDNLYTSSVLALDPNNG 291
Query: 233 RIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQK 292
+I Y ++ + D D EAPML+ + +GR +V +
Sbjct: 292 KIK------TYHQYH------------QNDSWDWDEVEAPMLIDLQRDGRSIKSLVHPGR 333
Query: 293 SGFAWAFDR 301
W +R
Sbjct: 334 DAIFWVLER 342
>gi|319796353|ref|YP_004157993.1| pqq-dependent dehydrogenase [Variovorax paradoxus EPS]
gi|315598816|gb|ADU39882.1| PQQ-dependent dehydrogenase, methanol/ethanol family [Variovorax
paradoxus EPS]
Length = 702
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 75/349 (21%), Positives = 136/349 (38%), Gaps = 69/349 (19%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSF--YAGKDISATPAVANGVVYFPSWNG 58
W + G D R++ + +N V+ L L WS+ + + + ATP V +G++Y +
Sbjct: 55 WPSVGLDYAESRFSKLD-QVNAGNVKQLGLVWSYDLESTRGVEATPLVVDGIMYVTASWS 113
Query: 59 YLYAVNAFNGALIW--EQNLSKLTGLSGTGIVVNVTVAV-------------VVAVSRSN 103
++A++ G +W + + K G G VVN VA+ ++A+ +
Sbjct: 114 VVHAIDTRTGQKLWTFDPQVDKSKGFRGCCDVVNRGVALHEGRVYVAAYDGRLIALDAAT 173
Query: 104 GELVWSTQIDPRPRSQITMSGS--VYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRN 161
G+ VW + T++G+ V+ G +G E + RG + D +
Sbjct: 174 GQKVWEKNTIDGQKGSYTITGAPRVFKGKVIIGNGGAEYGV--------RGYVTAYDAKT 225
Query: 162 GRIIWQTYMLPDNGGK----------------RGGY----SGAAVWGS---SPAIDVIRR 198
G W+ +++P + K G Y G W S P ++++
Sbjct: 226 GDQKWRWFVVPGDPAKPFEDESMARAAKTWDPSGKYWEAGGGGTAWDSFAFDPELNLMYV 285
Query: 199 QKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDC 258
N ++Y S+VALD D+G+ W +
Sbjct: 286 GTGNGSPWAHKARSPKGGDNLYLGSVVALDPDTGKYVW------------------HYQE 327
Query: 259 PPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
PG N D ++ +L + G+ R V++ K+GF + DR +G I
Sbjct: 328 TPGDNWDYTSTQSMILANVKLGGKSRKVLLHAPKNGFFFVIDRTNGKFI 376
>gi|329895136|ref|ZP_08270840.1| Quino(hemo)protein alcohol dehydrogenase, PQQ-dependent [gamma
proteobacterium IMCC3088]
gi|328922493|gb|EGG29833.1| Quino(hemo)protein alcohol dehydrogenase, PQQ-dependent [gamma
proteobacterium IMCC3088]
Length = 725
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 85/352 (24%), Positives = 139/352 (39%), Gaps = 77/352 (21%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYA--GKDISATPAVANGVVYFPSWNG 58
WL++G D + +RY+ I+ + +L L W F + + ATP V +GV+Y
Sbjct: 69 WLSYGLDYDEQRYSR-LAQIDSDNITDLGLDWHFDTDYNRGLEATPLVVDGVMYVTGNWS 127
Query: 59 YLYAVNAFNGALIW--EQNLSKLTGLSGTGIVVNVTVAV-------------VVAVSRSN 103
+YA++A +G LIW + + K G VVN VA+ +VA+ S
Sbjct: 128 VVYALDASDGRLIWRYDPEVPKEWGKMACCDVVNRGVAIYQGKVFVGTLDARLVALEAST 187
Query: 104 GELVWSTQIDPRPRSQITMSGS--VYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRN 161
G ++W + + T++G+ G ++G E RG ++ D +
Sbjct: 188 GRVLWDIKTADTSKYPYTITGAPRAAKGKVFIGNGGAEFGA--------RGFVSAYDADS 239
Query: 162 GRIIWQTYMLPDN---GGKRGGYSGAA---------------VWGS--------SPAIDV 195
G ++W+ Y +P N G + AA VW S I V
Sbjct: 240 GELVWRFYTVPGNPEVGQESEALEQAALTWTGEWWNAGGGGTVWDSIVYDTDLDQLYIGV 299
Query: 196 IRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNN 255
N + P D +++ +SIVALD D+G W F T
Sbjct: 300 GNGSPWNRRVRSPQGGD-----NLFLSSIVALDPDTGAYIWH--------FQET------ 340
Query: 256 PDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
P D + ML ++ G R V+ K+GF + DR++G ++
Sbjct: 341 ----PAETWDYTATQPIMLAEMNWQGTARRVIWHAPKNGFFFIIDRETGQLL 388
>gi|260590574|dbj|BAI44330.1| alcohol dehydrogenase subunit I [Acetobacter pasteurianus]
Length = 742
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 77/353 (21%), Positives = 130/353 (36%), Gaps = 68/353 (19%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFY--AGKDISATPAVANGVVYFPSWNG 58
WL++G + +RY+ + IN V +L+L W + + ATP V G++Y +
Sbjct: 55 WLSYGRTYSEQRYSPLD-QINRSNVGDLKLAWYYTLDTNRGQEATPLVVGGIMYATTNWS 113
Query: 59 YLYAVNAFNGALIWEQNLSKLTGLSGTGIVVNVTVAV---------------VVAVSRSN 103
+ A++A G L+W+ + ++ G V +VA
Sbjct: 114 KMEALDAATGKLLWQYDPKVPGNIADKGCCDTVNRGAGYWNGKVFWGTFDGRLVAADAKT 173
Query: 104 GELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTF--RGSLAKLDVRN 161
G+ VW P S GA V + L + F RG ++ D
Sbjct: 174 GKKVWEVNTIPADASLGKQRSYTVDGAVRVAKGLV---LIGNGGAEFGARGFVSAFDAET 230
Query: 162 GRIIWQTYMLPDNG--------------------GKRGGY----SGAAVWGS---SPAID 194
G++ W+ Y +P+N G +G + G VW S P D
Sbjct: 231 GKLKWRFYTVPNNKNEPDHAASDNILMNKAYKTWGPKGAWVRQGGGGTVWDSLVYDPVSD 290
Query: 195 VIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPN 254
+I N + + I S+++ SIVAL ++G W D + +T +
Sbjct: 291 LIYLAVGNGSPWNYKYRSEGIGSNLFLGSIVALKPETGEYVWHFQATPMDQWDYTSV--- 347
Query: 255 NPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
+ M L + NG R V+V K+GF + D +G+ +
Sbjct: 348 ---------------QQIMTLDMPVNGEMRHVIVHAPKNGFFYVLDAKTGEFL 385
>gi|167589555|ref|ZP_02381943.1| Pyrrolo-quinoline quinone [Burkholderia ubonensis Bu]
Length = 573
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 76/336 (22%), Positives = 130/336 (38%), Gaps = 55/336 (16%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAGKDI----SATPAVANGVVYFPSW 56
WL + N R ++ I+P ++L+ W++ D+ ATP V ++ +
Sbjct: 52 WLTYYRTYNGRSHS-PLTQIDPSNAKDLKQVWAYKFPADLKQGFEATPIVNGNYLFVTTP 110
Query: 57 NGYLYAVNAFNGALIW--EQNLSKLTGLSGTGIVVNVTVAV-------------VVAVSR 101
+YA +A G +W E LS + + VVN VA+ V A+
Sbjct: 111 KDNVYAFDAKTGRQLWKYEPKLSPSSFKTACCDVVNRGVALYGKNVYVAMLGGEVAALDA 170
Query: 102 SNGELVWSTQI-DPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVR 160
G LVW ++ DP +++ GA VG S E + RG + L+
Sbjct: 171 QTGNLVWKKRLFDPGLGYSFSLAPLALDGAIVVGTSGGEYGI--------RGYIMALNPD 222
Query: 161 NGRIIWQTYMLPDNGGK--------RGGYSGAAVWGSSPAIDVIRRQKQNNQTTKPTHPD 212
+G +W+ Y +P +G K + G A W + R P
Sbjct: 223 DGSEVWKRYTIPASGEKGAETWPDGMQSHGGGAAWLTGTYDAASRTLYWGVGNPGPWLAA 282
Query: 213 QCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAP 272
++Y++S++ALD +G + W D + D D A
Sbjct: 283 LRPGDNLYSDSLLALDAKNGNLKWHYQYTNNDTW------------------DYDGVNAA 324
Query: 273 MLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDIIW 308
+L I+ G+ D ++ ++GF A DR +G +I+
Sbjct: 325 VLADITYKGKDYDAIIHADRNGFFHAIDRTTGKLIY 360
>gi|331694610|ref|YP_004330849.1| PQQ-dependent dehydrogenase [Pseudonocardia dioxanivorans CB1190]
gi|326949299|gb|AEA22996.1| PQQ-dependent dehydrogenase, methanol/ethanol family
[Pseudonocardia dioxanivorans CB1190]
Length = 562
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 78/345 (22%), Positives = 132/345 (38%), Gaps = 72/345 (20%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAGKD----------ISATPAVANGV 50
WL + G N +R++ + IN V+ + W F AG A P V +GV
Sbjct: 46 WLTYYGAYNGQRFSPLD-QINTENVKRIGPAWVFQAGSSGMIAGASTYAFEAAPLVVDGV 104
Query: 51 VYFPSWNGYLYAVNAFNGALIWEQNLSKLTGLSGTGIVVNVTVAV-------------VV 97
++ W+G+++A+NA G IW + +S VN VAV ++
Sbjct: 105 MFVSGWDGWVWALNAATGNEIWRYKHATPYDVSLCCGNVNRGVAVAKGKVFSVTPNAHLI 164
Query: 98 AVSRSNGELVWS-TQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAK 156
A+ + G+ +W T D R T + + VG S E + RG L
Sbjct: 165 ALDATTGKKLWDRTYGDVRAGESATCAPLIVKNLVIVGSSGGEFGV--------RGHLDA 216
Query: 157 LDVRNGRIIWQTYMLPDNG----------GKRGGYSGAAVWGS---SPAIDVIRRQKQNN 203
D+ +G W+ YM+P G G+ G W + P +++ N
Sbjct: 217 FDLDSGEHAWRCYMVPKPGEPGSDTWPSEGQAWARGGGNCWLTGTFDPETNLLYWGTGN- 275
Query: 204 QTTKPTHPDQCISSD-IYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGP 262
P + D +Y +SIVA+D D+G I W +D++
Sbjct: 276 --PAPDFDGEVREGDNLYTDSIVAIDADAGEIRWHYQCTPHDVW---------------- 317
Query: 263 NLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
D+ + G R ++ K+G+ + DR +G+++
Sbjct: 318 ----DYDSISECILFEHEG--RKLLGHFDKNGYFFVVDRTNGELV 356
>gi|436833938|ref|YP_007319154.1| PQQ-dependent enzyme-like protein [Fibrella aestuarina BUZ 2]
gi|384065351|emb|CCG98561.1| PQQ-dependent enzyme-like protein [Fibrella aestuarina BUZ 2]
Length = 708
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 77/333 (23%), Positives = 121/333 (36%), Gaps = 71/333 (21%)
Query: 20 INPVTVRNLRLRWSFYA--GKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLS 77
I P V+NLR+ W++ A + P + +GV+Y + +A++A G +W +
Sbjct: 51 ITPDNVQNLRVAWTYDAPDAGQMQCNPIIVDGVLYGVTAAVQAFALDAATGRELWRFDGE 110
Query: 78 KLTGLSGTG------------------------IVVNVTVAVVVAVSRSNGELVWSTQID 113
KL T ++ V NG L +
Sbjct: 111 KLNAWHSTSRGVSYWQSADGNDRRILYTMGSHIYALDARTGKTVPTFGDNGRLDLHIGLG 170
Query: 114 PRPRSQITMS---GSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYM 170
+ + +S G++Y + + EEA A G + DV+ GR+ W
Sbjct: 171 DTNKDKFIISNTPGAIYQNLIIMPVRVSEEAGAAP------GYVRAFDVQTGRLAWTFRT 224
Query: 171 LPDNGGKRGGYS-------------GAAVWGSSPAIDVIRRQK--QNNQTTKPTHPDQCI 215
+P G GY GA W A+D R + +
Sbjct: 225 IPHPG--EAGYETWPKDAYKNPDIGGANCWAGM-AVDSKRGIVFVPTGSASYDFYGGNRK 281
Query: 216 SSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLL 275
++YAN ++ALD +SG+ W +DI+ D D P LL
Sbjct: 282 GQNLYANCLLALDANSGKRLWHFQFFHHDIW------------------DRDLPAPPTLL 323
Query: 276 TISTNGRFRDVVVAVQKSGFAWAFDRDSGDIIW 308
TI NG+ DVV KSG+ + FDR +G I+
Sbjct: 324 TIQQNGKPVDVVAQTTKSGYVYVFDRTTGRPIF 356
>gi|121607426|ref|YP_995233.1| Pyrrolo-quinoline quinone [Verminephrobacter eiseniae EF01-2]
gi|121552066|gb|ABM56215.1| Pyrrolo-quinoline quinone [Verminephrobacter eiseniae EF01-2]
Length = 706
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 71/330 (21%), Positives = 128/330 (38%), Gaps = 68/330 (20%)
Query: 20 INPVTVRNLRLRWSF--YAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIW--EQN 75
+N V+ L L WS+ + + + ATP V +G++Y + ++A++ G +W +
Sbjct: 78 VNADNVKQLGLVWSYNLESTRGVEATPLVVDGIMYVTASWSVVHAIDTRTGDKLWTFDPQ 137
Query: 76 LSKLTGLSGTGIVVNVTVAV-------------VVAVSRSNGELVWSTQIDPRPRSQITM 122
+ K G G VVN VA+ ++A+ + G+ VW T+
Sbjct: 138 VDKSKGYKGCCDVVNRGVALYQGKVYVAAYDGRLIALDAATGQKVWEKNTIEGQNGSYTI 197
Query: 123 SGS--VYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNGGK--- 177
+G+ V+ G +G E + RG ++ D + G W+ + +P + GK
Sbjct: 198 TGAPRVFKGKVIIGNGGAEYGV--------RGYVSAYDAKTGEQKWRWFAVPGDPGKPFE 249
Query: 178 -------------RGGY----SGAAVWGS---SPAIDVIRRQKQNNQTTKPTHPDQCISS 217
G Y G W S P ++++ N
Sbjct: 250 DESMARAAKTWDPSGKYWEAGGGGTAWDSFAFDPELNLMYVGTGNGSPWAHKARSPNGGD 309
Query: 218 DIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTI 277
++Y S+VAL+ D+G+ W + PG N D ++ +L +
Sbjct: 310 NLYLGSVVALNPDTGKYVW------------------HYQETPGDNWDYTSTQSMILADV 351
Query: 278 STNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
G+ R V++ K+GF + DR +G I
Sbjct: 352 KIGGKVRKVLLHAPKNGFFFVIDRSNGKFI 381
>gi|402824018|ref|ZP_10873409.1| quinohemoprotein alcohol dehydrogenase [Sphingomonas sp. LH128]
gi|402262452|gb|EJU12424.1| quinohemoprotein alcohol dehydrogenase [Sphingomonas sp. LH128]
Length = 708
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 81/349 (23%), Positives = 136/349 (38%), Gaps = 74/349 (21%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAGKDI----SATPAVANGVVYFPSW 56
WL+HG + R++ I+ V L L W YA D TP V +GV+Y +
Sbjct: 51 WLSHGRTYDETRFS-PLAQIDGVNAGKLGLAW--YADLDTFRGQEGTPLVVDGVMYATTA 107
Query: 57 NGYLYAVNAFNGALIWE--QNLSKLTGLSGTGIVVNVTVAV-------------VVAVSR 101
+ A++A G +WE + T + VVN A ++A+
Sbjct: 108 WSKVVALDAETGRQLWEFDPKVPGTTAIHACCDVVNRGAAYSDGRLFFGTVDGRLIALDA 167
Query: 102 SNGELVWSTQI-DPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVR 160
G +W Q DP+ I+ + V G ++G ++ + RG ++ D +
Sbjct: 168 KTGRQLWRVQTTDPKKPMAISGAPRVARGKVFIGFGGADQGM--------RGYISAYDEK 219
Query: 161 NGRIIWQTYMLPDNGGKRGGYSG------------AAVW----GSSPAIDVIRRQKQNNQ 204
GR+ W+ Y +P G++ G + A W G A D I ++ N+
Sbjct: 220 TGRLAWRFYTVPGKPGEKDGTASDDALERLALPTWAGDWWKIGGGGTAWDSIVYDEKMNR 279
Query: 205 TTKPTHP----DQCISS-----DIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNN 255
++ I S +++ SI+ALD D+GR W +
Sbjct: 280 LYVGVGNGGPWNRGIRSAGKGDNLFIGSILALDPDTGRYLW------------------H 321
Query: 256 PDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSG 304
PG D + L ++ GR R V++ K+GF + DR++G
Sbjct: 322 YQETPGDQWDFTSTQQMTLADLTIGGRARKVILHAPKNGFFYVIDRETG 370
>gi|429330116|ref|ZP_19210921.1| putative quinoprotein ethanol dehydrogenase [Pseudomonas putida
CSV86]
gi|428765207|gb|EKX87320.1| putative quinoprotein ethanol dehydrogenase [Pseudomonas putida
CSV86]
Length = 705
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 82/350 (23%), Positives = 136/350 (38%), Gaps = 72/350 (20%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAGKD--ISATPAVANGVVYFPSWNG 58
W++HG + +RY+ + +N V L + W+ D ATP V +GV+Y
Sbjct: 47 WMSHGRTYDEQRYSPLDA-VNDSNVGQLGMAWTTRLDIDSGTEATPIVVDGVMYTTGAFS 105
Query: 59 YLYAVNAFNGALIWE-------QNLSK-LTGLSGTGIVV-NVTVAV------VVAVSRSN 103
+YA+NA G ++W+ NLS+ G G+ V N V V ++A+ +
Sbjct: 106 IVYAMNAATGEMLWKYDPHVPPANLSQGCCGPVNRGVAVWNGKVYVGSFDGRLIALDAAT 165
Query: 104 GELVWS--TQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRN 161
G+ WS T ID IT + + G +G E + RG + D
Sbjct: 166 GKEAWSVDTIIDRSKSYSITGAPRIVKGKVLIGNGGAEFGV--------RGYVTAYDAET 217
Query: 162 GRIIWQTYMLP---------------------DNGGKRGGYSGAAVWGS---SPAIDVIR 197
G+ W+ Y +P D K GG G W S P +D++
Sbjct: 218 GKQAWRFYTVPGDPKLPPENPAMAMAMKTWTGDGWVKWGG--GGTAWDSMAYDPELDLLY 275
Query: 198 RQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPD 257
N Q +++ +SI+AL D+G W + D + +T
Sbjct: 276 IGTGNGSPWNYQFRSQGKGDNLFVSSILALRPDTGEYVWHYQVTPQDRWDYTAT------ 329
Query: 258 CPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
+ +L I +G+ R V++ K+GF + DR +G ++
Sbjct: 330 ------------QHMILADIKIDGQVRKVLMQAPKNGFFYVLDRTNGKLL 367
>gi|323529269|ref|YP_004231421.1| PQQ-dependent dehydrogenase [Burkholderia sp. CCGE1001]
gi|323386271|gb|ADX58361.1| PQQ-dependent dehydrogenase, methanol/ethanol family [Burkholderia
sp. CCGE1001]
Length = 575
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/319 (21%), Positives = 122/319 (38%), Gaps = 54/319 (16%)
Query: 20 INPVTVRNLRLRWSFYAGKDI----SATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQN 75
I+ V+ L+ WS+ D+ ATP V ++ + +YA +A +G +W+
Sbjct: 70 IDTSNVKQLKQVWSYKFPADLQQGFEATPIVNGRYLFVTTPKDNVYAFDAASGKQLWKFE 129
Query: 76 ---------------LSKLTGLSGTGIVVNVTVAVVVAVSRSNGELVW-STQIDPRPRSQ 119
+++ L G + V + VVA+ G L W T +P
Sbjct: 130 PKLGAESFKTACCDVINRGVALYGKNVYVAMLNGEVVALDAQTGSLAWRKTMFEPGLGYA 189
Query: 120 ITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNGGKRG 179
+++ GA VG + E RG +A L+ NG ++W+ + +P G K G
Sbjct: 190 FSLAPLALDGALVVGSAGGEYGA--------RGFIAALNPDNGNVLWKRFTVPAAGEKGG 241
Query: 180 G--------YSGAAVWGSSPAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDS 231
+ GA W + + P D ++Y++S++ALD +
Sbjct: 242 NTWPDGMQEHGGAPAWLTGTYDAASKTLYWGVGNPGPWLADLRPGDNLYSDSLLALDPKT 301
Query: 232 GRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQ 291
G + W +D + D D P+L I + D ++
Sbjct: 302 GDLKWHYQYTKHDTW------------------DYDGVNTPVLANIKYQDKEYDAIIHAD 343
Query: 292 KSGFAWAFDRDSGDIIWFK 310
++G+ A DR +G +I+ K
Sbjct: 344 RNGYFHAIDRGTGKLIYAK 362
>gi|390958676|ref|YP_006422433.1| glucose dehydrogenase [Terriglobus roseus DSM 18391]
gi|390413594|gb|AFL89098.1| glucose dehydrogenase [Terriglobus roseus DSM 18391]
Length = 726
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 83/351 (23%), Positives = 143/351 (40%), Gaps = 72/351 (20%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAG--KDISATPAVANGVVYFPSWNG 58
W +GG + +Y+ + IN V++LR WS G + + P V +Y + +
Sbjct: 37 WSAYGGAEDGSQYSALK-QINRANVKSLRQVWSVPTGDARLYAFNPLVIGETMYVLAQDY 95
Query: 59 YLYAVNAFNGALIWEQNLSKLTGL----------SGTGIVVNVTVAV---VVAVSRSNGE 105
+ A++A GA IW L T L S G + +AV + + + G+
Sbjct: 96 SVVALHAATGAQIWAHPLKPKTPLVTNRGLSYWQSADGKDRRLILAVDNHLEEIDAATGK 155
Query: 106 LVWSTQIDP---------RPRSQITM-----SGSVYMGAFYVGLSSLEEALPADQCCTFR 151
+ S D R ++T+ G V+ G ++ EE +
Sbjct: 156 SITSFGKDGLVDLREGLGRDVQRLTLVQSYNPGRVFHDVIIFGSATNEE------YDSGP 209
Query: 152 GSLAKLDVRNGRIIWQTYMLPDNGGKRGGYS-----------GAAVWGSSPAIDVIRRQK 200
G + D+R GR W + +P G GY GA W S A+D +R
Sbjct: 210 GDIRAFDIRTGRPAWTFHTIPHPG--EFGYDTWPKDAWKTVGGANAW-SGMALDE-KRGI 265
Query: 201 QNNQTTKPTHP---DQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPD 257
T P + ++++ +S++ALD ++G++ W + +DI+ + +NP+
Sbjct: 266 VYVPTASPKYNFYGGNRAGNNLFGDSLLALDANTGKLLWHFQMVHHDIWDY-----DNPN 320
Query: 258 CPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDIIW 308
P ML T+ NG+ D+V K+G+ W FDR +G +W
Sbjct: 321 TP-------------MLATVKHNGKLVDIVAQTSKTGYLWVFDRVTGKPLW 358
>gi|375108084|ref|ZP_09754345.1| PQQ-dependent dehydrogenase, methanol/ethanol family
[Burkholderiales bacterium JOSHI_001]
gi|374668815|gb|EHR73600.1| PQQ-dependent dehydrogenase, methanol/ethanol family
[Burkholderiales bacterium JOSHI_001]
Length = 582
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/308 (22%), Positives = 118/308 (38%), Gaps = 54/308 (17%)
Query: 25 VRNLRLRWSFYAGK--DISATPAVANGVVYFPSWNGYLYAVNAFNGALIWE------QNL 76
V L+L W+F G+ + P V G +Y + + A++A GA +W L
Sbjct: 74 VAKLQLAWAFTTGQVEGHQSPPIVNGGYMYITTPGSQIVALDAKTGAELWRYKKQLPPEL 133
Query: 77 SKL------TGLSGTGIVVNVTVAVVVAVSRSNGELVWSTQIDP-RPRSQITMSGSVYMG 129
+L L G + V+VA+ G+++W T ++ + +T++ G
Sbjct: 134 MQLHPTNRGVALYGDKLYFATLDCVLVALDAKTGKVLWETPVENWKSGYYMTLAPLAAKG 193
Query: 130 AFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYMLP-----------DNGGKR 178
VG S E + RG +A D G+ W+T+ +P DNG +
Sbjct: 194 KIMVGSSGGELGV--------RGFVAAFDAETGKQAWRTFTVPAPTEPGGDTWPDNGSYK 245
Query: 179 GGYSGAAVWGSSPAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAK 238
G G +VW + P PD ++Y +S V+ ++D+G+I
Sbjct: 246 TG--GGSVWITGTYDSATNLAYWGTGNPAPWTPDTRKGDNLYTSSTVSFNVDTGQIT--- 300
Query: 239 PLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWA 298
G+ + + + D D P+L GR V ++G+ W
Sbjct: 301 ---GHHQYTWND------------SWDWDEVTPPLLFDTEYKGRKIKAAVHAGRNGYLWM 345
Query: 299 FDRDSGDI 306
+RD G +
Sbjct: 346 LERDGGKL 353
>gi|398808609|ref|ZP_10567471.1| PQQ-dependent dehydrogenase, methanol/ethanol family [Variovorax
sp. CF313]
gi|398087314|gb|EJL77906.1| PQQ-dependent dehydrogenase, methanol/ethanol family [Variovorax
sp. CF313]
Length = 704
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 74/349 (21%), Positives = 137/349 (39%), Gaps = 69/349 (19%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSF--YAGKDISATPAVANGVVYFPSWNG 58
W + G D + R++ + +N V+ L L WS+ + + + ATP V +G++Y +
Sbjct: 57 WPSVGLDYSESRFSRLD-QVNAGNVKQLGLVWSYNLESTRGVEATPLVVDGIMYITASWS 115
Query: 59 YLYAVNAFNGALIW--EQNLSKLTGLSGTGIVVNVTVAV-------------VVAVSRSN 103
++A++ G +W + + K G G VVN VA+ ++A+ +
Sbjct: 116 VVHAIDTRTGQKLWTFDPQVDKSKGFRGCCDVVNRGVAIHEGKVYVAAYDGRLIALDAAT 175
Query: 104 GELVWSTQIDPRPRSQITMSGS--VYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRN 161
G+ VW + T++G+ V+ G +G E + RG + D +
Sbjct: 176 GQKVWEKNTIEGQKGSYTITGAPRVFKGKVIIGNGGAEYGV--------RGYVTAYDAKT 227
Query: 162 GRIIWQTYMLPDNGGK----------------RGGY----SGAAVWGS---SPAIDVIRR 198
G W+ +++P + K G Y G W S P ++++
Sbjct: 228 GDQKWRWFVVPGDPAKPFEDESMARAAKTWDPSGKYWEAGGGGTAWDSFAFDPELNLMYV 287
Query: 199 QKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDC 258
N ++Y S+VAL+ D+G+ W +
Sbjct: 288 GTGNGSPWSHKARSPKGGDNLYLGSVVALNPDTGKYVW------------------HYQE 329
Query: 259 PPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
PG N D ++ +L + G+ R V++ K+GF + DR +G I
Sbjct: 330 TPGDNWDYTSTQSMILADMKLGGKPRKVLLHAPKNGFFFVIDRTNGKFI 378
>gi|365900074|ref|ZP_09437949.1| putative dehydrogenase xoxF precursor [Bradyrhizobium sp. STM 3843]
gi|365418885|emb|CCE10491.1| putative dehydrogenase xoxF precursor [Bradyrhizobium sp. STM 3843]
Length = 626
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 86/359 (23%), Positives = 139/359 (38%), Gaps = 82/359 (22%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAGKD--ISATPAVANGVVYF--PSW 56
W D N R++ + IN L+L W+F G D A P + +G +Y P
Sbjct: 50 WPMPARDYANTRFSDLD-QINISNASQLQLAWTFSVGADRGQEAAPIIVDGTMYVVGPYA 108
Query: 57 NGY---LYAVNAFNGALIWEQNLSKLTGLSGTGI--VVNVTVAV-------------VVA 98
Y ++A++A +G L W +G VVN +A VA
Sbjct: 109 GPYPNRVFALDATSGELKWSYAPKPEPAAAGVACCDVVNRGLAFDSGKVFLNTLDDHTVA 168
Query: 99 VSRSNGELVWSTQIDPRPRSQ-ITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKL 157
+ G+ +W T++ R + ITM+ V G VG S E + RG + L
Sbjct: 169 IDAKTGKELWHTKLGEINRGETITMAPVVAKGKVLVGNSGGELGV--------RGWVTAL 220
Query: 158 DVRNGRIIWQTYML-PDNG---------------GKRGGYS----------GAAVWG--- 188
D G + W+ Y PD GK G G +WG
Sbjct: 221 DENTGAVAWRAYATGPDKDVLIGDDFKPFYASLKGKDLGVKTWPADRWQNGGGTMWGWIS 280
Query: 189 SSPAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYF 248
PA+++I N P + +Q ++++ +I A DID+G WA + +D+F
Sbjct: 281 YDPALNMIYYGTAN---PSPWNANQRSGDNLWSTTIFARDIDTGHAKWAYQVNPHDLF-- 335
Query: 249 TCLVPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
D D +L+ + NG R V++ ++G+ + DR SG+++
Sbjct: 336 ----------------DHDEINENVLVDLDINGAPRKVLIHPGRNGYMYVIDRTSGEVL 378
>gi|336252260|ref|YP_004595367.1| alcohol dehydrogenase (acceptor) [Halopiger xanaduensis SH-6]
gi|335336249|gb|AEH35488.1| Alcohol dehydrogenase (acceptor) [Halopiger xanaduensis SH-6]
Length = 569
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 73/329 (22%), Positives = 127/329 (38%), Gaps = 50/329 (15%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRW--SFYAGKDISATPAVANG---VVYFPS 55
WL +GG+ +R +V I P V L L + S G + TP V G V+Y +
Sbjct: 63 WLMYGGNYEQQRVTTADV-ITPDNVSELDLEYEMSVGTGSSMEGTPIVVPGDPPVMYQTN 121
Query: 56 WNGYLYAVNAFNGALIWEQNLSKLTGLS-------------GTGIVVNVTVAVVVAVSRS 102
++ A++ G ++W + G+ G + + + V+A++R
Sbjct: 122 GPNHIKAIDPREGEVLWSYTYAPPIGVELCCDDNNRGAAVYGDKVYMTTLDSGVIALNRY 181
Query: 103 NGELVWSTQI-DPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRN 161
GE W TQ D + T + V+ G Y G + E + G +A LD +
Sbjct: 182 TGEEEWYTQTADHQSGYSATWAPVVHDGTIYTGSAGGEYGV--------LGFIAALDAES 233
Query: 162 GRIIWQTYMLPDNG--GKRGGYSGAAVWGSSPAIDVIRRQKQNNQTTKPTHPDQCISS-- 217
G ++WQT LP++ G + W +P ID R + D +
Sbjct: 234 GDMVWQTDTLPEDEWVGMSREHGCGTSW-MTPTIDEERGVLYSPVANPGPDFDGTVRPGP 292
Query: 218 DIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTI 277
+ + L+++ G W +D++ + P +L +
Sbjct: 293 NFPTCGTITLNLEDGSREWGFQSSPHDVWDYDAAAPRV-----------------LLRDV 335
Query: 278 STNGRFRDVVVAVQKSGFAWAFDRDSGDI 306
NG D+VV+ K+G+ + D DSG +
Sbjct: 336 EANGESMDMVVSSDKAGWVYTLDADSGQL 364
>gi|407710110|ref|YP_006793974.1| alcohol dehydrogenase [Burkholderia phenoliruptrix BR3459a]
gi|407238793|gb|AFT88991.1| alcohol dehydrogenase [Burkholderia phenoliruptrix BR3459a]
Length = 575
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 68/319 (21%), Positives = 122/319 (38%), Gaps = 54/319 (16%)
Query: 20 INPVTVRNLRLRWSFYAGKDI----SATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQN 75
I+ V+ L+ WS+ D+ ATP V ++ + +YA +A +G +W+
Sbjct: 70 IDTSNVKQLKQVWSYKFPADLQQGFEATPIVNGRYLFVTTPKDNVYAFDAASGKQLWKFE 129
Query: 76 ---------------LSKLTGLSGTGIVVNVTVAVVVAVSRSNGELVW-STQIDPRPRSQ 119
+++ L G + V + VVA+ G L W T +P
Sbjct: 130 PKLGAESFKTACCDVINRGVALYGKNVYVAMLNGEVVALDAQTGSLAWRKTMFEPGLGYA 189
Query: 120 ITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNGGKRG 179
+++ GA VG + E RG +A L+ NG ++W+ + +P G K G
Sbjct: 190 FSLAPLALDGALVVGSAGGEYGA--------RGFIAALNPDNGNVLWKRFTVPAAGEKGG 241
Query: 180 G--------YSGAAVWGSSPAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDS 231
+ GA W + + P D ++Y++S++ALD +
Sbjct: 242 NTWPDGMQEHGGAPAWLTGTYDAASKTLYWGVGNPGPWLADLRPGDNLYSDSLLALDPKT 301
Query: 232 GRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQ 291
G + W +D + D D P+L I + D ++
Sbjct: 302 GDLKWHYQYTKHDTW------------------DYDGVNTPVLANIKYQDKDYDAIIHAD 343
Query: 292 KSGFAWAFDRDSGDIIWFK 310
++G+ A DR +G +I+ K
Sbjct: 344 RNGYFHAIDRGTGKLIYAK 362
>gi|444361079|ref|ZP_21162229.1| putative quinoprotein decanol dehydrogenase [Burkholderia
cenocepacia BC7]
gi|444372446|ref|ZP_21171917.1| putative quinoprotein decanol dehydrogenase [Burkholderia
cenocepacia K56-2Valvano]
gi|443593575|gb|ELT62303.1| putative quinoprotein decanol dehydrogenase [Burkholderia
cenocepacia K56-2Valvano]
gi|443598636|gb|ELT66971.1| putative quinoprotein decanol dehydrogenase [Burkholderia
cenocepacia BC7]
Length = 573
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 73/317 (23%), Positives = 120/317 (37%), Gaps = 54/317 (17%)
Query: 20 INPVTVRNLRLRWSFYAGKDI----SATPAVANGVVYFPSWNGYLYAVNAFNGALIW--E 73
I+ +NL+ W++ D+ ATP V ++ + +YA +A G +W E
Sbjct: 70 IDASNAKNLKQVWAYKFPADLKQGFEATPIVNGNYLFVTTPKDNVYAFDAKTGKQLWKYE 129
Query: 74 QNLSKLTGLSGTGIVVNVTVAV-------------VVAVSRSNGELVWSTQI-DPRPRSQ 119
L + + VVN VA+ V A+ G LVW Q+ +P
Sbjct: 130 PKLGAASFKTACCDVVNRGVALYGKNVYIAMLNGEVAALDAQTGNLVWKKQMFEPGLGYA 189
Query: 120 ITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNGGK-- 177
+++ GA VG S E + RG +A L+ +G +W+ Y +P G K
Sbjct: 190 FSLAPLAIDGAIVVGTSGGEYGI--------RGYIAALNPEDGSQVWKRYTIPAAGEKGA 241
Query: 178 ------RGGYSGAAVWGSSPAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDS 231
+ G A W + R P ++Y++S++ALD S
Sbjct: 242 ETWPDGMQSHGGGAAWLTGTYDAASRTLYWGVGNPGPWLAALRPGDNLYSDSLLALDAKS 301
Query: 232 GRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQ 291
G + W D + D D A +L I G+ D ++
Sbjct: 302 GNLKWHYQYTNNDTW------------------DYDGVNAAVLADIKYKGKDYDAIIHAD 343
Query: 292 KSGFAWAFDRDSGDIIW 308
++GF A DR +G +I+
Sbjct: 344 RNGFFHAIDRTTGKLIY 360
>gi|357975708|ref|ZP_09139679.1| alcohol dehydrogenase large subunit [Sphingomonas sp. KC8]
Length = 716
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 85/355 (23%), Positives = 143/355 (40%), Gaps = 72/355 (20%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAGKD--ISATPAVANGVVYFPSWNG 58
W+++G + ++ + IN V L L WS+ D ATP + +GV+Y S
Sbjct: 51 WMSNGRGYDEDHFSPLD-QINAENVGKLSLAWSYDLDTDRGQEATPIIVDGVMYTSSAWS 109
Query: 59 YLYAVNAFNGALIW--EQNLSKLTGLSGTGIVVNVTVAV-------------VVAVSRSN 103
+YA++A G L+W + ++ G VVN VAV ++A+ +
Sbjct: 110 KVYALDAATGKLLWSYDPEVAGKKAYDGCCDVVNRGVAVWHGKVYVGAFDGRLIALDAAT 169
Query: 104 GELVWSTQ-IDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNG 162
G+ VWS +DP+ IT + V G +G E + RG + D G
Sbjct: 170 GKPVWSVMTVDPKKPYTITGAPRVVKGKVLIGNGGAELGV--------RGYVTAYDAETG 221
Query: 163 RIIWQTYMLPDNGGKRGGYSGAAV--------WGSSPA----------IDVIRRQKQNNQ 204
+ W+ Y P+ GK G + + WG + A D I + +Q
Sbjct: 222 ALAWRFYTAPNPDGKADGAASDPIFAKVADKTWGPNGAWKQIGGGGTVWDAIVYDQDLDQ 281
Query: 205 ----TTKPTHPDQCISS-----DIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNN 255
T + ++ I S +++ +SIVALD ++G W +
Sbjct: 282 ILIGTGNGSPWNRRIRSGDKGDNLFLSSIVALDPETGAYRW------------------H 323
Query: 256 PDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDIIWFK 310
PG + D + +L I+ +G R V++ K+G+ + DR +G I K
Sbjct: 324 YQETPGESWDFTATQPIILADIAIDGSPRKVLLHAPKNGYFYVIDRKTGTPISVK 378
>gi|148256784|ref|YP_001241369.1| alcohol dehydrogenase [Bradyrhizobium sp. BTAi1]
gi|146408957|gb|ABQ37463.1| putative alcohol dehydrogenase [Bradyrhizobium sp. BTAi1]
Length = 712
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 78/349 (22%), Positives = 133/349 (38%), Gaps = 69/349 (19%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFY--AGKDISATPAVANGVVYFPSWNG 58
W G D R++ + IN V++L L WS+ + + + ATP V +G++Y +
Sbjct: 65 WPTIGLDYAETRFSRLD-KINTDNVKDLGLAWSYNLDSERGVEATPVVVDGIMYQTASWS 123
Query: 59 YLYAVNAFNGALIW--EQNLSKLTGLSGTGIVVNVTVAV-------------VVAVSRSN 103
++A++A G IW + + + G G VVN VAV ++A+ +
Sbjct: 124 VVHAIDARTGKKIWTFDPGVKRELGYKGCCDVVNRGVAVYKGKVFVGAYDGRLIALDAAT 183
Query: 104 GELVWS--TQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRN 161
G+ VW T ID IT + + G +G E RG + D
Sbjct: 184 GQKVWEKDTLIDHEHSYTITGAPRAFNGKVVIGQGGAEYGA--------RGYITAYDSET 235
Query: 162 GRIIWQTYMLPDNGGK----RGGYSGAAVWGSS-------------------PAIDVIRR 198
G +W+ + +P + K + A W S P ++++
Sbjct: 236 GNQLWRWFTIPGDPSKPFEDESMATAAKTWDPSTKYWINGGGGTPWDTITYDPDLNMVYL 295
Query: 199 QKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDC 258
N ++Y SIVAL+ D+G+ W +
Sbjct: 296 GTGNGAPWNRKIRSPSGGDNLYLASIVALNADTGKYVW------------------HYQE 337
Query: 259 PPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
PG + D + +L I+ +G R V++ K+GF + DR +G I
Sbjct: 338 TPGDHWDYTSTQPMILADITIDGTPRKVILHAPKNGFFFVIDRTNGKFI 386
>gi|119477630|ref|ZP_01617780.1| Alcohol dehydrogenase large subunit [marine gamma proteobacterium
HTCC2143]
gi|119449133|gb|EAW30373.1| Alcohol dehydrogenase large subunit [marine gamma proteobacterium
HTCC2143]
Length = 725
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 86/352 (24%), Positives = 140/352 (39%), Gaps = 77/352 (21%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAG--KDISATPAVANGVVYFPSWNG 58
W++HG + +RY+ I V++L L WS+ G + I AT V +GV+Y S
Sbjct: 64 WMSHGRTYSEQRYS-PLTQITADNVQDLGLAWSYDFGTQRGIEATSIVVDGVMYSTSSWS 122
Query: 59 YLYAVNAFNGALIW--EQNLSKLTGLSGTGIVVNVTVAV-------------VVAVSRSN 103
++AV+ G +W + ++K VVN VAV ++A+ +
Sbjct: 123 IVHAVDPRTGEALWTYDPKVAKDKARHACCDVVNRGVAVWQGQVFFGALDGRLIALDAAT 182
Query: 104 GELVWS-TQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNG 162
GE+ W +D IT + V G +G E + RG ++ +V +G
Sbjct: 183 GEVNWQVATVDSELPYTITGAPRVIDGKVMIGNGGAEYGV--------RGFISAYNVSDG 234
Query: 163 RIIWQTYMLPDN-----------------GGK--RGGYSGAAVWGS---SPAIDVIRRQK 200
+ W+ Y +P N G+ G G VW S P +D++
Sbjct: 235 TMAWRFYTVPGNPELGFENEAMEMAAETWNGQWWELGGGGGTVWDSMAYDPELDLLYIGV 294
Query: 201 QNNQTTKPTHPDQCISS-----DIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNN 255
N T +Q I S +++ +SIVAL D+G W Y T
Sbjct: 295 GNG-----TPWNQSIRSPGGGDNLFLSSIVALKADTGEYVW---------HYQTT----- 335
Query: 256 PDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
PG D + +L + G+ R V++ K+GF + DR G ++
Sbjct: 336 ----PGETWDYTATQHIVLADMELEGKTRKVLMQAPKNGFFYVLDRTDGTLL 383
>gi|390959129|ref|YP_006422886.1| glucose dehydrogenase [Terriglobus roseus DSM 18391]
gi|390414047|gb|AFL89551.1| glucose dehydrogenase [Terriglobus roseus DSM 18391]
Length = 723
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 79/347 (22%), Positives = 136/347 (39%), Gaps = 66/347 (19%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAGKD--ISATPAVANGVVYFPSWNG 58
W +GG + RY+ I P V NLR+ W++ G+ + P + ++ + +
Sbjct: 49 WPVYGGSKSGDRYS-PLTQITPANVMNLRVAWTYDTGETTGLQTHPLIVGRTIFVYTPSQ 107
Query: 59 YLYAVNAFNGALIWEQNLSKLTGLSGTG------------IVVNVTVAVVVAVSRSNGEL 106
+ A++A G IW + TG G I+ T++ + A+ G+
Sbjct: 108 KVMALDAATGKQIWAFDSGIKTGQPDRGFSFWTSTDGKSNILFAQTLSALWALDPDTGKP 167
Query: 107 VWST----QID---------PRPRSQITMSGSVYMGAFYVGLSSLE-EALPADQCCTFRG 152
+ + ID P IT G+VY +G + E E P G
Sbjct: 168 IPTFGNRGSIDLRENLGAESPAGTVAITTPGTVYKDLIIMGFRTGETEPSP-------HG 220
Query: 153 SLAKLDVRNGRIIWQTYMLPDNG--------GKRGGYSGAAVWGSSPAIDVIR---RQKQ 201
+ DV G + W + +P G + Y+G A + +D R
Sbjct: 221 DIRAYDVHTGALRWSFHTIPHPGEPGYETWPKEAWKYTGGANNWTGGVLDEKRGIFYAPT 280
Query: 202 NNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPG 261
+ T D+ + +D+YAN+++ALD +G++ W +D++
Sbjct: 281 GSAVTDFYGADR-VGNDLYANTLLALDASTGKLLWHFQAVHHDLW--------------- 324
Query: 262 PNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDIIW 308
D DF P+LLT+ NG+ D V K G + FDR +G ++
Sbjct: 325 ---DRDFPAPPVLLTLKHNGKMVDAVAQTTKHGQIFVFDRVTGKPLF 368
>gi|206564206|ref|YP_002234969.1| putative quinoprotein ethanol dehydrogenase precursor [Burkholderia
cenocepacia J2315]
gi|198040246|emb|CAR56229.1| putative quinoprotein ethanol dehydrogenase precursor [Burkholderia
cenocepacia J2315]
Length = 579
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 73/317 (23%), Positives = 120/317 (37%), Gaps = 54/317 (17%)
Query: 20 INPVTVRNLRLRWSFYAGKDI----SATPAVANGVVYFPSWNGYLYAVNAFNGALIW--E 73
I+ +NL+ W++ D+ ATP V ++ + +YA +A G +W E
Sbjct: 76 IDASNAKNLKQVWAYKFPADLKQGFEATPIVNGNYLFVTTPKDNVYAFDAKTGKQLWKYE 135
Query: 74 QNLSKLTGLSGTGIVVNVTVAV-------------VVAVSRSNGELVWSTQI-DPRPRSQ 119
L + + VVN VA+ V A+ G LVW Q+ +P
Sbjct: 136 PKLGAASFKTACCDVVNRGVALYGKNVYIAMLNGEVAALDAQTGNLVWKKQMFEPGLGYA 195
Query: 120 ITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNGGK-- 177
+++ GA VG S E + RG +A L+ +G +W+ Y +P G K
Sbjct: 196 FSLAPLAIDGAIVVGTSGGEYGI--------RGYIAALNPEDGSQVWKRYTIPAAGEKGA 247
Query: 178 ------RGGYSGAAVWGSSPAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDS 231
+ G A W + R P ++Y++S++ALD S
Sbjct: 248 ETWPDGMQSHGGGAAWLTGTYDAASRTLYWGVGNPGPWLAALRPGDNLYSDSLLALDAKS 307
Query: 232 GRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQ 291
G + W D + D D A +L I G+ D ++
Sbjct: 308 GNLKWHYQYTNNDTW------------------DYDGVNAAVLADIKYKGKDYDAIIHAD 349
Query: 292 KSGFAWAFDRDSGDIIW 308
++GF A DR +G +I+
Sbjct: 350 RNGFFHAIDRTTGKLIY 366
>gi|116621051|ref|YP_823207.1| quinoprotein glucose dehydrogenase [Candidatus Solibacter usitatus
Ellin6076]
gi|116224213|gb|ABJ82922.1| Quinoprotein glucose dehydrogenase [Candidatus Solibacter usitatus
Ellin6076]
Length = 747
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 74/328 (22%), Positives = 122/328 (37%), Gaps = 63/328 (19%)
Query: 20 INPVTVRNLRLRWSFYAGKDISAT--PAVANGVVYFPSWNGYLYAVNAFNGALIW----- 72
IN V L + WS+ G D+S T P V + + Y + G L A++A G +W
Sbjct: 46 INSRNVNKLDVAWSYETGDDLSYTFCPLVVDNIAYVAAKQGSLVALDASTGKQLWVYAFP 105
Query: 73 ---------------------EQNLSKLTGLSGTGIVVNVTVAVVVAVSRSNGELVWSTQ 111
+ L SG ++ +V +G+L T
Sbjct: 106 SGGRFSGIAGQRGANYWESKDRTDRRILVTSSGMLYAIDARTGKLVESFADHGKLDLKTG 165
Query: 112 IDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYML 171
ID R+++ + GS G + L L A + G + DV G+++W + +
Sbjct: 166 ID---RARMPL-GSRTPGRIFENLIILGSAT-GEGYLAPPGDIRAFDVPTGKLVWVFHTI 220
Query: 172 PDNGG------KRGGYS---GAAVWGSSPAIDVIRR--QKQNNQTTKPTHPDQCISSDIY 220
P G + Y+ G VWG +D R + +++
Sbjct: 221 PRPGELGYDTWPKDAYTYMGGVDVWGEI-TVDAKRAVVYLATASAKYELYGGDRHGDNLF 279
Query: 221 ANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTISTN 280
AN ++ALD +G+ W +D++ D D AP L T+
Sbjct: 280 ANCLIALDARTGKRLWHFQTVHHDLW------------------DTDPAAAPQLATVRHE 321
Query: 281 GRFRDVVVAVQKSGFAWAFDRDSGDIIW 308
G+ DVV K+GF + F+R +G +W
Sbjct: 322 GKAVDVVALASKNGFLYVFERATGKPLW 349
>gi|193084126|gb|ACF09793.1| alcohol dehydrogenase precursor [uncultured marine crenarchaeote
KM3-153-F8]
Length = 600
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 72/347 (20%), Positives = 129/347 (37%), Gaps = 80/347 (23%)
Query: 17 EVLINPVTVRNLRLRWSFYAG-----------KDISATPAVANGVVYFPSWNGYLYAVNA 65
+ +IN +++L ++W ++ + I TP + NG++Y S LYA+ A
Sbjct: 49 QTVINKNNIQDLSIKWIYHFESPPEIFDYVPPEGIQTTPLIHNGIIYVASGYNQLYAIEA 108
Query: 66 FNGALIW----------------EQNLSKLTGLSGTGIVVNVTVAVVVAVSRSNGELVWS 109
G +W + ++ + I + + + + GE+V+S
Sbjct: 109 SEGRPLWSFTPPLDEYSDKQFWARRLATRSLTIYQDLIYMQTSECSIYGFELTTGEIVFS 168
Query: 110 TQIDPRPRSQITMSGSVYMGAFY-VGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQT 168
P S I S Y G F + +L RG ++ D+ ++WQ
Sbjct: 169 L---PDTCSNIPGSSGEYFGTFAPIFFDNLLITRAQGNAFGGRGFVSAYDINTKELVWQW 225
Query: 169 YMLPDNGG----------------------KRGGYSGAAVWG-----SSPAIDVIRRQKQ 201
Y P GG +G WG + I + +
Sbjct: 226 YSAPPEGGDDNWGRVEHALGNIEYFPGDWGNSNLIAGGTSWGLMSIDTDEEIIYLLTGEP 285
Query: 202 NNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPG 261
+NQ P +++++S++ALDI +G+I W + +DI N+P
Sbjct: 286 SNQFDASLRP----GPNLFSSSVIALDIRTGKIQWYFQISTHDI------TNNDP----- 330
Query: 262 PNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDIIW 308
G +L I +G R VV+A KS + + D +GD+I+
Sbjct: 331 -------GWKLILADIDIDGMDRKVVLASSKSNYLYVLDAKNGDLIF 370
>gi|186471920|ref|YP_001863238.1| methanol/ethanol family PQQ-dependent dehydrogenase [Burkholderia
phymatum STM815]
gi|184198229|gb|ACC76192.1| PQQ-dependent dehydrogenase, methanol/ethanol family [Burkholderia
phymatum STM815]
Length = 575
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 67/319 (21%), Positives = 122/319 (38%), Gaps = 54/319 (16%)
Query: 20 INPVTVRNLRLRWSFYAGKDI----SATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQN 75
I+ V+NL+ W++ D+ ATP + ++ + +YA + G +W+
Sbjct: 70 IDTSNVKNLKQAWAYKFPADLQQGFEATPIINGRYLFVTTPKDNVYAFDGATGKQLWKYE 129
Query: 76 ---------------LSKLTGLSGTGIVVNVTVAVVVAVSRSNGELVWSTQI-DPRPRSQ 119
+++ L G + V + V A+ +G +VW + +P
Sbjct: 130 PKLGAEAFKNACCDVVNRGVALYGKNVYVAMLNGEVTALDAQSGAVVWKKAMFEPATGYA 189
Query: 120 ITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNGGKRG 179
+++ GA VG S E RG +A LD NG + W+ Y +P G
Sbjct: 190 FSLAPLALDGALVVGSSGGEYGA--------RGFIAALDPENGNVQWKRYTVPGAKEPNG 241
Query: 180 GY--SGAAVWGSSPAIDVIRRQKQNNQ------TTKPTHPDQCISSDIYANSIVALDIDS 231
G G +PA Q+ P D ++Y++S++ALD +
Sbjct: 242 NTWPDGMQEHGGAPAWLTGTYDPQSKTLYWGVGNPGPWLADLRPGDNLYSDSLLALDPKT 301
Query: 232 GRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQ 291
G + W +D + D D P+L I +G+ D ++
Sbjct: 302 GNLKWHYQYTRHDTW------------------DYDGVNTPVLANIKYDGKDYDAIIHAD 343
Query: 292 KSGFAWAFDRDSGDIIWFK 310
++G+ A DR +G +I+ +
Sbjct: 344 RNGYFHAIDRSNGKLIYAR 362
>gi|430005184|emb|CCF20985.1| Methanol dehydrogenase large subunit homolog [Rhizobium sp.]
Length = 634
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 81/372 (21%), Positives = 147/372 (39%), Gaps = 93/372 (25%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVT---VRNLRLRWSFYAG--KDISATPAVANGVVY--- 52
W GD N RY+ +N +T V++L+++W+F G + P V V+Y
Sbjct: 42 WAMPTGDYANHRYSK----LNQITKDNVKDLQVKWTFSTGVLRGHEGGPLVIGDVMYVHT 97
Query: 53 -FPSWNGYLYAVNAFN-GALIWE---------------QNLSKLTGLSGTGIVVNVTVAV 95
FP+ +YA++ N G ++W+ +++ I++N
Sbjct: 98 PFPN---IVYALDLKNDGKILWKYEPRQDPNVIGIMCCDTVNRGVAYGDGKIILNQADTT 154
Query: 96 VVAVSRSNGELVWST----QIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFR 151
VVA+ GE+VWS QID T + V +G+S E + R
Sbjct: 155 VVALDAKTGEVVWSVKNGDQIDGGKGESGTAAPMVVKDKVIIGVSGAEFGV--------R 206
Query: 152 GSLAKLDVRNGRIIWQTYML---------------------PDNG-----GKRGGYSGAA 185
G A ++++G + W+ Y + PD+G G++ G
Sbjct: 207 GWTAAYNLKDGSLAWKAYSMGPDSETLIDPEKTTHLGKPVGPDSGTNTWEGEQWKTGGGT 266
Query: 186 VWG---SSPAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGG 242
WG P +++ N T P Q + ++ +++A D D+G W +
Sbjct: 267 TWGWFAYDPKSNLVFYGTGNPSTWNPV---QRPGDNRWSMTLMARDADTGVAKWLYQMTP 323
Query: 243 YDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRD 302
+D + + + E ++ + NG RDV+V ++GFA+ DR+
Sbjct: 324 HDEWDYDGV-----------------NENILVDAMDINGEKRDVLVHFDRNGFAYTLDRN 366
Query: 303 SGDIIWFKLAGP 314
+G+++ K P
Sbjct: 367 TGELLVAKKYDP 378
>gi|119899134|ref|YP_934347.1| putative quinoprotein ethanol dehydrogenase [Azoarcus sp. BH72]
gi|119671547|emb|CAL95460.1| putative quinoprotein ethanol dehydrogenase [Azoarcus sp. BH72]
Length = 688
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 79/349 (22%), Positives = 138/349 (39%), Gaps = 69/349 (19%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSF--YAGKDISATPAVANGVVYFPSWNG 58
W +HG D R++ + I P V++L L WS+ + + + ATP V +GV+Y +
Sbjct: 40 WRSHGFDDAGTRFSPLK-QITPANVKDLGLVWSYDLESTRGVEATPIVVDGVMYVTAPWS 98
Query: 59 YLYAVNAFNGALIW--EQNLSKLTGLSGTGIVVNVTVAV-------------VVAVSRSN 103
++A++ +G +W + + + + VVN VAV +VA+ ++
Sbjct: 99 VVHAIDVRSGRRLWTYDPEVPRAHAKNACCDVVNRGVAVHKGVVYVASLDGRLVAIDAAS 158
Query: 104 GELVWS--TQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRN 161
G+ W T ID +T + V+ +G E + RG + D +
Sbjct: 159 GKRRWEQDTIIDRARPYTVTGAPRVFKDKVIIGNGGAEYGV--------RGYITAYDADS 210
Query: 162 GRIIWQTYMLPDNGGK----------------RGGY----SGAAVWGS---SPAIDVIRR 198
GR W+ + +P + + G Y G +W S P ++++
Sbjct: 211 GRQAWRWFAVPGDPSQPFEDESMAKAAKTWDPSGRYWEAGGGGTMWNSMVFDPELNLMYV 270
Query: 199 QKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDC 258
N ++Y SIVALD D+G+ W +
Sbjct: 271 GTGNASPWSHRQRSPGGGDNLYTASIVALDPDTGKYVW------------------HYQE 312
Query: 259 PPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
PG N D + +L + +G+ R VV+ K+GF + DR +G I
Sbjct: 313 TPGDNWDYTSTQDLILADLRIDGKLRKVVMHAPKNGFFFVVDRTNGAFI 361
>gi|452586|dbj|BAA40252.1| dehydrogenase subunit [Acetobacter pasteurianus]
Length = 742
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 76/356 (21%), Positives = 133/356 (37%), Gaps = 74/356 (20%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFY--AGKDISATPAVANGVVYFPSWNG 58
WL++G + +RY+ + IN V +L+L W + + ATP V +G++Y +
Sbjct: 55 WLSYGRTYSEQRYSPLD-QINRSNVGDLKLAWYYTLDTNRGQEATPLVVDGIMYATTNWS 113
Query: 59 YLYAVNAFNGALIWEQNLSKLTGLSGTGIVVNVTVAV---------------VVAVSRSN 103
+ A++A G L+W+ + ++ G V +VA
Sbjct: 114 KMEALDAATGKLLWQYDPKVPGNIADKGCCDTVNRGAGYWNGKVFWGTFDGRLVAADAKT 173
Query: 104 GELVWSTQIDPRPRS-----QITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLD 158
G+ VW P S T+ G+V + V + + A RG ++ D
Sbjct: 174 GKKVWEVNTIPADASLGKQRSYTVDGAVRVAKGLVLIGNGGSEFGA------RGFVSAFD 227
Query: 159 VRNGRIIWQTYMLPDNG--------------------GKRGGY----SGAAVWGS---SP 191
G++ W+ Y +P+N G +G + G VW S P
Sbjct: 228 AETGKLKWRFYTVPNNKNEPDHAVADNVLMSKAYKTWGPKGAWVRQGGGGTVWDSLVYDP 287
Query: 192 AIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCL 251
D+I N + + I S+++ SIVAL ++G W D + +T +
Sbjct: 288 VSDLIYLAVGNGSPWNYKYRSEGIGSNLFLGSIVALKPETGEYVWHFQATPMDQWDYTSV 347
Query: 252 VPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
+ M L + NG R V+ K+GF + D +G+ +
Sbjct: 348 ------------------QQIMTLDMPVNGEMRHVIWHAPKNGFFYVLDAKTGEFL 385
>gi|116625397|ref|YP_827553.1| pyrrolo-quinoline quinone [Candidatus Solibacter usitatus
Ellin6076]
gi|116228559|gb|ABJ87268.1| Pyrrolo-quinoline quinone [Candidatus Solibacter usitatus
Ellin6076]
Length = 525
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 78/341 (22%), Positives = 135/341 (39%), Gaps = 66/341 (19%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYA---------GKDISATPAVANGVV 51
W + GD RRY+ IN + +L L W + A G IS+TP NGV+
Sbjct: 33 WPTYNGDYTGRRYST-LSKINQGNINSLSLAWVYRANGALGSGPPGGRISSTPVQVNGVL 91
Query: 52 YFPSWNGYLYAVNAFNGALIW---------EQNLSKLTGLSGTGIVVNVTVAVVVAVSRS 102
YF + + +AV+A G +W E ++ G+ G + +V+++
Sbjct: 92 YF-TMPDHAWAVDARTGREVWHFRWTSHGGEHIGNRGAGVYGNWLYFLTPDCNMVSLNLK 150
Query: 103 NGELVWSTQI-DPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRN 161
+G W T + D +M+ V G+S + P G + D
Sbjct: 151 DGSERWRTSVCDLDQYYFGSMAPLVVKNHIITGVSGDDLDRP--------GYIEAHDPET 202
Query: 162 GRIIWQTYMLPDNGGKRGGYSGAAVWGSSPAID--------VIRRQKQNNQTTKPT-HPD 212
G + W+ Y +P ++ G G+ W + A+ + N PT +P
Sbjct: 203 GALQWRWYTVP----QKMGDPGSETWPNEEAMKHGGGMTWLTPTYDPELNMIYVPTGNPQ 258
Query: 213 QCIS------SDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDA 266
I+ ++++ S+VAL+ D+G++ W YF P D
Sbjct: 259 PVIAGKARPGANLFTASVVALNPDTGKMQW----------YF--------QSSPHDTHDW 300
Query: 267 DFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
D + P+L +G+ R +V ++G+ +A DR +G I
Sbjct: 301 DATQTPVLFDAEIDGKKRKIVAQASRNGYFFAIDRATGKNI 341
>gi|383770335|ref|YP_005449398.1| putative alcohol dehydrogenase [Bradyrhizobium sp. S23321]
gi|381358456|dbj|BAL75286.1| putative alcohol dehydrogenase precursor [Bradyrhizobium sp.
S23321]
Length = 582
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 72/309 (23%), Positives = 125/309 (40%), Gaps = 57/309 (18%)
Query: 20 INPVTVRNLRLRWSFYAG--KDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWE---- 73
IN V+NL W+F G + A P V NGV++ + G + A++A G W
Sbjct: 72 INTSNVKNLTPVWTFATGVVEGHEAPPLVNNGVMFVTTPMGQVIAIDARTGDEYWRYKRQ 131
Query: 74 --QNLSKL------TGLSGTGIVVNVTVAVVVAVSRSNGELVWSTQI-DPRPRSQITMSG 124
+L +L GL + + T VVA+ G+++W T++ D R +T+
Sbjct: 132 LPDDLFQLHPTNRGVGLWEDKLYLATTDDHVVALDAKTGKVLWDTKVQDYRKGQYMTLMP 191
Query: 125 SVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNG--------G 176
+ G VG S E + RG +A D ++G+ +W+T+ +P G G
Sbjct: 192 LIIEGKVIVGGSGGELGV--------RGYVAAFDAKDGKELWRTFTIPGEGEPGHDTWQG 243
Query: 177 KRGGYSGAAVWGSSPAIDVIRRQKQNNQTTKP----THPDQCISSDIYANSIVALDIDSG 232
G + W + + P THP ++Y +S++ALD ++G
Sbjct: 244 DDWKTGGGSAWMTGNYDKDTKTIYWGVGNAAPWPGETHP----GDNLYTSSVLALDPNNG 299
Query: 233 RIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQK 292
+I Y ++ + D D +APML+ + +GR ++ +
Sbjct: 300 KIK------TYHQYH------------QNDSWDWDEVDAPMLIDLQRDGRTIKSLIHPGR 341
Query: 293 SGFAWAFDR 301
W +R
Sbjct: 342 DAIFWVLER 350
>gi|295676335|ref|YP_003604859.1| PQQ-dependent dehydrogenase [Burkholderia sp. CCGE1002]
gi|295436178|gb|ADG15348.1| PQQ-dependent dehydrogenase, methanol/ethanol family [Burkholderia
sp. CCGE1002]
Length = 575
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 67/317 (21%), Positives = 121/317 (38%), Gaps = 54/317 (17%)
Query: 20 INPVTVRNLRLRWSFYAGKDI----SATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQN 75
I+ V L+ WS+ ++ ATP V G ++ + +YA + G +W+
Sbjct: 70 IDASNVAGLKQAWSYQFPAELKQGFEATPIVNGGYLFVSTPKDNVYAFDVKTGTQLWKYE 129
Query: 76 ---------------LSKLTGLSGTGIVVNVTVAVVVAVSRSNGELVWSTQI-DPRPRSQ 119
+++ L G + V + V A+ +G +VW Q+ +P
Sbjct: 130 PKLGAQSFRTACCDVVNRGVALYGKNVYVAMLSGEVAAIDAQSGNVVWKKQMFEPGLGYA 189
Query: 120 ITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNGGK-- 177
+++ GA VG S E + RG +A L+ +G IIW+ Y +P G K
Sbjct: 190 FSLAPLALDGAIVVGTSGGEYGI--------RGYIAALNPDDGSIIWKRYTIPSAGEKGS 241
Query: 178 ------RGGYSGAAVWGSSPAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDS 231
+ G A W + + P ++Y++S++AL+ +
Sbjct: 242 DTWPDGMQEHGGGAAWLTGTYDAATQTLYWGVGNPGPWLAALRPGDNLYSDSLLALNPKN 301
Query: 232 GRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQ 291
G + W D + D D P+L I+ G+ D ++
Sbjct: 302 GELKWHYQYTNNDTW------------------DYDGVNTPVLANITYKGKPYDAIIHAD 343
Query: 292 KSGFAWAFDRDSGDIIW 308
++GF A DR +G +I+
Sbjct: 344 RNGFFHAIDRKTGKLIY 360
>gi|392951387|ref|ZP_10316942.1| putative quinoprotein ethanol dehydrogenase [Hydrocarboniphaga
effusa AP103]
gi|391860349|gb|EIT70877.1| putative quinoprotein ethanol dehydrogenase [Hydrocarboniphaga
effusa AP103]
Length = 718
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 77/348 (22%), Positives = 133/348 (38%), Gaps = 68/348 (19%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAGKD--ISATPAVANGVVYFPSWNG 58
W+++G + +R++ + I+ V L L WS+ D ATP V +GV+Y
Sbjct: 55 WMSYGRTYDEQRFSPLKK-ISTANVNGLGLAWSYKLDVDRATEATPVVVDGVMYVTGAFS 113
Query: 59 YLYAVNAFNGALIW--EQNLSKLTGLSGTGIVVNVTVAV-------------VVAVSRSN 103
+ A++ G +W + + + G V N VAV ++A+
Sbjct: 114 IVSALDPVTGKELWKFDPQVPRDKDRDGCCDVANRGVAVWKGKVFVGAYDGRLIALDSKT 173
Query: 104 GELVWSTQ--IDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRN 161
G+ VW T ID +T + V G +G E + RG + D +
Sbjct: 174 GQKVWETDTVIDHERSYTVTGAPRVVKGKVIIGNGGAELGV--------RGYVGAYDADS 225
Query: 162 GRIIWQTYMLPDNGGK----------RGGYSGAAVW------------GSSPAIDVIRRQ 199
G+++W+ + +P + + R +SG W P +D++
Sbjct: 226 GKLLWRFFTVPGDPSQPAEDKAMEMARKTWSGDTYWKFGGGGTVWDAMAYDPDLDLLYIG 285
Query: 200 KQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCP 259
N T +++ +SIVAL DSG W Y T
Sbjct: 286 TGNGSTWNRQVRSPGGGDNLFLSSIVALKPDSGEYVW---------HYQTT--------- 327
Query: 260 PGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
PG + D + ML ++ G R V++ K+GF + DR +G ++
Sbjct: 328 PGDSWDYTATQHIMLADLTIGGEKRKVLMQAPKNGFFYVLDRATGKLL 375
>gi|347528246|ref|YP_004834993.1| quinohemoprotein alcohol dehydrogenase [Sphingobium sp. SYK-6]
gi|345136927|dbj|BAK66536.1| quinohemoprotein alcohol dehydrogenase [Sphingobium sp. SYK-6]
Length = 706
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 85/362 (23%), Positives = 139/362 (38%), Gaps = 88/362 (24%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSF-------YAGKDISATPAVANGVVYF 53
W G D+ +RY+ E IN V L L + F + + ATP + G++YF
Sbjct: 31 WPLIGRDILGQRYSPLE-QINKDNVDKLGLAFEFTDFVVRGRTHRGVEATPLMIGGMLYF 89
Query: 54 PSWNGYLYAVNAFNGALIW--EQNLSKLTGLSGTGIVVNVTVAV-------------VVA 98
G YAVNA G +W + +G VVN VAV + A
Sbjct: 90 SGPWGVAYAVNARTGKHLWTYDPEADGQSGQHSCCDVVNRGVAVDGKRLFTASSDGHLAA 149
Query: 99 VSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLD 158
V G+ +W+ R + +G+ Y+ YV + + + A RG + D
Sbjct: 150 VDIKTGKELWNVDTIVDRRWNYSSTGAPYIAGKYVVIGNSGADMGA------RGYASAYD 203
Query: 159 VRNGRIIWQTYMLPDNGGKRGGYSGAAVWGSSPAIDVIRR-------------------- 198
+ G++ W+ +++P G R G +P + RR
Sbjct: 204 MATGKLAWRFWVVP--GDPRAGPD------ETPDVTAARRTWPIDTRWELGLGGNPWDGL 255
Query: 199 --QKQNNQTTKPT-----HP------DQCISSDIYANSIVALDIDSGRIAWAKPLGGYDI 245
+ N T T HP ++ +Y +SIVALD D+GR+ W
Sbjct: 256 AYDPETNTTFIGTGNGGPHPAWLRSASGTVTDQLYLSSIVALDADTGRLKW--------- 306
Query: 246 FYFTCLVPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGD 305
Y T PG + D ++ + +G+ R V++ K+GF + DR +G+
Sbjct: 307 HYQTT---------PGDSWDYAATSPFVMADLEIDGKPRKVIMQAPKNGFFYVLDRRTGE 357
Query: 306 II 307
++
Sbjct: 358 LL 359
>gi|148553924|ref|YP_001261506.1| pyrrolo-quinoline quinone [Sphingomonas wittichii RW1]
gi|148499114|gb|ABQ67368.1| Pyrrolo-quinoline quinone [Sphingomonas wittichii RW1]
Length = 698
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 86/356 (24%), Positives = 141/356 (39%), Gaps = 78/356 (21%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAGKD--ISATPAVANGVVYFPSWNG 58
W +G D +R++ + IN TV L L WS D ATP + +GV+Y +
Sbjct: 45 WPYYGRDEKEQRFSPLD-QINRATVAKLGLAWSAELDSDRGQEATPIMVDGVIYVSTAWS 103
Query: 59 YLYAVNAFNGALIW--EQNLSKLTGLSGTGIVVNVTVAV-------------VVAVSRSN 103
+YA +A G +W + + + + S VN VAV +VAV
Sbjct: 104 LVYAFDAATGKQLWSYDPQVPRESLASACCDAVNRGVAVHGGKVFVGTLDGRLVAVDAKT 163
Query: 104 GELVWSTQIDP---RPRS-QITMSGSV--YMGAFYVGLSSLEEALPADQCCTFRGSLAKL 157
G+L W Q+D +P++ + T++G+V +G S E + RG +
Sbjct: 164 GKLAW--QVDTLAGQPKTMRYTITGAVRAVKDKVVIGNSGAEFGV--------RGFVTAY 213
Query: 158 DVRNGRIIWQTYMLPDNGGKRGGYSGAAV--------WGS------------------SP 191
D G++ W+ Y+ P+ GK G + V WG P
Sbjct: 214 DAATGKLAWRFYLTPNPQGKPDGAASDEVLLARAQSTWGDGEWRNSGGGGTAWDALTYDP 273
Query: 192 AIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCL 251
D++ N +++ +SIVA+D D+GR AW Y T
Sbjct: 274 DADLLYIGAGNGGPFDYQVRSGGKGDNLFLSSIVAVDPDTGRYAW---------HYQTT- 323
Query: 252 VPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
P + D + M + G+ RDVV+ K+G+ + DR +G+++
Sbjct: 324 --------PSDSWDYTATQQIMGARLVIGGKPRDVVMQAPKNGYFYVLDRKTGELL 371
>gi|9957182|gb|AAG09249.1|AF176640_2 alcohol dehydrogenase [Pseudomonas stutzeri]
Length = 695
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 81/350 (23%), Positives = 136/350 (38%), Gaps = 73/350 (20%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRW--SFYAGKDISATPAVANGVVYFP-SWN 57
WL+HG +R++ + I+ V L L W + + ATP V++GV+Y SW+
Sbjct: 43 WLSHGRTYAEQRFSPLKQ-IDAGNVGKLGLAWYLDLENNRGLEATPLVSDGVLYASLSWS 101
Query: 58 GYLYAVNAFNGALIWEQN---------------LSKLTGLSGTGIVVNVTVAVVVAVSRS 102
+ AV+ +G +W+ + +++ L + V ++A+
Sbjct: 102 RVM-AVDLRSGKRLWQFDPQVDRGHSRYTCCDAVNRGVALWNGKVYVGALDGRLIALDAK 160
Query: 103 NGELVWSTQI-DPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRN 161
G +WS Q DP IT + V G +G E + RG + D
Sbjct: 161 TGRELWSEQTTDPAKPYSITGAPRVVKGKVIIGNGGAEYGV--------RGFFSAYDAET 212
Query: 162 GRIIWQTYMLP---------------------DNGGKRGGYSGAAVWGS---SPAIDVIR 197
G++ W+ Y +P D K GG G VW S P +D++
Sbjct: 213 GKMAWRFYTVPGDPAQPYEHPELAEAAKTWKGDQYWKLGG--GGTVWDSMAYDPELDLLY 270
Query: 198 RQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPD 257
N ++Y +SI+AL DSG++ W Y T
Sbjct: 271 IGTGNGSPWNREIRSPGGGDNLYLSSILALRPDSGKLLW---------HYQTT------- 314
Query: 258 CPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
PG D + L T+ +G+ R V++ K+GF + DR +G+++
Sbjct: 315 --PGETWDFTATQQITLATLELDGKPRKVLMQAPKNGFFYVLDRATGELL 362
>gi|18645097|gb|AAL76398.1| PpQ dehydrogenase family protein [uncultured marine
proteobacterium]
Length = 750
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 81/348 (23%), Positives = 134/348 (38%), Gaps = 68/348 (19%)
Query: 1 WLNHGGDLNNRRYAYGEVL--INPVTVRNLRLRW--SFYAGKDISATPAVANGVVYFPSW 56
WL GGD R AY L IN V L W + ATP + +GV+Y
Sbjct: 56 WLTGGGDY---RQAYFSPLKHINRSNVTELGYAWHIDLPSEHGYEATPLMVDGVLYGSGP 112
Query: 57 NGYLYAVNAFNGALIWEQN---------------LSKLTGLSGTGIVVNVTVAVVVAVSR 101
G +AV+A NG +W+ N +++ LSG + V + A+ +
Sbjct: 113 QGIAFAVDASNGRSLWQFNPEIDTQFMRKVCCGVVNRGVALSGETVFVAALDGHLFALDK 172
Query: 102 SNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRN 161
+G +VW + T++G+ Y+ V + + A RG + D
Sbjct: 173 IDGTVVWRADTFMDRKRGYTITGAPYIAGDLVIIGNAGAEFDA------RGYITAYDRHT 226
Query: 162 GRIIWQTYMLPDNGGKRGGYS----GAAVWGSSP---------AIDVIRRQKQNNQTTKP 208
G W+ + +P++ + AA W D + Q+N
Sbjct: 227 GEQRWRFFTVPNSPNPPFEHPELEVAAATWDPDSLWQVGLGGTVWDAMAFDPQHNLLYVG 286
Query: 209 T-----HPDQCIS----SDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCP 259
T +P + S ++Y SI+A++ D GR+ W Y T
Sbjct: 287 TGNAAPYPRKLRSPVGGDNLYLASILAINPDDGRLVW---------HYQTT--------- 328
Query: 260 PGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
PG N D + +L ++ G+ R V++ K+GF + DR +G++I
Sbjct: 329 PGDNWDFTATQKMILADLTIEGKSRQVLMQAPKNGFFYVLDRVTGELI 376
>gi|339022329|ref|ZP_08646281.1| alcohol dehydrogenase large subunit [Acetobacter tropicalis NBRC
101654]
gi|338750662|dbj|GAA09585.1| alcohol dehydrogenase large subunit [Acetobacter tropicalis NBRC
101654]
gi|347800405|dbj|BAK86306.1| membrane-bound alcohol dehydrogenase subunit I [Acetobacter
tropicalis]
Length = 742
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 77/358 (21%), Positives = 132/358 (36%), Gaps = 78/358 (21%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFY--AGKDISATPAVANGVVYFPSWNG 58
WL++G +RY+ + IN V NL+L W F + TP V +GV+Y +
Sbjct: 55 WLSYGRTYTEQRYSPLDE-INKSNVGNLKLAWYFDLDTNRGQEGTPLVVDGVMYATTNWS 113
Query: 59 YLYAVNAFNGALIWEQNLSKLTGLSGTGIVVNVTVAV---------------VVAVSRSN 103
+ A++A G L+W+ + ++ G V +VA+
Sbjct: 114 KMKALDAATGKLLWQYDPRVPGNIADKGCCDTVNRGAGYWNGKVFFGTFDGRLVALDAKT 173
Query: 104 GELVWSTQIDPRPRS-----QITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLD 158
G+ VW P+ S T+ G+V + V + + A RG ++ D
Sbjct: 174 GKKVWEVNTIPKEASLGQQRSYTVDGAVRVAKGLVLIGNGGSEFGA------RGFVSAFD 227
Query: 159 VRNGRIIWQTYMLPDNGG--------------------------KRGGYSGAAVWGS--- 189
G++ W+ Y +P+N K+GG G VW S
Sbjct: 228 AETGKLKWRFYTVPNNKNEADHAASDNVLMNKAYKTWSPTGAWTKQGG--GGTVWDSIVY 285
Query: 190 SPAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFT 249
P D++ N + I +++ SIVA+ ++G W D + +T
Sbjct: 286 DPVADLVYLAVGNGSPWNYKYRTDGIGDNLFLGSIVAVKPETGEYVWHFQETPMDQWDYT 345
Query: 250 CLVPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
+ + M L + NG R V+V K+GF + D +G+ +
Sbjct: 346 SV------------------QQIMTLDMPINGENRHVIVHAPKNGFFYILDAKTGEFL 385
>gi|381202465|ref|ZP_09909579.1| putative alcohol dehydrogenase [Sphingobium yanoikuyae XLDN2-5]
Length = 695
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 73/329 (22%), Positives = 126/329 (38%), Gaps = 68/329 (20%)
Query: 20 INPVTVRNLRLRWSFYAGKDIS--ATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQN-- 75
IN +R L L WS ++S ATP NG++YF G +YAV+ +G LIW+ +
Sbjct: 57 INTANIRKLGLAWSLDLEGEVSLEATPLAVNGILYFSGSYGAVYAVDGASGRLIWKYDPE 116
Query: 76 --------------LSKLTGLSGTGIVVNVTVAVVVAVSRSNGELVWSTQIDPRPRSQIT 121
+++ I + V ++A+ G + WS P P + +
Sbjct: 117 IWKVNPTRQAMGMGVNRGVAYDNGRIFIGVLDGRLIALDAKTGAVAWSVNTLP-PGTMHS 175
Query: 122 MSGS--VYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYMLPD------ 173
++G+ + G +G + RG + D + G +W+ + +P
Sbjct: 176 LTGAPRTFNGKVIIGNGGAD--------IGQRGFVTAYDQKTGAQVWRFWTVPGSPEQNA 227
Query: 174 ------------NGGKRGGYSGAAVWGS---SPAIDVIRRQKQNNQTTKPTHPDQCISSD 218
NG +G VW P ++ I N P +
Sbjct: 228 DDPVMEMAAKSWNGSYWKTGTGGTVWNGMTFDPELNRIYLGVGNAGPYDPEKRSPGGGDN 287
Query: 219 IYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTIS 278
++ SIVALD DSG+ W ++ + D N+ A T++
Sbjct: 288 LFVASIVALDADSGKYIW----------HYQQNPRESWDYKATANMIA--------ATVT 329
Query: 279 TNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
+GR R V++ +GF + DR++G +I
Sbjct: 330 IDGRPRQVLMQQPTNGFFYVLDRETGKLI 358
>gi|256574662|dbj|BAH98134.1| alcohol dehydrogenase subunit I [Acetobacter pasteurianus]
Length = 742
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 76/353 (21%), Positives = 130/353 (36%), Gaps = 68/353 (19%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFY--AGKDISATPAVANGVVYFPSWNG 58
WL++G + +RY+ + IN V +L+L W + + ATP V +G++Y +
Sbjct: 55 WLSYGRTYSEQRYSPLD-QINRSNVGDLKLAWYYTLDTNRGQEATPLVVDGIMYATTNWS 113
Query: 59 YLYAVNAFNGALIWEQNLSKLTGLSGTGIVVNVTVAV---------------VVAVSRSN 103
+ A++A G L+W+ + ++ G V +VA
Sbjct: 114 KMEALDAATGKLLWQYDPKVPGNIADKGCCDTVNRGAGYWNGKVFWGTFDGRLVAADAKT 173
Query: 104 GELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTF--RGSLAKLDVRN 161
+ VW P S GA V + L + F RG ++ D
Sbjct: 174 RKKVWEVNTIPADASLGKQRSYTVDGAVRVAKGLV---LIGNGGAEFGARGFVSAFDAET 230
Query: 162 GRIIWQTYMLPDNG--------------------GKRGGY----SGAAVWGS---SPAID 194
G++ W+ Y +P+N G +G + G VW S P D
Sbjct: 231 GKLKWRFYTVPNNKNEPDHAASDNILMNKAYKTWGPKGAWVRQGGGGTVWDSLVYDPVSD 290
Query: 195 VIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPN 254
+I N + + I S+++ SIVAL ++G W D + +T +
Sbjct: 291 LIYLAVGNGSPWNYKYRSEGIGSNLFLGSIVALKPETGEYVWHFQATPMDQWDYTSV--- 347
Query: 255 NPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
+ M L + NG R V+V K+GF + D +G+ +
Sbjct: 348 ---------------QQIMTLDMPVNGEMRHVIVHAPKNGFFYVLDAKTGEFL 385
>gi|110083415|dbj|BAE97418.1| alcohol dehydrogenase subunit I [Acetobacter syzygii]
Length = 743
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 74/358 (20%), Positives = 134/358 (37%), Gaps = 78/358 (21%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFY--AGKDISATPAVANGVVYFPSWNG 58
WL++G + +RY+ + IN V NL+L W F + + TP + +G++Y +
Sbjct: 55 WLSYGRTYSEQRYSPLD-QINRSNVGNLKLAWYFNLDSNRGQEGTPLIVDGIMYATTNWS 113
Query: 59 YLYAVNAFNGALIWEQNLSKLTGLSGTGIVVNVTVAV---------------VVAVSRSN 103
+ A++A G L+WE + ++ G V ++A+
Sbjct: 114 KMKALDAATGKLLWEYDPKVPGNIADKGCCDTVNRGAGYWNGKVYFGTFDGRLIALDAKT 173
Query: 104 GELVWSTQIDPRPRS-----QITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLD 158
G+ W P S T+ G+V + V + + A RG ++ D
Sbjct: 174 GKKAWEVNTIPADASLGKQRSYTVDGAVRIAKGLVLIGNGGAEFGA------RGFVSAFD 227
Query: 159 VRNGRIIWQTYMLPDNGG--------------------------KRGGYSGAAVWGS--- 189
G++ W+ Y +P+N ++GG G VW S
Sbjct: 228 AETGKLKWRFYTVPNNKNEPDHAASDNVLMTNAYKTWGPNGAWVRQGG--GGTVWDSIVY 285
Query: 190 SPAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFT 249
P D++ N + + I ++++ SIVA+ ++G W D + +T
Sbjct: 286 DPVSDLVYLAVGNGSPWNYKYRSEGIGNNLFLGSIVAVKPETGEYVWHFQATTMDQWDYT 345
Query: 250 CLVPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
+ + M L + NG R VVV K+GF + D +G+ +
Sbjct: 346 SV------------------QQVMTLDMPINGEMRHVVVQAPKNGFFYVLDAKTGEFL 385
>gi|297172225|gb|ADI23204.1| glucose dehydrogenase [uncultured Gemmatimonadales bacterium
HF0770_11C06]
Length = 650
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 86/334 (25%), Positives = 134/334 (40%), Gaps = 62/334 (18%)
Query: 4 HGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAGKD---ISATPAVANGVVYFPSWNGYL 60
+G D NR A + IN V L +W FY D I TP V GV+Y + N +
Sbjct: 158 NGSDSANRHSALAQ--INRDNVERLTAQW-FYPIPDMRMIEGTPVVVAGVMYVTAAN-RV 213
Query: 61 YAVNAFNGALIWEQNLSKLTGLSGT-GIVVNVTVAV-------------VVAVSRSNGEL 106
YA++A G IW + + GL G I +N VA+ V+A+ R GEL
Sbjct: 214 YALDASTGREIWRYSQPRTPGLVGDPAIGLNRGVAIREDRLFTVTDHAHVIALDRFTGEL 273
Query: 107 VWSTQI-DPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRII 165
+W ++ D R + V G+S+ + L RG L V G
Sbjct: 274 IWDAEMADYRDHYGAVAAPLVVEDLVIAGISAGDTGL--------RGFLDAYHVSTGERA 325
Query: 166 WQTYMLP-----------DNGGKRGGYSGAAVWGSSPA-IDVIRRQKQNNQTTKPTHPDQ 213
W+ + +P D R G + GS A +D++ N + D+
Sbjct: 326 WRFWTIPAPNEPGSETWGDPAVLRRGCGATWLTGSYDADLDLLYWPTGN--PCPDLNGDR 383
Query: 214 CISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPM 273
++Y NS+VAL +G + W F FT P D D E +
Sbjct: 384 RPGDNLYTNSVVALRPTTGALEW--------YFQFT----------PHDTHDWDAQEPLL 425
Query: 274 LLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
L+ +G+ R +++ ++GF + DR +G+ +
Sbjct: 426 LVDEEFHGQPRKLLLQGNRNGFFYVLDRITGEFL 459
>gi|170293795|gb|ACB12932.1| Adh [Thauera sp. E7]
Length = 679
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 84/352 (23%), Positives = 132/352 (37%), Gaps = 72/352 (20%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFY---AGKDISATPAVANGVVYFPSWN 57
W HG D R + I+ +V L L W F + ATP + G +Y
Sbjct: 24 WPRHGLDSAETRISPLRA-IDTASVAQLGLAWHFRFDPRRASVEATPIMVGGTLYVSGPW 82
Query: 58 GYLYAVNAFNGALIWEQN--LSKLTGLSGTGIVVNVTVAV-------------VVAVSRS 102
G +YA++A NG L W+ + + G+ VVN VAV + A+ S
Sbjct: 83 GVVYAIDARNGRLRWQHDPQVPAGKGMHACCDVVNRGVAVEDGRVFVATIDGRLQALDSS 142
Query: 103 NGELVWST-QIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRN 161
+G L+WST DP IT + V G +G E + RG ++ D
Sbjct: 143 DGRLLWSTPTFDPELPYTITGAPRVADGLVMIGNGGAEYGV--------RGFVSAYDAAT 194
Query: 162 GRIIWQTYMLPDN--GGKRGGYS---------------------GAAVWGS---SPAIDV 195
G + W+ Y +P N G G S G VW + P +D+
Sbjct: 195 GALRWRFYTVPGNPAEGPDGAISDLPLQALALPTWQGEWWRYGGGGTVWDAMAWDPELDL 254
Query: 196 IRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNN 255
+ N +++ +SIVA+ +G W Y T
Sbjct: 255 LYFGVGNGSPHDRDLRSPGGGDNLFLSSIVAVRRATGEYVW---------HYQTT----- 300
Query: 256 PDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
PG + D + +L + +G R V++ K+GF + DR +G+++
Sbjct: 301 ----PGDSWDYTATQHMILAELEIDGAPRKVLMQAPKNGFFYVLDRATGELL 348
>gi|406660236|ref|ZP_11068370.1| Quinate/shikimate dehydrogenase (quinone) [Cecembia lonarensis LW9]
gi|405556114|gb|EKB51083.1| Quinate/shikimate dehydrogenase (quinone) [Cecembia lonarensis LW9]
Length = 708
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 82/355 (23%), Positives = 134/355 (37%), Gaps = 75/355 (21%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAG-----KDISATPAVANGVVYFPS 55
W++ GG + RY+ IN V+NL + W+F G I P V +G++Y S
Sbjct: 32 WMHFGGTNDAARYS-SISQINKENVKNLEVAWTFNTGDATERSQIQTQPIVVDGILYGVS 90
Query: 56 WNGYLYAVNAFNGALIWEQNLSKLTG--------------------------LSGTGIVV 89
++A+ A G IW N ++ G S I +
Sbjct: 91 PQLNVFALRADTGKPIWRFNPFQILGGENSWAGLNRGLSYWEDGEDKRIFSSASNYLIAL 150
Query: 90 NVTVAVVVAVSRSNGELVWSTQIDPRPRSQITMS---GSVYMGAFYVGLSSLEEALPADQ 146
+ T + NG + ++D + +S G +Y +G+ L E L A
Sbjct: 151 DATTGRPIEDFGENGMVDLKKELDTDMEDFLLVSNSPGVIYQDKIIIGMR-LSEGLDAAP 209
Query: 147 CCTFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYS-----------GAAVWGSSPAIDV 195
G + +VR G+ W + +P G + GY GA W ++D
Sbjct: 210 -----GHIRAYNVRTGKREWIFHTIPQEG--QFGYDTWDPNYIQYIGGANNWAGM-SLDE 261
Query: 196 IR--RQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVP 253
R T ++++ANSI+ALD ++G W +D++
Sbjct: 262 NRGIVYVPTGSATYDFWGGYRHGANLFANSIIALDANTGERIWHFQGVHHDMW------- 314
Query: 254 NNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDIIW 308
D DF P L+ I +G++ D V K G+ + FDR +G+ IW
Sbjct: 315 -----------DRDFPANPNLIRIKKDGKWIDAVAQTSKQGYVFVFDRVTGEPIW 358
>gi|116622229|ref|YP_824385.1| pyrrolo-quinoline quinone [Candidatus Solibacter usitatus
Ellin6076]
gi|116225391|gb|ABJ84100.1| Pyrrolo-quinoline quinone [Candidatus Solibacter usitatus
Ellin6076]
Length = 518
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 78/333 (23%), Positives = 131/333 (39%), Gaps = 52/333 (15%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSF--YAGKDISATPAVANGVVYFPSWNG 58
W + G+ RY+ IN V L RW F + ++ TP V NG++Y + +
Sbjct: 22 WQMYAGNYAGWRYSE-LAQINTSNVAALAPRWIFQTHVPGNMETTPLVQNGLMYLTAPSN 80
Query: 59 YLYAVNAFNGALIWE------QNLSKLTGLSGTGIVV------NVTVA-VVVAVSRSNGE 105
+ +A++ G IW L+ G G V VT+ ++A+ + G+
Sbjct: 81 HAFALDLRTGHAIWHYSRTPPHPLNLCCGEVNRGFAVLGNRLFKVTIEDTLLALDIATGK 140
Query: 106 LVWSTQI-DPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRI 164
+W T + D R T++ V VG + E + RG + G
Sbjct: 141 PLWETTLGDYRKGYSGTLAPLVVKDKVLVGTAGAEFGI--------RGFVDAYSPETGER 192
Query: 165 IWQTYMLP---DNGGKRGGYSGAAVWGSSPAIDVIRRQKQNNQTTKPTHPDQCISSDI-- 219
+W+ Y +P + GG+ G G S I + N +P + D+
Sbjct: 193 LWRFYTIPLAGEPGGETWGKESNLRVGGSTWITGTYDPELNLTYWGTGNPGPDMDGDVRP 252
Query: 220 ----YANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLL 275
Y S+VALD D+G++ W F FT P D D P+L+
Sbjct: 253 GDNLYTCSLVALDADTGKMKWH--------FQFT----------PHDTHDWDAISDPVLV 294
Query: 276 TISTNGRFRDVVVAVQKSGFAWAFDRDSGDIIW 308
++ GR V+ ++G+ +A DR +G ++
Sbjct: 295 DLAIEGRKVKAVIQANRNGYFYAIDRTNGKFLF 327
>gi|148260568|ref|YP_001234695.1| Pyrrolo-quinoline quinone [Acidiphilium cryptum JF-5]
gi|326403760|ref|YP_004283842.1| putative pyrrolo-quinoline quinone [Acidiphilium multivorum AIU301]
gi|338980849|ref|ZP_08632097.1| Pyrrolo-quinoline quinone [Acidiphilium sp. PM]
gi|146402249|gb|ABQ30776.1| Pyrrolo-quinoline quinone [Acidiphilium cryptum JF-5]
gi|325050622|dbj|BAJ80960.1| putative pyrrolo-quinoline quinone [Acidiphilium multivorum AIU301]
gi|338208226|gb|EGO96106.1| Pyrrolo-quinoline quinone [Acidiphilium sp. PM]
Length = 568
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 82/334 (24%), Positives = 142/334 (42%), Gaps = 58/334 (17%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLR---LRWSFYAGKDISATPAVANGVVYF--PS 55
WL G D +N R++ + IN V++L + + Y+ TP V NG++Y P
Sbjct: 77 WLVSGRDYDNSRFSPLK-QINAANVKDLAPVAIAQTGYSAS-FETTPIVVNGIMYLTTPM 134
Query: 56 WNGY--LYAVNAFNGALIWEQNLS-----------KLTGLSGTGIVVNVTVA-VVVAVSR 101
N L A+NA G +W + + G+V +T+ ++AV+
Sbjct: 135 VNSKQALIAMNATTGQTLWTYTYTDGQIQICCGPVNRGAAASNGMVYMLTLDDHLIAVNA 194
Query: 102 SNGELVWSTQI-DPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVR 160
G+ W TQ+ DPR TM+ +VY +G + E + RG +A D +
Sbjct: 195 RTGKQEWMTQVADPRYGYSETMAPTVYKNMVIIGSAGGEWPI--------RGFIAAYDAQ 246
Query: 161 NGRIIWQTYMLPDNGGKRG---GYSGAAVWGSSPAIDVIRRQKQNNQTTKPTHPDQCISS 217
G+ IW+ + G G G VW ++P +D +R T P +PD ++
Sbjct: 247 TGKQIWRFHTTDSKAGWEGDSWKTGGGTVW-TTPTVDP-KRGLVIFSTGNP-NPDLNGAA 303
Query: 218 ----DIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPM 273
+ Y +SIVAL+I +G++ W +D++ D D M
Sbjct: 304 RKGDNRYTDSIVALNIHTGKLVWYYQEVKHDVW------------------DYDAVSNAM 345
Query: 274 LLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
L+ + +G+ V K+ + + +R++G +I
Sbjct: 346 LIDVKDHGKMVPAVGEAGKTAWYYIVNRETGKLI 379
>gi|390568779|ref|ZP_10249072.1| methanol/ethanol family PQQ-dependent dehydrogenase [Burkholderia
terrae BS001]
gi|389939292|gb|EIN01128.1| methanol/ethanol family PQQ-dependent dehydrogenase [Burkholderia
terrae BS001]
Length = 575
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 67/321 (20%), Positives = 122/321 (38%), Gaps = 58/321 (18%)
Query: 20 INPVTVRNLRLRWSFYAGKDI----SATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQN 75
I+ V+NL+ W++ ++ ATP + ++ + +YA +A G +W+
Sbjct: 70 IDTSNVKNLKQTWAYKFPAELQQGFEATPIINGRYLFVTTPKDNVYAFDAATGKQLWKYE 129
Query: 76 ---------------LSKLTGLSGTGIVVNVTVAVVVAVSRSNGELVWS-TQIDPRPRSQ 119
+++ L G + V + V A+ G LVW + +P
Sbjct: 130 PKLGAEAFKNACCDVVNRGVALYGKNVYVAMLNGEVAALDAQTGALVWKKSMFEPATGYA 189
Query: 120 ITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNGGKRG 179
+++ G+ VG S E RG +A LD NG + W+ Y +P G K
Sbjct: 190 FSLAPLALDGSIVVGSSGGEYGA--------RGFIAALDPENGNVQWKRYTVP--GAKEP 239
Query: 180 G----------YSGAAVWGSSPAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDI 229
G + GA W + + P D ++Y++S++ALD
Sbjct: 240 GGNTWPDGTQEHGGAPAWLTGTFDPSSKTLYWGVGNPGPWLADLRPGDNLYSDSLLALDP 299
Query: 230 DSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVA 289
+G + W +D + D D P+L I G+ D ++
Sbjct: 300 KTGNLKWHYQYTRHDTW------------------DYDGVNTPVLANIKYEGKDYDAIIH 341
Query: 290 VQKSGFAWAFDRDSGDIIWFK 310
++G+ A DR +G +I+ +
Sbjct: 342 ADRNGYFHAIDRSNGKLIYAR 362
>gi|365879661|ref|ZP_09419073.1| putative dehydrogenase xoxF precursor [Bradyrhizobium sp. ORS 375]
gi|365292330|emb|CCD91604.1| putative dehydrogenase xoxF precursor [Bradyrhizobium sp. ORS 375]
Length = 597
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 83/359 (23%), Positives = 138/359 (38%), Gaps = 82/359 (22%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAGKD--ISATPAVANGVVYFPS--- 55
W D N RY+ + IN L+L W+F G D A P + +G++Y
Sbjct: 7 WPMPARDYANTRYSPLD-QINTGNAGQLQLAWTFSIGADRGQEAAPIIVDGIMYVVGPYD 65
Query: 56 --WNGYLYAVNAFNGALIWEQNLSKLTGLSGTGI--VVNVTVAV-------------VVA 98
+ ++A++A G L W G VVN +A VA
Sbjct: 66 GPYPNRVFALDATTGDLKWSYAPKPEPAAKGVACCDVVNRGLAFDNGKVFLNTLDDNTVA 125
Query: 99 VSRSNGELVWSTQIDPRPRSQ-ITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKL 157
+ G+ +W T++ + + ITM+ V G VG S E + RG + L
Sbjct: 126 IDAKTGKEIWHTKLGEINKGETITMAPVVAKGKVIVGNSGGELGV--------RGWVTAL 177
Query: 158 DVRNGRIIWQTYML-PDNG---------------GKRGGYS----------GAAVWG--- 188
D G I W+ Y PD GK G + G +WG
Sbjct: 178 DENTGAIAWRAYATGPDKDVLIGDDFKPFYDSFKGKDLGVTSWPADRWRTGGGTMWGWVS 237
Query: 189 SSPAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYF 248
PA+++I N P + +Q ++++++I DIDSG WA + +D+F
Sbjct: 238 FDPALNMIFFGTAN---PSPWNANQRKGDNLWSSTIFGRDIDSGHAKWAYQVSPHDLF-- 292
Query: 249 TCLVPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
D D +L+ + +G+ R ++ ++G+ + DR +G++I
Sbjct: 293 ----------------DHDEINENVLVDLDIDGKTRKALIHPGRNGYMYVMDRTTGEVI 335
>gi|87200883|ref|YP_498140.1| Pyrrolo-quinoline quinone [Novosphingobium aromaticivorans DSM
12444]
gi|87136564|gb|ABD27306.1| Pyrrolo-quinoline quinone [Novosphingobium aromaticivorans DSM
12444]
Length = 705
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 80/348 (22%), Positives = 131/348 (37%), Gaps = 71/348 (20%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRW--SFYAGKDISATPAVANGVVYFPSWNG 58
WL++G D +R++ IN V L L W + ATP + +G +Y +
Sbjct: 47 WLSYGRDYGEQRFS-PLTQINDGNVGQLGLAWFHDLETARGQEATPLMHDGTLYISTAWS 105
Query: 59 YLYAVNAFNGALIWEQN---------------LSKLTGLSGTGIVVNVTVAVVVAVSRSN 103
+ A +A GAL W + +++ L G + V +VA+ +
Sbjct: 106 MVKAFDAKTGALKWSYDPEVPRETLVRACCDAVNRGVALYGDKVFVGTLDGRLVALDQKT 165
Query: 104 GELVWSTQIDPRPRS-QITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNG 162
G++VWS + P IT + V G +G E RG +A DV G
Sbjct: 166 GKVVWSKVVVPNQEDYTITGAPRVVKGKVLIGSGGSE--------YKARGYIAAYDVNTG 217
Query: 163 RIIWQTYMLPDNGG--------------------KRGGYSGAAVWGS---SPAIDVIRRQ 199
+W+ + +P N K GG G VW S PA +++
Sbjct: 218 NEVWKFHTVPGNPADGFENKAMENAARTWAGEWWKLGG--GGTVWDSITYDPATNLVLFG 275
Query: 200 KQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCP 259
N + P + S +Y +SIVA++ D+G W F T
Sbjct: 276 TGNAEPWNPAAAGREGDS-LYTSSIVAVNADTGDYVWH--------FQET---------- 316
Query: 260 PGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
P D D + L ++ +G+ R V++ K+G + D +G +
Sbjct: 317 PEDRWDFDSAQQITLADLTIDGQRRHVILHAPKNGHVYVLDARTGQFL 364
>gi|85375741|ref|YP_459803.1| alcohol dehydrogenase large subunit [Erythrobacter litoralis
HTCC2594]
gi|84788824|gb|ABC65006.1| Alcohol dehydrogenase large subunit [Erythrobacter litoralis
HTCC2594]
Length = 723
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 83/357 (23%), Positives = 135/357 (37%), Gaps = 79/357 (22%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAGKDIS----ATPAVANGVVYFPSW 56
W+ HG + +R++ +N TV L L W YA D + ATP V +G +Y +
Sbjct: 50 WITHGRTYSEQRFS-PLSQVNQETVGELGLAW--YADMDTARGQEATPLVMDGKLYLTTA 106
Query: 57 NGYLYAVNAFNGALIWEQN--LSKLTGLSGTGIVVNVTVAV-------------VVAVSR 101
+ A +A G +WE + + T + VVN +A +VA+ R
Sbjct: 107 WSKVKAFDAATGEPLWEYDPQVPGETAVKACCDVVNRGLAAWNDKLYLGTLDGRLVALDR 166
Query: 102 SNGELVWST-QIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVR 160
GE+ W +D +T + + G +G E + RG +A D
Sbjct: 167 DTGEVAWEKVTVDQSKAYTVTGAPRIIDGKVLIGNGGAEFGV--------RGYIAAYDAA 218
Query: 161 NGRIIWQTYMLPDNGGKRGGYS----------------------GAAVWGS---SPAIDV 195
+G +W+ Y +P+ + G VW S P +D+
Sbjct: 219 DGEELWRFYTVPEGTEDESSPAYLQEAAATWNTDVLASSDAIGGGGTVWDSMAYDPELDL 278
Query: 196 IRRQKQN----NQTTKPTHPDQCISSD-IYANSIVALDIDSGRIAWAKPLGGYDIFYFTC 250
+ N N+ + D D +Y +SIVA+ D+G W Y T
Sbjct: 279 LYIGVGNGSPWNRAYRSPGADGTGEGDNLYLSSIVAIRPDTGEYVW---------HYQTT 329
Query: 251 LVPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
PG D + +L + +GR R V++ K+GF + DR +G+ I
Sbjct: 330 ---------PGETWDYTATQHIILADLEIDGRERQVLMQAPKNGFFYVIDRATGEFI 377
>gi|40063498|gb|AAR38298.1| alcohol dehydrogenase, PQQ family [uncultured marine bacterium 581]
Length = 750
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 77/348 (22%), Positives = 131/348 (37%), Gaps = 68/348 (19%)
Query: 1 WLNHGGDLNNRRYAYGEVL--INPVTVRNLRLRW--SFYAGKDISATPAVANGVVYFPSW 56
WL GGD R AY L IN V L W + ATP + +GV+Y
Sbjct: 56 WLTGGGDY---RQAYFSPLKHINRSNVTELGYAWHIDLPSEHGYEATPLMVDGVLYGSGP 112
Query: 57 NGYLYAVNAFNGALIWEQN---------------LSKLTGLSGTGIVVNVTVAVVVAVSR 101
G +AV+A NG +W+ N +++ LSG + V + A+ +
Sbjct: 113 QGIAFAVDASNGRSLWQFNPEIDPQFMRKVCCGVVNRGVALSGETVFVAALDGHLFALDK 172
Query: 102 SNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRN 161
+G +VW + T++G+ Y+ V + + A RG + D
Sbjct: 173 IDGTVVWRADTFMDRKRGYTITGAPYIAGDLVIIGNAGAEFDA------RGYITAYDRHT 226
Query: 162 GRIIWQTYMLPDNGGKRGGYS-------------------GAAVWGS---SPAIDVIRRQ 199
G W+ + +P++ + G VW + P ++++
Sbjct: 227 GEQRWRFFTVPNSPNPPFEHPELEVAAATWDPDSLWQVGLGGTVWDAMAFDPQLNLLYVG 286
Query: 200 KQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCP 259
N ++Y SI+A++ D GR+ W Y T
Sbjct: 287 TGNAAPYPRKLRSPVGGDNLYLASILAINPDDGRLVW---------HYQTT--------- 328
Query: 260 PGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
PG N D + +L ++ G+ R V++ K+GF + DR +G++I
Sbjct: 329 PGDNWDFTATQKMILADLTIEGKSRQVLMQAPKNGFFYVLDRVTGELI 376
>gi|384221026|ref|YP_005612192.1| hypothetical protein BJ6T_73570 [Bradyrhizobium japonicum USDA 6]
gi|354959925|dbj|BAL12604.1| hypothetical protein BJ6T_73570 [Bradyrhizobium japonicum USDA 6]
Length = 549
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 79/331 (23%), Positives = 127/331 (38%), Gaps = 70/331 (21%)
Query: 20 INPVTVRNLRLRWSF--YAGKDISATPAVANGVVYFPS-WNGYLYAVNAFNGALIWEQN- 75
IN VR+L L WS+ + + I ATP V +G++Y + WN ++A++A G IW +
Sbjct: 96 INTDNVRDLGLVWSYNLESSRGIEATPLVVDGIMYQSAPWN-VVHAIDARTGTKIWSFDP 154
Query: 76 --------------LSKLTGLSGTGIVVNVTVAVVVAVSRSNGELVWSTQ--IDPRPRSQ 119
+S+ L + V ++A+ + G +W T ID
Sbjct: 155 GVDRSKTYRGCCDAVSRGLALYKGKVFVAAYDGRLIALDATTGAKLWETDTLIDHEHSYT 214
Query: 120 ITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNGGK-- 177
IT + V+ G +G S E + RG + D G +W+ + +P + K
Sbjct: 215 ITGAPRVFNGKVVIGQSGAEYGV--------RGYVTAYDSETGHQLWRWFTVPGDPSKPF 266
Query: 178 --------------RGGY----SGAAVWGS---SPAIDVIRRQKQNNQTTKPTHPDQCIS 216
G Y G A W S P ++++ N
Sbjct: 267 EDASMEAAAKTWDPSGKYWINGGGGAPWDSITFDPDLNMVYVGTGNGGPWNRKLRSPSGG 326
Query: 217 SDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLT 276
++Y SIVAL+ D+GR W + PG N D + +L
Sbjct: 327 DNLYLGSIVALNADTGRYIW------------------HYQETPGDNWDYTSTQPMILAD 368
Query: 277 ISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
I +G R V++ K+GF + DR +G I
Sbjct: 369 IKIDGAPRKVILHAPKNGFFFVIDRTNGKFI 399
>gi|119504075|ref|ZP_01626156.1| Pyrrolo-quinoline quinone [marine gamma proteobacterium HTCC2080]
gi|119460078|gb|EAW41172.1| Pyrrolo-quinoline quinone [marine gamma proteobacterium HTCC2080]
Length = 750
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 77/348 (22%), Positives = 131/348 (37%), Gaps = 68/348 (19%)
Query: 1 WLNHGGDLNNRRYAYGEVL--INPVTVRNLRLRW--SFYAGKDISATPAVANGVVYFPSW 56
WL GGD R AY L IN V L W + ATP + +GV+Y
Sbjct: 56 WLTGGGDY---RQAYFSPLKHINRSNVTELGYAWHIDLPSEHGYEATPLMVDGVLYGSGP 112
Query: 57 NGYLYAVNAFNGALIWEQN---------------LSKLTGLSGTGIVVNVTVAVVVAVSR 101
G +AV+A NG +W+ N +++ LSG + V + A+ +
Sbjct: 113 QGIAFAVDASNGRSLWQFNPEIDPQFMRKVCCGVVNRGVALSGETVFVAALDGHLFALDK 172
Query: 102 SNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRN 161
+G +VW + T++G+ Y+ V + + A RG + D
Sbjct: 173 IDGTVVWRADTFMDRKRGYTITGAPYIAGDLVIIGNAGAEFDA------RGYITAYDRHT 226
Query: 162 GRIIWQTYMLPDNGGKRGGYS-------------------GAAVWGS---SPAIDVIRRQ 199
G W+ + +P++ + G VW + P ++++
Sbjct: 227 GEQRWRFFTVPNSPNPPFEHPELEVAAATWDPDSLWQVGLGGTVWDAMAFDPQLNLLYVG 286
Query: 200 KQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCP 259
N ++Y SI+A++ D GR+ W Y T
Sbjct: 287 TGNAAPYPRKLRSPVGGDNLYLASILAINPDDGRLVW---------HYQTT--------- 328
Query: 260 PGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
PG N D + +L ++ G+ R V++ K+GF + DR +G++I
Sbjct: 329 PGDNWDFTATQKMILADLTIEGKSRQVLMQAPKNGFFYVLDRVTGELI 376
>gi|149184924|ref|ZP_01863241.1| Alcohol dehydrogenase large subunit [Erythrobacter sp. SD-21]
gi|148831035|gb|EDL49469.1| Alcohol dehydrogenase large subunit [Erythrobacter sp. SD-21]
Length = 696
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 80/354 (22%), Positives = 133/354 (37%), Gaps = 74/354 (20%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRW--SFYAGKDISATPAVANGVVYFPSWNG 58
W++HG + +R++ + +N TV L L W + ATP V +G +Y S
Sbjct: 21 WISHGRTYSEQRFSPLD-QVNRETVSRLGLTWFADMDTARGQEATPLVMDGKLYVTSAWS 79
Query: 59 YLYAVNAFNGALIW--EQNLSKLTGLSGTGIVVNVTVAV-------------VVAVSRSN 103
++A +A G +W + + TG+ VVN +A +VA+ R
Sbjct: 80 KVFAFDAATGEALWSYDPQVPGETGVKACCDVVNRGLAAWGDTLFLGTLDGRLVALDRDT 139
Query: 104 GELVWST-QIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNG 162
G + W +D IT + V G +G E + RG +A D +G
Sbjct: 140 GAVEWEKVTVDQSKSYTITGAPRVIDGKVLIGNGGAEFGV--------RGYIAAYDAASG 191
Query: 163 RIIWQTYMLPDNGGK---------------------RGGYSGAAVWGS---SPAIDVI-- 196
+W+ Y +P + G+ G G VW S P +D++
Sbjct: 192 DELWRFYTVPGDEGEDAPEYLKTAAETWSGDVLTSESGIGGGGTVWDSMAYDPELDLLYF 251
Query: 197 ---RRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVP 253
N P ++Y +SIVA+ D+G W Y T
Sbjct: 252 GVGNGSPWNRAYRSPGANGTGEGDNLYLSSIVAIRPDTGEYVW---------HYQTT--- 299
Query: 254 NNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
PG D + +L + +GR R V++ K+G+ + DR +G+ +
Sbjct: 300 ------PGETWDYTATQHIILADMEIDGRTRQVLMQAPKNGYFYVLDRATGEFL 347
>gi|414167276|ref|ZP_11423505.1| quinohemoprotein ethanol dehydrogenase type-1 [Afipia
clevelandensis ATCC 49720]
gi|410891093|gb|EKS38891.1| quinohemoprotein ethanol dehydrogenase type-1 [Afipia
clevelandensis ATCC 49720]
Length = 725
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 79/349 (22%), Positives = 133/349 (38%), Gaps = 69/349 (19%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSF--YAGKDISATPAVANGVVYFPSWNG 58
W G DL R++ + IN V+NL L WS+ + + + ATP V +G++Y +
Sbjct: 77 WPAVGLDLGETRFSRLK-QINTDNVKNLGLVWSYNLESSRGVEATPVVVDGIMYVTASWS 135
Query: 59 YLYAVNAFNGALIW--EQNLSKLTGLSGTGIVVNVTVAV-------------VVAVSRSN 103
++A++ G IW + + + G G VVN VA+ ++A+
Sbjct: 136 VVHAIDVRTGKKIWTYDPEVPRTIGYKGCCDVVNRGVALHKGKVFVGAYDGRLIALDAVT 195
Query: 104 GELVWS--TQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRN 161
G+ VW T +D IT + V G +G E RG + D
Sbjct: 196 GKKVWEKDTLLDKEHSYTITGAPRVVNGKVVIGNGGAEYGA--------RGYVTAYDAET 247
Query: 162 GRIIWQTYMLPDNGGK----------------RGGY----SGAAVWGS---SPAIDVIRR 198
G W+ +++P + K G Y G W + P ++++
Sbjct: 248 GNQAWRWFIVPGDPSKPYEDESMEKAAKTWDPAGKYWVNGGGGTAWDTITFDPELNLVYI 307
Query: 199 QKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDC 258
N ++Y SIVAL+ D+G+ W +
Sbjct: 308 GTGNGSPWNRHLRSPAGGDNLYLASIVALNADTGKYVW------------------HYQE 349
Query: 259 PPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
PG + D + +L I+ +G R V++ K+GF + DR +G I
Sbjct: 350 TPGDHWDYTSTQPMILADINIDGAPRKVILHAPKNGFFFVIDRTNGKFI 398
>gi|421870360|ref|ZP_16301992.1| Quino(hemo)protein alcohol dehydrogenase,PQQ-dependent
[Burkholderia cenocepacia H111]
gi|358069266|emb|CCE52870.1| Quino(hemo)protein alcohol dehydrogenase,PQQ-dependent
[Burkholderia cenocepacia H111]
Length = 573
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 72/317 (22%), Positives = 120/317 (37%), Gaps = 54/317 (17%)
Query: 20 INPVTVRNLRLRWSFYAGKDI----SATPAVANGVVYFPSWNGYLYAVNAFNGALIW--E 73
I+ ++L+ W++ D+ ATP V ++ + +YA +A G +W E
Sbjct: 70 IDASNAKDLKQVWAYKFPADLKQGFEATPIVNGNYLFVTTPKDNVYAFDAKTGKQLWKYE 129
Query: 74 QNLSKLTGLSGTGIVVNVTVAV-------------VVAVSRSNGELVWSTQI-DPRPRSQ 119
L + + VVN VA+ V A+ G LVW Q+ +P
Sbjct: 130 PKLGAASFKTACCDVVNRGVALYGKNVYIAMLNGEVAALDAQTGNLVWKKQMFEPGLGYA 189
Query: 120 ITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNGGK-- 177
+++ GA VG S E + RG +A L+ +G +W+ Y +P G K
Sbjct: 190 FSLAPLAIDGAIVVGTSGGEYGI--------RGYIAALNPEDGSQVWKRYTIPAAGEKGA 241
Query: 178 ------RGGYSGAAVWGSSPAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDS 231
+ G A W + R P ++Y++S++ALD S
Sbjct: 242 ETWPDGMQSHGGGAAWLTGTYDAASRTLYWGVGNPGPWLAALRPGDNLYSDSLLALDAKS 301
Query: 232 GRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQ 291
G + W D + D D A +L I G+ D ++
Sbjct: 302 GNLKWHYQYTNNDTW------------------DYDGVNAAVLADIKYKGKDYDAIIHAD 343
Query: 292 KSGFAWAFDRDSGDIIW 308
++GF A DR +G +I+
Sbjct: 344 RNGFFHAIDRTTGKLIY 360
>gi|171913354|ref|ZP_02928824.1| Quinoprotein glucose dehydrogenase [Verrucomicrobium spinosum DSM
4136]
Length = 723
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 83/343 (24%), Positives = 131/343 (38%), Gaps = 61/343 (17%)
Query: 1 WLNHGGDLNNRRYAYGEV-LINPVTVRNLRLRWSFYAGK--DISATPAVANGVVYFPSWN 57
W + GD +R Y + IN V L++ W + G + A + NGV+Y P+
Sbjct: 42 WTTYLGD--KQRSLYSPLNQINQQNVAQLKVAWMYDTGDKGEYQANNLIVNGVLYTPTPT 99
Query: 58 GYLYAVNAFNGALIWEQNLSKLTGLSGTGIVVNVTVAVVVAVSRSNGELVWSTQI----- 112
+ A+NA GA +W+ + + T +SG G +V + GE T +
Sbjct: 100 RKVVALNAATGAELWKWDPA--TSVSGAG--KGRQRGMVFWQNEEGGEQRLFTAVGNYLF 155
Query: 113 --DPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTF---------------RGSLA 155
D R I G G F++G E P T G++
Sbjct: 156 ALDVRTGQLIKSFGK--DGTFHLGSGLDTEGTPNIGLNTPGVIYKNLLILGGVGGPGAVR 213
Query: 156 KLDVRNGRIIWQTYMLPDNGGKRGGYSGAAVWGSSPAIDVIRRQKQNNQ------TTKPT 209
+DVR G W +++P G A W ++ + Q + TK
Sbjct: 214 AIDVRTGERKWIFHLIPRPGEVGHDTWPADSWKTATGVMPWPGQSLDEARGIVYIATKTA 273
Query: 210 HPD----QCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLD 265
PD +++ANS+VAL D+G W + +D+ LD
Sbjct: 274 EPDFYGGNRHGQNLFANSLVALKADTGERLWHFQIVHHDL------------------LD 315
Query: 266 ADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDIIW 308
D P+LLT++ G+ D V K G + FDR +G+ +W
Sbjct: 316 KDLPCPPVLLTVTHKGKKVDAVAQGTKHGLLFVFDRVTGEPLW 358
>gi|323494781|ref|ZP_08099880.1| methanol/ethanol family PQQ-dependent dehydrogenase [Vibrio
brasiliensis LMG 20546]
gi|323310974|gb|EGA64139.1| methanol/ethanol family PQQ-dependent dehydrogenase [Vibrio
brasiliensis LMG 20546]
Length = 591
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 72/351 (20%), Positives = 135/351 (38%), Gaps = 75/351 (21%)
Query: 2 LNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAG----KDISATPAVANGVVYFPSWN 57
+++G L +RY+ IN TV +R W+F G + + P + +GV+Y
Sbjct: 47 VSYGLGLKGQRYS-PLTTINTDTVDEMRPAWAFSLGGEKQRGQESQPLIKDGVMYITGSY 105
Query: 58 GYLYAVNAFNGALIWEQN-------------LSKLTGLSGTGIVVNVTVAVVVAVSRSNG 104
+YA++A G +W+ + +++ L G ++ A +VA+++ G
Sbjct: 106 SRMYAIDARTGEELWQYDARLPDGIMPCCDVINRGAALYGDLVIFGTLDAKLVALNKDTG 165
Query: 105 ELVWSTQI-DPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGR 163
+ VW ++ D + IT + V G G+S E + G + D +NG+
Sbjct: 166 KTVWKKKVADYKEGYSITAAPIVVKGKVITGISGGEFGV--------VGRVTAFDAKNGQ 217
Query: 164 IIWQT--------YMLPDNGGKRGGYSGAA--------VWGS-----------SPAIDVI 196
++W+ Y+ D G SG +W S P +D++
Sbjct: 218 LVWERPTVEGHMGYIWKDGKKTENGISGGKPGQTWPGDLWKSGGAAPWLGGTYDPEVDLL 277
Query: 197 RRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNP 256
N P + + +++S +A+D D+G+I W +F
Sbjct: 278 FFGTGN---PAPWNSHLRPGDNYFSSSRLAIDPDTGKIVW----------HFQTT----- 319
Query: 257 DCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
P D D + NG+ ++GF + +R++GD I
Sbjct: 320 ---PNDGWDYDGVNELISFNYQENGKTVKAAATADRNGFFYVLNRENGDFI 367
>gi|338974960|ref|ZP_08630315.1| quino(hemo)protein alcohol dehydrogenase [Bradyrhizobiaceae
bacterium SG-6C]
gi|338231559|gb|EGP06694.1| quino(hemo)protein alcohol dehydrogenase [Bradyrhizobiaceae
bacterium SG-6C]
Length = 725
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 79/349 (22%), Positives = 133/349 (38%), Gaps = 69/349 (19%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSF--YAGKDISATPAVANGVVYFPSWNG 58
W G DL R++ + IN V+NL L WS+ + + + ATP V +G++Y +
Sbjct: 77 WPAVGLDLGETRFSRLK-QINTDNVKNLGLVWSYNLESSRGVEATPVVVDGIMYVTASWS 135
Query: 59 YLYAVNAFNGALIW--EQNLSKLTGLSGTGIVVNVTVAV-------------VVAVSRSN 103
++A++ G IW + + + G G VVN VA+ ++A+
Sbjct: 136 VVHAIDVRTGKKIWTYDPEVPRTIGYKGCCDVVNRGVALHKGKVFVGAYDGRLIALDAVT 195
Query: 104 GELVWS--TQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRN 161
G+ VW T +D IT + V G +G E RG + D
Sbjct: 196 GKKVWEKDTLLDKEHSYTITGAPRVVNGKVVIGNGGAEYGA--------RGYVTAYDAET 247
Query: 162 GRIIWQTYMLPDNGGK----------------RGGY----SGAAVWGS---SPAIDVIRR 198
G W+ +++P + K G Y G W + P ++++
Sbjct: 248 GNQAWRWFIVPGDPSKPYEDESMEKAAKTWDPAGKYWVNGGGGTAWDTITFDPELNLVYI 307
Query: 199 QKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDC 258
N ++Y SIVAL+ D+G+ W +
Sbjct: 308 GTGNGSPWNRHLRSPAGGDNLYLASIVALNADTGKYVW------------------HYQE 349
Query: 259 PPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
PG + D + +L I+ +G R V++ K+GF + DR +G I
Sbjct: 350 TPGDHWDYTSTQPMILADINIDGAPRKVILHAPKNGFFFVIDRTNGKFI 398
>gi|402824538|ref|ZP_10873895.1| alcohol dehydrogenase [Sphingomonas sp. LH128]
gi|402261943|gb|EJU11949.1| alcohol dehydrogenase [Sphingomonas sp. LH128]
Length = 719
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 72/350 (20%), Positives = 130/350 (37%), Gaps = 69/350 (19%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAGKDISAT-PAVANGVVYFPSWNGY 59
W N+G ++Y+ + IN TV +L+L W + S + P +G ++ + + Y
Sbjct: 48 WPNYGRTPGQQQYSPLD-QINADTVGDLKLAWHYDLQPGFSVSEPIEVDGKLFVTTGHAY 106
Query: 60 LYAVNAFNGALIWE---QNLSKLTGLSGTG------------IVVNVTVAVVVAVSRSNG 104
+ A++A G ++WE + + T G + + T V+A+ + G
Sbjct: 107 ITALDATTGKVLWEYDSKTRERATSALHMGWGNKGLAYYKGRVFIATTDGFVIALDANTG 166
Query: 105 ELVWST-QIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGR 163
+ VW Q + + V+ G +G + RG ++ D G+
Sbjct: 167 KEVWKQRQFEANELRNVNGPPRVFNGKVIIGHGGAD-------ISPIRGYVSAYDAMTGK 219
Query: 164 IIWQTYMLPDN------------------------GGKRGGYSGAA--VWGSSPAIDVIR 197
+ W+ Y +P + KR G G A + P +++I
Sbjct: 220 LAWRFYTVPSDPSKPAESKADAVARPTWKGDWYGTDAKRVGGGGTAWNAFSYDPELNLIY 279
Query: 198 RQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPD 257
N +++ SIVA+D ++G W Y C
Sbjct: 280 IGVGNGFPYAQAKRSPGGGDNLFLASIVAVDANTGEYKW---------HYQVC------- 323
Query: 258 CPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
PG D + L TI +G+ R V++ K+GF + DR +G+ I
Sbjct: 324 --PGEQWDCTATQDMTLATIEIDGKPRKVIMQAPKNGFFYVLDRKTGEFI 371
>gi|427409203|ref|ZP_18899405.1| methanol/ethanol family PQQ-dependent dehydrogenase [Sphingobium
yanoikuyae ATCC 51230]
gi|425711336|gb|EKU74351.1| methanol/ethanol family PQQ-dependent dehydrogenase [Sphingobium
yanoikuyae ATCC 51230]
Length = 695
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 74/329 (22%), Positives = 128/329 (38%), Gaps = 68/329 (20%)
Query: 20 INPVTVRNLRLRWSFYAGKDIS--ATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQN-- 75
IN +R L L WS ++S ATP NG++YF G +YAV+ +G LIW+ +
Sbjct: 57 INTANIRKLGLAWSLDLEGEVSLEATPLAVNGILYFSGSYGAVYAVDGASGRLIWKYDPE 116
Query: 76 --------------LSKLTGLSGTGIVVNVTVAVVVAVSRSNGELVWSTQIDPRPRSQIT 121
+++ I + V ++A+ G + WS P P + +
Sbjct: 117 IWKVNPTRQAMGMGVNRGVAYDNGRIFIGVLDGRLIALDARTGAVAWSVNTLP-PGTMHS 175
Query: 122 MSGS--VYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYMLP----DNG 175
++G+ + G +G + RG + D + G +W+ + +P N
Sbjct: 176 LTGAPRTFNGKVIIGNGGAD--------IGQRGFVTAYDQKTGAQVWRFWTVPGSPEQNA 227
Query: 176 GK----------RGGY----SGAAVWGSSPAIDVIRRQKQNNQTTKPTHPDQCI---SSD 218
G G Y +G VW + R P P++ +
Sbjct: 228 GDPVMEMAAKSWNGSYWKTGTGGTVWNGMTFDSELNRIYLGVGNAGPYDPEKRSPGGGDN 287
Query: 219 IYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTIS 278
++ SIVALD DSG+ W ++ + D N+ A T++
Sbjct: 288 LFVASIVALDADSGQYIW----------HYQQNPRESWDYKATANMIA--------ATVT 329
Query: 279 TNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
+GR R V++ +GF + DR++G +I
Sbjct: 330 IDGRPRKVLMQQPTNGFFYVLDRETGKLI 358
>gi|114707803|ref|ZP_01440697.1| putative pqq dehydrogenase protein [Fulvimarina pelagi HTCC2506]
gi|114536792|gb|EAU39922.1| putative pqq dehydrogenase protein [Fulvimarina pelagi HTCC2506]
Length = 643
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 83/355 (23%), Positives = 131/355 (36%), Gaps = 78/355 (21%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAG--KDISATPAVANGVVYFPS-WN 57
W+ G + RY+ + IN + NL+L W+F G + + P V +G++Y S W
Sbjct: 32 WVMPGKNYAGTRYSELD-QINADNIGNLQLAWTFSNGVNRGQESIPLVVDGMMYIVSPWP 90
Query: 58 GYLYAVNAFNGALIWEQNLSKLTGLSGTG---------------IVVNVTVAVVVAVSRS 102
L+A++A G L W G ++ N VAV
Sbjct: 91 NNLFALDATTGDLKWTFEPPTARAAQGVACCDVVNRGATYADGKVIYNTLDNHTVAVDAK 150
Query: 103 NGELVWSTQIDPRPRSQ-ITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRN 161
GELVW +++ + +TM+ V VG S E + RG + LDV
Sbjct: 151 TGELVWRSKLGEISNGETMTMAPLVVKDKVLVGNSGGEMGV--------RGWMTALDVGT 202
Query: 162 GRIIWQTYMLPDNG----------------GKRGGYS----------GAAVWG---SSPA 192
G I W+ + G+ G S G WG P
Sbjct: 203 GEIAWRAMHTGTDDEVLIGEDFKAPYAWMEGQDLGVSTWPKDRWRTGGGTAWGWITYDPE 262
Query: 193 IDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLV 252
+D+I N P + +Q +++ +I A D D+G+ WA +D++
Sbjct: 263 LDLIYYGTGN---PGPWNSNQREGDNLWTATIFARDPDTGQAKWAYQTSPHDLW------ 313
Query: 253 PNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
D D MLL + G + V V ++GF + DR +G +I
Sbjct: 314 ------------DHDGINEVMLLDLEIEGDTQQVAVRPGRNGFMYVLDRATGKVI 356
>gi|73541155|ref|YP_295675.1| Pyrrolo-quinoline quinone [Ralstonia eutropha JMP134]
gi|72118568|gb|AAZ60831.1| Pyrrolo-quinoline quinone [Ralstonia eutropha JMP134]
Length = 718
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 79/349 (22%), Positives = 135/349 (38%), Gaps = 69/349 (19%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSF--YAGKDISATPAVANGVVYFPSWNG 58
W +G D R++ + I+ V++L L WS+ + + + ATP V +GV+Y +
Sbjct: 69 WPTYGLDYAETRFSKLD-QIHAGNVKDLGLVWSYNLESTRGVEATPLVVDGVMYVSAPWS 127
Query: 59 YLYAVNAFNGALIW--EQNLSKLTGLSGTGIVVNVTVAV-------------VVAVSRSN 103
++A+N G +W + + + G VVN VA+ +VA+ +
Sbjct: 128 VVHAINVRTGKTLWTYDPKVPRDQAYKGCCDVVNRGVALYKGKVFVGSFDGRLVAIDAAT 187
Query: 104 GELVWS--TQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRN 161
G+ VW T D IT + VY G +G E + RG + D
Sbjct: 188 GKKVWEQDTIADRSHSYTITGAPRVYKGKVIIGNGGAEYGV--------RGYITAYDAET 239
Query: 162 GRIIWQTYMLPDNGGK----------------RGGY----SGAAVWGS---SPAIDVIRR 198
G+ W+ + +P + K G Y G VW + P ++++
Sbjct: 240 GKQQWRWFTVPGDPSKPFENDAMAKAAATWDPAGKYWVNGGGGTVWNTMAFDPDLNLMYI 299
Query: 199 QKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDC 258
N ++YA S+VAL+ D+G W +
Sbjct: 300 GTGNAGPWSRKARSPGGGDNLYAASVVALNPDTGEYVW------------------HYQE 341
Query: 259 PPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
PG N D + +L + +G+ R V++ K+GF + DR +G I
Sbjct: 342 TPGDNWDYTSTQDIILADLPIDGQPRKVILHAPKNGFFFVIDRTNGKFI 390
>gi|410692470|ref|YP_003623091.1| putative Quinonprotein methanol dehydrogenase [Thiomonas sp. 3As]
gi|294338894|emb|CAZ87231.1| putative Quinonprotein methanol dehydrogenase [Thiomonas sp. 3As]
Length = 572
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 71/320 (22%), Positives = 128/320 (40%), Gaps = 56/320 (17%)
Query: 20 INPVTVRNLRLRWSFYAGKDIS----ATPAVANGVVYFPSWNGYLYAVNAFNGALIW--E 73
I+P V+NL++ WS D++ ATP V ++ + ++YA +A G +W +
Sbjct: 68 IDPRNVKNLKMVWSHKFPADLTQGFEATPIVNGNFMFVTTPKDHVYAFDATTGKKLWSYD 127
Query: 74 QNLSKLTGLSGTGIVVNVTVAV-------------VVAVSRSNGELVWSTQI-DPRPRSQ 119
L ++ + VVN VA+ V + + +G++ W Q+ DP
Sbjct: 128 PQLPQIAYKTVCCDVVNRGVALYKDSLYVAMLSGEVASFNAQDGQINWKKQLFDPGIGYA 187
Query: 120 ITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNGGKRG 179
+++ G YVG + E RG +A LD G +W+ Y +P K G
Sbjct: 188 FSLAPLAANGNIYVGSAGGEYGA--------RGFIAALDAHTGDTVWKKYTVPSPDEKYG 239
Query: 180 GY--SGAAVWGSSPAIDVIRRQKQNNQTTK-------PTHPDQCISSDIYANSIVALDID 230
G SPA + NQT P + ++Y++S++A++
Sbjct: 240 DTWPKGMYTHSGSPAW-LTGTYDPENQTLYWGVGNPGPWLAELRPGKNLYSDSLLAINAG 298
Query: 231 SGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAV 290
+G I W +D + D D + I+ G+ D ++
Sbjct: 299 NGDIKWHFQYTQHD------------------SWDYDGVNTAIRAKINYQGKEYDALIHA 340
Query: 291 QKSGFAWAFDRDSGDIIWFK 310
++G+ A D+ +G +I+ K
Sbjct: 341 DRNGYFIALDQKTGKLIYAK 360
>gi|255038701|ref|YP_003089322.1| Pyrrolo-quinoline quinone [Dyadobacter fermentans DSM 18053]
gi|254951457|gb|ACT96157.1| Pyrrolo-quinoline quinone [Dyadobacter fermentans DSM 18053]
Length = 698
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 84/353 (23%), Positives = 131/353 (37%), Gaps = 74/353 (20%)
Query: 1 WLNHGGDLNNRRY-AYGEVLINPVTVRNLRLRWSFYAG--------KDISATPAVANGVV 51
W + GD Y A G++ + VT L++ W++ +G + P V +G++
Sbjct: 29 WPEYNGDGARSHYSALGQITKDNVT--QLQVAWTYASGGADTNRNRTQMQCNPIVVDGIL 86
Query: 52 YFPSWNGYLYAVNAFNGALIWEQNLSKLTGLSGTGIVV--------------NVTVAVVV 97
Y S +AVNA G IW+ NL G G+ A+
Sbjct: 87 YGVSAGIQAFAVNAATGEEIWKTNLKDNAGTLSRGVTYWSEGNEKRIFFGAGKYIYALNA 146
Query: 98 AVSRSNGELVWSTQID-------PRPRSQITMS--GSVYMGAFYVGLSSLEEALPADQCC 148
A S S +ID P IT + ++Y G E
Sbjct: 147 ADGSSISTFGVSGRIDLRIGIGRPGADDYITSNTPNTIYKNLLITGARVNENE------T 200
Query: 149 TFRGSLAKLDVRNGRIIWQTYMLPDNG---------GKRGGYSGAAVWGSSPAIDVIRRQ 199
G + DVR G+++W +P G R + GA W AID RR+
Sbjct: 201 ALLGDVRAYDVRTGKVVWTFNTIPAPGEYGSETWPANAREHFGGANAWAGM-AID--RRR 257
Query: 200 KQNNQTTKPTHPD----QCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNN 255
T D +++AN ++ALD +G+ W L +DI+ +
Sbjct: 258 GIVYIPTGSAAYDFYGGNRPGDNLFANCLIALDAATGKRLWHYQLVHHDIW------DRD 311
Query: 256 PDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDIIW 308
P CPP L+T++ G+ D VV V K G+ + DR +G ++
Sbjct: 312 PPCPPN------------LVTVTHKGKPVDAVVQVTKQGYVFVLDRATGKPLF 352
>gi|91791109|ref|YP_552059.1| Pyrrolo-quinoline quinone [Polaromonas sp. JS666]
gi|91700990|gb|ABE47161.1| Pyrrolo-quinoline quinone [Polaromonas sp. JS666]
Length = 721
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 75/349 (21%), Positives = 136/349 (38%), Gaps = 69/349 (19%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSF--YAGKDISATPAVANGVVYFPSWNG 58
W + G D R++ + +N V+++ L WS+ + + + ATP V +G++Y +
Sbjct: 73 WPSTGLDYAETRFSKLD-QVNASNVKDMGLVWSYNLESTRGVEATPLVVDGIMYVTASWS 131
Query: 59 YLYAVNAFNGALIW--EQNLSKLTGLSGTGIVVNVTVAV-------------VVAVSRSN 103
++AV+ G IW + + + G G VVN VA+ ++A+ ++
Sbjct: 132 IVHAVDVRTGKRIWTYDPKIKREFGYKGCCDVVNRGVALHKGRVYVAAFDGRLIALDAAS 191
Query: 104 GELVWS--TQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRN 161
G++ W T ID T + ++ +G E + RG + D +
Sbjct: 192 GKVAWEQDTVIDHSRSYTSTGAPRIFKDKVIIGNGGAEYGV--------RGYITAYDAAS 243
Query: 162 GRIIWQTYMLPDNGGK----------------RGGY----SGAAVWGS---SPAIDVIRR 198
G+ W+ + +P + K G Y G W S PA++++
Sbjct: 244 GKQKWRWFTVPGDPSKPFEDASMAAAAKTWDPSGKYWEAGGGGTAWDSMAFDPALNLMYV 303
Query: 199 QKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDC 258
N ++Y SIVAL+ D+G+ W +
Sbjct: 304 GTGNGSPWSRAKRSPAGGDNLYLASIVALNPDTGKYVW------------------HYQE 345
Query: 259 PPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
PG N D + +L + G+ R V++ K+GF + DR +G I
Sbjct: 346 TPGDNWDYTSTQPMILADLKIEGKPRKVILHAPKNGFFFVIDRTNGKFI 394
>gi|389872731|ref|YP_006380150.1| Pyrrolo-quinoline quinone [Advenella kashmirensis WT001]
gi|388537980|gb|AFK63168.1| Pyrrolo-quinoline quinone [Advenella kashmirensis WT001]
Length = 615
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 79/359 (22%), Positives = 145/359 (40%), Gaps = 82/359 (22%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAG--KDISATPAVANGVVYFPS-WN 57
W GD N+RY+ + IN V+NL++ W+F G + P V V+Y S +
Sbjct: 39 WAVQAGDFANQRYSKLD-QINKDNVKNLQVAWTFSTGVLRGHEGGPLVIGDVMYVHSPFP 97
Query: 58 GYLYAVNAFNGALIWE----QNLSKLT---------GLS-GTG-IVVNVTVAVVVAVSRS 102
+YA++ + +L+W+ Q+ + +T GL+ G G I++ +VA+
Sbjct: 98 NKVYAISLKDQSLLWKYEPTQDPNVITIMCCDTVNRGLAFGDGKIILQQADTTMVALDAK 157
Query: 103 NGELVWSTQI-DPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRN 161
G+ VW + D + T + ++ G+S E + RG L ++++
Sbjct: 158 TGKEVWKVKNGDFKVGESNTNAPHIFKDKVITGISGGEFGV--------RGRLIAYNLKD 209
Query: 162 GRIIWQTYML-PDN-----------------------------GGKRGGYSGAAVWG--- 188
G+ W+ Y PDN G + G WG
Sbjct: 210 GKEAWKAYSTGPDNEMLFDPEKTMTWTDGKMAAVGKDSSLKSWKGDQWKIGGGTTWGWFS 269
Query: 189 SSPAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYF 248
PA++++ N T P+ Q + ++ SI+A D+D+G W + +D + +
Sbjct: 270 YDPALNLVYYGTGNPGTWNPS---QRPGDNKWSMSIIARDLDTGVAKWVYQMTPHDEWDY 326
Query: 249 TCLVPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
+ N +L I G+ R +V ++GF + DR+SG+++
Sbjct: 327 DGVNEN------------------ILADIKVGGKDRKALVHFDRNGFGYTLDRESGELL 367
>gi|344940187|ref|ZP_08779475.1| PQQ-dependent dehydrogenase, methanol/ethanol family [Methylobacter
tundripaludum SV96]
gi|344261379|gb|EGW21650.1| PQQ-dependent dehydrogenase, methanol/ethanol family [Methylobacter
tundripaludum SV96]
Length = 618
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 81/363 (22%), Positives = 134/363 (36%), Gaps = 89/363 (24%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAG--KDISATPAVANGVVY----FP 54
W GGD RY+ IN V+NL+ WSF G + P V N V+Y FP
Sbjct: 40 WATWGGDYAGTRYSKLSE-INATNVKNLQPAWSFSTGVLRGHEGGPLVVNDVLYIHTPFP 98
Query: 55 SWNGYLYAVNAFNGALIWEQNLSKLTGLS---------------GTG-IVVNVTVAVVVA 98
+ +YA++ ++IWE ++ ++ G G I + + V+ A
Sbjct: 99 N---TVYAIDQKTQSVIWEFTPTQDADVTIPVMCCDTVNRGLAYGDGKIFLQQSDTVLTA 155
Query: 99 VSRSNGELVWSTQI-DPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKL 157
+ G+ VWS Q DP+ T + V G+S E + RG LA
Sbjct: 156 LDAKTGKRVWSVQNGDPKLGMTNTAAPLVVKDKVLTGISGGEFGV--------RGFLAAY 207
Query: 158 DVRNGRIIWQTY-MLPDNG-----------------------------GKRGGYSGAAVW 187
D+ G + W+ Y M PD G + G W
Sbjct: 208 DINTGELAWKGYSMGPDKDTLIDAKKTTTWKDGKVTPVGENSSLSTWEGDQWKIGGGTTW 267
Query: 188 G---SSPAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYD 244
G P +++I N T P Q + ++ S+ A D D+G + W + +D
Sbjct: 268 GWTSYDPKLNLIYYGSGNPSTWNPV---QRPGDNKWSMSLWARDADTGAVKWVYQMTPHD 324
Query: 245 IFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSG 304
+ F + +L+ G+ +V ++GF + DR++G
Sbjct: 325 EWDFDGI------------------NETVLVDQDVKGKMHKTIVHFDRNGFGYTLDRETG 366
Query: 305 DII 307
+++
Sbjct: 367 ELL 369
>gi|71274470|ref|ZP_00650758.1| quinoprotein [Xylella fastidiosa Dixon]
gi|71164202|gb|EAO13916.1| quinoprotein [Xylella fastidiosa Dixon]
gi|71731826|gb|EAO33884.1| quinoprotein [Xylella fastidiosa Ann-1]
Length = 414
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 94/220 (42%), Gaps = 46/220 (20%)
Query: 99 VSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLD 158
+++++G L+W T I+P ++IT ++Y YVG+S + + ++A LD
Sbjct: 1 MNKTSGTLLWKTTIEPNLNAKITSPPTIYEDRVYVGVSPGKS----------QSNIAALD 50
Query: 159 VRNGRIIWQTYMLPDNGGKRGGYSGAAVWGS---SPAIDVIRRQKQNNQTTKPTHPDQCI 215
++ G+ +WQ+ +P+ GA + G +P+ + N+ P H
Sbjct: 51 LKTGQPLWQSNSVPN---------GALINGPLTINPSKKRLYALTSNSGQASPLHN---- 97
Query: 216 SSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLL 275
+ ++++ LD+ +G T L+ + PN D +L
Sbjct: 98 ----HTDTLLVLDMRNG----------------TLLLKQSLKESTDPNTDNANKNGAILF 137
Query: 276 TISTNGRFRDVVVAVQKSGFAWAFDRDSGDIIWFKLAGPG 315
T++ NG RDVV + G D ++G I+W PG
Sbjct: 138 TLNINGTTRDVVAIPEAQGHYQVLDANNGTILWSTDITPG 177
>gi|390956870|ref|YP_006420627.1| glucose dehydrogenase [Terriglobus roseus DSM 18391]
gi|390411788|gb|AFL87292.1| glucose dehydrogenase [Terriglobus roseus DSM 18391]
Length = 649
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 82/330 (24%), Positives = 128/330 (38%), Gaps = 54/330 (16%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAGKDI--SATPAVANGVVYFPSWNG 58
W ++G D + R++ IN V L W+F+ G D TP V VVY S NG
Sbjct: 27 WASYGQDQGSSRFS-NLTQINAANVSKLERAWTFHTGGDSQNEVTPVVVESVVYLSSPNG 85
Query: 59 YLYAVNAFNGALIWEQNLSKLTGLSGTGIVVNVTVAVVVAVSRSNGELVWSTQIDPRPRS 118
Y +AV+A G IW+ + T T + A + + S G +V +P
Sbjct: 86 Y-FAVDAVTGEQIWKFAATDTTTRGVTYWPGDKEAAPRIIGAVSGGRIVALDTKTGKPVP 144
Query: 119 QITMSGSVYMGAFYVGLSSLEEALPADQ-----CCTFRGSLAKLDVRNGRIIWQTYMLPD 173
+ G YV + + + PA T + D + G+++W ++P
Sbjct: 145 EFGDGG-------YVDIKTKMTSPPAIYKGMLILPTMDKYVRAWDAKTGKMVWSFNLVPQ 197
Query: 174 NGGKRGGYS-----------GAAVWGSSPAIDVIRRQKQNNQTTKPTHPDQC----ISSD 218
G G+ G VWG I V + T P PD
Sbjct: 198 PG--EPGHETWENDAWKTTGGVNVWGY---ITVDEKLGIAFVPTAPPSPDYVGINRPGDT 252
Query: 219 IYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTIS 278
+Y S+VALD ++G++ W + L +D++ F D AP L+ +
Sbjct: 253 LYGTSLVALDANTGKLKWFRQLVHHDLWDF------------------DSSAAPALVEVK 294
Query: 279 TNGRFRDVVVAVQKSGFAWAFDRDSGDIIW 308
G+ VV + K+G + FDR G I+
Sbjct: 295 QKGKTVPAVVHMGKTGLMYIFDRRDGTPIF 324
>gi|254249957|ref|ZP_04943277.1| Glucose dehydrogenase [Burkholderia cenocepacia PC184]
gi|124876458|gb|EAY66448.1| Glucose dehydrogenase [Burkholderia cenocepacia PC184]
Length = 619
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 71/317 (22%), Positives = 120/317 (37%), Gaps = 54/317 (17%)
Query: 20 INPVTVRNLRLRWSFYAGKDI----SATPAVANGVVYFPSWNGYLYAVNAFNGALIW--E 73
I+ ++L+ W++ D+ ATP V ++ + +YA +A G +W E
Sbjct: 116 IDTSNAKDLKQVWAYKFPADLKQGFEATPIVNGNYLFVTTPKDNVYAFDAKTGKQLWKYE 175
Query: 74 QNLSKLTGLSGTGIVVNVTVAV-------------VVAVSRSNGELVWSTQI-DPRPRSQ 119
L + + VVN VA+ + A+ G LVW Q+ +P
Sbjct: 176 PKLGAASFKTACCDVVNRGVALYGKNVYIAMLNGEIAALDAQTGTLVWKKQMFEPGLGYA 235
Query: 120 ITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNGGK-- 177
+++ GA VG S E + RG +A L+ +G +W+ Y +P G K
Sbjct: 236 FSLAPLAIDGAIVVGTSGGEYGI--------RGYIAALNPEDGSQVWKRYTIPAAGEKGA 287
Query: 178 ------RGGYSGAAVWGSSPAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDS 231
+ G A W + R P ++Y++S++ALD S
Sbjct: 288 ETWPDGMQSHGGGAAWLTGTYDAASRTLYWGVGNPGPWLAALRPGDNLYSDSLLALDAKS 347
Query: 232 GRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQ 291
G + W D + D D A +L I G+ D ++
Sbjct: 348 GNLKWHYQYTNNDTW------------------DYDGVNAAVLADIKYKGKDYDAIIHAD 389
Query: 292 KSGFAWAFDRDSGDIIW 308
++GF A DR +G +I+
Sbjct: 390 RNGFFHAIDRTTGKLIY 406
>gi|358639874|dbj|BAL27170.1| putative alcohol dehydrogenase precursor [Azoarcus sp. KH32C]
Length = 578
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 76/330 (23%), Positives = 123/330 (37%), Gaps = 60/330 (18%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRN---LRLRWSFYAGKDI--SATPAVANGVVYFPS 55
WL + G+ +G ++ +T +N L+L W+F G+ + P V NG ++ +
Sbjct: 43 WLQYRGNYA----GWGYSALSQITDKNVGKLQLAWAFATGQKEGHQSPPIVNNGYMFVTT 98
Query: 56 WNGYLYAVNAFNGALIWE------------QNLSKLTGLSGTGIVVNVTVAVVVAVSRSN 103
+ A+ A G +W ++ L G + V A +VA+
Sbjct: 99 PGAQVIALEAKTGKELWRYKKELPGEMLQLHPTNRGVALYGDKVYVATVDAHLVALDAKT 158
Query: 104 GELVWSTQI-DPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNG 162
G+ VW Q+ D + IT++ G VG S E + RG +A D G
Sbjct: 159 GKEVWIKQVGDWKALQYITLAPLAAKGKIMVGSSGGETGV--------RGYVAAFDAETG 210
Query: 163 RIIWQTYMLPDNG--------GKRGGYSGAAVW--GSSPAIDVIRRQKQNNQTTKPTHPD 212
W+TY G G+ G ++W GS + N PT
Sbjct: 211 EEAWRTYTTAAPGEPGGDTWPGETYKNGGGSIWITGSYDPDTNLAYWGTGNPAPWPTEGR 270
Query: 213 QCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAP 272
+ ++Y S +ALD+D+G + YF P D D AP
Sbjct: 271 K--GDNLYTGSTIALDVDTGALK----------TYF--------QYNPNDAWDWDEVSAP 310
Query: 273 MLLTISTNGRFRDVVVAVQKSGFAWAFDRD 302
+L+ G+ V ++G+ W DRD
Sbjct: 311 LLIDTEVKGKKVKTAVHAGRNGYLWVLDRD 340
>gi|107025599|ref|YP_623110.1| Pyrrolo-quinoline quinone [Burkholderia cenocepacia AU 1054]
gi|116693219|ref|YP_838752.1| Pyrrolo-quinoline quinone [Burkholderia cenocepacia HI2424]
gi|105894973|gb|ABF78137.1| Pyrrolo-quinoline quinone [Burkholderia cenocepacia AU 1054]
gi|116651219|gb|ABK11859.1| Pyrrolo-quinoline quinone [Burkholderia cenocepacia HI2424]
Length = 573
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 71/317 (22%), Positives = 120/317 (37%), Gaps = 54/317 (17%)
Query: 20 INPVTVRNLRLRWSFYAGKDI----SATPAVANGVVYFPSWNGYLYAVNAFNGALIW--E 73
I+ ++L+ W++ D+ ATP V ++ + +YA +A G +W E
Sbjct: 70 IDTSNAKDLKQVWAYKFPADLKQGFEATPIVNGNYLFVTTPKDNVYAFDAKTGKQLWKYE 129
Query: 74 QNLSKLTGLSGTGIVVNVTVAV-------------VVAVSRSNGELVWSTQI-DPRPRSQ 119
L + + VVN VA+ + A+ G LVW Q+ +P
Sbjct: 130 PKLGAASFKTACCDVVNRGVALYGKNVYIAMLNGEIAALDAQTGTLVWKKQMFEPGLGYA 189
Query: 120 ITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNGGK-- 177
+++ GA VG S E + RG +A L+ +G +W+ Y +P G K
Sbjct: 190 FSLAPLAIDGAIVVGTSGGEYGI--------RGYIAALNPEDGSQVWKRYTIPAAGEKGA 241
Query: 178 ------RGGYSGAAVWGSSPAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDS 231
+ G A W + R P ++Y++S++ALD S
Sbjct: 242 ETWPDGMQSHGGGAAWLTGTYDAASRTLYWGVGNPGPWLAALRPGDNLYSDSLLALDAKS 301
Query: 232 GRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQ 291
G + W D + D D A +L I G+ D ++
Sbjct: 302 GNLKWHYQYTNNDTW------------------DYDGVNAAVLADIKYKGKDYDAIIHAD 343
Query: 292 KSGFAWAFDRDSGDIIW 308
++GF A DR +G +I+
Sbjct: 344 RNGFFHAIDRTTGKLIY 360
>gi|170737514|ref|YP_001778774.1| methanol/ethanol family PQQ-dependent dehydrogenase [Burkholderia
cenocepacia MC0-3]
gi|169819702|gb|ACA94284.1| PQQ-dependent dehydrogenase, methanol/ethanol family [Burkholderia
cenocepacia MC0-3]
Length = 573
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 71/317 (22%), Positives = 120/317 (37%), Gaps = 54/317 (17%)
Query: 20 INPVTVRNLRLRWSFYAGKDI----SATPAVANGVVYFPSWNGYLYAVNAFNGALIW--E 73
I+ ++L+ W++ D+ ATP V ++ + +YA +A G +W E
Sbjct: 70 IDTSNAKDLKQVWAYKFPADLKQGFEATPIVNGNYLFVTTPKDNVYAFDAKTGKQLWKYE 129
Query: 74 QNLSKLTGLSGTGIVVNVTVAV-------------VVAVSRSNGELVWSTQI-DPRPRSQ 119
L + + VVN VA+ + A+ G LVW Q+ +P
Sbjct: 130 PKLGAASFKTACCDVVNRGVALYGKNVYIAMLNGEIAALDAQTGTLVWKKQMFEPGLGYA 189
Query: 120 ITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNGGK-- 177
+++ GA VG S E + RG +A L+ +G +W+ Y +P G K
Sbjct: 190 FSLAPLAIDGAIVVGTSGGEYGI--------RGYIAALNPEDGSQVWKRYTIPAAGEKGA 241
Query: 178 ------RGGYSGAAVWGSSPAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDS 231
+ G A W + R P ++Y++S++ALD S
Sbjct: 242 ETWPDGMQSHGGGAAWLTGTYDAASRTLYWGVGNPGPWLAALRPGDNLYSDSLLALDAKS 301
Query: 232 GRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQ 291
G + W D + D D A +L I G+ D ++
Sbjct: 302 GNLKWHYQYTNNDTW------------------DYDGVNAAVLADIKYKGKDYDAIIHAD 343
Query: 292 KSGFAWAFDRDSGDIIW 308
++GF A DR +G +I+
Sbjct: 344 RNGFFHAIDRTTGKLIY 360
>gi|359790462|ref|ZP_09293361.1| methanol/ethanol family PQQ-dependent dehydrogenase [Mesorhizobium
alhagi CCNWXJ12-2]
gi|359253616|gb|EHK56723.1| methanol/ethanol family PQQ-dependent dehydrogenase [Mesorhizobium
alhagi CCNWXJ12-2]
Length = 601
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 79/368 (21%), Positives = 143/368 (38%), Gaps = 86/368 (23%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAG--KDISATPAVANGVVY----FP 54
W GD N RY+ IN V++L+++W+F G + P V V+Y FP
Sbjct: 10 WAMPTGDYANTRYSKLN-QINKDNVKDLQVKWTFSTGVLRGHEGGPLVIGDVMYVHTPFP 68
Query: 55 SWNGYLYAVNAFN-GALIWE---------------QNLSKLTGLSGTGIVVNVTVAVVVA 98
+ +YA++ N G ++W+ +++ I++N VVA
Sbjct: 69 N---IVYALDLKNDGKILWKYEPKQDPNVIPIMCCDTVNRGVAYGDGKIILNQADTTVVA 125
Query: 99 VSRSNGELVWS---TQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLA 155
+ GE+VWS + D T + V+ +G+S E + RG +A
Sbjct: 126 LDAKTGEVVWSVKNAETDGSKGESGTAAPMVFKDKVLIGVSGAEFGV--------RGWIA 177
Query: 156 KLDVRNGRIIWQTYML---------------------PDNG-----GKRGGYSGAAVWG- 188
++ +G + W+ Y PD+G G++ G WG
Sbjct: 178 AYNLSDGSLAWKGYSTGPDSETLMDPEKTTHLGKPVGPDSGISTWEGEQWKTGGGTTWGW 237
Query: 189 --SSPAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIF 246
P ++++ N T P Q + ++ +I A D D+G W + +D +
Sbjct: 238 FAFDPKLNLVYYGTGNPSTWNPV---QRPGDNRWSMTIFARDADTGEAKWVYQMTPHDEW 294
Query: 247 YFTCLVPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDI 306
+ + E ++ + G+ RDV+V ++GFA+ DR +G++
Sbjct: 295 DYDGV-----------------NEMILVDGMDIEGQSRDVLVHFDRNGFAYTLDRANGEL 337
Query: 307 IWFKLAGP 314
+ K P
Sbjct: 338 LVAKKYDP 345
>gi|408673938|ref|YP_006873686.1| PQQ-dependent enzyme [Emticicia oligotrophica DSM 17448]
gi|387855562|gb|AFK03659.1| PQQ-dependent enzyme [Emticicia oligotrophica DSM 17448]
Length = 710
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 83/353 (23%), Positives = 135/353 (38%), Gaps = 80/353 (22%)
Query: 4 HGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAG--------KDISATPAVANGVVYFPS 55
+GGD N A + I P V +L+L W + +G I P + G++Y S
Sbjct: 41 NGGDNCNHYSALSQ--ITPENVSSLKLAWVYSSGGADTMKNATQIQCNPLIIKGILYGVS 98
Query: 56 WNGYLYAVNAFNGALIWEQNLSKLT-GLSGTGI----------VVNVTVAVVVAVSRSNG 104
+A++A +G IW+ L T ++ GI + A + A+ NG
Sbjct: 99 AGSQAFAIDAASGKEIWKTELKDNTFSMTSRGISYWTDGREERIFFGYGAFLYALDAKNG 158
Query: 105 ELVWS-------TQID--PRPRSQ----ITMSGSVYMGAFYVGLSSLEEALPADQCCTFR 151
+ + S ID RP + + ++Y VG+ E A
Sbjct: 159 QPILSFGTKGKIHLIDGIKRPGADEYVVLNTPPAIYKNTLIVGMRVSESA------TALL 212
Query: 152 GSLAKLDVRNGRIIWQTYMLPDNGG------KRGGYS---GAAVWGSSPAIDVIRRQKQN 202
G + D R G+ +W + +P ++ Y GA W AID ++
Sbjct: 213 GDIRAFDARTGKKLWTFHTIPHPNEFGYKTWEKDNYKNIGGANNWMGM-AID-----QKR 266
Query: 203 NQTTKPT-------HPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNN 255
PT + +++AN ++ALD ++G+ W +DI+
Sbjct: 267 GIVYAPTGSAAFDFYGGNRKGDNLFANCLLALDANTGKRLWHFQTVHHDIW--------- 317
Query: 256 PDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDIIW 308
D D P L TI+ +G+ DVV + K GF + FDR SG I+
Sbjct: 318 ---------DRDIPAPPNLFTITQHGKKIDVVSVLSKQGFTFVFDRVSGKPIF 361
>gi|410447537|ref|ZP_11301632.1| putative lupanine hydroxylase [SAR86 cluster bacterium SAR86E]
gi|409979548|gb|EKO36307.1| putative lupanine hydroxylase [SAR86 cluster bacterium SAR86E]
Length = 692
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 83/349 (23%), Positives = 140/349 (40%), Gaps = 71/349 (20%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAG--KDISATPAVANGVVYFPSWNG 58
WL HG + R++ IN V+ L L WSF G + TP V +G+++ +
Sbjct: 37 WLLHGRTYDESRFSPLND-INDSNVKELGLSWSFETGTNRGHETTPIVVDGMMFITAPWS 95
Query: 59 YLYAVNAFNGALIW--EQNLSKLTGLSGTGIVVNVTVAV-------------VVAVSRSN 103
++A++A G IW + K + VVN VAV ++++ + +
Sbjct: 96 VVFALDAKTGKEIWSYDPKADKAWARNACCDVVNRGVAVWGDSVVFATIDGRLISLDKES 155
Query: 104 GELVWST-QIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNG 162
GE++W ID IT + + G +G E + RG ++ D+ +G
Sbjct: 156 GEVIWDVLTIDKTKPYTITGAPRIIDGKIIIGNGGGEFGV--------RGYISAYDIEDG 207
Query: 163 RIIWQTYMLPDN------------------GGK---RGGYSGAAVWGS---SPAIDVIRR 198
++W+ + +P N GGK GG G VW S P ++++
Sbjct: 208 SMLWRFFTVPGNPDEPFESPALAKAAETWSGGKWWEIGG--GGTVWDSMAYDPELNLLYI 265
Query: 199 QKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDC 258
N ++Y +SIVA++ ++G W Y T
Sbjct: 266 GTGNGSPWNRYVRSPGGGDNLYLSSIVAINPENGEYVW---------HYQTT-------- 308
Query: 259 PPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
PG D + +L I +G+ R V++ K+GF + DR SG+ I
Sbjct: 309 -PGDTWDYTATQHMILADIDIDGKQRKVIMQAPKNGFFYVIDRISGEFI 356
>gi|170693180|ref|ZP_02884341.1| PQQ-dependent dehydrogenase, methanol/ethanol family [Burkholderia
graminis C4D1M]
gi|170142178|gb|EDT10345.1| PQQ-dependent dehydrogenase, methanol/ethanol family [Burkholderia
graminis C4D1M]
Length = 575
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 72/311 (23%), Positives = 125/311 (40%), Gaps = 38/311 (12%)
Query: 20 INPVTVRNLRLRWSFYAGKDI----SATPAVANGVVYFPSWNGYLYAVNAFNGALIW--E 73
I+ V+ L+ WS+ ++ ATP V ++ + +YA +A +G +W E
Sbjct: 70 IDTSNVKQLKQVWSYKFPAELQQGFEATPIVNGRYLFVTTPKDNVYAFDAASGKQLWKFE 129
Query: 74 QNLSKLTGLSGTGIVVNVTVAVV---VAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGA 130
LS + + V+N VA+ V V+ NGE+V P + M A
Sbjct: 130 PKLSAESFKTACCDVINRGVALYGKNVYVAMLNGEVVALDAQTGSPTWRKAMFEPGVGYA 189
Query: 131 FYVGLSSLEEAL---PADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGG------- 180
F + +L+ AL A RG +A L+ NG ++W+ + +P G K G
Sbjct: 190 FSLAPLALDGALVVGSAGGEYGARGFIAALNPDNGNVLWKRFTVPAAGEKGGNTWPDGMQ 249
Query: 181 -YSGAAVWGSSPAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKP 239
+ GA W + + P D ++Y++S++ALD +G + W
Sbjct: 250 EHGGAPAWLTGTYDAASKTLYWGVGNPGPWLADLRPGDNLYSDSLLALDPKTGDLKWHYQ 309
Query: 240 LGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAF 299
+D + D D P+L I + D ++ ++G+ A
Sbjct: 310 YTKHDTW------------------DYDGVNTPVLANIKYQDKDYDAIIHADRNGYFHAI 351
Query: 300 DRDSGDIIWFK 310
DR +G +I+ K
Sbjct: 352 DRSTGKLIYAK 362
>gi|73537991|ref|YP_298358.1| Pyrrolo-quinoline quinone:cytochrome c, class I [Ralstonia eutropha
JMP134]
gi|72121328|gb|AAZ63514.1| Pyrrolo-quinoline quinone:Cytochrome c, class I [Ralstonia eutropha
JMP134]
Length = 718
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 81/350 (23%), Positives = 133/350 (38%), Gaps = 71/350 (20%)
Query: 1 WLNHGGDLNNRRYA-YGEVLINPVTVRNLRLRWSF--YAGKDISATPAVANGVVYFPSWN 57
W ++G D R++ G+V N V+ L L WS+ + + + ATP V +GV+Y +
Sbjct: 64 WPSYGLDYAETRFSRLGQV--NAGNVKELGLVWSYNLESTRGVEATPLVVDGVMYVSASW 121
Query: 58 GYLYAVNAFNGALIW--EQNLSKLTGLSGTGIVVNVTVAV-------------VVAVSRS 102
++A++ G +W + + K G G VVN VA+ ++AV
Sbjct: 122 SVVHAIDTRTGKRLWTFDPKVDKSIGYKGCCDVVNRGVALYQGKVFVASYDGRLIAVDAV 181
Query: 103 NGELVWS--TQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVR 160
G +W T ID IT + V G +G S E + RG + D
Sbjct: 182 TGRKLWEKDTIIDHSRAYTITGAPRVVKGKVIIGNSGAEYGV--------RGYITAYDAS 233
Query: 161 NGRIIWQTYMLPDNGGK--------RGGYS------------GAAVWGS---SPAIDVIR 197
+G W+ + +P + K R + G W + P ++++
Sbjct: 234 SGEQKWRWFTVPGDPAKPFEDASMARAAQTWDPAGKWWEAGGGGTAWDTLTFDPELNLMY 293
Query: 198 RQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPD 257
N ++Y SIVALD D+G+ W +
Sbjct: 294 VGTGNGSPWAHRTRSPAGGDNLYLASIVALDPDTGKYVW------------------HYQ 335
Query: 258 CPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
PG N D +L + +G+ R V++ K+GF + DR G I
Sbjct: 336 ETPGDNWDYTSTSPMILADLKIDGQPRKVILHAPKNGFFFVIDRTDGRFI 385
>gi|58039529|ref|YP_191493.1| alcohol dehydrogenase [Gluconobacter oxydans 621H]
gi|61252121|sp|O05542.2|DHET_GLUOX RecName: Full=Alcohol dehydrogenase [cytochrome c]; AltName:
Full=G3-ADH subunit I; Flags: Precursor
gi|58001943|gb|AAW60837.1| Alcohol dehydrogenase large subunit [Gluconobacter oxydans 621H]
Length = 757
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 73/358 (20%), Positives = 131/358 (36%), Gaps = 78/358 (21%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFY--AGKDISATPAVANGVVYFPSWNG 58
WL++G + +RY+ + IN V L+L W + + TP + NGV+Y +
Sbjct: 54 WLSYGRSYSEQRYSPLD-QINTENVGKLKLAWHYDLDTNRGQEGTPLIVNGVMYATTNWS 112
Query: 59 YLYAVNAFNGALIWEQNLSKLTGLSGTGIVVNVTVAV---------------VVAVSRSN 103
+ A++A G L+W + ++ G V+ ++A+
Sbjct: 113 KMKALDAATGKLLWSYDPKVPGNIADRGCCDTVSRGAAYWNGKVYFGTFDGRLIALDAKT 172
Query: 104 GELVWSTQIDPRP-----RSQITMSGS--VYMGAFYVGLSSLEEALPADQCCTFRGSLAK 156
G+LVWS P+ + T+ G+ + G +G E RG ++
Sbjct: 173 GKLVWSVYTIPKEAQLGHQRSYTVDGAPRIAKGKVLIGNGGAEFGA--------RGFVSA 224
Query: 157 LDVRNGRIIWQTYMLPD------------------------NGGKRGGYSGAAVWGS--- 189
D G++ W+ + +P+ NG + G VW S
Sbjct: 225 FDAETGKLDWRFFTVPNPENKPDGAASDDILMSKAYPTWGKNGAWKQQGGGGTVWDSLVY 284
Query: 190 SPAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFT 249
P D++ N + +++ SIVA++ D+G+ W D + +T
Sbjct: 285 DPVTDLVYLGVGNGSPWNYKFRSEGKGDNLFLGSIVAINPDTGKYVWHFQETPMDEWDYT 344
Query: 250 CLVPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
+ + M L + NG R V+V K+GF + D +G I
Sbjct: 345 SV------------------QQIMTLDMPVNGEMRHVIVHAPKNGFFYIIDAKTGKFI 384
>gi|407698194|ref|YP_006822982.1| dehydrogenase, PQQ dependent [Alcanivorax dieselolei B5]
gi|407255532|gb|AFT72639.1| Dehydrogenase, PQQ dependent [Alcanivorax dieselolei B5]
Length = 698
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 78/349 (22%), Positives = 133/349 (38%), Gaps = 69/349 (19%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSF--YAGKDISATPAVANGVVYFPSWNG 58
W +HG D R++ I V L L WS+ + + I ATP V +G +Y +
Sbjct: 49 WPSHGFDYAGTRFS-PLTQITSKNVDKLGLAWSYNLESTRGIEATPIVVDGTMYVTASWS 107
Query: 59 YLYAVNAFNGALIW--EQNLSKLTGLSGTGIVVNVTVAV-------------VVAVSRSN 103
++A++A G +W + + + VVN VAV +VA+ ++
Sbjct: 108 VVHALDAKTGKRLWSYDPKVPREKAYQACCDVVNRGVAVYKGKVFVGSLDGRLVALDANS 167
Query: 104 GELVWSTQ--IDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRN 161
G+ +W T ID +T + V+ G +G E + RG + D
Sbjct: 168 GKKLWETDTIIDRSRPYTVTGAPRVFRGNVIIGNGGAEFGV--------RGYITAYDAET 219
Query: 162 GRIIWQTYMLPDNGGK----------------RGGY----SGAAVWGS---SPAIDVIRR 198
G+ W+ + +P + K +G Y G VW S P ++++
Sbjct: 220 GKQKWRWFTVPGDPAKPYENEAMAKAAKTWDPKGKYWESGGGGTVWNSMVFDPELNLMYI 279
Query: 199 QKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDC 258
N ++Y SIVA++ ++G W +
Sbjct: 280 GTGNGTPWVHRKRSPAGGDNLYLASIVAINPETGDYVW------------------HYQE 321
Query: 259 PPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
PG N D + +L I +G+ R V++ K+GF + DR +G I
Sbjct: 322 TPGDNWDYTSTQDLILADIKIDGKLRKVIMHAPKNGFFFVVDRTNGKFI 370
>gi|404447833|ref|ZP_11012827.1| quinoprotein glucose dehydrogenase [Indibacter alkaliphilus LW1]
gi|403766419|gb|EJZ27291.1| quinoprotein glucose dehydrogenase [Indibacter alkaliphilus LW1]
Length = 758
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 81/345 (23%), Positives = 136/345 (39%), Gaps = 63/345 (18%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAGKDISA---TPAVANGVVYFPSWN 57
W ++GG +Y E I P V L + W Y +D + +P + + ++Y N
Sbjct: 41 WTHYGGSPEQSKYFNAE-QITPENVNRLEVSW-IYPTEDNTPYFFSPIIVDTLMYVMGKN 98
Query: 58 GYLYAVNAFNGALIWEQNLSKLTGLSGTGI---------------VVNVTVAVVVAVSR- 101
L A+N NG +W S L GL+ GI +N T+ + A++
Sbjct: 99 NSLIALNVKNGQEVWIH--SNLNGLTRRGINYWENEDKSDRRLIFTINNTIQAIDAMTGQ 156
Query: 102 ------SNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLA 155
++G + +D RP S I + G Y L + A + + G +
Sbjct: 157 SIVSFGNDGYVDLRAGLD-RPPSSIRRIQPMMPGVLYDDLLIIGSAT-GENYFSPPGHVR 214
Query: 156 KLDVRNGRIIWQTYMLPDNGG------KRGGYS---GAAVWGSSPAIDVIRRQKQNNQTT 206
+V G + W + +P G + Y G VW S +D +
Sbjct: 215 AYNVITGEMEWIFHTIPYPGEFGYETWPKDAYKYVGGVNVW-SEITVDS-EKGIAFLPLG 272
Query: 207 KPTHP---DQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPN 263
PT+ I S+++ NS+VALD +G+ W +D++
Sbjct: 273 SPTYDYYGADRIGSNLFGNSLVALDARTGKRLWHYQTVHHDLW----------------- 315
Query: 264 LDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDIIW 308
D D AP LLT++ NG+ + + K GF + FDR +G+ ++
Sbjct: 316 -DYDLSPAPQLLTLNRNGKRIEAIAIATKHGFVFVFDRVTGEPVF 359
>gi|357406818|ref|YP_004918742.1| dehydrogenase xoxF [Methylomicrobium alcaliphilum 20Z]
gi|351719483|emb|CCE25159.1| putative dehydrogenase xoxF [Methylomicrobium alcaliphilum 20Z]
Length = 617
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 89/363 (24%), Positives = 140/363 (38%), Gaps = 89/363 (24%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAG--KDISATPAVANGVVY----FP 54
W GG+ RY+ + IN V+NL+ W+F G + P V N V+Y FP
Sbjct: 40 WATWGGNYQGTRYSELK-QINTSNVKNLQPSWTFSTGVLRGHEGGPLVINDVMYIHTPFP 98
Query: 55 SWNGYLYAVNAFNGALIWE---QNLSKLT-----------GLS-GTG-IVVNVTVAVVVA 98
+ +YA++ + A+IWE Q + +T GL+ G G I + + V+ A
Sbjct: 99 N---TVYAIDQKSQAVIWEYTPQQDADVTIPVMCCDTVNRGLAYGDGKIFLQQSDTVLTA 155
Query: 99 VSRSNGELVWSTQI-DPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKL 157
+ G+ VWS Q DP+ T + V G+S E + RG LA
Sbjct: 156 LDAKTGKRVWSVQNGDPKLGMTNTQAPLVVKDKVITGISGGEFGV--------RGFLAAY 207
Query: 158 DVRNGRIIWQTY-MLPDNG-------------------GKRGGYS----------GAAVW 187
++R G + W+ Y M PD GK S G W
Sbjct: 208 NIRTGELDWKGYSMGPDADTLINATKTTTWKDGKVQPVGKDSSLSTWEGDQWKIGGGTTW 267
Query: 188 G---SSPAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYD 244
G P ++++ N T P Q + ++ S+ A D D+G + W
Sbjct: 268 GWYSYDPELNLVYYGSGNPSTWNPA---QRPGDNKWSMSLWARDADTGEVKW-------- 316
Query: 245 IFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSG 304
++ T P D D L+ NG+ R V ++GF + DR +G
Sbjct: 317 VYQMT----------PHDEWDYDGINEVALVDQEINGKMRKTAVHFDRNGFGYTLDRVTG 366
Query: 305 DII 307
+++
Sbjct: 367 ELL 369
>gi|332662725|ref|YP_004445513.1| quinoprotein glucose dehydrogenase [Haliscomenobacter hydrossis DSM
1100]
gi|332331539|gb|AEE48640.1| Quinoprotein glucose dehydrogenase [Haliscomenobacter hydrossis DSM
1100]
Length = 764
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 76/347 (21%), Positives = 136/347 (39%), Gaps = 67/347 (19%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAG--KDISATPAVANGVVYFPSWNG 58
W ++GG + RY + I V +++ W++ +G + +P + + +Y N
Sbjct: 54 WTHYGGSPDQSRY-FAAADITKENVGKMQVAWTYPSGDQQPYFFSPIIVDTTMYVMGKNN 112
Query: 59 YLYAVNAFNGALIWEQNLSKLTGLSGTGI---------------VVNVTVAVVVAVSRS- 102
L AV+ +G IW + L GLS G+ +N ++ + AV+
Sbjct: 113 SLIAVSVLSGKEIWIH--ANLMGLSRRGLNYWESKDKKDKRLIFTLNNSLQAIDAVTGKT 170
Query: 103 ------NGELVWSTQIDPRP----RSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRG 152
+G + P R Q M G +Y VG + P + + G
Sbjct: 171 ITSFGNDGYTDMREGLGREPSSIRRMQAMMPGVIYDDLVIVG------SAPGEGFFSAPG 224
Query: 153 SLAKLDVRNGRIIWQTYMLPDNGG------KRGGYS---GAAVWGSSPAIDVIRRQK--Q 201
+ +V +G++ W + +P G + Y G VW S ++D R
Sbjct: 225 FVRAYNVVSGKLEWTFHTIPQPGEFGYKTWPKNAYKYVGGVNVW-SEISVDQTRGIAFLP 283
Query: 202 NNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPG 261
T + + S+++ N +VALD +G+ W + +D++
Sbjct: 284 IGSPTYDFYGADRLGSNLFGNCLVALDARTGKRLWHYQIVHHDLW--------------- 328
Query: 262 PNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDIIW 308
D D AP LLT++ G+ D V K GF + FDR++G ++
Sbjct: 329 ---DVDLASAPQLLTVNHGGKNIDAVAVATKHGFLFVFDRETGKPLF 372
Score = 38.1 bits (87), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 42/87 (48%), Gaps = 15/87 (17%)
Query: 222 NSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTISTNG 281
+SIVA D++ G I W KP+G D Y P+ + G + +++ G
Sbjct: 635 SSIVAYDLNKGTIKWRKPVG-LDSLY----------AKGDPSKGSPGGTLRKGMVVTSTG 683
Query: 282 RFRDVVVAVQKSGFAWAFDRDSGDIIW 308
VV A K G +AFD D+G+I+W
Sbjct: 684 ----VVFATAKGGKLYAFDADNGNILW 706
>gi|325002630|ref|ZP_08123742.1| quinoprotein ethanol dehydrogenase precursor [Pseudonocardia sp.
P1]
Length = 562
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 75/342 (21%), Positives = 129/342 (37%), Gaps = 65/342 (19%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAGK----------DISATPAVANGV 50
WL + G + +RY+ + IN VR L W F AG A+P V GV
Sbjct: 44 WLTYYGTYDGQRYSELD-QINKDNVRRLTPAWVFQAGAVGMQSGASTYSFEASPIVVEGV 102
Query: 51 VYFPSWNGYLYAVNAFNGALIWEQNLSKLTGLS------------GTGIVVNVTV-AVVV 97
+Y +G +A++A G +W + +S G G V T+ A ++
Sbjct: 103 MYVSGPDGRAWAIDAKTGEELWRYKHASPYDVSLCCGNVNRGVAVGHGKVYMYTLNAHLI 162
Query: 98 AVSRSNGELVWST-QIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAK 156
A+ GE VW D R +++ + G + E + RG L
Sbjct: 163 ALDARTGEKVWDVVNGDVRAGESGSVAPLIVKDMVICGSAGGEFGV--------RGHLDA 214
Query: 157 LDVRNGRIIWQTYMLPDNG----------GKRGGYSGAAVWGSSPAIDVIRRQKQNNQTT 206
D + G W+ YM+P G G+ GA W + + Q
Sbjct: 215 FDAQTGERRWRCYMVPKPGEPGSETWPDDGEAWQRGGANCWVTPTYDPELELLFQGTGNP 274
Query: 207 KPTHPDQCISSD-IYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLD 265
P D +Y +S VA+D+++G+I W +D++ + + N
Sbjct: 275 APDFDGAVRPGDNLYTDSTVAVDVNTGQIRWHYQFTPHDLWDYDSTMEN----------- 323
Query: 266 ADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
+L + +G R ++ K+G+ + DR +G+++
Sbjct: 324 --------VLFDAPDG--RKLLAHADKNGYFFVLDRTNGELV 355
>gi|414173995|ref|ZP_11428622.1| methanol/ethanol family PQQ-dependent dehydrogenase [Afipia
broomeae ATCC 49717]
gi|410890629|gb|EKS38428.1| methanol/ethanol family PQQ-dependent dehydrogenase [Afipia
broomeae ATCC 49717]
Length = 726
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 75/330 (22%), Positives = 126/330 (38%), Gaps = 68/330 (20%)
Query: 20 INPVTVRNLRLRWSF--YAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIW--EQN 75
IN V+NL L W++ + + + ATP V +G++Y + ++A++ G IW +
Sbjct: 95 INTDNVKNLGLMWTYNLESSRGVEATPLVVDGIMYVTASWSVVHAIDVRTGKRIWSFDPE 154
Query: 76 LSKLTGLSGTGIVVNVTVAV-------------VVAVSRSNGELVWS--TQIDPRPRSQI 120
+S+ G G VVN VA+ ++A+ G+ VW T ID I
Sbjct: 155 VSRSIGYKGCCDVVNRGVALHKGKVFVGAYDGRLIALDAVTGKKVWEKDTLIDKEHSYTI 214
Query: 121 TMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNGGK--- 177
T + V G +G E RG + D G W+ +++P + K
Sbjct: 215 TGAPRVVNGKVVIGNGGAEYGA--------RGYVTAYDAETGNQAWRWFVVPGDPSKPYE 266
Query: 178 -------------RGGY----SGAAVWGS---SPAIDVIRRQKQNNQTTKPTHPDQCISS 217
G Y G W + P ++++ N
Sbjct: 267 DESMEAAAKTWDPAGKYWVNGGGGTAWDTITFDPDLNLVYIGTGNGSPWNRHLRSPAGGD 326
Query: 218 DIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTI 277
++Y SIVAL+ D+G+ W + PG + D + +L I
Sbjct: 327 NLYLASIVALNADTGKYVW------------------HYQETPGDHWDYTSTQPMILADI 368
Query: 278 STNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
+ +G R V++ K+GF + DR +G I
Sbjct: 369 NIDGAPRKVILHAPKNGFFFVIDRTNGKFI 398
>gi|197106573|ref|YP_002131950.1| glucose dehydrogenase [Phenylobacterium zucineum HLK1]
gi|196479993|gb|ACG79521.1| glucose dehydrogenase [Phenylobacterium zucineum HLK1]
Length = 716
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 80/351 (22%), Positives = 132/351 (37%), Gaps = 71/351 (20%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRW--SFYAGKDISATPAVANGVVYFPSWNG 58
WL++G + +R++ + +N V L L W F + ATP VA+GV+Y +
Sbjct: 43 WLSYGKGYSEQRFSPLDE-VNTGNVGQLGLAWFAEFDTDRGQEATPLVADGVLYTTTAWS 101
Query: 59 YLYAVNAFNGALIW--EQNLSKLTGLSGTGIVVNVTVAV-------------VVAVSRSN 103
+YA +A G +W + + G VVN VA+ ++A+
Sbjct: 102 KVYAFDAKTGEQLWSFDPKVEGSKGFHACCDVVNRGVALWKGRVYVGVLDGRLIALDAKT 161
Query: 104 GELVWSTQIDPRPRS-QITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNG 162
G VWS Q R IT + V +G E + RG + D G
Sbjct: 162 GRQVWSVQTTDTSRPYTITGAPRVIKDKVLIGNGGGEYGV--------RGYITAYDAATG 213
Query: 163 RIIWQTYMLPDNGGKRGGYS-----------------------GAAVWGS---SPAIDVI 196
+ +W+ Y +P+ G+ G + G W S P +D++
Sbjct: 214 KQLWRFYTVPNPTGQPDGAASDKVMAEKANATWSEGEWKKTGGGGTAWDSIAYDPQLDLV 273
Query: 197 RRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNP 256
N +++ +SI+AL D+G W Y T
Sbjct: 274 YFGIGNGNPWNHKIRSGGKGDNLFLSSILALKPDTGDYVW---------HYQTT------ 318
Query: 257 DCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
PG + D + +L +S G+ R V++ K+GF + DR +G +I
Sbjct: 319 ---PGESWDYTATQHIILADLSIGGQPRKVLMQAPKNGFFYVIDRATGQLI 366
>gi|118555|sp|P18278.1|DHET_ACEAC RecName: Full=Methanol dehydrogenase [cytochrome c]; Flags:
Precursor
gi|216194|dbj|BAA14058.1| 72K dehydrogenase subunit precursor [Acetobacter aceti]
Length = 742
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 75/353 (21%), Positives = 131/353 (37%), Gaps = 68/353 (19%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRL--RWSFYAGKDISATPAVANGVVYFPSWNG 58
WL++G + +RY+ + IN V +L+L ++ + ATP V +G++Y +
Sbjct: 55 WLSYGRTYSEQRYSPLD-QINRSNVGDLKLLGYYTLDTNRGQEATPLVVDGIMYATTNWS 113
Query: 59 YLYAVNAFNGALIWEQNLSKLTGLSGTGIVVNVTVAV---------------VVAVSRSN 103
+ A++A G L+W+ + ++ G V +VA
Sbjct: 114 KMEALDAATGKLLWQYDPKVPGNIADKGCCDTVNRGAGYWNGKVFWGTFDGRLVAADAKT 173
Query: 104 GELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTF--RGSLAKLDVRN 161
G+ VW+ P S GA V + L + F RG ++ D
Sbjct: 174 GKKVWAVNTIPADASLGKQRSYTVDGAVRVAKGLV---LIGNGGAEFGARGFVSAFDAET 230
Query: 162 GRIIWQTYMLPDNG--------------------GKRGGY----SGAAVWGS---SPAID 194
G++ W+ Y +P+N G +G + G VW S P D
Sbjct: 231 GKLKWRFYTVPNNKNEPDHAASDNILMNKAYKTWGPKGAWVRQGGGGTVWDSLVYDPVSD 290
Query: 195 VIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPN 254
+I N + + I S+++ SIVAL ++G W D + +T +
Sbjct: 291 LIYLAVGNGSPWNYKYRSEGIGSNLFLGSIVALKPETGEYVWHFQATPMDQWDYTSV--- 347
Query: 255 NPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
+ M L + G R V+V K+GF + D +G+ +
Sbjct: 348 ---------------QQIMTLDMPVKGEMRHVIVHAPKNGFFYVLDAKTGEFL 385
>gi|333915032|ref|YP_004488764.1| methanol/ethanol family PQQ-dependent dehydrogenase [Delftia sp.
Cs1-4]
gi|333745232|gb|AEF90409.1| PQQ-dependent dehydrogenase, methanol/ethanol family [Delftia sp.
Cs1-4]
Length = 707
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 81/351 (23%), Positives = 132/351 (37%), Gaps = 73/351 (20%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSF--YAGKDISATPAVANGVVYFPSWNG 58
W ++G D + R++ L + V+ L L WS+ + + + +TP V +G++Y +
Sbjct: 60 WPSYGMDYSETRFSKLRQL-DTANVKRLGLVWSYDLESTRGVESTPVVVDGIMYVTASWS 118
Query: 59 YLYAVNAFNGALIWEQN--LSKLTGLSGTGIVVNVTVAV-------------VVAVSRSN 103
++AV+ G +W + + + G G VVN VAV +VA+ +
Sbjct: 119 VVHAVDVRTGKRLWSYDPGVDRANGFKGCCDVVNRGVAVYKGKVYVGAFDGRLVALDAAT 178
Query: 104 GELVWS--TQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRN 161
G+ VW T ID IT + V G +G E + RG + D
Sbjct: 179 GQKVWEQDTIIDRAFSYTITGAPRVIKGKVLIGNGGAEYGV--------RGYVTAYDAET 230
Query: 162 GRIIWQTYMLP-------------------DNGGK---RGGYSGAAVWGS---SPAIDVI 196
G W+ + +P D GK GG G W + P ++++
Sbjct: 231 GAQQWRWFTVPGDPSKPFENEAMARAAKTWDPAGKWWEAGG--GGTAWDTMAYDPELNLM 288
Query: 197 RRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNP 256
N ++Y SIVAL+ D+G W D + FT P
Sbjct: 289 YIGTGNGSPWAQAKRSPAGGDNLYLASIVALNPDTGEYVWHYQETPGDSWDFTSTQPM-- 346
Query: 257 DCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
+L I G+ R V++ K+GF + DR +G I
Sbjct: 347 ----------------VLADIKVGGKPRKVILHAPKNGFFFVIDRTNGQFI 381
>gi|21321310|dbj|BAB97167.1| alcohol dehydrogenase [Acetobacter pasteurianus]
Length = 742
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 75/353 (21%), Positives = 129/353 (36%), Gaps = 68/353 (19%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFY--AGKDISATPAVANGVVYFPSWNG 58
WL++G + +RY+ + IN V +L+L W + + ATP V +G++Y +
Sbjct: 55 WLSYGRTYSEQRYSPLD-QINRSNVGDLKLAWYYTLDTNRGQEATPLVVDGIMYATTNWS 113
Query: 59 YLYAVNAFNGALIWEQNLSKLTGLSGTGIVVNVTVAV---------------VVAVSRSN 103
+ A++A G L+W+ + ++ G V +VA
Sbjct: 114 KMEALDAATGKLLWQYDPKVPDNIADKGCCDTVNRGAGYWNGKVFWGTFDGRLVAADAKT 173
Query: 104 GELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTF--RGSLAKLDVRN 161
G+ VW P S GA V + L + F RG ++
Sbjct: 174 GKKVWEVNTIPADASLGKQRSYTVDGAVRVAKGLV---LIGNGGAEFGARGFVSAFGAET 230
Query: 162 GRIIWQTYMLPDNG--------------------GKRGGYS----GAAVWG---SSPAID 194
G++ W+ Y +P+N G +G + G VW P D
Sbjct: 231 GKLKWRFYTVPNNKNETDHAASDNILMKKAYKTWGPKGAWERQGGGGTVWDFLVYDPVSD 290
Query: 195 VIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPN 254
+I N + + I S+++ SIVAL ++G W D + +T +
Sbjct: 291 LIYLAVGNGFPWNYKYRSEGIGSNLFLGSIVALKPETGEYVWHFQATPMDQWDYTSV--- 347
Query: 255 NPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
+ M L + NG R V+V K+GF + D +G+ +
Sbjct: 348 ---------------QQIMTLDMPVNGEMRHVIVHAPKNGFFYVLDAKTGEFL 385
>gi|448382882|ref|ZP_21562311.1| cell surface protein/ lipoprotein [Haloterrigena thermotolerans DSM
11522]
gi|445660062|gb|ELZ12859.1| cell surface protein/ lipoprotein [Haloterrigena thermotolerans DSM
11522]
Length = 469
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 60/119 (50%), Gaps = 15/119 (12%)
Query: 27 NLRLRWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG----L 82
+ R+RW+F G+++ ++P V NG VY +WNG LYA++A +G W + +
Sbjct: 72 DERVRWAFDTGQNVRSSPTVVNGTVYALNWNGLLYAIDAESGQQEWTFDTGGMRAGGDVF 131
Query: 83 SGTGIVVNVTVAV-------VVAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVG 134
+ VVN TV V V A+ ++GE W + D R + S SV G YVG
Sbjct: 132 YSSPAVVNGTVYVGSDEATSVYAIDAASGEKRWDYETDSR----VLSSPSVVDGTVYVG 186
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 81/175 (46%), Gaps = 13/175 (7%)
Query: 32 WSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTGLSGT----GI 87
W++ + +SA+P V +G VY SW+G +YA+ A +G +W + G S T +
Sbjct: 204 WTYGTERPVSASPTVVDGTVYVGSWDGVVYALTADDGDEVWTYEIRSSVGSSATVADGTV 263
Query: 88 VVNVTVAVVVAVSRSNGELVWSTQIDPRPRSQITMS-GSVYMGA-----FYVGLSSLEEA 141
V T + V A+ S+G+ W+ D S T++ G+VY+G+ + +G +S E
Sbjct: 264 YVGGTDSRVHAIDASSGDERWTFDTDGIVYSTPTVAGGTVYVGSADATVYALGTTSGEPV 323
Query: 142 LPADQCCTFRGS--LAKLDVRNGRIIWQTYML-PDNGGKRGGYSGAAVWGSSPAI 193
D R S +A V G Y L D+G +R Y SSP +
Sbjct: 324 WTVDTGDRVRSSPTVAGDTVFVGGDDEVVYALAADSGDERWTYETDGAVDSSPTV 378
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 55/110 (50%), Gaps = 12/110 (10%)
Query: 31 RWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTGLSGTGIVVN 90
RW + + ++P+V +G VY + +YA+ A +G IW + +S + VV+
Sbjct: 163 RWDYETDSRVLSSPSVVDGTVYVGGNDESVYALAADSGDEIWTYGTERP--VSASPTVVD 220
Query: 91 VTV------AVVVAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVG 134
TV VV A++ +G+ VW+ +I RS + S +V G YVG
Sbjct: 221 GTVYVGSWDGVVYALTADDGDEVWTYEI----RSSVGSSATVADGTVYVG 266
Score = 43.1 bits (100), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 56/118 (47%), Gaps = 5/118 (4%)
Query: 31 RWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWE----QNLSKLTGLSGTG 86
RW+F + +TP VA G VY S + +YA+ +G +W + ++G
Sbjct: 283 RWTFDTDGIVYSTPTVAGGTVYVGSADATVYALGTTSGEPVWTVDTGDRVRSSPTVAGDT 342
Query: 87 IVVNVTVAVVVAVSRSNGELVWSTQIDPRPRSQIT-MSGSVYMGAFYVGLSSLEEALP 143
+ V VV A++ +G+ W+ + D S T + G+VY+G+ + +LE L
Sbjct: 343 VFVGGDDEVVYALAADSGDERWTYETDGAVDSSPTVVDGTVYVGSMDDSVYALEAGLE 400
>gi|160898793|ref|YP_001564375.1| methanol/ethanol family PQQ-dependent dehydrogenase [Delftia
acidovorans SPH-1]
gi|160364377|gb|ABX35990.1| PQQ-dependent dehydrogenase, methanol/ethanol family [Delftia
acidovorans SPH-1]
Length = 707
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 81/351 (23%), Positives = 132/351 (37%), Gaps = 73/351 (20%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSF--YAGKDISATPAVANGVVYFPSWNG 58
W ++G D + R++ L + V+ L L WS+ + + + +TP V +G++Y +
Sbjct: 60 WPSYGMDYSETRFSKLRQL-DTANVKRLGLVWSYDLESTRGVESTPVVVDGIMYVTASWS 118
Query: 59 YLYAVNAFNGALIWEQN--LSKLTGLSGTGIVVNVTVAV-------------VVAVSRSN 103
++AV+ G +W + + + G G VVN VAV +VA+ +
Sbjct: 119 VVHAVDVRTGKRLWSYDPGVDRANGFKGCCDVVNRGVAVYKGKVYVGAFDGRLVALDAAT 178
Query: 104 GELVWS--TQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRN 161
G+ VW T ID IT + V G +G E + RG + D
Sbjct: 179 GQKVWEQDTIIDRAYSYTITGAPRVIKGKVLIGNGGAEYGV--------RGYVTAYDAET 230
Query: 162 GRIIWQTYMLP-------------------DNGGK---RGGYSGAAVWGS---SPAIDVI 196
G W+ + +P D GK GG G W + P ++++
Sbjct: 231 GAQQWRWFTVPGDPSKPFENEAMARAAKTWDPAGKWWEAGG--GGTAWDTMAYDPELNLM 288
Query: 197 RRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNP 256
N ++Y SIVAL+ D+G W D + FT P
Sbjct: 289 YIGTGNGSPWAQAKRSPAGGDNLYLASIVALNPDTGEYVWHYQETPGDSWDFTSTQPM-- 346
Query: 257 DCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
+L I G+ R V++ K+GF + DR +G I
Sbjct: 347 ----------------VLADIKIGGKPRKVILHAPKNGFFFVIDRTNGQFI 381
>gi|383770350|ref|YP_005449413.1| quinoprotein ethanol dehydrogenase [Bradyrhizobium sp. S23321]
gi|381358471|dbj|BAL75301.1| quinoprotein ethanol dehydrogenase precursor [Bradyrhizobium sp.
S23321]
Length = 554
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 79/339 (23%), Positives = 137/339 (40%), Gaps = 68/339 (20%)
Query: 2 LNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAGKDIS--ATPAVANGVVYFPSWNGY 59
LN+G N +R++ +N TV+NL W++ D S + P V GV+Y S N
Sbjct: 37 LNYGMGYNLQRFSTLN-QVNKDTVKNLVPVWNYSFNDDRSEESQPLVYQGVIYVTSHNAT 95
Query: 60 LYAVNAFNGALIWEQNLS---------------KLTGLSGTGIVVNVTVAVVVAVSRSNG 104
+ AV+A G IW+ + + L + A V+A+ NG
Sbjct: 96 M-AVDAKTGKQIWKSKIEYPAETPRIVCCGIINRGAALYDGKVFRTTLDANVIALDAKNG 154
Query: 105 ELVWSTQI-DPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGR 163
+ +W + D + +T++ V G G+S E RG + D G+
Sbjct: 155 KELWRQKAADIKEGYSMTVAPLVADGVVITGISGAEFGT--------RGFIDGWDPATGK 206
Query: 164 IIWQTYMLP---DNGG--------KRGGYSGAAVWGSSPAIDVIRRQKQN----NQTTKP 208
+W+T+ +P + GG K GG S P ++ + N N +P
Sbjct: 207 HLWRTHSIPSPDEPGGDTWKGDTWKLGGGSTWITGSYDPELNTVYWGIGNPGPFNSAVRP 266
Query: 209 THPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADF 268
++Y S++A+D +G+I W + F+ PNNP D D
Sbjct: 267 -------GDNLYTCSVLAMDPKTGKIKWH--------YQFS---PNNP-------FDYDS 301
Query: 269 GEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
+L ++ G+ V++ ++GF + DR +G ++
Sbjct: 302 VAEMVLADMNVEGKPTKVLMDANRNGFFYVLDRTNGKLL 340
>gi|399066940|ref|ZP_10748651.1| PQQ-dependent dehydrogenase, methanol/ethanol family
[Novosphingobium sp. AP12]
gi|398027644|gb|EJL21190.1| PQQ-dependent dehydrogenase, methanol/ethanol family
[Novosphingobium sp. AP12]
Length = 810
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 74/334 (22%), Positives = 122/334 (36%), Gaps = 74/334 (22%)
Query: 20 INPVTVRNLRLRWSFYAGKDISA-TPAVANGVVYFPSWNGYLYAVNAFNGALIWEQN--- 75
I+ V NL+L W F SA TP +A G V+ S + ++ A++A G +WE +
Sbjct: 63 IDTGNVANLKLAWHFDLEPGYSASTPLMAEGKVFLTSGHSHIRALDAVTGEQLWEYDGGT 122
Query: 76 -------LSKLTGLSGTG-----IVVNVTVAVVVAVSRSNGELVWST--QIDPRPRSQIT 121
L G G + + T V+++ G+ W T D PR+
Sbjct: 123 RERAKSALQMSWGNKGIAYDAGHVFLVTTDGYVISLDAKTGKEAWKTYDYPDQSPRNS-N 181
Query: 122 MSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYMLP--------- 172
+ V+ G VG + RG + D + G++ W+ Y P
Sbjct: 182 GAPRVFGGKVIVGFGGAD-------ISPARGFVTAYDAKTGKLAWRFYTTPGDPVTKANE 234
Query: 173 ----------------DNGGKRGGYSGAAVWGS---SPAIDVIRRQKQNNQTTKPTHPDQ 213
+G +RGG GA W + P + ++ N
Sbjct: 235 KAEAVMRKTWPSGWMNPDGSRRGG--GATAWNAFSYDPELRLVYLGLGNGFPYNQQKRSP 292
Query: 214 CISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPM 273
+++ SIVA+++D+G W Y C PG +
Sbjct: 293 GGGDNLFIASIVAVNVDTGEYKW---------HYQVC---------PGEQWNCTATTDMT 334
Query: 274 LLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
L T+ G+ R V++ K+GF + DR +G+ I
Sbjct: 335 LATLEIGGKERKVLMQAPKNGFFYVLDRATGEFI 368
>gi|88704762|ref|ZP_01102475.1| Quinohaemoprotein ethanol dehydrogenase type I [Congregibacter
litoralis KT71]
gi|88701083|gb|EAQ98189.1| Quinohaemoprotein ethanol dehydrogenase type I [Congregibacter
litoralis KT71]
Length = 747
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 86/361 (23%), Positives = 139/361 (38%), Gaps = 74/361 (20%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFY--AGKDISATPAVANGVVYFPSWNG 58
WL +GG + +R++ I+ V +L + W++ + + ATP V +GV+Y S
Sbjct: 80 WLTYGGSYDEQRHS-SLTNIDRENVADLGVAWTYELKTNRGVEATPIVVDGVMYVTSAWS 138
Query: 59 YLYAVNAFNGALIW--EQNLSKLTGLSGTGIVVNVTVAV-------------VVAVSRSN 103
+YA++A G +W + + K G++ VVN VAV + A+
Sbjct: 139 LVYALDAETGEELWVYDPEVDKAVGVNACCDVVNRGVAVYEGQVFVGVIDGRLEALDAKT 198
Query: 104 GELVWS-TQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNG 162
GE WS +D IT + V G +G E + RG L+ D +G
Sbjct: 199 GERNWSIVTVDQSKPYTITGAPRVVDGKVLIGNGGAEMGV--------RGYLSAYDANSG 250
Query: 163 RIIWQTYMLP--------------------DNGGKRGGY----SGAAVWGS---SPAIDV 195
IW+ Y +P D+ G G + G VW S D
Sbjct: 251 EKIWRFYTVPNPNKEPDNEISDEVFARFANDSWGDEGHWVTDGGGGTVWDSIVYDEVNDQ 310
Query: 196 IRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNN 255
I N D +++ +SIVA+D ++GR W +F
Sbjct: 311 IIFGVGNGSPWNRDFRDPSGGDNLFLSSIVAVDAETGRYRW----------HFQTT---- 356
Query: 256 PDCPPGPNLDADFGEAPML--LTISTNGRFRDVVVAVQKSGFAWAFDRDSGDIIWFKLAG 313
PG N D ++ +L L + +G V + K+GF + + ++G I G
Sbjct: 357 ----PGDNWDYTATQSIILADLPLGESGAPLRVAMQAPKNGFFYVVNAETGQFISGSAFG 412
Query: 314 P 314
P
Sbjct: 413 P 413
>gi|420249411|ref|ZP_14752656.1| PQQ-dependent dehydrogenase, methanol/ethanol family [Burkholderia
sp. BT03]
gi|398063963|gb|EJL55667.1| PQQ-dependent dehydrogenase, methanol/ethanol family [Burkholderia
sp. BT03]
Length = 575
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 66/321 (20%), Positives = 121/321 (37%), Gaps = 58/321 (18%)
Query: 20 INPVTVRNLRLRWSFYAGKDI----SATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQN 75
I+ V+NL+ W++ ++ ATP + ++ + +YA +A G +W+
Sbjct: 70 IDTSNVKNLKQTWAYKFPAELQQGFEATPIINGRYLFVTTPKDNVYAFDAATGKQLWKYE 129
Query: 76 ---------------LSKLTGLSGTGIVVNVTVAVVVAVSRSNGELVWS-TQIDPRPRSQ 119
+++ L G + V + V A+ G LVW + +P
Sbjct: 130 PKLGAEAFKNACCDVVNRGVALYGKNVYVAMLNGEVAALDAQTGALVWKKSMFEPATGYA 189
Query: 120 ITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNGGKRG 179
+++ + VG S E RG +A LD NG + W+ Y +P G K
Sbjct: 190 FSLAPLALDDSIVVGSSGGEYGA--------RGFIAALDPENGNVQWKRYTVP--GAKEP 239
Query: 180 G----------YSGAAVWGSSPAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDI 229
G + GA W + + P D ++Y++S++ALD
Sbjct: 240 GGNTWPDGTQEHGGAPAWLTGTFDPSSKTLYWGVGNPGPWLADLRPGDNLYSDSLLALDP 299
Query: 230 DSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVA 289
+G + W +D + D D P+L I G+ D ++
Sbjct: 300 KTGNLKWHYQYTRHDTW------------------DYDGVNTPVLANIKYEGKDYDAIIH 341
Query: 290 VQKSGFAWAFDRDSGDIIWFK 310
++G+ A DR +G +I+ +
Sbjct: 342 ADRNGYFHAIDRSNGKLIYAR 362
>gi|84685053|ref|ZP_01012952.1| probable quinoprotein ethanol dehydrogenase precursor
[Maritimibacter alkaliphilus HTCC2654]
gi|84666785|gb|EAQ13256.1| probable quinoprotein ethanol dehydrogenase precursor
[Rhodobacterales bacterium HTCC2654]
Length = 556
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 72/299 (24%), Positives = 117/299 (39%), Gaps = 57/299 (19%)
Query: 40 ISATPAVANGVVYFPSWNGYLYAVNAFNGA---LIW------EQNLSKLTGLSGTGIVV- 89
+ ATP V NG +Y G Y ++ +G ++W E++ + L+ G+ +
Sbjct: 65 MEATPLVDNGFMYVSDPWGSPYKIDVTSGTKGQILWVCDTGIEKDPTAGVLLANRGLALH 124
Query: 90 --NVTVAV----VVAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALP 143
NV A+ VVA + GE+ W Q P T + VG S + A
Sbjct: 125 GDNVITALNDGRVVACNNETGEVAWDVQAATEPGEGFTSAPLAVGDKILVGQSYGDWAT- 183
Query: 144 ADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNGG--------KRGG------YSGAAVWGS 189
RG LA LD G +W+ + +P+ G + G GAA+W +
Sbjct: 184 -------RGWLAALDAATGEEVWRFFTVPEPGQPGSETWLCEESGNPDCWKTGGAALWVT 236
Query: 190 SPAIDVIRRQKQNNQTTKPT-HPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYF 248
P P+ ++Y+NS +ALD D+G + W F +
Sbjct: 237 GSYDPETNTTYWGTGNPVPMFDPEFRPGDNLYSNSTIALDADTGELKWH--------FQY 288
Query: 249 TCLVPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
T PG +D D +L+ ++ +G R V+ ++G + DR+SG I
Sbjct: 289 T----------PGDYMDYDEVGIQLLMDVTVDGEERKVLSHFGRNGIFYTLDRNSGAYI 337
>gi|433592112|ref|YP_007281608.1| glucose dehydrogenase [Natrinema pellirubrum DSM 15624]
gi|448333456|ref|ZP_21522649.1| PQQ-dependent enzyme-like protein [Natrinema pellirubrum DSM 15624]
gi|433306892|gb|AGB32704.1| glucose dehydrogenase [Natrinema pellirubrum DSM 15624]
gi|445622459|gb|ELY75915.1| PQQ-dependent enzyme-like protein [Natrinema pellirubrum DSM 15624]
Length = 569
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 75/337 (22%), Positives = 126/337 (37%), Gaps = 66/337 (19%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFY--AGKDISATPAVANG---VVYFPS 55
WL +GG R +V I P V NL L + G + TP V G V+Y +
Sbjct: 63 WLMYGGSYEQHRATPADV-ITPENVANLELEYELSVGTGSSMEGTPIVVPGDPPVMYQTN 121
Query: 56 WNGYLYAVNAFNGALIWEQNLSKLTGLS-------------GTGIVVNVTVAVVVAVSRS 102
++ A++ G ++W + G+ G + + + VVA+ R
Sbjct: 122 GPNHMKAIDPREGEILWSYTYAVPMGVELCCDDNNRGAAVHGDTVYMTTLDSGVVALDRY 181
Query: 103 NGELVWSTQI-DPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRN 161
GE W T D T + V+ G Y G + E + G +A +D +
Sbjct: 182 TGEERWYTSTADHEEGYSATWAPVVHDGTIYTGSAGGEYGV--------LGFIAAIDAES 233
Query: 162 GRIIWQTYMLPDN---GGKRGGYSGAAVWGSSPAID---------VIRRQKQNNQTTKPT 209
G I WQT L ++ G R G + W +P ID V + T +P
Sbjct: 234 GEIQWQTDTLLEDEWVGASREHGCGTS-W-MTPTIDEEAGVLYTAVANPGPDFDGTVRP- 290
Query: 210 HPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFG 269
+ ++LD++SG W +D++ + + P
Sbjct: 291 ------GPNFPTCGTISLDLESGEFQWGFQSSPHDVWDYDAVAPRV-------------- 330
Query: 270 EAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDI 306
++ + T+ D+VV K+G+ + D +SGD+
Sbjct: 331 ---LIRDVETDDGSMDMVVGSDKTGWVYMMDAESGDL 364
>gi|119713156|gb|ABL97225.1| alcohol dehydrogenase [uncultured marine bacterium EB0_49D07]
Length = 692
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 83/349 (23%), Positives = 141/349 (40%), Gaps = 71/349 (20%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAG--KDISATPAVANGVVYFPSWNG 58
WL HG + R++ + IN V +L L WSF G + TP V +G+++ +
Sbjct: 37 WLLHGRTYDESRFSPLKD-INESNVEDLGLAWSFETGTNRGHETTPIVVDGMMFISAPWS 95
Query: 59 YLYAVNAFNGALIW--EQNLSKLTGLSGTGIVVNVTVAV-------------VVAVSRSN 103
++A++ G +W + K + VVN VAV ++++++++
Sbjct: 96 VVFALDPKTGDKLWSFDPQADKAWARNACCDVVNRGVAVWEDQVIIATIDGRLISLNKNS 155
Query: 104 GELVWST-QIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNG 162
GE+ W ID IT + + G +G E + RG ++ DV++G
Sbjct: 156 GEVNWDVLTIDKSKPYTITGAPRIIDGKIIIGNGGGEYGV--------RGYISAYDVQDG 207
Query: 163 RIIWQTYMLPDN------------------GGK---RGGYSGAAVWGS---SPAIDVIRR 198
++W+ + +P N GGK GG G VW S P ++++
Sbjct: 208 SMLWRFFTVPGNPDEPFESEALAKAAETWSGGKWWEVGG--GGTVWDSMAYDPDLNLLYI 265
Query: 199 QKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDC 258
N ++Y +SIVA++ D G W Y T
Sbjct: 266 GTGNGSPWNRYVRSPGGGDNLYLSSIVAINPDDGEYVW---------HYQTT-------- 308
Query: 259 PPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
PG + D + +L I +G R V++ K+GF + DR SG+ I
Sbjct: 309 -PGDSWDYTATQHMILADIEIDGELRKVIMQAPKNGFFYVIDRTSGEFI 356
>gi|357383421|ref|YP_004898145.1| pyrrolo-quinoline quinone [Pelagibacterium halotolerans B2]
gi|351592058|gb|AEQ50395.1| pyrrolo-quinoline quinone [Pelagibacterium halotolerans B2]
Length = 730
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 72/329 (21%), Positives = 126/329 (38%), Gaps = 65/329 (19%)
Query: 20 INPVTVRNLRLRWSFYAGK--DISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLS 77
IN TV +L WS+ G+ P + +G+++ + N Y+ A++A G LIW S
Sbjct: 214 INRDTVADLEPVWSWALGEAGQQEVVPIIHDGIMFVATNNNYVEALDAVTGDLIWSYAHS 273
Query: 78 K-----------------LTGLSGTGIVVNVTVAVVVAVSRSNGELVWSTQIDPRPRSQI 120
+ L +++ A ++A++ G++ W Q++ +
Sbjct: 274 RPEFEGGYHNNQAMRQKNSVALYEDTVILTTVDAKLIALNALTGQVEWEVQVNDWEKGYS 333
Query: 121 TMSGS-VYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNGGKR- 178
+G V G + G S A C + D NG +W+ L D
Sbjct: 334 YTAGPLVADGKIFTGTSGCSIVGTAGGCY-----ITAHDATNGEELWRFNTLADESNPEF 388
Query: 179 ----GGYSGAAVWGSSPAIDVIRRQKQN------------NQTTKPTHPDQCISSDIYAN 222
GG WG++P + N + T+ T + + Y N
Sbjct: 389 EESWGGIPQENRWGATPWATGSYDPELNMVFYGTGMPIPYAEITRGTGDNDVL----YTN 444
Query: 223 SIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTISTNGR 282
S +A+D D+G + W YF L +N D LD+ F M++ +G
Sbjct: 445 STLAIDADTGELVW----------YFQHLPRDNWD------LDSPFER--MIIDAEVDGE 486
Query: 283 FRDVVVAVQ-KSGFAWAFDRDSGDIIWFK 310
R ++V K+G + D ++G+ IW +
Sbjct: 487 TRKMIVTTPGKNGITFGLDAETGEFIWAE 515
>gi|431926573|ref|YP_007239607.1| PQQ-dependent dehydrogenase [Pseudomonas stutzeri RCH2]
gi|431824860|gb|AGA85977.1| PQQ-dependent dehydrogenase, methanol/ethanol family [Pseudomonas
stutzeri RCH2]
Length = 710
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 82/355 (23%), Positives = 135/355 (38%), Gaps = 80/355 (22%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYA----GKDISATPAVANGVVYFPSW 56
WL +G + +R++ + IN V L+ W YA DI TP V +GV+Y+
Sbjct: 45 WLAYGRTHSEQRFSPLKD-INVENVSGLKPEW--YAPLPDRSDIVGTPLVVDGVMYYVGE 101
Query: 57 NGYLYAVNAFNGALIWE-----------QNLSKL-----TGLS--GTGIVVNVTVAVVVA 98
A +A G ++WE N+ K+ GLS G + + ++A
Sbjct: 102 MNRTRAFDARTGKMLWEYDPQVSKEIIDNNMKKVFWKHNRGLSTYGDKLFIATWDGRLIA 161
Query: 99 VSRSNGELVWSTQ-IDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKL 157
++R +G+ VW T+ D IT + G +VG E RG +
Sbjct: 162 ITRKDGKEVWQTRTFDHDQPLNITGHPKAFDGKVFVGNGGTE-------LGPMRGYVTAY 214
Query: 158 DVRNGRIIWQTYMLPDNGGKRGGYSGAA------VW--------GSSPAIDVIRRQKQNN 203
D G+ +W+ Y++P G G+ AA W G A ++ N
Sbjct: 215 DTETGKQVWRFYIVP--GNPADGFEDAAQEMAAKTWTGRWWENGGGGNAWHGWTYDEKYN 272
Query: 204 Q-----------TTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLV 252
Q K PD +++ S+VA+D D+G W
Sbjct: 273 QLIFGTGNGGPWNIKVRSPDG--GDNLFLCSVVAVDADTGEYKW---------------- 314
Query: 253 PNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
+ PG D + +L + +G+ D V+ K+GF + DR +G ++
Sbjct: 315 --HVQTAPGDTWDYNSNMDIVLADLKIDGKDVDAVLHAPKNGFFYTIDRSNGKVL 367
>gi|374369680|ref|ZP_09627702.1| Pyrrolo-quinoline quinone [Cupriavidus basilensis OR16]
gi|373098759|gb|EHP39858.1| Pyrrolo-quinoline quinone [Cupriavidus basilensis OR16]
Length = 718
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 79/349 (22%), Positives = 133/349 (38%), Gaps = 69/349 (19%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSF--YAGKDISATPAVANGVVYFPSWNG 58
W ++G D R++ + IN L L WS+ + + + ATP V +GV+Y +
Sbjct: 69 WPSYGLDYAETRFSQLD-QINTGNAAKLGLAWSYDLESTRGVEATPLVVDGVMYVTAPWS 127
Query: 59 YLYAVNAFNGALIW--EQNLSKLTGLSGTGIVVNVTVAV-------------VVAVSRSN 103
++A++A G +W + + + G G VVN VAV +VA+ +
Sbjct: 128 VVHAIDARTGKRLWTYDPKVPRNLGYRGCCDVVNRGVAVYKGKVFVGAFDGRLVAIDAAT 187
Query: 104 GELVWS--TQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRN 161
G+ W T +D + IT + VY G +G E RG + D
Sbjct: 188 GQKAWEQDTVVDHKFSYTITGAPRVYKGKVIIGNGGAEYGA--------RGYITAYDAET 239
Query: 162 GRIIWQTYMLPDNGGK----------------RGGY----SGAAVWGS---SPAIDVIRR 198
G W+ + +P + K G Y G VW + P ++++
Sbjct: 240 GAQRWRWFTVPGDPAKPFENEAMARAAGTWDPSGKYWLNGGGGTVWNTMAFDPDLNLMYI 299
Query: 199 QKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDC 258
N ++Y S+VAL+ D+G W +
Sbjct: 300 GTGNGAPWSRRLRSPGGGDNLYLASVVALNPDTGEYVW------------------HYQE 341
Query: 259 PPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
PG N D + +L + +G+ R V++ K+GF + DR +G I
Sbjct: 342 TPGDNSDYTSTQDIILADLKIDGQPRKVILHAPKNGFFFVIDRTNGKFI 390
>gi|392384227|ref|YP_005033423.1| methanol PQQ-dependent dehydrogenase, large (alpha) subunit
[Azospirillum brasilense Sp245]
gi|356880942|emb|CCD01910.1| methanol PQQ-dependent dehydrogenase, large (alpha) subunit
[Azospirillum brasilense Sp245]
Length = 627
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 82/365 (22%), Positives = 147/365 (40%), Gaps = 89/365 (24%)
Query: 1 WLNHGGDLNNRRYA-YGEVLINPVTVRNLRLRWSFYAG--KDISATPAVANGVVY----F 53
W + G+ +RY+ ++ N V+NL++ WSF G + P V V+Y F
Sbjct: 36 WASQLGNYAGQRYSPLDQITTN--NVKNLQVAWSFSTGVLRGHEGGPIVVGDVMYIHTPF 93
Query: 54 PSWNGYLYAVNAFN-GALIWE----QNLSKLTGLSGTGIVVNVTVA-----------VVV 97
P+ ++A++ N G +IW+ Q+ + + + + V VA +V
Sbjct: 94 PN---KVFALDLNNPGRVIWKYESVQDPTVIPVMCCDTVNRGVAVADGKVFLAQADNTLV 150
Query: 98 AVSRSNGELVWSTQIDPRPRSQ-ITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAK 156
A+ G+ VW + + + +T + V +VG+S E + RG L
Sbjct: 151 ALDAKTGKEVWKAKNGDHTKGETLTAAPLVVKDKVFVGISGGEFGV--------RGHLTA 202
Query: 157 LDVRNGRIIW----------------QTYML--------------PDNGGKRGGYSGAAV 186
D +G+++W +T M+ P KRGG +
Sbjct: 203 YDTNSGKMVWRAFSTGPDADVKIDPSKTMMMGKPIGQKDLGVSTWPGEEWKRGGGTTWGW 262
Query: 187 WGSSPAIDVIRRQKQNNQTTKPTH----PDQCISSDIYANSIVALDIDSGRIAWAKPLGG 242
+ PA+++I N T PT D+ S + ++ +I A D D+G W
Sbjct: 263 YTYDPALNLIYYGTGNPGTWNPTQRAVDKDRAKSDNKWSMTIFARDPDTGEAKWVYQKTP 322
Query: 243 YDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRD 302
+D + F + N +L I+ NG+ R V+V ++GFA+ DR
Sbjct: 323 FDEWDFDGVNEN------------------ILADINMNGQQRKVLVNFDRNGFAYTLDRA 364
Query: 303 SGDII 307
+G+++
Sbjct: 365 TGELL 369
>gi|374577047|ref|ZP_09650143.1| PQQ-dependent dehydrogenase, methanol/ethanol family
[Bradyrhizobium sp. WSM471]
gi|374425368|gb|EHR04901.1| PQQ-dependent dehydrogenase, methanol/ethanol family
[Bradyrhizobium sp. WSM471]
Length = 611
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 79/356 (22%), Positives = 131/356 (36%), Gaps = 76/356 (21%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAGKD--ISATPAVANGVVYF--PSW 56
W D N RY+ + IN L+L W+F G D A P V +G +Y P
Sbjct: 39 WPMAARDYANTRYSELD-QINASNASRLQLAWTFSVGVDRGQEAAPLVVDGTMYVVGPYA 97
Query: 57 NGY---LYAVNAFNGALIWEQNLSKLTGLSGTG---------------IVVNVTVAVVVA 98
Y ++A++A G L W +G I +N VA
Sbjct: 98 GPYPNRVFALDATTGELKWSYAPKPEPAAAGVACCDVVNRGLAFDNGKIFLNTLDNHTVA 157
Query: 99 VSRSNGELVWSTQIDPRPRSQ-ITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKL 157
+ +G+ +W T++ + + ITM+ V G VG S E + RG + L
Sbjct: 158 IDAKSGKELWHTKLGEINKGETITMAPVVVKGKILVGNSGGEMGV--------RGWVTAL 209
Query: 158 DVRNGRIIWQTYML-PDNG-------------------------GKRGGYSGAAVWGSSP 191
D G I+W+ Y PD R G +WG
Sbjct: 210 DENTGAIMWRAYATGPDKDVLIGDDFKPFYDNLKGKDLGVKTWPADRWQVGGGTMWGWIS 269
Query: 192 AIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCL 251
+ P + +Q ++++ SI A + D+G+ WA + +D+F
Sbjct: 270 YDADLNLIYYGTANPSPWNANQRSGDNLWSASIFARNPDTGQAKWAYQVNPHDLF----- 324
Query: 252 VPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
D D +L+ + NG+ R V++ ++G+ + DR +G++I
Sbjct: 325 -------------DHDEINENVLVDLELNGQPRKVLIHPGRNGYMYVMDRATGEVI 367
>gi|448382968|ref|ZP_21562397.1| PQQ-dependent enzyme-like protein [Haloterrigena thermotolerans DSM
11522]
gi|445660148|gb|ELZ12945.1| PQQ-dependent enzyme-like protein [Haloterrigena thermotolerans DSM
11522]
Length = 569
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 75/337 (22%), Positives = 126/337 (37%), Gaps = 66/337 (19%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFY--AGKDISATPAVANG---VVYFPS 55
WL +GG R EV I P V +L L + G + TP V G V+Y +
Sbjct: 63 WLMYGGSYEQHRATPAEV-ITPENVADLELEYELSVGTGSSMEGTPIVVPGDPPVMYQTN 121
Query: 56 WNGYLYAVNAFNGALIWEQNLSKLTGLS-------------GTGIVVNVTVAVVVAVSRS 102
++ A++ G ++W + G+ G + + + VVA+ R
Sbjct: 122 GPNHMKAIDPREGEILWSYTYAVPMGVELCCDDNNRGAAVHGDTVYMTTLDSGVVALDRY 181
Query: 103 NGELVWSTQI-DPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRN 161
GE W T D T + V+ G Y G + E + G +A +D +
Sbjct: 182 TGEERWYTSTADHEEGYSATWAPVVHDGTIYTGSAGGEYGV--------LGFIAAIDAES 233
Query: 162 GRIIWQTYMLPDN---GGKRGGYSGAAVWGSSPAID---------VIRRQKQNNQTTKPT 209
G I WQT L ++ G R G + W +P ID V + T +P
Sbjct: 234 GEIQWQTDTLLEDEWVGASREHGCGTS-W-MTPTIDEEAGVLYTAVANPGPDFDGTVRP- 290
Query: 210 HPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFG 269
+ ++LD++SG W +D++ + + P
Sbjct: 291 ------GPNFPTCGTISLDLESGEFQWGFQSSPHDVWDYDAVAPRV-------------- 330
Query: 270 EAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDI 306
++ + T+ D+VV K+G+ + D +SGD+
Sbjct: 331 ---LVRDVETDDGSMDMVVGSDKTGWVYMMDAESGDL 364
>gi|347526947|ref|YP_004833694.1| quinohemoprotein alcohol dehydrogenase [Sphingobium sp. SYK-6]
gi|345135628|dbj|BAK65237.1| quinohemoprotein alcohol dehydrogenase [Sphingobium sp. SYK-6]
Length = 715
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 78/352 (22%), Positives = 131/352 (37%), Gaps = 72/352 (20%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRW--SFYAGKDISATPAVANGVVYFPSWNG 58
WL +G +R++ IN V L W + TP V +G++Y +
Sbjct: 50 WLTYGRTYAEQRFS-NLTQINDGNVGELSPAWVVELDTTRGQEGTPIVVDGILYTSTAWS 108
Query: 59 YLYAVNAFNGALIWEQNLSKLTGLSGTGI--VVNVTVAV-------------VVAVSRSN 103
+ AVNA G +W+ + + VVN +AV ++A+
Sbjct: 109 KVVAVNAATGQKLWQFDPENEGSKAAHACCDVVNRGIAVWKGRVYVGTIDGRLIAIDAKT 168
Query: 104 GELVWST-QIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNG 162
G+ VW T +D + ITM+ V +G S E + RG ++ D G
Sbjct: 169 GQKVWETITVDQKKPYTITMAPRVVRDKVIIGNSGAELGV--------RGYVSAYDTATG 220
Query: 163 RIIWQTYMLPDNGGK---------------RGGYSGAAVW---GSSPAIDVIRRQKQNNQ 204
+++W+ Y +P N R +SG W G D + ++ NQ
Sbjct: 221 KLVWRFYTVPGNPADGPDGAASDEAIEKLARPTWSGDNYWKLGGGGTVWDSVVYDQELNQ 280
Query: 205 T-------TKPTHP--DQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNN 255
+ H + +++ +SIVALD D+G+ W +
Sbjct: 281 LLVGVGNGSPWNHKWRSEGKGDNLFLSSIVALDPDTGKYKWHYQVN-------------- 326
Query: 256 PDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
PG D + ML + +G+ R V + K+ F + DR +G +I
Sbjct: 327 ----PGETWDYTATQGIMLADLKIDGKDRKVFMQAPKNAFFYVVDRTNGKLI 374
>gi|398824565|ref|ZP_10582892.1| PQQ-dependent dehydrogenase, methanol/ethanol family
[Bradyrhizobium sp. YR681]
gi|398224812|gb|EJN11107.1| PQQ-dependent dehydrogenase, methanol/ethanol family
[Bradyrhizobium sp. YR681]
Length = 554
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 80/339 (23%), Positives = 137/339 (40%), Gaps = 68/339 (20%)
Query: 2 LNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAGKDIS--ATPAVANGVVYFPSWNGY 59
LN+G N +R++ IN TV+NL W++ D S + P V GV+Y S N
Sbjct: 37 LNYGMGYNLQRFSTLN-QINKDTVKNLVPVWNYSFNDDRSEESQPLVYQGVIYVTSHNAT 95
Query: 60 LYAVNAFNGALIWEQNLS---------------KLTGLSGTGIVVNVTVAVVVAVSRSNG 104
+ AV+A G IW+ + + L + A VVA+ +G
Sbjct: 96 M-AVDAKTGKQIWKSKIEYPAETPRIVCCGIINRGAALYDGKVFRTTLDANVVALDAKDG 154
Query: 105 ELVWSTQI-DPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGR 163
+ +W + D + +T++ V G G+S E RG + D G+
Sbjct: 155 KELWRQKAADIKEGYSMTVAPLVADGVVITGISGAEFGT--------RGFIDGWDPATGK 206
Query: 164 IIWQTYMLP---DNGG--------KRGGYSGAAVWGSSPAIDVIRRQKQN----NQTTKP 208
+W+T+ +P + GG K GG S P ++ + N N +P
Sbjct: 207 HLWRTHSIPSPDEPGGDTWKGDTWKLGGGSTWITGSYDPELNTVYWGIGNPGPFNSAVRP 266
Query: 209 THPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADF 268
++Y S++A+D +G+I W + F+ PNNP D D
Sbjct: 267 -------GDNLYTCSVLAMDPKTGKIKWH--------YQFS---PNNP-------FDYDS 301
Query: 269 GEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
+L ++ G+ V++ ++GF + DR +G ++
Sbjct: 302 VAEMVLADMNVEGKPTKVLMDANRNGFFYVLDRTNGKLL 340
>gi|426404786|ref|YP_007023757.1| serine/threonine protein kinase [Bdellovibrio bacteriovorus str.
Tiberius]
gi|425861454|gb|AFY02490.1| putative serine/threonine protein kinase [Bdellovibrio
bacteriovorus str. Tiberius]
Length = 423
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 51/107 (47%), Gaps = 7/107 (6%)
Query: 20 INPVTVRNLRLRWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKL 79
+ ++N + RW F G DI + YF SW+G++YA+ A GALIW+ L K
Sbjct: 248 MQAYELKNGKARWGFATGSDIKCAALIHGDRAYFSSWDGFIYAIKADTGALIWKTELDKG 307
Query: 80 TGLSGTGIVVNVTVAVVVAVSR------SNGELVWSTQIDPR-PRSQ 119
+S I + TV + + S G+++W I R R+Q
Sbjct: 308 GSMSCPSINADGTVLAITGFMKNFVLETSGGKILWEKAIAGRTSRAQ 354
Score = 38.9 bits (89), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 57/116 (49%), Gaps = 15/116 (12%)
Query: 30 LRWSFYAG---KDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTGLS--- 83
LRW FY+G + I +TP VY + GYL+++N GA+ W G S
Sbjct: 128 LRWQFYSGVSSRGIHSTPLTDEDSVYVGDYAGYLFSLNKDTGAIRWITKTGVTIGSSPFM 187
Query: 84 GTGIV-VNVTVA----VVVAVSRSNGELVWST-QIDPRPRSQITMS---GSVYMGA 130
GI+ V + +A ++A+S +G+ +W++ I P S ++ G + MG+
Sbjct: 188 KDGILYVGIELAKPDGYLLAISARDGKWLWTSPLIGNHPHSSPALNLPHGLILMGS 243
>gi|284163964|ref|YP_003402243.1| PQQ-dependent enzyme-like protein [Haloterrigena turkmenica DSM
5511]
gi|284013619|gb|ADB59570.1| PQQ-dependent enzyme-like protein [Haloterrigena turkmenica DSM
5511]
Length = 569
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 71/329 (21%), Positives = 123/329 (37%), Gaps = 50/329 (15%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFY--AGKDISATPAVANG---VVYFPS 55
WL +GG+ R + LI P TV +L L + G + TP V G V+Y +
Sbjct: 63 WLMYGGNYEQHRVTTAD-LITPDTVSDLELEYELSVGTGSSMEGTPIVVPGDPPVMYQTN 121
Query: 56 WNGYLYAVNAFNGALIWEQNLSKLTGLS-------------GTGIVVNVTVAVVVAVSRS 102
++ A++ G ++W + G+ G + + + VVA++R
Sbjct: 122 GPNHMKAIDPREGEVLWSYTYAVPMGVELCCDDNNRGAAVWGDKVYMTTLDSGVVALNRY 181
Query: 103 NGELVWSTQI-DPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRN 161
GE W T D T + ++ G Y G + E + G A +D +
Sbjct: 182 TGEEEWYTSTADHEVGYSATWAPVIHDGTIYTGSAGGEYGV--------LGFEAAIDAES 233
Query: 162 GRIIWQTYMLPDNG--GKRGGYSGAAVWGSSPAIDVIRRQKQNNQTTKPTHPDQCISS-- 217
G I WQT LP++ G + W +P ID R D +
Sbjct: 234 GEIQWQTDTLPEDEWVGASREHGCGTTW-MTPTIDEERGVLYTAVANPGPDFDGTVRPGP 292
Query: 218 DIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTI 277
+ +ALD++SG W +D++ + + P +L +
Sbjct: 293 NFPTCGTIALDLESGEFQWGFQSSPHDVWDYDAVAPRV-----------------LLRDV 335
Query: 278 STNGRFRDVVVAVQKSGFAWAFDRDSGDI 306
+ ++VV K+G+ + D +SG +
Sbjct: 336 DVDDGPSEMVVGSDKTGWVYMMDAESGQL 364
>gi|333983230|ref|YP_004512440.1| PQQ-dependent dehydrogenase [Methylomonas methanica MC09]
gi|333807271|gb|AEF99940.1| PQQ-dependent dehydrogenase, methanol/ethanol family [Methylomonas
methanica MC09]
Length = 616
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 80/363 (22%), Positives = 133/363 (36%), Gaps = 89/363 (24%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAG--KDISATPAVANGVVY----FP 54
W + GGD RY+ IN V+NL+ WSF G + P V NGV+Y FP
Sbjct: 39 WASWGGDYAGTRYSKLS-QINTQNVKNLQPAWSFSTGVLRGHEGGPLVVNGVLYVHTPFP 97
Query: 55 SWNGYLYAVNAFNGALIWE----------------QNLSKLTGLSGTGIVVNVTVAVVVA 98
+ +YA++ ++IWE +++ I + + V+ A
Sbjct: 98 N---TVYAIDQKTQSVIWEFTPTMDADVTIPVMCCDTVNRGLAYGDGKIFLQQSDTVLTA 154
Query: 99 VSRSNGELVWSTQI-DPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKL 157
+ G+ VWS Q DP+ T + V G+S E + RG LA
Sbjct: 155 LDAKTGKRVWSVQNGDPKLGMTNTNAPIVVKDKVITGISGGEFGV--------RGFLAAY 206
Query: 158 DVRNGRIIWQTY-MLPDNG-----------------------------GKRGGYSGAAVW 187
++R G + W+ Y M PD G + G W
Sbjct: 207 NIRTGALEWKGYSMGPDKDTLIKPGKTTTWQDGKVTPLGPESSLATWQGDQWKIGGGTTW 266
Query: 188 G---SSPAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYD 244
G P ++++ N T P Q + ++ S+ A D D+G + W
Sbjct: 267 GWYSYDPKLNLVYYGSGNPSTWNPV---QRPGDNKWSMSLWARDADTGEVKW-------- 315
Query: 245 IFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSG 304
++ T P D D +L+ G+ +V ++G + DR++G
Sbjct: 316 VYQMT----------PHDEWDYDGINETVLVDQEVKGKMHKTIVHFDRNGVGYTLDRETG 365
Query: 305 DII 307
+++
Sbjct: 366 ELL 368
>gi|440749987|ref|ZP_20929232.1| Glucose dehydrogenase, PQQ-dependent [Mariniradius saccharolyticus
AK6]
gi|436481707|gb|ELP37869.1| Glucose dehydrogenase, PQQ-dependent [Mariniradius saccharolyticus
AK6]
Length = 750
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 77/348 (22%), Positives = 132/348 (37%), Gaps = 69/348 (19%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAGKDISA--TPAVANGVVYFPSWNG 58
W ++GG + +Y + I V L + W F + +P + + V+Y +
Sbjct: 40 WTHYGGSPDQSKY-FDAGEITKENVGQLEIAWHFPTEDETPYFFSPIIVDSVMYVMGKHS 98
Query: 59 YLYAVNAFNGALIWEQNLSKLTGLSGTGI------------VVNVTVAVVVAVSRSNGEL 106
L AVN G IW + L GL+ G+ ++ + A++ GE
Sbjct: 99 SLIAVNVRTGKEIWIH--ANLNGLTRRGLNYWESKDKKDKRLIFTISNTIQAINAETGET 156
Query: 107 VW----STQIDPRP----------RSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRG 152
+ +D R R Q M G ++ +G + P + + G
Sbjct: 157 ILGFGTDGYVDLREGLGREPSSIRRIQPMMPGVIFEDLLIIG------SAPGENYFSAPG 210
Query: 153 SLAKLDVRNGRIIWQTYMLPDNGG------KRGGYS---GAAVWGSSPAIDVIRRQKQNN 203
+ +V G + W + +P G + Y G VW S +ID +R
Sbjct: 211 HVRAYNVVTGNLEWIFHTVPQPGEFGYDTWPKDAYKYVGGTNVW-SEISIDT-QRGIAYL 268
Query: 204 QTTKPTHP---DQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPP 260
PT+ I S+++ NS++ALD +G+ W +D++
Sbjct: 269 PIGSPTYDYYGADRIGSNLFGNSLLALDARTGKRLWHFQTVHHDLW-------------- 314
Query: 261 GPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDIIW 308
D D AP LLT++ G+ D V K GF + FDR +G+ ++
Sbjct: 315 ----DYDIASAPQLLTVNHQGKNVDAVAVATKHGFVFVFDRVTGEPLF 358
Score = 40.0 bits (92), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 46/87 (52%), Gaps = 15/87 (17%)
Query: 222 NSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTISTNG 281
+SIVA D+++G+IAW +P+G ++ + + PG L + +++ G
Sbjct: 621 SSIVAYDLNTGKIAWRRPVGQDSLY----VQGDQSKGAPGGTLRKG-------MIVTSTG 669
Query: 282 RFRDVVVAVQKSGFAWAFDRDSGDIIW 308
VV A K G +AFD D+G+++W
Sbjct: 670 ----VVFATAKGGKLYAFDADNGELLW 692
>gi|167627293|ref|YP_001677793.1| hypothetical protein Fphi_1069 [Francisella philomiragia subsp.
philomiragia ATCC 25017]
gi|167597294|gb|ABZ87292.1| conserved hypothetical protein [Francisella philomiragia subsp.
philomiragia ATCC 25017]
Length = 520
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 97/244 (39%), Gaps = 36/244 (14%)
Query: 22 PVTVRNLRLRWSFYAGKD------ISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQN 75
P ++++WS G + +PA AN +V+ P+ NG Y + NG +IW+ +
Sbjct: 35 PPKEAKVKVKWSRSTGNGNGGLPIYNVSPAYANDMVFVPNQNGMAYGLAITNGKIIWKHD 94
Query: 76 ----LSKLTGLSGTGIVVNVTVAVVVAVSRSNGELVWSTQIDPRPRSQITM-SGSVYMGA 130
LS ++ T + AV + +G+++W T SQ T+ S +Y
Sbjct: 95 TGTILSSQPSTIANAVIFGSTKGTLTAVDQKDGQILWRTDAPSSIFSQPTIYSNHLYTHT 154
Query: 131 FYVGLSSL----------------EEALPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDN 174
++S E LP+D + G ++ T DN
Sbjct: 155 HDGSVTSFDATNGAKVWNVTNNIPEITLPSDSSPIILNDTVMVGSAFGTVLGFTL---DN 211
Query: 175 GGKRGGYSGAAVWGSSPAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRI 234
G + A GSSPA K + T+ P + Y +IVALD D+G++
Sbjct: 212 GDRTINLPIAIAHGSSPA------DKMVDITSNPMLYGNYLIFGAYQGAIVALDRDTGKM 265
Query: 235 AWAK 238
WAK
Sbjct: 266 LWAK 269
>gi|170726605|ref|YP_001760631.1| methanol/ethanol family PQQ-dependent dehydrogenase [Shewanella
woodyi ATCC 51908]
gi|169811952|gb|ACA86536.1| PQQ-dependent dehydrogenase, methanol/ethanol family [Shewanella
woodyi ATCC 51908]
Length = 588
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 78/354 (22%), Positives = 140/354 (39%), Gaps = 81/354 (22%)
Query: 2 LNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAG----KDISATPAVANGVVYFPSWN 57
+++G L +RY+ IN TV+ +R W+F G + + P + +GV+Y
Sbjct: 44 VSYGMGLQGQRYS-PLTKINTSTVKEMRPAWAFSLGGEKQRGQESQPMIKDGVMYITGSY 102
Query: 58 GYLYAVNAFNGALIWEQNLSKLTGLSGTGIVVNVTVAV-------------VVAVSRSNG 104
+YA++A G +W+ + G+ V+N VA+ +VA+++ G
Sbjct: 103 SRVYAIDARTGEELWQYDARLPDGIMPCCDVINRGVALYDDLVIFGTLDAKLVALNKDTG 162
Query: 105 ELVWSTQI-DPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGR 163
++VW ++ D + IT + V G G+S E + G + D +NG+
Sbjct: 163 KVVWKKKVEDYKAGYSITAAPIVVKGKIITGVSGGEFGI--------VGKVRAYDAKNGQ 214
Query: 164 IIWQTYMLP-------------DNG---GKRGGYSGAAVWGSSPA-----------IDVI 196
I+W+ + DNG GK G +W S A +D++
Sbjct: 215 IVWERPTVEGHMGYIWKNGKKVDNGISGGKPGQTWPGDLWKSGGAAPWLGGTYDADVDLL 274
Query: 197 RRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAW---AKPLGGYDIFYFTCLVP 253
N P + + ++ S +A+D D+G+I W P G+D L+P
Sbjct: 275 FFGTGN---PAPWNSHLRPGDNYFSASRLAIDPDTGKIVWHFQTTPHDGWDYDGVNELIP 331
Query: 254 NNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
D+ E G+ ++GF + +R++GD I
Sbjct: 332 ------------FDYKE---------KGKTIKAAATADRNGFFYVLNRENGDFI 364
>gi|448394489|ref|ZP_21568294.1| PQQ-dependent enzyme-like protein [Haloterrigena salina JCM 13891]
gi|445662531|gb|ELZ15299.1| PQQ-dependent enzyme-like protein [Haloterrigena salina JCM 13891]
Length = 569
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 71/329 (21%), Positives = 123/329 (37%), Gaps = 50/329 (15%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFY--AGKDISATPAVANG---VVYFPS 55
WL +GG+ R + LI P TV +L L + G + TP V G V+Y +
Sbjct: 63 WLMYGGNYEQHRVTTAD-LITPDTVSDLELEYELSVGTGSSMEGTPIVVPGDPPVMYQTN 121
Query: 56 WNGYLYAVNAFNGALIWEQNLSKLTGLS-------------GTGIVVNVTVAVVVAVSRS 102
++ A++ G ++W + G+ G + + + VVA++R
Sbjct: 122 GPNHMKAIDPREGEVLWSYTYAVPIGVELCCDDNNRGAAVWGDKVYMTTLDSGVVALNRY 181
Query: 103 NGELVWSTQI-DPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRN 161
GE W T D T + ++ G Y G + E + G A +D +
Sbjct: 182 TGEEEWYTSTADHEVGYSATWAPVIHDGTIYTGSAGGEYGV--------LGFEAAIDAES 233
Query: 162 GRIIWQTYMLPDNG--GKRGGYSGAAVWGSSPAIDVIRRQKQNNQTTKPTHPDQCISS-- 217
G I WQT LP++ G + W +P ID R D +
Sbjct: 234 GEIQWQTDTLPEDEWVGASREHGCGTTW-MTPTIDEERGVLYTAVANPGPDFDGTVRPGP 292
Query: 218 DIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTI 277
+ +ALD++SG W +D++ + + P +L +
Sbjct: 293 NFPTCGTIALDLESGEFQWGFQSSPHDVWDYDAVAPRV-----------------LLRDV 335
Query: 278 STNGRFRDVVVAVQKSGFAWAFDRDSGDI 306
+ ++VV K+G+ + D +SG +
Sbjct: 336 DVDDGPSEMVVGSDKTGWVYMMDAESGQL 364
>gi|338740564|ref|YP_004677526.1| PQQ enzyme repeat protein [Hyphomicrobium sp. MC1]
gi|337761127|emb|CCB66960.1| putative PQQ enzyme repeat protein [Hyphomicrobium sp. MC1]
Length = 572
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 77/357 (21%), Positives = 137/357 (38%), Gaps = 77/357 (21%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFY--AGKDISATPAVANGVVYFPSWNG 58
+L+ G+ + RY G+ IN V LR W F + + TP + V+Y +
Sbjct: 61 FLHTNGNYDQTRYYLGK-QINTGNVAKLRPAWIFQMDVKESLETTPIIVGDVMYVTTSFD 119
Query: 59 YLYAVNAFNGALIW--EQNLSKLT----GLSGTGIVV-------NVTVAVVVAVSRSNGE 105
++YA+NA G W + + +T G + G+ V A +VA+ G
Sbjct: 120 HVYALNAKTGEQYWHYKHKMGPITTYCCGPNNRGVAVYDDKVYLATLDAKLVALDAKTGS 179
Query: 106 LVWSTQI-DPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRI 164
LVW T+I DP TM+ + G +G + E + RG + D + G+
Sbjct: 180 LVWETEIADPEDGYSETMAPTAVNGKIIIGTNGGEYGI--------RGFVRAYDAKTGKQ 231
Query: 165 IWQTYMLPDNGGKRGGYSGAAVWGSSPAIDVIRRQKQNNQTTKPTH-------------- 210
+W +P+N G ++ G D+ + Q +T P
Sbjct: 232 VWNFDTVPEN--TVGVWATKDATGKDLHRDIEAEKAQFAKTGDPYKTLGGGVWQNPAVDL 289
Query: 211 -------------PDQCIS----SDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVP 253
PD S ++Y +S+V++D+D+G+ +D++ F + P
Sbjct: 290 KLNRLFFVVGNPSPDLDGSLRPGDNLYTDSLVSIDLDTGKYVCHLQYIPHDVWDFDAVSP 349
Query: 254 NNPDCPPGPNLDADFGEAPMLLTIS-TNGRFRDVVVAVQKSGFAWAFDRDSGDIIWF 309
P+L+ + +G+ V+ K+GF + +R +I F
Sbjct: 350 ------------------PILVDVKDKDGKVVPGVIHGGKTGFVYVHNRKDCSLIRF 388
>gi|387825194|ref|YP_005824665.1| PQQ (Pyrrolo quinoline) WD40-like repeat, enzyme repeat domain
protein [Francisella cf. novicida 3523]
gi|332184660|gb|AEE26914.1| PQQ (Pyrrolo quinoline) WD40-like repeat, enzyme repeat domain
protein [Francisella cf. novicida 3523]
Length = 441
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 85/225 (37%), Gaps = 48/225 (21%)
Query: 44 PAVANGVVYFPSWNGYLYAVNAFNGALIWEQ----NLSKLTGLSGTGIVVNVTVAVVVAV 99
PA AN V+ P+ NG YA+ NG +IW+ NLS ++ + V+ A+
Sbjct: 49 PAYANDTVFVPNQNGMAYALAITNGKIIWKNDTGTNLSAQPNTIANAVIFSSIKGVLTAI 108
Query: 100 SRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDV 159
+G+ +W T SQ T +Y + Y+ T GS++ D
Sbjct: 109 DDKDGQTLWRTDAPSSIFSQPT----IYDNSIYL--------------QTHDGSVSAFDA 150
Query: 160 RNGRIIWQT------YMLPDN------------GGKRGGYSGAAVWGSSPAIDV------ 195
RNG W LP N G G G V G I++
Sbjct: 151 RNGSKEWSVANNIPEITLPSNSSPVVLNNTVMIGNAFGAVLGFTVKGGDRTINIPIAIAH 210
Query: 196 --IRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAK 238
K + T P D + Y +IVALD D+G++ WAK
Sbjct: 211 GSSPADKMVDITANPMLYDHYLIFAAYQGAIVALDKDNGKMLWAK 255
>gi|408675290|ref|YP_006875038.1| PQQ-dependent enzyme [Emticicia oligotrophica DSM 17448]
gi|387856914|gb|AFK05011.1| PQQ-dependent enzyme [Emticicia oligotrophica DSM 17448]
Length = 700
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 75/344 (21%), Positives = 137/344 (39%), Gaps = 76/344 (22%)
Query: 10 NRRYAYGEVLINPVTVRNLRLRWSFYAGK--DISATPAVANGVVYFPSWNGYLYAVNAFN 67
+R + I P V L++ W++ + P + +G++Y + + +A++A
Sbjct: 37 DRNHYSKLTQITPENVNQLKIAWTYTTPDSGQMQVNPIIVDGILYGVTASVQAFALDAAT 96
Query: 68 GALIWE--------QNLSKLTGLSGTGIVVNVTVAV---VVAVSRSNGELVWS------- 109
G IW + S+ GI + V + A+ NG+ + S
Sbjct: 97 GKEIWRFGDPLKNWASTSRGVSYWSNGIEKRILYTVGPNLWALDAKNGKPIKSFGNEGKV 156
Query: 110 ---TQIDPRPRSQITMS---GSVY--MGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRN 161
T + P +++ +S G+V+ + V LS E+A P D + DV+
Sbjct: 157 DLHTGLPPIAQNKFIISNTPGTVFEDLIVMPVRLSEGEDAAPGD--------IRAFDVKT 208
Query: 162 GRIIWQTYMLP----------DNGGKRGGYSGAAVWGSSPAIDVIRRQKQNNQTTKPT-- 209
G+++W + +P + Y+GAA + A+D ++ PT
Sbjct: 209 GKLVWTFHTIPYPNEFGYETFPKDAYKNEYTGAANNWAGMAVD-----RKRGIIFVPTGS 263
Query: 210 -----HPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNL 264
+ +++AN ++ALD +G+ W +DI+
Sbjct: 264 AGYDFYGGNRNGKNLFANCLLALDARTGKRIWHFQTTHHDIW------------------ 305
Query: 265 DADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDIIW 308
D D P L+TI+ NG+ DVV V K G+ + FDR +G I+
Sbjct: 306 DRDLPAPPNLMTINQNGKKIDVVAQVTKQGYVFVFDRVTGKPIF 349
>gi|334133041|ref|ZP_08506796.1| PQQ-linked dehydrogenase XoxF2 [Methyloversatilis universalis FAM5]
gi|333441951|gb|EGK69923.1| PQQ-linked dehydrogenase XoxF2 [Methyloversatilis universalis FAM5]
Length = 600
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 73/362 (20%), Positives = 141/362 (38%), Gaps = 88/362 (24%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAG--KDISATPAVANGVVY----FP 54
W G+ N+RY+ IN V+N+++ W+F G + P V G+++ FP
Sbjct: 37 WAMQAGNFENQRYSTLN-QINKSNVKNMKVAWTFSTGVLRGHEGGPLVIGGMLFVHTPFP 95
Query: 55 SWNGYLYAVNAFNGALIWE---------------QNLSKLTGLSGTGIVVNVTVAVVVAV 99
+ ++A++ ++W+ +++ + I++ V+VA+
Sbjct: 96 N---KVFAIDLETQKIVWKYEPKQDPTVIPVMCCDTVNRGLAYAEGKILLQQADTVLVAL 152
Query: 100 SRSNGELVWSTQI-DPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLD 158
G+ +W + DP+ T + V+ G+S E + RG + D
Sbjct: 153 DAKTGKKLWDVKNGDPKIGETNTQAPHVFKDKVITGISGGEFGV--------RGRVTAYD 204
Query: 159 VRNGRIIWQTY-------MLPD--------NG---------------GKRGGYSGAAVWG 188
+ G+++W+ Y ML D NG G + G + WG
Sbjct: 205 LNTGKMVWKGYSTGPDAEMLMDPEKTMTWTNGKMAPVGKDSSLKTWQGDQWKIGGGSTWG 264
Query: 189 ---SSPAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDI 245
P +++ N T P+ Q + ++ ++ A D+D+G++ W +
Sbjct: 265 WYSYDPQENLMYYGTGNPSTWNPS---QRPGDNKWSMTLWARDVDTGKVRW--------V 313
Query: 246 FYFTCLVPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGD 305
+ T P D D +L I G+ R V V ++GFA+ DR +G+
Sbjct: 314 YQMT----------PHDEWDFDGVNEVILADIDVKGKKRKVAVHFDRNGFAYTLDRVTGE 363
Query: 306 II 307
++
Sbjct: 364 LL 365
>gi|27381318|ref|NP_772847.1| quinoprotein ethanol dehydrogenase [Bradyrhizobium japonicum USDA
110]
gi|27354485|dbj|BAC51472.1| exaA [Bradyrhizobium japonicum USDA 110]
Length = 554
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 79/339 (23%), Positives = 137/339 (40%), Gaps = 68/339 (20%)
Query: 2 LNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAGKDIS--ATPAVANGVVYFPSWNGY 59
LN+G N +R++ IN TV+NL W++ D S + P V GV+Y S N
Sbjct: 37 LNYGMGYNLQRFSTLN-QINKDTVKNLVPVWNYSFNDDRSEESQPLVYQGVIYVTSHNAT 95
Query: 60 LYAVNAFNGALIWEQNLS---------------KLTGLSGTGIVVNVTVAVVVAVSRSNG 104
+ AV+A G IW+ + + L + A V+A+ +G
Sbjct: 96 M-AVDAKTGKQIWKSKIEYPAETPRIVCCGIINRGAALYDGKVFRTTLDANVIALDAKDG 154
Query: 105 ELVWSTQI-DPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGR 163
+ +W + D + +T++ V G G+S E RG + D G+
Sbjct: 155 KELWRQKAADIKEGYSMTVAPLVADGVVITGISGAEFGT--------RGFIDGWDPATGK 206
Query: 164 IIWQTYMLP---DNGG--------KRGGYSGAAVWGSSPAIDVIRRQKQN----NQTTKP 208
+W+T+ +P + GG K GG S P ++ + N N +P
Sbjct: 207 HLWRTHSIPSPDEPGGDTWKGDTWKLGGGSTWITGSYDPELNTVYWGIGNPGPFNSAVRP 266
Query: 209 THPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADF 268
++Y S++A+D +G+I W + F+ PNNP D D
Sbjct: 267 -------GDNLYTCSVLAMDPKTGKIKWH--------YQFS---PNNP-------FDYDS 301
Query: 269 GEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
+L ++ G+ V++ ++GF + DR +G ++
Sbjct: 302 VAEMVLADMNVEGKPTKVLMDANRNGFFYVLDRTNGKLL 340
>gi|389693484|ref|ZP_10181578.1| PQQ-dependent dehydrogenase, methanol/ethanol family [Microvirga
sp. WSM3557]
gi|388586870|gb|EIM27163.1| PQQ-dependent dehydrogenase, methanol/ethanol family [Microvirga
sp. WSM3557]
Length = 602
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 77/338 (22%), Positives = 131/338 (38%), Gaps = 79/338 (23%)
Query: 20 INPVTVRNLRLRWSFYAG--KDISATPAVANGVVYFPS-WNGYLYAVNAFN--GALIWEQ 74
IN V+NL++ ++F AG K A P V G +Y S + LYA++ L W+
Sbjct: 63 INTENVKNLQVAFTFSAGVNKGQEAAPLVVGGTMYVLSPFPNILYALDLTQPGAPLKWQY 122
Query: 75 NLSKLTGLSGTG---------------IVVNVTVAVVVAVSRSNGELVWSTQIDPRPRSQ 119
N + G IV A VVAV+ GE VW T++ R +
Sbjct: 123 NPKPASAAQGVACCDVVNRGPAFANGRIVFTTLDAHVVAVNAETGEEVWKTRLGDITRGE 182
Query: 120 -ITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYML------- 171
+TM+ V VG+S + + RG + +D+ +G+ +W+ Y
Sbjct: 183 TMTMAPLVVKDKVIVGVSGGQFGV--------RGWIEAIDINSGKSVWKAYSTGPDQDVK 234
Query: 172 ----------------------PDNGGKRGGYSGAAVWGSSPAIDVIRRQKQNNQTTKPT 209
P +G ++GG + + P +++I N P
Sbjct: 235 IGPNFKPFYDGDKGQDLGVTTWPADGWQQGGGTVSGWLSYDPDLNLIYHGTGN---PGPW 291
Query: 210 HPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFG 269
+P+ + + I A D D+G W F + P++ G N
Sbjct: 292 NPNPRPGDNKWTAGIFARDADTGEARW-----------FYQIAPHDLHGRSGDN------ 334
Query: 270 EAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
+LL + G+ R V+V ++GF + DR +G+++
Sbjct: 335 -ETILLDMEWEGKPRKVLVHPGQTGFVYVIDRTNGELL 371
>gi|119475097|ref|ZP_01615450.1| Alcohol dehydrogenase large subunit [marine gamma proteobacterium
HTCC2143]
gi|119451300|gb|EAW32533.1| Alcohol dehydrogenase large subunit [marine gamma proteobacterium
HTCC2143]
Length = 714
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 78/346 (22%), Positives = 133/346 (38%), Gaps = 66/346 (19%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAG--KDISATPAVANGVVYFPSWNG 58
WL+HG + +R++ +N V L + WS+ G + I TP V NGV+Y S
Sbjct: 54 WLSHGRTYSEQRHS-PLTGVNTKNVAELGVLWSYDLGTSRGIETTPIVHNGVMYVTSTWN 112
Query: 59 YLYAVNAFNGALIWEQN--LSKLTGLSGTGIVVNVTVAV-------------VVAVSRSN 103
++A++A G +W + + K VVN VA+ +++++ +
Sbjct: 113 IVHALDAKTGLKLWTFDPVVDKTQASKACCDVVNRGVALWGDSVFTATIDGRLISLNATT 172
Query: 104 GELVWSTQ-IDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNG 162
G+ W ID IT + + G +G E + RG ++ D G
Sbjct: 173 GDTNWDINTIDKTKSYTITGAPRIINGMVIIGNGGAELGV--------RGYISAYDAETG 224
Query: 163 RIIWQTYMLPDNGGK--------------RGGY----SGAAVWGS---SPAIDVIRRQKQ 201
IW+ Y +P N G Y G W S P +D++
Sbjct: 225 EQIWRFYTVPGNPADGFENKTMEMAAKTWNGEYWAAGGGGTAWDSMAYDPELDLLYVGVG 284
Query: 202 NNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPG 261
N + +++ +SIVA+ +G W Y T PG
Sbjct: 285 NGSPWNQSIRSPGGGDNLFLSSIVAVRPATGEYVW---------HYQTT---------PG 326
Query: 262 PNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
D + +L ++ +G R V++ K+GF + DR++G+ I
Sbjct: 327 ETWDYTATQHMILAELNIDGIERKVIMQAPKNGFFYVIDRETGEFI 372
>gi|288817711|ref|YP_003432058.1| methanol dehydrogenase subunit 1 [Hydrogenobacter thermophilus
TK-6]
gi|384128472|ref|YP_005511085.1| PQQ-dependent dehydrogenase [Hydrogenobacter thermophilus TK-6]
gi|288787110|dbj|BAI68857.1| methanol dehydrogenase subunit 1 [Hydrogenobacter thermophilus
TK-6]
gi|308751309|gb|ADO44792.1| PQQ-dependent dehydrogenase, methanol/ethanol family
[Hydrogenobacter thermophilus TK-6]
Length = 623
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 81/364 (22%), Positives = 140/364 (38%), Gaps = 81/364 (22%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAG--KDISATPAVANGVVYFPS-WN 57
W G D + RY+ IN V+NL L WSF G + P V +Y + +
Sbjct: 40 WPAPGRDYHLTRYS-PLSQINTHNVKNLDLAWSFSTGVLRGHEGQPLVIGNTMYVQTAYP 98
Query: 58 GYLYAVNAFNG---ALIWE---------------QNLSKLTGLSGTGIVVNVTVAVVVAV 99
+YA++ G ++W+ + + + IV+N V+A+
Sbjct: 99 NIVYALDISKGNDYKILWKYVPQQDDRAVAVACCDTVMRGISYADGKIVMNTLDGHVIAL 158
Query: 100 SRSNGELVWSTQ-IDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLD 158
G+ +W + DP ITM+ V VG+S E + RG +A D
Sbjct: 159 DAKTGKELWKVKHADPYKGETITMAPIVAKDKVIVGISGGEFGV--------RGRVAAYD 210
Query: 159 VRNGRIIWQTYML-PDNG--------------------GKRGGYSGAAVWG---SSPAID 194
+ +GR +W Y PD G + GA VWG P ++
Sbjct: 211 LNSGRRVWLCYNQGPDQDMCYGSRTPASYKGLGVNTWQGDQWKIGGATVWGWFSYDPKLN 270
Query: 195 VIRRQKQNNQTTKP-----THPDQCIS---SDIYANSIVALDIDSGRIAWAKPLGGYDIF 246
++ N T P ++C S + ++ SI+A D D+G + WA + +D +
Sbjct: 271 LVYYGTSNPGTWNPYIRCSASWEECQSGRYDNKWSTSIIARDADTGELVWAFQMTPFDQW 330
Query: 247 YFTCLVPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDI 306
D D +LL ++ + ++ ++GFA+ +R +G++
Sbjct: 331 ------------------DYDGVNESILLDVNVGSKKVPALIHFDRNGFAFLLNRATGEL 372
Query: 307 IWFK 310
I+ K
Sbjct: 373 IYAK 376
>gi|2055286|dbj|BAA19753.1| dehydrogenase subunit precursor of membrane-bound alcohol
dehydrogenase [Gluconobacter oxydans]
Length = 757
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 72/358 (20%), Positives = 130/358 (36%), Gaps = 78/358 (21%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFY--AGKDISATPAVANGVVYFPSWNG 58
WL++G + +RY+ + IN V L+L W + + TP + NGV+Y +
Sbjct: 54 WLSYGRSYSEQRYSPLD-QINTENVGKLKLAWHYDLDTNRGQEGTPLIVNGVMYATTNWS 112
Query: 59 YLYAVNAFNGALIWEQNLSKLTGLSGTGIVVNVTVAV---------------VVAVSRSN 103
+ A++A G L+W + ++ G V+ ++A+
Sbjct: 113 KMKALDAATGKLLWSYDPKVPGNIADRGCCDTVSRGAAYWNGKVYFGTFDGRLIALDAKT 172
Query: 104 GELVWSTQIDPRP-----RSQITMSGS--VYMGAFYVGLSSLEEALPADQCCTFRGSLAK 156
G+LVWS P+ + T+ G+ + G +G E RG ++
Sbjct: 173 GKLVWSVYTIPKEAQLGHQRSYTVDGAPRIAKGKVLIGNGGAEFGA--------RGFVSA 224
Query: 157 LDVRNGRIIWQTYMLPD------------------------NGGKRGGYSGAAVWGS--- 189
D ++ W+ + +P+ NG + G VW S
Sbjct: 225 FDAETSKLDWRFFTVPNPENKPDGAASDDILMSKAYPTWGKNGAWKQQGGGGTVWDSLVY 284
Query: 190 SPAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFT 249
P D++ N + +++ SIVA++ D+G+ W D + +T
Sbjct: 285 DPVTDLVYLGVGNGSPWNYKFRSEGKGDNLFLGSIVAINPDTGKYVWHFQETPMDEWDYT 344
Query: 250 CLVPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
+ + M L + NG R V+V K+GF + D +G I
Sbjct: 345 SV------------------QQIMTLDMPVNGEMRHVIVHAPKNGFFYIIDAKTGKFI 384
>gi|347527611|ref|YP_004834358.1| quinohemoprotein alcohol dehydrogenase [Sphingobium sp. SYK-6]
gi|345136292|dbj|BAK65901.1| quinohemoprotein alcohol dehydrogenase [Sphingobium sp. SYK-6]
Length = 708
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 79/352 (22%), Positives = 137/352 (38%), Gaps = 74/352 (21%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRW--SFYAGKDISATPAVANGVVY-FPSWN 57
WL+ G + +R++ + INP V L + W + + ATP A+GV+Y WN
Sbjct: 50 WLHDGRTYSAQRFSPLD-QINPGNVSRLGIAWYDDLDTYRGVEATPLYADGVLYNILPWN 108
Query: 58 GYLYAVNAFNGALIWE---------------QNLSKLTGLSGTGIVVNVTVAVVVAVSRS 102
A +A G +W + +++ + I++ ++ +
Sbjct: 109 -VTVAYDARTGKRLWTYDPEVPREYGRYACCEPVARGLAMWNGKIIIATLDGRLIGLDAR 167
Query: 103 NGELVWSTQIDP--RPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVR 160
+G+ VWS Q P P S IT + V+ G VG S + + RG ++ D
Sbjct: 168 SGKPVWSVQTTPDDMPYS-ITGAPRVFDGKVVVGNSGGDLGI--------RGFVSAWDAD 218
Query: 161 NGRIIWQTYMLPDNGGK------------------RGGY----SGAAVWGS---SPAIDV 195
GR +W+ ++ P + K G Y GA W S P +++
Sbjct: 219 TGRKLWKFFLTPGDPAKGPDGEASDDIMAMIRKTWAGDYWKLGGGANAWDSIAYDPKLNL 278
Query: 196 IRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNN 255
+ N H +++ SIVALD +G+ W + + + +TC +
Sbjct: 279 VYIGTGNGSPLAWHHRSASKGDNLFICSIVALDATTGKYKWHYQMVPEEDWDYTCTMSM- 337
Query: 256 PDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
+ AD + GR R V++ K+GF + DR +G +I
Sbjct: 338 --------ISAD---------LKIKGRTRQVIMQAPKNGFFYVLDRKTGALI 372
>gi|347527614|ref|YP_004834361.1| quinohemoprotein alcohol dehydrogenase [Sphingobium sp. SYK-6]
gi|345136295|dbj|BAK65904.1| quinohemoprotein alcohol dehydrogenase [Sphingobium sp. SYK-6]
Length = 702
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 71/350 (20%), Positives = 134/350 (38%), Gaps = 70/350 (20%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRW--SFYAGKDISATPAVANGVVYFPSWNG 58
W ++ + +RY+ + IN ++L L W + + A+P V +GV+Y +
Sbjct: 52 WASYSRTWDEQRYSPLD-QINDGNAQDLGLAWYDDLETYRGVQASPLVIDGVLYNETIFN 110
Query: 59 YLYAVNAFNGALIWEQNL---SKLTGLS------------GTGIVVNVTVAVVVAVSRSN 103
+ A +A G +W + + GL+ G I++ ++A+ R +
Sbjct: 111 VVTAYDARTGRKLWTYDPGVGKEWAGLACCGPSSRGIAAWGNSIIIGALDGRLIAIDRHS 170
Query: 104 GELVWSTQ-IDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNG 162
G+ +WS Q D + + IT + VY G +G + RG + D G
Sbjct: 171 GKEIWSAQTFDRKDQYSITGAPRVYDGKVIIGNGGADYG--------SRGFVVAYDAATG 222
Query: 163 RIIWQTYMLPDNGGK------------------RGGY----SGAAVWGS---SPAIDVIR 197
+ +W+ Y++P + K G + G W S P ++++
Sbjct: 223 KRLWKFYIVPTDPAKGPDGEASDSAMRIAQPTWHGKFWEAGGGGNAWDSFAYDPKLNLVY 282
Query: 198 RQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPD 257
N + +++ SIVA+D +G W + + + +TC P
Sbjct: 283 IGTGNGSPHMWHFRSEGKGDNLFLCSIVAVDATTGAYKWHYQMVPEEDWDYTCTQPM--- 339
Query: 258 CPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
+L + GR R V++ K+GF + DR +G +I
Sbjct: 340 ---------------VLADLKIKGRTRQVIMQAPKNGFFYVLDRGTGQLI 374
>gi|347527113|ref|YP_004833860.1| quinohemoprotein alcohol dehydrogenase [Sphingobium sp. SYK-6]
gi|345135794|dbj|BAK65403.1| quinohemoprotein alcohol dehydrogenase [Sphingobium sp. SYK-6]
Length = 721
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 79/348 (22%), Positives = 135/348 (38%), Gaps = 67/348 (19%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRW--SFYAGKDISATPAVANGVVYFPSWNG 58
W+ GGD+ Y+ I+ L L W + G+ + ATP V +GV+Y G
Sbjct: 26 WVTPGGDIGKSHYST-LTDIDTGNADRLGLAWEAALGTGRGLEATPLVIDGVMYTSGVAG 84
Query: 59 YLYAVNAFNGALIW--EQNLSKLTGLSGTGIVVNVTVAV-------------VVAVSRSN 103
+YA +A +G +W E + + +VN VAV + A+ +
Sbjct: 85 RVYAFDAASGRELWRFEPEIDMQVNRTVCCDMVNRGVAVARGKVYVASLDGWMYALDAKS 144
Query: 104 GELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGR 163
G ++W + I T +G+ + V + + A RG+++ D+ G+
Sbjct: 145 GTVLWKSDIVVDRARGDTSTGAPEIAGNVVVIGN------AGAEYDVRGAVSAFDLETGK 198
Query: 164 IIWQTYMLP--------------------DNGGKRGGYSGAAVWGS---SPAIDVIRRQK 200
+ W+ +++P D + G A W + P ++
Sbjct: 199 LAWRFFVVPRDPALGPQDHPDLEPAVKTWDPQSRWDIGGGGAPWDAINYDPETGLVLVGT 258
Query: 201 QNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPP 260
N + ++Y +SIVALD +GR+ W Y P
Sbjct: 259 GNGGPYATSRRSPKGGDNLYLSSIVALDAKTGRLRW---------HYQET---------P 300
Query: 261 GPNLDADFGEAPMLLT-ISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
G N D APM+LT ++ +G R VV+ K+GF + DR G ++
Sbjct: 301 GDNWDY-TATAPMILTRMTVDGEERPVVLHAPKNGFLYVLDRRDGKLL 347
>gi|448365593|ref|ZP_21553973.1| alcohol dehydrogenase [Natrialba aegyptia DSM 13077]
gi|445655132|gb|ELZ07979.1| alcohol dehydrogenase [Natrialba aegyptia DSM 13077]
Length = 569
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 72/330 (21%), Positives = 125/330 (37%), Gaps = 52/330 (15%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFY--AGKDISATPAVANG---VVYFPS 55
WL +GG+ R +V I P V +L L + G + TP V G ++Y +
Sbjct: 63 WLMYGGNYEQHRATTADV-ITPDNVSDLELEYELSVGTGSSMEGTPIVVPGDPPIMYQTN 121
Query: 56 WNGYLYAVNAFNGALIWEQNLSKLTGLS-------------GTGIVVNVTVAVVVAVSRS 102
++ A++ G ++W + G+ G + + + +VA++R
Sbjct: 122 GPNHMKAIDPREGEVLWSYTYAPPIGVELCCDDNNRGAAVLGDTVYMTTLDSGIVALNRY 181
Query: 103 NGELVWSTQI-DPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRN 161
GE W TQ D T + +Y G Y G + E + G +A LD +
Sbjct: 182 TGEEEWHTQTADHEVGYSATWAPVIYDGTLYTGSAGGEYGV--------LGFIAGLDAES 233
Query: 162 GRIIWQTYMLPDN---GGKRGGYSGAAVWGSSPAIDVIRRQKQNNQTTKPTHPDQCISS- 217
G + W+ L ++ G R G + W +P ID R + D +
Sbjct: 234 GDMQWKCDTLLEDEWVGASREHGCGTS-W-MTPTIDEDRGVLYSPVANPGPDFDGTVRPG 291
Query: 218 -DIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLT 276
+ ++LD++SG W +D++ + P ++
Sbjct: 292 PNFPTCGTLSLDLESGEFNWGFQSSPHDVWDYDAAAPRV-----------------LVPD 334
Query: 277 ISTNGRFRDVVVAVQKSGFAWAFDRDSGDI 306
+S G D+VV KSG+ + D DSG +
Sbjct: 335 VSVEGESMDLVVGSDKSGWVYMMDADSGKL 364
>gi|300710322|ref|YP_003736136.1| PQQ-dependent enzyme-like protein [Halalkalicoccus jeotgali B3]
gi|448294648|ref|ZP_21484727.1| PQQ-dependent enzyme-like protein [Halalkalicoccus jeotgali B3]
gi|299124005|gb|ADJ14344.1| PQQ-dependent enzyme-like protein [Halalkalicoccus jeotgali B3]
gi|445586325|gb|ELY40607.1| PQQ-dependent enzyme-like protein [Halalkalicoccus jeotgali B3]
Length = 543
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 68/330 (20%), Positives = 128/330 (38%), Gaps = 50/330 (15%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRW--SFYAGKDISATPAVANG---VVYFPS 55
WL +GG+ R+ E+ I P V L L + S +G + TP + G ++Y +
Sbjct: 38 WLVYGGNYEQHRHTTCEI-ITPENVGELELEYEMSVGSGSSMEGTPLIVPGDPPIMYQSN 96
Query: 56 WNGYLYAVNAFNGALIWE-------------QNLSKLTGLSGTGIVVNVTVAVVVAVSRS 102
++ A++ G ++W + ++ + + + + VVA+ R
Sbjct: 97 GPNHIKAIDPREGEVLWSYTYAVPNDVVLCCDDNNRGPAVYEDQVFMTTLDSGVVALDRY 156
Query: 103 NGELVWSTQIDPRPRS-QITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRN 161
+GE W R T + VY G + G + E + RG +DV +
Sbjct: 157 SGEEQWYHSTADHERGYSATWAPQVYEGTLFTGSAGGEYGV--------RGFHTAIDVES 208
Query: 162 GRIIWQTYMLPDNG--GKRGGYSGAAVWGSSPAIDVIRRQKQNNQTTKPTHPDQCISSDI 219
G W T + P+ G SG W + +D R + D +
Sbjct: 209 GDEAWSTLLSPETEWVGDSINQSGTTNWMGA-TVDEQRGKLYLPMGNPGPDFDGSVRPGP 267
Query: 220 YANSI--VALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTI 277
NSI + LD+++G W +D++ + +P ++ +
Sbjct: 268 NRNSIGTLCLDMETGEHEWFHQESAHDVWDYDSAMPR-----------------ILIRDV 310
Query: 278 STNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
G+ RDV V+V K+G+ + D ++G+++
Sbjct: 311 EIRGKERDVTVSVGKTGWLYTTDAETGELL 340
>gi|52548995|gb|AAU82844.1| serine/threonine protein kinase related protein [uncultured
archaeon GZfos1D1]
Length = 453
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 71/150 (47%), Gaps = 17/150 (11%)
Query: 30 LRWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNL----SKLTGLSGT 85
L+W + G I ++PAV+ G+VYF S + Y YA++A GAL W+ + S L+
Sbjct: 138 LKWKYETGDKIRSSPAVSGGIVYFISLDDYWYALDAATGALKWKYDTDYGGSGLSPAVSG 197
Query: 86 GIVVNVTVAVVVAVSRSNGELVWSTQIDPRPRSQ-ITMSGSVYMGAFYVGLSSLEEALPA 144
GI + V+A+ + G + W ++ + +SG + YVG + ++ +
Sbjct: 198 GIFYGELIGDVIALDAATGVIEWKYDMNLYNSVDFLVVSGDI----IYVGSNYNVGSISS 253
Query: 145 DQCCTFRGSLAKLDVRNGRIIWQTYMLPDN 174
D C LD G + W+ +L DN
Sbjct: 254 DLCA--------LDAATGTLKWKYEILEDN 275
Score = 46.2 bits (108), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 60/121 (49%), Gaps = 8/121 (6%)
Query: 28 LRLRWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQN----LSKLTGLS 83
L L W Y + S++PAV+ GVVY S++ +YA +A G+L W+ ++ +S
Sbjct: 57 LELIWK-YKHVEFSSSPAVSGGVVYVGSYDNNIYAFDATTGSLKWKYETGDYVTSSPAVS 115
Query: 84 GTGIVVNVTVAVVVAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALP 143
G + V A + A++ + G L W + + RS +SG + +++ L AL
Sbjct: 116 GGVVYVGSHDANIYALNAATGALKWKYETGDKIRSSPAVSGGI---VYFISLDDYWYALD 172
Query: 144 A 144
A
Sbjct: 173 A 173
>gi|390959695|ref|YP_006423452.1| glucose dehydrogenase [Terriglobus roseus DSM 18391]
gi|390414613|gb|AFL90117.1| glucose dehydrogenase [Terriglobus roseus DSM 18391]
Length = 530
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 72/333 (21%), Positives = 133/333 (39%), Gaps = 59/333 (17%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAG-------KDISATPAVANGVVYF 53
W + GD + RR++ IN V++L L W + + ++ TP V NGV+Y
Sbjct: 41 WPTYNGDYSGRRFS-ALTQINDKNVKSLSLAWLYQLPNLGDGLVRRLAGTPVVVNGVIYI 99
Query: 54 PSWNGYLYAVNAFNGALIWEQNLS---------KLTGLSGTGIVVNVTVAVVVAVSRSNG 104
+ +++A++A +W + + G+SG + +VA++ ++G
Sbjct: 100 -TVPDHVWAIDARTSKPLWHYAWTSKGGIHLGNRGVGISGDSVYFETPDCNLVALNIADG 158
Query: 105 ELVWSTQI-DPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGR 163
+ +WS I D +++ V G+S + P G L D R G
Sbjct: 159 KKLWSQSICDLDQMYYASVAPLVVKDHVITGVSGDDLDRP--------GYLEAHDPRTGA 210
Query: 164 IIWQTYMLPDNG---------GKRGGYSGAAVWGS---SPAIDVIRRQKQNNQTTKPTHP 211
+ W+ ++P G + G W S PA++++ N Q
Sbjct: 211 LQWRWSVVPKPGEPGSETWPNADAMAHGGGMTWISPTYDPALNLVYIGTGNPQPVIAASG 270
Query: 212 DQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEA 271
+++Y SIVAL D+G++AW YF P D D +
Sbjct: 271 RN--GANLYTESIVALHADTGKMAW----------YF--------QPSPHDTHDWDAVQT 310
Query: 272 PMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSG 304
P+L G+ + ++ ++G+ + DR++G
Sbjct: 311 PILFDGVIEGKPQKLLAQASRNGWFFVLDRETG 343
>gi|381151332|ref|ZP_09863201.1| PQQ-dependent dehydrogenase, methanol/ethanol family
[Methylomicrobium album BG8]
gi|380883304|gb|EIC29181.1| PQQ-dependent dehydrogenase, methanol/ethanol family
[Methylomicrobium album BG8]
Length = 612
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 82/363 (22%), Positives = 136/363 (37%), Gaps = 89/363 (24%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAG--KDISATPAVANGVVY----FP 54
W GG+ RY+ IN V+NL+ WSF G + P V N V+Y FP
Sbjct: 40 WSMWGGNYAGTRYSELS-QINAGNVKNLQPAWSFSTGVLRGHEGGPLVVNDVLYIHTPFP 98
Query: 55 SWNGYLYAVNAFNGALIWEQNLSKLTGLS---------------GTG-IVVNVTVAVVVA 98
+ ++A++ A+IWE ++ ++ G G I + + V+ A
Sbjct: 99 N---TVFAIDQKTQAIIWEYTPTQDADVTVPVMCCDTVNRGLAYGDGKIFLQQSDTVLTA 155
Query: 99 VSRSNGELVWSTQI-DPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKL 157
+ G+ VWS Q DP+ T S V G+S E + RG LA
Sbjct: 156 LDAKTGKRVWSVQNGDPKLGMTNTQSPLVVKDKVLTGISGGEFGV--------RGFLAAY 207
Query: 158 DVRNGRIIWQTY-MLPDNG-----------------------------GKRGGYSGAAVW 187
D++ G++ W+ Y M PD G + G W
Sbjct: 208 DIKTGQLAWKGYSMGPDADTLIDPNKTTAWKDGKVQPVGPNSSTSTWEGDQWKIGGGTTW 267
Query: 188 G---SSPAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYD 244
G P ++++ N T P Q + ++ S+ A D D+G + W
Sbjct: 268 GWYSYDPKLNLVYYGSGNPSTWNPA---QRPGDNKWSMSLWARDADTGAVKW-------- 316
Query: 245 IFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSG 304
++ T P D D +L+ G+ +V ++GF + DR++G
Sbjct: 317 VYQMT----------PHDEWDYDGINETVLVDQEVKGKPHKTIVHFDRNGFGYTLDRETG 366
Query: 305 DII 307
+++
Sbjct: 367 ELL 369
>gi|365879597|ref|ZP_09419011.1| putative dehydrogenase xoxF precursor [Bradyrhizobium sp. ORS 375]
gi|365292369|emb|CCD91542.1| putative dehydrogenase xoxF precursor [Bradyrhizobium sp. ORS 375]
Length = 630
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 81/359 (22%), Positives = 136/359 (37%), Gaps = 82/359 (22%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAGKD--ISATPAVANGVVYFPS--- 55
W D N RY+ + IN L+L W+F G D A P + +G +Y
Sbjct: 41 WPMPARDYANTRYSALD-QINTGNAGQLQLAWTFSVGVDRGQEAAPIIIDGTMYVVGPYD 99
Query: 56 --WNGYLYAVNAFNGALIWEQNLSKLTGLSGTGI--VVNVTVAV-------------VVA 98
+ ++A++A G L W G VVN +A VA
Sbjct: 100 GPYPNRVFALDATTGELKWSYAPKPEPAAKGVACCDVVNRGLAFDNGKVFLNTLDDNTVA 159
Query: 99 VSRSNGELVWSTQIDPRPRSQ-ITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKL 157
+ G+ +W T++ + + +TM+ V G VG S E + RG + L
Sbjct: 160 IDAKTGKEIWHTKLGEINKGETVTMAPIVAKGKVIVGNSGGELGV--------RGWVTAL 211
Query: 158 DVRNGRIIWQTYML-PDNG---------------GKRGGYS----------GAAVWG--- 188
D G I W+ Y PD GK G + G +WG
Sbjct: 212 DENTGAIAWRAYATGPDKDVLIGDDFKPFYDSLKGKDLGVTSWPADRWRVGGGTMWGWVS 271
Query: 189 SSPAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYF 248
PA+++I N P + +Q ++++++I DID+G WA + +D+F
Sbjct: 272 FDPALNMIFFGTAN---PSPWNANQRKGDNLWSSTIFGRDIDTGHAKWAYQVNPHDLF-- 326
Query: 249 TCLVPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
D D +L+ + G+ R ++ ++G+ + DR +G++I
Sbjct: 327 ----------------DHDEINENVLVDLDIGGKTRKALIHPGRNGYMYVIDRTTGEVI 369
>gi|292493826|ref|YP_003529265.1| PQQ-dependent dehydrogenase, methanol/ethanol family [Nitrosococcus
halophilus Nc4]
gi|291582421|gb|ADE16878.1| PQQ-dependent dehydrogenase, methanol/ethanol family [Nitrosococcus
halophilus Nc4]
Length = 600
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 83/360 (23%), Positives = 147/360 (40%), Gaps = 86/360 (23%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAG--KDISATPAVANGVVY----FP 54
W+ G +N+RY+ + IN ++LR+ W+F G + P V +G +Y FP
Sbjct: 36 WIMPAGTYDNQRYSKLD-QINTDNAQDLRVAWTFSTGVLRGHEGNPLVIDGTMYVHTPFP 94
Query: 55 SWNGYLYAVNA-FNGALIWE----QNLSKLT----------GLS-GTG-IVVNVTVAVVV 97
+ ++A++ +GA+ W+ QN + GL+ G G I + +V
Sbjct: 95 N---KVFALDLDEDGAIKWKYEPVQNYEETVPVMCCDTINRGLAYGDGKIFLAQADTTLV 151
Query: 98 AVSRSNGELVWSTQID-PRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAK 156
A+ G++VWS + D P+ + T + V+ VG+S E + RG L
Sbjct: 152 ALDAKTGKVVWSVKRDDPKQGATSTGAPHVFKDKVLVGISGGEFGV--------RGYLEA 203
Query: 157 LDVRNGRIIWQTY-------MLPDNG-------------------GKRGGYSGAAVWG-- 188
DV +G IW+ Y ML D G++ G WG
Sbjct: 204 YDVNSGERIWKAYSTGPDEEMLIDPEKTTHLLKPVGKNSSLESWEGEQWKIGGGTTWGWF 263
Query: 189 -SSPAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFY 247
P ++++ N T P Q + ++ +I A D+D+G WA + +D +
Sbjct: 264 AYDPELNLVYYGTANPGTWNPV---QRPGDNRWSMTIFARDLDTGVAKWAYQMTPHDEW- 319
Query: 248 FTCLVPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
D D +L+ +G R ++V + ++GF + DR +G+++
Sbjct: 320 -----------------DYDGVNEMVLVDQKIDGEERKLLVHLDRNGFGYTLDRVTGELL 362
>gi|410612529|ref|ZP_11323606.1| alcohol dehydrogenase [cytochrome c] [Glaciecola psychrophila 170]
gi|410167870|dbj|GAC37495.1| alcohol dehydrogenase [cytochrome c] [Glaciecola psychrophila 170]
Length = 716
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 85/351 (24%), Positives = 137/351 (39%), Gaps = 76/351 (21%)
Query: 1 WLNHGGDLNNRRYA-YGEVLINPVTVRNLRLRWSFYAG--KDISATPAVANGVVYFPSWN 57
WL+HG + +R++ E IN TV L L WSF G + I TP V +G++Y S
Sbjct: 55 WLSHGRTYSEQRHSPLNE--INTETVAELGLFWSFDLGTSRGIEVTPIVHDGIMYVTSTW 112
Query: 58 GYLYAVNAFNGALIWEQN--LSKLTGLSGTGIVVNVTVAV-------------VVAVSRS 102
++A++A G +W + + K G VN VA+ +++++
Sbjct: 113 NIVHALDARTGEPLWRFDPIVDKEQASKGCCDAVNRGVAIWGDAVFTATIDGRLISLNAK 172
Query: 103 NGELVWS-TQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRN 161
G W + ID IT + V G +G E + RG ++ D
Sbjct: 173 TGLKNWDISTIDKSYPYTITGAPRVVKGKVIIGNGGAELGV--------RGYISAYDAIT 224
Query: 162 GRIIWQTYMLPDNGGK--------------RGGY----SGAAVWGS---SPAIDVIRRQK 200
G +W+ + +P N G Y G W S P +D++
Sbjct: 225 GERVWRFFTVPGNPADGFENETMEMAAKTWTGKYWAAGGGGTAWDSMAYDPELDLLYVGV 284
Query: 201 QN----NQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNP 256
N NQ + PD +++ +SIVA+ D+G W Y T
Sbjct: 285 GNGTPWNQAIR--SPDG--GDNLFLSSIVAVRPDTGEYVW---------HYQTT------ 325
Query: 257 DCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
PG D + +L ++ G+ R V++ K+GF + DR +G I
Sbjct: 326 ---PGETWDYTATQHMILAELNIAGKNRKVIMQAPKNGFFYVIDRTTGAFI 373
>gi|402773602|ref|YP_006593139.1| pqq dehydrogenase protein [Methylocystis sp. SC2]
gi|401775622|emb|CCJ08488.1| Putative pqq dehydrogenase protein [Methylocystis sp. SC2]
Length = 390
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 80/353 (22%), Positives = 138/353 (39%), Gaps = 82/353 (23%)
Query: 7 DLNNRRYAYGEVLINPVTVRNLRLRWSFYAGKD--ISATPAVANGVVYFPS-WNG----Y 59
D N RY+ + IN V L+L WSF G D A P V +GV+Y + ++G
Sbjct: 61 DYANTRYSALD-QINAENVSQLKLAWSFSVGVDRGQEAAPLVVDGVLYVAAPYDGPRPNQ 119
Query: 60 LYAVNAFNGALIWEQNLSKLTGLSGTG---------------IVVNVTVAVVVAVSRSNG 104
++A++A +G L W G I +N +VA+ G
Sbjct: 120 VFALDAASGELKWSYAPKPDVAAKGVACCDVVTRGLAYDNGKIFLNTLDNHMVALDARTG 179
Query: 105 ELVWSTQI-DPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGR 163
+W T++ D ITM+ G G S E + RG L +D G+
Sbjct: 180 VELWVTKLGDINLGETITMAPLAVKGKVLAGNSGGELGV--------RGWLTAVDQNTGK 231
Query: 164 IIWQTYML-PDN----------------GGKRG---------GYSGAAVWG---SSPAID 194
I+W+ + PD+ G RG G VWG P+++
Sbjct: 232 IVWRAHSTGPDSEVLIGADFRPFYDWMKGKDRGVDTWPRDRWKTGGGTVWGWLSYDPSVN 291
Query: 195 VIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPN 254
+I N P + +Q +++ ++I A D D+G WA + +D++
Sbjct: 292 LIYYGTAN---PGPWNSNQRPGDNLWTSTIFARDADTGMAKWAYQVSPHDLW-------- 340
Query: 255 NPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
D D +L+ + +G R ++ ++G+ + DR++G+++
Sbjct: 341 ----------DHDEVNENVLVDLEISGAKRKALIHPGRNGYMYVMDRETGEVL 383
>gi|384217192|ref|YP_005608358.1| hypothetical protein BJ6T_34960 [Bradyrhizobium japonicum USDA 6]
gi|354956091|dbj|BAL08770.1| hypothetical protein BJ6T_34960 [Bradyrhizobium japonicum USDA 6]
Length = 554
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 78/339 (23%), Positives = 138/339 (40%), Gaps = 68/339 (20%)
Query: 2 LNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAGKDIS--ATPAVANGVVYFPSWNGY 59
LN+G N +R++ +N TV+NL W++ D S + P V GV+Y S N
Sbjct: 37 LNYGMGYNLQRFSTLN-QVNKDTVKNLVPVWNYSFNDDRSEESQPLVYQGVIYVTSHNAT 95
Query: 60 LYAVNAFNGALIWEQN---------------LSKLTGLSGTGIVVNVTVAVVVAVSRSNG 104
+ AV+A G IW+ +++ L + A V+A+ +G
Sbjct: 96 M-AVDAKTGKQIWKSKVEYPAETPRIVCCGIINRGAALYDGKVFRTTLDANVIALDAKDG 154
Query: 105 ELVWSTQI-DPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGR 163
+ +W + D + +T++ V G G+S E RG + D G+
Sbjct: 155 KELWRQKAADIKEGYSMTVAPLVADGVVITGISGAEFGT--------RGFIDGWDPATGK 206
Query: 164 IIWQTYMLP---DNGG--------KRGGYSGAAVWGSSPAIDVIRRQKQN----NQTTKP 208
+W+T+ +P + GG K GG S P ++ + N N +P
Sbjct: 207 HLWRTHSIPSPDEPGGDTWKGDTWKLGGGSTWITGSYDPELNTVYWGIGNPGPFNSAVRP 266
Query: 209 THPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADF 268
++Y S++A+D +G+I W + F+ PNNP D D
Sbjct: 267 -------GDNLYTCSVLAMDPKTGKIKWH--------YQFS---PNNP-------FDYDS 301
Query: 269 GEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
+L ++ G+ V++ ++GF + DR +G ++
Sbjct: 302 VAEMVLADMNVEGKPTKVLMDANRNGFFYVLDRTNGKLL 340
>gi|448349716|ref|ZP_21538547.1| PQQ-dependent enzyme-like protein [Natrialba taiwanensis DSM 12281]
gi|445639349|gb|ELY92462.1| PQQ-dependent enzyme-like protein [Natrialba taiwanensis DSM 12281]
Length = 569
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 67/327 (20%), Positives = 122/327 (37%), Gaps = 50/327 (15%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFY--AGKDISATPAVANG---VVYFPS 55
WL +GG+ R +V I P V +L L + G + TP V G ++Y +
Sbjct: 63 WLMYGGNYEQHRATTADV-ITPDNVSDLELEYELSVGTGSSMEGTPIVVPGDPPIMYQTN 121
Query: 56 WNGYLYAVNAFNGALIWEQNLSKLTGLS-------------GTGIVVNVTVAVVVAVSRS 102
++ A++ G ++W + G+ G + + + +VA++R
Sbjct: 122 GPNHMKAIDPREGEVLWSYTYAPPIGVELCCDDNNRGAAVLGDTVYMTTLDSGIVALNRY 181
Query: 103 NGELVWSTQI-DPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRN 161
GE W T D T + ++ G Y G + E + G +A LD +
Sbjct: 182 TGEEEWYTSTADHEEGYSATWAPVIHGGTIYTGSAGGEYGV--------LGFMAALDAES 233
Query: 162 GRIIWQTYMLPDNG--GKRGGYSGAAVWGSSPAIDVIRRQKQNNQTTKPTHPDQCIS--S 217
G I WQT LP++ G + W +P ID R D +
Sbjct: 234 GEIQWQTETLPEDEWVGASREHGCGTTW-MTPTIDEDREVLYTAVANPGPDFDGTVRPGP 292
Query: 218 DIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTI 277
+ ++LD++SG W +D++ + + P ++ +
Sbjct: 293 NFPTCGTISLDLESGEWEWGFQSSPHDVWDYDAVAPRV-----------------LIRDV 335
Query: 278 STNGRFRDVVVAVQKSGFAWAFDRDSG 304
+ ++VV K+G+ + D +SG
Sbjct: 336 DVDDGPSEMVVGSDKTGWVYMMDAESG 362
>gi|374576955|ref|ZP_09650051.1| PQQ-dependent dehydrogenase, methanol/ethanol family
[Bradyrhizobium sp. WSM471]
gi|374425276|gb|EHR04809.1| PQQ-dependent dehydrogenase, methanol/ethanol family
[Bradyrhizobium sp. WSM471]
Length = 554
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 78/339 (23%), Positives = 138/339 (40%), Gaps = 68/339 (20%)
Query: 2 LNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAGKDIS--ATPAVANGVVYFPSWNGY 59
LN+G N +R++ IN +V+NL W++ D S + P V GV+Y S N
Sbjct: 37 LNYGMGYNLQRFSTLN-QINKDSVKNLVPVWNYSFNDDRSEESQPLVYQGVIYVTSHNAT 95
Query: 60 LYAVNAFNGALIWEQN---------------LSKLTGLSGTGIVVNVTVAVVVAVSRSNG 104
+ AV+A G IW+ +++ L + A V+A+ +G
Sbjct: 96 M-AVDAKTGKQIWKSKVEYPAETPRIVCCGIINRGAALYEGKVFRTTLDANVIALDAKDG 154
Query: 105 ELVWSTQI-DPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGR 163
+ +W + D + +T++ V G G+S E RG + D G+
Sbjct: 155 KELWRQKAADIKEGYSMTVAPLVADGVLITGISGAEFGT--------RGFIDGWDPATGK 206
Query: 164 IIWQTYMLP---DNGG--------KRGGYSGAAVWGSSPAIDVIRRQKQN----NQTTKP 208
+W+T+ +P + GG K GG S P ++ + N N +P
Sbjct: 207 HLWRTHSIPSPDEPGGDTWKGDTWKLGGGSTWITGSYDPELNTVYWGIGNPGPFNSAVRP 266
Query: 209 THPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADF 268
++Y S++A+D +G+I W + F+ PNNP D D
Sbjct: 267 -------GDNLYTCSVLAMDPKTGKIKWH--------YQFS---PNNP-------FDYDS 301
Query: 269 GEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
+L ++ G+ V++ ++GF + DR +G ++
Sbjct: 302 VAEMVLADMNVEGKPTKVLMDANRNGFFYVLDRTNGKLL 340
>gi|91775804|ref|YP_545560.1| Pyrrolo-quinoline quinone [Methylobacillus flagellatus KT]
gi|91709791|gb|ABE49719.1| Pyrrolo-quinoline quinone [Methylobacillus flagellatus KT]
Length = 616
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 80/344 (23%), Positives = 133/344 (38%), Gaps = 79/344 (22%)
Query: 12 RYAYGEVLINPVTVRNLRLRWSFYAG--KDISATPAVANGVVYFPS-WNGYLYAVNAFNG 68
RY+ G IN V++L+L W+F G A P + +Y + + +YA+ A +G
Sbjct: 74 RYS-GLSQINRDNVKDLKLAWTFSTGLTPGHEAAPVFVDDTLYVVTPYPNTVYAL-ALDG 131
Query: 69 ALIWE---QNLSKLTGLSGTGIVVNVTVAV------------VVAVSRSNGELVWSTQID 113
+ WE + G++ +V V V +A+ G+ +W T++
Sbjct: 132 SKKWEYKPDTHQESQGMACCDVVNRGLVHVNGKLFFNTLDNHAIALEADTGKELWKTKVG 191
Query: 114 PRPRSQ-ITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYML- 171
R + +TM+ V G VG S E + RG L LD G ++W Y
Sbjct: 192 DLQRGETMTMAPLVVKGKMLVGNSGGEMGV--------RGWLKALDTETGELLWTAYSTG 243
Query: 172 PD---------------NGGKRGGYS----------GAAVWG---SSPAIDVIRRQKQNN 203
PD + GK G S G VWG P +D++ N
Sbjct: 244 PDKDVLIGEEFRPFYAQDQGKDLGASSWPPEMWKIGGGTVWGWLSYDPELDLVYYGTGN- 302
Query: 204 QTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPN 263
P +PD + + ++ A D G WA + +D++
Sbjct: 303 --PGPWNPDFRPGDNKWTLTVFARRPDDGSAIWAYQIEPHDLY----------------- 343
Query: 264 LDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
D D +L+ + NG R V+V +++G + DR SG+++
Sbjct: 344 -DYDGVNESLLIDMPFNGEQRKVLVRPERNGHVYVMDRTSGEVL 386
>gi|409394887|ref|ZP_11246034.1| alcohol dehydrogenase [Pseudomonas sp. Chol1]
gi|409120536|gb|EKM96880.1| alcohol dehydrogenase [Pseudomonas sp. Chol1]
Length = 710
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 76/354 (21%), Positives = 135/354 (38%), Gaps = 78/354 (22%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNL-RLRWSFYA----GKDISATPAVANGVVYFPS 55
WL +G + +R++ + + V N+ +L+ +YA D+ TP V +GV+Y+
Sbjct: 45 WLAYGRTHSEQRFS----PLKDINVENVSQLKPEWYAPLPDRSDMVGTPLVVDGVMYYVG 100
Query: 56 WNGYLYAVNAFNGALIWE-----------QNLSKL-----TGLS--GTGIVVNVTVAVVV 97
A +A G ++WE N+ K+ GLS G + + ++
Sbjct: 101 EMNRTRAFDARTGKMLWEYDPKVSKEILDNNMKKVFWKHSRGLSTYGDKLFIATWDGRLI 160
Query: 98 AVSRSNGELVWSTQ-IDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAK 156
A++R +G+ VW T+ D IT + G ++G E RG +
Sbjct: 161 AINRKDGKEVWQTRTFDHDQPLNITGHPKAFDGKVFIGNGGTE-------LGPMRGYVTA 213
Query: 157 LDVRNGRIIWQTYMLPDNGG----KRGGYSGAAVW--------GSSPAIDVIRRQKQNNQ 204
D G+ IW+ Y++P N + A W G A ++ NQ
Sbjct: 214 YDTETGKQIWRFYIVPGNPANGFEDKAQEMAAKTWTGRWWENGGGGNAWHGWTYDEKYNQ 273
Query: 205 -----------TTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVP 253
K P+ +++ S+VA+D D+G W
Sbjct: 274 LIFGTGNGGPWNIKVRSPEG--GDNLFLCSVVAVDADTGEYKW----------------- 314
Query: 254 NNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
+ PG D + +L + +G+ D V+ K+GF + DR +G ++
Sbjct: 315 -HVQTAPGDTWDYNSNMDIVLADLKIDGKDVDAVLHAPKNGFFYTIDRSNGKVL 367
>gi|374619800|ref|ZP_09692334.1| PQQ-dependent dehydrogenase, methanol/ethanol family [gamma
proteobacterium HIMB55]
gi|374303027|gb|EHQ57211.1| PQQ-dependent dehydrogenase, methanol/ethanol family [gamma
proteobacterium HIMB55]
Length = 736
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 81/357 (22%), Positives = 136/357 (38%), Gaps = 75/357 (21%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAGKD--ISATPAVANGVVYFPSWNG 58
WL +GG + R++ +N T+++L + W + K ATP V +GV+Y
Sbjct: 57 WLTYGGSYDETRHS-SLASVNGDTIQDLGVSWVYTMDKPRGAEATPIVVDGVMYVSGSWS 115
Query: 59 YLYAVNAFNGALIW--EQNLSKLTGLSGTGIVVNVTVAV-------------VVAVSRSN 103
+YA++A G +W + +S G VVN VAV + A+ +
Sbjct: 116 VVYAIDAKTGEELWTYDPEVSGKDAAKGCCDVVNRGVAVHNGKVFVGVFDGRLEALDAAT 175
Query: 104 GELVWS-TQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNG 162
GE++WS +D IT + V+ +G S E + RG + +V G
Sbjct: 176 GEVLWSNVTVDQSKPYTITGAPRVFKDKVIIGNSGAELGV--------RGYVTAYNVETG 227
Query: 163 RIIWQTYMLPDNGGKRGGYSGAAV--------WGSSPA----------IDVIRRQKQNNQ 204
W+ Y +P+ + G + A+ WG + A D I N+Q
Sbjct: 228 DEEWRFYTVPNPNKEPDGAASDAIFAELANDSWGDTGAWTTDGGGGTVWDSIVYDTVNDQ 287
Query: 205 T-----------TKPTHPDQCIS---SDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTC 250
P+ S +++ +SI+A+D D+G W D + +T
Sbjct: 288 VLIGVGNGSPWNASVRDPEGDFSGAYDNLFLSSILAVDADTGAYRWHYQTTPRDQWDYTA 347
Query: 251 LVPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
E PM +G R VV+ K+GF + D G+++
Sbjct: 348 ------------TQQMILAELPM----GVDGAMRRVVMQAPKNGFFYVLDAADGELL 388
>gi|421603661|ref|ZP_16046012.1| quinoprotein ethanol dehydrogenase [Bradyrhizobium sp. CCGE-LA001]
gi|404264233|gb|EJZ29562.1| quinoprotein ethanol dehydrogenase [Bradyrhizobium sp. CCGE-LA001]
Length = 554
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 78/339 (23%), Positives = 138/339 (40%), Gaps = 68/339 (20%)
Query: 2 LNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAGKDIS--ATPAVANGVVYFPSWNGY 59
LN+G N +R++ + IN TV+NL W++ D S + P V GV+Y + N
Sbjct: 37 LNYGMGYNLQRFSTLK-QINKDTVKNLVPVWNYSFNDDRSEESQPIVYQGVIYVTTHNAT 95
Query: 60 LYAVNAFNGALIWEQNLSK--------LTGLSGTGIVVN-------VTVAVVVAVSRSNG 104
+ AV+ G IW+ + G+ G+ ++ A V+A+ G
Sbjct: 96 M-AVDVKTGKQIWKSKIEYPAETPRIVCCGIINRGVAIHEGKLFRTTLDANVIAIDAKTG 154
Query: 105 ELVWSTQI-DPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGR 163
+ +W + D + +T++ V G G+S E RG + D G+
Sbjct: 155 KELWRQKAADIKEGYSMTVAPLVADGVVITGISGAEFGT--------RGFIDGWDPATGK 206
Query: 164 IIWQTYMLP---DNGG--------KRGGYSGAAVWGSSPAIDVIRRQKQN----NQTTKP 208
+W+T+ +P + GG K GG S P ++ I N N +P
Sbjct: 207 HLWRTHSIPSPDEPGGDTWKGDTWKLGGGSTWITGSYDPELNTIYWGIGNPGPFNSAVRP 266
Query: 209 THPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADF 268
++Y S++A+D +G+I W + F+ PNNP D D
Sbjct: 267 -------GDNLYTCSVLAMDPKTGKIKWH--------YQFS---PNNP-------FDYDA 301
Query: 269 GEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
+L ++ G+ ++ ++GF + DR +G ++
Sbjct: 302 VAEMVLADVNIEGKPTKTLMNANRNGFFYVLDRTNGKLL 340
>gi|254501179|ref|ZP_05113330.1| PQQ-dependent dehydrogenase, methanol/ethanol family [Labrenzia
alexandrii DFL-11]
gi|222437250|gb|EEE43929.1| PQQ-dependent dehydrogenase, methanol/ethanol family [Labrenzia
alexandrii DFL-11]
Length = 703
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 82/346 (23%), Positives = 136/346 (39%), Gaps = 63/346 (18%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSF--YAGKDISATPAVANGVVYFPSWNG 58
WLN+G + RY+ + I V L L WS+ + + + ATP VA+GV+Y +
Sbjct: 50 WLNYGLNYAETRYSQLDT-ITADNVGELGLAWSYNLESRRGVQATPIVADGVMYVTASWS 108
Query: 59 YLYAVNAFNGALIW--EQNLSKLTGLSGTGIVVNVTVAV-------------VVAVSRSN 103
++A++A G +W + + G VVN VA+ + A+ +
Sbjct: 109 IVHALDAITGEKLWVYDPEVPGEYAAKGCCDVVNRGVAIYEGKVFVGSYDGYLHALDAAT 168
Query: 104 GELVWSTQ-IDPRPRS-QITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRN 161
GEL+W I+ R S +T + V G +G E + RG ++ D
Sbjct: 169 GELLWKIDTIENRDMSYTVTGAPRVINGKVIIGNGGAEFGV--------RGYISAYDTET 220
Query: 162 GRIIWQTYMLPDNGGKRGGYSGAAVWGSSPAIDVIRRQKQNNQTTKPTHP-------DQC 214
G +W+ Y +P + K Y A+ K +T P+
Sbjct: 221 GDTVWRWYTVPGDPAKP--YENDAM-------------KMAAETWDPSAKYWEAGGGGTV 265
Query: 215 ISSDIYANSIVALDIDSGRIA-WAKPL---GGYDIFYFTCLVPNNPDC---------PPG 261
+ Y + L I +G + W + L G D + +V NPD PG
Sbjct: 266 WDAMAYDQELNLLYIGTGNGSPWNQHLRSPAGGDNLFLASIVALNPDTGDYVWHYQNTPG 325
Query: 262 PNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
D + +L + +G R V++ K+GF + DR +G+ I
Sbjct: 326 DTWDYTSTQHIILADLEIDGDTRQVLMQAPKNGFFYVIDRTNGEFI 371
>gi|390566908|ref|ZP_10247261.1| methanol/ethanol family PQQ-dependent dehydrogenase [Burkholderia
terrae BS001]
gi|420252734|ref|ZP_14755833.1| PQQ-dependent dehydrogenase, methanol/ethanol family [Burkholderia
sp. BT03]
gi|389941292|gb|EIN03068.1| methanol/ethanol family PQQ-dependent dehydrogenase [Burkholderia
terrae BS001]
gi|398053895|gb|EJL46045.1| PQQ-dependent dehydrogenase, methanol/ethanol family [Burkholderia
sp. BT03]
Length = 605
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 81/359 (22%), Positives = 140/359 (38%), Gaps = 82/359 (22%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAG--KDISATPAVANGVVYFPS-WN 57
W GD +N RY+ + IN V L++ W+ G + +P V +Y S +
Sbjct: 39 WAAQAGDYSNHRYSPLK-QINESNVGKLQVAWTMSTGVLRGHEGSPLVIGDTMYIHSPFP 97
Query: 58 GYLYAVNAFNGALIWE----QNLSKLT---------GLS-GTG-IVVNVTVAVVVAVSRS 102
+ A+N + IW+ Q+ S ++ GL+ G G I + +VA++
Sbjct: 98 NKVIAINLKDQTFIWQYEPKQDASVISVMCCDTVNRGLAYGDGKIFLQQADTKLVALNAK 157
Query: 103 NGELVWSTQI-DPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRN 161
GE+VW+ Q DP+ T + V+ G+S E + RG L D++
Sbjct: 158 TGEVVWTAQNGDPKAGETNTNAPHVFGDKVLTGISGGEFGV--------RGRLIAYDMKT 209
Query: 162 GRIIWQTYML-PDN-----------------------------GGKRGGYSGAAVWG--- 188
G+ W+ Y PDN G + G WG
Sbjct: 210 GKEAWKAYSTGPDNEMLLDPQQTMTWVDGKMQPVGADSSIKSWKGDQWKLGGGTTWGWYA 269
Query: 189 SSPAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYF 248
P ++++ N T PT Q + ++ SI A D+++G+ W ++
Sbjct: 270 WDPKLNLVYYGTGNPGTWNPT---QRPGDNKWSMSIFARDLNTGKAKW--------VYQM 318
Query: 249 TCLVPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
T P D D +L IS NG+ +V ++GF + +R++G+++
Sbjct: 319 T----------PHDEWDYDGVNEMILSDISINGKKTPAIVHFDRNGFGYTLNRETGELL 367
>gi|319783981|ref|YP_004143457.1| methanol/ethanol family PQQ-dependent dehydrogenase [Mesorhizobium
ciceri biovar biserrulae WSM1271]
gi|317169869|gb|ADV13407.1| PQQ-dependent dehydrogenase, methanol/ethanol family [Mesorhizobium
ciceri biovar biserrulae WSM1271]
Length = 633
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 79/372 (21%), Positives = 146/372 (39%), Gaps = 93/372 (25%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVT---VRNLRLRWSFYAG--KDISATPAVANGVVY--- 52
W GD N RY+ +N +T V+NL+++W+F G + P + V+Y
Sbjct: 41 WAMQTGDYANTRYSK----LNQITADNVKNLQVKWTFSTGVLRGHEGGPLIIGDVMYVHT 96
Query: 53 -FPSWNGYLYAVNAFN-GALIWE---------------QNLSKLTGLSGTGIVVNVTVAV 95
FP+ ++A++ N G ++W+ +++ I++N
Sbjct: 97 PFPN---NVFALDLKNDGKILWKYEPKQDPNVIPIMCCDTVNRGVAYGDGKIILNQADTT 153
Query: 96 VVAVSRSNGELVWST----QIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFR 151
VVA+ G++VWS Q D T + V +G+S E + R
Sbjct: 154 VVALDAKTGKVVWSVKNGDQTDGGKGESGTAAPVVVKDKVLIGVSGAEFGV--------R 205
Query: 152 GSLAKLDVRNGRIIWQTY---------------------MLPDNG-----GKRGGYSGAA 185
G LA ++++G++ W+ Y + D+G G++ G
Sbjct: 206 GWLAAYNLKDGKLAWKAYSEGPDADTLIDPEKTTQLGKPVGKDSGTNTWEGEQWKTGGGT 265
Query: 186 VWG---SSPAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGG 242
WG P ++++ N T P Q + ++ +I+A D D+G W +
Sbjct: 266 TWGWYSYDPKLNLVYYGTGNPSTWNPV---QRPGDNRWSMTIMARDADTGVAKWLYQMTP 322
Query: 243 YDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRD 302
+D + + + E ++ + NG DV+V ++GFA+ DR
Sbjct: 323 HDEWDYDGI-----------------NEMILVDGMEVNGAKHDVLVHFDRNGFAYTMDRA 365
Query: 303 SGDIIWFKLAGP 314
+GD++ K P
Sbjct: 366 TGDLLVAKKYDP 377
>gi|182411887|ref|YP_001816953.1| Pyrrolo-quinoline quinone [Opitutus terrae PB90-1]
gi|177839101|gb|ACB73353.1| Pyrrolo-quinoline quinone [Opitutus terrae PB90-1]
Length = 704
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 77/352 (21%), Positives = 127/352 (36%), Gaps = 74/352 (21%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAGK------DISATPAVANGVVYFP 54
W ++ GD Y+ + I VR+L + W++ AG I P V +GVVY
Sbjct: 31 WPSYLGDRAASHYSTLD-QITTENVRSLTIAWTWRAGDARADSTQIQCNPLVVDGVVYVT 89
Query: 55 SWNGYLYAVNAFNGALIWEQNLSKLTGL---------------------------SGTGI 87
+ L A+ A GA W + + +G+ +GTG
Sbjct: 90 TPGLKLVALEAATGAERWRFDPPETSGVNRGMSYWADGDDRRILYASGRWLHAVDAGTGR 149
Query: 88 VV-NVTVAVVVAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQ 146
V+ + + +SR G V Q+D G +Y + E PA
Sbjct: 150 VIESFGQRGRIDLSRGLGRDVTGMQVD------ANTPGVIYRNLIILSTRVGEGPGPAAP 203
Query: 147 CCTFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYSGAAVWGSSPAIDVIRRQKQNNQTT 206
G + DVR G +W + LP G A W ++V + +
Sbjct: 204 -----GHIRAFDVRTGMPVWTFHTLPQPGEPGHETWPADAWRKVGGVNVWAGMTVDEERG 258
Query: 207 KPTHPDQCISSD----------IYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNP 256
P + D +Y+N ++ALD +GR W + +D++
Sbjct: 259 LVFCPVGSAAFDFWGGDRRGDNLYSNCLLALDAATGRRVWHYQMVRHDLW---------- 308
Query: 257 DCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDIIW 308
D D P L+T+ +GR V + K G+ W F R++G+ ++
Sbjct: 309 --------DRDPPAPPTLVTVQRDGRSVPAVAQITKQGYVWVFHRETGEPLF 352
>gi|254369843|ref|ZP_04985853.1| conserved hypothetical protein [Francisella tularensis subsp.
holarctica FSC022]
gi|157122802|gb|EDO66931.1| conserved hypothetical protein [Francisella tularensis subsp.
holarctica FSC022]
Length = 456
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 85/231 (36%), Gaps = 60/231 (25%)
Query: 44 PAVANGVVYFPSWNGYLYAVNAFNGALIWEQ----NLSKLTGLSGTGIVVNVTVAVVVAV 99
PA AN V+ P+ NG YA+ NG +IW+ NLS ++ + A+
Sbjct: 63 PAYANDTVFVPNQNGMAYALAITNGKIIWKNDTGTNLSVQPNTIANAVIFGSIKGTLTAI 122
Query: 100 SRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDV 159
+G+ +W T SQ T +Y + Y+ T GS++ D
Sbjct: 123 DDKDGQTLWRTDAPSSIFSQPT----IYDNSIYL--------------QTHDGSVSAFDA 164
Query: 160 RNGRIIWQT------YMLPDNGG----------------------KRGGYS----GAAVW 187
RNG W LP N KRG + A
Sbjct: 165 RNGSKEWSVANNIPEITLPSNSSPIILNNTVMIGNAFGAVLGFTIKRGDRTINIPIAISH 224
Query: 188 GSSPAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAK 238
GSSPA K + T P D + Y +IVALD DSG++ WAK
Sbjct: 225 GSSPA------DKMVDITANPMLYDHYLIFAAYQGAIVALDKDSGKMLWAK 269
>gi|456355481|dbj|BAM89926.1| alcohol dehydrogenase [Agromonas oligotrophica S58]
Length = 585
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/305 (21%), Positives = 119/305 (39%), Gaps = 49/305 (16%)
Query: 20 INPVTVRNLRLRWSFYAG--KDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWE---- 73
IN V+N+ W+F G + A P V NGV++ + G + A+NA G W
Sbjct: 74 INTTNVKNMVPAWTFATGVIEGHEAPPLVNNGVMFITTPMGQVIALNAKTGDQYWRYKRE 133
Query: 74 --QNLSKL------TGLSGTGIVVNVTVAVVVAVSRSNGELVWSTQIDPRPRSQ-ITMSG 124
++L +L GL + + T +VA+ G+++W ++ + Q +T+
Sbjct: 134 LPEDLFQLHPTNRGVGLWQDKLYLATTDDHLVALDAKTGKVLWDKKVQDYKKGQYLTLMP 193
Query: 125 SVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNG--------G 176
+ G VG S E + RG + D +G+ +W+T+ +P G G
Sbjct: 194 LIVDGKVMVGGSGGEFGV--------RGYVVAYDAEDGKELWRTFTIPGEGEPGHDTWSG 245
Query: 177 KRGGYSGAAVWGSSPAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAW 236
G + W + + P ++Y +S++ALD +G+I
Sbjct: 246 DDWKSGGGSAWMTGTYDKDTKTVYWGVGNAAPWPGGMHPGDNLYTSSVIALDPATGKIK- 304
Query: 237 AKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFA 296
T + D + D D +APML+ + +GR ++ +
Sbjct: 305 ------------THFQYHQND-----SWDWDEVDAPMLVDLQRDGRSFKSLIHPGRDAIF 347
Query: 297 WAFDR 301
W +R
Sbjct: 348 WVLER 352
>gi|89256993|ref|YP_514355.1| lipoprotein [Francisella tularensis subsp. holarctica LVS]
gi|115315353|ref|YP_764076.1| hypothetical protein FTH_1663 [Francisella tularensis subsp.
holarctica OSU18]
gi|156503193|ref|YP_001429258.1| lipoprotein [Francisella tularensis subsp. holarctica FTNF002-00]
gi|254368248|ref|ZP_04984268.1| hypothetical protein FTHG_01603 [Francisella tularensis subsp.
holarctica 257]
gi|290954486|ref|ZP_06559107.1| lipoprotein [Francisella tularensis subsp. holarctica URFT1]
gi|422939256|ref|YP_007012403.1| hypothetical protein FTS_1681 [Francisella tularensis subsp.
holarctica FSC200]
gi|423051369|ref|YP_007009803.1| lipoprotein [Francisella tularensis subsp. holarctica F92]
gi|89144824|emb|CAJ80163.1| conserved hypothetical lipoprotein [Francisella tularensis subsp.
holarctica LVS]
gi|115130252|gb|ABI83439.1| conserved hypothetical protein [Francisella tularensis subsp.
holarctica OSU18]
gi|134254058|gb|EBA53152.1| hypothetical protein FTHG_01603 [Francisella tularensis subsp.
holarctica 257]
gi|156253796|gb|ABU62302.1| hypothetical lipoprotein [Francisella tularensis subsp. holarctica
FTNF002-00]
gi|407294407|gb|AFT93313.1| hypothetical protein FTS_1681 [Francisella tularensis subsp.
holarctica FSC200]
gi|421952091|gb|AFX71340.1| lipoprotein [Francisella tularensis subsp. holarctica F92]
Length = 456
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 85/231 (36%), Gaps = 60/231 (25%)
Query: 44 PAVANGVVYFPSWNGYLYAVNAFNGALIWEQ----NLSKLTGLSGTGIVVNVTVAVVVAV 99
PA AN V+ P+ NG YA+ NG +IW+ NLS ++ + A+
Sbjct: 63 PAYANDTVFVPNQNGMAYALAITNGKIIWKNDTGTNLSVQPNTIANAVIFGSIKGTLTAI 122
Query: 100 SRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDV 159
+G+ +W T SQ T +Y + Y+ T GS++ D
Sbjct: 123 DDKDGQTLWRTDAPSSIFSQPT----IYDNSIYL--------------QTHDGSVSAFDA 164
Query: 160 RNGRIIWQT------YMLPDNGG----------------------KRGGYS----GAAVW 187
RNG W LP N KRG + A
Sbjct: 165 RNGSKEWSVANNIPEITLPSNSSPIILNNTVMIGNAFGAVLGFTIKRGDRTINIPIAISH 224
Query: 188 GSSPAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAK 238
GSSPA K + T P D + Y +IVALD DSG++ WAK
Sbjct: 225 GSSPA------DKMVDITANPMLYDHYLIFAAYQGAIVALDKDSGKMLWAK 269
>gi|347761882|ref|YP_004869443.1| alcohol dehydrogenase [Gluconacetobacter xylinus NBRC 3288]
gi|347580852|dbj|BAK85073.1| alcohol dehydrogenase large subunit [Gluconacetobacter xylinus NBRC
3288]
Length = 739
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 76/359 (21%), Positives = 131/359 (36%), Gaps = 80/359 (22%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRW--SFYAGKDISATPAVANGVVYFPSWNG 58
W+ +G + +RY+ + IN V NL+L W + TP V +GV+Y +
Sbjct: 56 WMTYGRTYSEQRYSPLD-QINRSNVGNLKLAWYLDLDTNRGQEGTPLVVDGVMYATTNWS 114
Query: 59 YLYAVNAFNGALIWEQNLSKLTGLSGTGIVVNVTVAV---------------VVAVSRSN 103
+ AV+A G L+W + ++ G V ++A+
Sbjct: 115 MMKAVDAATGKLLWSYDPRVPGNIADKGCCDTVNRGAAYWNGKVYFGTFDGRLIALDAKT 174
Query: 104 GELVWSTQIDPRPRSQI------TMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKL 157
G+LVWS P P +Q+ T+ G+ + V + + A RG +
Sbjct: 175 GKLVWSVNTIP-PEAQLGKQRSYTVDGAPRIAKGRVIIGNGGSEFGA------RGFVTAF 227
Query: 158 DVRNGRIIWQTYMLPDNGG--------------------------KRGGYSGAAVWGS-- 189
D G++ W+ + +P+ ++GG G VW S
Sbjct: 228 DAETGKVDWRFFTVPNPKNEPDHAASDSVLMNKAYQTWSPTGAWTRQGG--GGTVWDSIV 285
Query: 190 -SPAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYF 248
P D++ N + + +++ SIVAL ++G W D + F
Sbjct: 286 YDPVTDLVYLGVGNGSPWNYKYRSEGKGDNLFLGSIVALKPETGEYVWHFQETPMDQWDF 345
Query: 249 TCLVPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
T + + M L + NG R V+V K+GF + D +G+ I
Sbjct: 346 TSV------------------QQIMTLDLPINGETRHVIVHAPKNGFFYIIDAKTGEFI 386
>gi|116625954|ref|YP_828110.1| pyrrolo-quinoline quinone [Candidatus Solibacter usitatus
Ellin6076]
gi|116229116|gb|ABJ87825.1| Pyrrolo-quinoline quinone [Candidatus Solibacter usitatus
Ellin6076]
Length = 591
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 80/338 (23%), Positives = 128/338 (37%), Gaps = 79/338 (23%)
Query: 20 INPVTVRNLRLRWSFYAG--KDISATPAVANGVVYFPS-WNGYLYAVNAFNGALIWEQNL 76
+N TV+NL+L W+F G + A P V N +Y + W LYA++ + +
Sbjct: 53 VNTGTVKNLKLAWTFSTGLTRGHEAAPLVINNTMYIVTPWPNILYALDLTKAGAPVKWSY 112
Query: 77 SKLTGLSGTGI----VVNVTVAV-------------VVAVSRSNGELVWSTQI-DPRPRS 118
S G+ VVN A VA+ + G+ +W+T + D
Sbjct: 113 KPKPSPSSQGVACCDVVNRGAAYYNGRIYYNTLDMHTVAIDAATGKEIWNTVLGDINKGE 172
Query: 119 QITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYML-PDN--- 174
+TM+ V G VG S E + RG LA LD ++G+I W+ Y PD
Sbjct: 173 SMTMAPLVVKGIVIVGNSGGEFGV--------RGWLAGLDAKDGKIAWRAYAAGPDKDVL 224
Query: 175 ---------GGKRGGYSGAAVW---------GSS-------PAIDVIRRQKQNNQTTKPT 209
R G W GSS P +D+I N P
Sbjct: 225 IGPSFRPFYAADRAPDLGVKTWSGDAWKIGGGSSWSWISFDPDLDLIYYGTAN---PGPW 281
Query: 210 HPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFG 269
+ DQ + + +I A ++G WA + +D + D D
Sbjct: 282 NADQRPGDNKWTCTIFARRPETGEAVWAYQMNPHD------------------DHDYDGV 323
Query: 270 EAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
+L ++ NG+ R V++ ++ + DR +G++I
Sbjct: 324 NENILADLTINGKLRKVLIHPDRNARMYVIDRATGEVI 361
>gi|358638805|dbj|BAL26102.1| putative quinoprotein ethanol dehydrogenase [Azoarcus sp. KH32C]
Length = 553
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 80/321 (24%), Positives = 126/321 (39%), Gaps = 72/321 (22%)
Query: 20 INPVTVRNLRLRWSFYAG---KDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNL 76
IN V L++ W G I ATP V +GV+Y+ S N ++AV+A G +W
Sbjct: 52 INRDNVGRLKVAWIHQPGNITHGIQATPIVIDGVLYYVSANNNVWAVDAATGRTLWHYE- 110
Query: 77 SKLTGLSGTGIVVNVTVAVV---------------VAVSRSNGELVWSTQIDPRPRSQI- 120
KL LS + + V VA+ + G+ +W+TQ+ + +SQ
Sbjct: 111 PKLDPLSKQAFYASASRGVTVGRGKVFLGTLDGRFVALDQKTGKELWATQLTDQ-KSQYG 169
Query: 121 -------TMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYML-- 171
++G V G G DQ + G + ++ G+ W +L
Sbjct: 170 ALFSAPPQLAGDVLFGGTTGG----------DQPIS--GKIYAVNADTGKPAWTFDILRD 217
Query: 172 -----PDNGGKRGGYSGAAVWGSSPAIDVIRRQKQNNQTTKPTHPDQCISSD-IYANSIV 225
P + KRGG S P D I N P + + D Y S++
Sbjct: 218 DPESWPGDSRKRGGGSAWMPGTFDPRTDTIYIGTSN---AAPDYFNADRKGDNKYTASLL 274
Query: 226 ALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRD 285
ALD +G++ WA+ +D + F EA L+ +G +D
Sbjct: 275 ALDPRTGKLKWARQEIPHDSWDFDSAY-----------------EA--LMVKGADG--KD 313
Query: 286 VVVAVQKSGFAWAFDRDSGDI 306
V+V + KSGF + D+D G +
Sbjct: 314 VIVHLNKSGFVFVMDKDDGKL 334
>gi|254516652|ref|ZP_05128711.1| methanol dehydrogenase protein, large subunit [gamma
proteobacterium NOR5-3]
gi|219675075|gb|EED31442.1| methanol dehydrogenase protein, large subunit [gamma
proteobacterium NOR5-3]
Length = 711
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 76/339 (22%), Positives = 138/339 (40%), Gaps = 51/339 (15%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFY--AGKDISATPAVANGVVYFP-SWN 57
W HG + + R++ + IN + NL L W F A + ATP V +G +Y SW+
Sbjct: 53 WAMHGLNPSETRFSPLDQ-INADNIENLGLEWYFDYPAARGKEATPIVVDGKIYTSGSWS 111
Query: 58 GYLYAVNAFNGALIW--EQNLSKLTGLSGTGIVVNVTVAV-------------VVAVSRS 102
++A +A G ++W + + + + VVN VA+ +++++
Sbjct: 112 N-IFAHDALTGEMLWFFDPKVPRDWAVHLCCDVVNRGVALHEGNVYFGTLDGRLISLNSE 170
Query: 103 NGELVWSTQIDPRPRS-QITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRN 161
+G W Q R + IT + + +G E RG ++ ++ +
Sbjct: 171 DGSKRWEVQTTDRNKPYSITGAPRIVKDKVIIGNGGAE--------LGVRGYVSAYNLDD 222
Query: 162 GRIIWQTYMLPDNGGKRGGYSGAAVWGSSPAIDVIRRQKQNNQTTKPTHPDQCISSDIYA 221
G + W+ Y +P G G+ AA+ ++ + T S Y
Sbjct: 223 GELAWRFYTVP--GNPADGFENAAMEKAAETWGGGEWWEIGGGGT-------VWDSMAYD 273
Query: 222 NSIVALDIDSGRIA-WAKPL---GGYDIFYFTCLVPNNPD---------CPPGPNLDADF 268
+ L + G A W + L G D Y + ++ NPD PG + D
Sbjct: 274 PELNLLYVGVGNGAPWNRQLRSPDGGDNLYLSSILALNPDDGSYVWHYQTTPGDSWDYTA 333
Query: 269 GEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
+ +L T++ G RDV++ K+GF + DR +G+++
Sbjct: 334 TQHMILATLNIAGAPRDVIMQAPKNGFFYVLDRKTGELL 372
>gi|119503923|ref|ZP_01626005.1| Alcohol dehydrogenase large subunit [marine gamma proteobacterium
HTCC2080]
gi|119460431|gb|EAW41524.1| Alcohol dehydrogenase large subunit [marine gamma proteobacterium
HTCC2080]
Length = 740
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 80/353 (22%), Positives = 132/353 (37%), Gaps = 71/353 (20%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAGKD--ISATPAVANGVVYFPSWNG 58
WL +GG + R++ +N T+ L + W + K + ATP V +GV+Y
Sbjct: 66 WLTYGGSYDETRHS-SLTKVNRDTLSELGIGWVYDMKKPRGVEATPIVVDGVMYVTGSWS 124
Query: 59 YLYAVNAFNGALIW--EQNLSKLTGLSGTGIVVNVTVAV-------------VVAVSRSN 103
+YA++A G IW + +S G VVN +AV + A+
Sbjct: 125 VVYALDARTGEEIWVYDPEVSGEDAAKGCCDVVNRGLAVYEGKVFVGVFDGRLEALDAKT 184
Query: 104 GELVWS-TQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNG 162
G +VWS +D IT + V +G E RG + D G
Sbjct: 185 GAVVWSNVTVDQSKPYTITGAPRVIKDKVIIGNGGAE--------LGVRGYVTAYDTDTG 236
Query: 163 RIIWQTYMLPDNGGKRGGYSGAAV--------WGSSPA----------IDVIRRQKQNNQ 204
++W+ Y +P+ + G + WG + A D I N+Q
Sbjct: 237 DLVWRFYTVPNPNKEPDGAISDEIFAKLANETWGDTGAWTTDGGGGTVWDAIVYDHVNDQ 296
Query: 205 T----------TKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPN 254
+ +++ +SI+A+D D+G W D++ +T
Sbjct: 297 VLLGVGNGSPWNAAIRDPEGNGDNLFLSSILAVDADTGAYKWHYQTTPRDMWDYTATQ-- 354
Query: 255 NPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
P L AD L + +G R VV+ K+GF + D SG+++
Sbjct: 355 -------PMLLAD-------LPLGVDGAPRRVVMQAPKNGFFYVLDAASGELL 393
>gi|297538449|ref|YP_003674218.1| PQQ-dependent enzyme-like protein [Methylotenera versatilis 301]
gi|297257796|gb|ADI29641.1| PQQ-dependent enzyme-like protein [Methylotenera versatilis 301]
Length = 606
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 84/399 (21%), Positives = 140/399 (35%), Gaps = 119/399 (29%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAG--KDISATPAVANGVVYFPSWNG 58
W + G D N+R + IN V++L+L W F +G ATP V GV+Y
Sbjct: 48 WPSFGRDFTNQRLS-PLTQINQQNVKDLKLAWQFKSGVVASFQATPIVTGGVMYVALPFN 106
Query: 59 YLYAVNAFNGALIW------EQNLSKLTGLSGTGIVVN-------VTVAVVVAVSRSNGE 105
++ A++A G +W N G + G+ V+ A ++A+ +G
Sbjct: 107 HVVALDAKTGKELWRYKHERRANWKMCCGPANRGVAVSDGKVFIGTVDARLIALDAKSGA 166
Query: 106 LVWS----------------TQIDPRPRSQ--------ITMSGSVYMGAFYVGLSSLEEA 141
+W +Q D + + I M+ VY G VG++ +
Sbjct: 167 KIWDIDVADDTALTEKTSSLSQADAKSHKEAYGGTGVGIAMAPVVYHGKVIVGITGVGYG 226
Query: 142 LPADQCCTFR---------------GSLAKLDVRNGRIIWQTYMLPDNG----------- 175
L DQ G LA DV NG+ IW +P G
Sbjct: 227 LHIDQPTANAPLGAVVGVDGRYGRPGFLAAYDVANGKRIWTFDTIPTQGWEGVFAETTSD 286
Query: 176 ---------GKRGG---------YSGAAVWGSSPAIDVIRR---------QKQNNQTTKP 208
++ + G + W S+PAID Q N ++P
Sbjct: 287 GISLNRDVAAEKANMVNNKDAWRFGGGSAW-STPAIDTKTNTLFFGTGNPSPQMNDISRP 345
Query: 209 THPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADF 268
++Y S+VALD ++G++ W +D++ + D
Sbjct: 346 -------GDNLYTVSLVALDTETGQLKWHYQQVPHDVWGY------------------DL 380
Query: 269 GEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
P+L +G V K+G+ + DR +G ++
Sbjct: 381 ASPPVLFDYKKDGNTIAAVGQASKTGWYYVNDRATGKLL 419
>gi|223939640|ref|ZP_03631514.1| Pyrrolo-quinoline quinone [bacterium Ellin514]
gi|223891691|gb|EEF58178.1| Pyrrolo-quinoline quinone [bacterium Ellin514]
Length = 1008
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 85/341 (24%), Positives = 134/341 (39%), Gaps = 63/341 (18%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFY---AGKDISATPAVANGVVYFPSWN 57
W GD RY+ G I V++L++ W+++ A +I P +ANGV++ P+
Sbjct: 353 WHRSQGDNAGTRYS-GLTQITCQNVKDLQVAWTYHSKDAAGNIQCNPIIANGVMFAPTPG 411
Query: 58 GYLYAVNAFNGALIWE---------QNLSKLTGLSGTGIVVNVTVA-VVVAVSRSNGELV 107
+ AVNA G +W + L TG +G V + A++ G L+
Sbjct: 412 KCIVAVNAATGEELWRFKPDGRPAFRGLIYWTGSNGISERVMFCAGRFLYALNPKTGHLL 471
Query: 108 WSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCT--FRGSLAKLDVRNGRII 165
D R I + G+ G F G ++ A+ F + D G
Sbjct: 472 TDFGRDGR----IELPGAA-QGDF--GAATAAPAIYDHTIIVPGFEKDVWAFDAVTGAHR 524
Query: 166 WQTYMLPDNGG------KRGGYSGAAVWGSSPAIDVIR--------RQKQNNQTTKPTHP 211
W + +P G R + GA W A+D R K+N T+
Sbjct: 525 WTFHTIPQPGEFGADTWDRLEHYGANCWAGM-ALDETRGIAFITTGSPKENFIGTR---- 579
Query: 212 DQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEA 271
+ +++AN ++ALD +G+ W +DI+ D D
Sbjct: 580 --HLGQNLFANCLIALDARTGKRLWHFQEIRHDIW------------------DLDIPAP 619
Query: 272 PMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDIIW-FKL 311
P L TI+ +G+ DVV AV K G DR +G I+ F+L
Sbjct: 620 PNLTTITRDGKRIDVVTAVTKIGNTLLLDRVTGKPIFPFRL 660
>gi|334131170|ref|ZP_08504936.1| PQQ-dependent dehydrogenase [Methyloversatilis universalis FAM5]
gi|333443800|gb|EGK71761.1| PQQ-dependent dehydrogenase [Methyloversatilis universalis FAM5]
Length = 563
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 73/313 (23%), Positives = 124/313 (39%), Gaps = 57/313 (18%)
Query: 20 INPVTVRNLRLRWSFYAG---KDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWE--Q 74
+N V+ L++ W G + ATP V +GV+Y S N ++A++A G IW+
Sbjct: 63 VNRDNVKKLKVAWIHQPGTITHGLQATPIVIDGVMYSISANNNVWAIDAATGKTIWQYAP 122
Query: 75 NLSKLT-----GLSGTGIVVNVTVAVV-------VAVSRSNGELVWSTQIDPRPRSQI-- 120
L K+ G + G+ V + +A+ + G+ VWSTQ+ P++Q
Sbjct: 123 KLDKIVDQVFYGAASRGVTVGRGKVFLGTLDGRFIALDQKTGKEVWSTQLT-NPKTQYGA 181
Query: 121 ------TMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDN 174
++G V G G + + A T + + +RN W P +
Sbjct: 182 LFSAPPQLAGDVLFGGTTGGDQPISGKIYAVNADTGKPAWTFDVIRNDPKSW-----PGD 236
Query: 175 GGKRGGYSGAAVWGSSPAIDVIRRQKQNNQTTKPTHPDQCISSD-IYANSIVALDIDSGR 233
GK GG S D I N P + + D +Y +++ALD SG+
Sbjct: 237 SGKVGGGSAWMPGTYDAKSDTIYIGTSN---AAPDYYNYDRKGDNLYTATLLALDPKSGK 293
Query: 234 IAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKS 293
+ W + +D + D+ A L + +G +DV+V + K
Sbjct: 294 VKWHRQEVPHDSW--------------------DYDSAYEALVVQKDG--KDVIVHLNKG 331
Query: 294 GFAWAFDRDSGDI 306
GF + D+ G +
Sbjct: 332 GFVFVMDKKDGKL 344
>gi|116621067|ref|YP_823223.1| pyrrolo-quinoline quinone [Candidatus Solibacter usitatus
Ellin6076]
gi|116224229|gb|ABJ82938.1| Pyrrolo-quinoline quinone [Candidatus Solibacter usitatus
Ellin6076]
Length = 754
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 71/334 (21%), Positives = 120/334 (35%), Gaps = 75/334 (22%)
Query: 20 INPVTVRNLRLRWSFYAGKDISA-TPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSK 78
IN V + + WS+ A S P V + V Y + G L A++A G +W +
Sbjct: 51 INASNVSRMEVAWSYPAPDGTSVFCPLVVDNVAYLAAKGGALVALDATTGKELWAHSFGT 110
Query: 79 ---------------------------LTGLSGTGIVVNVTVAVVVAVSRSNGELVWSTQ 111
L SG ++ + +G+L
Sbjct: 111 GGGGRGGISGQRGANYWESKDRKDRRILVTASGFLHAIDALTGKTIESFADHGKLDLKIG 170
Query: 112 ID--PRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTY 169
ID P P + T G ++ +G + P + G L DVR G++ W +
Sbjct: 171 IDRAPIPLASRT-PGRIFENLIILG------SFPGEGYLAPPGDLRAFDVRTGKLAWVFH 223
Query: 170 MLPDNGG------KRGGYS---GAAVWGSSPAIDVIRRQKQN------NQTTKPTHPDQC 214
+P G + Y G VWG ++ +K+ + +
Sbjct: 224 TIPHEGELGYDTWPKDAYKYMGGVDVWG-----EITVDEKRGIAYFPVSSAKYELYGGDR 278
Query: 215 ISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPML 274
++++A+ ++ALD +G+ W +DI+ D D AP L
Sbjct: 279 PGNNLFADCLLALDARTGKYLWHFQTVHHDIW------------------DYDPTAAPQL 320
Query: 275 LTISTNGRFRDVVVAVQKSGFAWAFDRDSGDIIW 308
+T +G+ DVV K+GF + FDR +G +W
Sbjct: 321 VTAKHDGKTVDVVALASKNGFLYVFDRVTGKPLW 354
>gi|349699707|ref|ZP_08901336.1| PQQ-dependent dehydrogenase, methanol/ethanol family protein
[Gluconacetobacter europaeus LMG 18494]
Length = 720
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 78/360 (21%), Positives = 134/360 (37%), Gaps = 82/360 (22%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFY--AGKDISATPAVANGVVYFPSWNG 58
WL HG + +RY+ IN T+ L L W + + ATP + NGV+Y +
Sbjct: 54 WLTHGRTYSEQRYS-PLTQINAKTIGRLHLAWHYDLDTNRGQEATPLIVNGVMYTTTAWS 112
Query: 59 YLYAVNAFNGALIW--EQNLSKLTGLSGTGIVVNVTVAV-------------VVAVSRSN 103
+ A++A G L+W + + G+ G +VN + ++A+ +
Sbjct: 113 KVKALDAATGRLLWSYDPKVDGRVGVRGCCDIVNRGLGYWNGRLYLATFDNRLIALDSKD 172
Query: 104 GELVWS-----TQIDPRPRSQITMSGS--VYMGAFYVGLSSLEEALPADQCCTFRGSLAK 156
G++VWS T D + T++G+ + G +G E RG ++
Sbjct: 173 GKVVWSVNTIPTDADLGQQQAYTITGAPRIAKGRVLIGNGGAEFGA--------RGFISA 224
Query: 157 LDVRNGRIIWQTYMLPDNGGK--------------------------RGGYSGAAVWGS- 189
D GR+ W+ + +P+ + +GG G VW S
Sbjct: 225 FDAETGRLDWRFFTVPNPHNRPDHAPSDTVLMTRAYPTWSPTGAWVRQGG--GGTVWDSI 282
Query: 190 --SPAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFY 247
P D++ N +++ +SIVA+ ++G W F
Sbjct: 283 VYDPVTDLVYFGAGNGSPWSYGIRSNGKGDNLFLDSIVAVKPETGEYVWH--------FQ 334
Query: 248 FTCLVPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
T P D + M L + G+ R V+V K+GF + D +G+ I
Sbjct: 335 ET----------PEDQWDYTSTQQIMTLDLPLGGQMRHVIVHAPKNGFFYVLDAATGEFI 384
>gi|386401152|ref|ZP_10085930.1| PQQ-dependent dehydrogenase, methanol/ethanol family
[Bradyrhizobium sp. WSM1253]
gi|385741778|gb|EIG61974.1| PQQ-dependent dehydrogenase, methanol/ethanol family
[Bradyrhizobium sp. WSM1253]
Length = 554
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 78/339 (23%), Positives = 137/339 (40%), Gaps = 68/339 (20%)
Query: 2 LNHGGDLNNRRYAYGEVLINPVTVRNLRLRW--SFYAGKDISATPAVANGVVYFPSWNGY 59
LN+G N +R++ IN +V+NL W SF + + P V GV+Y S N
Sbjct: 37 LNYGMGYNLQRFSTLN-QINKDSVKNLVPVWHYSFNDDRSEESQPLVYQGVIYVTSHNAT 95
Query: 60 LYAVNAFNGALIWEQN---------------LSKLTGLSGTGIVVNVTVAVVVAVSRSNG 104
+ AV+A G IW+ +++ L + A V+A+ +G
Sbjct: 96 M-AVDAKTGKQIWKSKVEYPAETPRIVCCGIINRGAALYDGKVFRTTLDANVIALDAKDG 154
Query: 105 ELVWSTQI-DPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGR 163
+ +W + D + +T++ V G G+S E RG + D G+
Sbjct: 155 KELWRQKAADIKEGYSMTVAPLVADGVVITGISGAEFGT--------RGFIDGWDPATGK 206
Query: 164 IIWQTYMLP---DNGG--------KRGGYSGAAVWGSSPAIDVIRRQKQN----NQTTKP 208
+W+T+ +P + GG K GG S P ++ + N N +P
Sbjct: 207 HLWRTHSIPSPDEPGGDTWKGDTWKLGGGSTWITGSYDPELNTVYWGIGNPGPFNSAVRP 266
Query: 209 THPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADF 268
++Y S++A+D +G+I W + F+ PNNP D D
Sbjct: 267 -------GDNLYTCSVLAMDPKTGKIKWH--------YQFS---PNNP-------FDYDS 301
Query: 269 GEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
+L ++ G+ V++ ++GF + DR +G ++
Sbjct: 302 VAEMVLADMNVEGKPTKVLMDANRNGFFYVLDRTNGKLL 340
>gi|253996583|ref|YP_003048647.1| Pyrrolo-quinoline quinone [Methylotenera mobilis JLW8]
gi|253983262|gb|ACT48120.1| Pyrrolo-quinoline quinone [Methylotenera mobilis JLW8]
Length = 596
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 83/399 (20%), Positives = 138/399 (34%), Gaps = 119/399 (29%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAGKDIS--ATPAVANGVVYFPSWNG 58
W HG D N+R + IN + L L WSF G S ATP V NGV+Y
Sbjct: 39 WPLHGRDYTNQRLS-PLTQINTQNINKLSLAWSFKTGVSASFQATPIVQNGVMYVALPYN 97
Query: 59 YLYAVNAFNGALIWEQN-------------LSKLTGLSGTGIVVNVTVAVVVAVSRSNGE 105
++ A++A G IW S+ +S + + A ++A+ +G
Sbjct: 98 HVVALDAKTGKEIWRYQHNRKADWKMCCGPASRGVAVSDGKVFIGTVDARLIALDAKSGL 157
Query: 106 LVWSTQI----------------DPRPRSQ--------ITMSGSVYMGAFYVGLSSLEEA 141
+W + D + + + I M+ VY G VG++ +
Sbjct: 158 KLWDIDVAEDTALTENTGLLSKADAKSKKERYGGTGIGIAMAPVVYRGKVIVGVTGVGYG 217
Query: 142 LPADQCCT---------------FRGSLAKLDVRNGRIIWQTYMLPDNGGKRG------- 179
L D+ G +A DV NG +WQ +P G +
Sbjct: 218 LHIDKPRIDAPLGAVVGVSGQYGRSGFMAAFDVHNGAKVWQFDTIPSQGWEGAFAETTSD 277
Query: 180 ----------------------GYSGAAVWGSSPAIDVIRR---------QKQNNQTTKP 208
+ G + W ++PAID Q N ++P
Sbjct: 278 GVQLNRDIAAEKENLKTHQDAWKFGGGSAW-TTPAIDTKTNTLFFGTGNPSPQMNDVSRP 336
Query: 209 THPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADF 268
++Y S+VAL+ ++G+I W +D++ + D
Sbjct: 337 -------GDNLYTVSLVALNTETGKIKWHYQQVPHDVWGY------------------DV 371
Query: 269 GEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
P+L NG+ V K+G+ + DR +G ++
Sbjct: 372 ASPPVLFDYVKNGKKIAAVGQAGKTGWYYVNDRKTGVLL 410
>gi|410030923|ref|ZP_11280753.1| quinoprotein glucose dehydrogenase [Marinilabilia sp. AK2]
Length = 708
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 81/355 (22%), Positives = 135/355 (38%), Gaps = 75/355 (21%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAG-----KDISATPAVANGVVYFPS 55
W + GG + RY+ I V+NL W+FY G I P V +G++Y S
Sbjct: 32 WEHFGGTNDAARYS-SHSQITKENVKNLEQAWAFYTGDATERSQIQTQPIVVDGILYGVS 90
Query: 56 WNGYLYAVNAFNGALIWEQNLSKLTGLSGTGIVVNVTVAV----------------VVAV 99
++A+ A G +W N +L G + VN +A ++A+
Sbjct: 91 PQINVFALKADTGKPLWRFNPFQLLGGENSWAGVNRGLAYWEEGQDKRIFFSASNYLIAL 150
Query: 100 SRSNGELVWS----------TQIDPRPRSQITMS---GSVYMGAFYVGLSSLEEALPADQ 146
G + S +D + +S G +Y +G+ L E L A
Sbjct: 151 EAETGRPIESFGEKGMVDLKKDLDTDLEDFLLVSNTPGIIYKDKIILGMR-LSEGLDAAP 209
Query: 147 CCTFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYS-----------GAAVWGSSPAIDV 195
G + +V+ G+ W + +P G + GY GA W ++D
Sbjct: 210 -----GHIRAYNVKTGKREWIFHTIPMEG--QYGYDTWDPNYIEYIGGANNWAGM-SLDE 261
Query: 196 IR--RQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVP 253
R T S+++ANS++ALD ++G+ W +D++
Sbjct: 262 NRGIVYVPTGSATYDFWGGYRHGSNLFANSLIALDANTGQRIWHFQGVHHDMW------- 314
Query: 254 NNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDIIW 308
D DF P L+ I +G++ D V K G+ + FDR +G+ +W
Sbjct: 315 -----------DRDFPANPNLIRIKKDGKWIDAVAQTSKQGYVYVFDRVTGEPVW 358
>gi|390957640|ref|YP_006421397.1| glucose dehydrogenase [Terriglobus roseus DSM 18391]
gi|390412558|gb|AFL88062.1| glucose dehydrogenase [Terriglobus roseus DSM 18391]
Length = 740
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 82/346 (23%), Positives = 130/346 (37%), Gaps = 74/346 (21%)
Query: 7 DLNNRRYAYGEVLINPVTVRNLRLRWSF---YAGKDISATPAVANGVVYFPSWNGYLYAV 63
D + RY+ G IN V+NL+ W + G+ P V +GV+Y S G A+
Sbjct: 37 DAGHTRYS-GLSEINRGNVQNLKPVWVYDTGVKGRTWQGNPIVVDGVMYL-SIPGGASAI 94
Query: 64 NAFNGALIWE---QNLSKLTGLSG----------TGIVVNVTVAVVVAVSRSNGELV--- 107
+ G +W+ + +S+ G T ++ TV + A+ G V
Sbjct: 95 DPETGKELWKFVPKGISRPGRDRGVAYWPGDGALTPRIIYATVDRLYALDAVTGVPVGGF 154
Query: 108 --------WSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDV 159
D P + T+S A Y L+ + + G DV
Sbjct: 155 GKDGLVNLRDDVADKYPNALYTISSPA---AIYKNLAIISPSTQEFGSKGPSGDPRAFDV 211
Query: 160 RNGRIIWQTYMLPDNGGKRGG---------YSGAAVWGSSPA--------IDVIRRQKQN 202
R G+++W+ + +P G + G +G + WG + I +
Sbjct: 212 RTGKLVWRFHTVPQPGEPQDGSWGPEGWKERAGPSAWGGATVDAATGLVFIPIGNPDDSY 271
Query: 203 NQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGP 262
N +P + YANSIVALD +G + W + FT N+ D P
Sbjct: 272 NGVDRP-------GKNYYANSIVALDAATGTLKW--------FYQFTHHDINDVDAP--- 313
Query: 263 NLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDIIW 308
AP L+ I NG+ +V V KSG A+ DR +G ++
Sbjct: 314 -------AAPSLIDIRRNGQLIPALVEVPKSGLAFVLDRRTGKPVF 352
>gi|186471236|ref|YP_001862554.1| methanol/ethanol family PQQ-dependent dehydrogenase [Burkholderia
phymatum STM815]
gi|184197545|gb|ACC75508.1| PQQ-dependent dehydrogenase, methanol/ethanol family [Burkholderia
phymatum STM815]
Length = 606
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 80/359 (22%), Positives = 139/359 (38%), Gaps = 82/359 (22%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAG--KDISATPAVANGVVYFPS-WN 57
W GD N RY+ + IN V L++ W+ G + +P V +Y S +
Sbjct: 39 WAAQAGDYANHRYSPLK-QINESNVGKLQVAWTMSTGVLRGHEGSPLVIGDTMYIHSPFP 97
Query: 58 GYLYAVNAFNGALIWE----QNLSKLT---------GLS-GTG-IVVNVTVAVVVAVSRS 102
+ A+N + IW+ Q+ S ++ GL+ G G I + +VA++
Sbjct: 98 NKVIAINLKDQTFIWQYEPKQDASVISVMCCDTVNRGLAYGDGKIFLQQADTKLVALNAK 157
Query: 103 NGELVWSTQI-DPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRN 161
GE+VW+ Q DP+ T + V+ G+S E + RG L D++
Sbjct: 158 TGEVVWTAQNGDPKAGETNTNAPHVFGDKVLTGISGGEFGV--------RGRLIAYDIKT 209
Query: 162 GRIIWQTYML-PDN-----------------------------GGKRGGYSGAAVWG--- 188
G+ W+ Y PDN G + G WG
Sbjct: 210 GKEAWKAYSTGPDNEMLLDPQQTMTWADGKMQPVGADSSIKSWKGDQWKLGGGTTWGWYA 269
Query: 189 SSPAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYF 248
P ++++ N T PT Q + ++ SI A D+++G+ W ++
Sbjct: 270 WDPKLNLVYYGTGNPGTWNPT---QRPGDNKWSMSIFARDLNTGKAKW--------VYQM 318
Query: 249 TCLVPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
T P D D +L I+ NG+ +V ++GF + +R++G+++
Sbjct: 319 T----------PHDEWDYDGVNEMILADIAVNGKKTPAIVHFDRNGFGYTLNRETGELL 367
>gi|367475331|ref|ZP_09474794.1| PQQ-dependent dehydrogenase, methanol/ethanol family
[Bradyrhizobium sp. ORS 285]
gi|365272344|emb|CCD87262.1| PQQ-dependent dehydrogenase, methanol/ethanol family
[Bradyrhizobium sp. ORS 285]
Length = 631
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 81/359 (22%), Positives = 137/359 (38%), Gaps = 82/359 (22%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAGKD--ISATPAVANGVVYFPS--- 55
W D N RY+ + IN L+L W+F G D A P V + +Y
Sbjct: 41 WPMPARDYANTRYSPLD-QINTSNAGQLQLAWTFSVGVDRGQEAAPIVIDNTMYVVGPYD 99
Query: 56 --WNGYLYAVNAFNGALIWEQNLSKLTGLSGTGI--VVNVTVAV-------------VVA 98
+ ++A++A G L W G VVN +A VA
Sbjct: 100 GPYPNRVFAIDATTGELKWSYAPRPEPAAKGVACCDVVNRGLAFDNGKVFLNTLDDNTVA 159
Query: 99 VSRSNGELVWSTQIDPRPRSQ-ITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKL 157
+ + G+ +W T++ + + ITM+ V G VG S E + RG + L
Sbjct: 160 IDANTGKEIWHTKLGEINKGETITMAPIVAKGKVIVGNSGGELGV--------RGWVTAL 211
Query: 158 DVRNGRIIWQTYML-PDNG---------------GKRGGYS----------GAAVWG--- 188
D G I W+ Y PD GK G + G +WG
Sbjct: 212 DENTGAIAWRAYATGPDKDVLIGDDFKPFYDSFKGKDLGVTSWPADRWRTGGGTMWGWVS 271
Query: 189 SSPAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYF 248
PA+++I N P + +Q ++++++I D+D+G+ WA + +D+F
Sbjct: 272 FDPALNMIFFGTAN---PSPWNANQRKGDNLWSSTIFGRDVDTGQAKWAYQVNPHDLF-- 326
Query: 249 TCLVPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
D D +L+ + G+ R ++ ++G+ + DR +G++I
Sbjct: 327 ----------------DHDEINENVLVDLDIGGKTRKALIHPGRNGYMYVMDRTTGEVI 369
>gi|330993470|ref|ZP_08317405.1| Alcohol dehydrogenase [Gluconacetobacter sp. SXCC-1]
gi|329759500|gb|EGG76009.1| Alcohol dehydrogenase [Gluconacetobacter sp. SXCC-1]
Length = 739
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 77/361 (21%), Positives = 131/361 (36%), Gaps = 84/361 (23%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRW--SFYAGKDISATPAVANGVVYFPSWNG 58
W+ +G + +RY+ + IN V NL+L W + TP V +GV+Y +
Sbjct: 56 WMTYGRTYSEQRYSPLD-QINRSNVGNLKLAWYLDLDTNRGQEGTPLVVDGVMYATTNWS 114
Query: 59 YLYAVNAFNGALIWEQNLSKLTGLSGTGIVVNVTVAV---------------VVAVSRSN 103
+ AV+A G L+W + ++ G V ++A+
Sbjct: 115 MMKAVDAATGKLLWSYDPRVPGNIADKGCCDTVNRGAAYWNGKVYFGTFDGRLIALDAKT 174
Query: 104 GELVWSTQIDPRPRSQI------TMSGS--VYMGAFYVGLSSLEEALPADQCCTFRGSLA 155
G+LVWS P P +Q+ T+ G+ + G +G E RG +
Sbjct: 175 GKLVWSVNTIP-PEAQLGKQRSYTVDGAPRIAKGRVIIGNGGSEFGA--------RGFVT 225
Query: 156 KLDVRNGRIIWQTYMLPDNGG--------------------------KRGGYSGAAVWGS 189
D G++ W+ + +P+ ++GG G VW S
Sbjct: 226 AFDAETGKVDWRFFTVPNPKNEPDHAASDSVLMNKAYQTWSPTGAWTRQGG--GGTVWDS 283
Query: 190 ---SPAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIF 246
P D++ N + + +++ SIVAL ++G W D +
Sbjct: 284 IVYDPVADLVYLGVGNGSPWNYKYRSEGKGDNLFLGSIVALKPETGEYVWHFQETPMDQW 343
Query: 247 YFTCLVPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDI 306
FT + + M L + NG R V+V K+GF + D +G+
Sbjct: 344 DFTSV------------------QQIMTLDLPINGETRHVIVHAPKNGFFYIIDAKTGEF 385
Query: 307 I 307
I
Sbjct: 386 I 386
>gi|320107911|ref|YP_004183501.1| PQQ-dependent enzyme-like protein [Terriglobus saanensis SP1PR4]
gi|319926432|gb|ADV83507.1| PQQ-dependent enzyme-like protein [Terriglobus saanensis SP1PR4]
Length = 538
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 71/341 (20%), Positives = 130/341 (38%), Gaps = 80/341 (23%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSF-YAGKDISATPAVANGVVYFPSWNGY 59
W + GD++ RR++ + I+ V++L L W+F G + TP V NG++Y + +
Sbjct: 52 WTTYNGDISGRRFSTLKQ-IHRENVKSLTLAWAFPTHGPQLKGTPLVVNGIMYLTAPD-K 109
Query: 60 LYAVNAFNGALIWEQ---NLSKLTGLSGTG-----IVVNVTVAVVVAVSRSNGELVWSTQ 111
++A++A +G +W+ ++ G G + A +V + +G+ +W +
Sbjct: 110 VWAIDARSGQQVWQHTRISVGNHIGQRGVAFYQDRLYFGTPDAHLVCIRAKDGKQLWDVE 169
Query: 112 I-DPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYM 170
I D ++ + V G +G S + +P L D G W+T
Sbjct: 170 IADKTFGYYLSAAPIVVKGHVLIGTSGDQANVPH--------FLESRDWETGAKQWRTES 221
Query: 171 LPDNGG---------KRGGYSGAAVWGS-----------------SPAIDVIRRQKQNNQ 204
LP G K + G +W S P +D + R+ N
Sbjct: 222 LPKPGAPGSETWPDAKSMSHGGGPMWLSGTYDAALNLVYVGTGNPHPVLDGLARKGDN-- 279
Query: 205 TTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNL 264
++ + I+A++ D+G I W YF P
Sbjct: 280 --------------LFTSCILAINPDTGAIVW----------YF--------QVSPHDTH 307
Query: 265 DADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGD 305
D D E +L G+ R ++ ++GF + DR +G+
Sbjct: 308 DFDAVETTILFDGDFKGKPRKMLAQASRNGFFFLLDRQTGE 348
>gi|257372980|ref|YP_003175754.1| serine/threonine protein kinase [Halomicrobium mukohataei DSM
12286]
gi|257167704|gb|ACV49396.1| serine/threonine protein kinase [Halomicrobium mukohataei DSM
12286]
Length = 795
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 57/116 (49%), Gaps = 6/116 (5%)
Query: 31 RWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG---LSGTGI 87
+W+F G + P VA+G VYF G LYAV A +G W + + +SG +
Sbjct: 561 QWTFETGSHVYGPPTVADGTVYFGGRGGTLYAVAADSGEQRWRVDCGAIKSAPTVSGGTV 620
Query: 88 VVNVTVAVVVAVSRSNGELVWSTQIDPRP--RSQITMSGSVYMGAFYVGLSSLEEA 141
V V AV +GE VW+ Q + RP S + GSVY+G + L +L+ +
Sbjct: 621 YVGTKAETVHAVDAHSGETVWTYQTE-RPVWSSPAVVDGSVYVGCWDDSLYALDRS 675
Score = 38.9 bits (89), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 48/107 (44%), Gaps = 14/107 (13%)
Query: 32 WSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIW----EQNLSKLTGLSGTGI 87
W++ + + ++PAV +G VY W+ LYA++ G L W E+++ + +
Sbjct: 641 WTYQTERPVWSSPAVVDGSVYVGCWDDSLYALDRSTGDLDWQFDTERSIPGSVAVRDDSL 700
Query: 88 VVNVTVAVVVAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVG 134
V V A+ ++GE W Q ++SGSV +G
Sbjct: 701 FVGNNANNVYALDPTSGESRW----------QQSLSGSVRTAVAVLG 737
>gi|392951650|ref|ZP_10317205.1| methanol/ethanol family PQQ-dependent dehydrogenase
[Hydrocarboniphaga effusa AP103]
gi|391860612|gb|EIT71140.1| methanol/ethanol family PQQ-dependent dehydrogenase
[Hydrocarboniphaga effusa AP103]
Length = 735
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 80/350 (22%), Positives = 129/350 (36%), Gaps = 72/350 (20%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAGKD--ISATPAVANGVVYFPSWNG 58
W++ G + +RY+ + + + V L L W + D + ATP V +GV+Y
Sbjct: 73 WMSTGRTYDEQRYSPLKKITDQ-NVGQLGLAWQYKLDYDRGVEATPIVVDGVMYTTGSFS 131
Query: 59 YLYAVNAFNGALIW--EQNLSKLTGLSGTGIVVNVTVAV-------------VVAVSRSN 103
LYA NA G L+W + + +L VN AV +VA + +
Sbjct: 132 VLYAFNAATGELLWKGDPQVDRLKAGEFCCDAVNRGAAVWKGKVYVGTNDGRLVAWNAKD 191
Query: 104 GELVW--STQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRN 161
G W T +D IT + + +G E + RG + D
Sbjct: 192 GSKAWDIDTVVDRSRSYGITGAPRIMKDKVIIGNGGAEFGV--------RGYITAYDAET 243
Query: 162 GRIIWQTYMLP---------------------DNGGKRGGYSGAAVWGS---SPAIDVIR 197
G+ +W+ Y +P N K+GG G VW S P ++++
Sbjct: 244 GKQLWRFYTVPGDPAKPQENKALEAALKTWDGTNWVKQGG--GGTVWDSMAYDPDLNLLY 301
Query: 198 RQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPD 257
N ++Y +SIVA++ D+G W Y T
Sbjct: 302 IGTGNASYWNYKTRSNAKGDNLYLSSIVAINPDTGEYVW---------HYQTT------- 345
Query: 258 CPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
PG D + +L + G R V++ K+GF + DR +G +I
Sbjct: 346 --PGDAWDFTATQHMILADLDIKGAKRKVIMQAPKNGFFYVIDRATGKLI 393
>gi|116625816|ref|YP_827972.1| pyrrolo-quinoline quinone [Candidatus Solibacter usitatus
Ellin6076]
gi|116228978|gb|ABJ87687.1| Pyrrolo-quinoline quinone [Candidatus Solibacter usitatus
Ellin6076]
Length = 814
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 73/342 (21%), Positives = 124/342 (36%), Gaps = 60/342 (17%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAGKDISATPAVANGVVYFPSWNGYL 60
W+++GG ++ Y + I V L + W++ G + P V V+Y + N L
Sbjct: 35 WMDYGGGTDSSHYTRSK-QITKANVGQLEVAWAYPHG-ETGFNPIVVGNVMYTVARNSSL 92
Query: 61 YAVNAFNGALIW-EQNLSKLTG-----------------------LSGTGIVVNVTVAVV 96
A++A G IW + LS +T L V +TV
Sbjct: 93 VALDATTGKEIWVHEGLSGITSRGMNYWESKDRKDRRLIFAVNSYLQEIDAVTGLTVMSF 152
Query: 97 VAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAK 156
N + R Q G V+ +G + P ++ + G L
Sbjct: 153 GQKGVVNLREGLERDVSSMGRVQSRSPGKVFENLVILG------SAPGEEYVSPPGDLRA 206
Query: 157 LDVRNGRIIWQTYMLPDNGGKRGGYSGAAVW----GSSPAIDVIRRQKQN------NQTT 206
DV +G+++WQ + +P G W G++ D+ K T
Sbjct: 207 YDVISGKLVWQFHTVPYPGEPHYDTFPKDAWKYIGGNNTWGDLTIDAKNGIAFFPLGSPT 266
Query: 207 KPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDA 266
+ + +Y + ++ALD +G+ W +D++ D
Sbjct: 267 YDFYGADRKGAGLYGDCLLALDARTGKYLWHFQTVHHDLW------------------DY 308
Query: 267 DFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDIIW 308
D AP L TI +G+ +VV K+GF + F+R +G IW
Sbjct: 309 DLTSAPQLTTIKRDGKEVEVVAEAGKTGFLFVFERKTGKPIW 350
>gi|255034807|ref|YP_003085428.1| quinoprotein glucose dehydrogenase [Dyadobacter fermentans DSM
18053]
gi|254947563|gb|ACT92263.1| Quinoprotein glucose dehydrogenase [Dyadobacter fermentans DSM
18053]
Length = 732
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 85/365 (23%), Positives = 137/365 (37%), Gaps = 88/365 (24%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAGK---------DISATPAVANGVV 51
W +GG+ RY+ +N V+ L+ W++ G+ DI P V +G++
Sbjct: 33 WPVYGGNNAGNRYS-SLTQVNKENVKKLQPAWTYDTGENNKPGERGMDIQCQPIVIDGIM 91
Query: 52 YFPSWNGYLYAVNAFNGALIW-----EQNLSKLTGLSG------------------TGIV 88
Y + ++A+ A G +W E + + G +
Sbjct: 92 YGTTPRLKVFAIEAATGRELWKFDPFEGKRPRFHPMRGVVYWAEGKDKRILFTAGPSLFA 151
Query: 89 VNVTVAVVVAVSRSNGELVWSTQI--------DPRPRS-QITMSGSVYMGAFYVGLSSLE 139
+N +V NGE+ + + DP + + T G +Y G S E
Sbjct: 152 LNAETGKLVETFGKNGEVDFHDGLGDKETYGYDPYQFNIRNTTPGVIYKNLLITGSSVSE 211
Query: 140 --EALPADQCCTFRGSLAKLDVRNGRIIW--QTYMLPDNGG----KRGGYS---GAAVWG 188
+ALP G + DVR G++ W +T LP G + Y GA W
Sbjct: 212 GGDALP--------GHIRAFDVRTGKVAWVFRTIPLPGEYGYDTWSKDSYKKLGGANCWA 263
Query: 189 SSPAIDVIRRQKQNNQTTKPT-----HPDQCISSDIYANSIVALDIDSGRIAWAKPLGGY 243
ID +R T P+ P + I +++AN ++ALD SGR W +
Sbjct: 264 GM-VIDE-KRGMVFLGTGSPSVDFYGGPRKGI--NLFANCVIALDARSGRRVWHYQTVHH 319
Query: 244 DIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDS 303
D++ D D P L+ + NGR D V K G+ + FDRD+
Sbjct: 320 DLW------------------DRDIPCPPNLIRVRRNGRMVDAVAQATKDGYIFIFDRDT 361
Query: 304 GDIIW 308
G ++
Sbjct: 362 GKPLF 366
>gi|118556|sp|P28036.1|DHET_ACEPO RecName: Full=Alcohol dehydrogenase [cytochrome c]; Flags:
Precursor
gi|216186|dbj|BAA00528.1| alcohol dehydrogenase [Gluconacetobacter polyoxogenes]
Length = 738
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 75/358 (20%), Positives = 131/358 (36%), Gaps = 79/358 (22%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRW--SFYAGKDISATPAVANGVVYFPSWNG 58
W+ +G +++RY+ + IN V NL+L W + TP V +GV+Y +
Sbjct: 56 WMTYGRTYSDQRYSPLD-QINRSNVGNLKLAWYLDLDTNRGQEGTPLVIDGVMYATTNWS 114
Query: 59 YLYAVNAFNGALIWEQNLSKLTGLSGTGIVVNVTVAV---------------VVAVSRSN 103
+ AV+A G L+W + ++ G V ++A+
Sbjct: 115 MMKAVDAATGKLLWSYDPRVPGNIADKGCCDTVNRGAAYWNGKVYFGTFDGRLIALDAKT 174
Query: 104 GELVWSTQIDPRPRSQI------TMSGS--VYMGAFYVGLSSLEEALPADQCCTFRGSLA 155
G+LVWS P P +++ T+ G+ + G +G E RG ++
Sbjct: 175 GKLVWSVNTIP-PEAELGKQRSYTVDGAPRIAKGRVIIGNGGSEFGA--------RGFVS 225
Query: 156 KLDVRNGRIIWQTYMLPDNGGKRGGYS-----------------------GAAVWGS--- 189
D G++ W+ + +P+ + S G VW S
Sbjct: 226 AFDAETGKVDWRFFTVPNPKNEPDAASDSVLMNKAYQTWSPTGAWTRQGGGGTVWDSIVY 285
Query: 190 SPAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFT 249
P D++ N + + +++ SIVAL ++G W D + FT
Sbjct: 286 DPVADLVYLGVGNGSPWNYKYRSEGKGDNLFLGSIVALKPETGEYVWHFQETPMDQWDFT 345
Query: 250 CLVPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
+ M L + NG R V+V +K+GF + D +G+ I
Sbjct: 346 S------------------DQQIMTLDLPINGETRHVIVHARKNGFFYIIDAKTGEFI 385
>gi|310820869|ref|YP_003953227.1| polyvinylalcohol dehydrogenase [Stigmatella aurantiaca DW4/3-1]
gi|309393941|gb|ADO71400.1| polyvinylalcohol dehydrogenase [Stigmatella aurantiaca DW4/3-1]
Length = 558
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 91/366 (24%), Positives = 148/366 (40%), Gaps = 65/366 (17%)
Query: 17 EVLINPVTVRNLRLRWSF---YAGKDISATPAVA----NGVVYFPSWNGYLYAVNAFNGA 69
E ++ T+ L + W F AG+ + A A G Y + G +A+++ G
Sbjct: 56 EQRLSRETISRLEVEWVFDTARAGQPVRPIHATAVIDEEGTTYVGDFAGTFFAIDS-AGM 114
Query: 70 LIW----EQNLSKLTGL----SGTGIVVNVTVAVVVAVSR-------SNGEL-------- 106
L W + ++L GL G A +A R +NG +
Sbjct: 115 LRWSFAADAPTAELAGLFPPELGPPTAAPFIGAAALAADRPYVVAGDANGRIYARDLKTG 174
Query: 107 --VWSTQ-IDPRPRSQITMSGSVYMG-AFYVGLSSLEE--------ALPADQCCTFRGSL 154
VW+ + ++P P ++ + +G +G+SSLE LP QCC+ RG+L
Sbjct: 175 AEVWTKRGLNPNPLGGVSGNSITLIGDTVLIGMSSLENYAFVLTSAGLPV-QCCSHRGAL 233
Query: 155 AKLDVRNGRIIWQ------TYMLPDNGGK-RGGYSGAAVWGSSPAIDVIRRQK--QNNQT 205
LD+ G W+ LP + G +G +W S P+ D Q
Sbjct: 234 VALDLATGEERWRYNVVEAAQPLPSSAAPFVLGPAGGDIW-SQPSYDPETNTVYISTGQN 292
Query: 206 TKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLD 265
PT ++ +++I+A+D +G+ W + DI+ VP NP+ G +D
Sbjct: 293 LSPTAEGLSTAT---SDAIIAVDFRTGQPKWVRQFTQNDIWAVG--VP-NPNPATGQLVD 346
Query: 266 ADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDIIWFKLAGPGGREGGGVW-- 323
D G+AP + + + VV A QK G D +G+++ L P + GG
Sbjct: 347 MDLGDAPKIYRLPGG---QKVVGAGQKDGRYHVVDAQTGEVVRTTLQLPPRNDLGGFQTG 403
Query: 324 GAATDG 329
GA DG
Sbjct: 404 GAVADG 409
>gi|386287229|ref|ZP_10064404.1| Pyrrolo-quinoline quinone [gamma proteobacterium BDW918]
gi|385279761|gb|EIF43698.1| Pyrrolo-quinoline quinone [gamma proteobacterium BDW918]
Length = 383
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 100/244 (40%), Gaps = 33/244 (13%)
Query: 26 RNLRLRWSFYAGKDISA-----TPAVANGVVYFPSWNGYLYAVNAFNGALIWEQN----L 76
+ L+ WS+ G + TP + ++ S NG + A+N G IW+++ +
Sbjct: 38 KKLKEAWSYSLGDGQAEAYHRITPVIDGEEIFIASSNGKIAALNKVTGKKIWKKSHDLRI 97
Query: 77 SKLTGLSGTGIVVNVTVAVVVAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLS 136
S G+SGT + V + VVA+ R G+++W+T ++ S G V + Y G
Sbjct: 98 SGGIGVSGTMLFVGTSDGEVVALDRLTGQIIWTTPVNSEVLSAPQSDGDVVVAQTYSGEV 157
Query: 137 ---SLEEALPA----DQC--CTFRGSLAKLDVR--------NGRIIWQTYMLPDNGGKRG 179
S+ + P Q T RG+ VR NGR++ +NG R
Sbjct: 158 HAFSISDGKPLWNYISQVPRLTLRGTSTPKIVRGVVMVGFANGRVV---AFDIENGAVRW 214
Query: 180 GYSGAAVWGSSPAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKP 239
+ GS+ I R + DQ + + Y I+A+DI SGR W K
Sbjct: 215 EQRISVPQGSTE----IERLVDVDGRLLVLEDDQTVIATGYQGQIMAIDIGSGRPLWGKE 270
Query: 240 LGGY 243
Y
Sbjct: 271 TSSY 274
>gi|365879794|ref|ZP_09419196.1| putative Alcohol dehydrogenase (acceptor) [Bradyrhizobium sp. ORS
375]
gi|365292217|emb|CCD91727.1| putative Alcohol dehydrogenase (acceptor) [Bradyrhizobium sp. ORS
375]
Length = 580
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/305 (21%), Positives = 121/305 (39%), Gaps = 49/305 (16%)
Query: 20 INPVTVRNLRLRWSFYAG--KDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWE---- 73
IN V+++ W+F G + A P V NGV++ + G + A+NA G W
Sbjct: 69 INTTNVKSMVPVWTFATGVIEGHEAPPLVNNGVMFITTPMGQVIALNAKTGDQYWRYKRE 128
Query: 74 --QNLSKL------TGLSGTGIVVNVTVAVVVAVSRSNGELVWSTQIDPRPRSQ-ITMSG 124
++L +L GL + + T +VA+ G+++W ++ + Q +T+
Sbjct: 129 LPEDLFQLHPTNRGVGLWQDKLYLATTDDHLVALDAKTGKVLWDKKVQDYKKGQYLTLMP 188
Query: 125 SVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNG--------G 176
+ G VG S E + RG +A D +G+ +W+T+ +P G G
Sbjct: 189 LIVDGKVMVGGSGGEFGV--------RGYVAAYDAEDGKELWRTFTIPAEGEPGHDTWSG 240
Query: 177 KRGGYSGAAVWGSSPAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAW 236
G + W + + P + ++Y +S++ALD +G+I
Sbjct: 241 DDWKNGGGSAWMTGTYDKDTKTVYWGVGNAAPWPGNLHPGDNLYTSSVIALDPATGKIK- 299
Query: 237 AKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFA 296
T + D + D D +APML+ + +GR ++ +
Sbjct: 300 ------------THFQYHQND-----SWDWDEVDAPMLVDLQRDGRTFKSLIHPGRDAIF 342
Query: 297 WAFDR 301
W +R
Sbjct: 343 WVLER 347
>gi|115374182|ref|ZP_01461469.1| polyvinylalcohol dehydrogenase, putative [Stigmatella aurantiaca
DW4/3-1]
gi|115368849|gb|EAU67797.1| polyvinylalcohol dehydrogenase, putative [Stigmatella aurantiaca
DW4/3-1]
Length = 559
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 91/366 (24%), Positives = 148/366 (40%), Gaps = 65/366 (17%)
Query: 17 EVLINPVTVRNLRLRWSF---YAGKDISATPAVA----NGVVYFPSWNGYLYAVNAFNGA 69
E ++ T+ L + W F AG+ + A A G Y + G +A+++ G
Sbjct: 57 EQRLSRETISRLEVEWVFDTARAGQPVRPIHATAVIDEEGTTYVGDFAGTFFAIDS-AGM 115
Query: 70 LIW----EQNLSKLTGL----SGTGIVVNVTVAVVVAVSR-------SNGEL-------- 106
L W + ++L GL G A +A R +NG +
Sbjct: 116 LRWSFAADAPTAELAGLFPPELGPPTAAPFIGAAALAADRPYVVAGDANGRIYARDLKTG 175
Query: 107 --VWSTQ-IDPRPRSQITMSGSVYMG-AFYVGLSSLEE--------ALPADQCCTFRGSL 154
VW+ + ++P P ++ + +G +G+SSLE LP QCC+ RG+L
Sbjct: 176 AEVWTKRGLNPNPLGGVSGNSITLIGDTVLIGMSSLENYAFVLTSAGLPV-QCCSHRGAL 234
Query: 155 AKLDVRNGRIIWQ------TYMLPDNGGK-RGGYSGAAVWGSSPAIDVIRRQK--QNNQT 205
LD+ G W+ LP + G +G +W S P+ D Q
Sbjct: 235 VALDLATGEERWRYNVVEAAQPLPSSAAPFVLGPAGGDIW-SQPSYDPETNTVYISTGQN 293
Query: 206 TKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLD 265
PT ++ +++I+A+D +G+ W + DI+ VP NP+ G +D
Sbjct: 294 LSPTAEGLSTAT---SDAIIAVDFRTGQPKWVRQFTQNDIWAVG--VP-NPNPATGQLVD 347
Query: 266 ADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDIIWFKLAGPGGREGGGVW-- 323
D G+AP + + + VV A QK G D +G+++ L P + GG
Sbjct: 348 MDLGDAPKIYRLPGG---QKVVGAGQKDGRYHVVDAQTGEVVRTTLQLPPRNDLGGFQTG 404
Query: 324 GAATDG 329
GA DG
Sbjct: 405 GAVADG 410
>gi|254373467|ref|ZP_04988955.1| conserved hypothetical protein [Francisella tularensis subsp.
novicida GA99-3549]
gi|151571193|gb|EDN36847.1| conserved hypothetical protein [Francisella novicida GA99-3549]
Length = 456
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 84/231 (36%), Gaps = 60/231 (25%)
Query: 44 PAVANGVVYFPSWNGYLYAVNAFNGALIWEQ----NLSKLTGLSGTGIVVNVTVAVVVAV 99
PA AN V+ P+ NG YA+ NG +IW+ NLS ++ + A+
Sbjct: 63 PAYANDTVFVPNQNGMAYALAITNGKIIWKNDTGTNLSVQPNTIANAVIFGSIKGTLTAI 122
Query: 100 SRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDV 159
+G+ +W T SQ T +Y + Y+ T GS++ D
Sbjct: 123 DDKDGQTLWRTDAPSSIFSQPT----IYDNSIYL--------------QTHDGSVSAFDA 164
Query: 160 RNGRIIWQT------YMLPDN------------GGKRGGYSG--------------AAVW 187
RNG W LP N G G G A
Sbjct: 165 RNGSKEWSVANNIPEITLPSNSSPIILNNTVMIGNAFGAVLGFTIKSGDRTINIPIAISH 224
Query: 188 GSSPAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAK 238
GSSPA K + T P D + Y +IVALD DSG++ WAK
Sbjct: 225 GSSPA------DKMVDITANPMLYDHYLIFAAYQGAIVALDKDSGKMLWAK 269
>gi|307726503|ref|YP_003909716.1| PQQ-dependent dehydrogenase, methanol/ethanol family [Burkholderia
sp. CCGE1003]
gi|307587028|gb|ADN60425.1| PQQ-dependent dehydrogenase, methanol/ethanol family [Burkholderia
sp. CCGE1003]
Length = 575
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 65/319 (20%), Positives = 119/319 (37%), Gaps = 54/319 (16%)
Query: 20 INPVTVRNLRLRWSFYAGKDI----SATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQN 75
I+ V+ L+ WS+ D+ ATP V ++ + +YA +A G +W+
Sbjct: 70 IDASNVKQLKQVWSYKFPADLQQGFEATPIVNGRYLFVTTPKDNVYAFDAATGKQLWKFE 129
Query: 76 ---------------LSKLTGLSGTGIVVNVTVAVVVAVSRSNGELVW-STQIDPRPRSQ 119
+++ L G + V + VV++ G L W + +P
Sbjct: 130 PKLGAESFKTACCDVINRGVALYGKNVYVAMLNGEVVSLDAQTGALAWRKSMFEPGLGYA 189
Query: 120 ITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNGGKRG 179
+++ GA VG + E RG +A L+ NG ++W+ + +P K G
Sbjct: 190 FSLAPLALDGALVVGSAGGEYGA--------RGFIAALNPDNGNVLWKRFTVPAANEKGG 241
Query: 180 G--------YSGAAVWGSSPAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDS 231
+ GA W + + P D ++Y++S++ALD +
Sbjct: 242 NTWPDGMQEHGGAPAWLTGTYDAASKTLYWGVGNPGPWLADLRPGDNLYSDSLLALDPKT 301
Query: 232 GRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQ 291
G + W D + D D P+L I + D ++
Sbjct: 302 GDLKWHYQYTKNDTW------------------DYDGVNTPVLANIKYEDKDYDAIIHAD 343
Query: 292 KSGFAWAFDRDSGDIIWFK 310
++G+ A DR +G +I+ K
Sbjct: 344 RNGYFHAIDRGTGKLIYAK 362
>gi|187931100|ref|YP_001891084.1| outer membrane assembly lipoprotein YfgL [Francisella tularensis
subsp. mediasiatica FSC147]
gi|187712009|gb|ACD30306.1| outer membrane assembly lipoprotein YfgL [Francisella tularensis
subsp. mediasiatica FSC147]
Length = 456
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 84/231 (36%), Gaps = 60/231 (25%)
Query: 44 PAVANGVVYFPSWNGYLYAVNAFNGALIWEQ----NLSKLTGLSGTGIVVNVTVAVVVAV 99
PA AN V+ P+ NG YA+ NG +IW+ NLS ++ + A+
Sbjct: 63 PAYANDTVFVPNQNGMAYALAITNGKIIWKNDTGTNLSVQPNTIANAVIFGSIKGTLTAI 122
Query: 100 SRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDV 159
+G+ +W T SQ T +Y + Y+ T GS++ D
Sbjct: 123 DDKDGQTLWRTDAPSSIFSQPT----IYDNSIYL--------------QTHDGSVSAFDA 164
Query: 160 RNGRIIWQT------YMLPDN------------GGKRGGYSG--------------AAVW 187
RNG W LP N G G G A
Sbjct: 165 RNGSKEWSVANNIPEITLPSNSSPIILNNTVMIGNAFGAVLGFTIKSGDRTINIPIAISH 224
Query: 188 GSSPAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAK 238
GSSPA K + T P D + Y +IVALD DSG++ WAK
Sbjct: 225 GSSPA------DKMVDITANPMLYDHYLIFAAYQGAIVALDKDSGKMLWAK 269
>gi|76803006|ref|YP_331101.1| cell surface protein/ lipoprotein [Natronomonas pharaonis DSM 2160]
gi|76558871|emb|CAI50466.1| PQQ repeat protein [Natronomonas pharaonis DSM 2160]
Length = 397
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 53/104 (50%), Gaps = 4/104 (3%)
Query: 31 RWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTGLS---GTGI 87
RW+F S +PAVA+G VY W+G LYA++A G W+ +L S G
Sbjct: 240 RWTFRTEGAGSVSPAVADGTVYVGCWDGRLYAIDAAEGEERWQLSLDGRVQASPAVADGT 299
Query: 88 VVNVTVAVVVAVSRSNGELVWSTQIDPRPRSQITMSGS-VYMGA 130
V + V + ++GE +W T + R S T++G VY+G+
Sbjct: 300 VYAASTGGDVVAATTDGEALWRTNTNSRIESAPTVAGGVVYLGS 343
Score = 41.6 bits (96), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 58/143 (40%), Gaps = 26/143 (18%)
Query: 31 RWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTGLSGTGIVVN 90
W F G I + PAV +G VY S + +YAV+A +G W + ++G VV
Sbjct: 160 EWVFETGDGIDSAPAVVDGTVYVGSGDRTVYAVDADSGQEQW--HFDADDSVTGAPAVVG 217
Query: 91 VTVAV------VVAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPA 144
TV V V A++ +G W+ R ++S +V G YVG
Sbjct: 218 DTVYVGSRDSNVYAIAADDGTERWTF----RTEGAGSVSPAVADGTVYVGC--------- 264
Query: 145 DQCCTFRGSLAKLDVRNGRIIWQ 167
+ G L +D G WQ
Sbjct: 265 -----WDGRLYAIDAAEGEERWQ 282
>gi|134301372|ref|YP_001121340.1| lipoprotein [Francisella tularensis subsp. tularensis WY96-3418]
gi|421751105|ref|ZP_16188163.1| lipoprotein [Francisella tularensis subsp. tularensis AS_713]
gi|421752960|ref|ZP_16189969.1| lipoprotein [Francisella tularensis subsp. tularensis 831]
gi|421756692|ref|ZP_16193594.1| lipoprotein [Francisella tularensis subsp. tularensis 80700103]
gi|421758562|ref|ZP_16195407.1| lipoprotein [Francisella tularensis subsp. tularensis 70102010]
gi|424673828|ref|ZP_18110759.1| lipoprotein [Francisella tularensis subsp. tularensis 70001275]
gi|134049149|gb|ABO46220.1| hypothetical lipoprotein [Francisella tularensis subsp. tularensis
WY96-3418]
gi|409088773|gb|EKM88832.1| lipoprotein [Francisella tularensis subsp. tularensis 831]
gi|409089091|gb|EKM89145.1| lipoprotein [Francisella tularensis subsp. tularensis AS_713]
gi|409092119|gb|EKM92099.1| lipoprotein [Francisella tularensis subsp. tularensis 70102010]
gi|409093353|gb|EKM93300.1| lipoprotein [Francisella tularensis subsp. tularensis 80700103]
gi|417435603|gb|EKT90493.1| lipoprotein [Francisella tularensis subsp. tularensis 70001275]
Length = 456
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 84/231 (36%), Gaps = 60/231 (25%)
Query: 44 PAVANGVVYFPSWNGYLYAVNAFNGALIWEQ----NLSKLTGLSGTGIVVNVTVAVVVAV 99
PA AN V+ P+ NG YA+ NG +IW+ NLS ++ + A+
Sbjct: 63 PAYANDTVFVPNQNGMAYALAITNGKIIWKNDTGTNLSVQPNTIANAVIFGSIKGTLTAI 122
Query: 100 SRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDV 159
+G+ +W T SQ T +Y + Y+ T GS++ D
Sbjct: 123 DDKDGQTLWRTDAPSSIFSQPT----IYDNSIYL--------------QTHDGSVSAFDA 164
Query: 160 RNGRIIWQT------YMLPDN------------GGKRGGYSG--------------AAVW 187
RNG W LP N G G G A
Sbjct: 165 RNGSKEWSVANNIPEITLPSNSSPIILNNTVMIGNAFGAVLGFTIKSGDRTINIPIAISH 224
Query: 188 GSSPAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAK 238
GSSPA K + T P D + Y +IVALD DSG++ WAK
Sbjct: 225 GSSPA------DKMVDITANPMLYDHYLIFAAYQGAIVALDKDSGKMLWAK 269
>gi|254374928|ref|ZP_04990409.1| conserved hypothetical protein [Francisella novicida GA99-3548]
gi|151572647|gb|EDN38301.1| conserved hypothetical protein [Francisella novicida GA99-3548]
Length = 456
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 84/231 (36%), Gaps = 60/231 (25%)
Query: 44 PAVANGVVYFPSWNGYLYAVNAFNGALIWEQ----NLSKLTGLSGTGIVVNVTVAVVVAV 99
PA AN V+ P+ NG YA+ NG +IW+ NLS ++ + A+
Sbjct: 63 PAYANDTVFVPNQNGMAYALAITNGKIIWKNDTGTNLSVQPNTIANAVIFGSIKGTLTAI 122
Query: 100 SRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDV 159
+G+ +W T SQ T +Y + Y+ T GS++ D
Sbjct: 123 DDKDGQTLWRTDAPSSIFSQPT----IYDNSIYL--------------QTHDGSVSAFDA 164
Query: 160 RNGRIIWQT------YMLPDN------------GGKRGGYSG--------------AAVW 187
RNG W LP N G G G A
Sbjct: 165 RNGSKEWSVANNIPEITLPSNSSPIILNNTVMIGNAFGAVLGFTIKSGDRTINIPIAISH 224
Query: 188 GSSPAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAK 238
GSSPA K + T P D + Y +IVALD DSG++ WAK
Sbjct: 225 GSSPA------DKMVDITANPMLYDHYLIFAAYQGAIVALDKDSGKMLWAK 269
>gi|253999021|ref|YP_003051084.1| Pyrrolo-quinoline quinone [Methylovorus glucosetrophus SIP3-4]
gi|253985700|gb|ACT50557.1| Pyrrolo-quinoline quinone [Methylovorus glucosetrophus SIP3-4]
Length = 601
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 85/400 (21%), Positives = 141/400 (35%), Gaps = 119/400 (29%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAG--KDISATPAVANGVVYFPSWNG 58
W + G D +N+R+A +IN V L W F G TP VANGV+Y
Sbjct: 44 WPSFGRDYSNQRFA-PSTIINRQNVNQLAEAWRFKTGVVGSFQTTPIVANGVMYLSLPYN 102
Query: 59 YLYAVNAFNGALIWEQNLSK------LTGLSGTGIVV-------NVTVAVVVAVSRSNGE 105
++ A++A G +W + G + G+ V A ++A+ G+
Sbjct: 103 HVVALDARTGKELWRYEHQRRPEWKMCCGPANRGVAVAYGKVFMGTVDARLIALDARTGK 162
Query: 106 LVWSTQI----------------DPRPRSQ--------ITMSGSVYMGAFYVGLSSL--- 138
LVW DP R++ I M+ VY G VG++ +
Sbjct: 163 LVWDIDAVDQAVETEGQASLDSKDPNSRAKVSGGTGIGIAMAPIVYKGKVLVGITGVGYG 222
Query: 139 ------EEALPADQCCTFRGS------LAKLDVRNGRIIWQTYMLP-------------- 172
E P G +A DV +G+ +WQ +
Sbjct: 223 LHIDNPREDAPLGAVIGLAGRYGRPGFIAAFDVDSGKRVWQFDTISPEQWLGQFTVKTAD 282
Query: 173 ------DNGGKRGG---------YSGAAVWGSSPAIDVI---------RRQKQNNQTTKP 208
D ++ Y G + W S+PA+D Q N +P
Sbjct: 283 GITLDRDVATEKAQARQHPDAWRYGGGSAW-STPALDTDLGLLYFGTGNPSPQMNDIERP 341
Query: 209 THPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADF 268
++Y S+VALDI++G++ W +D++ + D
Sbjct: 342 -------GDNLYTVSLVALDIETGKLRWHYQQVPHDLWGY------------------DL 376
Query: 269 GEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDIIW 308
P+L +G+ V K+G+ +A DR +G +++
Sbjct: 377 ASPPVLFDWQHDGKTIPAVGQASKTGWFYAHDRATGRLLF 416
>gi|118594242|ref|ZP_01551589.1| Pyrrolo-quinoline quinone [Methylophilales bacterium HTCC2181]
gi|118440020|gb|EAV46647.1| Pyrrolo-quinoline quinone [Methylophilales bacterium HTCC2181]
Length = 581
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 78/398 (19%), Positives = 143/398 (35%), Gaps = 117/398 (29%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAG--KDISATPAVANGVVYFPSWNG 58
W ++G D N+RY+ + IN V+ L+L W + G ATP V +G++Y
Sbjct: 26 WSSYGQDHTNQRYSRLD-QINNKNVQGLKLAWQYQTGIKATFQATPIVQDGIMYISLPYN 84
Query: 59 YLYAVNAFNGALIWEQN-------------LSKLTGLSGTGIVVNVTVAVVVAVSRSNGE 105
++ A+NA G +IW ++ + G + + A ++++ G
Sbjct: 85 HVLAMNAKTGKVIWRYEHDRNRDWKMCCGPTNRGVAVHGEQLFMGTVDARLISLDIKTGH 144
Query: 106 LVWSTQI----------------DPRPRSQ--------ITMSGSVYMGAFYVGLSSL--- 138
+W + DP + I+M+ VY VG++ +
Sbjct: 145 KLWDINVVENIVGTESISALNPSDPNREKKISGGTGVGISMAPVVYENKVIVGITGVGYG 204
Query: 139 ------EEALPADQCCTFRGS------LAKLDVRNGRIIWQTYMLPDNGGK--------- 177
E+ P G LA D+ +G+ +WQ +P G +
Sbjct: 205 LHVEGREKDAPLGAVVGVAGRFGRPGFLAAYDIYSGKQVWQFDTIPAEGWEGDLSNYTKD 264
Query: 178 --------------------RGGYSGAAVWGSSPAIDVIRRQKQNNQTT-------KPTH 210
Y G + W ++PAID ++ T P
Sbjct: 265 GEVLNRDLLTEKESLLEYPDAAKYGGGSAW-TTPAID------KDTHTLFFGTGNPSPQM 317
Query: 211 PDQCISSD-IYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFG 269
DQ D +Y S+VALD ++G++ W +DI+ + D
Sbjct: 318 SDQSRPGDNLYTVSLVALDANTGKLKWYYQQVPHDIWGY------------------DVA 359
Query: 270 EAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
P++ G+ V K+G+ + +R++G+++
Sbjct: 360 SPPVIFHTIHKGKIIPAVGQAGKTGWFYIHNRNTGELL 397
>gi|365901003|ref|ZP_09438862.1| putative Quinoprotein ethanol dehydrogenase [Bradyrhizobium sp. STM
3843]
gi|365418352|emb|CCE11404.1| putative Quinoprotein ethanol dehydrogenase [Bradyrhizobium sp. STM
3843]
Length = 554
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 80/339 (23%), Positives = 137/339 (40%), Gaps = 68/339 (20%)
Query: 2 LNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAGKDIS--ATPAVANGVVYFPSWNGY 59
LN+G N +R++ IN + +NL W++ D S + P V GV+Y + N
Sbjct: 37 LNYGMGYNLQRFS-PLTQINKDSAKNLVPVWNYSFADDRSEESQPLVYQGVIYVTTHNAT 95
Query: 60 LYAVNAFNGALIWEQNLSKLTGLSGT--------------GIVVNVTV-AVVVAVSRSNG 104
+ A++A G IW+ + T G V T+ A V+A+ G
Sbjct: 96 M-AIDAKTGKQIWKSKIEYPTETPRIVCCGIINRGAALFDGKVFRTTLDANVIALDAKTG 154
Query: 105 ELVWSTQI-DPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGR 163
+ +W + D + +T++ V G G+S E RG + D G+
Sbjct: 155 KELWRQKAADIKEGYSMTVAPLVADGVVLTGISGAEFGT--------RGFIDGWDPATGK 206
Query: 164 IIWQTYMLP---DNGG--------KRGGYSGAAVWGSSPAIDVIRRQKQN----NQTTKP 208
+W+T+ +P + GG K GG S P ++ + N N +P
Sbjct: 207 HLWRTHTVPSPDEPGGDTWKGDTWKLGGGSTWITGSYDPELNTVYWGIGNPGPFNAAVRP 266
Query: 209 THPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADF 268
++Y S++ALD +G+I W + F+ PNNP D D
Sbjct: 267 -------GDNLYTCSVLALDPKTGKIKWH--------YQFS---PNNP-------FDYDS 301
Query: 269 GEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
+L I+ G+ V++ ++GF + DR +G ++
Sbjct: 302 VAEMVLADINVEGKPTKVLMDANRNGFFYVLDRTNGKLL 340
>gi|126462004|ref|YP_001043118.1| Pyrrolo-quinoline quinone [Rhodobacter sphaeroides ATCC 17029]
gi|126103668|gb|ABN76346.1| Pyrrolo-quinoline quinone [Rhodobacter sphaeroides ATCC 17029]
Length = 600
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 81/369 (21%), Positives = 149/369 (40%), Gaps = 91/369 (24%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRN---LRLRWSFYAG--KDISATPAVANGVVY--- 52
W GD N RY+ +N +T N L++ W+F G + +P V +G++Y
Sbjct: 35 WAIQTGDYANTRYSE----LNQITRENVGKLQVAWTFSTGVLRGHEGSPLVVDGIMYVHT 90
Query: 53 -FPSWNGYLYAVN-AFNGALIW----EQN-----------LSKLTGLSGTGIVVNVTVAV 95
FP+ +YA++ A +G ++W +QN +++ + I ++
Sbjct: 91 PFPN---NVYALDLANDGKILWRYEPQQNPDVIGVMCCDTVNRGVAYADGMIFLHQADTT 147
Query: 96 VVAVSRSNGELVWSTQI-DPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSL 154
VVA+ +GE+ W+ Q DP T + VG+S E + RG +
Sbjct: 148 VVALDAKSGEVKWTVQNGDPAKGETNTATVLPVKDKLLVGISGGEFGV--------RGHV 199
Query: 155 AKLDVRNGRIIWQTY-------ML--PDN-----------------GGKRGGYSGAAVWG 188
D++ G+ +W+ Y ML P+N G + G WG
Sbjct: 200 TAYDMKTGKQVWRAYSTGPDAEMLVDPENTMVLGKPVGADSSIKSWEGDQWQIGGGTTWG 259
Query: 189 ---SSPAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDI 245
P ++++ N T P+ Q + ++ +I+A D D+G W +
Sbjct: 260 WYSYDPDLNLVYYGTGNPSTWNPS---QRPGDNKWSMTIMARDADTGMAKW--------M 308
Query: 246 FYFTCLVPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGD 305
+ T P D D +L+ +G+ R ++V + ++GF + DR++G+
Sbjct: 309 YQKT----------PHDEWDYDGVNENILVDQEIDGQMRKLLVNLDRNGFGYTLDRETGE 358
Query: 306 IIWFKLAGP 314
++ K P
Sbjct: 359 LLVAKKYDP 367
>gi|208779471|ref|ZP_03246816.1| conserved hypothetical lipoprotein [Francisella novicida FTG]
gi|208744432|gb|EDZ90731.1| conserved hypothetical lipoprotein [Francisella novicida FTG]
Length = 456
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 84/231 (36%), Gaps = 60/231 (25%)
Query: 44 PAVANGVVYFPSWNGYLYAVNAFNGALIWEQ----NLSKLTGLSGTGIVVNVTVAVVVAV 99
PA AN V+ P+ NG YA+ NG +IW+ NLS ++ + A+
Sbjct: 63 PAYANDTVFVPNQNGMAYALAITNGKIIWKNDTGTNLSVQPNTIANAVIFGSIKGTLTAI 122
Query: 100 SRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDV 159
+G+ +W T SQ T +Y + Y+ T GS++ D
Sbjct: 123 DDKDGQTLWRTDAPSSIFSQPT----IYDNSIYL--------------QTHDGSVSAFDA 164
Query: 160 RNGRIIWQT------YMLPDN------------GGKRGGYSG--------------AAVW 187
RNG W LP N G G G A
Sbjct: 165 RNGSKEWSVANNIPEITLPSNSSPIILNNTVMIGNAFGAVLGFTIKSGDRTINIPIAISH 224
Query: 188 GSSPAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAK 238
GSSPA K + T P D + Y +IVALD DSG++ WAK
Sbjct: 225 GSSPA------DKMVDITANPMLYDHYLIFAAYQGAIVALDKDSGKMLWAK 269
>gi|56707335|ref|YP_169231.1| lipoprotein [Francisella tularensis subsp. tularensis SCHU S4]
gi|110669805|ref|YP_666362.1| lipoprotein [Francisella tularensis subsp. tularensis FSC198]
gi|254370012|ref|ZP_04986019.1| conserved hypothetical protein [Francisella tularensis subsp.
tularensis FSC033]
gi|254874170|ref|ZP_05246880.1| conserved hypothetical protein [Francisella tularensis subsp.
tularensis MA00-2987]
gi|379716533|ref|YP_005304869.1| PQQ (Pyrrolo quinoline) WD40-like repeat enzyme repeat domain
protein [Francisella tularensis subsp. tularensis
TIGB03]
gi|379725216|ref|YP_005317402.1| PQQ (Pyrrolo quinoline) WD40-like repeat enzyme repeat domain
protein [Francisella tularensis subsp. tularensis
TI0902]
gi|385793925|ref|YP_005830331.1| hypothetical protein NE061598_00935 [Francisella tularensis subsp.
tularensis NE061598]
gi|421754779|ref|ZP_16191744.1| hypothetical protein B343_00939 [Francisella tularensis subsp.
tularensis 80700075]
gi|81598024|sp|Q5NIB1.1|BAMB_FRATT RecName: Full=Outer membrane protein assembly factor BamB; Flags:
Precursor
gi|56603827|emb|CAG44798.1| conserved hypothetical lipoprotein [Francisella tularensis subsp.
tularensis SCHU S4]
gi|110320138|emb|CAL08181.1| conserved hypothetical lipoprotein [Francisella tularensis subsp.
tularensis FSC198]
gi|151568257|gb|EDN33911.1| conserved hypothetical protein [Francisella tularensis subsp.
tularensis FSC033]
gi|254840169|gb|EET18605.1| conserved hypothetical protein [Francisella tularensis subsp.
tularensis MA00-2987]
gi|282158460|gb|ADA77851.1| conserved hypothetical lipoprotein [Francisella tularensis subsp.
tularensis NE061598]
gi|377826665|gb|AFB79913.1| PQQ (Pyrrolo quinoline) WD40-like repeat enzyme repeat domain
protein [Francisella tularensis subsp. tularensis
TI0902]
gi|377828210|gb|AFB78289.1| PQQ (Pyrrolo quinoline) WD40-like repeat enzyme repeat domain
protein [Francisella tularensis subsp. tularensis
TIGB03]
gi|409090446|gb|EKM90464.1| hypothetical protein B343_00939 [Francisella tularensis subsp.
tularensis 80700075]
Length = 456
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 84/231 (36%), Gaps = 60/231 (25%)
Query: 44 PAVANGVVYFPSWNGYLYAVNAFNGALIWEQ----NLSKLTGLSGTGIVVNVTVAVVVAV 99
PA AN V+ P+ NG YA+ NG +IW+ NLS ++ + A+
Sbjct: 63 PAYANDTVFVPNQNGMAYALAITNGKIIWKNDTGTNLSVQPNTIANAVIFGSIKGTLTAI 122
Query: 100 SRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDV 159
+G+ +W T SQ T +Y + Y+ T GS++ D
Sbjct: 123 DDKDGQTLWRTDAPSSIFSQPT----IYDNSIYL--------------QTHDGSVSAFDA 164
Query: 160 RNGRIIWQT------YMLPDN------------GGKRGGYSG--------------AAVW 187
RNG W LP N G G G A
Sbjct: 165 RNGSKEWSVANNIPEITLPSNSSPIILNNTVMIGNAFGAVLGFTIKSGDRTINIPIAISH 224
Query: 188 GSSPAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAK 238
GSSPA K + T P D + Y +IVALD DSG++ WAK
Sbjct: 225 GSSPA------DKMVDITANPMLYDHYLIFAAYQGAIVALDKDSGKMLWAK 269
>gi|385793518|ref|YP_005826494.1| hypothetical protein [Francisella cf. novicida Fx1]
gi|332678843|gb|AEE87972.1| PQQ (Pyrrolo quinoline) WD40-like repeat, enzyme repeat domain
protein [Francisella cf. novicida Fx1]
Length = 456
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 84/231 (36%), Gaps = 60/231 (25%)
Query: 44 PAVANGVVYFPSWNGYLYAVNAFNGALIWEQ----NLSKLTGLSGTGIVVNVTVAVVVAV 99
PA AN V+ P+ NG YA+ NG +IW+ NLS ++ + A+
Sbjct: 63 PAYANDTVFVPNQNGMAYALAITNGKIIWKNDTGTNLSVQPNTIANAVIFGSIKGTLTAI 122
Query: 100 SRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDV 159
+G+ +W T SQ T +Y + Y+ T GS++ D
Sbjct: 123 DDKDGQTLWRTDAPSSIFSQPT----IYDNSIYL--------------QTHDGSVSAFDA 164
Query: 160 RNGRIIWQT------YMLPDN------------GGKRGGYSG--------------AAVW 187
RNG W LP N G G G A
Sbjct: 165 RNGSKEWSVANNIPEITLPSNSSPIILNNTVMIGNAFGAVLGFTIKSGDRTINIPIAISH 224
Query: 188 GSSPAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAK 238
GSSPA K + T P D + Y +IVALD DSG++ WAK
Sbjct: 225 GSSPA------DKMVDITANPMLYDHYLIFAAYQGAIVALDKDSGKMLWAK 269
>gi|262402116|ref|ZP_06078677.1| quino(hemo)protein alcohol dehydrogenase PQQ-dependent [Vibrio sp.
RC586]
gi|262350898|gb|EEZ00031.1| quino(hemo)protein alcohol dehydrogenase PQQ-dependent [Vibrio sp.
RC586]
Length = 442
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 73/337 (21%), Positives = 124/337 (36%), Gaps = 80/337 (23%)
Query: 19 LINPVTVRNLRLRWSFYAG----KDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQ 74
L+N ++ LR W+F G + + P + +GV+Y +YA+NA G IW+
Sbjct: 59 LLNTENIQELRPVWAFSLGGEKQRGQESQPMIRDGVMYITGSYSRVYAINAKTGDEIWQY 118
Query: 75 NLSKLTGLSGTGIVVNVTVAV-------------VVAVSRSNGELVWSTQI-DPRPRSQI 120
+ G+ VVN VA+ +VA+ G + W + D R I
Sbjct: 119 DARLPDGIVPCCDVVNRGVAMYDDLVIFGTLDAKLVALDAKTGNVRWKKTVEDYRAGYSI 178
Query: 121 TMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQT--------YMLP 172
T + V G G+S E + G + D + G ++W+ Y+
Sbjct: 179 TAAPIVVKGKVITGVSGGEFGI--------VGKVRAYDAKTGELVWERPTVEGHMGYVWK 230
Query: 173 D--------NGGKRGGYSGAAVWGS-----------SPAIDVIRRQKQNNQTTKPTHPDQ 213
D +GGK G A +W + P D++ N P +
Sbjct: 231 DGKRVDNGISGGKAGTTWPADLWQTGGAAPWLGGTYDPETDLLYFGTGN---PAPWNSHM 287
Query: 214 CISSDIYANSIVALDIDSGRIAW---AKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGE 270
+++++S +A+D D G+I W P G+D L+P
Sbjct: 288 RPGDNLFSSSRLAIDPDDGKIVWHFQTTPHDGWDFDGVNELIP----------------- 330
Query: 271 APMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
NG+ + ++GF + +R +GD I
Sbjct: 331 ----FDYQQNGKTVQAAASADRNGFFYVLNRTNGDFI 363
>gi|334140680|ref|YP_004533882.1| pyrrolo-quinoline quinone [Novosphingobium sp. PP1Y]
gi|333938706|emb|CCA92064.1| pyrrolo-quinoline quinone [Novosphingobium sp. PP1Y]
Length = 732
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 79/347 (22%), Positives = 130/347 (37%), Gaps = 71/347 (20%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAGKD--ISATPAVANGVVYFPSWNG 58
W + GD + Y+ I+ V L L WS+ G + ATP V +G++Y G
Sbjct: 34 WPSPKGDSDASHYS-ALTQIDKGNVSRLGLAWSYDLGTNRVQEATPVVIDGMMYTSGNLG 92
Query: 59 YLYAVNAFNGALIW--EQNLSKLTGLSGTGIVVNVTVAV-------------VVAVSRSN 103
+YA++A +G W E + + N VAV + A+
Sbjct: 93 RVYALDAASGKPKWTFEPEVDMQVNRTACCDQANRGVAVADGKVFVGTLDGRLYALDAKT 152
Query: 104 GELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGR 163
GE+ W+ T++G+ + V + + A RG + D++ GR
Sbjct: 153 GEVAWNVDTVADHTRGYTITGAPEVAGDLVVIGNAGAEFDA------RGYVTAYDLKTGR 206
Query: 164 IIWQTYMLP----------------------DNGGKRGGYSGAAVWGS---SPAIDVIRR 198
+W+ + +P D+ GG G VW + P D +
Sbjct: 207 QVWRFFTVPHDPKLGPQENPELEAAVRTWAADSRWDIGG--GGTVWDAINYDPRFDTVII 264
Query: 199 QKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDC 258
N T S++Y +S+VALD +GR+ W D + +T
Sbjct: 265 GVGNGGPYNITRRSPGGGSNLYLSSLVALDRKTGRVKWHYQETPGDAWDYTA-------- 316
Query: 259 PPGPNLDADFGEAPMLLT-ISTNGRFRDVVVAVQKSGFAWAFDRDSG 304
PML T + NG+ R V++ K+GF + DR++G
Sbjct: 317 -----------TQPMLFTDLEVNGKMRPVLIHSPKNGFLFVLDRETG 352
>gi|124266098|ref|YP_001020102.1| alcohol dehydrogenase [Methylibium petroleiphilum PM1]
gi|124258873|gb|ABM93867.1| alcohol dehydrogenase [Methylibium petroleiphilum PM1]
Length = 711
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 83/354 (23%), Positives = 132/354 (37%), Gaps = 77/354 (21%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAGKDIS--ATPAVANGVVYFPSWNG 58
WL +G + + +RY+ ++ V L L WS +D S +TP + +GV+YF
Sbjct: 51 WLAYGRNYSEQRYS-PLAQVHAGNVGRLGLAWSMALPEDRSLLSTPLIVDGVMYFTGSWS 109
Query: 59 YLYAVNAFNGALIWEQNLSKLTGLSGT-----------------GIVVNVTVAVVVAVSR 101
AV+A G L+WE + + G +V+ ++ +
Sbjct: 110 KTRAVDAATGKLLWEYDPESIKHAGGERLRAMWDSSRGLAYWKGKLVIATIDGRLIGLDA 169
Query: 102 SNGELVWSTQ-IDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVR 160
G+ +WSTQ DP+ I+ + VG E RG ++ V
Sbjct: 170 KTGQKLWSTQTFDPKRPLYISGHPKAFRDLVIVGNGGSE-------FGAGRGFVSAYHVD 222
Query: 161 NGRIIWQTYMLPDNGG--------------------KRGGYSGAAVWGS---SPAIDVIR 197
+G++ W+ Y++P N K GG G VW P D I
Sbjct: 223 SGKLAWKFYVVPGNPADGFEDEAQAMAAKTWTGEWWKHGG--GGQVWNGLTYDPEYDQIL 280
Query: 198 RQKQNNQ--TTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNN 255
N K PD +++ SIVALD +G+ W Y T
Sbjct: 281 IGTGNGGPWNRKVRSPDG--GDNLFLCSIVALDARTGKYKW---------HYQTV----- 324
Query: 256 PDCPPGPNLDADFGEAPML--LTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
PG D + +L L + G R V++ K+GF + DR +G ++
Sbjct: 325 ----PGETWDYNSSMDMVLADLKLRPGGGPRKVLLHAPKNGFFYVIDRKNGKLL 374
>gi|374998607|ref|YP_004974106.1| Methanol PQQ-dependent dehydrogenase, large (alpha) subunit
[Azospirillum lipoferum 4B]
gi|357426032|emb|CBS88931.1| Methanol PQQ-dependent dehydrogenase, large (alpha) subunit
[Azospirillum lipoferum 4B]
Length = 608
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 80/371 (21%), Positives = 146/371 (39%), Gaps = 87/371 (23%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAG--KDISATPAVANGVVY----FP 54
W G+ +RY+ + + V+NLR W F G + P V +Y FP
Sbjct: 38 WAMQLGNYAGQRYSTLDQITRD-NVKNLRPVWQFSTGVLRGHEGGPVVIGDTMYISTPFP 96
Query: 55 SWNGYLYAVNAF-NGALIWE---------------QNLSKLTGLSGTGIVVNVTVAVVVA 98
+ +YA++ NG + W+ +++ ++G + + +VA
Sbjct: 97 N---IVYALDLNDNGRIKWKYEPKQDSAVIPVMCCDTVTRGVAVAGNKVFLGQADNTLVA 153
Query: 99 VSRSNGELVWSTQI-DPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKL 157
+ +G+++WS + D +T + V YVG+S E + RG L
Sbjct: 154 LDAQSGKVLWSVKNGDASKGETLTAAPMVVKDKVYVGISGGEFGV--------RGHLTAY 205
Query: 158 DVRNGRIIWQTY----------------ML------PDNGGK-----RGGYSGAAVWG-- 188
D+ +G+++W+ Y M+ PD G K + G WG
Sbjct: 206 DINSGKMVWRAYSTGPDKDVMIDPQKTLMMGKPIGEPDLGIKTWPADQWKIGGGTTWGWY 265
Query: 189 -SSPAIDVIRRQKQN----NQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGY 243
P +++I N N + + D+ S + ++ +I A D D+G+ W
Sbjct: 266 TYDPDLNLIYYGTGNPGTWNPAQRAVNNDRAKSDNKWSMTIFARDADTGQAKW------- 318
Query: 244 DIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDS 303
+F T P D D +L I+ G+ R V+V + ++GF + DR++
Sbjct: 319 -VFQKT----------PFDEWDYDGVNENILADINIGGQQRKVLVNMDRNGFGYTLDRNT 367
Query: 304 GDIIWFKLAGP 314
G+++ K P
Sbjct: 368 GELLVAKKFDP 378
>gi|335043277|ref|ZP_08536304.1| glucose dehydrogenase [Methylophaga aminisulfidivorans MP]
gi|333789891|gb|EGL55773.1| glucose dehydrogenase [Methylophaga aminisulfidivorans MP]
Length = 583
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 84/397 (21%), Positives = 149/397 (37%), Gaps = 115/397 (28%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAG--KDISATPAVANGVVYFPSWNG 58
W GG+ ++R++ IN T++NL+ W + +G ATP V V+Y
Sbjct: 26 WPVFGGNQWHQRHS-PLTQINQDTIQNLQPAWQYQSGIKATFQATPIVKGKVMYLSLPFN 84
Query: 59 YLYAVNAFNGALIWEQNLSKLT------GLSGTGIVVN---VTVAVV----VAVSRSNGE 105
+ A++A G IW + ++T G + G+ V+ V + V +A+ R G+
Sbjct: 85 DVVALDAKTGQQIWRYHHERITSREMCCGPANRGVAVDDYHVYMGTVDGRLIALDRQTGK 144
Query: 106 LVWST----------------------QIDPRPRSQITMSGSVYMGAFYVGLSSLEEALP 143
L W ++ + + I M+ VY G +G++ + L
Sbjct: 145 LAWDRDVTLGESGIQEDIATLGDEAKGKVSGKSGAGINMAPMVYKGQVIIGITGVGYGLH 204
Query: 144 ADQCCT---------------FRGSLAKLDVRNGRIIWQTYMLPDNGGK-------RGG- 180
D RG LA D G+ +WQ +P++ + GG
Sbjct: 205 IDSPDVNAPLGAVVGIAGEYGRRGFLAAYDAETGKPLWQFDTIPEHNWEGQFVTTTPGGE 264
Query: 181 ---------------------YSGAAVWGSSPAIDVIRRQKQNNQTT-------KPTHPD 212
Y G + W S+PAID ++ T P D
Sbjct: 265 ALPRDIEKEKAVLAEYPDAWRYGGGSAW-STPAID------EDTDTLFFGTGNPSPQMED 317
Query: 213 QCISSD-IYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEA 271
D +Y +SIVALD SG++ W +D++ + P
Sbjct: 318 SSRPGDNLYTSSIVALDAMSGKVKWYFQQVPHDLWGYDVASP------------------ 359
Query: 272 PMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDIIW 308
P L T+ +G+ + + K+G+ + +R++G +++
Sbjct: 360 PALFTVDIDGKKINALGQAGKTGWFYVLNRNTGKLLF 396
>gi|254876392|ref|ZP_05249102.1| conserved hypothetical protein [Francisella philomiragia subsp.
philomiragia ATCC 25015]
gi|254842413|gb|EET20827.1| conserved hypothetical protein [Francisella philomiragia subsp.
philomiragia ATCC 25015]
Length = 519
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 93/259 (35%), Gaps = 66/259 (25%)
Query: 22 PVTVRNLRLRWSFYAGKD------ISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQN 75
P ++++WS G + +PA AN +V+ P+ NG Y + NG +IW+ +
Sbjct: 35 PPKEAKVKVKWSRSTGNGNGGLPIYNVSPAYANDMVFVPNQNGMAYGLAIANGKIIWKHD 94
Query: 76 ----LSKLTGLSGTGIVVNVTVAVVVAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAF 131
LS ++ + AV + +G+++W T SQ T +Y
Sbjct: 95 TGTILSSQPSTIANAVIFGSIKGTLTAVDQKDGQILWRTDAPSSIFSQPT----IYSNHL 150
Query: 132 YVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQT------YMLP------------- 172
Y T GS+ D NG IW LP
Sbjct: 151 Y--------------THTHDGSVTSFDATNGAKIWNVTNNIPEITLPSDSSPIILNDTVM 196
Query: 173 -------------DNGGKRGGYSGAAVWGSSPAIDVIRRQKQNNQTTKPTHPDQCISSDI 219
DNG + A GSSPA K + T+ P +
Sbjct: 197 VGSAFGTVLGFTLDNGDRTINLPIAIAHGSSPA------DKMVDITSNPMLYGNYLIFGA 250
Query: 220 YANSIVALDIDSGRIAWAK 238
Y +IVALD D+G++ WAK
Sbjct: 251 YQGAIVALDRDTGKMLWAK 269
>gi|424790513|ref|ZP_18217054.1| quinoprotein glucose dehydrogenase [Xanthomonas translucens pv.
graminis ART-Xtg29]
gi|422798006|gb|EKU26175.1| quinoprotein glucose dehydrogenase [Xanthomonas translucens pv.
graminis ART-Xtg29]
Length = 697
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 76/357 (21%), Positives = 127/357 (35%), Gaps = 97/357 (27%)
Query: 20 INPVTVRNLRLRWSFYAG-----------KDISATPAVANGVVYFPSWNGYLYAVNAFNG 68
I P V LR+ WSF G + A P V +G +Y + G +A++A +G
Sbjct: 47 ITPDNVGRLRIAWSFRTGELGAGLPDPERRRFEANPLVLDGRMYLVTGTGIAFALDAASG 106
Query: 69 ALIWEQNLSKLTG-------LSGTGIVVNVTVAVVVAVSR-----SNGELVWSTQIDPRP 116
+W + G G + A R + L+ D RP
Sbjct: 107 RELWSFDAKVARGKRYSDPAARGVSFWRDTQAAADACRERIVFGTLDARLIALDAADGRP 166
Query: 117 RSQITMSGSVYMGAFYVGLSSLEEALPADQCCTF-------------------------- 150
+ ++G++ + + G+ + P D +
Sbjct: 167 CAGFGIAGTIDL---HAGIDVHDR--PGDTWANYAVTSPPVVAGDVLVVGSSIGDNRGHA 221
Query: 151 --RGSLAKLDVRNGRIIWQ-------------TYMLPDNGGKRGGYSGAAVWGSSPAIDV 195
+G + D R+GR +W+ P GG + A PA+ +
Sbjct: 222 LEQGVVRGYDARSGRALWRWDPVPRDPAAATAAGWQPQQAATVGGGNAWAPLAVDPALGL 281
Query: 196 IRRQKQNNQTTKPTHPD----QCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCL 251
+ T PD + + + ANS+VALD+ SGR WA+ L +D++
Sbjct: 282 V------YVPTGSASPDYYGGERLGDNRDANSLVALDLHSGRRVWAQQLVHHDLW----- 330
Query: 252 VPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDIIW 308
D D P+L T+ T R+ V+ K+GF +AFDR G +++
Sbjct: 331 -------------DYDLASQPVLTTLQTAQGPREAVLQATKTGFLFAFDRRDGSLVF 374
>gi|118498116|ref|YP_899166.1| hypothetical protein FTN_1548 [Francisella novicida U112]
gi|194323343|ref|ZP_03057127.1| hypothetical lipoprotein [Francisella novicida FTE]
gi|118424022|gb|ABK90412.1| conserved protein of unknown function [Francisella novicida U112]
gi|194322707|gb|EDX20187.1| hypothetical lipoprotein [Francisella tularensis subsp. novicida
FTE]
Length = 456
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 84/231 (36%), Gaps = 60/231 (25%)
Query: 44 PAVANGVVYFPSWNGYLYAVNAFNGALIWEQ----NLSKLTGLSGTGIVVNVTVAVVVAV 99
PA AN ++ P+ NG YA+ NG +IW+ NLS ++ + A+
Sbjct: 63 PAYANDTIFVPNQNGMAYALAITNGKIIWKNDTGTNLSVQPNTIANAVIFGSIKGTLTAI 122
Query: 100 SRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDV 159
+G+ +W T SQ T +Y + Y+ T GS++ D
Sbjct: 123 DDKDGQTLWRTDAPSSIFSQPT----IYDNSIYL--------------QTHDGSVSAFDA 164
Query: 160 RNGRIIWQT------YMLPDN------------GGKRGGYSG--------------AAVW 187
RNG W LP N G G G A
Sbjct: 165 RNGSKEWSVANNIPEITLPSNSSPIILNNTVMIGNAFGAVLGFTIKSGDRTINIPIAISH 224
Query: 188 GSSPAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAK 238
GSSPA K + T P D + Y +IVALD DSG++ WAK
Sbjct: 225 GSSPA------DKMVDITANPMLYDHYLIFAAYQGAIVALDKDSGKMLWAK 269
>gi|15679482|ref|NP_276599.1| serine/threonine protein kinase-like protein [Methanothermobacter
thermautotrophicus str. Delta H]
gi|2622601|gb|AAB85960.1| serine/threonine protein kinase related protein
[Methanothermobacter thermautotrophicus str. Delta H]
Length = 407
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 66/141 (46%), Gaps = 13/141 (9%)
Query: 6 GDLNNRRYAYGEVLINPVTVRNLRLRWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNA 65
G L+ R YA V + + WS+ I ++P V NG V+ SW+GYLYA++
Sbjct: 74 GSLDGRLYA--------VNLETGSVVWSYKTEGAIVSSPVVVNGTVFVGSWDGYLYAIDT 125
Query: 66 FNGALIWE----QNLSKLTGLSGTGIVVNVTVAVVVAVSRSNGELVWSTQI-DPRPRSQI 120
G L W+ + +SG + + V AV R +G W D S +
Sbjct: 126 DTGDLEWKFKTGNRIESSPAVSGDTVYIGSDDCRVYAVDRDDGSKKWEFYTGDAVKSSPL 185
Query: 121 TMSGSVYMGAFYVGLSSLEEA 141
++G++Y+G+F + +L E+
Sbjct: 186 PVNGTLYVGSFNGKVYALSES 206
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 66/156 (42%), Gaps = 30/156 (19%)
Query: 40 ISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTGLSGTGIVVNVTVAV---- 95
I ++PA+ N V Y S +G LYAVN G+++W + + +VVN TV V
Sbjct: 60 IKSSPAIFNKVAYIGSLDGRLYAVNLETGSVVWSYKTEG--AIVSSPVVVNGTVFVGSWD 117
Query: 96 --VVAVSRSNGELVWSTQIDPRPRSQITMSG-SVYMGA------------------FYVG 134
+ A+ G+L W + R S +SG +VY+G+ FY G
Sbjct: 118 GYLYAIDTDTGDLEWKFKTGNRIESSPAVSGDTVYIGSDDCRVYAVDRDDGSKKWEFYTG 177
Query: 135 LSSLEEALPADQCC---TFRGSLAKLDVRNGRIIWQ 167
+ LP + +F G + L +G +W
Sbjct: 178 DAVKSSPLPVNGTLYVGSFNGKVYALSESDGNEVWS 213
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 63/146 (43%), Gaps = 30/146 (20%)
Query: 31 RWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTGLSGTGIVVN 90
+W FY G + ++P NG +Y S+NG +YA++ +G +W + + + + N
Sbjct: 171 KWEFYTGDAVKSSPLPVNGTLYVGSFNGKVYALSESDGNEVW--SYTSGDAIRSSPAFWN 228
Query: 91 VTVAV------VVAVSRSNGELVWSTQIDPRPRSQ---ITMSGSVYMGAFYVGLSSLEEA 141
TV V + A+S S+G ++W + R S T SV++G
Sbjct: 229 GTVYVGSDDGNIYALSESDGNVIWKYSLGDRVYSSPSVDTEENSVFIG------------ 276
Query: 142 LPADQCCTFRGSLAKLDVRNGRIIWQ 167
C G++ LD R G + W
Sbjct: 277 ------CD-DGNITSLDTRTGALKWS 295
>gi|349699953|ref|ZP_08901582.1| alcohol dehydrogenase large subunit [Gluconacetobacter europaeus
LMG 18494]
Length = 708
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 76/361 (21%), Positives = 131/361 (36%), Gaps = 84/361 (23%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRW--SFYAGKDISATPAVANGVVYFPSWNG 58
W+ +G + +RY+ + IN V NL+L W + TP V +GV+Y +
Sbjct: 25 WMTYGRTYSEQRYSPLD-QINRSNVGNLKLAWYLDLDTNRGQEGTPLVVDGVMYATTNWS 83
Query: 59 YLYAVNAFNGALIWEQNLSKLTGLSGTGIVVNVTVAV---------------VVAVSRSN 103
+ AV+A G L+W + ++ G V ++A+
Sbjct: 84 MMKAVDAATGKLLWSYDPRVPGNIADKGCCDTVNRGAAYWNGKVYFGTFDGRLIALDAKT 143
Query: 104 GELVWSTQIDPRPRSQI------TMSGS--VYMGAFYVGLSSLEEALPADQCCTFRGSLA 155
G+LVWS P P +++ T+ G+ + G +G E RG +
Sbjct: 144 GKLVWSVNTIP-PEAELGKQRSYTVDGAPRIAKGRVIIGNGGSEFGA--------RGFVT 194
Query: 156 KLDVRNGRIIWQTYMLPDNGG--------------------------KRGGYSGAAVWGS 189
D G++ W+ + +P+ ++GG G VW S
Sbjct: 195 AFDAETGKVDWRFFTVPNPKNEPDHAASDSVLMNKAYQTWSPTGAWTRQGG--GGTVWDS 252
Query: 190 ---SPAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIF 246
P D++ N + + +++ SIVAL ++G W D +
Sbjct: 253 IVYDPVADLVYLGVGNGSPWNYKYRSEGKGDNLFLGSIVALKPETGEYVWHFQETPMDQW 312
Query: 247 YFTCLVPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDI 306
FT + + M L + NG R V+V K+GF + D +G+
Sbjct: 313 DFTSV------------------QQIMTLDLPINGETRHVIVHAPKNGFFYIIDAKTGEF 354
Query: 307 I 307
I
Sbjct: 355 I 355
>gi|296115131|ref|ZP_06833772.1| alcohol dehydrogenase [acceptor] precursor [Gluconacetobacter
hansenii ATCC 23769]
gi|295978232|gb|EFG84969.1| alcohol dehydrogenase [acceptor] precursor [Gluconacetobacter
hansenii ATCC 23769]
Length = 709
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 75/361 (20%), Positives = 131/361 (36%), Gaps = 84/361 (23%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRW--SFYAGKDISATPAVANGVVYFPSWNG 58
W+ +G + +RY+ + IN V NL+L W + TP V +GV+Y +
Sbjct: 26 WMTYGRTYSEQRYSPLD-QINRSNVGNLKLAWYLDLDTNRGQEGTPLVVDGVMYATTNWS 84
Query: 59 YLYAVNAFNGALIWEQNLSKLTGLSGTGIVVNVTVAV---------------VVAVSRSN 103
+ A++A G L+W + ++ G V ++A+
Sbjct: 85 MMKAIDAATGKLLWSYDPRVPGNIADKGCCDTVNRGAAYWNGKVYFGTFDGRLIALDAKT 144
Query: 104 GELVWSTQIDPRPRSQI------TMSGS--VYMGAFYVGLSSLEEALPADQCCTFRGSLA 155
G+LVWS P P +++ T+ G+ + G +G E RG +
Sbjct: 145 GKLVWSVNTIP-PEAELGKQRSYTVDGAPRIAKGRVIIGNGGSEFGA--------RGFVT 195
Query: 156 KLDVRNGRIIWQTYMLPDNGG--------------------------KRGGYSGAAVWGS 189
D G++ W+ + +P+ ++GG G VW S
Sbjct: 196 AFDAETGKVDWRFFTVPNPKNEPDHAASDSVLMNKAYQTWSPTGAWTRQGG--GGTVWDS 253
Query: 190 ---SPAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIF 246
P D++ N + + +++ SIVAL ++G W D +
Sbjct: 254 IVYDPVTDLVYLGVGNGSPWNYKYRSEGKGDNLFLGSIVALKPETGEYVWHFQETPMDQW 313
Query: 247 YFTCLVPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDI 306
FT + + M L + NG R V+V K+GF + D +G+
Sbjct: 314 DFTSV------------------QQIMTLDLPINGETRHVIVHAPKNGFFYIIDAKTGEF 355
Query: 307 I 307
I
Sbjct: 356 I 356
>gi|357385616|ref|YP_004900340.1| methanol dehydrogenase large subunit protein [Pelagibacterium
halotolerans B2]
gi|351594253|gb|AEQ52590.1| methanol dehydrogenase large subunit protein [Pelagibacterium
halotolerans B2]
Length = 590
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 71/323 (21%), Positives = 119/323 (36%), Gaps = 61/323 (18%)
Query: 27 NLRLRWSFYAGKDI-SATPAVANGVVYFPSWNGYLYAVNAFNGALIW--EQNLSKLTGLS 83
L+L W+ I TP V +G ++FP N + A +A GAL W E+ L
Sbjct: 73 QLQLVWTRGLASGIGEGTPLVYDGWMFFPQTNDIIEAYDAATGALAWRYERELPADLNEY 132
Query: 84 GTGIVVNVTVAV-------------VVAVSRSNGELVWSTQI-DPRPRSQITMSGSVYMG 129
+N +A+ ++A+ G++ W TQI D + +G + +
Sbjct: 133 MPFTQINRNLAIYDDVIIDTTGDNYLLALDAQTGQIAWETQINDYQVTPAQHTTGPIVVN 192
Query: 130 AFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYSGAAVWGS 189
+ + E + + C ++ D +G ++W+T +P R G G WG
Sbjct: 193 GKIISTAGCEPSAGPEAC-----AVVAHDAESGELLWRTLNIP-----REGEEGDESWGD 242
Query: 190 -----------------SPAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSG 232
P +++I + +Y NS +ALD D+G
Sbjct: 243 VPYEGRWHVGAWMAPSYDPELNLIIYGTSVTAPAPKFMLGGTENQHLYHNSTIALDADTG 302
Query: 233 RIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTIS------TNGRFRDV 286
W Y+ L+ N P L D AP ++ GR V
Sbjct: 303 ERVW----------YYQHLIDNWDLDHPFERLLVDTVVAPDADDVAWINPDIEEGRQYRV 352
Query: 287 VVAVQ-KSGFAWAFDRDSGDIIW 308
V V K+G + DR++G+ +W
Sbjct: 353 VTGVPGKTGIVYTLDRETGEFLW 375
>gi|448412416|ref|ZP_21576531.1| Pyrrolo-quinoline quinone [Halosimplex carlsbadense 2-9-1]
gi|445668177|gb|ELZ20808.1| Pyrrolo-quinoline quinone [Halosimplex carlsbadense 2-9-1]
Length = 355
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 56/111 (50%), Gaps = 4/111 (3%)
Query: 24 TVRNLRLRWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNL--SKLTG 81
T R +L+W F + +PA+A G VY SW+G LYA+N NG+L W+ S++ G
Sbjct: 34 TSRTGKLQWGFETDDTVYNSPAIAEGTVYVGSWDGNLYALNTANGSLDWKLEAVGSEVYG 93
Query: 82 --LSGTGIVVNVTVAVVVAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGA 130
++ + V +V A+ ++G W Q++ + VY+GA
Sbjct: 94 PVVADNTVFVCDNRTIVYALDATDGTEQWRKQVEAAVTIPVVGDQRVYVGA 144
>gi|71278551|ref|YP_268617.1| quinoprotein alcohol dehydrogenase [Colwellia psychrerythraea 34H]
gi|71144291|gb|AAZ24764.1| quinoprotein alcohol dehydrogenase [Colwellia psychrerythraea 34H]
Length = 587
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 73/351 (20%), Positives = 138/351 (39%), Gaps = 75/351 (21%)
Query: 2 LNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAG----KDISATPAVANGVVYFPSWN 57
+++G L +RY+ + IN TV+ +R WSF G + + P V +GV+Y
Sbjct: 44 VSYGLGLRGQRYSPLDK-INIDTVKEMRPVWSFSLGGEKQRGQESQPMVKDGVMYITGSY 102
Query: 58 GYLYAVNAFNGALIWEQN-------------LSKLTGLSGTGIVVNVTVAVVVAVSRSNG 104
+YA++ G +W+ + +++ L G ++ A +VA+ + G
Sbjct: 103 SRVYAIDVHTGDELWQYDARLPDGIMPCCDVINRGAALYGDLVIFATLDAKLVALHKDTG 162
Query: 105 ELVWSTQI-DPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGR 163
++VW ++ D + IT + + G G++ E + G + D NG+
Sbjct: 163 KVVWKKKVEDYKAGYSITAAPIIVKGKVITGVAGGEFGV--------VGKVRAYDATNGK 214
Query: 164 IIWQTYMLP-------------DN---GGKRGGYSGAAVWGSSPA-----------IDVI 196
++W+ + DN GGK G A +W S A +D++
Sbjct: 215 LVWERPTVEGHMGYIWKNGKKVDNGISGGKPGQTWPAELWKSGGAAPWLGGTYDADVDLL 274
Query: 197 RRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNP 256
N P + +++++S +A+D D+G+I W +F
Sbjct: 275 FFGTGN---PAPWNSHLRPGDNLFSSSRLAIDPDTGKIVW----------HFQTT----- 316
Query: 257 DCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
P D D + NG+ ++GF + +R++GD I
Sbjct: 317 ---PHDGWDFDGVNELISFDYKQNGKTVKAAATADRNGFFYVLNRENGDFI 364
>gi|355572913|ref|ZP_09043911.1| PKD domain containing protein [Methanolinea tarda NOBI-1]
gi|354824028|gb|EHF08285.1| PKD domain containing protein [Methanolinea tarda NOBI-1]
Length = 1627
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 77/166 (46%), Gaps = 23/166 (13%)
Query: 30 LRWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQN-LSKLTGLSGTGIV 88
L W G ++++P+VA G+VY S + LYA+NA G ++W+ + + + +S + V
Sbjct: 1012 LLWMCQTGARVTSSPSVAGGIVYIGSQDRNLYALNATTGEILWKYDTMERNDIVSSSPAV 1071
Query: 89 VNVTVAV------VVAVSRSNGELVWSTQIDPR--PRSQITMSGSVYMGAFYVGLSSLEE 140
N V + V AV +G+L+W ++ R RS I+ S +V G ++
Sbjct: 1072 ANGVVYIGGLKTKVHAVDAYSGDLLWKYKVPIRTTSRSGISSSPTVTGGTIFI------- 1124
Query: 141 ALPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYSGAAV 186
G + D G ++W + GG+RG Y+ AV
Sbjct: 1125 -------ANMDGVVYAFDEETGTLLWNYTVPQATGGERGIYASPAV 1163
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 61/142 (42%), Gaps = 23/142 (16%)
Query: 30 LRWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWE-----QNLSKLTGLSG 84
L W+F AG +I ++PAVA G VY +G L A+NA GAL+W +S + G
Sbjct: 605 LLWTFDAGAEIRSSPAVARGAVYITGRDGTLSALNATTGALLWSFATGADLVSSSPVVFG 664
Query: 85 TGIVVNVTVAVVVAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPA 144
+ A+ + G+L+W+ P S ++G G Y G
Sbjct: 665 NTACFRAAEGNLYALDATTGDLLWTAPASPAEESGPAVAG----GMVYTGDG-------- 712
Query: 145 DQCCTFRGSLAKLDVRNGRIIW 166
G+++ LD +G IW
Sbjct: 713 ------NGTVSALDAADGSPIW 728
Score = 44.7 bits (104), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 61/142 (42%), Gaps = 20/142 (14%)
Query: 30 LRWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLT----GLSGT 85
L W++ + ++PAV +GVVY S +G +YA++A +GAL+W ++G
Sbjct: 206 LLWNYTTSGPVQSSPAVVDGVVYVGSDDGTVYALSAPDGALLWNFTTGGAVRSGPAVAGG 265
Query: 86 GIVVNVTVAVVVAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPAD 145
+ V + A+ G VWS Q S I+ S +V G Y G S
Sbjct: 266 VVYVGSDDGRLYALDAHTGNPVWSYQAG----SGISASPAVAGGVVYAGTSGSP------ 315
Query: 146 QCCTFRGSLAKLDVRNGRIIWQ 167
G+ LD G ++W
Sbjct: 316 ------GTFFALDASTGDLLWD 331
Score = 42.0 bits (97), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 67/159 (42%), Gaps = 23/159 (14%)
Query: 13 YAYGEVLINPVTVRNLRLRWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIW 72
Y G +N + +L WS G +S +PAV +GVVY S + + A+NA GAL+W
Sbjct: 509 YVNGIYEMNALDALTGKLLWSSPHGGGMS-SPAVVDGVVYTGSSDRTICALNATTGALLW 567
Query: 73 EQNLSKLT----GLSGTGIVVNVTVAVVVAVSRSNGELVWSTQIDPRPRSQITMSGSVYM 128
+ K ++G + T + A+ G L+W+ RS S +V
Sbjct: 568 QYTTEKTVYSSPAVAGGIVYTGGTDEKLYALDAGTGALLWTFDAGAEIRS----SPAVAR 623
Query: 129 GAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQ 167
GA Y+ G+L+ L+ G ++W
Sbjct: 624 GAVYI--------------TGRDGTLSALNATTGALLWS 648
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 38/67 (56%), Gaps = 8/67 (11%)
Query: 6 GDLNNRRYAYGEVLINPVTVRNLRLRWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNA 65
G ++N YA + + + W+F G + ++PAVA+GVVY S + LYA++A
Sbjct: 1254 GSMDNSIYA--------LDASDGTILWNFTTGDKVYSSPAVAHGVVYAGSNDCNLYALDA 1305
Query: 66 FNGALIW 72
+G L+W
Sbjct: 1306 SDGRLLW 1312
Score = 38.9 bits (89), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 56/142 (39%), Gaps = 22/142 (15%)
Query: 30 LRWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQN----LSKLTGLSGT 85
L W++ G + + PAV +GVVY S + L A++A GAL+W + ++G
Sbjct: 45 LLWTYMTGGKVRSCPAVVDGVVYVGSRDHTLSALSADTGALLWNVTVGGGIESGPAVAGG 104
Query: 86 GIVVNVTVAVVVAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPAD 145
+ V A + S+G W+ RS ++G G Y G +
Sbjct: 105 LVYTGSADGSVYAFNASDGSQAWTCTTGGAVRSGPAVAG----GLVYTGSND-------- 152
Query: 146 QCCTFRGSLAKLDVRNGRIIWQ 167
G + LD G WQ
Sbjct: 153 ------GKVYALDAETGEPAWQ 168
Score = 38.9 bits (89), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 28/41 (68%)
Query: 32 WSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIW 72
W++ AG + P+VANG+VY S +G ++A++A G L+W
Sbjct: 728 WTYTAGAPVRHGPSVANGIVYAGSTDGTIHALDAATGDLLW 768
>gi|448327949|ref|ZP_21517267.1| alcohol dehydrogenase [Natrinema versiforme JCM 10478]
gi|445616799|gb|ELY70412.1| alcohol dehydrogenase [Natrinema versiforme JCM 10478]
Length = 569
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 68/329 (20%), Positives = 122/329 (37%), Gaps = 50/329 (15%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRW--SFYAGKDISATPAVANG---VVYFPS 55
WL +GG+ R + I P V +L L + S G + TP V G V+Y +
Sbjct: 63 WLMYGGNYEQHRATPADT-ITPENVSDLELEYEMSVGTGSSMEGTPIVIPGDPPVMYQTN 121
Query: 56 WNGYLYAVNAFNGALIWEQNLSKLTGLS-------------GTGIVVNVTVAVVVAVSRS 102
++ A++ G ++W + G+ G + + + VVA+ R
Sbjct: 122 GPNHMKAIDPREGEVLWSYTYAPPIGVELCCDDNNRGAAVLGDKVYMTTLDSGVVALDRY 181
Query: 103 NGELVWSTQI-DPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRN 161
GE VW TQ D T + ++ G Y G + E + G +A LD +
Sbjct: 182 TGEEVWYTQTADHEVGYSATWAPVIHDGTIYTGSAGGEYGV--------IGFIAALDAES 233
Query: 162 GRIIWQTYMLPDNG--GKRGGYSGAAVWGSSPAIDVIRRQKQNNQTTKPTHPDQCIS--S 217
G I W+ + LP++ G+ + W +P ID R + D +
Sbjct: 234 GEIQWRQHTLPEDEWVGESRTHGCGTSW-MTPTIDEERGVLHSPVANPGPDFDGTVRPGP 292
Query: 218 DIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTI 277
+ + ++++ G W +D++ + P +L +
Sbjct: 293 NFPTCGTITMNLEDGETEWGFQSSPHDVWDYDAAAPRV-----------------LLRDV 335
Query: 278 STNGRFRDVVVAVQKSGFAWAFDRDSGDI 306
D+VV K+G+ + D +SG +
Sbjct: 336 EVEDGSMDMVVGSDKAGWVYMMDAESGKL 364
>gi|148255328|ref|YP_001239913.1| alcohol dehydrogenase [Bradyrhizobium sp. BTAi1]
gi|146407501|gb|ABQ36007.1| putative Alcohol dehydrogenase (acceptor) [Bradyrhizobium sp.
BTAi1]
Length = 580
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 66/305 (21%), Positives = 119/305 (39%), Gaps = 49/305 (16%)
Query: 20 INPVTVRNLRLRWSFYAG--KDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWE---- 73
IN V+N+ W+F G + A P V NGV++ + G + A+NA G W
Sbjct: 69 INTTNVKNMVPVWTFATGVIEGHEAPPLVNNGVMFITTPMGQVIALNAKTGDQYWRYKRE 128
Query: 74 --QNLSKL------TGLSGTGIVVNVTVAVVVAVSRSNGELVWSTQIDPRPRSQ-ITMSG 124
++L +L GL + + T +VA+ G+++W ++ + Q +T+
Sbjct: 129 LPEDLFQLHPTNRGVGLWQDKLYLATTDDHLVALDAKTGKVLWDKKVQDYKKGQYLTLMP 188
Query: 125 SVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNG--------G 176
+ G VG S E + RG + D +G+ +W+T+ +P G G
Sbjct: 189 LIVDGKVIVGGSGGEFGV--------RGYVVAYDAEDGKELWRTFTIPGEGEPGHDTWSG 240
Query: 177 KRGGYSGAAVWGSSPAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAW 236
G + W + + P ++Y +S++ALD +G+I
Sbjct: 241 DDWKSGGGSAWMTGTYDTDTKTVYWGVGNAAPWPGGLHPGDNLYTSSVIALDPATGKIK- 299
Query: 237 AKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFA 296
T + D + D D +APML+ + +GR ++ +
Sbjct: 300 ------------THFQYHQND-----SWDWDEVDAPMLVDLQRDGRSFKSLIHPGRDAIF 342
Query: 297 WAFDR 301
W +R
Sbjct: 343 WVLER 347
>gi|338214402|ref|YP_004658463.1| quinoprotein glucose dehydrogenase [Runella slithyformis DSM 19594]
gi|336308229|gb|AEI51331.1| Quinoprotein glucose dehydrogenase [Runella slithyformis DSM 19594]
Length = 733
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 88/367 (23%), Positives = 140/367 (38%), Gaps = 85/367 (23%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAGK---------DISATPAVANGVV 51
W +GG+ RY+ IN V L+L WS+ G+ DI P V NG++
Sbjct: 31 WPKYGGNSAGSRYSE-LTQINKQNVSQLQLAWSYDTGENNNPDGRGNDIQCQPIVVNGIL 89
Query: 52 YFPSWNGYLYAVNAFNGALIWEQNLSKLTGLSGTGIVVNVTV---------------AVV 96
Y + L+A +A G +W+ + L + V V A +
Sbjct: 90 YGTTPRLKLFAADAATGKELWKYDPMSNPNLKPSFHPVRGVVYWEEGDDKRILYSVGAKL 149
Query: 97 VAVSRSNGELVWS------TQIDPRPRSQITM-------------SGSVYMGAFYVGLSS 137
+A++ GEL+ S + + TM G VY +G S
Sbjct: 150 MAINALTGELIRSFGENGLVDLHAGLGDKATMGYDVNEFSIRSTTPGVVYKNLLIMGSSV 209
Query: 138 LE--EALPADQCCTFRGSLAKLDVRNGRIIW--QTYMLPDNGG----KRGGYS---GAAV 186
E +ALP G + DVR G++ W +T LP G + Y GA
Sbjct: 210 SEGGDALP--------GHIRAFDVRTGKLAWVFRTIPLPGEYGYETWAKDSYKKLGGANC 261
Query: 187 WGSSPAIDVIRRQKQNNQTTKPT---HPDQCISSDIYANSIVALDIDSGRIAWAKPLGGY 243
W D +R T P+ + ++++AN ++AL+ ++G+ W +
Sbjct: 262 WAGMVVDD--KRGTVFLGTGSPSVDFYGGDRKGANLFANCVIALNAETGKRIWHYQTVHH 319
Query: 244 DIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTISTNGRFR--DVVVAVQKSGFAWAFDR 301
D++ + D P PNL + P +GR R D V K G + FDR
Sbjct: 320 DLW--------DRDIPCPPNLITVMHKGP-------DGRLRKVDAVAQATKDGLIFIFDR 364
Query: 302 DSGDIIW 308
D+G ++
Sbjct: 365 DTGKPLF 371
>gi|448363123|ref|ZP_21551726.1| alcohol dehydrogenase [Natrialba asiatica DSM 12278]
gi|445647092|gb|ELZ00072.1| alcohol dehydrogenase [Natrialba asiatica DSM 12278]
Length = 569
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 70/330 (21%), Positives = 124/330 (37%), Gaps = 52/330 (15%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFY--AGKDISATPAVANG---VVYFPS 55
WL +GG+ R +V I P V +L L + G + TP V G ++Y +
Sbjct: 63 WLMYGGNYEQHRTTTADV-ITPDNVSDLELEYELSVGTGSSMEGTPIVVPGDPPIMYQTN 121
Query: 56 WNGYLYAVNAFNGALIWEQNLSKLTGLS-------------GTGIVVNVTVAVVVAVSRS 102
++ A++ G ++W + G+ G + + + +VA++R
Sbjct: 122 GPNHMKAIDPREGEVLWSYTYAPPIGVELCCDDNNRGAAVLGDTVYMTTLDSGIVALNRY 181
Query: 103 NGELVWSTQI-DPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRN 161
GE W TQ D T + +Y G Y G + E + G +A LD +
Sbjct: 182 TGEEEWHTQTADHEVGYSATWAPVIYDGTLYTGSAGGEYGV--------LGFIAGLDAES 233
Query: 162 GRIIWQTYMLPDN---GGKRGGYSGAAVWGSSPAIDVIRRQKQNNQTTKPTHPDQCISS- 217
G + W+ L ++ G R G + W +P ID R + D +
Sbjct: 234 GDVQWKCDTLLEDEWVGASREHGCGTS-W-MTPTIDEDRGVLYSPVANPGPDFDGTVRPG 291
Query: 218 -DIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLT 276
+ ++LD++SG W +D++ + P ++
Sbjct: 292 PNFPTCGTLSLDLESGEFNWGFQSSPHDVWDYDAAAPRV-----------------LVPD 334
Query: 277 ISTNGRFRDVVVAVQKSGFAWAFDRDSGDI 306
+ G D+VV KSG+ + D +SG +
Sbjct: 335 VEVEGESTDLVVGSDKSGWVYMMDAESGKL 364
>gi|349686988|ref|ZP_08898130.1| alcohol dehydrogenase large subunit [Gluconacetobacter oboediens
174Bp2]
Length = 708
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 75/359 (20%), Positives = 132/359 (36%), Gaps = 80/359 (22%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRW--SFYAGKDISATPAVANGVVYFPSWNG 58
W+ +G + +RY+ + IN V NL+L W + TP V +GV+Y +
Sbjct: 25 WMTYGRTYSEQRYSPLD-QINRSNVGNLKLAWYLDLDTNRGQEGTPLVVDGVMYATTNWS 83
Query: 59 YLYAVNAFNGALIWEQNLSKLTGLSGTGIVVNVTVAV---------------VVAVSRSN 103
+ AV+A G L+W + ++ G V ++A+
Sbjct: 84 MMKAVDAATGKLLWSYDPRVPGNIADKGCCDTVNRGAAYWNGKVYFGTFDGRLIALDAKT 143
Query: 104 GELVWSTQIDPRPRSQI------TMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKL 157
G+LVWS P P +++ T+ G+ + V + + A RG ++
Sbjct: 144 GKLVWSVNTIP-PEAELGKQRSYTVDGAPRIAKGRVIIGNGGSEFGA------RGFVSAF 196
Query: 158 DVRNGRIIWQTYMLPDNGG--------------------------KRGGYSGAAVWGS-- 189
D G++ W+ + +P+ ++GG G VW S
Sbjct: 197 DAETGKLDWRFFTVPNPKNEPDHAASDSVLMNKAYQTWSPTGAWTRQGG--GGTVWDSIV 254
Query: 190 -SPAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYF 248
P D++ N + + +++ SIVAL ++G W D + F
Sbjct: 255 YDPVSDLVYLGVGNGSPWNYKYRSEGKGDNLFLGSIVALKPETGEYVWHFQETPMDQWDF 314
Query: 249 TCLVPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
T + + M L + NG R V+V K+GF + D +G+ I
Sbjct: 315 TSV------------------QQIMTLDLPINGETRHVIVHAPKNGFFYIIDAKTGEFI 355
>gi|313201127|ref|YP_004039785.1| pyrrolo-quinoline quinone [Methylovorus sp. MP688]
gi|312440443|gb|ADQ84549.1| Pyrrolo-quinoline quinone [Methylovorus sp. MP688]
Length = 582
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 85/400 (21%), Positives = 140/400 (35%), Gaps = 119/400 (29%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAG--KDISATPAVANGVVYFPSWNG 58
W + G D +N+R+A +IN V L W F G TP VANGV+Y
Sbjct: 25 WPSFGRDYSNQRFA-PSTIINRQNVNQLAEAWRFKTGVVGSFQTTPIVANGVMYLSLPYN 83
Query: 59 YLYAVNAFNGALIWEQNLSK------LTGLSGTGIVV-------NVTVAVVVAVSRSNGE 105
++ A++A G +W + G + G+ V A ++A+ G+
Sbjct: 84 HVVALDARTGKELWRYEHQRRPEWKMCCGPANRGVAVAYGKVFMGTVDARLIALDARTGK 143
Query: 106 LVWSTQI----------------DPRPRSQ--------ITMSGSVYMGAFYVGLSSL--- 138
LVW DP R++ I M+ VY G VG++ +
Sbjct: 144 LVWDIDAVDQAVETEGQASLDSKDPNSRAKVSGGTGIGIAMAPIVYKGKVLVGITGVGYG 203
Query: 139 ------EEALPADQCCTFRGS------LAKLDVRNGRIIWQTYMLP-------------- 172
E P G +A DV +G+ +WQ +
Sbjct: 204 LHIDNPREDAPLGAVIGLAGRYGRPGFIAAFDVDSGKRVWQFDTISPEHWLGQFTVRTAD 263
Query: 173 ------DNGGKRGG---------YSGAAVWGSSPAIDVI---------RRQKQNNQTTKP 208
D ++ Y G + W S+PA+D Q N +P
Sbjct: 264 GITLDRDVATEKAQARQHPDAWRYGGGSAW-STPALDTDLGLLYFGTGNPSPQMNDIERP 322
Query: 209 THPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADF 268
++Y S+VALDI++G++ W +D++ + D
Sbjct: 323 -------GDNLYTVSLVALDIETGKLRWHYQQVPHDLWGY------------------DL 357
Query: 269 GEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDIIW 308
P+L G+ V K+G+ +A DR +G +++
Sbjct: 358 ASPPVLFDWQHAGKTIPAVGQASKTGWFYAHDRATGRLLF 397
>gi|154253034|ref|YP_001413858.1| quinoprotein glucose dehydrogenase [Parvibaculum lavamentivorans
DS-1]
gi|154156984|gb|ABS64201.1| Quinoprotein glucose dehydrogenase [Parvibaculum lavamentivorans
DS-1]
Length = 639
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 85/371 (22%), Positives = 141/371 (38%), Gaps = 92/371 (24%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAGKDISA------------TPAVAN 48
W ++GGD +R++ I P V NL W++ G D++A TP +
Sbjct: 23 WSHYGGDAGGQRHS-ASAQITPANVGNLAPAWTYSTG-DLTARADDMKSSAFEGTPVLVA 80
Query: 49 GVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG------------------------LSG 84
G + F S + A++ GA W + TG L
Sbjct: 81 GSLIFCSPFNEVIALDPGTGAEKWRYDPKVTTGYRPGNQFICRGVTPWVDAAAGEGDLCA 140
Query: 85 TGIVVNVTVAVVVAVSRSNGE------LVWSTQIDP------RPRSQITMSGSVYMGAFY 132
T + + + ++A+ G+ + +IDP QIT +V G
Sbjct: 141 TRLFMGTVDSRLIALDAGTGQPCLGFGMDGEVRIDPGMDLQWPGEFQITSPPAVADGVVV 200
Query: 133 VGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYML-----------PDNGGKRGGY 181
+G S++ + D +G++ D R G+ +W + P + G+
Sbjct: 201 IG-SAISDNRRVDAP---KGTVRAFDARTGKPLWDFNPVTRGAKDHPEDWPRGVAEHTGH 256
Query: 182 SGAAVWGSSPAIDVIRRQKQNNQTTKPTHPD----QCISSDIYANSIVALDIDSGRIAWA 237
A VW A + R T+ P+ PD + + YANS+VALD +G + W
Sbjct: 257 --ANVWAPMSADET--RGLFFLPTSSPS-PDFFGGERSGDNRYANSVVALDARTGDVRWH 311
Query: 238 KPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAW 297
+D++ D D P L+T++ G+ D VV V K+GF +
Sbjct: 312 FQTVHHDVW------------------DYDLPAQPSLVTLTREGKPLDAVVQVTKTGFVF 353
Query: 298 AFDRDSGDIIW 308
DRD+G I+
Sbjct: 354 VLDRDTGKPIF 364
>gi|146342325|ref|YP_001207373.1| quinoprotein ethanol dehydrogenase [Bradyrhizobium sp. ORS 278]
gi|146195131|emb|CAL79156.1| Putative Quinoprotein ethanol dehydrogenase [Bradyrhizobium sp. ORS
278]
Length = 554
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 76/332 (22%), Positives = 131/332 (39%), Gaps = 54/332 (16%)
Query: 2 LNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAGKDIS--ATPAVANGVVYFPSWNGY 59
LN+G N +R++ IN T +NL W++ D S + P V GV+Y + N
Sbjct: 37 LNYGMGYNLQRFS-PLTQINKDTAKNLVPVWNYSFADDRSEESQPLVYQGVLYVTTHNAT 95
Query: 60 LYAVNAFNGALIWEQN---------------LSKLTGLSGTGIVVNVTVAVVVAVSRSNG 104
+ AV+A G IW+ +++ L + A V+A+ G
Sbjct: 96 M-AVDAKTGKQIWKSKVEYPAETPRVVCCGIINRGAALYDGKVFRTTLDANVIALDAKTG 154
Query: 105 ELVWSTQI-DPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGR 163
+ +W + D + +T++ V G G+S E RG + D G+
Sbjct: 155 KELWRQKAADIKEGYSMTVAPLVADGVVLTGISGAEFGT--------RGFIDGWDPATGK 206
Query: 164 IIWQTYMLPDNGGKRGGYSGAAVW---GSSPAIDVIRRQKQNN-----QTTKPTHPDQCI 215
+W+T+ +P G W G S I +QN P +
Sbjct: 207 HLWRTHTVPTPDEPGGDTWKGDTWKLGGGSTWITGSYDPEQNTVFWGVGNPGPFNAAVRP 266
Query: 216 SSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLL 275
++Y S++ALD +G++ W F F+ PNNP D D +L
Sbjct: 267 GDNLYTCSVLALDPKTGKMKWH--------FQFS---PNNP-------FDYDAVAEMVLA 308
Query: 276 TISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
++ G+ V++ ++GF + DR +G ++
Sbjct: 309 DMNVEGKPTKVLMNANRNGFFYVLDRTNGKLL 340
>gi|392967771|ref|ZP_10333187.1| PQQ-dependent enzyme-like protein [Fibrisoma limi BUZ 3]
gi|387842133|emb|CCH55241.1| PQQ-dependent enzyme-like protein [Fibrisoma limi BUZ 3]
Length = 706
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 76/361 (21%), Positives = 132/361 (36%), Gaps = 84/361 (23%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAG--------KDISATPAVANGVVY 52
WL + G+ Y+ I P V++LR+ W++ +G + P V G++Y
Sbjct: 31 WLEYNGNGARNHYS-ALAQITPDNVQHLRVAWTYESGGADTVQNRTQMQCNPIVVGGILY 89
Query: 53 FPSWNGYLYAVNAFNGALIWEQNLSKLTGLSGTGIV--------------------VNVT 92
S +A++A G IW+ L+ G + G+ ++
Sbjct: 90 GVSAGTQAFALDAATGREIWKTALTDNGGTTSRGVTYWTDGRTAQIFFGAGKWLYALDAQ 149
Query: 93 VAVVVAVSRSNGELVWSTQIDPRPRSQITMSGS---VYMGAFYVGLSSLEEALPADQCCT 149
+A G + T ++ + +S + +Y VG A A+
Sbjct: 150 TGRPIASFGEQGRINLRTGLERPGADEYVVSNTPNTIYKNLLIVG------ARVAESETA 203
Query: 150 FRGSLAKLDVRNGRIIWQTYMLPDNGGK----------RGGYSGAAVWGSSPAIDVIRRQ 199
G + D R G+++W +P G R GA W AID
Sbjct: 204 LLGDVRAFDTRTGKLVWTFRTIPQAGETGYDTWSPRPGRQHVGGANAWAGM-AID----- 257
Query: 200 KQNNQTTKPT-------HPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLV 252
++ PT + S+++AN ++ALD +G+ W L +DI+
Sbjct: 258 RERGIVYIPTGSAAYDFYGGNRQGSNLFANCLLALDAQTGKRLWHFQLVHHDIW------ 311
Query: 253 PNNPDCPPGPNLDADFGEAPMLLTISTNG-----RFRDVVVAVQKSGFAWAFDRDSGDII 307
PP P P LLT++ G + D V + K G+ + FDR +G +
Sbjct: 312 ---DRDPPAP---------PNLLTVTHKGPDGKPKRIDAVAQITKQGYIFVFDRVTGKPL 359
Query: 308 W 308
+
Sbjct: 360 F 360
>gi|357032313|ref|ZP_09094252.1| alcohol dehydrogenase large subunit [Gluconobacter morbifer G707]
gi|356414085|gb|EHH67733.1| alcohol dehydrogenase large subunit [Gluconobacter morbifer G707]
Length = 758
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 74/358 (20%), Positives = 130/358 (36%), Gaps = 78/358 (21%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFY--AGKDISATPAVANGVVYFPSWNG 58
W+++G + +R++ IN V +L+L W + + TP + +GV+Y +
Sbjct: 55 WMSYGRSYSEQRFSPLN-QINRSNVGHLKLAWHYDLDTNRGQEGTPLIVDGVMYATTNWS 113
Query: 59 YLYAVNAFNGALIWEQNLSKLTGLSGTGIVVNVTVAV---------------VVAVSRSN 103
+ A++A G L+W+ + ++ G V ++A+
Sbjct: 114 KMKALDAATGKLLWDYDPKVPGNIADRGCCDTVNRGAAYWNGKVYFGTFDGRLIALDAKT 173
Query: 104 GELVWSTQIDPRP-----RSQITMSGS--VYMGAFYVGLSSLEEALPADQCCTFRGSLAK 156
G+LVWS P+ + T+ G+ + G +G E RG +
Sbjct: 174 GKLVWSVYTIPKEAQLGHQRSYTVDGAPRIAKGRVLIGNGGAEFGA--------RGFVTA 225
Query: 157 LDVRNGRIIWQTYMLP--DNG------------------GKRGGYS----GAAVWGS--- 189
D G++ W+ + +P DN GK G + G VW S
Sbjct: 226 YDAETGKLDWRFFTVPNPDNKPDGAASDKILMSKAFPTWGKNGAWKQQGGGGTVWDSLVY 285
Query: 190 SPAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFT 249
P D++ N + D++ SIVAL ++G W D + +T
Sbjct: 286 DPVTDLVYLAVGNGSPWNYKFRSEGKGKDLFLGSIVALKPETGEYVWHFQETPMDEWDYT 345
Query: 250 CLVPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
+ + M L + NG R V+V K+GF + D +G I
Sbjct: 346 SV------------------QQIMTLDLMVNGEKRHVIVHAPKNGFFYILDAKTGKFI 385
>gi|332306205|ref|YP_004434056.1| PQQ-dependent dehydrogenase [Glaciecola sp. 4H-3-7+YE-5]
gi|332173534|gb|AEE22788.1| PQQ-dependent dehydrogenase, methanol/ethanol family [Glaciecola
sp. 4H-3-7+YE-5]
Length = 587
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 72/354 (20%), Positives = 143/354 (40%), Gaps = 81/354 (22%)
Query: 2 LNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAG----KDISATPAVANGVVYFPSWN 57
+++G L +RY+ IN TV+ +R W+F G + + P + +GV+Y
Sbjct: 44 VSYGMGLRGQRYS-PLAKINTDTVQEIRPVWAFSLGGEKQRGQESQPLIKDGVMYVTGSY 102
Query: 58 GYLYAVNAFNGALIWEQN-------------LSKLTGLSGTGIVVNVTVAVVVAVSRSNG 104
+YA++A G +W+ + +++ L G ++ A +VA+++ G
Sbjct: 103 SRVYAIDANTGDELWQYDARLPDGIMPCCDVINRGVALYGELVIFGTLDAKLVALNKDTG 162
Query: 105 ELVWSTQI-DPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGR 163
++VW ++ D + IT + + G G++ E + G++ D NG+
Sbjct: 163 KVVWKKKVEDYKAGYSITAAPIIVKGKIITGVAGGEFGV--------VGNVRAYDAVNGQ 214
Query: 164 IIWQT--------YMLPDNGGKRGGYSGAA--------VWGS-----------SPAIDVI 196
++W+ Y+ D G SG +W S P +D++
Sbjct: 215 LVWERPTVEGHMGYIWKDGKKTENGISGGKPGQTWPGDLWKSGGAAPWLGGTYDPDVDLL 274
Query: 197 RRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAW---AKPLGGYDIFYFTCLVP 253
N P + +++++S +A+D D+G+I W + P G+D L+
Sbjct: 275 FFGTGN---PAPWNSHLRPGDNLFSSSRLAIDPDTGKIVWHFQSTPHDGWDFDGVNELI- 330
Query: 254 NNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
D+ E NG+ + ++GF + +R++GD I
Sbjct: 331 -----------SFDYKE---------NGKTIKAAGSADRNGFFYVLNRENGDYI 364
>gi|304322072|ref|YP_003855715.1| PQQ enzyme repeat family protein [Parvularcula bermudensis
HTCC2503]
gi|303300974|gb|ADM10573.1| PQQ enzyme repeat family protein [Parvularcula bermudensis
HTCC2503]
Length = 475
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 83/183 (45%), Gaps = 33/183 (18%)
Query: 6 GDLNNRRYAYGEVLINPVTVRNLRLRWSFYAGK-----------DISATPAVANGVVYFP 54
GDL ++ GEV+ V+ + R WS + + DI+ +P + G VY
Sbjct: 280 GDLLVAPFSSGEVVA--VSASSGRQLWSAFVARNSRLTAYSSLNDIAGSPVIDRGAVYAI 337
Query: 55 SWNGYLYAVNAFNGALIWEQNLSK--LTGLSGTGIVVNVTVAVVVAVSRSNGELVWSTQI 112
S +G L A++A G ++WEQ ++ + +SG I V T ++VAV RS+G + W +
Sbjct: 338 SHSGQLSAIDARTGRVVWEQPIASRNMPWVSGNFIYVVTTDGLLVAVHRSDGAVAWREDL 397
Query: 113 DP-----RPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQ 167
R S I +G + G V SS+ G L ++D +G ++ +
Sbjct: 398 TAYEGRGRKNSAIVWAGPILAGGSLVLASSV-------------GDLVQVDPEDGAVVGR 444
Query: 168 TYM 170
M
Sbjct: 445 YEM 447
>gi|254281920|ref|ZP_04956888.1| pyrrolo-quinoline quinone [gamma proteobacterium NOR51-B]
gi|219678123|gb|EED34472.1| pyrrolo-quinoline quinone [gamma proteobacterium NOR51-B]
Length = 693
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 73/318 (22%), Positives = 124/318 (38%), Gaps = 63/318 (19%)
Query: 20 INPVTVRNLRLRWSFY--AGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNL- 76
IN V L+L WS AG + TP + +GV++ N + AV A G L+W+
Sbjct: 190 INRENVAQLQLAWSLTMSAGSN-QGTPLIHDGVMFLTHPNNRIQAVEAATGTLLWDYQYD 248
Query: 77 ----SKLTG-------LSGTGIVVNVTVAVVVAVSRSNGELVWSTQIDPRPRSQITMSGS 125
+++ G + G + + A +VA+ ++GE VW T ++ +G
Sbjct: 249 FPPGARMLGGPTRNIAIYGDKVFLATYDAALVAIDATSGEEVWRTVKADYTQAYTHSAGP 308
Query: 126 VYM-GAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNG--------- 175
+ G G++ E L + C G D G +W+T L + G
Sbjct: 309 IIADGIVISGINGCE--LFTEDGCFITGH----DPDTGEELWRTQTLAEPGTEAYESWGD 362
Query: 176 ---GKRGGYSGAAVWGSSPAIDV----IRRQKQNNQTTKPTHPDQCISSDIYANSIVALD 228
+RGG P +++ + + K ++ D +Y NS +A+D
Sbjct: 363 IAPDRRGGGDSWIAGSYDPDLNLFFIGVSQAKPWVAVSRGMSVDDAA---LYTNSTLAID 419
Query: 229 IDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVV 288
SG I W YF + PG +D + G +L+ I + +++
Sbjct: 420 PKSGEIVW----------YFQHI--------PGETIDMEVGFERVLVDIDG----QKMLL 457
Query: 289 AVQKSGFAWAFDRDSGDI 306
V K G W DR +G+
Sbjct: 458 TVGKDGILWKLDRKTGEF 475
>gi|124265534|ref|YP_001019538.1| quinoprotein ethanol dehydrogenase [Methylibium petroleiphilum PM1]
gi|124258309|gb|ABM93303.1| putative quinoprotein ethanol dehydrogenase precursor [Methylibium
petroleiphilum PM1]
Length = 562
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 73/317 (23%), Positives = 126/317 (39%), Gaps = 59/317 (18%)
Query: 20 INPVTVRNLRLRW--SFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLS 77
IN TV+ L W S + S P + GV+Y + N + A++A +G W+ +
Sbjct: 57 INKTTVKRLVPAWNLSLDNSANASTQPLLIGGVMYVSTHNATV-AIDAESGRQKWKVAID 115
Query: 78 KLTGLSG--------------TGIVVNVTV-AVVVAVSRSNGELVWSTQI-DPRPRSQIT 121
++G G++ T+ A V+A+ ++G+ +W + D + +T
Sbjct: 116 LPADVNGYLCCGIQSRGMAALDGVLYRTTIDAHVLAIDMASGKTLWKQKAADYKQGYSMT 175
Query: 122 MSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNG------ 175
+ V G G+S E RG L D++ G W+T+ +P G
Sbjct: 176 HAPLVAGGVLITGISGGEYGT--------RGFLDGWDLKTGEKKWRTWTVPAPGEPGSET 227
Query: 176 --GKRGGYSGAAVWGS---SPAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDID 230
R GA W + P ++++ N P +P +Y SI+ALD
Sbjct: 228 WNADRHDKGGAPTWLTGTYDPELNLVYWGTGNG---GPWNPAWRGKDSLYICSILALDPA 284
Query: 231 SGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAV 290
+G+I W Y T PG D D +L + NG R V++
Sbjct: 285 TGKIVW---------HYQTS---------PGDPYDYDATNELVLGELPVNGAARKVLMQA 326
Query: 291 QKSGFAWAFDRDSGDII 307
++G+ + DR +G ++
Sbjct: 327 NRNGYFYVLDRSNGKLL 343
>gi|410641346|ref|ZP_11351866.1| alcohol dehydrogenase [cytochrome c] [Glaciecola chathamensis
S18K6]
gi|410645899|ref|ZP_11356354.1| alcohol dehydrogenase [cytochrome c] [Glaciecola agarilytica NO2]
gi|410134498|dbj|GAC04753.1| alcohol dehydrogenase [cytochrome c] [Glaciecola agarilytica NO2]
gi|410138879|dbj|GAC10053.1| alcohol dehydrogenase [cytochrome c] [Glaciecola chathamensis
S18K6]
Length = 587
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 72/354 (20%), Positives = 143/354 (40%), Gaps = 81/354 (22%)
Query: 2 LNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAG----KDISATPAVANGVVYFPSWN 57
+++G L +RY+ IN TV+ +R W+F G + + P + +GV+Y
Sbjct: 44 VSYGMGLRGQRYS-PLAKINTDTVQEIRPVWAFSLGGEKQRGQESQPLIKDGVMYVTGSY 102
Query: 58 GYLYAVNAFNGALIWEQN-------------LSKLTGLSGTGIVVNVTVAVVVAVSRSNG 104
+YA++A G +W+ + +++ L G ++ A +VA+++ G
Sbjct: 103 SRVYAIDANTGDELWQYDARLPDGIMPCCDVINRGVALYGELVIFGTLDAKLVALNKDTG 162
Query: 105 ELVWSTQI-DPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGR 163
++VW ++ D + IT + + G G++ E + G++ D NG+
Sbjct: 163 KVVWKKKVEDYKAGYSITAAPIIVKGKIITGVAGGEFGV--------VGNVRAYDAVNGQ 214
Query: 164 IIWQT--------YMLPDNGGKRGGYSGAA--------VWGS-----------SPAIDVI 196
++W+ Y+ D G SG +W S P +D++
Sbjct: 215 LVWERPTVEGHMGYIWKDGKKTENGISGGKPGQTWPGDLWKSGGAAPWLGGTYDPDVDLL 274
Query: 197 RRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAW---AKPLGGYDIFYFTCLVP 253
N P + +++++S +A+D D+G+I W + P G+D L+
Sbjct: 275 FFGTGN---PAPWNSHLRPGDNLFSSSRLAIDPDTGKIVWHFQSTPHDGWDFDGVNELI- 330
Query: 254 NNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
D+ E NG+ + ++GF + +R++GD I
Sbjct: 331 -----------SFDYQE---------NGKTIKAAGSADRNGFFYVLNRENGDYI 364
>gi|365891038|ref|ZP_09429510.1| putative Alcohol dehydrogenase (acceptor) [Bradyrhizobium sp. STM
3809]
gi|365333050|emb|CCE02041.1| putative Alcohol dehydrogenase (acceptor) [Bradyrhizobium sp. STM
3809]
Length = 580
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 66/305 (21%), Positives = 120/305 (39%), Gaps = 49/305 (16%)
Query: 20 INPVTVRNLRLRWSFYAG--KDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWE---- 73
IN V+++ W+F G + A P V NGV++ + G + A+NA G W
Sbjct: 69 INTTNVKSMVPVWTFATGVIEGHEAPPLVNNGVMFVTTPMGQVIALNAKTGDQYWRYKRE 128
Query: 74 --QNLSKL------TGLSGTGIVVNVTVAVVVAVSRSNGELVWSTQIDPRPRSQ-ITMSG 124
++L +L GL + + T +VA+ G+++W ++ + Q +T+
Sbjct: 129 LPEDLFQLHPTNRGVGLWQDKLYLATTDDHLVALDAKTGKVLWDKKVQDYKKGQYLTLMP 188
Query: 125 SVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNG--------G 176
+ G VG S E + RG +A D +G+ +W+T+ +P G G
Sbjct: 189 LIVDGRVMVGGSGGEFGV--------RGYVAAYDAEDGKELWRTFTIPAEGEPGHDTWSG 240
Query: 177 KRGGYSGAAVWGSSPAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAW 236
G + W + + P ++Y +S++ALD +G+I
Sbjct: 241 DDWKNGGGSAWMTGTYDKDTKTVYWGVGNAAPWPGGLHPGDNLYTSSVIALDPATGKIK- 299
Query: 237 AKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFA 296
T + D + D D +APML+ + +GR ++ +
Sbjct: 300 ------------THFQYHQND-----SWDWDEVDAPMLVDLQRDGRSFKSLIHPGRDAIF 342
Query: 297 WAFDR 301
W +R
Sbjct: 343 WVLER 347
>gi|146340834|ref|YP_001205882.1| alcohol dehydrogenase [Bradyrhizobium sp. ORS 278]
gi|146193640|emb|CAL77657.1| putative Alcohol dehydrogenase (acceptor) [Bradyrhizobium sp. ORS
278]
Length = 580
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 65/305 (21%), Positives = 120/305 (39%), Gaps = 49/305 (16%)
Query: 20 INPVTVRNLRLRWSFYAG--KDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWE---- 73
IN V+++ W+F G + + P V NGV++ + G + A+NA G W
Sbjct: 69 INTTNVKSMVPVWTFATGVIEGHESPPLVNNGVMFITTPMGQVIALNAKTGDQYWRYKRE 128
Query: 74 --QNLSKL------TGLSGTGIVVNVTVAVVVAVSRSNGELVWSTQIDPRPRSQ-ITMSG 124
++L +L GL + + T +VA+ G+++W ++ + Q +T+
Sbjct: 129 LPEDLFQLHPTNRGVGLWQDKLYLATTDDHLVALDAKTGKVLWDKKVQDYKKGQYLTLMP 188
Query: 125 SVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNG--------G 176
+ G VG S E + RG +A D +G+ +W+T+ +P G G
Sbjct: 189 LIVDGKVMVGGSGGEFGV--------RGYVAAYDAEDGKELWRTFTIPAEGEPGHDTWSG 240
Query: 177 KRGGYSGAAVWGSSPAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAW 236
G + W + + P ++Y +S++ALD +G+I
Sbjct: 241 DDWKNGGGSAWMTGTYDKDTKTVYWGVGNAAPWPGGMHPGDNLYTSSVIALDPATGKIK- 299
Query: 237 AKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFA 296
T + D + D D +APML+ + +GR ++ +
Sbjct: 300 ------------THFQYHQND-----SWDWDEVDAPMLVDLQRDGRSFKSLIHPGRDAIF 342
Query: 297 WAFDR 301
W +R
Sbjct: 343 WVLER 347
>gi|435847101|ref|YP_007309351.1| glucose dehydrogenase [Natronococcus occultus SP4]
gi|433673369|gb|AGB37561.1| glucose dehydrogenase [Natronococcus occultus SP4]
Length = 572
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 73/330 (22%), Positives = 127/330 (38%), Gaps = 48/330 (14%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRW--SFYAGKDISATPAVANG---VVYFPS 55
WL +GG+ R +V I P V +L + + AG + TP + G ++Y +
Sbjct: 63 WLTYGGNYEQHRRTTADV-ITPDNVADLEVEYILDVGAGSSMEGTPLIVPGDPPIMYQSN 121
Query: 56 WNGYLYAVNAFNGALIWE-------------QNLSKLTGLSGTGIVVNVTVAVVVAVSRS 102
++ A++A G ++W + ++ G + + + VVA+ R
Sbjct: 122 GPNHVKAIDAREGDILWSYTYAVPSDVVLCCDDNNRGVAAYGDKVFMTTLDSGVVALDRY 181
Query: 103 NGELVWSTQI-DPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRN 161
GE VW T D T + Y G + G + E + RG LD
Sbjct: 182 TGEEVWHTSTADHEEGYSATWAPIAYDGMIFTGSAGGEYGV--------RGFHKALDAET 233
Query: 162 GRIIWQTYMLPDNG--GKRGGYSGAAVWGSSPAIDVIRRQKQNNQTTKPTHPDQCISSDI 219
G +W T+ P+ G S A W ++ +DV +R+ D +
Sbjct: 234 GDELWHTWTSPETEWVGDSINQSCATNWMNA-TVDVEQRRLYLPIGNPGPDFDGSVRPGP 292
Query: 220 YANS--IVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTI 277
NS +ALD+D+G W +D++ + P L D + I
Sbjct: 293 NRNSCGTLALDMDTGERLWTHQEVAHDVWDYDSAAPR--------VLIRD-------MEI 337
Query: 278 STNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
+DVVV+ K+ + + D ++G++I
Sbjct: 338 EHRNTTKDVVVSAGKTAWLYTMDTETGELI 367
>gi|119477162|ref|ZP_01617398.1| Alcohol dehydrogenase large subunit [marine gamma proteobacterium
HTCC2143]
gi|119449525|gb|EAW30763.1| Alcohol dehydrogenase large subunit [marine gamma proteobacterium
HTCC2143]
Length = 734
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 81/361 (22%), Positives = 134/361 (37%), Gaps = 74/361 (20%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSF--YAGKDISATPAVANGVVYFPSWNG 58
WL +GG + +R++ +N V L + W++ + + +TP V NG++Y S
Sbjct: 75 WLTYGGTYDEQRHSK-LTSVNTENVSELGVAWTYDLKTNRGVESTPIVVNGIMYVTSAWS 133
Query: 59 YLYAVNAFNGALIWEQN--LSKLTGLSGTGIVVNVTVAV-------------VVAVSRSN 103
+YA++A G +W + + K G+ VVN VAV + A+
Sbjct: 134 LVYALDAKTGEELWTYDPMVDKAVGVKACCDVVNRGVAVYGNQVFVGVIDGRLEALDAET 193
Query: 104 GELVWS-TQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNG 162
G L WS +D IT + V G +G E + RG L NG
Sbjct: 194 GNLNWSVVTVDQSKPYTITGAPRVVDGRVLIGNGGAELGV--------RGYLTAYAADNG 245
Query: 163 RIIWQTYML------PDNGGKRGGYS--GAAVWGSS----------PAIDVIRRQKQNNQ 204
+W+ Y + PDN + G WG D I + N+Q
Sbjct: 246 EKLWRFYTVPNPNKQPDNEASDSAFVAIGNVTWGDEGHWTTDGGGGTVWDSIVYDEVNDQ 305
Query: 205 TT---------KPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNN 255
D +++ +SIVA+D +G+ W +F
Sbjct: 306 VIFGVGNGSPWNRNFRDPAGGDNLFLSSIVAVDASTGKYRW----------HF------- 348
Query: 256 PDCPPGPNLDADFGEAPML--LTISTNGRFRDVVVAVQKSGFAWAFDRDSGDIIWFKLAG 313
PG N D + +L + + +G V + K+GF + + +G+ I + G
Sbjct: 349 -QTTPGDNWDYTATQTIILADMPLGKDGAPLRVAMQAPKNGFFYVINAQNGEFISGEAFG 407
Query: 314 P 314
P
Sbjct: 408 P 408
>gi|298527971|ref|ZP_07015375.1| Pyrrolo-quinoline quinone [Desulfonatronospira thiodismutans ASO3-1]
gi|298511623|gb|EFI35525.1| Pyrrolo-quinoline quinone [Desulfonatronospira thiodismutans ASO3-1]
Length = 1670
Score = 54.7 bits (130), Expect = 8e-05, Method: Composition-based stats.
Identities = 58/216 (26%), Positives = 81/216 (37%), Gaps = 56/216 (25%)
Query: 32 WSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTGLS-----GTG 86
WSF I ++PAV GVVY S +G+LYAV+ G W N K S G+
Sbjct: 1395 WSFKTADTIFSSPAVVEGVVYTGSLDGFLYAVHQETGEEKWRFNADKDIVSSPYHWEGSA 1454
Query: 87 IVVNVTVAVVVAVSRSNGELVWSTQIDPRP-RSQITMSGSVYMGAFYVGLSSLEEALPAD 145
+ N+ V AV G+ +W + R S + + G VY G+ D
Sbjct: 1455 FISNLQ-GDVFAVDAETGDKIWKFESGSRSISSAVILDGVVYFGS-------------GD 1500
Query: 146 QCCTFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYSGAAVWGSSPAIDVIRRQKQNNQT 205
G L LD +NG +W + A SSPA+
Sbjct: 1501 ------GELIALDGKNGEKLWS-------------FETEAEILSSPALT----------- 1530
Query: 206 TKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLG 241
D + D N + ALD +SG+ W+ G
Sbjct: 1531 -----EDMVVVGDWQGN-VYALDAESGQELWSTQAG 1560
Score = 42.4 bits (98), Expect = 0.42, Method: Composition-based stats.
Identities = 24/105 (22%), Positives = 49/105 (46%), Gaps = 5/105 (4%)
Query: 32 WSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQN----LSKLTGLSGTGI 87
WS AG+D+ P +A +Y S GY+YA++ G IW+ + + ++G +
Sbjct: 1555 WSTQAGRDLLTVPVIARDRIYVGSLEGYMYALDLHTGKEIWKFDSGGGIQSSPAMAGNTL 1614
Query: 88 VVNVTVAVVVAVSRSNGELVWS-TQIDPRPRSQITMSGSVYMGAF 131
+ ++ A+ +G W + + S + ++ VY G++
Sbjct: 1615 YFGDSKGILYALDSESGREKWRFSALATIISSPLILNDIVYFGSY 1659
Score = 41.6 bits (96), Expect = 0.79, Method: Composition-based stats.
Identities = 34/143 (23%), Positives = 64/143 (44%), Gaps = 24/143 (16%)
Query: 31 RWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWE-----QNLSKLTGLSGT 85
+W F A KDI ++P G + + G ++AV+A G IW+ +++S L G
Sbjct: 1434 KWRFNADKDIVSSPYHWEGSAFISNLQGDVFAVDAETGDKIWKFESGSRSISSAVILDGV 1493
Query: 86 GIVVNVTVAVVVAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPAD 145
+ ++A+ NGE +WS + + ++I S ++ VG
Sbjct: 1494 -VYFGSGDGELIALDGKNGEKLWSFETE----AEILSSPALTEDMVVVG----------- 1537
Query: 146 QCCTFRGSLAKLDVRNGRIIWQT 168
++G++ LD +G+ +W T
Sbjct: 1538 ---DWQGNVYALDAESGQELWST 1557
>gi|148553976|ref|YP_001261558.1| quinoprotein glucose dehydrogenase [Sphingomonas wittichii RW1]
gi|148499166|gb|ABQ67420.1| Quinoprotein glucose dehydrogenase [Sphingomonas wittichii RW1]
Length = 669
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 68/166 (40%), Gaps = 33/166 (19%)
Query: 151 RGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYSGAA--VWGSSPAIDVIRRQKQNNQTTKP 208
RG + D R+GR IW +P GG + G + G++ VI + + P
Sbjct: 242 RGIIRAFDARSGREIWTFDPIPQQGGPDRDWMGDSRRTTGAANVWSVISGDPELDMVYLP 301
Query: 209 THPDQCISSDIY----------ANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDC 258
T S D Y ANS+VALD +GR+ WA+ L +DI+
Sbjct: 302 T---SSASPDYYGGLRPGDNRHANSVVALDAATGRLVWARQLIHHDIW------------ 346
Query: 259 PPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSG 304
D D P L+ I GR +V K G+ + FDR +G
Sbjct: 347 ------DYDIPAQPTLVDIDRGGRRIPALVQPTKQGYVFVFDRRTG 386
>gi|350421258|ref|XP_003492787.1| PREDICTED: hypothetical protein LOC100748976 [Bombus impatiens]
Length = 1520
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 68/293 (23%), Positives = 124/293 (42%), Gaps = 51/293 (17%)
Query: 31 RWSFYAGKD--ISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLS---KLTGLSGT 85
R SF++ + +S AV + VY S +YA+N G ++W+QN + + +S
Sbjct: 747 RGSFFSHQSSLLSGGVAVDSERVYVGSERAVIYALNRLTGEILWQQNSAGEIIASPVSAE 806
Query: 86 GIV-VNVTVAVVVAVSRSNGELVWSTQID-PRPRSQITMSGSVYMGAFYVGLSSLEEALP 143
G+V V+ T ++ A + NGELVW +D P + S +V VG +
Sbjct: 807 GLVLVHTTNGMLQAFNADNGELVWKVDLDVPLLSLRGQSSPAVTSDIVIVGDDN------ 860
Query: 144 ADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYSGAAVWGSSPAIDVIRRQKQNN 203
G + + ++NG ++WQ + + GG + A K N+
Sbjct: 861 --------GHINAMTLKNGVLLWQQRI-----SQPGGSNEIA--------------KLND 893
Query: 204 QTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYF---TCLVPNNPDCPP 260
P + I + Y +IV+LDI++G+ W + LG F +V + D
Sbjct: 894 VDVTPIVVNGAIYAIAYNGNIVSLDINTGQPLWHRKLGSTHTFTMDTQRIVVVDQNDTIQ 953
Query: 261 GPNLDADFGEAPMLLTISTNGR------FRDVVVAVQKSGFAWAFDRDSGDII 307
++D+ G + +N R +++ +V G+ + D+ +GD +
Sbjct: 954 AISVDS--GTELWIQNEMSNRRLTNPVIYQNYIVVGDYEGYLYLLDKQTGDFV 1004
>gi|311748620|ref|ZP_07722405.1| putative PQQ enzyme repeat [Algoriphagus sp. PR1]
gi|126577145|gb|EAZ81393.1| putative PQQ enzyme repeat [Algoriphagus sp. PR1]
Length = 705
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 76/354 (21%), Positives = 132/354 (37%), Gaps = 73/354 (20%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAGK-----DISATPAVANGVVYFPS 55
W ++GG + RY+ IN V L W ++ G I P V +G++Y S
Sbjct: 30 WSHYGGPEDGSRYS-SLTQINKDNVSQLAQAWVYHTGDATERSQIQCQPIVIDGILYGTS 88
Query: 56 WNGYLYAVNAFNGALIWEQNLSKLTG-----------------------LSGTG---IVV 89
+ ++A++A G IW + + G L G G + V
Sbjct: 89 PSLDVFALDAATGKEIWRFDPFDILGGENSWAGTNRGVSYWAEAEDKRILFGAGNWLMAV 148
Query: 90 NVTVAVVVAVSRSNGELVWSTQIDPRPRSQITMS---GSVYMGAFYVGLSSLEEALPADQ 146
+ ++ G++ +D + ++ G ++ +G+ L E L A
Sbjct: 149 DALTGNPISEFGDGGKVDLRKNLDTDRDDFLIVANAPGVIFKDKIIIGMR-LSEGLDAAP 207
Query: 147 CCTFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYSG------AAVWGSSPAIDVIRRQK 200
G + +V+ G+ W + +P G GY + G++ ++ QK
Sbjct: 208 -----GHIRAYNVKTGKREWIFHTIPQKG--EFGYDTWDSEFIQKIGGANNWAGMVVDQK 260
Query: 201 QN------NQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPN 254
+ T ++YANS+VALD ++G W +D++
Sbjct: 261 REIVFVPTGSATYDFWGGYRTGDNLYANSLVALDANTGERIWHFQAVHHDVW-------- 312
Query: 255 NPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDIIW 308
D DF P L+ I G + D V + K G + FDR+SG+ IW
Sbjct: 313 ----------DRDFPANPNLIRIQKEGEWIDAVAQISKQGMTYVFDRESGEPIW 356
>gi|410628085|ref|ZP_11338814.1| alcohol dehydrogenase [cytochrome c] [Glaciecola mesophila KMM 241]
gi|410152307|dbj|GAC25583.1| alcohol dehydrogenase [cytochrome c] [Glaciecola mesophila KMM 241]
Length = 587
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 72/354 (20%), Positives = 142/354 (40%), Gaps = 81/354 (22%)
Query: 2 LNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAG----KDISATPAVANGVVYFPSWN 57
+++G L +RY+ IN TV+ +R W+F G + + P + +GV+Y
Sbjct: 44 VSYGMGLKGQRYS-PLSKINGDTVKEIRPVWAFSLGGEKQRGQESQPLIKDGVMYVTGSY 102
Query: 58 GYLYAVNAFNGALIWEQN-------------LSKLTGLSGTGIVVNVTVAVVVAVSRSNG 104
+YA++A G +W+ + +++ L G ++ A +VA+++ G
Sbjct: 103 SRVYAIDANTGDELWQYDARLPDGIMPCCDVINRGVALYGELVIFGTLDAKLVALNKDTG 162
Query: 105 ELVWSTQI-DPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGR 163
++VW ++ D + IT + + G G++ E + G + D NG+
Sbjct: 163 KVVWKKKVEDYKAGYSITAAPIIVKGKIITGVAGGEFGV--------VGKVRAYDAVNGQ 214
Query: 164 IIWQT--------YMLPDNGGKRGGYSGAA--------VWGS-----------SPAIDVI 196
++W+ Y+ D G SG +W S P +D++
Sbjct: 215 LVWERPTVEGHMGYIWKDGKKTENGISGGKPGQTWPGDLWKSGGAAPWLGGTYDPDVDLL 274
Query: 197 RRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAW---AKPLGGYDIFYFTCLVP 253
N P + +++++S +A+D D+G+I W + P G+D L+
Sbjct: 275 FFGTGN---PAPWNSHLRPGDNLFSSSRLAIDPDTGKIVWHFQSTPHDGWDFDGVNELI- 330
Query: 254 NNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
D+ E NG+ + ++GF + +R++GD I
Sbjct: 331 -----------SFDYKE---------NGKTIKAAGSADRNGFFYVLNRENGDYI 364
>gi|6166117|sp|Q44002.1|DHET_ACEEU RecName: Full=Alcohol dehydrogenase [cytochrome c]; Flags:
Precursor
gi|1050421|emb|CAA58066.1| alcohol dehydrogenase [Gluconacetobacter europaeus]
gi|1694971|emb|CAA70688.1| dehydrogenase [Gluconacetobacter europaeus]
Length = 739
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 75/359 (20%), Positives = 130/359 (36%), Gaps = 80/359 (22%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRW--SFYAGKDISATPAVANGVVYFPSWNG 58
W+ +G + +RY+ + IN V NL+L W + TP V +GV+Y +
Sbjct: 56 WMTYGRTYSEQRYSPLD-QINRSNVGNLKLAWYLDLDTNRGQEGTPLVIDGVMYATTNWS 114
Query: 59 YLYAVNAFNGALIWEQNLSKLTGLSGTGIVVNVTVAV---------------VVAVSRSN 103
+ AV+A G L+W + ++ G V ++A+
Sbjct: 115 MMKAVDAATGKLLWSYDPRVPGNIADKGCCDTVNRGAAYWNGKVYFGTFDGRLIALDAKT 174
Query: 104 GELVWSTQIDPRPRSQI------TMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKL 157
G+LVWS P P +++ T+ G+ + V + + A RG +
Sbjct: 175 GKLVWSVNTIP-PEAELGKQRSYTVDGAPRIAKGRVIIGNGGSEFGA------RGFVTAF 227
Query: 158 DVRNGRIIWQTYMLPDNGG--------------------------KRGGYSGAAVWGS-- 189
D G++ W+ + P+ ++GG G VW S
Sbjct: 228 DAETGKVDWRFFTAPNPKNEPDHTASDSVLMNKAYQTWSPTGAWTRQGG--GGTVWDSIV 285
Query: 190 -SPAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYF 248
P D++ N + + +++ SIVAL ++G W D + F
Sbjct: 286 YDPVADLVYLGVGNGSPWNYKYRSEGKGDNLFLGSIVALKPETGEYVWHFQETPMDQWDF 345
Query: 249 TCLVPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
T + + M L + NG R V+V K+GF + D +G+ I
Sbjct: 346 TSV------------------QQIMTLDLPINGETRHVIVHAPKNGFFYIIDAKTGEFI 386
>gi|1722883|sp|P29968.2|XOXF_PARDE RecName: Full=Putative dehydrogenase XoxF; Flags: Precursor
gi|1002869|gb|AAC44555.1| PQQ-dependent dehydrogenase large subunit [Paracoccus
denitrificans]
Length = 600
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 81/360 (22%), Positives = 149/360 (41%), Gaps = 87/360 (24%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAG--KDISATPAVANGVVY----FP 54
W GD N RY+ + IN V++LR+ W+F G + +P V V+Y FP
Sbjct: 35 WAIQMGDYANTRYSTLD-QINKDNVKDLRVAWTFSTGVLRGHEGSPLVIGDVMYVHTPFP 93
Query: 55 SWNGYLYAVNAF-NGALIW----EQNLSKLTGLSGTGIVVNVTVA-----------VVVA 98
+ ++A++ NG ++W +Q+ + + +S + ++ A VVA
Sbjct: 94 N---RVFALDLNDNGKILWRYEPQQDPNVIAVMSCDTVYRGLSYADGMILLGQADTTVVA 150
Query: 99 VSRSNGELVWSTQI-DPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKL 157
+ ++GE+ WST+I DP +T + VG+S E + RG + L
Sbjct: 151 LDATSGEVKWSTKIGDPGIGETLTATVVPVKDKVLVGISGGEYGV--------RGRMTAL 202
Query: 158 DVRNGRIIWQTYML-PDN-------------------------GGKRGGYSGAAVWG--- 188
++ +G W+ + PD G + G +WG
Sbjct: 203 NLTDGSEAWKAWSTGPDEELLVDPETTTHLGKPIGADSSLNSWEGDQWQIGGGTIWGWFS 262
Query: 189 SSPAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYF 248
P ++++ N T P+ Q + ++ +I+A D D+G W F
Sbjct: 263 YDPDLNLVYYGTGNPSTWNPS---QRPGDNKWSMTIMARDADTGMAKW-----------F 308
Query: 249 TCLVPNNPDCPPGPNLDADFGEAPMLLTIST-NGRFRDVVVAVQKSGFAWAFDRDSGDII 307
+ P++ D D G M+LT T +G+ R ++ ++G A+ DR++G+++
Sbjct: 309 YQMTPHD-------EWDYD-GVNEMILTNQTVDGQERKLLTHFDRNGLAYTMDRETGELL 360
>gi|433639392|ref|YP_007285152.1| WD40-like repeat protein [Halovivax ruber XH-70]
gi|433291196|gb|AGB17019.1| WD40-like repeat protein [Halovivax ruber XH-70]
Length = 2834
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 92/227 (40%), Gaps = 63/227 (27%)
Query: 31 RWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTGLSGTGIVVN 90
RW++ G D+ ++P + +G VY S +G +YAV+ NG+L W+ + + V +
Sbjct: 86 RWTYPTGDDVRSSPTIVDGTVYVGSHDGNVYAVDVDNGSLEWQ--FETGDAVDSSPAVAD 143
Query: 91 VTVAV------VVAVSRSNGELVWSTQIDPRPRSQIT-MSGSVYMGAFYVGLSSLEEALP 143
TV V V A+ +G VW+ RS T + G+VY+G++
Sbjct: 144 GTVYVGSQDNSVYAIDAEDGTEVWNASTWASVRSSPTVVDGTVYVGSY------------ 191
Query: 144 ADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYSGAAVWGSSPAI--------DV 195
+ ++ LD G + W+ + G A SSPA+ D+
Sbjct: 192 ENASREHDATVYALDAETGEVEWKFF-------------GEASVRSSPAVAGGLVFVGDL 238
Query: 196 IRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGG 242
SD +++ALD D G +AW++ + G
Sbjct: 239 ---------------------SDYGEANVIALDADDGSVAWSRTVDG 264
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 69/158 (43%), Gaps = 31/158 (19%)
Query: 23 VTVRNLRLRWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTGL 82
V V N L W F G + ++PAVA+G VY S + +YA++A +G +W N S +
Sbjct: 118 VDVDNGSLEWQFETGDAVDSSPAVADGTVYVGSQDNSVYAIDAEDGTEVW--NASTWASV 175
Query: 83 SGTGIVVNVTV-------------AVVVAVSRSNGELVWSTQIDPRPRSQITMSGSVYMG 129
+ VV+ TV A V A+ GE+ W + RS ++G G
Sbjct: 176 RSSPTVVDGTVYVGSYENASREHDATVYALDAETGEVEWKFFGEASVRSSPAVAG----G 231
Query: 130 AFYVG-LSSLEEALPADQCCTFRGSLAKLDVRNGRIIW 166
+VG LS EA ++ LD +G + W
Sbjct: 232 LVFVGDLSDYGEA-----------NVIALDADDGSVAW 258
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 24/41 (58%)
Query: 25 VRNLRLRWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNA 65
V + RWSF G I ++P V +G VY S +G LYA+ A
Sbjct: 382 VEDGSERWSFETGHQIRSSPTVVDGTVYVGSRDGRLYAIGA 422
>gi|304313844|ref|YP_003848991.1| hypothetical protein MTBMA_c00680 [Methanothermobacter marburgensis
str. Marburg]
gi|302587303|gb|ADL57678.1| conserved hypothetical protein [Methanothermobacter marburgensis
str. Marburg]
Length = 401
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 66/142 (46%), Gaps = 22/142 (15%)
Query: 31 RWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIW-----EQNLSKLTGLSGT 85
+W FYAG+ + ++P V NG VYF S NG +YA++ +G W +Q +S +GT
Sbjct: 166 KWEFYAGEAVKSSPLVVNGTVYFGSCNGNVYALSESDGKEKWSYTTGDQVISSPAFWNGT 225
Query: 86 GIVVNVTVAVVVAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPAD 145
I V + A+S S+G VW + R RS + + E +L A
Sbjct: 226 -IYVGSDDGNMYALSESDGSAVWRYSLGDRVRST-------------PAIDTEENSLFA- 270
Query: 146 QCCTFRGSLAKLDVRNGRIIWQ 167
C G++ LD R G + W
Sbjct: 271 -GCD-DGNVTSLDTRTGTLKWS 290
Score = 46.2 bits (108), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 98/240 (40%), Gaps = 36/240 (15%)
Query: 20 INPVTVRNLRLRWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWE----QN 75
+ V + + WS+ G + ++PAV NG +Y S +GYLYA++ G L W+
Sbjct: 75 VYAVNLETGSVVWSYRTGGAVVSSPAVVNGTLYVGSGDGYLYAIDTDTGDLEWKFKTGNR 134
Query: 76 LSKLTGLSGTGIVVNVTVAVVVAVSRSNGELVWSTQIDPRPRSQ-ITMSGSVYMGAFYVG 134
+ +SG + V + AV +G W +S + ++G+VY G+
Sbjct: 135 IESSPAVSGGTVYVGSDDCRLYAVDADDGSKKWEFYAGEAVKSSPLVVNGTVYFGSCNGN 194
Query: 135 LSSLEEALPADQCCTFRGS--LAKLDVRNGRIIWQTYMLPDNGGKRG--GYSGAAVW--- 187
+ +L E+ ++ G ++ NG I Y+ D+G G+AVW
Sbjct: 195 VYALSESDGKEKWSYTTGDQVISSPAFWNGTI----YVGSDDGNMYALSESDGSAVWRYS 250
Query: 188 -----GSSPAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGG 242
S+PAID + + + ++ +LD +G + W+ GG
Sbjct: 251 LGDRVRSTPAIDT---------------EENSLFAGCDDGNVTSLDTRTGTLKWSFKTGG 295
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 81/203 (39%), Gaps = 30/203 (14%)
Query: 40 ISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG--LSGTGIVVNVTVAV-- 95
I ++PA+ N V Y S +G +YAVN G+++W S TG + + VVN T+ V
Sbjct: 55 IKSSPAIFNKVAYIGSVDGKVYAVNLETGSVVW----SYRTGGAVVSSPAVVNGTLYVGS 110
Query: 96 ----VVAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFR 151
+ A+ G+L W + R S +SG G YVG +D C
Sbjct: 111 GDGYLYAIDTDTGDLEWKFKTGNRIESSPAVSG----GTVYVG---------SDDC---- 153
Query: 152 GSLAKLDVRNGRIIWQTYMLPDNGGKRGGYSGAAVWGSSPAIDVIRRQKQNNQTTKPTHP 211
L +D +G W+ Y +G +GS + + T
Sbjct: 154 -RLYAVDADDGSKKWEFYAGEAVKSSPLVVNGTVYFGSCNGNVYALSESDGKEKWSYTTG 212
Query: 212 DQCISSDIYANSIVALDIDSGRI 234
DQ ISS + N + + D G +
Sbjct: 213 DQVISSPAFWNGTIYVGSDDGNM 235
>gi|392381586|ref|YP_005030783.1| methanol dehydrogenase large subunit homolog [Azospirillum
brasilense Sp245]
gi|356876551|emb|CCC97320.1| methanol dehydrogenase large subunit homolog [Azospirillum
brasilense Sp245]
Length = 597
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 82/357 (22%), Positives = 135/357 (37%), Gaps = 80/357 (22%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAG--KDISATPAVANGVVYFPS-WN 57
W+ + + RY+ + I+ TVR+L++ ++F G + A P V N +Y + +
Sbjct: 37 WVMAAKNYTSTRYSELDE-IDTNTVRDLQVSFTFSTGVVRGHEAAPLVVNDTMYVVTPYP 95
Query: 58 GYLYAVNAFNGALIWEQNLSKLTGLSGTG-----------------IVVNVTVAVVVAVS 100
LYA++ + S G I +N A VAV
Sbjct: 96 NKLYALDLTKPGAPAKWTFEPRPAASAQGVACCDYVNRGPAFADGRIFINTLDAQTVAVD 155
Query: 101 RSNGELVWSTQI-DPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDV 159
G VW T++ D +TM+ V G VG + E + RG + LD
Sbjct: 156 AETGREVWRTKLGDINKGETMTMAPLVVKGKVLVGNAGGEFGV--------RGWITALDA 207
Query: 160 RNGRIIWQTYML-PDNG---------------GKRGG----------YSGAAVWG---SS 190
G+I+W+ Y PD GK G G VWG
Sbjct: 208 GTGKIVWRAYNTGPDQDVLIGDDYKPFYDKEKGKDLGVGTWPPNAWEIGGGTVWGWISYD 267
Query: 191 PAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTC 250
P +D+I N P +P+Q + + I A + D+G+ W F
Sbjct: 268 PELDLIYHGTGN---PGPWNPEQRPGDNKWTGGIFARNPDTGQARW-----------FYQ 313
Query: 251 LVPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
VP++ D D +LL + G+ R V++ +++G+ + DR SG+++
Sbjct: 314 AVPHD-------LYDYDGINELILLDLPWQGQPRKVLIRPERNGYLYVIDRSSGEVL 363
>gi|182680534|ref|YP_001834680.1| methanol/ethanol family PQQ-dependent dehydrogenase [Beijerinckia
indica subsp. indica ATCC 9039]
gi|182636417|gb|ACB97191.1| PQQ-dependent dehydrogenase, methanol/ethanol family [Beijerinckia
indica subsp. indica ATCC 9039]
Length = 566
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 84/341 (24%), Positives = 138/341 (40%), Gaps = 67/341 (19%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAGKDI-SATPAVANG-VVYFPSWNG 58
WL + D YA + IN V NL+ W + D+ +PA+ NG ++ +
Sbjct: 46 WLMYRRDYTGSGYAPFDT-INTSNVANLKQVWDYKTDFDMGHESPAIVNGDYLFITTPKN 104
Query: 59 YLYAVNAFNGALIWEQNLSKLTGLSGTGI---VVNVTVAV-------------VVAVSRS 102
L+A A G +W LTG+ I VVN VA+ VVA+
Sbjct: 105 ELHAFQASTGKPLWVYK-HDLTGVGLKTICCDVVNRGVALYGDNVYMATLDNRVVALDAK 163
Query: 103 NGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNG 162
G+ VW+TQ++ +P M+ + + L + RG +A LD G
Sbjct: 164 TGKPVWNTQLE-KPDVGYAMTVAP------LALKGKVVVGVSGGEYGARGYIAALDASTG 216
Query: 163 RIIWQTYMLP---DNGGK---RGGYS--GAAVW--GSSPA-IDVIRRQKQNN----QTTK 207
+ +W+ + +P + GG G Y G W GS A D + N T +
Sbjct: 217 KEVWRRHTIPAPNEPGGDTWPEGAYKTGGGPAWLTGSYDADTDTLFWGVGNPGPWLATLR 276
Query: 208 PTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDAD 267
P ++Y +S++ALD +G I W + +T P D D
Sbjct: 277 P-------GDNLYTDSVLALDPATGNIKWH--------YQYT----------PNDTWDYD 311
Query: 268 FGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDIIW 308
+L+ I+ G+ +V+ ++G+ +A DR +G +I+
Sbjct: 312 GTNEQVLIDITHEGKPYKALVSASRNGWLYAIDRTNGKLIY 352
>gi|398383598|ref|ZP_10541666.1| PQQ-dependent dehydrogenase, methanol/ethanol family [Sphingobium
sp. AP49]
gi|397724614|gb|EJK85079.1| PQQ-dependent dehydrogenase, methanol/ethanol family [Sphingobium
sp. AP49]
Length = 681
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 81/349 (23%), Positives = 133/349 (38%), Gaps = 70/349 (20%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAGK-DISATPAVANGVVYFPSWNGY 59
W ++GGD + Y+ + I+ V L L WS+ D P +GV+YF
Sbjct: 35 WSSYGGDDKEQHYSALD-QISADNVGKLGLAWSYDIDTYDSYTQPLAIDGVLYFAVGLSV 93
Query: 60 LYAVNAFNGALIWEQNLSKLTGLSGT----------------GIVVNVT-VAVVVAVSRS 102
++A++A G L+W+ + ++ G++ T ++AV
Sbjct: 94 VHALDAKTGKLLWQYDPDVVSAPEAKWRMRAGWGTRGIAYKDGLIYTATREGRLIAVDAK 153
Query: 103 NGELVWSTQ-IDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRN 161
G+ WS Q +D IT V VG AD T RG + D +
Sbjct: 154 TGKPRWSVQTLDEAENGYITGPPWVAGDKIVVGFGG------ADYSPT-RGYVTAYDAKT 206
Query: 162 GRIIWQTYMLPDNGGK----RGGYSGAAVW--------GSSPAIDVIRRQKQNNQTTKPT 209
G+ W+ +++P + K R + A W G + + ++ T
Sbjct: 207 GKKAWRWFVVPGDPAKGFENRAMEAAAKTWTGEWWKFGGGGTVWHAMAYDAKYDRIYLGT 266
Query: 210 HP----DQCISS-----DIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPP 260
+Q I S ++Y SIVA+D+ +G AW Y +
Sbjct: 267 GNGWPWNQKIRSPGGGDNLYLASIVAIDVKTGEYAWH-----YQV--------------- 306
Query: 261 GPNLDADFGEAP--MLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
P DF +A L I G+ R V++ K+GF +A DR++G I
Sbjct: 307 NPENSHDFNDAMDIELADIEIGGKMRSVLMHAPKNGFFYALDRETGKFI 355
>gi|334344252|ref|YP_004552804.1| PQQ-dependent dehydrogenase methanol/ethanol family protein
[Sphingobium chlorophenolicum L-1]
gi|334100874|gb|AEG48298.1| PQQ-dependent dehydrogenase, methanol/ethanol family [Sphingobium
chlorophenolicum L-1]
Length = 692
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 84/349 (24%), Positives = 136/349 (38%), Gaps = 72/349 (20%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFY---AGKDISATPAVANGVVYFPSWN 57
W +GG N E IN V L+L W G +SA P +G++Y+ S
Sbjct: 27 WPGYGGIDENHYSPLTE--INDGNVGRLKLAWHHDIGGGGASLSA-PIAVDGILYYASGY 83
Query: 58 GYLYAVNAFNGALIWE----------QNLSKLTGLSG----TGIVVNVTV-AVVVAVSRS 102
++A++A G +W Q + G+ G G+V T+ ++A++
Sbjct: 84 SVIHALDAATGRELWTYDPQSWKGAGQKMRAAWGVRGIAYDNGMVFTGTIDGRLIAINAR 143
Query: 103 NGELVWSTQ-IDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRN 161
G VWS Q I +T + V+ G +G + A RG + D R
Sbjct: 144 TGHPVWSAQTIGKDDERYVTGAPWVFKGKVVIGHGGADFA-------PVRGYVTAYDQRT 196
Query: 162 GRIIWQTYMLPDNGGKRGGYSGAAV------W--------GSSPAIDVIRRQKQNNQ--- 204
G+ +W+ Y +P G + G+ A+ W G A + + Q N+
Sbjct: 197 GKQLWRFYTVP--GDPKLGFENKAMAMAARTWTGEWWKYGGGGTAWNAMAYDPQYNRIYI 254
Query: 205 -TTKPTHPDQCISS-----DIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDC 258
+ ++ I S +++ SIVALD D+G W Y T
Sbjct: 255 GVGNGSPWNRKIRSPGGGDNLFLCSIVALDADTGEYVW---------HYQTN-------- 297
Query: 259 PPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
PG D + L + G+ RDV++ K+GF + DR +G +I
Sbjct: 298 -PGETWDFNSAMDIELTRLKIGGKERDVLMHAPKNGFFYVIDRATGKLI 345
>gi|365885712|ref|ZP_09424699.1| Quinoprotein ethanol dehydrogenase [Bradyrhizobium sp. ORS 375]
gi|365285651|emb|CCD97230.1| Quinoprotein ethanol dehydrogenase [Bradyrhizobium sp. ORS 375]
Length = 563
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 80/343 (23%), Positives = 135/343 (39%), Gaps = 63/343 (18%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAG--KDISATPAVANGVVYFP-SWN 57
W G D N R++ + IN L L +SF + A+P V +Y SW
Sbjct: 33 WAMAGHDYGNTRFSPLKE-INTENAGKLSLVYSFSLASLRSNEASPIVIGNTLYVSTSWG 91
Query: 58 -GYLYAVNAFNGALIW--EQNL-------------SKLTGLSGTGIVVNVTVAVVVAVSR 101
Y+YA++A GA W E + S+ + + V + A+
Sbjct: 92 PKYVYALDAATGARKWTYEPEIPDDTLQYACCDVNSRGIAYADGKLFVGRLDGKLTALDA 151
Query: 102 SNGELVWSTQI-DPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVR 160
+ G+ +W++++ D + S IT V G E + RGSL D+
Sbjct: 152 ATGKELWTSKVVDYKQGSVITSPPLVVRDKVITGFGGGEYGV--------RGSLQAYDIN 203
Query: 161 NGRIIWQTYMLPDNG--------GKRGGYSGAAVW--GS-SPAIDVIRRQKQN----NQT 205
+G+++WQTY +P G G G + G A W GS P D + N N
Sbjct: 204 SGKMVWQTYTVPAPGEPGSETWKGDTGLHGGGAAWLVGSYDPKSDTVYWGTSNPGPWNTA 263
Query: 206 TKPT-HPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNL 264
+ T + D +++Y S +ALD ++G+I W + P
Sbjct: 264 VRSTGNGDFGKLTNLYTASTLALDPNTGKIKW------------------HIQTTPADAW 305
Query: 265 DADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
D D +L ++ G ++ ++GF + +R++G +I
Sbjct: 306 DYDGVNEAVLADLNVGGTAVPTLMKADRNGFFFVANRETGKVI 348
>gi|340777344|ref|ZP_08697287.1| alcohol dehydrogenase large subunit [Acetobacter aceti NBRC 14818]
Length = 743
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 74/358 (20%), Positives = 134/358 (37%), Gaps = 78/358 (21%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRW--SFYAGKDISATPAVANGVVYFPSWNG 58
WL++G + +RY+ + IN V +L+L W F + + TP + +GV+Y +
Sbjct: 56 WLSYGRTYSEQRYSPLD-QINRQNVGDLKLAWFYDFDSNRGQEGTPLIIDGVLYASTNWS 114
Query: 59 YLYAVNAFNGALIW--EQNLSKLTGLSGTGIVVNVTVAV-------------VVAVSRSN 103
+ A+ A G L+W + + + G VN +A ++A+
Sbjct: 115 KVKALKADTGELLWAFDPKVPGNVAVRGCCDTVNRGIAYWNGKIYVGTFDGRLIALDAKT 174
Query: 104 GELVWSTQIDPR-----PRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLD 158
G++VWS P+ + T+ G+ + V + + A RG ++ D
Sbjct: 175 GKVVWSVNTIPKDAALGKQRSYTVDGAPRIAKGRVIIGNGGSEFGA------RGFVSAFD 228
Query: 159 VRNGRIIWQTYMLPDNGG--------------------------KRGGYSGAAVWGS--- 189
G++ W+ + +P+ ++GG G VW S
Sbjct: 229 AETGKLDWRFFTVPNAKNEPDHAASDSVLMNKAYKTWSPTGAWTRQGG--GGTVWDSIVY 286
Query: 190 SPAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFT 249
P D++ N + I +++ SIVA+ ++G W D + +T
Sbjct: 287 DPVTDLVYLGVGNGSPWNYKYRSNGIGDNLFLGSIVAIKPETGEYVWHFQATPMDEWDYT 346
Query: 250 CLVPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
+ + M L + NG R VVV K+GF + D +G I
Sbjct: 347 SV------------------QQIMTLDLPINGETRHVVVHAPKNGFFYVLDAKTGQFI 386
>gi|410944971|ref|ZP_11376712.1| alcohol dehydrogenase [Gluconobacter frateurii NBRC 101659]
Length = 754
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 74/358 (20%), Positives = 131/358 (36%), Gaps = 78/358 (21%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFY--AGKDISATPAVANGVVYFPSWNG 58
W+++G + +RY+ + I NL+L W + + TP + +GV+Y +
Sbjct: 51 WMSYGRTYSEQRYSPLD-QITKDNASNLKLAWHYDLDTNRGQEGTPLIVDGVMYATTNWS 109
Query: 59 YLYAVNAFNGALIWEQNLSKLTGLSGTGIVVNVTVAV---------------VVAVSRSN 103
+ A++A G L+W + ++ G V ++A+
Sbjct: 110 KMKALDAATGKLLWSYDPKVPGNIADRGCCDTVNRGAAYWNGKVYFGTFDGRLIALDAKT 169
Query: 104 GELVWSTQIDPRP-----RSQITMSGS--VYMGAFYVGLSSLEEALPADQCCTFRGSLAK 156
G+LVWS P+ + T+ G+ + G VG E RG +
Sbjct: 170 GKLVWSVYTVPKEAQLGHQRSYTLDGAPRIAKGKVIVGNGGAEFGA--------RGFVTA 221
Query: 157 LDVRNGRIIWQTYMLP--DNG------------------GKRGGYS----GAAVWGS--- 189
D G++ W+ + +P DN GK G + G VW S
Sbjct: 222 YDAETGKMDWRFFTVPNPDNKPDGAASDDVLMSKAYPTWGKGGAWKQQGGGGTVWDSLIY 281
Query: 190 SPAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFT 249
P D++ N + ++++ SIVA++ D+G+ W D + +T
Sbjct: 282 DPVTDLVYLGVGNGSPWNYKFRSEGKGNNLFLGSIVAINPDTGKYVWHFQETPMDQWDYT 341
Query: 250 CLVPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
+ + M L + NG R V+V K+GF + D +G I
Sbjct: 342 SV------------------QQIMALDMPINGEMRHVLVHAPKNGFFYIIDAKTGKFI 381
>gi|334131481|ref|ZP_08505243.1| Glucose dehydrogenase [Methyloversatilis universalis FAM5]
gi|333442954|gb|EGK70919.1| Glucose dehydrogenase [Methyloversatilis universalis FAM5]
Length = 650
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/191 (21%), Positives = 75/191 (39%), Gaps = 36/191 (18%)
Query: 128 MGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYSGAAVW 187
+ +F VG S ++ P D + D+R G+ +W P G W
Sbjct: 206 LDSFAVGRSPMKSHPPGD--------IQAFDIRTGKRVWHFEQPPQEGQPGNETWEDGSW 257
Query: 188 GSSPAIDVIRRQKQNNQTTKPTHPDQCISSDIYA----------NSIVALDIDSGRIAWA 237
++ + ++ R + + P ++D Y S+VAL+ +G+IAW
Sbjct: 258 KTTGSANMWARPSCDEELGLVYLPFSTPTNDFYGGHRKGNGLFGESVVALNAKTGKIAWY 317
Query: 238 KPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAW 297
+ + + ++ D D AP L+ ++ NG+ + V K GF +
Sbjct: 318 QQIVHHGLW------------------DYDLPTAPNLMDLTVNGKKVKALAQVTKQGFVF 359
Query: 298 AFDRDSGDIIW 308
FDR +G +W
Sbjct: 360 TFDRSTGQPVW 370
>gi|440799726|gb|ELR20770.1| hypothetical protein ACA1_055360 [Acanthamoeba castellanii str.
Neff]
Length = 81
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 40/71 (56%), Gaps = 9/71 (12%)
Query: 102 SNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRN 161
++ +LVW T + P P + IT+S +V+ G VG+SS E G +A LD R+
Sbjct: 12 TDDQLVWRTMLGPHPNAVITVSATVHRGGLLVGVSSTENQF---------GPVAALDARS 62
Query: 162 GRIIWQTYMLP 172
GR+ QTYM P
Sbjct: 63 GRVAPQTYMTP 73
>gi|146338542|ref|YP_001203590.1| quinoprotein ethanol dehydrogenase [Bradyrhizobium sp. ORS 278]
gi|146191348|emb|CAL75353.1| Quinoprotein ethanol dehydrogenase [Bradyrhizobium sp. ORS 278]
Length = 563
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 81/344 (23%), Positives = 134/344 (38%), Gaps = 65/344 (18%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAG--KDISATPAVANGVVYFP-SWN 57
W G D N R++ + IN L L +SF + A+P V +Y SW
Sbjct: 33 WAMAGHDYGNTRFSPLKE-INTENAGKLSLVYSFSLASLRSNEASPIVIGNTLYVSTSWG 91
Query: 58 -GYLYAVNAFNGALIW----------------EQNLSKLTGLSGTGIVVNVTVAVVVAVS 100
Y+YA++A GA W + N +T G + V + A+
Sbjct: 92 PKYVYALDAATGARKWTYEPEIPDDTLQYACCDVNSRGITYADGK-LFVGRLDGKLTALD 150
Query: 101 RSNGELVWSTQI-DPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDV 159
+ G+ +W+ ++ D + S IT V G E + RGSL D+
Sbjct: 151 AATGKELWTAKVVDYKQGSVITSPPLVVRDKVITGFGGGEYGV--------RGSLQAYDI 202
Query: 160 RNGRIIWQTYMLPDNG--------GKRGGYSGAAVW--GS-SPAIDVIRRQKQN----NQ 204
+G+++WQTY +P G G G + G A W GS P D + N N
Sbjct: 203 NSGKMVWQTYTVPAPGEPGSETWKGDTGLHGGGAAWLVGSYDPKSDTVYWGTSNPGPWNT 262
Query: 205 TTKPT-HPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPN 263
+ T + D +++Y S +ALD ++G+I W + P
Sbjct: 263 AVRSTGNGDFGKLTNLYTASTLALDPNTGKIKW------------------HIQTTPADA 304
Query: 264 LDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
D D +L ++ G ++ ++GF + +R++G +I
Sbjct: 305 WDYDGVNEAVLADLNVGGAAVPTLMKADRNGFFFVANRETGKVI 348
>gi|182415706|ref|YP_001820772.1| Pyrrolo-quinoline quinone [Opitutus terrae PB90-1]
gi|177842920|gb|ACB77172.1| Pyrrolo-quinoline quinone [Opitutus terrae PB90-1]
Length = 423
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 73/173 (42%), Gaps = 24/173 (13%)
Query: 16 GEVLINPVTVRNLRLRWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQN 75
G+ + + R+ LRW F + A+PAV +GVVY SW+ +LYA++A NGAL W+
Sbjct: 167 GDGHVYALDARSGELRWKFATQDVVHASPAVVDGVVYVGSWDTFLYALDATNGALKWKFK 226
Query: 76 LSK------LTGLSGTGIVVNVTVAV------VVAVSRSNGELVWSTQIDPRPRSQITMS 123
+ G+ + VV V + AV G W +I +
Sbjct: 227 TGEDPENHNQEGIQSSPTVVEGVVYFGCRDFHLYAVEAQTGTQRWKHKITWINATPTVRD 286
Query: 124 GSVY----MGAFYVGLSS--------LEEALPADQCCTFRGSLAKLDVRNGRI 164
G VY + + + L + +E PA T G LA + NGR+
Sbjct: 287 GRVYASTSIPSMFFALDAQTGEEVYRVELGAPAFSSPTLAGDLAFVGSFNGRL 339
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 32/57 (56%)
Query: 31 RWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTGLSGTGI 87
+W F + +TPA+ +G YF S++G++YAV+A G L W+ + S G+
Sbjct: 78 KWKFATEGYVRSTPAIVDGTAYFGSYDGFIYAVDAATGQLRWKFETAGERKFSAKGL 134
>gi|170691803|ref|ZP_02882967.1| PQQ-dependent dehydrogenase, methanol/ethanol family [Burkholderia
graminis C4D1M]
gi|170143087|gb|EDT11251.1| PQQ-dependent dehydrogenase, methanol/ethanol family [Burkholderia
graminis C4D1M]
Length = 591
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 101/251 (40%), Gaps = 59/251 (23%)
Query: 87 IVVNVTVAVVVAVSRSNGELVWSTQIDPRPRSQIT-MSGSVYMGAFYVGLSSLEEALPAD 145
I +N A +A+ ++G+ +W T++ R + T M+ V G VG S E +
Sbjct: 139 IFINTLDAQTIALDAASGKELWRTRLGDISRGETTTMAPLVVKGKVLVGNSGGELGV--- 195
Query: 146 QCCTFRGSLAKLDVRNGRIIWQTYML-PD---------------NGGKRGGYS------- 182
RG L LD GRI+W+ Y PD + GK G S
Sbjct: 196 -----RGWLTALDAATGRIVWRAYSTGPDSDVLIGDQFKPWYGQDKGKDLGVSTWPSGAW 250
Query: 183 ---GAAVWG---SSPAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAW 236
G VWG P ++I N P +P+Q + + I A D D+G+ W
Sbjct: 251 KIGGGNVWGWISYDPDANLIYYGTAN---PGPWNPEQRPGDNKWTAGIFARDPDTGQARW 307
Query: 237 AKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFA 296
+D+ + + N +LLT++ G+ R V+V ++G+
Sbjct: 308 FYQWSPHDLHDYDGVNEN------------------VLLTLTVGGKPRQVLVHPDRNGYV 349
Query: 297 WAFDRDSGDII 307
+ DR +G+++
Sbjct: 350 YMLDRLTGEVL 360
>gi|387886338|ref|YP_006316637.1| Pyrrolo-quinoline quinone repeat protein [Francisella noatunensis
subsp. orientalis str. Toba 04]
gi|386871154|gb|AFJ43161.1| Pyrrolo-quinoline quinone repeat protein [Francisella noatunensis
subsp. orientalis str. Toba 04]
Length = 519
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 94/261 (36%), Gaps = 66/261 (25%)
Query: 22 PVTVRNLRLRWSFYAGKDIS------ATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQN 75
P ++++WS G S +PA AN +V+ P+ NG Y + NG +IW+ +
Sbjct: 35 PPKEAKVKVKWSRSTGNGNSGLPIYNVSPAYANDMVFVPNQNGMAYGLAITNGKIIWKHD 94
Query: 76 ----LSKLTGLSGTGIVVNVTVAVVVAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAF 131
LS ++ + AV + +G+++W T S I ++Y
Sbjct: 95 TGTTLSSQPSTIANAVIFGSIKGALTAVDQKDGQILWRTD----ALSSIFSQPTIYSNHL 150
Query: 132 YVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQT------YMLP------------- 172
Y T GS+ D NG +W LP
Sbjct: 151 Y--------------THTHDGSVTSFDATNGSKVWNVTNNIPEITLPSDSSPIILNDTVM 196
Query: 173 -------------DNGGKRGGYSGAAVWGSSPAIDVIRRQKQNNQTTKPTHPDQCISSDI 219
D+G + A GSSPA K + T+ P +
Sbjct: 197 VGSAFGTVLGFTLDSGDRTINLPIAIAHGSSPA------DKMVDITSNPMLYGNYLIFAA 250
Query: 220 YANSIVALDIDSGRIAWAKPL 240
Y +IVALD D+G++ WAK +
Sbjct: 251 YQGAIVALDKDTGKMLWAKKV 271
>gi|405959728|gb|EKC25732.1| Acyl-CoA synthetase family member 4 [Crassostrea gigas]
Length = 2177
Score = 53.9 bits (128), Expect = 1e-04, Method: Composition-based stats.
Identities = 46/175 (26%), Positives = 78/175 (44%), Gaps = 38/175 (21%)
Query: 31 RWSFYAGKDISATPAV---ANGV--VYFPSWNGYLYAVNAFNGALIWEQNL------SKL 79
RWSF GK + A+P V ++G+ V+ S + ++YA+ A GAL+W+ L S
Sbjct: 676 RWSFDTGKCVDASPLVIQASSGLHEVFIGSHSHHMYALVAETGALLWKTKLGDRIESSAC 735
Query: 80 TGLSGTGIVVNVTVAVVVAVSRSNGELVWSTQIDPRPRSQIT---MSGSVYMGAFYVGLS 136
L G I+V V ++R G+++W + +S ++G +Y+G+ +
Sbjct: 736 VSLCGKYIIVGCYDGGVYTLARDTGDIIWMYRTKSSVKSSPAVDPITGWIYIGSHDHHVY 795
Query: 137 SLE--------------------EALPADQ----CCTFRGSLAKLDVRNGRIIWQ 167
SL+ AL D C+ G +A L ++G IIW+
Sbjct: 796 SLDIENQVCCWRVQIDEGSVFSSPALSYDNHYVCVCSLSGHVAALHPKSGEIIWK 850
>gi|409402329|ref|ZP_11251903.1| putative quinoprotein ethanol dehydrogenase [Acidocella sp.
MX-AZ02]
gi|409129068|gb|EKM98938.1| putative quinoprotein ethanol dehydrogenase [Acidocella sp.
MX-AZ02]
Length = 575
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 66/300 (22%), Positives = 115/300 (38%), Gaps = 64/300 (21%)
Query: 40 ISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG---------------LSG 84
+P + ++ + ++ A NA G +WE + T LSG
Sbjct: 96 FEGSPVINGDYMFVTTAKDHVIAYNATTGQKLWEYDYQLPTAAFKTLCCDTNNRGVALSG 155
Query: 85 TGIVVNVTVAVVVAVSRSNGELVWSTQI-DPRPRSQITMSGSVYMGAFYVGLSSLEEALP 143
++ VVA+ + G + W+ + +P IT + + G +G E
Sbjct: 156 DMVIFGTLDNHVVALDAATGAVKWNVTLKEPGTGYSITEAPLIVNGKVIIGTGGGEYGA- 214
Query: 144 ADQCCTFRGSLAKLDVRNGRIIWQTYMLP---DNGGKR---GGYS--GAAVWGS---SPA 192
RG + LDV G +W+ Y P + GGK G Y G + W + P+
Sbjct: 215 -------RGRIVALDVNTGNELWKFYTTPSEDEPGGKTWPAGAYKTGGGSPWMTGTYDPS 267
Query: 193 IDVIRRQKQNN----QTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYF 248
D + N T +P ++Y +S+VALD ++G++ W + F
Sbjct: 268 TDTLFWGVGNPGPWLATMRP-------GDNLYTDSLVALDPNTGKLKW--------YYQF 312
Query: 249 TCLVPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDIIW 308
T P D D P+L ++ G+ V+ ++G+ +A DR +G I+
Sbjct: 313 T----------PNDTWDYDGVNTPVLTDLTYKGKQYQAVIQPNRNGYLYALDRTTGKFIY 362
>gi|387130353|ref|YP_006293243.1| Methanol dehydrogenase large subunit protein [Methylophaga sp.
JAM7]
gi|386271642|gb|AFJ02556.1| Methanol dehydrogenase large subunit protein [Methylophaga sp.
JAM7]
Length = 592
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 81/357 (22%), Positives = 139/357 (38%), Gaps = 81/357 (22%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAG--KDISATPAVANGVVY----FP 54
W+ G+ N RY+ IN V++L + WSF G + V +G +Y FP
Sbjct: 34 WVMPAGNYANHRYST-LTQINKENVKDLNMAWSFSTGVLRGHEGNALVMDGTMYVHTPFP 92
Query: 55 SWNGYLYAVNAFN-GALIWE----QNLSKLT----------GLS--GTGIVVNVTVAVVV 97
+ ++A++ N GA+ W+ QN + GLS I +N +V
Sbjct: 93 N---IVFALDLNNDGAIKWKYEPSQNYDETVPVMCCDTVNRGLSYADGKIFLNQADTTLV 149
Query: 98 AVSRSNGELVWSTQ-IDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAK 156
A+ GE VWS + DP+ + T + V+ VG+S E + RG +
Sbjct: 150 ALDMETGEQVWSDKRDDPKVGATSTAAAHVFDDKIIVGISGGEFGV--------RGYVQA 201
Query: 157 LDVRNGRIIWQTY-------ML--PDN-----------------GGKRGGYSGAAVWGSS 190
D+ +G ++++ Y ML P+N G + G WG
Sbjct: 202 YDL-DGNVVYKAYSTGPDDEMLVDPENTLSMLKPVGKDSSLKSWQGDQWKIGGGTTWGWY 260
Query: 191 PAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTC 250
+ + N +P Q + + S+ D+D+G W + YD + +
Sbjct: 261 SYDPDLNQFYYGNGNPSTWNPVQRPGDNKWTMSMWGRDLDTGMAKWVYQMTPYDEWDYDG 320
Query: 251 LVPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
+ N +L+ NG+ R VV ++GFA+ DR +G+++
Sbjct: 321 VNEN------------------ILVDQKVNGKMRKTVVHFDRNGFAYTLDRVNGELL 359
>gi|33338429|gb|AAQ13836.1|U26263_1 sorbitol dehydrogenase precursor [Gluconobacter oxydans]
Length = 754
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 70/358 (19%), Positives = 129/358 (36%), Gaps = 78/358 (21%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFY--AGKDISATPAVANGVVYFPSWNG 58
W+++G + +RY+ + I NL+L W + + TP + +GV+Y +
Sbjct: 51 WMSYGRTYSEQRYSPLD-QITKDNASNLKLAWHYDLDTNRGQEGTPLIVDGVMYATTNWS 109
Query: 59 YLYAVNAFNGALIWEQNLSKLTGLSGTGIVVNVTVAV---------------VVAVSRSN 103
+ A++A G L+W + ++ G V ++A+
Sbjct: 110 KMKALDAATGKLLWSYDPKVPGNIADRGCCDTVNRGAAYWNGKVYFGTFDGRLIALDAKT 169
Query: 104 GELVWSTQIDPRP-----RSQITMSGS--VYMGAFYVGLSSLEEALPADQCCTFRGSLAK 156
G+LVWS P+ + T+ G+ + G +G E RG +
Sbjct: 170 GKLVWSVYTVPKEAQLGHQRSYTVDGAPRIAKGKVIIGNGGAEFGA--------RGFVTA 221
Query: 157 LDVRNGRIIWQTYMLPDNGGKRGGYS------------------------GAAVWGS--- 189
D G++ W+ + +P+ K G + G VW S
Sbjct: 222 YDAETGKMDWRFFTVPNPDNKPDGAASDDVLMSKAYPTWGKGGAWKQQGGGGTVWDSLIY 281
Query: 190 SPAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFT 249
P D++ N + ++++ SIVA++ D+G+ W D + +T
Sbjct: 282 DPVTDLVYLGVGNGSPWNYKFRSEGKGNNLFLGSIVAINPDTGKYVWHFQETPMDQWDYT 341
Query: 250 CLVPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
+ + M L + NG R V+V K+GF + D +G I
Sbjct: 342 SV------------------QQIMALDMPVNGEMRHVLVHAPKNGFFYIIDAKTGKFI 381
>gi|365886117|ref|ZP_09425081.1| putative Quinoprotein ethanol dehydrogenase [Bradyrhizobium sp. STM
3809]
gi|365338396|emb|CCD97612.1| putative Quinoprotein ethanol dehydrogenase [Bradyrhizobium sp. STM
3809]
Length = 554
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 75/332 (22%), Positives = 129/332 (38%), Gaps = 54/332 (16%)
Query: 2 LNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAGKDIS--ATPAVANGVVYFPSWNGY 59
LN+G N +R++ IN +NL W++ D S + P V GV+Y + N
Sbjct: 37 LNYGMGYNLQRFS-PLTQINKDNAKNLVPVWNYSFADDRSEESQPLVYQGVLYVTTHNAT 95
Query: 60 LYAVNAFNGALIWEQNLS---------------KLTGLSGTGIVVNVTVAVVVAVSRSNG 104
+ AV+A G IW+ + + L + A V+A+ G
Sbjct: 96 M-AVDAKTGKQIWKSKIEYPAETPRVVCCGIINRGAALYDGKVFRTTLDANVIALDAKTG 154
Query: 105 ELVWSTQI-DPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGR 163
+ +W + D + +T++ V G G+S E RG + D G+
Sbjct: 155 KELWRQKAADIKEGYSMTVAPLVADGVVLTGISGAEFGT--------RGFIDGWDPATGK 206
Query: 164 IIWQTYMLPDNGGKRGGYSGAAVW---GSSPAIDVIRRQKQNN-----QTTKPTHPDQCI 215
+W+T+ +P G W G S I +QN P +
Sbjct: 207 HLWRTHTVPTPDEPGGDTWKGDTWKLGGGSTWITGSYDPEQNTVFWGVGNPGPFNAAVRP 266
Query: 216 SSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLL 275
++Y S++ALD +G++ W F F+ PNNP D D +L
Sbjct: 267 GDNLYTCSVLALDPKTGKMKWH--------FQFS---PNNP-------FDYDAVAEMVLA 308
Query: 276 TISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
++ G+ V++ ++GF + DR +G ++
Sbjct: 309 DMNVEGKPTKVLMNANRNGFFYVLDRTNGKLL 340
>gi|414342059|ref|YP_006983580.1| NADP-dependent sorbitol dehydrogenase [Gluconobacter oxydans H24]
gi|411027394|gb|AFW00649.1| NADP-dependent sorbitol dehydrogenase [Gluconobacter oxydans H24]
gi|453330078|dbj|GAC87801.1| PQQ-dependent alcohol dehydrogenase, large subunit [Gluconobacter
thailandicus NBRC 3255]
Length = 773
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 70/358 (19%), Positives = 129/358 (36%), Gaps = 78/358 (21%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFY--AGKDISATPAVANGVVYFPSWNG 58
W+++G + +RY+ + I NL+L W + + TP + +GV+Y +
Sbjct: 70 WMSYGRTYSEQRYSPLD-QITKDNASNLKLAWHYDLDTNRGQEGTPLIVDGVMYATTNWS 128
Query: 59 YLYAVNAFNGALIWEQNLSKLTGLSGTGIVVNVTVAV---------------VVAVSRSN 103
+ A++A G L+W + ++ G V ++A+
Sbjct: 129 KMKALDAATGKLLWSYDPKVPGNIADRGCCDTVNRGAAYWNGKVYFGTFDGRLIALDAKT 188
Query: 104 GELVWSTQIDPRP-----RSQITMSGS--VYMGAFYVGLSSLEEALPADQCCTFRGSLAK 156
G+LVWS P+ + T+ G+ + G +G E RG +
Sbjct: 189 GKLVWSVYTVPKEAQLGHQRSYTVDGAPRIAKGKVIIGNGGAEFGA--------RGFVTA 240
Query: 157 LDVRNGRIIWQTYMLPDNGGKRGGYS------------------------GAAVWGS--- 189
D G++ W+ + +P+ K G + G VW S
Sbjct: 241 YDAETGKMDWRFFTVPNPDNKPDGAASDDVLMSKAYPTWGKGGAWKQQGGGGTVWDSLIY 300
Query: 190 SPAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFT 249
P D++ N + ++++ SIVA++ D+G+ W D + +T
Sbjct: 301 DPVTDLVYLGVGNGSPWNYKFRSEGKGNNLFLGSIVAINPDTGKYVWHFQETPMDQWDYT 360
Query: 250 CLVPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
+ + M L + NG R V+V K+GF + D +G I
Sbjct: 361 SV------------------QQIMALDMPVNGEMRHVLVHAPKNGFFYIIDAKTGKFI 400
>gi|398355246|ref|YP_006400710.1| dehydrogenase XoxF [Sinorhizobium fredii USDA 257]
gi|390130572|gb|AFL53953.1| putative dehydrogenase XoxF [Sinorhizobium fredii USDA 257]
Length = 634
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 78/369 (21%), Positives = 143/369 (38%), Gaps = 87/369 (23%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAG--KDISATPAVANGVVY----FP 54
W GD N RY+ + IN V++L+++W+F G + P V V+Y FP
Sbjct: 42 WAMPTGDYANTRYSKLK-QINKDNVKDLQVKWTFSTGVLRGHEGGPLVIGDVMYVHTPFP 100
Query: 55 SWNGYLYAVNAFN-GALIWE---------------QNLSKLTGLSGTGIVVNVTVAVVVA 98
+ +YA++ N G ++W+ +++ I++ V A
Sbjct: 101 N---IVYALDLKNEGKMLWKYEPRQDPNVIAIMCCDTVNRGPAYGDGKIILYQADTTVTA 157
Query: 99 VSRSNGELVWSTQIDPRPRSQITMSGS----VYMGAFYVGLSSLEEALPADQCCTFRGSL 154
+ G++ W + ++ SG+ V VG+S E + RG +
Sbjct: 158 LDAKTGKVAWQVLNGEKKDGSLSESGTSAPMVVKDKVIVGISGAEYGV--------RGHI 209
Query: 155 AKLDVRNGRIIWQTYML-PDNG---------------GKRGGYS----------GAAVWG 188
++ +G+ W+ Y PD+ GK G + G WG
Sbjct: 210 TAYNLSDGKRAWRAYSTGPDSETLIDPEKTTHLGKPVGKDSGMNTWEGEQWKTGGGTTWG 269
Query: 189 ---SSPAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDI 245
P ++VI N T +P+Q + ++ +I A D D+G WA + +D
Sbjct: 270 WYSYDPELNVIYYGTGNPSTW---NPNQRPGDNRWSMTIFARDADTGMAKWAYQMTPHDE 326
Query: 246 FYFTCLVPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGD 305
+ + + E ++ + G+ RDV+V ++GFA+ DR +G+
Sbjct: 327 WDYDGV-----------------NEMILVDDMDIKGQPRDVLVHFDRNGFAYTLDRATGE 369
Query: 306 IIWFKLAGP 314
++ K P
Sbjct: 370 LLVAKKYDP 378
>gi|372271941|ref|ZP_09507989.1| methanol/ethanol family PQQ-dependent dehydrogenase
[Marinobacterium stanieri S30]
Length = 588
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 74/336 (22%), Positives = 130/336 (38%), Gaps = 80/336 (23%)
Query: 20 INPVTVRNLRLRWSFYAG----KDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQN 75
+N TV+ LR WSF G + + P V +GV+Y ++A++A G +WE N
Sbjct: 62 LNTETVKELRPVWSFSFGGEKQRGQESQPMVKDGVMYVTGSYSRVFAIDAKTGDELWEYN 121
Query: 76 -------------LSKLTGLSGTGIVVNVTVAVVVAVSRSNGELVWSTQI-DPRPRSQIT 121
+++ L G ++ A +VA+++ G++VW ++ D + +T
Sbjct: 122 ARLPDGIMPCCDVINRGVALYGDLVIFGTLDAKLVALNKDTGKVVWKKKVADYKEGYSLT 181
Query: 122 MSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQT--------YMLPD 173
+ V G G+S E + G + D G I+W Y+ D
Sbjct: 182 AAPLVVKGKIITGVSGGEFGV--------VGKVEAYDAVTGDIVWTRPTVEGHMGYIWKD 233
Query: 174 --------NGGKRG--------GYSGAAVW---GSSPAIDVIRRQKQNNQTTKPTHPDQC 214
+GGK G GAA W P D++ N P +
Sbjct: 234 GKKVENGISGGKPGETWPGDLWKTGGAATWLGGTYDPETDLMFFGTGN---PAPWNSHLR 290
Query: 215 ISSDIYANSIVALDIDSGRIAW---AKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEA 271
+++++S +A+D D+G+I W P G+D L+ + D + G
Sbjct: 291 PGDNLFSSSRLAIDPDTGKIVWHFQTTPHDGWDFDGVNELI----------SFDYEDG-- 338
Query: 272 PMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
G+ ++GF + +R++GD I
Sbjct: 339 ---------GKTVKAAATADRNGFFYVLNRENGDFI 365
>gi|406981092|gb|EKE02612.1| PQQ repeat protein [uncultured bacterium]
Length = 371
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 56/107 (52%), Gaps = 5/107 (4%)
Query: 30 LRWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG----LSGT 85
L+W+F AG+ I+++PAV NG V+F S NG +YAVNA G IW + +SG
Sbjct: 56 LKWTFDAGEQINSSPAVYNGKVFFGSDNGNIYAVNAETGKEIWSIKTDNIVDSSPVISGG 115
Query: 86 GIVVNVTVAVVVAVSRSNGELVWSTQIDPRPRSQITMSGS-VYMGAF 131
+ + + A+ G + W+ + + R S + G VY G++
Sbjct: 116 IVYIGGRDSKFYAIDAETGSIKWTFEAENRISSSPVIYGDYVYFGSW 162
Score = 41.6 bits (96), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 53/107 (49%), Gaps = 5/107 (4%)
Query: 30 LRWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIW----EQNLSKLTGLSGT 85
++W+F A IS++P + VYF SW+ +YAVN +G + W + + ++
Sbjct: 136 IKWTFEAENRISSSPVIYGDYVYFGSWDKNVYAVNRTDGTIAWKYATQARIMSSPAINNN 195
Query: 86 GIVVNVTVAVVVAVSRSNGELVWSTQIDPRPRSQITMSG-SVYMGAF 131
+ + A + A+ +G+L W S +SG +VY+G++
Sbjct: 196 IVYIGSHDANLYAIDAKSGKLKWKYPTKRFIISAPAVSGNNVYIGSW 242
Score = 38.9 bits (89), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 32/61 (52%)
Query: 23 VTVRNLRLRWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTGL 82
+ ++ +L+W + + I + PAV+ VY SW+ +YA+N G+L W + G
Sbjct: 209 IDAKSGKLKWKYPTKRFIISAPAVSGNNVYIGSWDKNVYAINKLTGSLKWRCATQETVGR 268
Query: 83 S 83
S
Sbjct: 269 S 269
>gi|386021613|ref|YP_005939637.1| alcohol dehydrogenase [Pseudomonas stutzeri DSM 4166]
gi|327481585|gb|AEA84895.1| alcohol dehydrogenase [Pseudomonas stutzeri DSM 4166]
Length = 710
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 80/355 (22%), Positives = 133/355 (37%), Gaps = 80/355 (22%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYA----GKDISATPAVANGVVYFPSW 56
WL +G + +R++ + IN V L+ W YA D+ TP V +GV+Y+
Sbjct: 45 WLAYGRTHSEQRFSPLKD-INVDNVSQLKPEW--YAPLPDRSDMVGTPLVVDGVMYYVGE 101
Query: 57 NGYLYAVNAFNGALIWE-----------QNLSKL-----TGLS--GTGIVVNVTVAVVVA 98
A +A G +WE N+ K+ GLS G + + ++A
Sbjct: 102 MNRTRAFDARTGKKLWEYDPQVSKEILDNNMKKVFWKHNRGLSTYGDKLFIATWDGRLIA 161
Query: 99 VSRSNGELVWSTQ-IDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKL 157
++R +G+ VW T+ D IT + G +VG E RG +
Sbjct: 162 INRKDGKEVWQTRTFDHDQPLNITGHPKAFDGKVFVGNGGTE-------LGPMRGYVTAY 214
Query: 158 DVRNGRIIWQTYMLPDNGGKRGGYSGAA------VW--------GSSPAIDVIRRQKQNN 203
D G+ +W+ Y++P G G+ AA W G A + N
Sbjct: 215 DAETGKQVWRFYIVP--GNPADGFEDAAQEMAAKTWSGRWWENGGGGNAWHGWTYDAKYN 272
Query: 204 Q-----------TTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLV 252
Q K P+ +++ S+VA+D D+G W
Sbjct: 273 QLIFGTGNGGPWNIKVRSPEG--GDNLFLCSVVAVDADTGEYKW---------------- 314
Query: 253 PNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
+ PG D + +L + +G+ D V+ K+GF + DR +G ++
Sbjct: 315 --HVQTAPGDTWDYNSNMDIVLADLKIDGKDVDAVLHAPKNGFFYTIDRSNGKVL 367
>gi|119382777|ref|YP_913833.1| Pyrrolo-quinoline quinone [Paracoccus denitrificans PD1222]
gi|119372544|gb|ABL68137.1| Pyrrolo-quinoline quinone [Paracoccus denitrificans PD1222]
Length = 600
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 82/364 (22%), Positives = 146/364 (40%), Gaps = 95/364 (26%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAG--KDISATPAVANGVVY----FP 54
W GD N RY+ + IN V++LR+ W+F G + +P V V+Y FP
Sbjct: 35 WAIQMGDYANTRYSTLD-QINKDNVKDLRVAWTFSTGVLRGHEGSPLVIGDVMYVHTPFP 93
Query: 55 SWNGYLYAVNA-FNGALIWE-------------------QNLSKLTGLSGTGIVVNVTVA 94
+ ++A++ NG ++W + LS G+ I++
Sbjct: 94 N---RVFALDLNDNGKILWRYEPQQDPNVIAVMCCDTVYRGLSYADGM----ILLGQADT 146
Query: 95 VVVAVSRSNGELVWSTQI-DPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGS 153
VVA+ ++GE+ WST+I DP +T + VG+S E + RG
Sbjct: 147 TVVALDATSGEVKWSTKIGDPGIGETLTATVVPVKDKVLVGISGGEYGV--------RGR 198
Query: 154 LAKLDVRNGRIIWQTYML-PDN-------------------------GGKRGGYSGAAVW 187
+ L++ +G W+ + PD G + G +W
Sbjct: 199 MTALNLTDGSEAWKAWSTGPDEELLVDPETTTHLGKPIGADSSLNSWEGDQWQIGGGTIW 258
Query: 188 G---SSPAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYD 244
G P ++++ N T P+ Q + ++ +I+A D D+G W
Sbjct: 259 GWFSYDPDLNLVYYGTGNPSTWNPS---QRPGDNKWSMTIMARDADTGMAKW-------- 307
Query: 245 IFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTIST-NGRFRDVVVAVQKSGFAWAFDRDS 303
F + P++ D D G M+LT T +G+ R ++ ++G A+ DR++
Sbjct: 308 ---FYQMTPHD-------EWDYD-GVNEMILTNQTVDGQERKLLTHFDRNGLAYTMDRET 356
Query: 304 GDII 307
G+++
Sbjct: 357 GELL 360
>gi|387130009|ref|YP_006292899.1| glucose dehydrogenase, PQQ-dependent [Methylophaga sp. JAM7]
gi|386271298|gb|AFJ02212.1| Glucose dehydrogenase, PQQ-dependent [Methylophaga sp. JAM7]
Length = 581
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 84/392 (21%), Positives = 143/392 (36%), Gaps = 106/392 (27%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAG--KDISATPAVANGVVYFPSWNG 58
W +GGD+ + R++ + ++PV VR LR W+F +G ATP V +GV+Y
Sbjct: 26 WPIYGGDIYHHRHSPA-IQVDPVNVRALRPAWTFDSGISAAFQATPVVVDGVMYLSLPYN 84
Query: 59 YLYAVNAFNGALIW--EQNL----SKLTGLSGTGIVV-------NVTVAVVVAVSRSNGE 105
++ A++A NG +W E L G + G+ V A ++A+ +G
Sbjct: 85 HVVALDATNGKQLWRYEHQLVADHQSCCGPANRGVAVADGKVFMGTIDARLIALDADDGS 144
Query: 106 LVWSTQIDPRPRS---------------------QITMSGSVYMGAFYVGLSSLEEALPA 144
++W + R I M+ +Y G +G++ + L
Sbjct: 145 VIWDRDVVGENRGIQEETDGIGEQFGEATGTSGVGINMAPVIYDGKVIIGITGVGYGLHL 204
Query: 145 DQCCT---------------FRGSLAKLDVRNGRIIWQTYM------------------- 170
D G LA D+ NG+ +WQ
Sbjct: 205 DAPDADAPLGAVVGIAGEYGRMGFLAAFDMNNGKKVWQFDTIRHKNWQGEFTAVTEDGVN 264
Query: 171 LPDNGGKRGG----------YSGAAVWGSSPAIDVIRRQKQNNQTTKPTHPDQCISS--- 217
LP + Y G + W S+P ID + + T P SS
Sbjct: 265 LPRDIATEKATLADHQDAWRYGGGSAW-STPVID--KHTGILHFGTGNPSPQMEGSSRPG 321
Query: 218 -DIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLT 276
++Y +S++A+D +G W VP++ N D P+L
Sbjct: 322 DNLYTSSLLAVDASTGAYRW-----------HYQQVPHD-------NWGYDVASPPVLFN 363
Query: 277 ISTNGRFRDVVVAVQKSGFAWAFDRDSGDIIW 308
I+ NG+ + K+G+ + DR +G ++
Sbjct: 364 ITVNGQPVPAIGQAGKTGWFYVHDRRNGRFLY 395
>gi|312130519|ref|YP_003997859.1| quinoprotein glucose dehydrogenase [Leadbetterella byssophila DSM
17132]
gi|311907065|gb|ADQ17506.1| Quinoprotein glucose dehydrogenase [Leadbetterella byssophila DSM
17132]
Length = 698
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 76/336 (22%), Positives = 129/336 (38%), Gaps = 76/336 (22%)
Query: 20 INPVTVRNLRLRWSFYA--GKDISATPAVANGVVYFPSWNGYLYAVNA------------ 65
INP V+NL++ W ++ I P + NG +Y + + L+A+NA
Sbjct: 43 INPENVKNLQVAWEYHTLDTGQIQCNPIIVNGKMYGVTASNGLFAINAETGEELWKFWGG 102
Query: 66 -----FN---GALIWEQNLS----KLTGLSGTGI-VVNVTVAVVVAVSRSNGELVWSTQI 112
FN G WE S ++ G + VN ++ +G++ + +
Sbjct: 103 KEKSFFNTNRGVTYWEDKKSGEPARILYCFGEWLYAVNAETGEKISSFGDDGKVSLKSGL 162
Query: 113 DPRPRSQITMS---GSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTY 169
+ + +S G+++ + L E A A G + +V G + W +
Sbjct: 163 GDNAKDKFVISTTPGTLFEDKIIMPLRVSEGADAAP------GYIQAFNVITGNLDWVFH 216
Query: 170 MLPDNG----------GKRGGYSGAAVWGSSPAIDVIRRQKQNNQTTKPT-------HPD 212
+P G R GAA S AID ++ PT +
Sbjct: 217 TIPHPGEFGYDTWPKDAYRNEEIGAANNWSGMAID-----RKRGLLFVPTGSAGFDFYGG 271
Query: 213 QCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAP 272
+++AN ++ALD +G+ W +D++ D D P
Sbjct: 272 NREGENLFANCLIALDAKTGQRKWHFQTVHHDLW------------------DRDLPAPP 313
Query: 273 MLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDIIW 308
LLTI +G+ DVV V KSGF + F+R++G I+
Sbjct: 314 NLLTIRKDGKKIDVVAQVTKSGFVFVFERETGKPIF 349
>gi|239816015|ref|YP_002944925.1| PQQ-dependent dehydrogenase [Variovorax paradoxus S110]
gi|239802592|gb|ACS19659.1| PQQ-dependent dehydrogenase, methanol/ethanol family [Variovorax
paradoxus S110]
Length = 608
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 69/362 (19%), Positives = 141/362 (38%), Gaps = 88/362 (24%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRN---LRLRWSFYAG--KDISATPAVANGVVYFPS 55
W GD+ N+RY+ +N +T N +++ W+F G + +P V +GV+Y S
Sbjct: 42 WATQAGDMFNQRYS----KLNQITKSNVGKMQVAWTFSTGVLRGHEGSPLVVDGVMYLHS 97
Query: 56 -WNGYLYAVNAFNGALIWE---------------QNLSKLTGLSGTGIVVNVTVAVVVAV 99
+ ++A++ ++W+ +++ + + + +VA+
Sbjct: 98 PFPNKVFALDVETQKILWKYEPKQDQSVIAVMCCDTVNRGLAYAEGKVFLQQADTTLVAL 157
Query: 100 SRSNGELVWSTQI-DPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLD 158
G++VW+ + DP+ + T + V+ G+S E + RG LA +
Sbjct: 158 DSKTGKVVWTVKNGDPKVGATNTNAPHVFKDKVITGISGGEFGV--------RGFLAAYN 209
Query: 159 VRNGRIIWQTY-------MLPDNG-----------------------GKRGGYSGAAVWG 188
+++G++ W+ + ML D G + G WG
Sbjct: 210 IKDGKLAWKGFSTGPDEEMLMDPAKTMTWTDGKMAPVGKDSSLKTWKGDQWKIGGGTTWG 269
Query: 189 ---SSPAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDI 245
A + + N T P+ Q + ++ SI + D+D+G++ W + YD
Sbjct: 270 WYSYDKATNAVYYGTGNPSTWNPS---QRPGDNKWSMSIWSRDVDTGKVNWVYQMTPYDE 326
Query: 246 FYFTCLVPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGD 305
+ F + +L I+ G+ +V ++GFA+ DR +G
Sbjct: 327 WDFDGI------------------NEMILADINVKGKPTKALVHFDRNGFAYTLDRVTGA 368
Query: 306 II 307
++
Sbjct: 369 LL 370
>gi|448322431|ref|ZP_21511901.1| PQQ-dependent enzyme-like protein [Natronococcus amylolyticus DSM
10524]
gi|445601189|gb|ELY55178.1| PQQ-dependent enzyme-like protein [Natronococcus amylolyticus DSM
10524]
Length = 572
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 73/330 (22%), Positives = 125/330 (37%), Gaps = 48/330 (14%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFY--AGKDISATPAVANG---VVYFPS 55
WL +GG+ R +V I P V +L + + AG + TP + G ++Y +
Sbjct: 63 WLTYGGNYEQHRRTTADV-ITPDNVADLEVEYMLDVGAGSSMEGTPLIVPGDPPIMYQSN 121
Query: 56 WNGYLYAVNAFNGALIWE-------------QNLSKLTGLSGTGIVVNVTVAVVVAVSRS 102
++ A++A G ++W + ++ G + + + VVA+ R
Sbjct: 122 GPNHVKAIDAREGDILWSYTYAVPSDVVLCCDDNNRGVAAYGDKVFMTTLDSGVVALDRY 181
Query: 103 NGELVWSTQI-DPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRN 161
GE W T D T + + G + G + E + RG LD
Sbjct: 182 TGEEEWYTSTADHEEGYSATWAPVAFDGMIFTGSAGGEYGV--------RGFHTALDAET 233
Query: 162 GRIIWQTYMLPDNG--GKRGGYSGAAVWGSSPAIDVIRRQKQNNQTTKPTHPDQCISSDI 219
G +W T+ P+ G S A W ++ IDV R+ D +
Sbjct: 234 GEEVWHTWTSPETEWVGDSINQSCATNWMNA-TIDVEERRLYLPIGNPGPDFDGSVRPGP 292
Query: 220 YANS--IVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTI 277
NS +ALD+D+G W +D++ + P L D + I
Sbjct: 293 NRNSCGTLALDMDTGERLWTHQEVAHDVWDYDSAAPRI--------LIRD-------MEI 337
Query: 278 STNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
+DVVV+ K+G+ + D +G++I
Sbjct: 338 EHRNTTKDVVVSAGKTGWVYTMDTGTGELI 367
>gi|119504581|ref|ZP_01626660.1| putative alcohol dehydrogenase precursor [marine gamma
proteobacterium HTCC2080]
gi|119459603|gb|EAW40699.1| putative alcohol dehydrogenase precursor [marine gamma
proteobacterium HTCC2080]
Length = 687
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 82/320 (25%), Positives = 122/320 (38%), Gaps = 63/320 (19%)
Query: 19 LINPVTVRNLRLRWSFYAGK-DISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNL- 76
+IN V+ L L WS + TP V NG+++ N + A+NA +G LIWE
Sbjct: 184 IINRSNVQRLGLSWSIAMHRGSNQGTPLVRNGIMFLTHPNNKIQAINAASGDLIWEYQYA 243
Query: 77 ----SKLTGLSGTGIVVNVTV-----------AVVVAVSRSNGELVW-STQIDPRPRSQI 120
S+L G G N+ + A VVA+ +G+ +W S + D R
Sbjct: 244 FPEGSRLLG----GPTRNIAIYEDRLFLATYDAAVVAIDARSGQQLWRSEKADYREAFTH 299
Query: 121 TMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNGG---- 176
+ + G G++ E L D C G D G +W+T L G
Sbjct: 300 SAGPIIADGIVVSGINGCE--LFTDDGCFITGH----DPATGAELWRTSTLALPGSPEFE 353
Query: 177 --------KRGGYSGAAVWGSSPAID-VIRRQKQNNQTTKPTHPDQCISSDIYANSIVAL 227
+RGG ++ VI Q + + +Y NS +A+
Sbjct: 354 SWGEIAADRRGGGDMWIAGSYDAELELVIIGTSQPKPWAAVSRGMSTGDAALYTNSTLAI 413
Query: 228 DIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVV 287
D +G I W YF + PG +D + G +L T T+G VV
Sbjct: 414 DPKTGEIDW----------YFQHI--------PGETIDMEVGFERILTT--TDGV--PVV 451
Query: 288 VAVQKSGFAWAFDRDSGDII 307
+ V K G W DR +G+ I
Sbjct: 452 MTVGKDGILWKLDRRTGEYI 471
>gi|148257224|ref|YP_001241809.1| quinoprotein ethanol dehydrogenase [Bradyrhizobium sp. BTAi1]
gi|146409397|gb|ABQ37903.1| Putative Quinoprotein ethanol dehydrogenase [Bradyrhizobium sp.
BTAi1]
Length = 554
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 75/332 (22%), Positives = 130/332 (39%), Gaps = 54/332 (16%)
Query: 2 LNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAGKDIS--ATPAVANGVVYFPSWNGY 59
LN+G N +R++ IN +NL W++ D S + P V GV+Y + N
Sbjct: 37 LNYGMGYNLQRFS-PLTQINKDNAKNLVPVWNYSFADDRSEESQPLVYQGVLYVTTHNAT 95
Query: 60 LYAVNAFNGALIWEQNL---------------SKLTGLSGTGIVVNVTVAVVVAVSRSNG 104
+ AV+A G IW+ + ++ L + A V+A+ G
Sbjct: 96 M-AVDAKTGKQIWKSKIDYPAETPRVVCCGIINRGAALFDGKVFRTTLDANVIALDAKTG 154
Query: 105 ELVWSTQI-DPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGR 163
+ +W + D + +T++ V G G+S E RG + D G+
Sbjct: 155 KELWRQKAADIKEGYSMTVAPLVADGVVITGISGAEFGT--------RGFIDGWDPATGK 206
Query: 164 IIWQTYMLPDNGGKRGGYSGAAVW---GSSPAIDVIRRQKQNN-----QTTKPTHPDQCI 215
+W+T+ +P G W G S I +QN P +
Sbjct: 207 HLWRTHTVPTPDEPGGDTWKGDTWKLGGGSTWITGSYDPEQNTVFWGVGNPGPFNAAVRP 266
Query: 216 SSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLL 275
++Y S++ALD +G++ W F F+ PNNP D D +L
Sbjct: 267 GDNLYTCSVLALDPKTGKMKWH--------FQFS---PNNP-------FDYDAVAEMVLA 308
Query: 276 TISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
++ G+ V++ ++GF + DR +G ++
Sbjct: 309 DMNVEGKPTKVLMNANRNGFFYVLDRSNGKLL 340
>gi|109898174|ref|YP_661429.1| Pyrrolo-quinoline quinone [Pseudoalteromonas atlantica T6c]
gi|109700455|gb|ABG40375.1| Pyrrolo-quinoline quinone [Pseudoalteromonas atlantica T6c]
Length = 587
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 70/354 (19%), Positives = 139/354 (39%), Gaps = 81/354 (22%)
Query: 2 LNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAG----KDISATPAVANGVVYFPSWN 57
+++G L +RY+ IN TV+ +R W+F G + + P + +GV+Y
Sbjct: 44 VSYGMGLKGQRYS-PLSKINGDTVQEIRPVWAFSLGGEKQRGQESQPLIKDGVMYVTGSY 102
Query: 58 GYLYAVNAFNGALIWEQN-------------LSKLTGLSGTGIVVNVTVAVVVAVSRSNG 104
+YA++A G +W+ + +++ L G ++ A +VA+++ G
Sbjct: 103 SRVYAIDANTGDELWQYDARLPDGIMPCCDVINRGVALYGELVIFGTLDAKLVALNKDTG 162
Query: 105 ELVWSTQI-DPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGR 163
++VW ++ D + IT + + G G++ E + G + D NG+
Sbjct: 163 KVVWKKKVEDYKAGYSITAAPIIVKGKIITGVAGGEFGV--------VGKVRAYDAVNGQ 214
Query: 164 IIWQT--------YMLPDNGGKRGGYSGAA--------VWGS-----------SPAIDVI 196
++W+ Y+ D G SG +W S P +D++
Sbjct: 215 LVWERPTVEGHMGYIWKDGKKTENGISGGKPGQTWPGDLWKSGGAAPWLGGTYDPDVDLL 274
Query: 197 RRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAW---AKPLGGYDIFYFTCLVP 253
N P + +++++S +A+D D+G+I W + P G+D L+
Sbjct: 275 FFGTGN---PAPWNSHLRPGDNLFSSSRLAIDPDTGKIVWHFQSTPHDGWDFDGVNELIS 331
Query: 254 NNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
NG+ + ++GF + +R++GD I
Sbjct: 332 ---------------------FDYKDNGKTIKAAGSADRNGFFYVLNRENGDYI 364
>gi|320109393|ref|YP_004184983.1| quinoprotein glucose dehydrogenase [Terriglobus saanensis SP1PR4]
gi|319927914|gb|ADV84989.1| Quinoprotein glucose dehydrogenase [Terriglobus saanensis SP1PR4]
Length = 742
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 69/323 (21%), Positives = 120/323 (37%), Gaps = 60/323 (18%)
Query: 20 INPVTVRNLRLRWSFYAGKD--ISATPAVANGVVYFPSWNGYLYAVNAFNGALIWE---- 73
IN V+ L+ W+F G ++P + ++ + G + A++ G W
Sbjct: 88 INRTNVKTLKQAWTFDTGDQGIWESSPLIVGRTLFIATPTGSIVALDGATGKQQWRFDPE 147
Query: 74 ----QNLSKLTGLSGTGIV---------VNVTVAVVVAVSRSNGELVWSTQIDPRPRSQ- 119
Q + L L I+ ++ V G + +D P
Sbjct: 148 TKSRQPIRGLAYLPEGKILAGIMSYLYELDAKTGKPVETFGKQGRIDLREDLDTDPAKAT 207
Query: 120 --ITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNGGK 177
+T G VY +G + E PA RG + DV G++ W + +P G
Sbjct: 208 VALTSPGVVYKDLIILGFRA-PETHPAP-----RGDIRAYDVHTGKLRWTFHTIPHPG-- 259
Query: 178 RGGYS--GAAVWGSSPAID-----VIRRQK-----QNNQTTKPTHPDQCISSDIYANSIV 225
GY A W + A + V+ + + + I ++++AN+++
Sbjct: 260 EFGYDTWAAGAWEHAGAANAWAGMVVDQPRGIVYIPTGSAVDDFYGGDRIGNNLFANTLL 319
Query: 226 ALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRD 285
ALD +G+ W +DI+ D DF P+LLT+ NG+ D
Sbjct: 320 ALDAATGKRLWHFQGIHHDIW------------------DRDFPAPPVLLTVQHNGKPVD 361
Query: 286 VVVAVQKSGFAWAFDRDSGDIIW 308
V K G+ + FDR +G ++
Sbjct: 362 AVAQTTKQGYVYLFDRVTGTPLF 384
>gi|367472226|ref|ZP_09471809.1| putative Quinoprotein ethanol dehydrogenase [Bradyrhizobium sp. ORS
285]
gi|365275310|emb|CCD84277.1| putative Quinoprotein ethanol dehydrogenase [Bradyrhizobium sp. ORS
285]
Length = 554
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 74/332 (22%), Positives = 130/332 (39%), Gaps = 54/332 (16%)
Query: 2 LNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAGKDIS--ATPAVANGVVYFPSWNGY 59
LN+G N +R++ IN +NL W++ D S + P + GV+Y + N
Sbjct: 37 LNYGMGYNLQRFST-LTQINKDNAKNLVPVWNYSFADDRSEESQPLIYQGVLYVTTHNAT 95
Query: 60 LYAVNAFNGALIWEQNL---------------SKLTGLSGTGIVVNVTVAVVVAVSRSNG 104
+ AV+A G IW+ + ++ L + A V+A+ G
Sbjct: 96 M-AVDAKTGKQIWKSKIDYPAETPRVVCCGIINRGAALYDGKVFRTTLDANVIALDAKTG 154
Query: 105 ELVWSTQI-DPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGR 163
+ +W + D + +T++ V G G+S E RG + D G+
Sbjct: 155 KELWRQKAADIKEGYSMTVAPLVADGVVLTGISGAEFGT--------RGFIDGWDPATGK 206
Query: 164 IIWQTYMLPDNGGKRGGYSGAAVW---GSSPAIDVIRRQKQNN-----QTTKPTHPDQCI 215
+W+T+ +P G W G S I +QN P +
Sbjct: 207 HLWRTHTVPTPDEPGGDTWKGDTWKLGGGSTWITGSYDPEQNTVFWGVGNPGPFNAAVRP 266
Query: 216 SSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLL 275
++Y S++ALD +G++ W F F+ PNNP D D +L
Sbjct: 267 GDNLYTCSVLALDPKTGKMKWH--------FQFS---PNNP-------FDYDAVAEMVLA 308
Query: 276 TISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
++ G+ V++ ++GF + DR +G ++
Sbjct: 309 DMNVEGKPTKVLMNANRNGFFYVLDRTNGKLL 340
>gi|365884598|ref|ZP_09423635.1| putative Quinoprotein ethanol dehydrogenase [Bradyrhizobium sp. ORS
375]
gi|365286790|emb|CCD96166.1| putative Quinoprotein ethanol dehydrogenase [Bradyrhizobium sp. ORS
375]
Length = 554
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 74/332 (22%), Positives = 129/332 (38%), Gaps = 54/332 (16%)
Query: 2 LNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAGKDIS--ATPAVANGVVYFPSWNGY 59
LN+G N +R++ IN +NL W++ D S + P + GV+Y + N
Sbjct: 37 LNYGMGYNLQRFST-LTQINKDNAKNLVPVWNYSFADDRSEESQPLIYQGVLYVTTHNAT 95
Query: 60 LYAVNAFNGALIWEQNLS---------------KLTGLSGTGIVVNVTVAVVVAVSRSNG 104
+ AV+A G IW+ + + L + A V+A+ G
Sbjct: 96 M-AVDAKTGKQIWKSKIEYPAETPRVVCCGIINRGAALYDGKVFRTTLDANVIALDAKTG 154
Query: 105 ELVWSTQI-DPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGR 163
+ +W + D + +T++ V G G+S E RG + D G+
Sbjct: 155 KELWRQKAADIKEGYSMTVAPLVADGVVLTGISGAEFGT--------RGFIDGWDPATGK 206
Query: 164 IIWQTYMLPDNGGKRGGYSGAAVW---GSSPAIDVIRRQKQNN-----QTTKPTHPDQCI 215
+W+T+ +P G W G S I +QN P +
Sbjct: 207 HLWRTHTVPTPDEPGGDTWKGDTWKLGGGSTWITGSYDPEQNTVFWGVGNPGPFNAAVRP 266
Query: 216 SSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLL 275
++Y S++ALD +G++ W F F+ PNNP D D +L
Sbjct: 267 GDNLYTCSVLALDPKTGKMKWH--------FQFS---PNNP-------FDYDAVAEMVLA 308
Query: 276 TISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
++ G+ V++ ++GF + DR +G ++
Sbjct: 309 DMNVEGKPTKVLMNANRNGFFYVLDRTNGKLL 340
>gi|310639418|ref|YP_003944177.1| sorbose dehydrogenase [Ketogulonicigenium vulgare Y25]
gi|385235533|ref|YP_005796873.1| Precursor of SSDA1 [Ketogulonicigenium vulgare WSH-001]
gi|308752994|gb|ADO44138.1| sorbose dehydrogenase [Ketogulonicigenium vulgare Y25]
gi|343464228|gb|AEM42662.1| Precursor of SSDA1 [Ketogulonicigenium vulgare WSH-001]
Length = 579
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 75/345 (21%), Positives = 128/345 (37%), Gaps = 52/345 (15%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWS--FYAGKDISATPAVANGVVYFPSWNG 58
WL++G N R++ I P V +L+L W+ + + P VA+GV+Y P+
Sbjct: 39 WLSYGHGPENYRHS-PLTQITPENVGSLQLVWARGMEPQGMVQSAPLVADGVLYLPNPGD 97
Query: 59 YLYAVNAFNGALIWEQ--------------NLSKLTGLSGTGIVVNVTVAVVVAVSRSNG 104
+ A++A G LIWE + L G ++ +VA++R +G
Sbjct: 98 VIQAIDAATGDLIWEHRRQLPDTTVLNTIGERKRGVALYGDNLLFMSWDNHLVALNRESG 157
Query: 105 ELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRI 164
++V+ ID R Q S G F + + A Q F + D G
Sbjct: 158 QVVYD--ID---RGQGDERISNSTGPFIA--NGVVVAGSTCQYSAFGCYVTGHDANTGEE 210
Query: 165 IWQTYMLPDNGGKRGGYSGAAVWGSS----------------PAIDVIRRQKQNNQTTKP 208
+W+ Y +P R G G WG+ P +++
Sbjct: 211 LWRNYFIP-----RPGEEGDETWGNDYESRWMTGAWGQVSYDPVTNLVYYGSSAVGPASE 265
Query: 209 THPDQCISSDIYANSIVALDIDSGRIAWAK---PLGGYDIFYFTCLVPNNPDCPPGPNLD 265
+ N+ A+ D+G I W P +D ++P + + P ++D
Sbjct: 266 AQRGTPGGTLHGTNTRFAVRPDTGEIVWQHQTLPRDNWDQECTFEMLPVSTNVNPAADMD 325
Query: 266 ADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDIIWFK 310
P T G R + K+G W FD ++G+ +W +
Sbjct: 326 GVLAINPNAAT----GERRVLTGVPCKTGTLWQFDAETGEFLWAR 366
>gi|302559170|ref|ZP_07311512.1| serine/threonine-protein kinase AfsK [Streptomyces griseoflavus
Tu4000]
gi|302476788|gb|EFL39881.1| serine/threonine-protein kinase AfsK [Streptomyces griseoflavus
Tu4000]
Length = 727
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 71/169 (42%), Gaps = 30/169 (17%)
Query: 16 GEVLINPVTVRNLRLRWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQN 75
G LI V R + +W+ A + P VA+G VYF + +G LYAV+A +G +W +
Sbjct: 551 GRTLIA-VDTRTRKQKWTHQAASEAETDPVVADGRVYFGTQDGALYAVDAESGDEVWRRT 609
Query: 76 LS------KLTGLSGTGIVVNVTV-----AVVVAVSRSNGELVWSTQIDPRPRSQITMSG 124
+L G +G VV TV V A G +W + ++ +
Sbjct: 610 FEGELWDGRLGGGAGAPDVVGGTVYFENDGYVSAFDADTGRTLWQR----KQKADEVEAL 665
Query: 125 SVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYMLPD 173
+V GA +V S G L+ LD R+G+ W+ + D
Sbjct: 666 TVADGAVHVYDSE--------------GDLSSLDARSGKPRWEESLTAD 700
>gi|339494982|ref|YP_004715275.1| alcohol dehydrogenase [Pseudomonas stutzeri ATCC 17588 = LMG 11199]
gi|338802354|gb|AEJ06186.1| alcohol dehydrogenase [Pseudomonas stutzeri ATCC 17588 = LMG 11199]
Length = 710
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 78/353 (22%), Positives = 131/353 (37%), Gaps = 76/353 (21%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRW--SFYAGKDISATPAVANGVVYFPSWNG 58
WL +G + +R++ + IN V L+ W D+ TP V +GV+Y+
Sbjct: 45 WLAYGRTHSEQRFSPLKD-INVDNVSQLKPEWYSPLPDRSDMVGTPLVVDGVMYYVGEMN 103
Query: 59 YLYAVNAFNGALIWE-----------QNLSKL-----TGLS--GTGIVVNVTVAVVVAVS 100
A +A G +WE N+ K+ GLS G + + ++A++
Sbjct: 104 RTRAFDARTGKKLWEYDPQVSKEILDNNMKKVFWKHNRGLSTYGDKLFIATWDGRLIAIN 163
Query: 101 RSNGELVWSTQ-IDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDV 159
R +G+ VW T+ D IT + G +VG E RG + D
Sbjct: 164 RKDGKEVWQTRTFDHDQPLNITGHPKAFDGKVFVGNGGTE-------LGPMRGYVTAYDA 216
Query: 160 RNGRIIWQTYMLPDNGGKRGGYSGAA------VW--------GSSPAIDVIRRQKQNNQ- 204
G+ +W+ Y++P G G+ AA W G A + NQ
Sbjct: 217 ETGKQVWRFYIVP--GNPADGFEDAAQEMAAKTWSGRWWENGGGGNAWHGWTYDAKYNQL 274
Query: 205 ----------TTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPN 254
K P+ +++ S+VA+D D+G W
Sbjct: 275 IFGTGNGGPWNIKVRSPEG--GDNLFLCSVVAVDADTGEYKW------------------ 314
Query: 255 NPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
+ PG D + +L + +G+ D V+ K+GF + DR +G ++
Sbjct: 315 HVQTAPGDTWDYNSNMDIVLADLKIDGKDVDAVLHAPKNGFFYTIDRSNGKVL 367
>gi|389870507|ref|YP_006377926.1| pyrrolo-quinoline quinone [Advenella kashmirensis WT001]
gi|388535756|gb|AFK60944.1| pyrrolo-quinoline quinone [Advenella kashmirensis WT001]
Length = 596
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 75/327 (22%), Positives = 128/327 (39%), Gaps = 49/327 (14%)
Query: 20 INPVTVRNLRLRW--SFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWE--QN 75
+N V+ L L W S G P V +G+++ ++ A++A G LIWE Q
Sbjct: 62 VNKKNVKQLDLAWAWSMPVGGLQETAPLVHDGIMFLGMNRSHVQALDATTGDLIWEYTQP 121
Query: 76 LSKLTG---------------LSGTGIVVNVTVAVVVAVSRSNGELVWSTQIDPRPRSQI 120
L K TG L + + A +VA+ G+ +W Q++ +
Sbjct: 122 LPKFTGGYHDAQANRQRNSLALYEDKVYLTTPDAKLVALEAKTGKKLWEVQVNEWEKGYS 181
Query: 121 TMSGSVYM-GAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYML--PDNGGK 177
+G + + G + G S A C + D G+ +W+ + P
Sbjct: 182 FTAGPLVVDGKVFTGTSGCSITGTAGGCY-----ITAHDAETGKELWRLNTIGDPAVDDS 236
Query: 178 RGGYSGAAVWGSSPAI----DVIRRQKQNNQTTKPTHPDQCISS----DIYANSIVALDI 229
GG + WG SP I D R+ +P S +Y +S +A+D
Sbjct: 237 WGGLAKENRWGGSPWITGSYDPKRKMLYWGIGMPIPYPSILRGSGDGDALYTSSTLAIDA 296
Query: 230 DSGRIAW---AKPLGGYDIF--YFTCLVPNNPDCPPGPNLDADFGEAPMLLTISTNGRFR 284
++G++ W P +D+ + LV + P+ D E + G+
Sbjct: 297 ETGKVKWHYQHMPNDDWDLDSPFERVLV----ESQIAPSKD----EVAYMSKDVEAGKKY 348
Query: 285 DVVVAVQ-KSGFAWAFDRDSGDIIWFK 310
DV+ +V K G A+ DRD+G ++W +
Sbjct: 349 DVIASVPGKYGTAFVLDRDTGKLLWAR 375
>gi|171057539|ref|YP_001789888.1| Pyrrolo-quinoline quinone [Leptothrix cholodnii SP-6]
gi|170774984|gb|ACB33123.1| Pyrrolo-quinoline quinone [Leptothrix cholodnii SP-6]
Length = 558
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 71/316 (22%), Positives = 125/316 (39%), Gaps = 60/316 (18%)
Query: 20 INPVTVRNLRLRWSFYAG---KDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQN- 75
IN V+ + + W G + ATP V +GV+Y + + ++A+NA GA++W
Sbjct: 59 INKANVKRMHVAWIHQPGAVTHGLQATPIVIDGVMYSIAADNNVFALNAATGAVLWRYTP 118
Query: 76 ------LSKLTGLSGTGIVVNVTVAVV-------VAVSRSNGELVWSTQIDPRPRSQITM 122
G + G+ V + +A+ + G+ +WSTQ+ + +
Sbjct: 119 KLDPVVREVFYGSASRGVTVGRGKVYIGSLDGRFIALDQKTGKELWSTQL-----TNMRA 173
Query: 123 SGSVYMGA--FYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYMLPD------- 173
G + G + DQ G + ++ G W T+ +P
Sbjct: 174 EGGALFSSPPQLAGNTLFGGTTGGDQPII--GKIYAVNADTGERTW-TFEIPRDDPKSWP 230
Query: 174 -NGGKRGGYSGAAVWGSSPAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSG 232
+ KRGG S P D I N + + D + ++Y +++ALD SG
Sbjct: 231 GDSRKRGGGSAWLPGTYDPTSDTIYIGTSN--ASPDFNRDDRMGDNLYTATVLALDAKSG 288
Query: 233 RIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEA-PMLLTISTNGRFRDVVVAVQ 291
++ W + VPN+ DF A LL ST+G + +V +
Sbjct: 289 KVKWHR-----------QEVPND---------TWDFDAAYESLLVPSTDG--KSALVHLN 326
Query: 292 KSGFAWAFDRDSGDII 307
K+GF + D+D+G ++
Sbjct: 327 KNGFVYVMDKDNGSML 342
>gi|339328201|ref|YP_004687893.1| alcohol dehydrogenase [Cupriavidus necator N-1]
gi|338170802|gb|AEI81855.1| alcohol dehydrogenase [Cupriavidus necator N-1]
Length = 706
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 77/352 (21%), Positives = 128/352 (36%), Gaps = 75/352 (21%)
Query: 3 NHGGDLNNRRYAYGEVLINPVT------VRNLRLRWS--FYAGKDISATPAVANGVVYFP 54
N GGD YGE +P++ V L L WS G +S P G +++
Sbjct: 46 NTGGDWAGWGRTYGEQHFSPLSEINGGNVNKLGLAWSVDLPPGNAVS-VPLAVGGTLFYT 104
Query: 55 SWNGYLYAVNAFNGALIWE----------QNLSKLTGLSGTG-----IVVNVTVAVVVAV 99
+ ++AVNA +G +W + L + G G I ++AV
Sbjct: 105 TGYSVIHAVNAASGKPLWRFDPKAAEAAGERLRQGWGSRGIAWWNGMIFTGTQDGRLIAV 164
Query: 100 SRSNGELVWSTQ-IDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLD 158
+ + G +WSTQ ++P I+ + V+ G +G + RG + D
Sbjct: 165 NAATGREIWSTQTLEPGDHRFISGAPRVFDGKVIIGHGGADSG-------AARGYVTAYD 217
Query: 159 VRNGRIIWQTYMLPDNGG--------------------KRGGYSGAAVWGS---SPAIDV 195
R G+ +W+ + +P N K GG G VW + D
Sbjct: 218 ARTGKQLWRFWTVPGNPANGFENDAMKMAARTWSGEWWKFGG--GGTVWNAMSYDADTDT 275
Query: 196 IRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNN 255
+ N + +++ SIVA+D +G W +
Sbjct: 276 VFIGTGNGAPWNHRIRSKGKGDNLFLCSIVAIDGKTGAYKWHYQVN-------------- 321
Query: 256 PDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
PG + D + L ++ NG R V++ K+GF + DR +G +I
Sbjct: 322 ----PGESWDYNAAMDMHLADLAINGTMRKVLIQAPKNGFLYVIDRLTGQLI 369
>gi|40063639|gb|AAR38428.1| PQQ enzyme repeat domain protein [uncultured marine bacterium 582]
Length = 557
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 100/241 (41%), Gaps = 56/241 (23%)
Query: 86 GIVVNVTV-AVVVAVSRSNGELVWSTQ-IDPRPRSQITMSGSVYMGAFYVGLSSLEEALP 143
G V T+ A V+A+ G +W TQ ID + +T++ + G G+S E +
Sbjct: 141 GKVFRTTLDAHVIALDAETGNELWRTQSIDHKTGYSMTVAPMMADGVLITGISGGEYGI- 199
Query: 144 ADQCCTFRGSLAKLDVRNGRIIWQTYMLP----------DNGGKRGGYSGAAVW--GS-S 190
RG L D G +W+TY +P +GG GA W GS
Sbjct: 200 -------RGYLEGYDPDTGVRVWRTYTIPAPGEPGSETWQDGGDAWTRGGAPTWLTGSYD 252
Query: 191 PAIDVIRRQKQN----NQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIF 246
P ++ + N N T+P ++YA+SI+ALD +G I W
Sbjct: 253 PELNTVFWGTGNPSSWNAATRP-------GDNLYASSILALDPKTGTIKW---------H 296
Query: 247 YFTCLVPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDI 306
Y T PN+P DF L+ +G R V++ ++GF + DR +G++
Sbjct: 297 YQTT--PNDP---------FDFDTVNELVHADIDG--RKVLMQANRNGFFYVLDRATGEL 343
Query: 307 I 307
I
Sbjct: 344 I 344
>gi|448317518|ref|ZP_21507069.1| PQQ-dependent enzyme-like protein [Natronococcus jeotgali DSM
18795]
gi|445603241|gb|ELY57208.1| PQQ-dependent enzyme-like protein [Natronococcus jeotgali DSM
18795]
Length = 572
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 72/330 (21%), Positives = 126/330 (38%), Gaps = 48/330 (14%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRW--SFYAGKDISATPAVANG---VVYFPS 55
WL +GG+ R +V I P V +L + + AG + TP + G ++Y +
Sbjct: 63 WLTYGGNYGQHRRTTADV-ITPDNVADLEVEYILDVGAGSSMEGTPLIVPGDPPIMYQSN 121
Query: 56 WNGYLYAVNAFNGALIWE-------------QNLSKLTGLSGTGIVVNVTVAVVVAVSRS 102
++ A++A G ++W + ++ G + + + VVA+ R
Sbjct: 122 GPNHVKAIDAREGDILWSYTYAVPSDVVLCCDDNNRGVAAYGDKVFMTTLDSGVVALDRY 181
Query: 103 NGELVWSTQI-DPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRN 161
GE W T D T + + G + G + E + RG LD
Sbjct: 182 TGEEAWYTSTADHEEGYSATWAPVAFDGMIFTGSAGGEYGV--------RGFHTALDAET 233
Query: 162 GRIIWQTYMLPDNG--GKRGGYSGAAVWGSSPAIDVIRRQKQNNQTTKPTHPDQCISSDI 219
G +W T+ P+ G S A W ++ IDV R+ D +
Sbjct: 234 GEELWHTWTSPETEWVGDSINQSCATNWMNA-TIDVEERRLYLPIGNPGPDFDGSVRPGP 292
Query: 220 YANS--IVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTI 277
NS + LD+D+G W+ +D++ + P L D + I
Sbjct: 293 NRNSCGTLTLDMDTGERLWSHQEVAHDVWDYDSAAPRI--------LIRD-------MEI 337
Query: 278 STNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
+DVVV+ K+G+ + D ++G++I
Sbjct: 338 EHRNTTKDVVVSAGKTGWVYTMDAETGELI 367
>gi|381202852|ref|ZP_09909961.1| alcohol dehydrogenase (acceptor) [Sphingobium yanoikuyae XLDN2-5]
Length = 677
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 83/349 (23%), Positives = 132/349 (37%), Gaps = 70/349 (20%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAGK-DISATPAVANGVVYFPSWNGY 59
W + GGD + Y+ + I+ V L L WS+ D P +GV+YF
Sbjct: 31 WSSFGGDDKEQHYSALD-QISADNVGKLGLAWSYDIDTYDSYTQPLAIDGVLYFAVGLSV 89
Query: 60 LYAVNAFNGALIWE-------QNLSKLTGLSGTG----------IVVNVTVAVVVAVSRS 102
++A++A G L+W+ Q +K +G G I ++AV
Sbjct: 90 VHALDAKTGKLLWQYDPDVASQPEAKWRMRAGWGTRGIAYKDGLIYTATREGRLIAVDAK 149
Query: 103 NGELVWSTQ-IDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRN 161
G+ WS Q +D IT V VG AD T RG + D +
Sbjct: 150 TGKPRWSVQTLDEAENGYITGPPWVAGDKIVVGFGG------ADYSPT-RGYVTAYDAKT 202
Query: 162 GRIIWQTYMLPDNGGK----RGGYSGAAVW--------GSSPAIDVIRRQKQNNQTTKPT 209
G+ W+ +++P + K + + A W G + + ++ T
Sbjct: 203 GKKAWRWFVVPGDPAKGFENKAMEAAAKTWTGEWWKFGGGGTVWHAMAYDAKYDRIYLGT 262
Query: 210 HP----DQCISS-----DIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPP 260
+Q I S ++Y SIVA+D+ +G AW Y +
Sbjct: 263 GNGWPWNQKIRSPGGGDNLYLASIVAIDVKTGEYAWH-----YQV--------------- 302
Query: 261 GPNLDADFGEAP--MLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
P DF +A L I G+ R V++ K+GF +A DR++G I
Sbjct: 303 NPENSHDFNDAMDIELADIEIGGKMRSVLMHAPKNGFFYALDRETGKFI 351
>gi|383456219|ref|YP_005370208.1| PQQ repeat-containing protein [Corallococcus coralloides DSM 2259]
gi|380734914|gb|AFE10916.1| PQQ repeat-containing protein [Corallococcus coralloides DSM 2259]
Length = 379
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 91/226 (40%), Gaps = 55/226 (24%)
Query: 29 RLRWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWE----QNLSKLTGLSG 84
++ WS G A + GV+Y P +G LYAV+ GA+ W+ ++L+ + L+
Sbjct: 85 KVAWSLRTGARALAGGLASEGVIYVPGGDGVLYAVDGRTGAVKWKYATNESLATVPVLAD 144
Query: 85 TGIVVNVTVAVVVAVSRSNGELVWSTQIDPRPRSQITMSGS----VYMGAFYVGLSSLEE 140
++V V AV ++G VW + D P S T+ G+ V YVG S
Sbjct: 145 GLVLVATDTDTVFAVKATDGTWVWQYRRD--PPSGFTVRGASAPRVDQDTAYVGFSD--- 199
Query: 141 ALPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYSGAAVW----GSSPAIDVI 196
G L L V +G ++W+ + SGA ++PAID
Sbjct: 200 -----------GFLVALKVEDGGVVWEKSL-----------SGAGTEFLDVDTTPAIDSA 237
Query: 197 RRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGG 242
R + Y N + AL+ D+G + W +GG
Sbjct: 238 GRLYVAS----------------YKNGLYALEADTGAVIWNATVGG 267
>gi|367473058|ref|ZP_09472627.1| putative Alcohol dehydrogenase (acceptor) [Bradyrhizobium sp. ORS
285]
gi|365274633|emb|CCD85095.1| putative Alcohol dehydrogenase (acceptor) [Bradyrhizobium sp. ORS
285]
Length = 580
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 65/305 (21%), Positives = 118/305 (38%), Gaps = 49/305 (16%)
Query: 20 INPVTVRNLRLRWSFYAG--KDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWE---- 73
IN V+++ W+F G + A P V NGV++ + G + A+NA G W
Sbjct: 69 INTTNVKSMVPVWTFATGVIEGHEAPPLVNNGVMFITTPMGQVIALNAKTGDQYWRYKRE 128
Query: 74 --QNLSKL------TGLSGTGIVVNVTVAVVVAVSRSNGELVWSTQIDPRPRSQ-ITMSG 124
+L +L GL + + T +VA+ G+++W ++ + Q +T+
Sbjct: 129 LPDDLFQLHPTNRGVGLWQDKLYLATTDDHLVALDAKTGKVLWDKKVQDYKKGQYLTLMP 188
Query: 125 SVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNG--------G 176
+ G VG S E + RG + D +G+ +W+T+ +P G G
Sbjct: 189 LIVDGKVMVGGSGGEFGV--------RGYVVAYDAEDGKELWRTFTIPGEGEPGHDTWSG 240
Query: 177 KRGGYSGAAVWGSSPAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAW 236
G + W + + P ++Y +S++ALD +G+I
Sbjct: 241 DDWKSGGGSAWMTGTYDKDTKTVYWGVGNAAPWPGGLHPGDNLYTSSVIALDPATGKIK- 299
Query: 237 AKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFA 296
T + D + D D +APML+ + +GR ++ +
Sbjct: 300 ------------THFQYHQND-----SWDWDEVDAPMLVDLQRDGRSFKSLIHPGRDAIF 342
Query: 297 WAFDR 301
W +R
Sbjct: 343 WVLER 347
>gi|448363589|ref|ZP_21552189.1| pyrrolo-quinoline quinone [Natrialba asiatica DSM 12278]
gi|445646402|gb|ELY99391.1| pyrrolo-quinoline quinone [Natrialba asiatica DSM 12278]
Length = 530
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 70/149 (46%), Gaps = 11/149 (7%)
Query: 1 WLNHGGDLNNRRY-AYGEVLINPVTVRNLRLRWSFYAGKDISATPAVANGVVYFPSWNGY 59
W +H GD + RY A G + + L WS + T AVA+ VY P+ +G
Sbjct: 13 WPSHRGDPGHARYIADG----HEFSGGELEAAWSLEGAG--AGTVAVADETVYTPTDDGV 66
Query: 60 LYAVNAFNGALIWEQNLSKLTGLSGTGIVVNVTVAVVVAVSRSNGELVWSTQIDPRPRSQ 119
+ A++A +G ++WE + S G V ++ VVA+ RS+G + W T+ D P +
Sbjct: 67 V-ALDATDGTVVWENTEVDASDPSVAGESVYLSGTEVVALDRSDGSVRWETEFD--PEEE 123
Query: 120 ITMSGSVYMGAFYVGLSSLEEALPADQCC 148
I Y G + V +L AL AD
Sbjct: 124 IVWQTVAYGGVYAVADGTL-YALEADDGS 151
>gi|448458089|ref|ZP_21595966.1| PQQ-dependent enzyme-like protein [Halorubrum lipolyticum DSM
21995]
gi|445809814|gb|EMA59851.1| PQQ-dependent enzyme-like protein [Halorubrum lipolyticum DSM
21995]
Length = 547
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 74/335 (22%), Positives = 131/335 (39%), Gaps = 58/335 (17%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAGKD--ISATPAVANG---VVYFPS 55
WL +GG+ R +V I P V +L L + + G + + TP V G V+Y +
Sbjct: 38 WLTYGGNYEQHRLTTADV-ITPENVGDLELEYELHVGAESSMEGTPLVVPGDPPVMYQSN 96
Query: 56 WNGYLYAVNAFNGALIWE-------------QNLSKLTGLSGTGIVVNVTVAVVVAVSRS 102
++ A++ +G ++W + ++ + G + + + VVA++R
Sbjct: 97 GPNHVKAIDTRSGDVLWSYTYAVPSDVVLCCDDNNRGVAILGDKVYMTTLDSGVVALNRY 156
Query: 103 NGELVWSTQI-DPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRN 161
GE W T D T + VY G Y G + E + RG LD
Sbjct: 157 TGEEEWYTSTADHESGYSATWAPVVYDGKVYTGSAGGEYGV--------RGFHMALDAET 208
Query: 162 GRIIWQTYMLPDNG--GKRGGYSGAAVWGSSPAIDVIRRQKQNNQTTKPT-HP----DQC 214
G +W+T+ PD G S A W ++ ID +N + P +P D
Sbjct: 209 GDEVWRTWTSPDEEWVGDSIEQSCATNWMTA-TIDT-----ENEKLYMPVGNPGPDFDGS 262
Query: 215 ISSDIYANS--IVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAP 272
+ NS + LD+ +G W +D++ + P L DF
Sbjct: 263 VRPGPNRNSAGTLCLDMQTGEREWFHQESPHDVWDYDSAAPR--------MLIRDF---- 310
Query: 273 MLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
+ DVV+++ K+ +++ + D+G ++
Sbjct: 311 ---EVEHRDYEDDVVISLGKTAWSYTVEADTGKLL 342
>gi|339017887|ref|ZP_08644033.1| alcohol dehydrogenase large subunit [Acetobacter tropicalis NBRC
101654]
gi|338753002|dbj|GAA07337.1| alcohol dehydrogenase large subunit [Acetobacter tropicalis NBRC
101654]
Length = 685
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 78/353 (22%), Positives = 128/353 (36%), Gaps = 68/353 (19%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRW--SFYAGKDISATPAVANGVVYFPSWNG 58
W HG +RY+ IN V+ L L W F + TP + +GV+Y +
Sbjct: 14 WPQHGRTAAEQRYS-PLSQINTENVKRLGLAWYEDFDTLRGQEGTPLIIDGVMYLTTNWS 72
Query: 59 YLYAVNAFNGALIW--EQNLSKLTGLSGTGIVVNVTVAV-------------VVAVSRSN 103
+ A+NA G L+W + + + G VN A ++A++ +
Sbjct: 73 KVEALNAATGELLWRYDPRVPGNVAVRGCCDTVNRGAAYWKGKVFVGTFDGRLIALNAKS 132
Query: 104 GELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTF--RGSLAKLDVRN 161
G L WS P S + GA V ++ + + F RG ++ D
Sbjct: 133 GHLEWSVDTIPHDASLGKIRSYTVDGAPRVAKGTV---IIGNGGAEFGARGFVSGFDAET 189
Query: 162 GRIIWQTYMLP-----------DNGGKRGGY-------------SGAAVWGS---SPAID 194
G++ W+ + +P D ++ Y G VW S P D
Sbjct: 190 GKLKWRFFTVPAPDNRPDGAASDEVLQKKAYRTWSPTGGWTESGGGGTVWDSIVYDPETD 249
Query: 195 VIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPN 254
++ N + I S+++ SIVA+ ++G W D + FT P
Sbjct: 250 LLFLGVGNGSPWNYQVRSKGIGSNLFLGSIVAIRPETGEYVWHFQETPMDQWDFTASQPI 309
Query: 255 NPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
M+L + NGR R V+ K+GF + D +G+ I
Sbjct: 310 ------------------MVLDLMLNGRKRHVLAQAPKNGFFYLLDAQTGEFI 344
>gi|375108027|ref|ZP_09754288.1| glucose dehydrogenase [Burkholderiales bacterium JOSHI_001]
gi|374668758|gb|EHR73543.1| glucose dehydrogenase [Burkholderiales bacterium JOSHI_001]
Length = 554
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 72/315 (22%), Positives = 123/315 (39%), Gaps = 64/315 (20%)
Query: 20 INPVTVRNLRLRWSFYAG---KDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQN- 75
IN V+ LR+ W G + ATP V +GV+Y + + ++A+NA G +IW
Sbjct: 55 INKDNVKKLRVAWVHQPGAITHGLQATPIVIDGVMYSIAADNNVFALNAATGEVIWRYTP 114
Query: 76 ------LSKLTGLSGTGIVVNVTVAVV-------VAVSRSNGELVWSTQID--------- 113
G + G+ V + +A+ + G+ VWSTQ+
Sbjct: 115 KLDPIVKEVFYGSASRGVTVGRGKVFIGSLDGRFIALDQKTGKQVWSTQLTNMKAEYGAL 174
Query: 114 ----PRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTY 169
P+ I G+ VG A D+ TF + + D ++ W
Sbjct: 175 FSSPPQLAGNILFGGTTGGDQPIVGKIFAVNADTGDRAWTFE--IPRDDPKS----W--- 225
Query: 170 MLPDNGGKRGGYSGAAVWGSSPAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDI 229
P + K+GG S P+ D I N + + D + ++Y +++AL
Sbjct: 226 --PGDSRKKGGGSAWLPGTYDPSTDTIYIGTSN--ASPDFNRDDRMGDNLYTATVLALAP 281
Query: 230 DSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVA 289
+GR+ W + VPN+ DF A L + +G+ + V+
Sbjct: 282 QTGRVKWHR-----------QEVPND---------TWDFDSAYEALLVP-DGQGKTVMAH 320
Query: 290 VQKSGFAWAFDRDSG 304
+ K+GF + D+D+G
Sbjct: 321 LNKNGFVYVMDKDNG 335
>gi|116620171|ref|YP_822327.1| quinoprotein glucose dehydrogenase [Candidatus Solibacter usitatus
Ellin6076]
gi|116223333|gb|ABJ82042.1| Quinoprotein glucose dehydrogenase [Candidatus Solibacter usitatus
Ellin6076]
Length = 681
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 76/329 (23%), Positives = 120/329 (36%), Gaps = 68/329 (20%)
Query: 20 INPVTVRNLRLRWSFYAGK---DISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNL 76
IN V +L++ W++ D P V +GV+Y + A+N G L+W +
Sbjct: 38 INRSNVSHLKVAWTYDTKDGPGDPQTQPIVVDGVLYGVTPTHKAIALNGATGKLLWTFD- 96
Query: 77 SKLTGLSGTG------------------IVVNVTVAVVVAVSRSNGELVWSTQIDPRP-- 116
+G+ G G V + A+ A + + +ID R
Sbjct: 97 ---SGIRGRGPNRSVVWWSPRTERRLFVAVQSFIYALDPATGKPMADFGEQGRIDLRQGL 153
Query: 117 -------RSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTY 169
+T G +Y VG L EALPA G + DVR G+ W +
Sbjct: 154 GRDAAKQSYVLTSPGIIYRDLLIVG-GRLPEALPAPP-----GDIRAYDVRTGKQRWTFH 207
Query: 170 MLPDNG--------GKRGGYSGAAVWGSSPAIDVIR--RQKQNNQTTKPTHPDQCISSDI 219
+P G YSG A + A+D R + + ++
Sbjct: 208 TIPHPGEPGYETWPSDAWTYSGGANNWAGMALDEKRGIVYVPTGSAASDFYGADRLGDNL 267
Query: 220 YANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTIST 279
YAN ++AL+ +G W +DI+ D DF P L+T+
Sbjct: 268 YANCLLALNAATGERVWHFQAVHHDIW------------------DRDFPSPPALVTVRH 309
Query: 280 NGRFRDVVVAVQKSGFAWAFDRDSGDIIW 308
GR D VV K G+ + F+R +G ++
Sbjct: 310 EGRTVDAVVQTSKQGWVYLFNRATGKPLF 338
>gi|427411677|ref|ZP_18901879.1| methanol/ethanol family PQQ-dependent dehydrogenase [Sphingobium
yanoikuyae ATCC 51230]
gi|425709967|gb|EKU72990.1| methanol/ethanol family PQQ-dependent dehydrogenase [Sphingobium
yanoikuyae ATCC 51230]
Length = 681
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 83/349 (23%), Positives = 132/349 (37%), Gaps = 70/349 (20%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAGK-DISATPAVANGVVYFPSWNGY 59
W + GGD + Y+ + I+ V L L WS+ D P +GV+YF
Sbjct: 35 WSSFGGDDKEQHYSALD-QISADNVGKLGLAWSYDIDTYDSYTQPLAIDGVLYFAVGLSV 93
Query: 60 LYAVNAFNGALIWE-------QNLSKLTGLSGTG----------IVVNVTVAVVVAVSRS 102
++A++A G L+W+ Q +K +G G I ++AV
Sbjct: 94 VHALDAKTGKLLWQYDPDVASQPEAKWRMRAGWGTRGIAYKDGLIYTATREGRLIAVDAK 153
Query: 103 NGELVWSTQ-IDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRN 161
G+ WS Q +D IT V VG AD T RG + D +
Sbjct: 154 TGKPRWSVQTLDEAENGYITGPPWVAGDKIVVGFGG------ADYSPT-RGYVTAYDAKT 206
Query: 162 GRIIWQTYMLPDNGGK----RGGYSGAAVW--------GSSPAIDVIRRQKQNNQTTKPT 209
G+ W+ +++P + K + + A W G + + ++ T
Sbjct: 207 GKKAWRWFVVPGDPAKGFENKAMEAAAKTWTGEWWKFGGGGTVWHAMAYDAKYDRIYLGT 266
Query: 210 HP----DQCISS-----DIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPP 260
+Q I S ++Y SIVA+D+ +G AW Y +
Sbjct: 267 GNGWPWNQKIRSPGGGDNLYLASIVAIDVKTGEYAWH-----YQV--------------- 306
Query: 261 GPNLDADFGEAP--MLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
P DF +A L I G+ R V++ K+GF +A DR++G I
Sbjct: 307 NPENSHDFNDAMDIELADIEIGGKMRSVLMHAPKNGFFYALDRETGKFI 355
>gi|224823915|ref|ZP_03697024.1| PQQ-dependent dehydrogenase, methanol/ethanol family
[Pseudogulbenkiania ferrooxidans 2002]
gi|224604370|gb|EEG10544.1| PQQ-dependent dehydrogenase, methanol/ethanol family
[Pseudogulbenkiania ferrooxidans 2002]
Length = 590
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 72/331 (21%), Positives = 118/331 (35%), Gaps = 75/331 (22%)
Query: 20 INPVTVRNLRLRWSFYAG----KDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQN 75
IN TV+ L WSF G + A P V +GV+Y + YAV+A G +WE N
Sbjct: 65 INAKTVKKLVPAWSFSFGGEKQRGQEAQPLVYDGVIYTTASYSRAYAVDARTGKKLWEYN 124
Query: 76 LSKLTGLSGTGIVVNVTVAV-------------VVAVSRSNGELVWSTQI-DPRPRSQIT 121
G+ V+N +A+ +VA+ R G++VW+ ++ + + T
Sbjct: 125 ARLPDGIMPCCDVINRGMAIYGDLVYFGTLDARLVALDRHTGKVVWTKKVGEYKEGYSYT 184
Query: 122 MSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGY 181
+ V G G+S E + G + D G ++W ++ + G G
Sbjct: 185 AAPMVVKGKLITGVSGGEFGI--------VGKVEARDALTGELVWSRPVIEGHMGTLNGK 236
Query: 182 S-------------------GAAVW---GSSPAIDVIRRQKQNNQTTKPTHPDQCISSDI 219
G A W P D I N P + ++
Sbjct: 237 ESTMTGKLNATWEGDQWKQGGGATWLGGTYDPETDTIFMGTGN---PAPWNSWTRKGDNL 293
Query: 220 YANSIVALDIDSGRIAW---AKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLT 276
Y S +AL+ D+G I W P G+D +P
Sbjct: 294 YTASTLALNPDNGEIKWHLQTTPHDGWDFDGVNEFIP---------------------FD 332
Query: 277 ISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
+ +G+ ++GF + DR +GD++
Sbjct: 333 LKKDGKVIKAGAKADRNGFFFVADRTNGDLL 363
>gi|393786271|ref|ZP_10374407.1| hypothetical protein HMPREF1068_00687 [Bacteroides nordii
CL02T12C05]
gi|392659900|gb|EIY53517.1| hypothetical protein HMPREF1068_00687 [Bacteroides nordii
CL02T12C05]
Length = 619
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 68/302 (22%), Positives = 120/302 (39%), Gaps = 47/302 (15%)
Query: 19 LINPVTVRNLRLRWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIW-----E 73
++ +++ + WSF++G I TPA A+G+V F S + ++Y +NA NG L+W E
Sbjct: 317 ILTAYSLKKGKKLWSFHSGNRIVGTPAAADGIVVFGSADKHIYGLNADNGTLLWKIEAGE 376
Query: 74 QNLSKLTGLSGTGIVVNVTVAVVVAVSRSNGELVWSTQ-----IDPRPRSQITMSGSVYM 128
L +T +G + + A+ GEL+W+ I+ RP + V
Sbjct: 377 PVLGAVTIDNGIA-YIGASDHTFRAIDIRTGELIWAYTGVKGYIETRP---LVEGDKVIF 432
Query: 129 GAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYSGAAVWG 188
GA + +L L + G+ +W+ G R +S AAVW
Sbjct: 433 GA-------------------WDNTLYALSKKEGKELWKW----TGGLTRMHFSPAAVWP 469
Query: 189 SSPAIDVIRRQKQNNQTTKPTHPDQCI--SSDIYANSIVALDIDSGRIAWAKPLGGYDIF 246
+ V Q T + + + + L D RI ++K + +
Sbjct: 470 VAANGKVFITDPQRAMTAIDLETGETVWRTFQSTVRETIGLSADKERI-YSKTMNDSIVC 528
Query: 247 YFTCLVPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDI 306
+ T + PD N+ + AP + + +G V+ K G +A + +G I
Sbjct: 529 FSTK--GDKPDQLWSSNVGFGYEHAPS-MQVEKDG----VMFGSTKGGLIFALEPLTGKI 581
Query: 307 IW 308
+W
Sbjct: 582 LW 583
>gi|444375931|ref|ZP_21175182.1| Methanol dehydrogenase large subunit protein [Enterovibrio sp.
AK16]
gi|443680019|gb|ELT86668.1| Methanol dehydrogenase large subunit protein [Enterovibrio sp.
AK16]
Length = 602
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 75/358 (20%), Positives = 136/358 (37%), Gaps = 84/358 (23%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAG--KDISATPAVANGVVY----FP 54
W+ GGD + RY+ IN +NL++ W+F G + P V +Y FP
Sbjct: 43 WVMWGGDYSGTRYSPLN-QINAENAKNLQVAWTFSTGVLRGHEGGPLVLGDTMYIHTPFP 101
Query: 55 SWNGYLYAVNAFNGALIWE---------------QNLSKLTGLSGTGIVVNVTVAVVVAV 99
+ ++A++ AL WE +++ + I + +VA+
Sbjct: 102 N---KVFAIDLKTKALKWEYEPKQDASVIAVMCCDTVNRGLAYADGKIFLQQADTTLVAL 158
Query: 100 SRSNGELVWST-QIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLD 158
++ G++VW DP+ + T + V G+S E + RG L +
Sbjct: 159 DQNTGKVVWKVVNGDPKVGATNTNAPLVVKDKIITGISGGEFGV--------RGYLTAYN 210
Query: 159 VRNGRIIWQTY-------MLPDNG-------------------GKRGGYSGAAVWG---S 189
+++G + W+ Y ML D G + G WG
Sbjct: 211 IKDGSVAWRAYSTGPDEEMLVDPEKTTEMLKPIGKDSSLESWEGDQWKIGGGTTWGWFSY 270
Query: 190 SPAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFT 249
P +++I N T P+ Q + Y+ +I+A D D+G W ++ T
Sbjct: 271 DPELNLIYYGTGNPSTWNPS---QRPGDNKYSMTIMARDADTGMAKW--------LYQMT 319
Query: 250 CLVPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
P D D +L+ G+ R ++V ++GF + DR++G+++
Sbjct: 320 ----------PHDEWDYDGVNEMILVDKKFKGKDRKLLVHFDRNGFGYTLDRETGELL 367
>gi|294146829|ref|YP_003559495.1| putative alcohol dehydrogenase [Sphingobium japonicum UT26S]
gi|292677246|dbj|BAI98763.1| putative alcohol dehydrogenase [Sphingobium japonicum UT26S]
Length = 691
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 78/347 (22%), Positives = 121/347 (34%), Gaps = 69/347 (19%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAGKDISAT-PAVANGVVYFPSWNGY 59
W +G + Y+ I+ TV +L L W F G + SAT P +GV+YF +
Sbjct: 42 WPGYGRSFGEQHYS-PLTQIDGKTVGDLGLAWWFDLGPENSATQPIAVDGVLYFGVGHSI 100
Query: 60 LYAVNAFNGALIWEQ----------NLSKLTGLSGTG-----IVVNVTVAVVVAVSRSNG 104
++A++A G L+W NL G G I ++A+ G
Sbjct: 101 VHAIDAKTGKLLWRHDPHAAEAAGPNLRLGWGSRGIAWGNGKIYTGTQDGRLIAIDARTG 160
Query: 105 ELVWSTQ-IDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGR 163
+ VWS Q D + I+ + Y G VG RG + D G+
Sbjct: 161 KEVWSVQTFDKNQPTYISGAPRYYAGKVIVGFGG--------DMGKVRGYVTTYDADTGK 212
Query: 164 IIWQTYMLPDNGG--------------------KRGGYSGAAVWGS---SPAIDVIRRQK 200
+W+ Y +P N K GG G VW + P D I
Sbjct: 213 QLWRFYTVPGNPADGFENKAMEMAAGTWSGEWWKYGG--GGTVWNAISYDPETDTIFLGT 270
Query: 201 QNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPP 260
N +++ S+VA+ +G W + P
Sbjct: 271 GNGYPWNHKVRSGGKGDNLFLASVVAVSGSTGEYKW------------------HYQQNP 312
Query: 261 GPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
G D + L ++ G+ R V+V K+G + DR +G +I
Sbjct: 313 GETWDYNAAMDMALADLTIAGKPRKVLVTAPKNGIFYVIDRVTGKLI 359
>gi|332185241|ref|ZP_08386990.1| PQQ enzyme repeat family protein [Sphingomonas sp. S17]
gi|332014965|gb|EGI57021.1| PQQ enzyme repeat family protein [Sphingomonas sp. S17]
Length = 440
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 61/123 (49%), Gaps = 4/123 (3%)
Query: 6 GDLNNRRYAYGEVLINPVTVRNLRLRWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNA 65
G+LN RY G +L R + S DI A P + G VY G + A+
Sbjct: 255 GELNAYRYENGRMLWQDALSRT-SISTSVSTLSDIDAAPVIDQGRVYALGQGGRMIALEL 313
Query: 66 FNGALIWEQNLSKLTG--LSGTGIVVNVTVAVVVAVSRSNGELVWSTQIDPRPRSQITMS 123
G +WEQN + ++ ++G I + A +VA++RS+G+ W Q+ PR R++ +
Sbjct: 314 STGQRLWEQNFAGISTPWIAGEWIFLVTDDARLVALARSSGKARWIAQL-PRFRNEKKKT 372
Query: 124 GSV 126
G+V
Sbjct: 373 GAV 375
Score = 39.3 bits (90), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 64/152 (42%), Gaps = 24/152 (15%)
Query: 29 RLRWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWE-QNLSKLTGLSGTG- 86
++ W + +P +ANG VY + + LYA+N +G +IW Q + G+ G
Sbjct: 181 KVLWRAKPSGPLRGSPTIANGNVYVLTQDNQLYALNQADGKIIWAGQGTLETQGVFGVAA 240
Query: 87 -------IVVNVTVAVVVAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLE 139
+V + + A NG ++W D R+ I+ S S LS ++
Sbjct: 241 PAASQGTVVAGFSSGELNAYRYENGRMLWQ---DALSRTSISTSVST--------LSDID 289
Query: 140 EALPADQCCTFR----GSLAKLDVRNGRIIWQ 167
A DQ + G + L++ G+ +W+
Sbjct: 290 AAPVIDQGRVYALGQGGRMIALELSTGQRLWE 321
>gi|221134498|ref|ZP_03560803.1| quinoprotein alcohol dehydrogenase [Glaciecola sp. HTCC2999]
Length = 595
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 68/348 (19%), Positives = 138/348 (39%), Gaps = 69/348 (19%)
Query: 2 LNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAG----KDISATPAVANGVVYFPSWN 57
+ +G L+ +RY+ + IN TV ++R W+F G + + P + +GV+Y
Sbjct: 44 VTNGLGLHGQRYSTLDT-INTQTVEDIRPVWAFSLGGEKQRGQESQPMIKDGVMYITGSY 102
Query: 58 GYLYAVNAFNGALIWEQN-------------LSKLTGLSGTGIVVNVTVAVVVAVSRSNG 104
++A++A G +W+ +++ L G ++ A +VA+++ G
Sbjct: 103 SRVFAIDARTGDELWQYEARLPDGIMPCCDVINRGVALYGDLVIFGTLDAKLVALNKDTG 162
Query: 105 ELVWSTQI-DPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGR 163
++VW ++ D + I+ + V G G++ E + G + D NG+
Sbjct: 163 KVVWKKKVEDYKAGYSISAAPIVVKGKVITGIAGGEFGI--------VGKVRAYDASNGK 214
Query: 164 IIWQT--------YMLPDNGGKRGGYSGAA--------VW---GSSPAIDVIRRQKQNNQ 204
++W+ Y++ D G SG A +W G++P + ++
Sbjct: 215 LVWERPTVEGHMGYIVKDGKKIENGISGGAPGKTWPADLWKSGGAAPWLGGTYDADTDSL 274
Query: 205 TTKPTHPDQCIS-----SDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCP 259
+P S + +++S +A+D D+G+I W +F
Sbjct: 275 FFGTGNPAPWNSHLRPGDNYFSSSRLAIDPDTGKIKW----------HFQTT-------- 316
Query: 260 PGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
P D D + G+ ++GF + +R++GD I
Sbjct: 317 PHDGWDYDGVNEVVSFDYQEQGKTIKAAATADRNGFFYVLNRENGDFI 364
>gi|448299671|ref|ZP_21489680.1| serine/threonine protein kinase [Natronorubrum tibetense GA33]
gi|445587646|gb|ELY41904.1| serine/threonine protein kinase [Natronorubrum tibetense GA33]
Length = 1115
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 59/116 (50%), Gaps = 8/116 (6%)
Query: 31 RWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTGLSGTGIVVN 90
W+F ++ ++P V N VY SW+G++YA++A +GA +W ++ +S + V N
Sbjct: 243 EWAFETDDEVRSSPTVYNETVYAGSWDGHMYALDAQSGAYVWSHSVGD-NHISPSPTVAN 301
Query: 91 VTVAV------VVAVSRSNGELVWS-TQIDPRPRSQITMSGSVYMGAFYVGLSSLE 139
T+ V A++ S GE VWS D S +VY+G+ L +L+
Sbjct: 302 DTLYFGSHNNNVYALNASTGEYVWSRATFDNVLSSPTVADDTVYIGSSDARLYALD 357
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 93/218 (42%), Gaps = 26/218 (11%)
Query: 32 WSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG---LSGTGIV 88
W+F G IS++P V +G VY S + +LYAV+A +G W + L +
Sbjct: 125 WAFETGGGISSSPFVDSGTVYIGSSDDHLYAVDAESGTEEWSFEVDHTVNSPFLYDGTVY 184
Query: 89 VNVTVAVVVAVSRSNGELVWSTQIDPRPRSQIT-MSGSVYMGAFYVGLSSLEEALPADQC 147
V+ + AV GE W + RS T ++G+VY+G+ L +L +A ++
Sbjct: 185 VSSWDENIYAVDAETGEKEWVFETGDTVRSSPTVVNGTVYVGSQDGHLYAL-DATSGNEE 243
Query: 148 CTFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGY-------SGAAVWGSSPAIDVIRRQK 200
F +VR+ ++ + G G+ SGA VW S
Sbjct: 244 WAFE---TDDEVRSSPTVYNETVY---AGSWDGHMYALDAQSGAYVWSHSVG-------- 289
Query: 201 QNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAK 238
N+ + PT + + + N++ AL+ +G W++
Sbjct: 290 DNHISPSPTVANDTLYFGSHNNNVYALNASTGEYVWSR 327
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 54/109 (49%), Gaps = 10/109 (9%)
Query: 30 LRWSFYAGKDISATPAVANGVVYFPS--WNGYLYAVNAFNGALIWEQNLSKLTGLSGTGI 87
++W+F AG +++ P + +G VY S +G+LYA++ G +W G+S +
Sbjct: 81 VKWAFDAGGTVNSAPTIVDGTVYVGSGGGDGHLYAIDVATGDEVW--AFETGGGISSSPF 138
Query: 88 VVNVTVAV------VVAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGA 130
V + TV + + AV +G WS ++D S G+VY+ +
Sbjct: 139 VDSGTVYIGSSDDHLYAVDAESGTEEWSFEVDHTVNSPFLYDGTVYVSS 187
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 50/121 (41%), Gaps = 11/121 (9%)
Query: 20 INPVTVRNLRLRWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKL 79
I V W F G + ++P V NG VY S +G+LYA++A +G W
Sbjct: 192 IYAVDAETGEKEWVFETGDTVRSSPTVVNGTVYVGSQDGHLYALDATSGNEEWAFETDDE 251
Query: 80 TGLSGTGIVVNVTVAV------VVAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYV 133
S T V N TV + A+ +G VWS + + I+ S +V Y
Sbjct: 252 VRSSPT--VYNETVYAGSWDGHMYALDAQSGAYVWSHSV---GDNHISPSPTVANDTLYF 306
Query: 134 G 134
G
Sbjct: 307 G 307
>gi|421600661|ref|ZP_16043630.1| Pyrrolo-quinoline quinone [Bradyrhizobium sp. CCGE-LA001]
gi|404267229|gb|EJZ31940.1| Pyrrolo-quinoline quinone [Bradyrhizobium sp. CCGE-LA001]
Length = 583
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 77/356 (21%), Positives = 127/356 (35%), Gaps = 76/356 (21%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAGKD--ISATPAVANGVVYF--PSW 56
W D N RY+ + IN L+L W+F G D A P V +G +Y P
Sbjct: 16 WPMAARDYANTRYSELD-QINTDNASRLQLAWTFSVGADRGQEAAPLVIDGTMYVVGPYA 74
Query: 57 NGY---LYAVNAFNGALIWEQNLSKLTGLSGTG---------------IVVNVTVAVVVA 98
Y ++A++A G L W +G I +N VA
Sbjct: 75 GPYPNRVFALDATTGELKWSYVPKPEPAAAGVACCDVVNRGLAFNNGKIFLNTLDNHSVA 134
Query: 99 VSRSNGELVWSTQIDPRPRSQ-ITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKL 157
+ G+ +W T++ + + ITM+ V G +G S E + RG L +
Sbjct: 135 LDAKTGKELWHTKLGEINKGETITMAPVVVKGKVLIGNSGGELGV--------RGWLTAV 186
Query: 158 DVRNGRIIWQTYML-PDNG-------------------------GKRGGYSGAAVWGSSP 191
D G I W+ Y PD R G WG
Sbjct: 187 DENTGAIAWRAYATGPDKDVLIGHDFKPFYDNLKGKDLGVKSWPADRWQVGGGTAWGWIS 246
Query: 192 AIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCL 251
+ P + +Q ++++ +I A + D+G WA + +D+F
Sbjct: 247 YDAELNLIYYGTANPSPWNANQRSGDNLWSATIFARNPDNGHAMWAYQVNPHDLF----- 301
Query: 252 VPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
D D +L+ + NG+ R V++ ++G+ + DR +G++I
Sbjct: 302 -------------DHDEINENVLVDLELNGQPRKVLIHPGRNGYMYVMDRATGEVI 344
>gi|380511616|ref|ZP_09855023.1| quinoprotein glucose dehydrogenase [Xanthomonas sacchari NCPPB
4393]
Length = 685
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 80/350 (22%), Positives = 121/350 (34%), Gaps = 91/350 (26%)
Query: 20 INPVTVRNLRLRWSFYAG-----------KDISATPAVANGVVYFPSWNGYLYAVNAFNG 68
I P + LR+ WSF G + A P V G +Y + G +A++A +G
Sbjct: 34 ITPDNIGRLRIAWSFRTGELGAGLPDPERRRFEANPLVLGGRMYLTTGTGIAFALDATSG 93
Query: 69 ALIWE----------------------QNLSKLTGLSGTGIVVNVTVAVVVAVSRSNGEL 106
+W ++ G IV A ++A+ ++G+
Sbjct: 94 RTLWSFDTKVARNKHYSDPASRGVSFWRDTQATAGACRERIVYGTLDARLIALDAADGKP 153
Query: 107 -----------------VWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCT 149
V D +T V VG S + A +
Sbjct: 154 CAGFGKDGTIDLHAGIDVHDNASDAWANYAVTSPPVVAGDVLVVGSSIGDNRGHALEQGV 213
Query: 150 FRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYSGAAVWGSSPAIDVIRRQKQNNQTTKPT 209
RG D R+GR +W+ +P + K + AA W + A V + P
Sbjct: 214 VRG----YDARSGRELWRWDPVPRDPAK----AAAAGWQPAQAATVGGGNAWAPLSVDPA 265
Query: 210 H-----PDQCISSDIY----------ANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPN 254
P S D Y A+S+VALD+ SGR WA+ L +D++
Sbjct: 266 LGLVYVPTGSASPDYYGGERLGDNRDADSLVALDLHSGRRVWAQQLVHHDLW-------- 317
Query: 255 NPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSG 304
D D P+L T+ T R V+ K+GF +AFDR G
Sbjct: 318 ----------DYDLASQPVLTTVQTAQGPRAAVLQATKTGFLFAFDRRDG 357
>gi|226227714|ref|YP_002761820.1| glucose dehydrogenase [Gemmatimonas aurantiaca T-27]
gi|226090905|dbj|BAH39350.1| glucose dehydrogenase [Gemmatimonas aurantiaca T-27]
Length = 731
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 81/207 (39%), Gaps = 34/207 (16%)
Query: 117 RSQITMSGSVYM--GAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDN 174
SQI S + VG SS+ P G++ D+ GR++W+ ++P
Sbjct: 240 ESQIAASSPAMVVGNVLIVGNSSIHGYYPIKASNPI-GTVRAFDIPTGRLLWKFNLIPQP 298
Query: 175 GG------KRGGYSGAAVWGSSPAIDVIRRQKQNNQTTKPT-------HPDQCISSDIYA 221
G K G G G A +Q P + +++
Sbjct: 299 GEYGADSWKNGSKQGTKGVGKVDAWAPYAADEQLGLVYIPVGMPLMDEYGGHRPGDNLFG 358
Query: 222 NSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTISTNG 281
NS+VALD+ +G+ W + +DI+ D D AP ++ ++ +G
Sbjct: 359 NSLVALDVKTGKRKWHFQMVHHDIW------------------DYDAPMAPNIMDVTVDG 400
Query: 282 RFRDVVVAVQKSGFAWAFDRDSGDIIW 308
R R VV K G+ + FDR +G+ IW
Sbjct: 401 RARKVVAQPTKQGWLYVFDRATGEPIW 427
>gi|116620306|ref|YP_822462.1| quinoprotein glucose dehydrogenase [Candidatus Solibacter usitatus
Ellin6076]
gi|116223468|gb|ABJ82177.1| quinoprotein glucose dehydrogenase [Candidatus Solibacter usitatus
Ellin6076]
Length = 706
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 74/348 (21%), Positives = 128/348 (36%), Gaps = 66/348 (18%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFY---AGKDISATPAVANGVVYFPSWN 57
W +G D RY+ + IN V L W+F+ +G+ +TP + V+Y +
Sbjct: 27 WPMYGHDAGGTRYSPLD-QINTKNVAKLERAWTFHTGESGRSFESTPIFVDNVLYLSTHT 85
Query: 58 GYLYAVNAFNGALIWEQNLSKL------------TGLSGTGIVVNVTVAVVVAVSRSNGE 105
+ A++ G +W + G I+V ++A+S G
Sbjct: 86 QKVIALDPVTGRELWRYDTHGTGRENRGVTYWPGDAQEGARILVGTGDGRLIALSAKTGV 145
Query: 106 LVWS-------------TQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRG 152
V T P+ IT ++Y VG ++ E G
Sbjct: 146 PVRGFGDNGVINLRAGITDKFPKAMYAITSPPAIYRDLVIVGPATQE-----GPSSGPSG 200
Query: 153 SLAKLDVRNGRIIWQTYMLPDNG-------GKRG--GYSGAAVWGSSPAIDVIRRQ---K 200
DVR G++ W+ ++ P G G G SG + WG + +D R
Sbjct: 201 DPRAFDVRTGKLRWRFHVGPQAGEAGSETWGPEGWKDRSGPSQWGFA-TLDTERGLVFLP 259
Query: 201 QNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPP 260
N D+ +++YANS++ALD +G++ W + +DI+
Sbjct: 260 VGNPADSFYGADRK-GTNLYANSVIALDALTGKLRWYYQVVHHDIW-------------- 304
Query: 261 GPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDIIW 308
D D P L+ + +G+ V + K G + DR +G ++
Sbjct: 305 ----DYDLAAPPALIDVKRDGKTIPAVAQITKMGLLFILDRITGKPVF 348
>gi|254445522|ref|ZP_05058998.1| Cytochrome c subfamily, putative [Verrucomicrobiae bacterium
DG1235]
gi|198259830|gb|EDY84138.1| Cytochrome c subfamily, putative [Verrucomicrobiae bacterium
DG1235]
Length = 729
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 80/342 (23%), Positives = 122/342 (35%), Gaps = 84/342 (24%)
Query: 20 INPVTVRNLRLRWSFYAGKD-------ISATPAVANGVVYFPSWNGYLYAVNAFNGALIW 72
I V L L W + G D I P V GV+Y N L A++A +G L+W
Sbjct: 55 ITEENVDRLELAWVWNEGADDPQGLSQIQCNPLVIGGVLYGTDANLDLIALDAKSGKLLW 114
Query: 73 EQN-LSKLTGLSGTGI--------------VVNVTVAVVVAVSRSNGELVWSTQIDPR-- 115
+ L G G+ ++ ++AV G + S D R
Sbjct: 115 RFDPYEGLDTKEGRGVNRGLAYWKSGDESRILFGVSRFLIAVDPETGTRIESFGTDGRID 174
Query: 116 -----------PRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRI 164
+ Q G VY +G+ E PA G + DVR+G +
Sbjct: 175 LKVDLGAGAQGLQVQANTPGVVYENLIVMGMRVGEGPAPAAP-----GPIRAYDVRSGEL 229
Query: 165 IWQTYMLPDNGGKRGGYS-----------GAAVWGSSPAIDVIRRQKQNNQTTKPTHPDQ 213
+W+ +P G GY GA VW + A+DV R PT
Sbjct: 230 VWRFNTIPQPG--EAGYETWPEEAYKSVGGANVW-TGMAVDVER-----GIVFCPTGSAA 281
Query: 214 C-------ISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDA 266
I ++YAN ++AL+ +G W +DI+ D
Sbjct: 282 FDFWGGDRIGQNLYANCLIALNAKTGERIWHYQFVHHDIW------------------DR 323
Query: 267 DFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDIIW 308
D P L+T+ G V + KSG + F+R++G+ ++
Sbjct: 324 DLPAPPNLVTVRHGGVEIPAVAQITKSGHVFVFNRETGEELF 365
>gi|317474479|ref|ZP_07933753.1| PQQ enzyme [Bacteroides eggerthii 1_2_48FAA]
gi|316909160|gb|EFV30840.1| PQQ enzyme [Bacteroides eggerthii 1_2_48FAA]
Length = 609
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 69/296 (23%), Positives = 119/296 (40%), Gaps = 47/296 (15%)
Query: 25 VRNLRLRWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIW-----EQNLSKL 79
+++ + W F +GK I TPAV+ G+V F S + +Y +NA NG L+W E L +
Sbjct: 311 LKDGKALWRFQSGKRIVGTPAVSEGIVVFGSADCKIYGLNAQNGNLLWTVETSEPVLGAV 370
Query: 80 TGLSGTGIVVNVTVAVVVAVSRSNGELVWSTQ-----IDPRPRSQITMSGSVYMGAFYVG 134
T +GT + + A++ NGE+ W+ I+ +P + V GA+
Sbjct: 371 TIDNGTA-YIGASDHTFRAINTCNGEIKWTFTGVKGYIETKP---LVTDSKVIFGAWDNT 426
Query: 135 LSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYSGAAVWGSSPAID 194
L +L +A +GR +W+ G R +S AAVW +
Sbjct: 427 LYALNKA-------------------DGRELWKW----TGGLTRMHFSPAAVWPVAAEGK 463
Query: 195 VIRRQKQNNQTTKPTHPDQCI--SSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLV 252
V Q T + + + L D RI ++K + + Y T
Sbjct: 464 VFITDPQRAMTAIEIETGNTVWRTFQSMVRETIGLSEDGERI-YSKTMNDSIVCYST--K 520
Query: 253 PNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDIIW 308
++P N+ + AP + + +G +V K G +A + +G ++W
Sbjct: 521 GSHPHELWASNVGFGYEHAPS-MQVEKDG----IVFGSTKEGLIFALEAKTGKVLW 571
>gi|163849555|ref|YP_001637598.1| methanol/ethanol family PQQ-dependent dehydrogenase
[Methylobacterium extorquens PA1]
gi|163661160|gb|ABY28527.1| PQQ-dependent dehydrogenase, methanol/ethanol family
[Methylobacterium extorquens PA1]
Length = 605
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 72/338 (21%), Positives = 134/338 (39%), Gaps = 79/338 (23%)
Query: 20 INPVTVRNLRLRWSFYAG--KDISATPAVANGVVYFPS-WNGYLYAVNAFN--GALIWEQ 74
I P +V+NLR+ ++F G + ++P V +G ++ S + LYA++ L W+
Sbjct: 66 ITPDSVKNLRVNFTFSVGVNRGQESSPLVIDGTMFVLSPYPNILYALDLTKPGAPLKWQY 125
Query: 75 NLSKLTGLSGTG---------------IVVNVTVAVVVAVSRSNGELVWSTQI-DPRPRS 118
N G I N VV+V + G+ W T++ +
Sbjct: 126 NPKPEAAAQGVACCDVVNRGPTFADGHIFFNTLDGNVVSVDAATGQEAWKTKVGNIHVGE 185
Query: 119 QITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYML-PD---- 173
+TM+ V G +VG S E + RG + LD ++G++ W+ + PD
Sbjct: 186 TMTMAPLVARGKVFVGNSGGEFGV--------RGWIQALDQQSGKVAWKAFNTGPDKDVL 237
Query: 174 -----------NGGKRGGYS----------GAAVWG---SSPAIDVIRRQKQNNQTTKPT 209
+ G+ G G VWG P ++++ N P
Sbjct: 238 IGPEFKPFYDMDKGQDLGVKTWPPQAWEQGGGTVWGWLSYDPDLNLLYHGTGN---PGPW 294
Query: 210 HPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFG 269
+ DQ + + + I A D ++G+ W +D++ D D
Sbjct: 295 NADQRPGDNKWTSGIFARDAETGQARWFYQWSPHDLY------------------DWDGI 336
Query: 270 EAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
+LL ++ G+ R V+V +++G+ + DR +G+++
Sbjct: 337 NEQILLDMTWKGQPRKVLVRPERNGYVYILDRTTGEVL 374
>gi|294101161|ref|YP_003553019.1| Pyrrolo-quinoline quinone [Aminobacterium colombiense DSM 12261]
gi|293616141|gb|ADE56295.1| Pyrrolo-quinoline quinone [Aminobacterium colombiense DSM 12261]
Length = 349
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 44/85 (51%), Gaps = 4/85 (4%)
Query: 32 WSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQN----LSKLTGLSGTGI 87
W F AG ++ TP GVVY G +YA+NA G LIW+ + ++ ++ I
Sbjct: 30 WQFEAGMPLTGTPTYDKGVVYIGDQGGAVYALNAETGELIWQYDAGTSINGAAAMNEKTI 89
Query: 88 VVNVTVAVVVAVSRSNGELVWSTQI 112
V T V A+ RS+G L+W T +
Sbjct: 90 FVGGTDGRVFAIERSSGNLLWQTLL 114
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 27/118 (22%), Positives = 58/118 (49%), Gaps = 5/118 (4%)
Query: 19 LINPVTVRNLRLRWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIW---EQN 75
L++ V ++ + +W + A I+ + +G ++F + G L+AV+A G ++W +
Sbjct: 222 LLSCVKIKGIIPQWKYNAKSAITTSATPEDGRLFFGTQKGILHAVDAITGQMLWTYETEG 281
Query: 76 LSKLTGLSGTGIV-VNVTVAVVVAVSRSNGELVWSTQIDPRPRSQITM-SGSVYMGAF 131
+ T ++ IV + V A+S +G ++W Q D + + G V++G+
Sbjct: 282 AMQATPIAFNNIVYIGTATGKVAAISAIDGNMIWEYQTDREILASPALGDGRVFLGSM 339
>gi|218131918|ref|ZP_03460722.1| hypothetical protein BACEGG_03541 [Bacteroides eggerthii DSM 20697]
gi|217986221|gb|EEC52560.1| PQQ enzyme repeat protein [Bacteroides eggerthii DSM 20697]
Length = 626
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 69/296 (23%), Positives = 119/296 (40%), Gaps = 47/296 (15%)
Query: 25 VRNLRLRWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIW-----EQNLSKL 79
+++ + W F +GK I TPAV+ G+V F S + +Y +NA NG L+W E L +
Sbjct: 328 LKDGKALWRFQSGKRIVGTPAVSEGIVVFGSADCKIYGLNAQNGNLLWTVETSEPVLGAV 387
Query: 80 TGLSGTGIVVNVTVAVVVAVSRSNGELVWSTQ-----IDPRPRSQITMSGSVYMGAFYVG 134
T +GT + + A++ NGE+ W+ I+ +P + V GA+
Sbjct: 388 TIDNGTA-YIGASDHTFRAINTCNGEIKWTFTGVKGYIETKP---LVTDSKVIFGAWDNT 443
Query: 135 LSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYSGAAVWGSSPAID 194
L +L +A +GR +W+ G R +S AAVW +
Sbjct: 444 LYALNKA-------------------DGRELWKW----TGGLTRMHFSPAAVWPVAAEGK 480
Query: 195 VIRRQKQNNQTTKPTHPDQCI--SSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLV 252
V Q T + + + L D RI ++K + + Y T
Sbjct: 481 VFITDPQRAMTAIEIETGNTVWRTFQSMVRETIGLSEDGERI-YSKTMNDSIVCYSTK-- 537
Query: 253 PNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDIIW 308
++P N+ + AP + + +G +V K G +A + +G ++W
Sbjct: 538 GSHPHELWASNVGFGYEHAPS-MQVEKDG----IVFGSTKEGLIFALEAKTGKVLW 588
>gi|114706743|ref|ZP_01439643.1| putative pqq dehydrogenase protein [Fulvimarina pelagi HTCC2506]
gi|114537691|gb|EAU40815.1| putative pqq dehydrogenase protein [Fulvimarina pelagi HTCC2506]
Length = 633
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 78/365 (21%), Positives = 138/365 (37%), Gaps = 91/365 (24%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAG--KDISATPAVANGVVY----FP 54
W G+ N+RY+ + +IN V ++ WSF G + P V V+Y FP
Sbjct: 38 WAMPTGNYANQRYSELD-MINKENVGDMVPAWSFSTGVLRGHEGNPLVIGNVMYVHTPFP 96
Query: 55 SWNGYLYAVN-AFNGALIWEQNLSK---------------------LTGLSGTGIVVNVT 92
+ +YA++ +G +IW+ + G + ++++
Sbjct: 97 N---IVYALDLTQDGRIIWKHEPKQDPNVIPVMCCDTVNRGVAYAPAEGENPAMVILHQA 153
Query: 93 VAVVVAVSRSNGELVWSTQI-DPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFR 151
V A++ GE +W TQ DP T + V+ +G+S E + R
Sbjct: 154 DTNVTALNAETGEQIWQTQNGDPSKGETGTAAPMVFKDKVLIGISGGEFGV--------R 205
Query: 152 GSLAKLDVRNGRIIWQTY-------ML--PDN-----------------GGKRGGYSGAA 185
GS+ ++ +G W+ Y ML P+N G + G
Sbjct: 206 GSVTAYNLSDGSQAWRAYSTGPDDEMLVDPENTMALGKPVGENSSIETWEGDQWQIGGGT 265
Query: 186 VWG---SSPAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGG 242
WG P ++++ N T P Q + ++ +I+A D DSG W +
Sbjct: 266 TWGWFAYDPELNLVYYGTGNPSTWNPA---QRPGDNKWSMTIMARDADSGMAKWLYQMTP 322
Query: 243 YDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRD 302
+D + F D +L I +G R +V ++GFA+ DR+
Sbjct: 323 HDEWDF------------------DGVNEMILADIDVDGEERKALVHFDRNGFAYTMDRE 364
Query: 303 SGDII 307
+G+++
Sbjct: 365 TGELL 369
>gi|333378019|ref|ZP_08469752.1| hypothetical protein HMPREF9456_01347 [Dysgonomonas mossii DSM
22836]
gi|332884039|gb|EGK04319.1| hypothetical protein HMPREF9456_01347 [Dysgonomonas mossii DSM
22836]
Length = 619
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 68/307 (22%), Positives = 119/307 (38%), Gaps = 47/307 (15%)
Query: 19 LINPVTVRNLRLRWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIW-----E 73
+++ +++R+ ++ W F I TPAV++ +V F S + Y+Y V+ G IW E
Sbjct: 317 ILSCLSLRDGKVIWRFKVNNRIVGTPAVSDDIVVFGSADKYIYGVHVNTGKQIWKYPAKE 376
Query: 74 QNLSKLTGLSGTGIVVNVTVAVVVAVSRSNGELVWSTQ-----IDPRPRSQITMSGSVYM 128
L +T G V + + A+S +G LVW I+ RP + V
Sbjct: 377 AVLGAVTIEDGIA-YVGASDHTMRAISIKDGSLVWEYSQVEGYIETRP---LIYEDKVIF 432
Query: 129 GAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYSGAAVWG 188
GA + ++ LD + G ++W+ D G R +S AAVW
Sbjct: 433 GA-------------------WDNNMYALDKKTGGLLWKW----DGGLNRMHFSPAAVWP 469
Query: 189 SSPAIDVIRRQKQNNQTTKPTHPDQCI--SSDIYANSIVALDIDSGRIAWAKPLGGYDIF 246
+ V T + + + + + L ID R+ ++K + +
Sbjct: 470 VAAHGKVFFTAPDRVMTALDAETGKTVWRTKESMVRETIGLSIDKTRL-YSKTMQDSVVC 528
Query: 247 YFTCLVPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDI 306
Y + + PD N + AP + N +V K+G +A D +G +
Sbjct: 529 Y--SALSDAPDKIWSVNAFYGYDHAPSMPVEKDN-----IVYGSTKNGIVFALDARTGKL 581
Query: 307 IWFKLAG 313
+W G
Sbjct: 582 LWKHKKG 588
>gi|317478525|ref|ZP_07937683.1| PQQ enzyme [Bacteroides sp. 4_1_36]
gi|316905278|gb|EFV27074.1| PQQ enzyme [Bacteroides sp. 4_1_36]
Length = 619
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 68/296 (22%), Positives = 115/296 (38%), Gaps = 47/296 (15%)
Query: 25 VRNLRLRWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIW-----EQNLSKL 79
++N + WSF +GK I TPAV+ G+V F S + ++Y +NA +G L+W E L +
Sbjct: 323 LKNGKKLWSFESGKRIVGTPAVSEGIVVFGSADRHIYGLNAKDGNLLWTVRAAEPVLGAV 382
Query: 80 TGLSGTGIVVNVTVAVVVAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLE 139
T GT + + A A G+++W+ Y G+
Sbjct: 383 TIADGTA-YIGASDATFRATDIHTGKVIWT----------------------YTGVKGYI 419
Query: 140 EALP---ADQCC--TFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYSGAAVWGSSPAID 194
E P D+ + +L L+ +GR +W+ G R +S AAVW +
Sbjct: 420 ETKPLVTEDKVIFGAWDNTLYALNKTDGRELWKW----TGGLTRMHFSPAAVWPVAADGK 475
Query: 195 VIRRQKQNNQTTKPTHPDQCI--SSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLV 252
V Q T H + + + L D RI ++K + + Y
Sbjct: 476 VFITDPQRAMTAIDIHTGNTVWRTFQSMVRETIGLSEDGERI-YSKTMNDSIVCY--AAQ 532
Query: 253 PNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDIIW 308
+ P N+ + AP + + G V+ K G +A + +G ++W
Sbjct: 533 GDTPRELWATNVGFGYEHAPS-MQVEKEG----VMFGSTKEGLIFALEGKTGKVLW 583
>gi|365895602|ref|ZP_09433707.1| Quinoprotein ethanol dehydrogenase [Bradyrhizobium sp. STM 3843]
gi|365423617|emb|CCE06249.1| Quinoprotein ethanol dehydrogenase [Bradyrhizobium sp. STM 3843]
Length = 563
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 79/343 (23%), Positives = 134/343 (39%), Gaps = 63/343 (18%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAG--KDISATPAVANGVVYFP-SWN 57
W G D N R++ + IN L L +SF + A+P V +Y SW
Sbjct: 33 WAMAGHDYGNTRFSPLKE-INADNAGKLSLVYSFSLASLRSNEASPIVIGNTLYVSTSWG 91
Query: 58 -GYLYAVNAFNGALIW--EQNL-------------SKLTGLSGTGIVVNVTVAVVVAVSR 101
Y+YA++A GA W E ++ ++ + + V + A+
Sbjct: 92 PKYVYALDAATGARKWTYEPDIPDDVLQFACCDVNNRGISYADGKLFVGRLDGKLTALDA 151
Query: 102 SNGELVWSTQI-DPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVR 160
+ G+ +W++++ D + S IT V G E + RGSL D+
Sbjct: 152 ATGKELWTSKVVDYKQGSVITSPPLVVRDKVITGFGGGEYGV--------RGSLQAFDIN 203
Query: 161 NGRIIWQTYMLPDNG--------GKRGGYSGAAVW--GS-SPAIDVIRRQKQN----NQT 205
+G+++WQTY +P G G G + G A W GS P D + N N
Sbjct: 204 SGKVLWQTYTVPAPGQPGSETWKGDTGLHGGGAAWLVGSYDPKSDTVYWGTSNPGPWNTA 263
Query: 206 TKPT-HPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNL 264
+ T + D +++Y S +ALD ++G I W + P
Sbjct: 264 VRSTGNGDFGKLTNLYTASTLALDPNTGNIKW------------------HIQTTPADAW 305
Query: 265 DADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
D D +L + G ++ ++GF + +R++G +I
Sbjct: 306 DYDGVNEAILADLKIGGAAVPTLMKADRNGFFFVANRETGKVI 348
>gi|162147824|ref|YP_001602285.1| alcohol dehydrogenase [Gluconacetobacter diazotrophicus PAl 5]
gi|161786401|emb|CAP55983.1| Alcohol dehydrogenase [acceptor] precursor [Gluconacetobacter
diazotrophicus PAl 5]
Length = 736
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 74/360 (20%), Positives = 129/360 (35%), Gaps = 82/360 (22%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFY--AGKDISATPAVANGVVYFPSWNG 58
WL +G + +RY+ + IN V NL+L W + + TP + +GV+Y +
Sbjct: 56 WLTYGRTYSEQRYSPLD-QINRSNVGNLKLAWYYDLDTNRGQEGTPLIVDGVMYATTNWS 114
Query: 59 YLYAVNAFNGALIWEQNLSKLTGLSGTGIVVNVTVAV---------------VVAVSRSN 103
+ A++A G L+W + ++ G V ++A+
Sbjct: 115 KMKALDAATGKLLWAYDPRVPGNIADKGCCDTVNRGAAYWNGKVYFGTFDGRLIALDAKT 174
Query: 104 GELVWSTQIDPRP-----RSQITMSGS--VYMGAFYVGLSSLEEALPADQCCTFRGSLAK 156
G+LVWS P + T+ G+ + G +G E RG ++
Sbjct: 175 GKLVWSVNTIPADAALGHQRSYTVDGAPRIAKGRVIIGNGGSEFGA--------RGFVSA 226
Query: 157 LDVRNGRIIWQTYMLPDNGGK--------------------------RGGYSGAAVWGS- 189
D G++ W+ Y +P+ K +GG G VW S
Sbjct: 227 FDAETGKLDWRFYTVPNAQNKPDNAPSDAVLMSKAYPTWSPTGAWTTQGG--GGTVWDSI 284
Query: 190 --SPAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFY 247
P D++ N +++ SIVAL ++G W D +
Sbjct: 285 VYDPVTDLVYLGVGNGSPWNYKFRSDGKGDNLFLGSIVALKPETGEYVWHFQETPMDQWD 344
Query: 248 FTCLVPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
+T + + M L + NG+ R V+V K+GF + D +G+ +
Sbjct: 345 YTSV------------------QQIMTLDLPINGQTRHVIVHAPKNGFFYIIDAKTGEFL 386
>gi|453328702|dbj|GAC89053.1| putative PQQ-dependent alcohol dehydrogenase large subunit
[Gluconobacter thailandicus NBRC 3255]
Length = 675
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 76/358 (21%), Positives = 127/358 (35%), Gaps = 78/358 (21%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRW--SFYAGKDISATPAVANGVVYFPSWNG 58
W HG +RY+ + IN T+ L L W F + ATP V +GV+Y +
Sbjct: 17 WPQHGRTAFEQRYSPLD-QINTQTIGRLGLAWHQDFDTLRGQEATPLVVDGVMYTTTNWS 75
Query: 59 YLYAVNAFNGALIWEQNLSKLTGLSGTG---------------IVVNVTVAVVVAVSRSN 103
+ A++A G ++W + ++G G + V ++A+ +
Sbjct: 76 KVEALDAATGRVLWRYDPRVPGNIAGRGCCDTVNRGAAFQDGRVYVGTFDGRLIALDAKS 135
Query: 104 GELVWSTQIDPRPRS-----QITMSGS--VYMGAFYVGLSSLEEALPADQCCTFRGSLAK 156
G L+WS P + T+ G+ V G +G E RG ++
Sbjct: 136 GALLWSVDTIPHDAALGDIRSYTIDGAPRVAKGVVIIGNGGSEFGA--------RGFVSG 187
Query: 157 LDVRNGRIIWQTYMLPDNGGK------------------------RGGYSGAAVWGS--- 189
D G++ W+ + +P G K G VW S
Sbjct: 188 FDAVTGKLKWRFFTVPAPGNKPDHAVSDKVLASVAYPSWSPTGGWLHSGGGGTVWDSILY 247
Query: 190 SPAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFT 249
P D++ N I +++ SIVA+ D+G W D + FT
Sbjct: 248 DPVTDLVYLGVGNGSPWNYKFRSNGIGDNLFVASIVAVRPDTGEYVWHFQETPKDQWDFT 307
Query: 250 CLVPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
P M+L + G+ R V+V K+GF + D ++G+ +
Sbjct: 308 ASQPM------------------MILDLPVKGKMRHVLVQAPKNGFFYMLDAETGEFL 347
>gi|209542445|ref|YP_002274674.1| PQQ-dependent dehydrogenase [Gluconacetobacter diazotrophicus PAl
5]
gi|209530122|gb|ACI50059.1| PQQ-dependent dehydrogenase, methanol/ethanol family
[Gluconacetobacter diazotrophicus PAl 5]
Length = 737
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 73/358 (20%), Positives = 129/358 (36%), Gaps = 78/358 (21%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFY--AGKDISATPAVANGVVYFPSWNG 58
WL +G + +RY+ + IN V NL+L W + + TP + +GV+Y +
Sbjct: 57 WLTYGRTYSEQRYSPLD-QINRSNVGNLKLAWYYDLDTNRGQEGTPLIVDGVMYATTNWS 115
Query: 59 YLYAVNAFNGALIWEQNLSKLTGLSGTGIVVNVTVAV---------------VVAVSRSN 103
+ A++A G L+W + ++ G V ++A+
Sbjct: 116 KMKALDAATGKLLWAYDPRVPGNIADKGCCDTVNRGAAYWNGKVYFGTFDGRLIALDAKT 175
Query: 104 GELVWSTQIDPRP-----RSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLD 158
G+LVWS P + T+ G+ + V + + A RG ++ D
Sbjct: 176 GKLVWSVNTIPADAALGHQRSYTVDGAPRIAKGRVIIGNGGSEFGA------RGFVSAFD 229
Query: 159 VRNGRIIWQTYMLPDNGGK--------------------------RGGYSGAAVWGS--- 189
G++ W+ Y +P+ K +GG G VW S
Sbjct: 230 AETGKLDWRFYTVPNAQNKPDNAPSDAVLMSKAYPTWSPTGAWTTQGG--GGTVWDSIVY 287
Query: 190 SPAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFT 249
P D++ N +++ SIVAL ++G W D + +T
Sbjct: 288 DPVTDLVYLGVGNGSPWNYKFRSDGKGDNLFLGSIVALKPETGEYVWHFQETPMDQWDYT 347
Query: 250 CLVPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
+ + M L + NG+ R V+V K+GF + D +G+ +
Sbjct: 348 SV------------------QQIMTLDLPINGQTRHVIVHAPKNGFFYIIDAKTGEFL 387
>gi|398890300|ref|ZP_10643937.1| PQQ-dependent dehydrogenase, methanol/ethanol family [Pseudomonas
sp. GM55]
gi|398188264|gb|EJM75572.1| PQQ-dependent dehydrogenase, methanol/ethanol family [Pseudomonas
sp. GM55]
Length = 591
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 74/351 (21%), Positives = 135/351 (38%), Gaps = 75/351 (21%)
Query: 2 LNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAG----KDISATPAVANGVVYFPSWN 57
+ +G + +RY+ ++L N V+ LR W+F G + A P V +GV+Y
Sbjct: 45 VTNGLGVQGQRYSPLDIL-NVDNVKELRPAWAFSFGGEKQRGQQAQPMVKDGVMYMTGSY 103
Query: 58 GYLYAVNAFNGALIWEQN-------------LSKLTGLSGTGIVVNVTVAVVVAVSRSNG 104
++AV+A G +W+ + +++ L G ++ A +VA+++ G
Sbjct: 104 SRVFAVDARTGKKLWQYDARLPDDIRPCCDVINRGVALYGDLVIFGTLDAKLVALNKDTG 163
Query: 105 ELVWSTQI-DPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGR 163
++VWS ++ D + I+ + V G G++ E + G + D +NG
Sbjct: 164 KVVWSKKVADHKEGYSISAAPLVINGKLITGVAGGEFGV--------VGKIEAYDPKNGD 215
Query: 164 IIWQT--------YMLPDNGGKRGGYSGAA--------VW---GSSPAIDVIRRQKQN-- 202
++W Y+ D G SG +W G++P + + N
Sbjct: 216 LLWTRPTVEGHMGYVYKDGKAVENGISGGEAGKTWPGDLWKTGGAAPWLGGYYDPETNLL 275
Query: 203 ---NQTTKPTHPDQCISSDIYANSIVALDIDSGRIAW---AKPLGGYDIFYFTCLVPNNP 256
P + ++Y++S +AL+ D G I W + P G+D LV N
Sbjct: 276 LFGTGNPAPWNSHLRPGDNLYSSSRLALNPDDGTIKWHFQSTPHDGWDYDGVNELVSFN- 334
Query: 257 DCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
S G+ ++GF + DR +G I
Sbjct: 335 --------------------YSEGGKEIKAAATADRNGFFYVLDRTNGKFI 365
>gi|326403933|ref|YP_004284015.1| putative quinoprotein ethanol dehydrogenase [Acidiphilium
multivorum AIU301]
gi|325050795|dbj|BAJ81133.1| putative quinoprotein ethanol dehydrogenase [Acidiphilium
multivorum AIU301]
Length = 570
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 76/331 (22%), Positives = 133/331 (40%), Gaps = 59/331 (17%)
Query: 10 NRRYAYGE----VLINPVTVRNLRLRWSFYAGKDI----SATPAVANGVVYFPSWNGYLY 61
NR YA + IN V +L+ WS A DI TP V ++ + +L
Sbjct: 53 NRSYAGDDYAPFAQINTKNVASLKPAWS-SAKIDIPNGFEGTPIVNGDYMFATTPLDHLI 111
Query: 62 AVNAFNGALIWEQN--LSKLTGLSGTGIVVNVTVAV-------------VVAVSRSNGEL 106
A NA G +WE + L K + V N VAV V+A+ + G++
Sbjct: 112 AFNAKTGKKLWEYDYDLPKTALKTVCCDVNNRGVAVYGNEVFMGTLDNHVLALDATTGKV 171
Query: 107 VWSTQID-PRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRII 165
+W+ ++ P I+ + + G +G E RG + LD + G+++
Sbjct: 172 LWNVALEKPGIGYSISEAPMIVDGKVIIGSGGGEYGA--------RGFIVGLDAQTGKLL 223
Query: 166 WQTYMLP---DNGGKRGGYSGAAVWGSSPAIDVIRRQKQNNQTTKPTHPDQCISS----- 217
W+TY +P + GGK G SP + K +P ++S
Sbjct: 224 WKTYTIPSPSEPGGKTWPAGAYKHGGGSPWMTGTYDPKTKQLFWGVGNPGPWLASMRPGN 283
Query: 218 DIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTI 277
++Y++S++A+D ++G I W D + D D L I
Sbjct: 284 NLYSDSVIAIDPNTGAIKWHYQYTRNDTW------------------DYDGVNTAQLADI 325
Query: 278 STNGRFRDVVVAVQKSGFAWAFDRDSGDIIW 308
+ G+ +V ++G+ +A +R++G +I+
Sbjct: 326 TYKGKPYHALVEANRNGYFYAINRETGKLIY 356
>gi|148260737|ref|YP_001234864.1| Pyrrolo-quinoline quinone [Acidiphilium cryptum JF-5]
gi|146402418|gb|ABQ30945.1| Pyrrolo-quinoline quinone [Acidiphilium cryptum JF-5]
Length = 570
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 76/331 (22%), Positives = 133/331 (40%), Gaps = 59/331 (17%)
Query: 10 NRRYAYGE----VLINPVTVRNLRLRWSFYAGKDI----SATPAVANGVVYFPSWNGYLY 61
NR YA + IN V +L+ WS A DI TP V ++ + +L
Sbjct: 53 NRSYAGDDYAPFAQINTKNVASLKPAWS-SAKIDIPNGFEGTPIVNGDYMFATTPLDHLI 111
Query: 62 AVNAFNGALIWEQN--LSKLTGLSGTGIVVNVTVAV-------------VVAVSRSNGEL 106
A NA G +WE + L K + V N VAV V+A+ + G++
Sbjct: 112 AFNAKTGQKLWEYDYDLPKTALKTVCCDVNNRGVAVYGNEVFMGTLDNHVLALDATTGKV 171
Query: 107 VWSTQID-PRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRII 165
+W+ ++ P I+ + + G +G E RG + LD + G+++
Sbjct: 172 LWNVALEKPGIGYSISEAPMIVDGKVIIGSGGGEYGA--------RGFIVGLDAQTGKLL 223
Query: 166 WQTYMLP---DNGGKRGGYSGAAVWGSSPAIDVIRRQKQNNQTTKPTHPDQCISS----- 217
W+TY +P + GGK G SP + K +P ++S
Sbjct: 224 WKTYTIPSPSEPGGKTWPAGAYKHGGGSPWMTGTYDPKTKQLFWGVGNPGPWLASMRPGN 283
Query: 218 DIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTI 277
++Y++S++A+D ++G I W D + D D L I
Sbjct: 284 NLYSDSVIAIDPNTGAIKWHYQYTRNDTW------------------DYDGVNTAQLADI 325
Query: 278 STNGRFRDVVVAVQKSGFAWAFDRDSGDIIW 308
+ G+ +V ++G+ +A +R++G +I+
Sbjct: 326 TYKGKPYHALVEANRNGYFYAINRETGKLIY 356
>gi|398998485|ref|ZP_10701259.1| PQQ-dependent dehydrogenase, methanol/ethanol family [Pseudomonas
sp. GM21]
gi|398120282|gb|EJM09947.1| PQQ-dependent dehydrogenase, methanol/ethanol family [Pseudomonas
sp. GM21]
Length = 591
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 73/351 (20%), Positives = 136/351 (38%), Gaps = 75/351 (21%)
Query: 2 LNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAG----KDISATPAVANGVVYFPSWN 57
+ +G + +RY+ ++L N V+ +R W+F G + A P V +GV+Y
Sbjct: 45 VTNGLGVQGQRYSPLDIL-NVDNVKEMRPVWAFSFGGEKQRGQQAQPMVKDGVMYMTGSY 103
Query: 58 GYLYAVNAFNGALIWEQN-------------LSKLTGLSGTGIVVNVTVAVVVAVSRSNG 104
++AV+A G +W+ + +++ L G ++ A +VA+++ G
Sbjct: 104 SRVFAVDARTGKKLWQYDARLPDDIRPCCDVINRGVALYGDLVIFGTLDAKLVALNKDTG 163
Query: 105 ELVWSTQI-DPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGR 163
++VWS ++ D + I+ + V G G++ E + G +A D +NG
Sbjct: 164 KVVWSKKVADHKEGYSISAAPLVINGKLITGVAGGEFGV--------VGKIAAYDPKNGE 215
Query: 164 IIW--------QTYMLPDNGGKRGGYSGAA--------VW---GSSPAIDVIRRQKQN-- 202
++W Y+ D G SG +W G++P + + N
Sbjct: 216 LLWVRPTVEGHMGYIYKDGKAIENGISGGEAGKTWPGDLWKTGGAAPWLGGYYDPETNLL 275
Query: 203 ---NQTTKPTHPDQCISSDIYANSIVALDIDSGRIAW---AKPLGGYDIFYFTCLVPNNP 256
P + ++Y++S +AL+ D G I W + P G+D LV N
Sbjct: 276 LFGTGNPAPWNSHLRPGDNLYSSSRLALNPDDGTIKWHFQSTPHDGWDYDGVNELVSFN- 334
Query: 257 DCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
+ G+ ++GF + DR +G I
Sbjct: 335 --------------------YTEGGKEIKAAATADRNGFFYVLDRTNGKFI 365
>gi|323138333|ref|ZP_08073404.1| PQQ-dependent dehydrogenase, methanol/ethanol family [Methylocystis
sp. ATCC 49242]
gi|322396416|gb|EFX98946.1| PQQ-dependent dehydrogenase, methanol/ethanol family [Methylocystis
sp. ATCC 49242]
Length = 639
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 96/245 (39%), Gaps = 59/245 (24%)
Query: 96 VVAVSRSNGELVWSTQI-DPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSL 154
VVAV+ G VW T++ DP + + V G S E + RGS+
Sbjct: 187 VVAVNARTGAQVWRTKVADPWLGETLNTAPIVVRDKVIFGSSGSEMGV--------RGSV 238
Query: 155 AKLDVRNGRIIWQTYML-PDN------------GGKRGGYSGAAVWGSS----------- 190
L++ GR++W+ Y PD RG G + W ++
Sbjct: 239 RALNINTGRLVWRAYATGPDTDVLIDSTFRPYFAKDRGANLGVSTWPTNMWRHGGATSWA 298
Query: 191 -----PAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDI 245
PA+++I T +PD + + +I A + D+G+ AWA L +D
Sbjct: 299 WITYDPALNLIFYGTSQPGTF---NPDMRPGDNKWGATIFARNPDTGKAAWAYQLVPHDS 355
Query: 246 FYFTCLVPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGD 305
+ + + N ++ ++ NG R V+V K+GFA+ DR +G
Sbjct: 356 WDYDAVNENT------------------VVDLTVNGVVRKVIVHFDKNGFAYTLDRATGA 397
Query: 306 IIWFK 310
+I K
Sbjct: 398 LISAK 402
>gi|426409844|ref|YP_007029943.1| quinoprotein ethanol dehydrogenase [Pseudomonas sp. UW4]
gi|426268061|gb|AFY20138.1| quinoprotein ethanol dehydrogenase [Pseudomonas sp. UW4]
Length = 591
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 74/351 (21%), Positives = 135/351 (38%), Gaps = 75/351 (21%)
Query: 2 LNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAG----KDISATPAVANGVVYFPSWN 57
+ +G + +RY+ ++L N V+ LR W+F G + A P V +GV+Y
Sbjct: 45 VTNGLGVQGQRYSPLDIL-NVDNVKELRPAWAFSFGGEKQRGQQAQPMVKDGVMYMTGSY 103
Query: 58 GYLYAVNAFNGALIWEQN-------------LSKLTGLSGTGIVVNVTVAVVVAVSRSNG 104
++AV+A G +W+ + +++ L G ++ A +VA+++ G
Sbjct: 104 SRVFAVDARTGKKLWQYDARLPDDIRPCCDVINRGVALYGDLVIFGTLDAKLVALNKDTG 163
Query: 105 ELVWSTQI-DPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGR 163
++VWS ++ D + I+ + V G G++ E + G + D +NG
Sbjct: 164 KVVWSKKVADHKEGYSISAAPLVINGKLITGVAGGEFGV--------VGKIEAYDPKNGD 215
Query: 164 IIWQT--------YMLPDNGGKRGGYSGAA--------VW---GSSPAIDVIRRQKQN-- 202
++W Y+ D G SG +W G++P + + N
Sbjct: 216 LLWTRPTVEGHMGYVYKDGKAVENGISGGEAGKTWPGDLWKTGGAAPWLGGYYDPETNLL 275
Query: 203 ---NQTTKPTHPDQCISSDIYANSIVALDIDSGRIAW---AKPLGGYDIFYFTCLVPNNP 256
P + ++Y++S +AL+ D G I W + P G+D LV N
Sbjct: 276 LFGTGNPAPWNSHLRPGDNLYSSSRLALNPDDGTIKWHFQSTPHDGWDYDGVNELVSFN- 334
Query: 257 DCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
S G+ ++GF + DR +G I
Sbjct: 335 --------------------YSEGGKEIKAAATADRNGFFYVLDRTNGKFI 365
>gi|338214852|ref|YP_004658915.1| quinoprotein glucose dehydrogenase [Runella slithyformis DSM 19594]
gi|336308681|gb|AEI51783.1| Quinoprotein glucose dehydrogenase [Runella slithyformis DSM 19594]
Length = 703
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 68/338 (20%), Positives = 125/338 (36%), Gaps = 76/338 (22%)
Query: 20 INPVTVRNLRLRWSFYAG--------KDISATPAVANGVVYFPSWNGYLYAVNAFNGALI 71
IN V L++ W++ +G + P + +G++Y S N ++A++A NG I
Sbjct: 47 INAANVSQLKVAWTYASGGADTVLHRTQMQCNPIIVDGILYGVSANTQVFALDAANGNPI 106
Query: 72 WEQNLSKLTGLSGTGIV--------------------VNVTVAVVVAVSRSNGELVWSTQ 111
W+ +++ G + G+ + + NG +
Sbjct: 107 WKTKIAETEGTTSRGVTYWREGQEKIIFFGAGKWLYAFDALRGKPIVTFGQNGRVDLKEG 166
Query: 112 IDPRPRSQITMSGS---VYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQT 168
++ + ++ + ++ VG+ E G + DVR G+ +W
Sbjct: 167 LERPGADEYVVANTPNVIFKNLLIVGVRVSESE------TALLGDIRAYDVRTGKKVWTF 220
Query: 169 YMLPDNG---------GKRGGYSGAAVWGSSPAIDVIRRQKQNNQTTKPTHPDQC----- 214
+P+ G R GA W AID ++ PT
Sbjct: 221 RTIPEMGESGADTWPANARQRIGGANAWAGM-AID-----RERGIVYAPTGSAAFDFFGG 274
Query: 215 --ISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAP 272
+++AN ++ALD +G+ W L +DI+ + D P PNL + P
Sbjct: 275 NRKGDNLFANCLLALDATTGKRLWHYQLVRHDIW--------DRDPPAPPNLVTVTHKGP 326
Query: 273 MLLTISTNGRFR--DVVVAVQKSGFAWAFDRDSGDIIW 308
+GR R D V + K G+ + FDR +G ++
Sbjct: 327 -------DGRPRKVDAVAQITKQGYIFVFDRVTGKPLF 357
>gi|395227157|ref|ZP_10405485.1| outer membrane protein assembly complex subunit YfgL [Citrobacter
sp. A1]
gi|424731698|ref|ZP_18160280.1| outer membrane protein assembly complex subunit [Citrobacter sp.
L17]
gi|394719340|gb|EJF24945.1| outer membrane protein assembly complex subunit YfgL [Citrobacter
sp. A1]
gi|422893836|gb|EKU33652.1| outer membrane protein assembly complex subunit [Citrobacter sp.
L17]
Length = 392
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 96/243 (39%), Gaps = 58/243 (23%)
Query: 44 PAVANGVVYFPSWNGYLYAVNAFNGALIWEQNL-----------SKLTG---LSGTGIVV 89
PA+A+ VVY S G + A+NA +G +W NL ++L+G +SG + +
Sbjct: 65 PALADNVVYAASRAGVVKALNAGDGKEVWSVNLGEKDGWFSRASAQLSGGVTVSGGHVYI 124
Query: 90 NVTVAVVVAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCT 149
A V A++ S+G W T++ S+ +S V + T
Sbjct: 125 GSEKAQVYALNTSDGTTAWQTKVAGEALSRPVVSDGVVL------------------IHT 166
Query: 150 FRGSLAKLDVRNGRIIWQTYMLPDNGGKRG------GYSGAAVWGSSPAIDVIRRQKQN- 202
G L L+ +G I W + + RG + A V G + + + Q+
Sbjct: 167 SNGQLQALNEADGAIKWTVNLDMPSLSLRGESAPATAFGAAIVGGDNGRVSAVLMQQGQM 226
Query: 203 ------NQTTKPTHPDQCISSDI-------------YANSIVALDIDSGRIAWAKPLGGY 243
+Q T PT D+ D Y ++ ALD+ SG+I W + LG
Sbjct: 227 IWQQRISQATGPTEIDRLSDVDTTPVIVNGVVYALAYNGNLTALDLRSGQIMWKRELGSV 286
Query: 244 DIF 246
+ F
Sbjct: 287 NDF 289
Score = 42.7 bits (99), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 61/155 (39%), Gaps = 30/155 (19%)
Query: 32 WSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLS----KLTGLSGTGI 87
W + + P V++GVV + NG L A+N +GA+ W NL L G S
Sbjct: 143 WQTKVAGEALSRPVVSDGVVLIHTSNGQLQALNEADGAIKWTVNLDMPSLSLRGESAPAT 202
Query: 88 VVNVTVA-----VVVAVSRSNGELVWSTQI-------DPRPRSQITMSGSVYMGAFYVGL 135
+ V AV G+++W +I + S + + + G Y
Sbjct: 203 AFGAAIVGGDNGRVSAVLMQQGQMIWQQRISQATGPTEIDRLSDVDTTPVIVNGVVY--- 259
Query: 136 SSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYM 170
+ G+L LD+R+G+I+W+ +
Sbjct: 260 -----------ALAYNGNLTALDLRSGQIMWKREL 283
Score = 39.7 bits (91), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 61/131 (46%), Gaps = 19/131 (14%)
Query: 39 DISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG--LSGTGIVVNVTVAVV 96
D+ TP + NGVVY ++NG L A++ +G ++W++ L + + G I + V
Sbjct: 246 DVDTTPVIVNGVVYALAYNGNLTALDLRSGQIMWKRELGSVNDFIVDGNRIYLVDQNDRV 305
Query: 97 VAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAK 156
+A++ G +W TQ D R + S +Y G VG S G L
Sbjct: 306 LALTTDGGVTLW-TQSDLLHR--LLTSPVLYNGNLVVGDS--------------EGYLHW 348
Query: 157 LDVRNGRIIWQ 167
++V +GR + Q
Sbjct: 349 INVDDGRFVAQ 359
>gi|338738726|ref|YP_004675688.1| PQQ-linked dehydrogenase [Hyphomicrobium sp. MC1]
gi|337759289|emb|CCB65118.1| putative PQQ-linked dehydrogenase precursor [Hyphomicrobium sp.
MC1]
Length = 606
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 75/358 (20%), Positives = 132/358 (36%), Gaps = 81/358 (22%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAG--KDISATPAVANGVVYFPS-WN 57
W GD RY+ + I V L++ W+F G + P V V+Y S +
Sbjct: 36 WAQQSGDYAGTRYSKLD-QITTENVGQLKVAWTFSTGVLRGHEGGPLVIGDVMYLHSAFP 94
Query: 58 GYLYAVN-AFNGALIWE---------------QNLSKLTGLSGTGIVVNVTVAVVVAVSR 101
+YA+N A +IW+ +++ + I ++ +VA+
Sbjct: 95 NIVYALNLADEQKIIWKYVPKQDPSVIPVMCCDTVNRGVQYAEGKIFLHQADTALVALDA 154
Query: 102 SNGELVWSTQIDPRPRSQITMSGS--VYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDV 159
G+ +W +D P+ T +G+ V +G+S E + R + D+
Sbjct: 155 KTGKELWKV-VDGDPKKGETGTGAPLVTKDKVIIGISGAEFGV--------RCHVTAYDI 205
Query: 160 RNGRIIWQTY-MLPDN-------------------------GGKRGGYSGAAVWGS---S 190
G+ +W+ Y M PD+ G + G + WG
Sbjct: 206 NTGKKVWRAYSMGPDSDILVDPEKTMSLGKPVGKDSSLKTWNGDQWKIGGGSTWGYMAFD 265
Query: 191 PAIDVIRRQKQNNQTTKPTH---PDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFY 247
P +++I N T P PD ++ ++ A D+D+G WA + +D
Sbjct: 266 PDLNLIYYGTGNPSTWNPAQRAGPDGKPIDQKWSMTMFARDVDTGIAKWAYQMTPFD--- 322
Query: 248 FTCLVPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGD 305
D D P+L T+ G+ R V V ++GF + +DR +G+
Sbjct: 323 ---------------EWDYDGINEPILATLDIKGQERKVAVHFDRNGFGYTWDRVTGE 365
>gi|359400845|ref|ZP_09193822.1| alcohol dehydrogenase [Novosphingobium pentaromativorans US6-1]
gi|357597884|gb|EHJ59625.1| alcohol dehydrogenase [Novosphingobium pentaromativorans US6-1]
Length = 721
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 76/348 (21%), Positives = 122/348 (35%), Gaps = 68/348 (19%)
Query: 1 WLNHGGDLNNRRYA-YGEVLINPVTVRNLRLRWSFYAGKDISATPAVANGVVYFPSWNGY 59
W ++GG + Y+ GEV V L + P +GV+YF
Sbjct: 56 WPSYGGTYDEWHYSPLGEVNAGTVDRLGLVAALDLPETHNAGTVPLAVDGVIYFTVDQSI 115
Query: 60 LYAVNAFNGALIWE---QNLSKLTGLS---GTG----------IVVNVTVAVVVAVSRSN 103
+ A + L+W Q + + GLS G G I V T ++A+
Sbjct: 116 VRAFDVKTKKLLWTFNPQVMKRGEGLSLRQGWGPRGIAWWDGKIYVGTTDGRLIAIDAKT 175
Query: 104 GELVWSTQ-IDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNG 162
G+ WSTQ D I+ ++ G +G + RG + D + G
Sbjct: 176 GKQRWSTQTFDFAGGGYISGPPRIFDGLVLIGFGGAD-------YGNIRGYVTAYDAQTG 228
Query: 163 RIIWQTYMLPDNGG--------------------KRGGYSGAAVWGS---SPAIDVIRRQ 199
R +W+ Y +P N K GG G VW + P +D++
Sbjct: 229 RKVWRFYTVPGNPADGFENEAMRMAAKTWKGEWWKYGG--GGTVWNAMTYDPELDLVYIG 286
Query: 200 KQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCP 259
N +++ SIVALD +G W +
Sbjct: 287 VGNGSPWNQAVRSPGGGDNLFLASIVALDAKTGEYRW------------------HYQVN 328
Query: 260 PGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
PG + D + T++ +G+ R V+ K+GF + DR +G +I
Sbjct: 329 PGESWDYTATMDMQIATVTIDGKPRKVLFQAPKNGFFYVIDRSNGKLI 376
>gi|338983844|ref|ZP_08632994.1| Pyrrolo-quinoline quinone [Acidiphilium sp. PM]
gi|338207226|gb|EGO95213.1| Pyrrolo-quinoline quinone [Acidiphilium sp. PM]
Length = 570
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 76/331 (22%), Positives = 133/331 (40%), Gaps = 59/331 (17%)
Query: 10 NRRYAYGE----VLINPVTVRNLRLRWSFYAGKDI----SATPAVANGVVYFPSWNGYLY 61
NR YA + IN V +L+ WS A DI TP V ++ + +L
Sbjct: 53 NRSYAGDDYAPFAQINTKNVASLKPAWS-SAKIDIPNGFEGTPIVNGDYMFATTPLDHLI 111
Query: 62 AVNAFNGALIWEQN--LSKLTGLSGTGIVVNVTVAV-------------VVAVSRSNGEL 106
A NA G +WE + L K + V N VAV V+A+ + G++
Sbjct: 112 AFNAKTGQKLWEYDYDLPKTALKTVCCDVNNRGVAVYGNEVFMGTLDNHVLALDATTGKV 171
Query: 107 VWSTQID-PRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRII 165
+W+ ++ P I+ + + G +G E RG + LD + G+++
Sbjct: 172 LWNVALEKPGIGYSISEAPMIVDGKVIIGSGGGEYGA--------RGFIVGLDAQTGKLL 223
Query: 166 WQTYMLP---DNGGKRGGYSGAAVWGSSPAIDVIRRQKQNNQTTKPTHPDQCISS----- 217
W+TY +P + GGK G SP + K +P ++S
Sbjct: 224 WKTYTIPSPSEPGGKTWPAGAYKHGGGSPWMTGTYDPKTKQLFWGVGNPGPWLASMRPGN 283
Query: 218 DIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTI 277
++Y++S++A+D ++G I W D + D D L I
Sbjct: 284 NLYSDSVIAIDPNTGAIKWHYQYTRNDTW------------------DYDGVNTAQLADI 325
Query: 278 STNGRFRDVVVAVQKSGFAWAFDRDSGDIIW 308
+ G+ +V ++G+ +A +R++G +I+
Sbjct: 326 TYKGKPYHALVEANRNGYFYAINRETGKLIY 356
>gi|338999401|ref|ZP_08638047.1| pyrrolo-quinoline quinone [Halomonas sp. TD01]
gi|338763714|gb|EGP18700.1| pyrrolo-quinoline quinone [Halomonas sp. TD01]
Length = 385
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 50/97 (51%), Gaps = 15/97 (15%)
Query: 29 RLRWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTGLSGTGIV 88
L W F AG + +TP V + VYF S+ G +YAV+ +G+++WE+NL G I
Sbjct: 54 ELVWKFDAGSAVFSTPLVYDSSVYFVSFEGGVYAVDKEDGSVLWEKNLG---GQPSFQIT 110
Query: 89 VNVTVAVV------------VAVSRSNGELVWSTQID 113
+N + +V +A+ R +GE +W + D
Sbjct: 111 LNEDLLLVGYHFNRGDGGYLIAIDRLSGEELWKFEAD 147
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 28/53 (52%)
Query: 20 INPVTVRNLRLRWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIW 72
+N + V N L W F + ++A VYF S++ Y+YAV+ + G L W
Sbjct: 301 MNAMDVENGELIWRFETDDLVGGAASIAGDTVYFGSYDHYMYAVDRYTGELKW 353
>gi|284038812|ref|YP_003388742.1| quinoprotein glucose dehydrogenase [Spirosoma linguale DSM 74]
gi|283818105|gb|ADB39943.1| Quinoprotein glucose dehydrogenase [Spirosoma linguale DSM 74]
Length = 747
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 88/382 (23%), Positives = 141/382 (36%), Gaps = 115/382 (30%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSF---------YAGKDISATPAVANGVV 51
W +GG+ RY+ IN V+NL+L WS+ G DI P V NGV+
Sbjct: 36 WPTYGGNNAGNRYS-KLTQINTGNVKNLKLAWSYDTGDNKDVSQRGMDIQCQPIVVNGVL 94
Query: 52 YFPSWNGYLYAVNAFNGALIWE----------QNLSKLTGL----SGTGIVVNVTV-AVV 96
Y S L+AV+A G W+ + G+ G V TV + +
Sbjct: 95 YGTSPRLKLFAVDAATGKQRWQFDPFADPDTKPRFHPMRGVMYWEDGNDKRVLYTVGSFL 154
Query: 97 VAVSRSNGELVWST----QIDPRP---------------RSQITMSGSVYMGAFYVGLSS 137
A++ G+ V S ++D ++T G +Y G S+
Sbjct: 155 YAINADTGKPVESFGKQGKVDLHEGLGDKETIGHDVENLSIRVTTPGVIYKDLLITG-SA 213
Query: 138 LEEALPADQCCTFRGSLAKLDVRNGRIIWQTYMLP------------DNGGKRGGYS--- 182
+ E A G + +VR G+++W + +P D+ K GG +
Sbjct: 214 VNEGGDAPP-----GYIRAFNVRTGKLVWVFHTIPLPGEYGYETWGKDSYKKLGGANCWA 268
Query: 183 --------GAAVWGS-SPAIDVI--RRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDS 231
G G+ SP++D R QN ++AN ++AL+ +
Sbjct: 269 GMVLDEKRGVVYAGTGSPSVDFYGGARPGQN----------------LFANCVIALNATT 312
Query: 232 GRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTISTNG-----RFRDV 286
G+ W +D++ D D P L+T+ NG R D
Sbjct: 313 GKRIWHFQTVHHDLW------------------DRDLPCPPNLITVKHNGPDGRPRLVDA 354
Query: 287 VVAVQKSGFAWAFDRDSGDIIW 308
V K G+ + FDRD+G ++
Sbjct: 355 VAQATKDGYVFVFDRDTGKPLF 376
>gi|398921429|ref|ZP_10659828.1| PQQ-dependent dehydrogenase, methanol/ethanol family [Pseudomonas
sp. GM49]
gi|398165709|gb|EJM53822.1| PQQ-dependent dehydrogenase, methanol/ethanol family [Pseudomonas
sp. GM49]
Length = 591
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 74/351 (21%), Positives = 135/351 (38%), Gaps = 75/351 (21%)
Query: 2 LNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAG----KDISATPAVANGVVYFPSWN 57
+ +G + +RY+ ++L N V+ LR W+F G + A P V +GV+Y
Sbjct: 45 VTNGLGVQGQRYSPLDIL-NVDNVKELRPAWAFSFGGEKQRGQQAQPMVKDGVMYMTGSY 103
Query: 58 GYLYAVNAFNGALIWEQN-------------LSKLTGLSGTGIVVNVTVAVVVAVSRSNG 104
++AV+A G +W+ + +++ L G ++ A +VA+++ G
Sbjct: 104 SRVFAVDARTGKKLWQYDARLPDDIRPCCDVINRGVALYGDLVIFGTLDAKLVALNKDTG 163
Query: 105 ELVWSTQI-DPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGR 163
++VWS ++ D + I+ + V G G++ E + G + D +NG
Sbjct: 164 KVVWSKKVADHKEGYSISAAPLVINGKLITGVAGGEFGV--------VGKIEAYDPKNGD 215
Query: 164 IIWQT--------YMLPDNGGKRGGYSGAA--------VW---GSSPAIDVIRRQKQN-- 202
++W Y+ D G SG +W G++P + + N
Sbjct: 216 LLWTRPTVEGHMGYVYKDGKAVENGISGGEAGKTWPGDLWKTGGAAPWLGGYYDPETNLL 275
Query: 203 ---NQTTKPTHPDQCISSDIYANSIVALDIDSGRIAW---AKPLGGYDIFYFTCLVPNNP 256
P + ++Y++S +AL+ D G I W + P G+D LV N
Sbjct: 276 LFGTGNPAPWNSHLRPGDNLYSSSRLALNPDDGTIKWHFQSTPHDGWDYDGVNELVSFN- 334
Query: 257 DCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
S G+ ++GF + DR +G I
Sbjct: 335 --------------------YSEGGKEIKAAATADRNGFFYVLDRTNGKFI 365
>gi|374631488|ref|ZP_09703862.1| WD40-like repeat protein [Metallosphaera yellowstonensis MK1]
gi|373525318|gb|EHP70098.1| WD40-like repeat protein [Metallosphaera yellowstonensis MK1]
Length = 525
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 82/183 (44%), Gaps = 33/183 (18%)
Query: 32 WSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWE------QNLSKLTGLSGT 85
W F + TP + NGVVYF +GY+YA+NA +G+ +W N++ L + +
Sbjct: 223 WFFITKSQVMPTPVILNGVVYFDDGDGYMYALNATSGSEVWRIGSFGTANMASLDYANDS 282
Query: 86 GIVV---------NVTVAVVVAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAF--YVG 134
G ++ V + +V VS +NG ++W T P P + + G M + Y+
Sbjct: 283 GRIILIAGFSSAYPVNYSSLVGVS-TNGTVLWRT---PLPFTYDSGPGDAVMSVYGNYL- 337
Query: 135 LSSLEEALPADQCCTFRGSLAK-----LDVRNGRIIW----QTYMLPDNGGKRGGYSGAA 185
+ P F +L + L+V +GR+IW Y+LP G G S +
Sbjct: 338 VDGFISGYPVRHGPLFNETLVREVVMTLNVTDGRLIWLRNVSGYVLPT--GANNGESPSV 395
Query: 186 VWG 188
V G
Sbjct: 396 VKG 398
>gi|284037339|ref|YP_003387269.1| PQQ-dependent enzyme-like protein [Spirosoma linguale DSM 74]
gi|283816632|gb|ADB38470.1| PQQ-dependent enzyme-like protein [Spirosoma linguale DSM 74]
Length = 718
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 78/351 (22%), Positives = 137/351 (39%), Gaps = 78/351 (22%)
Query: 10 NRRYAYGEVLINPVTVRNLRLRWSFYA--GKDISATPAVANGVVYFPSWNGYLYAVNAFN 67
+R + I P V+NL++ W++ A I A P + NGV+Y + A++A
Sbjct: 44 DRSHYSALTQITPENVQNLKVAWTYSAPDSGQIQANPIIVNGVLYSVTPTVQAIALDAAT 103
Query: 68 GALIWE------QNLSKLTGLS------------GTGIVVNVTVAVVVAVSRSNGELVWS 109
G IW+ Q+LS G++ ++ +++ A+ G+ + S
Sbjct: 104 GKEIWKFGSPTKQSLSTSRGVTYWQATKPTAAGESEARILYTVGSLLYALDAKTGKPIPS 163
Query: 110 TQID----------PRPRSQITMS---GSVYMGAFY--VGLSSLEEALPADQCCTFRGSL 154
D + + + +S G+++ V LS +A P G +
Sbjct: 164 FGQDGHIDLHEGLGEQAKDKFVISNTPGTIFEDLIIMPVRLSEGADAAP--------GHV 215
Query: 155 AKLDVRNGRIIWQTYMLPDNGG------KRGGYSGAAVWGSS--PAIDVIRRQKQNNQTT 206
+VR G+++W + +P G + Y V G++ + V R + T
Sbjct: 216 RAFNVRTGKLVWTFHTIPQPGEYGYDTWPKNAYKNTDVGGANNWSGMSVDRPRGILYVPT 275
Query: 207 KPTHPD----QCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGP 262
D S+++AN ++ALD +G+ W +DI+
Sbjct: 276 GSAAFDFYGGNRKGSNLFANCLLALDARTGKRLWHFQAVHHDIW---------------- 319
Query: 263 NLDADFGEAPMLLTISTNG-----RFRDVVVAVQKSGFAWAFDRDSGDIIW 308
D DF P LLT+++ G R D V V KSG FDR +G ++
Sbjct: 320 --DRDFPAPPNLLTVTSKGSDGRSRRVDAVAQVTKSGHVLVFDRVTGKPLF 368
>gi|217977751|ref|YP_002361898.1| PQQ-dependent dehydrogenase [Methylocella silvestris BL2]
gi|217503127|gb|ACK50536.1| PQQ-dependent dehydrogenase, methanol/ethanol family [Methylocella
silvestris BL2]
Length = 601
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 75/356 (21%), Positives = 134/356 (37%), Gaps = 79/356 (22%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAG--KDISATPAVANGVVYFPS-WN 57
W GD +N R++ + N V++L W+F G + P V V+YF + +
Sbjct: 36 WALPTGDYSNHRFSELNQITNK-NVKDLVPVWTFSTGVLRGHEGNPLVIGDVMYFSTPFP 94
Query: 58 GYLYAVNAFN-GALIWE---------------QNLSKLTGLSGTGIVVNVTVAVVVAVSR 101
+YA++ N G ++W+ +++ I++ +VA+
Sbjct: 95 NIVYALDLNNDGKILWKYEPKQDPSVIPVMCCDTVTRGVAYGDGKIILGQADTTLVALDA 154
Query: 102 SNGELVWSTQI-DPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVR 160
G+ VWS + DP T + V +G+S E + RGS+ D++
Sbjct: 155 KTGQPVWSVKNGDPAKGETNTSAPQVIKDNVIIGISGGEFGV--------RGSVTAYDLK 206
Query: 161 NGRIIWQTY-MLPDN------------GGKRGGYSGAAVWGS----------------SP 191
G+ +W+ Y M PD+ G G SG W P
Sbjct: 207 TGKKVWRGYSMGPDSDTLIDPEKTTALGKPVGANSGTNTWEGDQWKIGGGTTWGWISYDP 266
Query: 192 AIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCL 251
++++ N T P Q + ++ S+ A D DSG++ W I+ T
Sbjct: 267 ELNLVYYGSGNPSTWNPV---QRPGDNRWSMSVWARDADSGKVKW--------IYQMT-- 313
Query: 252 VPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
P D D +L G+ R ++ ++GF + DR +G+++
Sbjct: 314 --------PHDEWDYDGINEMVLTEQKIGGKERKLLTHFDRNGFGYTLDRVTGELL 361
>gi|444909580|ref|ZP_21229771.1| Pyrrolo-quinoline quinone [Cystobacter fuscus DSM 2262]
gi|444720529|gb|ELW61313.1| Pyrrolo-quinoline quinone [Cystobacter fuscus DSM 2262]
Length = 376
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 89/222 (40%), Gaps = 46/222 (20%)
Query: 25 VRNL----RLRWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIW----EQNL 76
VR+L R WS+ G A V +G VY P +G L+A++A G L W E+ L
Sbjct: 77 VRSLGAGGREAWSYRVGTLFYAGATVDDGTVYVPGTDGGLHALDARTGQLKWRYAAEEAL 136
Query: 77 SKLTGLSGTGIVVNVTVAVVVAVSRSNGELVWSTQIDPRPRSQI--TMSGSVYMGAFYVG 134
+ ++G ++V + AV R+ GEL W + DP I T + +V +VG
Sbjct: 137 ATAPVIAGDLVLVASQSDTLFAVKRATGELAWLYRRDPPAGFTIHRTSAPAVRGQTAWVG 196
Query: 135 LSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYSGAAVWGSSPAID 194
S GSL LD+ +G + W + + G +SP +D
Sbjct: 197 FSD--------------GSLVSLDLADGGVRWDKLL------AQAGTRQFMDVDTSPVLD 236
Query: 195 VIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAW 236
R + + Y + ALD ++G + W
Sbjct: 237 ASGR----------------VYAASYTGGLYALDAETGDVVW 262
Score = 38.9 bits (89), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 2/86 (2%)
Query: 39 DISATPAV-ANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTGLSGTGIVVNVT-VAVV 96
D+ +P + A+G VY S+ G LYA++A G ++W +T L G VV T +
Sbjct: 228 DVDTSPVLDASGRVYAASYTGGLYALDAETGDVVWTTVAQGITSLMIHGDVVIATGDDRL 287
Query: 97 VAVSRSNGELVWSTQIDPRPRSQITM 122
A NG+L+WS ++ R + +
Sbjct: 288 DAYLADNGKLIWSRALEERAGQETVL 313
>gi|347541186|ref|YP_004848612.1| methanol/ethanol family PQQ-dependent dehydrogenase
[Pseudogulbenkiania sp. NH8B]
gi|345644365|dbj|BAK78198.1| PQQ-dependent dehydrogenase, methanol/ethanol family
[Pseudogulbenkiania sp. NH8B]
Length = 586
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 71/331 (21%), Positives = 118/331 (35%), Gaps = 75/331 (22%)
Query: 20 INPVTVRNLRLRWSFYAG----KDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQN 75
IN TV+ L WSF G + A P V +GV+Y + YAV+A G +WE N
Sbjct: 61 INAKTVKKLVPAWSFSFGGEKQRGQEAQPLVYDGVIYTTASYSRAYAVDARTGKKLWEYN 120
Query: 76 LSKLTGLSGTGIVVNVTVAV-------------VVAVSRSNGELVWSTQI-DPRPRSQIT 121
G+ V+N +A+ +VA+ R G++VW+ ++ + + T
Sbjct: 121 ARLPDGIMPCCDVINRGMAIYGDLVYFGTLDARLVALDRHTGKVVWTKKVGEYKEGYSYT 180
Query: 122 MSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGY 181
+ V G G+S E + G + D G ++W ++ + G G
Sbjct: 181 AAPMVVKGKLITGVSGGEFGI--------VGKVEARDALTGELVWSRPVIEGHMGTLNGK 232
Query: 182 S-------------------GAAVW---GSSPAIDVIRRQKQNNQTTKPTHPDQCISSDI 219
G A W P D I N P + ++
Sbjct: 233 ESTMTGKLNATWEGDQWKQGGGATWLGGTYDPETDTIFMGTGN---PAPWNSWTRKGDNL 289
Query: 220 YANSIVALDIDSGRIAW---AKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLT 276
Y S +A++ D+G I W P G+D +P
Sbjct: 290 YTASTLAINPDNGEIKWHLQTTPHDGWDFDGVNEFIP---------------------FD 328
Query: 277 ISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
+ +G+ ++GF + DR +GD++
Sbjct: 329 LKKDGKVIKAGAKADRNGFFFVADRTNGDLL 359
>gi|398385790|ref|ZP_10543807.1| PQQ-dependent dehydrogenase, methanol/ethanol family [Sphingobium
sp. AP49]
gi|397719822|gb|EJK80386.1| PQQ-dependent dehydrogenase, methanol/ethanol family [Sphingobium
sp. AP49]
Length = 692
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 69/329 (20%), Positives = 123/329 (37%), Gaps = 68/329 (20%)
Query: 20 INPVTVRNLRLRWSFYAGKDIS--ATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQN-- 75
I+ + L L WS ++S ATP G++YF G +YAV+ G LIW+ +
Sbjct: 54 ISTANIDKLGLAWSLDLDGEVSLEATPLAVGGILYFSGSYGAVYAVDGATGKLIWKYDPE 113
Query: 76 ---LSKLTGLSGTGI-----------VVNVTVAVVVAVSRSNGELVWSTQIDPRPRSQIT 121
+S G G+ + V ++A+ G + W+ P P + +
Sbjct: 114 IWKVSPARQAMGMGVNRGVAYDDGRVFIGVLDGRLIALDAKTGTVEWTVNTLP-PGTMHS 172
Query: 122 MSGS--VYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNGGKRG 179
++G+ + G +G + RG + D + G W+ + +P + +
Sbjct: 173 LTGAPRTFKGKVIIGNGGAD--------IGQRGFVTAYDQKTGAQAWRFWTVPGSPEQNA 224
Query: 180 GY------------------SGAAVWGS---SPAIDVIRRQKQNNQTTKPTHPDQCISSD 218
G +G VW P ++ I N P +
Sbjct: 225 GDPTMDMAARTWNGQYWKTGTGGTVWNGMTFDPELNRIYLGVGNAGPYDPEKRSPGGGDN 284
Query: 219 IYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTIS 278
++ SIVALD DSG+ W + + + + N+ A TI
Sbjct: 285 LFVASIVALDADSGKYIWHYQQNPRESWDYKAVA----------NMIA--------ATIP 326
Query: 279 TNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
+G+ R V++ +GF + DR++G +I
Sbjct: 327 IDGKPRKVLMQQPTNGFFYVLDRETGKLI 355
>gi|365886916|ref|ZP_09425811.1| Quinoprotein ethanol dehydrogenase [Bradyrhizobium sp. STM 3809]
gi|365337550|emb|CCD98342.1| Quinoprotein ethanol dehydrogenase [Bradyrhizobium sp. STM 3809]
Length = 563
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 81/344 (23%), Positives = 132/344 (38%), Gaps = 65/344 (18%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAG--KDISATPAVANGVVYFPSWNG 58
W G D N R++ + IN L L +SF + ++P V +Y S G
Sbjct: 33 WAMAGHDYGNTRFSPLKE-INTENAGKLSLVYSFSLASLRSNESSPIVIGNTLYVSSSWG 91
Query: 59 --YLYAVNAFNGALIW----------------EQNLSKLTGLSGTGIVVNVTVAVVVAVS 100
Y+YA++A GA W + N +T G + V + A+
Sbjct: 92 PKYVYALDAATGARKWTYEPDIPDDVLQYACCDVNNRGVTFAEGK-LFVGRLDGKLTALD 150
Query: 101 RSNGELVWSTQI-DPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDV 159
+ G+ +W+T++ D + S IT V G E + RGSL D+
Sbjct: 151 AATGKELWTTKVVDYKQGSVITSPPLVVRDKVITGFGGGEYGV--------RGSLQAFDL 202
Query: 160 RNGRIIWQTYMLPDNG--------GKRGGYSGAAVW--GS-SPAIDVIRRQKQN----NQ 204
+G+ +WQTY +P G G G + G A W GS P D + N N
Sbjct: 203 NSGKQLWQTYTVPAPGEPGSDTWKGDTGLHGGGAAWLVGSYDPKTDTVYWGTSNPGPWNT 262
Query: 205 TTKPT-HPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPN 263
+ T + D +++Y S +A+D +SG I W + P
Sbjct: 263 AVRSTGNGDFGKLTNLYTASTLAIDPNSGAIKW------------------HIQGTPADA 304
Query: 264 LDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
D D +L + G ++ ++GF + +R++G +I
Sbjct: 305 WDYDGVNEALLADLKIGGATVPTLMKADRNGFFFVANRETGKVI 348
>gi|398824692|ref|ZP_10583014.1| glucose dehydrogenase, partial [Bradyrhizobium sp. YR681]
gi|398224678|gb|EJN10978.1| glucose dehydrogenase, partial [Bradyrhizobium sp. YR681]
Length = 588
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 41/89 (46%), Gaps = 18/89 (20%)
Query: 220 YANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTIST 279
+ANS+VAL I+SG + WA +D++ D D P L + T
Sbjct: 287 HANSVVALRIESGELVWAFQTVHHDVW------------------DYDLASQPTLTRLDT 328
Query: 280 NGRFRDVVVAVQKSGFAWAFDRDSGDIIW 308
RDVV+ K GF + DRD+G +W
Sbjct: 329 GEGQRDVVIQPSKQGFVFVLDRDTGKPVW 357
>gi|116619675|ref|YP_821831.1| pyrrolo-quinoline quinone [Candidatus Solibacter usitatus
Ellin6076]
gi|116222837|gb|ABJ81546.1| Pyrrolo-quinoline quinone [Candidatus Solibacter usitatus
Ellin6076]
Length = 530
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 77/340 (22%), Positives = 126/340 (37%), Gaps = 69/340 (20%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWS--FYAGK---------DISATPAVANG 49
W + GD + +RY IN V L L W+ F AG I +TP + NG
Sbjct: 34 WPTYNGDYSGQRYV-PLTQINAANVHTLSLNWATRFAAGGGGGGGRGGVQIKSTPLMVNG 92
Query: 50 VVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG---------LSGTGIVVNVTVAVVVAVS 100
++YF + N ++A +A G +W TG + G + + +V++
Sbjct: 93 ILYFTAPNN-VWAADARTGRELWHYQYPPNTGSTIGNRGVGMWGNWLYFETPDSNLVSLD 151
Query: 101 RSNGELVWSTQI-DPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDV 159
G+ W I DP+ T++ + VG+ P G + D
Sbjct: 152 ARTGKERWKVSIADPKLDYTSTVAPVIIGNHVIVGIGGDHLDNP--------GFVQSRDP 203
Query: 160 RNGRIIWQTYMLPDNGGKRGGYSGAAVWGSSPAIDVIRRQKQNNQTTKPT---------H 210
G + W+ + P R G G W A Q T P +
Sbjct: 204 ETGALQWKWWTTP-----RKGEPGIETWPDEYASAHGTGQAWIPGTYDPELNLYIVGTGN 258
Query: 211 PDQCISS------DIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNL 264
P+ ++ ++Y SIVA++ D+G++AW YF P
Sbjct: 259 PNPVMAEKSRKGDNLYTCSIVAINPDTGKLAW----------YF--------QPSPHDTH 300
Query: 265 DADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSG 304
D D E P+L +G+ R +V ++G+ + DR +G
Sbjct: 301 DWDAVETPILFDGVIDGQKRKLVAQASRNGYFFVLDRATG 340
>gi|404450793|ref|ZP_11015771.1| quinoprotein glucose dehydrogenase [Indibacter alkaliphilus LW1]
gi|403763573|gb|EJZ24521.1| quinoprotein glucose dehydrogenase [Indibacter alkaliphilus LW1]
Length = 706
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 74/333 (22%), Positives = 122/333 (36%), Gaps = 74/333 (22%)
Query: 20 INPVTVRNLRLRWSFYAGK--DISATPAVANGVVYFPSWNGYLYAVNAFNGALIW----- 72
IN V L W ++ G I P + +GV+Y + +A++A +G IW
Sbjct: 48 INRENVSQLSKAWEYHTGDSGQIQCNPIIIDGVLYGMTATTRPFAIDAASGKEIWRLPTE 107
Query: 73 -EQNLSKLTGLS--GTG-------------IVVNVTVAVVVAVSRSNGELVWSTQIDPRP 116
S GLS G G ++ +V NG++ + + +
Sbjct: 108 DHDQFSTSRGLSYWGNGKDNRIYYTKGEWLYALHAKDGTLVESFGENGKVSLKSGLGKQA 167
Query: 117 RSQITMS---GSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYMLPD 173
++ +S G++Y + L E A G + +V G + W + +P
Sbjct: 168 DQKMVISNAPGTIYKDLIIMPLRVSEGTDAA------MGHIQAFNVITGALEWVFHTIPK 221
Query: 174 NG-----------GKRGGYSGAAVWGSSPAIDVIRRQKQNNQTTKPT-------HPDQCI 215
G K GA W A+D Q PT +
Sbjct: 222 PGEFGFDTWPEEAHKNTRVGGANNWAGM-ALDT-----QRGIIYIPTGSAAYDFYGKDRP 275
Query: 216 SSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLL 275
+++AN+++ALD +G W + +DI LD D AP LL
Sbjct: 276 GQNLFANTLLALDAATGNRIWHYQIVHHDI------------------LDRDLPSAPNLL 317
Query: 276 TISTNGRFRDVVVAVQKSGFAWAFDRDSGDIIW 308
TI G+ DVV K G+ + FDR++G+ ++
Sbjct: 318 TIHVAGKQVDVVTQTTKHGYVFVFDRETGEPVF 350
>gi|374314270|ref|YP_005060699.1| Subunit of Outer Membrane Protein Assembly Complex: BamB [Serratia
symbiotica str. 'Cinara cedri']
gi|363988496|gb|AEW44687.1| Subunit of Outer Membrane Protein Assembly Complex: BamB [Serratia
symbiotica str. 'Cinara cedri']
Length = 399
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 67/142 (47%), Gaps = 19/142 (13%)
Query: 36 AGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLS----KLTGLSGTGIVVNV 91
AG+ IS P ++NG+V+ + NG L A+NA NG + W NL L G S + V
Sbjct: 155 AGEAISC-PVISNGMVFIHTSNGNLQALNASNGKVRWTINLDMPFLSLRGESAPAVAFGV 213
Query: 92 TV-----AVVVAVSRSNGELVWSTQI-DPRPRSQITMSGSVYMGAFYVGLSSLEEALPAD 145
+ V A+ G+L+W +I P QI V + E+ + A
Sbjct: 214 IIIGDDNGYVNAILMETGQLIWRQRISQPSSSDQIAHLNDVDTTPVII-----EDIVYA- 267
Query: 146 QCCTFRGSLAKLDVRNGRIIWQ 167
+ G+L LD+R+GRII+Q
Sbjct: 268 --LGYNGNLTALDLRSGRIIFQ 287
>gi|452752758|ref|ZP_21952498.1| Outer membrane protein YfgL [alpha proteobacterium JLT2015]
gi|451959830|gb|EMD82246.1| Outer membrane protein YfgL [alpha proteobacterium JLT2015]
Length = 443
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 74/163 (45%), Gaps = 14/163 (8%)
Query: 6 GDLNNRRYAYGEVLINPVTVRNLRLRWSFYAGKDISATPAVAN-GVVYFPSWNGYLYAVN 64
G+L R G + + R + S A DI A+P + + G VY G L A+
Sbjct: 257 GELTAVRMENGRTVWQDIIARTGQTT-SLSALSDIDASPIIDDDGRVYAMGHGGRLVALQ 315
Query: 65 AFNGALIWEQNLSKLTG--LSGTGIVVNVTVAVVVAVSRSNGELVWSTQI----DPRPRS 118
G IWEQN+ + L+G I + A +VAVS+S+G + W +Q+ DP R
Sbjct: 316 LAGGQRIWEQNVGGIAQPWLAGDWIFAVSSDAELVAVSKSDGRIRWVSQLPQWRDPEDRK 375
Query: 119 -QITMSGSVYMGAFYVGLSSLE----EALPADQCCTFRGSLAK 156
+IT G V G + L+S E A P D TF+ K
Sbjct: 376 GRITYRGPVLAGD-RLWLTSSEGQIIAASPQDGSVTFQAEAGK 417
>gi|289580378|ref|YP_003478844.1| pyrrolo-quinoline quinone [Natrialba magadii ATCC 43099]
gi|448284047|ref|ZP_21475312.1| pyrrolo-quinoline quinone [Natrialba magadii ATCC 43099]
gi|289529931|gb|ADD04282.1| Pyrrolo-quinoline quinone [Natrialba magadii ATCC 43099]
gi|445572142|gb|ELY26684.1| pyrrolo-quinoline quinone [Natrialba magadii ATCC 43099]
Length = 415
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 61/106 (57%), Gaps = 7/106 (6%)
Query: 32 WSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIW----EQNLSKLTGLSGTGI 87
W+F + ++A+P VA+GVVY S +GYLYA++A +G L+W E ++ + ++ +
Sbjct: 163 WTFETDEGVAASPTVADGVVYAGSNDGYLYALDADDGELLWAFEAEDSVMRAPAVADGTV 222
Query: 88 VVNVTVAVVVAVS-RSNGELV-WSTQIDPRPRSQITMS-GSVYMGA 130
T + A+ + GE W + D R +S+ T++ G VY+G+
Sbjct: 223 YFGSTDNFLYAIDIDTEGERARWRVETDDRIQSRPTVADGVVYVGS 268
Score = 44.7 bits (104), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 54/112 (48%), Gaps = 15/112 (13%)
Query: 31 RWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTGLSGTGIVVN 90
RWSF G+ I+++PAV +G VY S +G +YA+ A Q T + G+ +
Sbjct: 118 RWSFATGESITSSPAVVDGTVYVGSMDGTVYALPADEDGT---QPDPTWTFETDEGVAAS 174
Query: 91 VTVA-----------VVVAVSRSNGELVWSTQI-DPRPRSQITMSGSVYMGA 130
TVA + A+ +GEL+W+ + D R+ G+VY G+
Sbjct: 175 PTVADGVVYAGSNDGYLYALDADDGELLWAFEAEDSVMRAPAVADGTVYFGS 226
Score = 42.0 bits (97), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 92/238 (38%), Gaps = 42/238 (17%)
Query: 27 NLRLRWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIW-----EQNLSKLTG 81
+ W F + ++PAV +G VY S +G LYA+ A +G W E S
Sbjct: 74 EVETLWKFPTDDSVYSSPAVVDGTVYVGSMDGSLYAIGADDGDERWSFATGESITSSPAV 133
Query: 82 LSGTGIVVNVTVAVVVAVSRSNGELVWSTQIDP----RPRSQITMSGSVYMGAFYVGLSS 137
+ GT V ++ V + +G TQ DP + S +V G Y G +
Sbjct: 134 VDGTVYVGSMDGTVYALPADEDG-----TQPDPTWTFETDEGVAASPTVADGVVYAGSND 188
Query: 138 LEEALPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYSGAAVW-GSSP----A 192
G L LD +G ++W + D+ + + V+ GS+ A
Sbjct: 189 --------------GYLYALDADDGELLW-AFEAEDSVMRAPAVADGTVYFGSTDNFLYA 233
Query: 193 IDVI--------RRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGG 242
ID+ R + + ++PT D + + + A++ DSG I W GG
Sbjct: 234 IDIDTEGERARWRVETDDRIQSRPTVADGVVYVGSNDDLLYAVEADSGDIRWTFQTGG 291
Score = 39.3 bits (90), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 58/135 (42%), Gaps = 25/135 (18%)
Query: 19 LINPVTVRNLRLRWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNG---------- 68
L+ V + +RW+F G ++A+PAV VY S++ Y++A+++ G
Sbjct: 272 LLYAVEADSGDIRWTFQTGGSVTASPAVTEHAVYAASFDNYVHALSSTAGPAPDDDDETA 331
Query: 69 ---ALIWEQNLSKLTGLSGTGIVVNVTVAV------VVAVSRSNGELVWSTQIDPRPRSQ 119
W + S G+ + +VV + V V ++S GE W Q S
Sbjct: 332 SPETYFWAE--SGFQGVRSSPVVVGDALYVGNENGAVRSLSAETGETNWQFQT----ESW 385
Query: 120 ITMSGSVYMGAFYVG 134
+ S +V G YVG
Sbjct: 386 VAASPAVVDGVVYVG 400
>gi|91773514|ref|YP_566206.1| Pyrrolo-quinoline quinone [Methanococcoides burtonii DSM 6242]
gi|91712529|gb|ABE52456.1| pyrrolo-quinoline quinone-dependent enzyme [Methanococcoides
burtonii DSM 6242]
Length = 809
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 96/252 (38%), Gaps = 55/252 (21%)
Query: 6 GDLNNRRYAYGEVLINPVTVRNLRLRWSFYAGKDISATPAVANGVVYFPSW------NGY 59
G+ + Y + EV + W+F + ATPA N VYF +W G
Sbjct: 530 GEWDGNYYCFDEVTGEEI--------WNFSTEGNAQATPAYDNERVYFTTWIYGQTYGGN 581
Query: 60 LYAVNAFNGALIWEQNL---SKLTGLSGTGIVVNVTV------AVVVAVSRSNGELVWST 110
+Y V+A G L+W+QN + + + G +V VT + A++++NG ++W
Sbjct: 582 VYCVDANTGELLWDQNEIINNCCSSPTIYGDIVYVTTYNFYGEGEIYALNKNNGSILWKE 641
Query: 111 QIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYM 170
I + G+VY+ G S L+ D G + W T
Sbjct: 642 DIHSTDSTPAVAYGNVYVAGGCYGYSDLQTYC--------------FDAITGELKWNT-- 685
Query: 171 LPDNGGKRGGYSGAAVWGSSPAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDID 230
P++G GG W S A I +K T T D N ALD
Sbjct: 686 TPEDG--IGG------WLCSVA---IADEKIFVGTAFETEDDYTG-----LNGTCALDAF 729
Query: 231 SGRIAWAKPLGG 242
+G + W P GG
Sbjct: 730 TGELIWNSPFGG 741
Score = 38.5 bits (88), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 37/80 (46%), Gaps = 7/80 (8%)
Query: 40 ISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTGLSGT-------GIVVNVT 92
I+ P +A +VY + NG ++A N NGALIW S + L + + V
Sbjct: 69 INVPPVIAGDLVYTHTTNGSVWAFNKHNGALIWRSKTSGGSALQSSTPAYGDGKLFVASN 128
Query: 93 VAVVVAVSRSNGELVWSTQI 112
+ A S+GE +WS +
Sbjct: 129 SGDLFAFDASSGEELWSEHV 148
>gi|409399671|ref|ZP_11249937.1| putative pyrrolo-quinoline quinone [Acidocella sp. MX-AZ02]
gi|409131204|gb|EKN00917.1| putative pyrrolo-quinoline quinone [Acidocella sp. MX-AZ02]
Length = 550
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 83/338 (24%), Positives = 128/338 (37%), Gaps = 66/338 (19%)
Query: 1 WLNHGGDLNNRRYAYGEVL-------INPVTVRNLRLRWSFYAGKDISATPAVANGVVYF 53
WL G N R++ + + + PV + SF TP V NGV+Y
Sbjct: 59 WLGSGDGYENHRFSPLKQINDTNIAKLAPVAIAQTGYTASF------ETTPIVVNGVMYI 112
Query: 54 --PSWNGY--LYAVNAFNGALIWEQNLSK-LTGLSGTGIVVNVTVA-----------VVV 97
P N L A+NA G +W + L + + TVA +V
Sbjct: 113 TTPMVNSKQALIAMNAATGETLWTYTYTDGLNQICCGPVNRGATVANGNVYFLTLDNSLV 172
Query: 98 AVSRSNGELVWSTQI-DPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAK 156
V+ + G+LVW + D + TM+ VY G +G + E + RG +A
Sbjct: 173 DVNANTGDLVWKVNVADAQAGYSETMAPIVYKGQVIIGSAGGEWPI--------RGFVAS 224
Query: 157 LDVRNGRIIWQTYMLPDN---GGKRGGYSGAAVWGSSPAIDVIRRQKQNNQTTKPTHPD- 212
D G+ W+ D G G VW ++PAID +R T P +PD
Sbjct: 225 YDAATGKQSWRFNTTNDKTSWAGDSWKTGGGTVW-TTPAIDT-KRGLLIFSTGNP-NPDL 281
Query: 213 ---QCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFG 269
Q ++Y +SIVAL I G +AW +D++ D D
Sbjct: 282 DGSQRAGDNLYTDSIVALHIKDGTLAWYYQEVPHDVW------------------DYDAV 323
Query: 270 EAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
+L +G+ K+ F + +R++G +I
Sbjct: 324 SNVVLFDTMDHGKMVPAAGQAGKTAFFYIVNRETGKLI 361
>gi|400405782|ref|YP_006588641.1| Beta-barrel assembly machine subunit BamB [secondary endosymbiont
of Ctenarytaina eucalypti]
gi|400364145|gb|AFP85213.1| Beta-barrel assembly machine subunit BamB [secondary endosymbiont
of Ctenarytaina eucalypti]
Length = 393
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 80/167 (47%), Gaps = 26/167 (15%)
Query: 26 RNLRLRWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLS----KLTG 81
RN R W ++ +TP V++GVV + NG L A++ +G + W NL KL G
Sbjct: 138 RNGRRVWETRVSGEVLSTPVVSDGVVLVHTGNGMLQALHETDGTVKWSVNLDLPPLKLRG 197
Query: 82 LS------GTGIVVNVTVAVVVAVSRSNGELVWSTQI-DPRPRSQITMSGSVYMGAFYVG 134
S GT ++V +V AV + G+L+W +I PR ++I V V
Sbjct: 198 DSAPTTAFGT-VIVGGNNGLVRAVLINQGQLIWQKRIAKPRGITEIARINDVKSTPLLV- 255
Query: 135 LSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQ------TYMLPDNG 175
+ + AL ++G LA LD+ +G++IW T +L D+G
Sbjct: 256 -NGVVYAL------AYQGYLAALDLISGQVIWSRDIGSVTNLLGDSG 295
Score = 45.4 bits (106), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 42/73 (57%), Gaps = 2/73 (2%)
Query: 39 DISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTGLSGTG--IVVNVTVAVV 96
D+ +TP + NGVVY ++ GYL A++ +G +IW +++ +T L G I + V
Sbjct: 247 DVKSTPLLVNGVVYALAYQGYLAALDLISGQVIWSRDIGSVTNLLGDSGRIYLVDQNDHV 306
Query: 97 VAVSRSNGELVWS 109
+AV+ +G +W
Sbjct: 307 IAVNSQDGRSLWQ 319
>gi|383759915|ref|YP_005438901.1| methanol dehydrogenase-like protein XoxF [Rubrivivax gelatinosus
IL144]
gi|381380585|dbj|BAL97402.1| methanol dehydrogenase-like protein XoxF [Rubrivivax gelatinosus
IL144]
Length = 605
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 67/356 (18%), Positives = 137/356 (38%), Gaps = 76/356 (21%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAG--KDISATPAVANGVVYFPS-WN 57
W GD+ N+R++ + IN V +++ W+F G + +P V +G +Y S +
Sbjct: 41 WAMQAGDMYNQRHSQLK-QINTGNVGKMQVAWTFSTGVLRGHEGSPLVIDGTMYLHSPFP 99
Query: 58 GYLYAVNAFNGALIWE---------------QNLSKLTGLSGTGIVVNVTVAVVVAVSRS 102
++A++ + ++W+ +++ + + + + +VA+
Sbjct: 100 NKVWALDLESQKILWKYEPKQDPAVIPQMCCDTVNRGLAYAEGKVFLQQADSNLVALDAK 159
Query: 103 NGELVWSTQI-DPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRN 161
G++VW+ + DP+ + T + V+ G+S E + RG LA D+
Sbjct: 160 TGKVVWTVKNGDPKLGAVNTNAPHVFKDKVITGISGGEWGV--------RGFLAAYDINT 211
Query: 162 GRIIWQTY-------ML------------------PDNG-----GKRGGYSGAAVWGSSP 191
G+ +W+ Y ML PD+ G + G WG
Sbjct: 212 GKQVWKGYSVGPDAEMLIDPKTTTTWMDGAVKPVGPDSSLKTWKGDQWKIGGGTTWGWYS 271
Query: 192 AIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCL 251
+ + +P Q + + SI + D+D+G++ W + YD + F +
Sbjct: 272 YDKALNQVFYGTGNPSTWNPAQRPGDNKWTMSIWSRDVDTGKVKWVYQMTPYDEWDFDGI 331
Query: 252 VPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
+L I+ G+ +V ++GFA+ DR +G ++
Sbjct: 332 ------------------NEMILADINVKGKPTKALVHFDRNGFAYTLDRTNGALL 369
>gi|171059782|ref|YP_001792131.1| methanol/ethanol family PQQ-dependent dehydrogenase [Leptothrix
cholodnii SP-6]
gi|170777227|gb|ACB35366.1| PQQ-dependent dehydrogenase, methanol/ethanol family [Leptothrix
cholodnii SP-6]
Length = 606
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 68/359 (18%), Positives = 137/359 (38%), Gaps = 82/359 (22%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAG--KDISATPAVANGVVYFPS-WN 57
W GD+ N+RY+ + IN V +++ W+F G + +P V +G +Y S +
Sbjct: 42 WAMQAGDMFNQRYSKLK-QINKGNVGKMQVAWTFSTGVLRGHEGSPLVIDGTMYLHSPFP 100
Query: 58 GYLYAVNAFNGALIWE---------------QNLSKLTGLSGTGIVVNVTVAVVVAVSRS 102
++A++ ++W+ +++ + + + + +VA+
Sbjct: 101 NKVFAIDIDTQKILWKYEPKQDPAVIPQMCCDTVNRGLAYAEGKVFLQQADSNLVALDAK 160
Query: 103 NGELVWSTQI-DPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRN 161
+G++VW+ + DP+ + T + V+ G+S E + RG LA D+
Sbjct: 161 SGKVVWTVKNGDPKLGAVNTNAPHVFKDKVITGISGGEWGV--------RGFLAAYDINT 212
Query: 162 GRIIWQTYML-PDN-----------------------------GGKRGGYSGAAVWG--- 188
GR +W+ Y + PD+ G + G WG
Sbjct: 213 GRQVWKGYSVGPDSEMLIDPDKTTTWMDGAVKPVGKDSSLKTWQGDQWKIGGGTTWGWYS 272
Query: 189 SSPAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYF 248
A + + N T P Q + ++ SI + D+D+G++ W + +D + F
Sbjct: 273 YDKATNAVYYGTGNPSTWNPA---QRPGDNKWSMSIWSRDVDTGKVNWVYQMTPFDEWDF 329
Query: 249 TCLVPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
+ +L I G+ +V ++GF + DR +G ++
Sbjct: 330 DGI------------------NEMILADIPVKGKMTKALVHFDRNGFGYTLDRVTGALL 370
>gi|419958884|ref|ZP_14474942.1| outer membrane biogenesis protein BamB [Enterobacter cloacae subsp.
cloacae GS1]
gi|388606187|gb|EIM35399.1| outer membrane biogenesis protein BamB [Enterobacter cloacae subsp.
cloacae GS1]
Length = 392
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 95/237 (40%), Gaps = 46/237 (19%)
Query: 44 PAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG--------------LSGTGIVV 89
PA A+GVVY G + A+NA +G +W NL++ G ++G + V
Sbjct: 65 PAFADGVVYAADRKGTVKALNADDGKEVWSINLAEKDGWFSRKPALLSGGLTVTGGHVYV 124
Query: 90 NVTVAVVVAVSRSNGELVWSTQIDPRPRSQITMS-GSVYMGAFYVGLSSLEEA------- 141
A V A++ S+G + W T + S+ +S G V + L +L EA
Sbjct: 125 GSEKAQVYALNASDGSVAWQTTVAGESLSRPVVSDGLVLIHTSNGQLQALNEADGLVKWT 184
Query: 142 ----LPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYS------GAAVWGS-- 189
+PA + RG A I+ GG G S G +W
Sbjct: 185 VNLDMPA---LSLRGESAPATAFGAAIV---------GGDNGRVSAVLMQQGQMIWQQRI 232
Query: 190 SPAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIF 246
S A + ++ T P D + + Y ++ ALD+ SG+I W + LG + F
Sbjct: 233 SQATGSTEIDRLSDVDTTPVIVDGVVYALAYNGNLTALDLRSGQIMWKRELGSVNDF 289
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 62/131 (47%), Gaps = 19/131 (14%)
Query: 39 DISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG--LSGTGIVVNVTVAVV 96
D+ TP + +GVVY ++NG L A++ +G ++W++ L + + G I + +
Sbjct: 246 DVDTTPVIVDGVVYALAYNGNLTALDLRSGQIMWKRELGSVNDFIVDGNRIYMVDQNDRL 305
Query: 97 VAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAK 156
+A+S G +W TQ D R + + ++Y G+ VG S G +
Sbjct: 306 LALSTEGGVTLW-TQSDLLHR--LLTAPALYNGSLVVGDS--------------EGYMHW 348
Query: 157 LDVRNGRIIWQ 167
+D NGR + Q
Sbjct: 349 IDPENGRFVAQ 359
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 64/153 (41%), Gaps = 35/153 (22%)
Query: 36 AGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLS----KLTGLSGTGIVVNV 91
AG+ +S P V++G+V + NG L A+N +G + W NL L G S
Sbjct: 148 AGESLS-RPVVSDGLVLIHTSNGQLQALNEADGLVKWTVNLDMPALSLRGESAPATAFGA 206
Query: 92 TVA-----VVVAVSRSNGELVW---------STQIDPRPRSQITMSGSVYMGAFYVGLSS 137
+ V AV G+++W ST+ID S + + + G Y
Sbjct: 207 AIVGGDNGRVSAVLMQQGQMIWQQRISQATGSTEID--RLSDVDTTPVIVDGVVY----- 259
Query: 138 LEEALPADQCCTFRGSLAKLDVRNGRIIWQTYM 170
+ G+L LD+R+G+I+W+ +
Sbjct: 260 ---------ALAYNGNLTALDLRSGQIMWKREL 283
>gi|383625264|ref|ZP_09949670.1| pyrrolo-quinoline quinone [Halobiforma lacisalsi AJ5]
gi|448700130|ref|ZP_21699351.1| pyrrolo-quinoline quinone [Halobiforma lacisalsi AJ5]
gi|445780032|gb|EMA30943.1| pyrrolo-quinoline quinone [Halobiforma lacisalsi AJ5]
Length = 417
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 93/230 (40%), Gaps = 28/230 (12%)
Query: 25 VRNLRLRWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWE----QNLSKLT 80
+ RW F + ++PAV +G+VY S +G+LYA+ A +G W ++S
Sbjct: 80 IDGAETRWEFTTESAVYSSPAVLDGLVYVGSSDGHLYAIGADSGDEEWAYRTGDDVSSSP 139
Query: 81 GLSGTGIVVNVTVAVVVAVSRSNGELVWSTQIDPRPRSQITM-SGSVYMGA-----FYVG 134
++ +VV + A++ +G+ W+ Q S T+ G+VY+G+ +
Sbjct: 140 AVADGTVVVGSHDGTIYALAADSGDEAWTFQTGEMVASSPTIVDGTVYVGSNDGSLYAFS 199
Query: 135 LSSLEEALPADQCCTFRGSLAKLD--VRNGRIIWQTYMLPDNGGKRGGYSGAAVWGSSPA 192
L EE D + + + A D G Y + + SG W
Sbjct: 200 LEEGEEEWAFDTAGSIQRAPAIADGTAYVGSTDGHLYAVDAD-------SGDEEWA---- 248
Query: 193 IDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGG 242
+ + ++PT D + +S+ AL+ DSG + W P G
Sbjct: 249 -----FETDDWIQSRPTTADGAVYVGSNDDSLYALEADSGDLRWEFPTDG 293
Score = 38.9 bits (89), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 50/114 (43%), Gaps = 7/114 (6%)
Query: 24 TVRNLRLRWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNL-----SK 78
++ W+F I PA+A+G Y S +G+LYAV+A +G W S+
Sbjct: 199 SLEEGEEEWAFDTAGSIQRAPAIADGTAYVGSTDGHLYAVDADSGDEEWAFETDDWIQSR 258
Query: 79 LTGLSGTGIVVNVTVAVVVAVSRSNGELVWSTQIDPRPRSQITMS-GSVYMGAF 131
T G + V + A+ +G+L W D S ++ G V+ G++
Sbjct: 259 PTTADGA-VYVGSNDDSLYALEADSGDLRWEFPTDGSVTSSPAVADGVVFFGSY 311
Score = 37.7 bits (86), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 26/35 (74%)
Query: 30 LRWSFYAGKDISATPAVANGVVYFPSWNGYLYAVN 64
LRW F ++++PAVA+GVV+F S++ +YAV+
Sbjct: 285 LRWEFPTDGSVTSSPAVADGVVFFGSYDTRVYAVS 319
>gi|402824177|ref|ZP_10873559.1| alcohol dehydrogenase [Sphingomonas sp. LH128]
gi|402262296|gb|EJU12277.1| alcohol dehydrogenase [Sphingomonas sp. LH128]
Length = 713
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 74/337 (21%), Positives = 128/337 (37%), Gaps = 69/337 (20%)
Query: 15 YGEVLINPV------TVRNLRLRWSFYAGKDISAT-PAVANGVVYFPSWNGYLYAVNAFN 67
YGE +P+ V++L L W+ AT P G VY S + A++ +
Sbjct: 59 YGEQHYSPLDQVNAGNVKDLGLVWAVDLPAGNPATGPIEVGGTVYLASGYSVVRAIDVAS 118
Query: 68 GALIWEQN----------LSKLTGLSGTG-----IVVNVTVAVVVAVSRSNGELVWSTQ- 111
G + WE + L + G G ++ ++A+ G+ VW+ Q
Sbjct: 119 GKVKWEHDPKAPEASGIRLRQGWGSRGIAYWNHKVITATQDGRLIALDEKTGKPVWTVQT 178
Query: 112 IDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYML 171
++ I+ V+ G +G + +E+ RG + D +G+ +W+ Y +
Sbjct: 179 LEEGAPMFISGPPRVFDGKVIIGNAGSDES-------AVRGFVTAFDADSGKPLWKFYTV 231
Query: 172 P--------DNGGKRGGYSGAAVW----GSSPAIDVIRRQKQNNQTTKPT-------HPD 212
P D K + + W G + I K N+Q T H
Sbjct: 232 PGDPAKGFEDETQKMAAKTWSGDWWKYGGGGSVWNAITYDKANDQILLGTGNGAPWNHKI 291
Query: 213 QCISS--DIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGE 270
+ + +++ SIVALD +G+ W Y I PG + D +
Sbjct: 292 RSLGKGDNLFVCSIVALDAKTGKYKWH-----YQIN-------------PGESWDFNAAM 333
Query: 271 APMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
L ++ +G+ R VV+ K+GF + DR G +I
Sbjct: 334 DMELADLTIDGKPRQVVMTAPKNGFYYVIDRKDGKLI 370
>gi|295097945|emb|CBK87035.1| outer membrane assembly lipoprotein YfgL [Enterobacter cloacae
subsp. cloacae NCTC 9394]
Length = 361
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 95/237 (40%), Gaps = 46/237 (19%)
Query: 44 PAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG--------------LSGTGIVV 89
PA A+GVVY G + A+NA +G +W NL++ G ++G + V
Sbjct: 34 PAFADGVVYAADRKGTVKALNADDGKEVWSINLAEKDGWFSRKPALLSGGLTVAGGHVYV 93
Query: 90 NVTVAVVVAVSRSNGELVWSTQIDPRPRSQITMS-GSVYMGAFYVGLSSLEEA------- 141
A V A++ S+G + W T + S+ +S G V + L +L EA
Sbjct: 94 GSEKAQVYALNASDGSVAWQTTVAGESLSRPVVSDGLVLIHTSNGQLQALNEADGLVKWT 153
Query: 142 ----LPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYS------GAAVWGS-- 189
+PA + RG A I+ GG G S G +W
Sbjct: 154 VNLDMPA---LSLRGESAPATAFGAAIV---------GGDNGRVSAVLMQQGQMIWQQRI 201
Query: 190 SPAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIF 246
S A + ++ T P D + + Y ++ ALD+ SG+I W + LG + F
Sbjct: 202 SQATGSTEIDRLSDVDTTPVIVDGVVYALAYNGNLTALDLRSGQIMWKRELGSVNDF 258
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 64/153 (41%), Gaps = 35/153 (22%)
Query: 36 AGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLS----KLTGLSGTGIVVNV 91
AG+ +S P V++G+V + NG L A+N +G + W NL L G S
Sbjct: 117 AGESLS-RPVVSDGLVLIHTSNGQLQALNEADGLVKWTVNLDMPALSLRGESAPATAFGA 175
Query: 92 TVA-----VVVAVSRSNGELVW---------STQIDPRPRSQITMSGSVYMGAFYVGLSS 137
+ V AV G+++W ST+ID S + + + G Y
Sbjct: 176 AIVGGDNGRVSAVLMQQGQMIWQQRISQATGSTEID--RLSDVDTTPVIVDGVVY----- 228
Query: 138 LEEALPADQCCTFRGSLAKLDVRNGRIIWQTYM 170
+ G+L LD+R+G+I+W+ +
Sbjct: 229 ---------ALAYNGNLTALDLRSGQIMWKREL 252
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 62/131 (47%), Gaps = 19/131 (14%)
Query: 39 DISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG--LSGTGIVVNVTVAVV 96
D+ TP + +GVVY ++NG L A++ +G ++W++ L + + G I + +
Sbjct: 215 DVDTTPVIVDGVVYALAYNGNLTALDLRSGQIMWKRELGSVNDFIVDGNRIYMVDQNDRL 274
Query: 97 VAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAK 156
+A+S G +W TQ D R + + ++Y G+ VG S G +
Sbjct: 275 LALSTEGGVTLW-TQSDLLHR--LLTAPALYNGSLVVGDS--------------EGYMHW 317
Query: 157 LDVRNGRIIWQ 167
+D NGR + Q
Sbjct: 318 IDPENGRFVAQ 328
>gi|425082677|ref|ZP_18485774.1| lipoprotein yfgL [Klebsiella pneumoniae subsp. pneumoniae WGLW2]
gi|428936465|ref|ZP_19009869.1| outer membrane biogenesis protein BamB [Klebsiella pneumoniae
JHCK1]
gi|405600929|gb|EKB74094.1| lipoprotein yfgL [Klebsiella pneumoniae subsp. pneumoniae WGLW2]
gi|426298275|gb|EKV60693.1| outer membrane biogenesis protein BamB [Klebsiella pneumoniae
JHCK1]
Length = 392
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 94/226 (41%), Gaps = 24/226 (10%)
Query: 44 PAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG--------------LSGTGIVV 89
PA A+GVVY G + A+NA +G +W NL++ G +SG + +
Sbjct: 65 PAFADGVVYAADRKGTVKALNADDGKEVWSVNLAEKDGWFSRTPALLSGGVTVSGGHVYI 124
Query: 90 NVTVAVVVAVSRSNGELVWSTQIDPRPRSQITMS-GSVYMGAFYVGLSSLEEALPADQCC 148
A + A++ S+G + W T++ S+ +S G V + L +L E A +
Sbjct: 125 GSEKAQLYALNTSDGTVAWQTRVAGEALSRPVVSDGMVLVHTSNGQLQALNETDGAVK-W 183
Query: 149 TFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYS------GAAVWGS--SPAIDVIRRQK 200
T + L +R Y GG G S G +W S A +
Sbjct: 184 TVNLDMPALSLRGESAPATAYGAAIVGGDNGRVSAVLMQQGQMIWQQRISTATGPTEIDR 243
Query: 201 QNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIF 246
N+ T P + + + Y ++ ALD+ SG+I W + LG + F
Sbjct: 244 LNDVDTTPIIVNGVVYALAYNGNLTALDLRSGQIMWKRELGSVNDF 289
Score = 38.1 bits (87), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 63/139 (45%), Gaps = 13/139 (9%)
Query: 39 DISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG--LSGTGIVVNVTVAVV 96
D+ TP + NGVVY ++NG L A++ +G ++W++ L + + G I + +
Sbjct: 246 DVDTTPIIVNGVVYALAYNGNLTALDLRSGQIMWKRELGSVNDFIVDGNRIYLVDQNDRL 305
Query: 97 VAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSS--------LEEALPADQCC 148
+A++ G +W TQ D R + + +Y G VG S + A Q
Sbjct: 306 LALTTDGGVTLW-TQSDLLHR--LLTAPVLYNGNLVVGDSEGYMHWINPEDGHFVAQQKV 362
Query: 149 TFRGSLAKLDVRNGRIIWQ 167
G L V +GR++ Q
Sbjct: 363 DSSGFLTDPVVADGRLLIQ 381
>gi|398864124|ref|ZP_10619663.1| PQQ-dependent dehydrogenase, methanol/ethanol family [Pseudomonas
sp. GM78]
gi|398245681|gb|EJN31192.1| PQQ-dependent dehydrogenase, methanol/ethanol family [Pseudomonas
sp. GM78]
Length = 591
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 69/334 (20%), Positives = 127/334 (38%), Gaps = 74/334 (22%)
Query: 19 LINPVTVRNLRLRWSFYAG----KDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQ 74
++N V++LR W+F G + A P V +GV+Y ++AV+A G +W+
Sbjct: 61 ILNVDNVKDLRPAWAFSFGGEKQRGQQAQPMVKDGVMYMTGSYSRVFAVDARTGKKLWQY 120
Query: 75 N-------------LSKLTGLSGTGIVVNVTVAVVVAVSRSNGELVWSTQI-DPRPRSQI 120
+ +++ L G ++ A +VA+++ G++VWS ++ D + I
Sbjct: 121 DARLPDDIRPCCDVINRGVALYGDLVIFGTLDAKLVALNKDTGKVVWSKKVADHKEGYSI 180
Query: 121 TMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQT--------YMLP 172
+ + V G G++ E + G + D +NG ++W Y+
Sbjct: 181 SAAPLVINGKLITGVAGGEFGV--------VGKIEAYDPKNGTLLWSRPTVEGHMGYVYK 232
Query: 173 DNGGKRGGYSGAA--------VW---GSSPAIDVIRRQKQN-----NQTTKPTHPDQCIS 216
D G SG +W G++P + + N P +
Sbjct: 233 DGKAVENGISGGEAGKSWPGDLWKTGGAAPWLGGYYDPETNLLLFGTGNPAPWNSHLRPG 292
Query: 217 SDIYANSIVALDIDSGRIAW---AKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPM 273
++Y++S +AL+ D G I W + P G+D LV N
Sbjct: 293 DNLYSSSRLALNPDDGTIKWHFQSTPHDGWDYDGVNELVSFN------------------ 334
Query: 274 LLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
+ G+ ++GF + DR +G I
Sbjct: 335 ---YTEGGKEIKAAATADRNGFFYVLDRTNGKFI 365
>gi|420366699|ref|ZP_14867532.1| outer membrane assembly lipoprotein YfgL [Shigella flexneri
1235-66]
gi|391324006|gb|EIQ80621.1| outer membrane assembly lipoprotein YfgL [Shigella flexneri
1235-66]
Length = 392
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 97/243 (39%), Gaps = 58/243 (23%)
Query: 44 PAVANGVVYFPSWNGYLYAVNAFNGALIWEQNL-----------SKLTG---LSGTGIVV 89
PA+A+ VVY S G + A+NA +G +W NL ++L+G +SG + +
Sbjct: 65 PALADNVVYAASRAGVVKALNADDGKEVWSVNLGEKDGWFSRASAQLSGGVTVSGGHVYI 124
Query: 90 NVTVAVVVAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCT 149
A V A++ S+G W T++ S+ +S + + T
Sbjct: 125 GSEKAQVYALNTSDGTTAWQTKVAGEALSRPVVSDGMVL------------------IHT 166
Query: 150 FRGSLAKLDVRNGRIIWQTYMLPDNGGKRG------GYSGAAVWGSSPAIDVIRR----- 198
G L L+ +G I W + + RG + A V G + + +
Sbjct: 167 SNGQLQALNEADGAIKWTVNLDMPSLSLRGESAPATAFGAAIVGGDNGRVSAVLMQQGQM 226
Query: 199 --QKQNNQTTKPTHPDQCISSDI-------------YANSIVALDIDSGRIAWAKPLGGY 243
Q++ +Q T PT D+ D Y ++ ALD+ SG+I W + LG
Sbjct: 227 IWQQRISQATGPTEIDRLSDVDTTPVIVNGVVYALAYNGNLTALDLRSGQIMWKRELGSV 286
Query: 244 DIF 246
+ F
Sbjct: 287 NDF 289
Score = 41.6 bits (96), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 62/131 (47%), Gaps = 19/131 (14%)
Query: 39 DISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG--LSGTGIVVNVTVAVV 96
D+ TP + NGVVY ++NG L A++ +G ++W++ L + + G I + V
Sbjct: 246 DVDTTPVIVNGVVYALAYNGNLTALDLRSGQIMWKRELGSVNDFIVDGNRIYLVDQNDRV 305
Query: 97 VAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAK 156
+A++ G +W TQ D R + S ++Y G VG S G L
Sbjct: 306 LALTTDGGVTLW-TQSDLLHR--LLTSPALYNGNLVVGDS--------------EGYLHW 348
Query: 157 LDVRNGRIIWQ 167
++V +GR + Q
Sbjct: 349 INVEDGRFVAQ 359
>gi|334125106|ref|ZP_08499100.1| lipoprotein YfgL [Enterobacter hormaechei ATCC 49162]
gi|333387676|gb|EGK58870.1| lipoprotein YfgL [Enterobacter hormaechei ATCC 49162]
Length = 392
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 95/237 (40%), Gaps = 46/237 (19%)
Query: 44 PAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG--------------LSGTGIVV 89
PA A+GVVY G + A+NA +G +W NL++ G ++G + V
Sbjct: 65 PAYADGVVYAADRKGTVKALNADDGKEVWSINLAEKDGWFSRKPALLSGGLTVAGGHVYV 124
Query: 90 NVTVAVVVAVSRSNGELVWSTQIDPRPRSQITMS-GSVYMGAFYVGLSSLEEA------- 141
A V A++ S+G + W T + S+ +S G V + L +L EA
Sbjct: 125 GSEKAQVYALNASDGSVAWQTTVAGESLSRPVVSDGMVLIHTSNGQLQALNEADGLVKWT 184
Query: 142 ----LPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYS------GAAVWGS-- 189
+PA + RG A I+ GG G S G +W
Sbjct: 185 VNLDMPA---LSLRGESAPATAFGAAIV---------GGDNGRVSAVLMQQGQMIWQQRI 232
Query: 190 SPAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIF 246
S A + ++ T P D + + Y ++ ALD+ SG+I W + LG + F
Sbjct: 233 SQATGSTEIDRLSDVDTTPVIVDGVVYALAYNGNLTALDLRSGQIMWKRELGSVNDF 289
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 62/131 (47%), Gaps = 19/131 (14%)
Query: 39 DISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG--LSGTGIVVNVTVAVV 96
D+ TP + +GVVY ++NG L A++ +G ++W++ L + + G I + +
Sbjct: 246 DVDTTPVIVDGVVYALAYNGNLTALDLRSGQIMWKRELGSVNDFIVDGNRIYMVDQNDRL 305
Query: 97 VAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAK 156
+A+S G +W TQ D R + + ++Y G+ VG S G +
Sbjct: 306 LALSTEGGVTLW-TQSDLLHR--LLTAPALYNGSLVVGDS--------------EGYMHW 348
Query: 157 LDVRNGRIIWQ 167
+D NGR + Q
Sbjct: 349 IDPENGRFVAQ 359
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 64/153 (41%), Gaps = 35/153 (22%)
Query: 36 AGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLS----KLTGLSGTGIVVNV 91
AG+ +S P V++G+V + NG L A+N +G + W NL L G S
Sbjct: 148 AGESLS-RPVVSDGMVLIHTSNGQLQALNEADGLVKWTVNLDMPALSLRGESAPATAFGA 206
Query: 92 TVA-----VVVAVSRSNGELVW---------STQIDPRPRSQITMSGSVYMGAFYVGLSS 137
+ V AV G+++W ST+ID S + + + G Y
Sbjct: 207 AIVGGDNGRVSAVLMQQGQMIWQQRISQATGSTEID--RLSDVDTTPVIVDGVVY----- 259
Query: 138 LEEALPADQCCTFRGSLAKLDVRNGRIIWQTYM 170
+ G+L LD+R+G+I+W+ +
Sbjct: 260 ---------ALAYNGNLTALDLRSGQIMWKREL 283
>gi|407717492|ref|YP_006838772.1| alcohol dehydrogenase large subunit [Cycloclasticus sp. P1]
gi|407257828|gb|AFT68269.1| Alcohol dehydrogenase large subunit [Cycloclasticus sp. P1]
Length = 676
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 73/330 (22%), Positives = 127/330 (38%), Gaps = 56/330 (16%)
Query: 4 HGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAGKD--ISATPAVANGVVYFPSWNGYLY 61
+G + N +RY+ IN V L+ W G + P V NGV+Y S N Y
Sbjct: 58 YGLEQNLQRYS-PLTQINDGNVHQLKPSWVLSLGDNRGQQTQPLVINGVMYITSHNA-TY 115
Query: 62 AVNAFNGALIWEQNLS------KLTGLSGTGIVVNVTVAV-------VVAVSRSNGELVW 108
AV+A +G IW+ + G++ G V ++A++ NG+ +W
Sbjct: 116 AVDARSGRQIWKSIIQYPAETLTCCGVTNRGATWYNDVLYRATPDNRLLALNPKNGKTIW 175
Query: 109 STQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQT 168
R+ G A V + + + + RG L D + G +W+
Sbjct: 176 EK------RTAEIEFGYSMTSAPLVANNVVITGVAGGEFGA-RGFLDGWDPKTGEHLWRF 228
Query: 169 YMLPDNG--------GKRGGYSGAAVW--GS-SPAIDVIRRQKQNNQTTKPTHPDQCISS 217
+ +P G G + G W GS +D++ N P + +
Sbjct: 229 HTIPKPGEKGSESWQGDEWEHGGGPTWLIGSYDKELDLVYWGVGNKS---PWNMREGAKD 285
Query: 218 DIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTI 277
++Y S++A+ +G + W + FT P D D P+L I
Sbjct: 286 NLYTQSMLAIRPKTGELIWH--------YQFT----------PNDGFDYDAVNDPILTEI 327
Query: 278 STNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
+G+ R V++ ++GF + DR +G ++
Sbjct: 328 EVDGKQRKVLIQANRNGFFYVLDRSTGKLL 357
>gi|238895967|ref|YP_002920703.1| outer membrane protein assembly complex subunit YfgL [Klebsiella
pneumoniae subsp. pneumoniae NTUH-K2044]
gi|262040249|ref|ZP_06013500.1| lipoprotein YfgL [Klebsiella pneumoniae subsp. rhinoscleromatis
ATCC 13884]
gi|330007782|ref|ZP_08306079.1| outer membrane assembly lipoprotein YfgL [Klebsiella sp. MS 92-3]
gi|365143334|ref|ZP_09348254.1| lipoprotein yfgL [Klebsiella sp. 4_1_44FAA]
gi|378980073|ref|YP_005228214.1| putative dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
HS11286]
gi|386035994|ref|YP_005955907.1| outer membrane biogenesis protein BamB [Klebsiella pneumoniae KCTC
2242]
gi|402779533|ref|YP_006635079.1| outer membrane protein YfgL [Klebsiella pneumoniae subsp.
pneumoniae 1084]
gi|419764234|ref|ZP_14290474.1| outer membrane assembly lipoprotein YfgL [Klebsiella pneumoniae
subsp. pneumoniae DSM 30104]
gi|419975695|ref|ZP_14491102.1| outer membrane biogenesis protein BamB [Klebsiella pneumoniae
subsp. pneumoniae KPNIH1]
gi|419981602|ref|ZP_14496876.1| outer membrane biogenesis protein BamB [Klebsiella pneumoniae
subsp. pneumoniae KPNIH2]
gi|419986785|ref|ZP_14501913.1| outer membrane biogenesis protein BamB [Klebsiella pneumoniae
subsp. pneumoniae KPNIH4]
gi|419992535|ref|ZP_14507490.1| outer membrane biogenesis protein BamB [Klebsiella pneumoniae
subsp. pneumoniae KPNIH5]
gi|419998758|ref|ZP_14513542.1| outer membrane biogenesis protein BamB [Klebsiella pneumoniae
subsp. pneumoniae KPNIH6]
gi|420004584|ref|ZP_14519219.1| outer membrane biogenesis protein BamB [Klebsiella pneumoniae
subsp. pneumoniae KPNIH7]
gi|420010331|ref|ZP_14524805.1| outer membrane biogenesis protein BamB [Klebsiella pneumoniae
subsp. pneumoniae KPNIH8]
gi|420016463|ref|ZP_14530754.1| outer membrane biogenesis protein BamB [Klebsiella pneumoniae
subsp. pneumoniae KPNIH9]
gi|420022043|ref|ZP_14536216.1| outer membrane biogenesis protein BamB [Klebsiella pneumoniae
subsp. pneumoniae KPNIH10]
gi|420027467|ref|ZP_14541459.1| outer membrane biogenesis protein BamB [Klebsiella pneumoniae
subsp. pneumoniae KPNIH11]
gi|420033388|ref|ZP_14547193.1| outer membrane biogenesis protein BamB [Klebsiella pneumoniae
subsp. pneumoniae KPNIH12]
gi|420039756|ref|ZP_14553384.1| outer membrane biogenesis protein BamB [Klebsiella pneumoniae
subsp. pneumoniae KPNIH14]
gi|420044939|ref|ZP_14558414.1| outer membrane biogenesis protein BamB [Klebsiella pneumoniae
subsp. pneumoniae KPNIH16]
gi|420050806|ref|ZP_14564101.1| outer membrane biogenesis protein BamB [Klebsiella pneumoniae
subsp. pneumoniae KPNIH17]
gi|420056366|ref|ZP_14569523.1| outer membrane biogenesis protein BamB [Klebsiella pneumoniae
subsp. pneumoniae KPNIH18]
gi|420061018|ref|ZP_14574011.1| outer membrane biogenesis protein BamB [Klebsiella pneumoniae
subsp. pneumoniae KPNIH19]
gi|420067729|ref|ZP_14580518.1| outer membrane biogenesis protein BamB [Klebsiella pneumoniae
subsp. pneumoniae KPNIH20]
gi|420073002|ref|ZP_14585634.1| outer membrane biogenesis protein BamB [Klebsiella pneumoniae
subsp. pneumoniae KPNIH21]
gi|420080378|ref|ZP_14592802.1| outer membrane biogenesis protein BamB [Klebsiella pneumoniae
subsp. pneumoniae KPNIH22]
gi|420082548|ref|ZP_14594844.1| outer membrane biogenesis protein BamB [Klebsiella pneumoniae
subsp. pneumoniae KPNIH23]
gi|421911299|ref|ZP_16341062.1| Outer membrane protein YfgL, lipoprotein component of the protein
assembly complex (forms a complex with YaeT, YfiO, and
NlpB) [Klebsiella pneumoniae subsp. pneumoniae
ST258-K26BO]
gi|421917093|ref|ZP_16346657.1| Outer membrane protein YfgL, lipoprotein component of the protein
assembly complex (forms a complex with YaeT, YfiO, and
NlpB) [Klebsiella pneumoniae subsp. pneumoniae
ST258-K28BO]
gi|424831838|ref|ZP_18256566.1| outer membrane assembly lipoprotein YfgL [Klebsiella pneumoniae
subsp. pneumoniae Ecl8]
gi|424932310|ref|ZP_18350682.1| Outer membrane biogenesis protein BamB [Klebsiella pneumoniae
subsp. pneumoniae KpQ3]
gi|425075475|ref|ZP_18478578.1| lipoprotein yfgL [Klebsiella pneumoniae subsp. pneumoniae WGLW1]
gi|425086110|ref|ZP_18489203.1| lipoprotein yfgL [Klebsiella pneumoniae subsp. pneumoniae WGLW3]
gi|425092759|ref|ZP_18495844.1| lipoprotein yfgL [Klebsiella pneumoniae subsp. pneumoniae WGLW5]
gi|428149844|ref|ZP_18997653.1| Outer membrane protein YfgL, lipoprotein component of the protein
assembly complex (forms a complex with YaeT, YfiO, and
NlpB) [Klebsiella pneumoniae subsp. pneumoniae
ST512-K30BO]
gi|428942445|ref|ZP_19015439.1| outer membrane biogenesis protein BamB [Klebsiella pneumoniae
VA360]
gi|449059466|ref|ZP_21737161.1| outer membrane biogenesis protein BamB [Klebsiella pneumoniae
hvKP1]
gi|238548285|dbj|BAH64636.1| putative dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
NTUH-K2044]
gi|259042358|gb|EEW43378.1| lipoprotein YfgL [Klebsiella pneumoniae subsp. rhinoscleromatis
ATCC 13884]
gi|328535326|gb|EGF61811.1| outer membrane assembly lipoprotein YfgL [Klebsiella sp. MS 92-3]
gi|339763122|gb|AEJ99342.1| outer membrane biogenesis protein BamB [Klebsiella pneumoniae KCTC
2242]
gi|363649676|gb|EHL88783.1| lipoprotein yfgL [Klebsiella sp. 4_1_44FAA]
gi|364519484|gb|AEW62612.1| putative dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
HS11286]
gi|397342360|gb|EJJ35522.1| outer membrane biogenesis protein BamB [Klebsiella pneumoniae
subsp. pneumoniae KPNIH1]
gi|397342888|gb|EJJ36043.1| outer membrane biogenesis protein BamB [Klebsiella pneumoniae
subsp. pneumoniae KPNIH2]
gi|397346789|gb|EJJ39901.1| outer membrane biogenesis protein BamB [Klebsiella pneumoniae
subsp. pneumoniae KPNIH4]
gi|397359714|gb|EJJ52405.1| outer membrane biogenesis protein BamB [Klebsiella pneumoniae
subsp. pneumoniae KPNIH6]
gi|397360786|gb|EJJ53458.1| outer membrane biogenesis protein BamB [Klebsiella pneumoniae
subsp. pneumoniae KPNIH5]
gi|397365263|gb|EJJ57888.1| outer membrane biogenesis protein BamB [Klebsiella pneumoniae
subsp. pneumoniae KPNIH7]
gi|397374843|gb|EJJ67157.1| outer membrane biogenesis protein BamB [Klebsiella pneumoniae
subsp. pneumoniae KPNIH9]
gi|397378910|gb|EJJ71113.1| outer membrane biogenesis protein BamB [Klebsiella pneumoniae
subsp. pneumoniae KPNIH8]
gi|397385446|gb|EJJ77542.1| outer membrane biogenesis protein BamB [Klebsiella pneumoniae
subsp. pneumoniae KPNIH10]
gi|397393273|gb|EJJ85035.1| outer membrane biogenesis protein BamB [Klebsiella pneumoniae
subsp. pneumoniae KPNIH11]
gi|397395051|gb|EJJ86765.1| outer membrane biogenesis protein BamB [Klebsiella pneumoniae
subsp. pneumoniae KPNIH12]
gi|397402164|gb|EJJ93775.1| outer membrane biogenesis protein BamB [Klebsiella pneumoniae
subsp. pneumoniae KPNIH14]
gi|397410398|gb|EJK01680.1| outer membrane biogenesis protein BamB [Klebsiella pneumoniae
subsp. pneumoniae KPNIH17]
gi|397410881|gb|EJK02151.1| outer membrane biogenesis protein BamB [Klebsiella pneumoniae
subsp. pneumoniae KPNIH16]
gi|397420623|gb|EJK11683.1| outer membrane biogenesis protein BamB [Klebsiella pneumoniae
subsp. pneumoniae KPNIH18]
gi|397427538|gb|EJK18306.1| outer membrane biogenesis protein BamB [Klebsiella pneumoniae
subsp. pneumoniae KPNIH20]
gi|397431925|gb|EJK22593.1| outer membrane biogenesis protein BamB [Klebsiella pneumoniae
subsp. pneumoniae KPNIH19]
gi|397438496|gb|EJK28994.1| outer membrane biogenesis protein BamB [Klebsiella pneumoniae
subsp. pneumoniae KPNIH21]
gi|397441412|gb|EJK31787.1| outer membrane biogenesis protein BamB [Klebsiella pneumoniae
subsp. pneumoniae KPNIH22]
gi|397452145|gb|EJK42219.1| outer membrane biogenesis protein BamB [Klebsiella pneumoniae
subsp. pneumoniae KPNIH23]
gi|397742817|gb|EJK90035.1| outer membrane assembly lipoprotein YfgL [Klebsiella pneumoniae
subsp. pneumoniae DSM 30104]
gi|402539209|gb|AFQ63358.1| Outer membrane protein YfgL [Klebsiella pneumoniae subsp.
pneumoniae 1084]
gi|405594349|gb|EKB67764.1| lipoprotein yfgL [Klebsiella pneumoniae subsp. pneumoniae WGLW1]
gi|405605643|gb|EKB78672.1| lipoprotein yfgL [Klebsiella pneumoniae subsp. pneumoniae WGLW3]
gi|405611985|gb|EKB84751.1| lipoprotein yfgL [Klebsiella pneumoniae subsp. pneumoniae WGLW5]
gi|407806497|gb|EKF77748.1| Outer membrane biogenesis protein BamB [Klebsiella pneumoniae
subsp. pneumoniae KpQ3]
gi|410114835|emb|CCM83687.1| Outer membrane protein YfgL, lipoprotein component of the protein
assembly complex (forms a complex with YaeT, YfiO, and
NlpB) [Klebsiella pneumoniae subsp. pneumoniae
ST258-K26BO]
gi|410120810|emb|CCM89282.1| Outer membrane protein YfgL, lipoprotein component of the protein
assembly complex (forms a complex with YaeT, YfiO, and
NlpB) [Klebsiella pneumoniae subsp. pneumoniae
ST258-K28BO]
gi|414709275|emb|CCN30979.1| outer membrane assembly lipoprotein YfgL [Klebsiella pneumoniae
subsp. pneumoniae Ecl8]
gi|426298663|gb|EKV61052.1| outer membrane biogenesis protein BamB [Klebsiella pneumoniae
VA360]
gi|427540200|emb|CCM93791.1| Outer membrane protein YfgL, lipoprotein component of the protein
assembly complex (forms a complex with YaeT, YfiO, and
NlpB) [Klebsiella pneumoniae subsp. pneumoniae
ST512-K30BO]
gi|448874751|gb|EMB09783.1| outer membrane biogenesis protein BamB [Klebsiella pneumoniae
hvKP1]
Length = 392
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 94/226 (41%), Gaps = 24/226 (10%)
Query: 44 PAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG--------------LSGTGIVV 89
PA A+GVVY G + A+NA +G +W NL++ G +SG + +
Sbjct: 65 PAFADGVVYAADRKGTVKALNADDGKEVWSVNLAEKDGWFSRTPALLSGGVTVSGGHVYI 124
Query: 90 NVTVAVVVAVSRSNGELVWSTQIDPRPRSQITMS-GSVYMGAFYVGLSSLEEALPADQCC 148
A + A++ S+G + W T++ S+ +S G V + L +L E A +
Sbjct: 125 GSEKAQLYALNTSDGTVAWQTRVAGEALSRPVVSDGMVLVHTSNGQLQALNETDGAVK-W 183
Query: 149 TFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYS------GAAVWGS--SPAIDVIRRQK 200
T + L +R Y GG G S G +W S A +
Sbjct: 184 TVNLDMPALSLRGESAPATAYGAAIVGGDNGRVSAVLMQQGQMIWQQRISTATGPTEIDR 243
Query: 201 QNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIF 246
N+ T P + + + Y ++ ALD+ SG+I W + LG + F
Sbjct: 244 LNDVDTTPIIVNGVVYALAYNGNLTALDLRSGQIMWKRELGSVNDF 289
Score = 38.1 bits (87), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 63/139 (45%), Gaps = 13/139 (9%)
Query: 39 DISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG--LSGTGIVVNVTVAVV 96
D+ TP + NGVVY ++NG L A++ +G ++W++ L + + G I + +
Sbjct: 246 DVDTTPIIVNGVVYALAYNGNLTALDLRSGQIMWKRELGSVNDFIVDGNRIYLVDQNDRL 305
Query: 97 VAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSS--------LEEALPADQCC 148
+A++ G +W TQ D R + + +Y G VG S + A Q
Sbjct: 306 LALTTDGGVTLW-TQSDLLHR--LLTAPVLYNGNLVVGDSEGYMHWVNPEDGHFVAQQKV 362
Query: 149 TFRGSLAKLDVRNGRIIWQ 167
G L V +GR++ Q
Sbjct: 363 DSSGFLTDPVVADGRLLIQ 381
>gi|206577625|ref|YP_002237138.1| outer membrane protein assembly complex subunit YfgL [Klebsiella
pneumoniae 342]
gi|288934097|ref|YP_003438156.1| outer membrane assembly lipoprotein YfgL [Klebsiella variicola
At-22]
gi|290508295|ref|ZP_06547666.1| outer membrane assembly lipoprotein YfgL [Klebsiella sp. 1_1_55]
gi|206566683|gb|ACI08459.1| outer membrane assembly lipoprotein YfgL [Klebsiella pneumoniae
342]
gi|288888826|gb|ADC57144.1| outer membrane assembly lipoprotein YfgL [Klebsiella variicola
At-22]
gi|289777689|gb|EFD85686.1| outer membrane assembly lipoprotein YfgL [Klebsiella sp. 1_1_55]
Length = 392
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 94/226 (41%), Gaps = 24/226 (10%)
Query: 44 PAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG--------------LSGTGIVV 89
PA A+GVVY G + A+NA +G +W NL++ G +SG + +
Sbjct: 65 PAFADGVVYAADRKGTVKALNADDGKEVWSVNLAEKDGWFSRVPALLSGGVTVSGGHVYI 124
Query: 90 NVTVAVVVAVSRSNGELVWSTQIDPRPRSQITMS-GSVYMGAFYVGLSSLEEALPADQCC 148
A + A++ S+G + W T++ S+ +S G V + L +L E A +
Sbjct: 125 GSEKAQLYALNTSDGTVAWQTRVAGEALSRPVVSDGMVLVHTSNGQLQALNETDGAVK-W 183
Query: 149 TFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYS------GAAVWGS--SPAIDVIRRQK 200
T + L +R Y GG G S G +W S A +
Sbjct: 184 TVNLDMPALSLRGESAPATAYGAAIVGGDNGRVSAVLMQQGQMIWQQRISTATGPTEIDR 243
Query: 201 QNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIF 246
N+ T P + + + Y ++ ALD+ SG+I W + LG + F
Sbjct: 244 LNDVDTTPIIVNGVVYALAYNGNLTALDLRSGQIMWKRELGSVNDF 289
Score = 38.1 bits (87), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 63/139 (45%), Gaps = 13/139 (9%)
Query: 39 DISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG--LSGTGIVVNVTVAVV 96
D+ TP + NGVVY ++NG L A++ +G ++W++ L + + G I + +
Sbjct: 246 DVDTTPIIVNGVVYALAYNGNLTALDLRSGQIMWKRELGSVNDFIVDGNRIYLVDQNDRL 305
Query: 97 VAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSS--------LEEALPADQCC 148
+A++ G +W TQ D R + + +Y G VG S + A Q
Sbjct: 306 LALTTDGGVTLW-TQSDLLHR--LLTAPVLYNGNLVVGDSEGYMHWVNPEDGHFVAQQKV 362
Query: 149 TFRGSLAKLDVRNGRIIWQ 167
G L V +GR++ Q
Sbjct: 363 DSSGFLTDPVVADGRLLIQ 381
>gi|448412944|ref|ZP_21576835.1| PQQ repeat protein [Halosimplex carlsbadense 2-9-1]
gi|445667646|gb|ELZ20287.1| PQQ repeat protein [Halosimplex carlsbadense 2-9-1]
Length = 393
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 51/118 (43%), Gaps = 7/118 (5%)
Query: 16 GEVLINPVTVRNLRLRWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIW--- 72
G V +P T +RW + G + PAVA+G VY + Y++AV+A G W
Sbjct: 179 GLVAFDPTT---GEVRWRYRTGLSTARHPAVADGTVYVGGADAYVHAVDAATGDRRWWTK 235
Query: 73 -EQNLSKLTGLSGTGIVVNVTVAVVVAVSRSNGELVWSTQIDPRPRSQITMSGSVYMG 129
+ + + VVA+ + GE+ W ++D RP G VY+G
Sbjct: 236 TATAVETPVAAAHGAVYAGTADGTVVALDGATGEVRWRGEVDDRPERLAVDGGHVYVG 293
Score = 42.0 bits (97), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 51/115 (44%), Gaps = 7/115 (6%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAGKDIS-ATPAVANGVVYFPSWNGY 59
W GD N R + P L ++W+ G I P VA+G VY + +
Sbjct: 44 WPTATGDWRNTRSVPRAAMPEP----PLSIQWTHAVGGHIGIPAPTVADGTVYTTNMDTT 99
Query: 60 LYAVNAFNGALIWEQNLS--KLTGLSGTGIVVNVTVAVVVAVSRSNGELVWSTQI 112
LYAV A G W ++ L ++G + V V + + V R++G+ W+ ++
Sbjct: 100 LYAVGAEEGRARWSARMAGPGLPVVAGDALAVGVDDSHLRGVGRADGDERWTARL 154
>gi|375262227|ref|YP_005021397.1| outer membrane biogenesis protein BamB [Klebsiella oxytoca KCTC
1686]
gi|397659350|ref|YP_006500052.1| outer membrane protein YfgL [Klebsiella oxytoca E718]
gi|402844625|ref|ZP_10892977.1| outer membrane assembly lipoprotein YfgL [Klebsiella sp. OBRC7]
gi|421726696|ref|ZP_16165865.1| outer membrane biogenesis protein BamB [Klebsiella oxytoca M5al]
gi|423104267|ref|ZP_17091969.1| lipoprotein yfgL [Klebsiella oxytoca 10-5242]
gi|423109693|ref|ZP_17097388.1| lipoprotein yfgL [Klebsiella oxytoca 10-5243]
gi|423115567|ref|ZP_17103258.1| lipoprotein yfgL [Klebsiella oxytoca 10-5245]
gi|423125183|ref|ZP_17112862.1| lipoprotein yfgL [Klebsiella oxytoca 10-5250]
gi|365911705|gb|AEX07158.1| outer membrane biogenesis protein BamB [Klebsiella oxytoca KCTC
1686]
gi|376380957|gb|EHS93698.1| lipoprotein yfgL [Klebsiella oxytoca 10-5245]
gi|376381261|gb|EHS93999.1| lipoprotein yfgL [Klebsiella oxytoca 10-5243]
gi|376384130|gb|EHS96856.1| lipoprotein yfgL [Klebsiella oxytoca 10-5242]
gi|376399434|gb|EHT12049.1| lipoprotein yfgL [Klebsiella oxytoca 10-5250]
gi|394343637|gb|AFN29758.1| Outer membrane protein YfgL [Klebsiella oxytoca E718]
gi|402273582|gb|EJU22779.1| outer membrane assembly lipoprotein YfgL [Klebsiella sp. OBRC7]
gi|410372423|gb|EKP27135.1| outer membrane biogenesis protein BamB [Klebsiella oxytoca M5al]
Length = 392
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 93/226 (41%), Gaps = 24/226 (10%)
Query: 44 PAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG--------------LSGTGIVV 89
PA A+GVVY G + A+N+ +G +W NL++ G +SG + +
Sbjct: 65 PAFADGVVYAADRKGTVKALNSGDGKEVWSVNLAEKDGWFSRAPALLSGGVTVSGGHVYI 124
Query: 90 NVTVAVVVAVSRSNGELVWSTQIDPRPRSQITMS-GSVYMGAFYVGLSSLEEALPADQCC 148
A V A++ S+G + W + S+ +S G V + L +L EA A +
Sbjct: 125 GSEKAKVYALNTSDGTVAWEASVAGEAISRPVVSDGMVLIHTTNGQLQALNEADGAVK-W 183
Query: 149 TFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYS------GAAVWGS--SPAIDVIRRQK 200
T + L +R Y GG G S G +W S A +
Sbjct: 184 TVNLDMPALSLRGESAPATAYGAAIVGGDNGRVSAVLMQQGQMIWQQRISTATGPTEIDR 243
Query: 201 QNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIF 246
N+ T P + I + Y ++ ALD+ SG+I W + LG + F
Sbjct: 244 LNDVDTTPVIVNGVIYALAYNGNLTALDLRSGQIMWKRELGSVNDF 289
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 63/151 (41%), Gaps = 31/151 (20%)
Query: 36 AGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLS----KLTGLSGTGIVVNV 91
AG+ IS P V++G+V + NG L A+N +GA+ W NL L G S
Sbjct: 148 AGEAIS-RPVVSDGMVLIHTTNGQLQALNEADGAVKWTVNLDMPALSLRGESAPATAYGA 206
Query: 92 TVA-----VVVAVSRSNGELVWSTQI-------DPRPRSQITMSGSVYMGAFYVGLSSLE 139
+ V AV G+++W +I + + + + + G Y
Sbjct: 207 AIVGGDNGRVSAVLMQQGQMIWQQRISTATGPTEIDRLNDVDTTPVIVNGVIY------- 259
Query: 140 EALPADQCCTFRGSLAKLDVRNGRIIWQTYM 170
+ G+L LD+R+G+I+W+ +
Sbjct: 260 -------ALAYNGNLTALDLRSGQIMWKREL 283
>gi|124266784|ref|YP_001020788.1| quinoprotein ethanol dehydrogenase [Methylibium petroleiphilum PM1]
gi|124259559|gb|ABM94553.1| putative quinoprotein ethanol dehydrogenase precursor [Methylibium
petroleiphilum PM1]
Length = 583
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 83/353 (23%), Positives = 132/353 (37%), Gaps = 91/353 (25%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRW--SFYAGKDISATPAVANGVVYFPSWNG 58
WL++G D N R++ I V+ L +W SF + + V NG +Y +
Sbjct: 68 WLHYGKDYQNTRFS-ALTQITTDNVKKLVPKWNLSFGVNEAQDSQTTVVNGRIYVTASQN 126
Query: 59 YLYAVNAFNGALIW--EQNLSKLTGLSGTGIVVNVTVAV-------------VVAVSRSN 103
+++++ G ++W E++L G VN VAV VVA++ +
Sbjct: 127 KVFSLDGVTGKMLWKYERSLPGDLGPKLCCDAVNRGVAVYKDMVFMATLDTHVVALNNTT 186
Query: 104 GELVWSTQIDPRPRSQITMSGS-VYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNG 162
G++VW ++ +I S V G VG +S + G + LD G
Sbjct: 187 GQVVWERKMGDYQTGEIYTSMPLVAKGMVIVGSASGDVGANV-------GRITALDPATG 239
Query: 163 RIIWQTYMLP------------DNGGKRGG-----------YSGAAVWG---SSPAIDVI 196
IW+ P ++ K GG + +WG SPA D
Sbjct: 240 NTIWEFKTRPTSADHPQAKTWANDSWKTGGGAAWLTGTYDAKTNTVLWGVGNPSPAFDPS 299
Query: 197 RRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNP 256
R+ N +Y NS VALD D+G+I + F +T
Sbjct: 300 VRKGDN----------------LYTNSTVALDADTGKIKYH--------FQYT------- 328
Query: 257 DCPPGPNLDADF-GEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDIIW 308
PN D+ G M+L G R V + ++G ++ DR +G W
Sbjct: 329 -----PNDAWDYDGNNEMILVDDDKG--RKVWLHGDRNGHLYSIDRTNGKCNW 374
>gi|421845435|ref|ZP_16278589.1| outer membrane biogenesis protein BamB [Citrobacter freundii ATCC
8090 = MTCC 1658]
gi|411773338|gb|EKS56897.1| outer membrane biogenesis protein BamB [Citrobacter freundii ATCC
8090 = MTCC 1658]
gi|455641369|gb|EMF20540.1| outer membrane biogenesis protein BamB [Citrobacter freundii GTC
09479]
Length = 392
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 93/243 (38%), Gaps = 58/243 (23%)
Query: 44 PAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG--------------LSGTGIVV 89
PA+A+ VVY S G + A+NA +G +W NL + G ++G + +
Sbjct: 65 PALADNVVYAASRAGVVKALNAGDGKEVWSVNLGEKDGWFSRASAQLSGGVTVAGGHVYI 124
Query: 90 NVTVAVVVAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCT 149
A V A++ S+G W T++ S+ +S V + T
Sbjct: 125 GSEKAQVYALNTSDGTTAWQTKVAGEALSRPVVSDGVVL------------------IHT 166
Query: 150 FRGSLAKLDVRNGRIIWQTYMLPDNGGKRG------GYSGAAVWGSSPAIDVIRRQKQN- 202
G L L+ +G I W + + RG + A V G + + + Q+
Sbjct: 167 SNGQLQALNEADGAIKWTVNLDMPSLSLRGESAPATAFGAAIVGGDNGRVSAVLMQQGQM 226
Query: 203 ------NQTTKPTHPDQCISSDI-------------YANSIVALDIDSGRIAWAKPLGGY 243
+Q T PT D+ D Y ++ ALD+ SG+I W + LG
Sbjct: 227 IWQQRISQATGPTEIDRLSDVDTTPVIVNGVVYALAYNGNLTALDLRSGQIMWKRELGSV 286
Query: 244 DIF 246
+ F
Sbjct: 287 NDF 289
Score = 42.7 bits (99), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 61/155 (39%), Gaps = 30/155 (19%)
Query: 32 WSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLS----KLTGLSGTGI 87
W + + P V++GVV + NG L A+N +GA+ W NL L G S
Sbjct: 143 WQTKVAGEALSRPVVSDGVVLIHTSNGQLQALNEADGAIKWTVNLDMPSLSLRGESAPAT 202
Query: 88 VVNVTVA-----VVVAVSRSNGELVWSTQI-------DPRPRSQITMSGSVYMGAFYVGL 135
+ V AV G+++W +I + S + + + G Y
Sbjct: 203 AFGAAIVGGDNGRVSAVLMQQGQMIWQQRISQATGPTEIDRLSDVDTTPVIVNGVVY--- 259
Query: 136 SSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYM 170
+ G+L LD+R+G+I+W+ +
Sbjct: 260 -----------ALAYNGNLTALDLRSGQIMWKREL 283
Score = 39.7 bits (91), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 61/131 (46%), Gaps = 19/131 (14%)
Query: 39 DISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG--LSGTGIVVNVTVAVV 96
D+ TP + NGVVY ++NG L A++ +G ++W++ L + + G I + V
Sbjct: 246 DVDTTPVIVNGVVYALAYNGNLTALDLRSGQIMWKRELGSVNDFIVDGNRIYLVDQNDRV 305
Query: 97 VAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAK 156
+A++ G +W TQ D R + S +Y G VG S G L
Sbjct: 306 LALTTDGGVTLW-TQSDLLHR--LLTSPVLYNGNLVVGDS--------------EGYLHW 348
Query: 157 LDVRNGRIIWQ 167
++V +GR + Q
Sbjct: 349 INVDDGRFVAQ 359
>gi|440748056|ref|ZP_20927310.1| Glucose dehydrogenase, PQQ-dependent [Mariniradius saccharolyticus
AK6]
gi|436483260|gb|ELP39314.1| Glucose dehydrogenase, PQQ-dependent [Mariniradius saccharolyticus
AK6]
Length = 711
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 46/92 (50%), Gaps = 18/92 (19%)
Query: 217 SDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLT 276
++++ANS++ALD ++G+ W +D++ D DF P L+
Sbjct: 284 ANLFANSLIALDANTGKRIWHFQAVHHDVW------------------DRDFPANPNLIR 325
Query: 277 ISTNGRFRDVVVAVQKSGFAWAFDRDSGDIIW 308
I +G++ D V K G+ +AFDR +G IW
Sbjct: 326 IKKDGKWIDAVAQTSKQGYVYAFDRVTGQPIW 357
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 41/86 (47%), Gaps = 6/86 (6%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAG-----KDISATPAVANGVVYFPS 55
W GG + RY+ + IN V+ L L W++ G I P V NG++Y S
Sbjct: 31 WQTFGGTKDAARYSSLDQ-INTQNVQQLELAWTYRTGDATDRSQIQCQPIVVNGMLYATS 89
Query: 56 WNGYLYAVNAFNGALIWEQNLSKLTG 81
++A++A GA IW N +L G
Sbjct: 90 PQVNVFALDAATGAEIWRFNPFQLLG 115
>gi|381202864|ref|ZP_09909973.1| PQQ-dependent dehydrogenase methanol/ethanol family protein
[Sphingobium yanoikuyae XLDN2-5]
Length = 695
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 75/329 (22%), Positives = 125/329 (37%), Gaps = 68/329 (20%)
Query: 20 INPVTVRNLRLRW--SFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIW----- 72
IN V L L W G P +G++Y+ S ++AV+A G +W
Sbjct: 47 INDRNVGRLGLAWYQDIEGGGSSLTAPIAVDGILYYASGYSVVHAVDATTGHELWTYDPQ 106
Query: 73 -----EQNLSKLTGLSGT-----GIVVNVTVAVVVAVSRSNGELVWSTQ-IDPRPRSQIT 121
+Q + G G + V ++A++ G +WSTQ I I+
Sbjct: 107 SWKVADQKMRGAWGSRGIAYDNGAVYVGTIDGRLIAINARTGHKLWSTQTIGKDDERYIS 166
Query: 122 MSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGY 181
+ V+ G +G + A RG + D + G+ +W+ + +P G + G+
Sbjct: 167 GAPWVFNGKVLIGHGGADFA-------PIRGYVTAYDQKTGKQLWRFHTVP--GDPKLGF 217
Query: 182 SGAAV------W--------GSSPAIDVIRRQKQNNQ----TTKPTHPDQCISS-----D 218
A+ W G A + + + N+ + +Q I S +
Sbjct: 218 ENKAMAMAAKTWTGEWWKYGGGGTAWNAMAYDPKYNRIYIGVGNGSPWNQKIRSPGGGDN 277
Query: 219 IYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTIS 278
++ SIVALD D+G W Y T PG D + L +
Sbjct: 278 LFLCSIVALDADTGEYVW---------HYQTN---------PGETWDFNSAMDMELARLK 319
Query: 279 TNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
+GR RDV++ K+GF + DR +G +I
Sbjct: 320 IDGRERDVLMHAPKNGFFYVIDRATGKLI 348
>gi|387127830|ref|YP_006296435.1| methanol dehydrogenase large subunit protein [Methylophaga sp.
JAM1]
gi|386274892|gb|AFI84790.1| Methanol dehydrogenase large subunit protein [Methylophaga sp.
JAM1]
Length = 592
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 83/360 (23%), Positives = 139/360 (38%), Gaps = 87/360 (24%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAG--KDISATPAVANGVVY----FP 54
W+ GD N RY+ I V++L + WSF G + V +G +Y FP
Sbjct: 34 WVMPAGDYANTRYSE-LTQITKDNVKDLNMAWSFSTGVLRGHEGNALVIDGTMYVHTPFP 92
Query: 55 SWNGYLYAVNAFN-GALIWE----QNLSKLT----------GLS-GTG-IVVNVTVAVVV 97
+ +YA++ N GA+ W+ QN + GLS G G I +N +V
Sbjct: 93 N---IVYALDLNNDGAIKWKYEPKQNYDETVPVMCCDTVNRGLSYGDGKIFLNQADTTLV 149
Query: 98 AVSRSNGELVWSTQ-IDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAK 156
A+ GE VWS + DP+ + T + V+ VG+S E + RG +
Sbjct: 150 ALDMETGEAVWSDKRDDPKVGATSTAAAHVFDDKIIVGISGGEFGV--------RGYVQA 201
Query: 157 LDVRNGRIIWQTY-------ML--PDN-----------------GGKRGGYSGAAVWG-- 188
D +G +++ Y ML PD G + G WG
Sbjct: 202 YDF-DGNTVYKAYSTGPDDEMLVDPDKTMAMLKPVGKDSSLKSWQGDQWKIGGGTTWGWY 260
Query: 189 -SSPAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFY 247
P ++ N T P Q + + S+ D+D+G W + +D +
Sbjct: 261 SYDPDLNQFYYGSANPSTWNPV---QRPGDNKWTMSLFGRDLDTGVAKWIYQMTPFDEWD 317
Query: 248 FTCLVPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
+ + N +L+ G+ R ++V ++GFA+ DR++G+++
Sbjct: 318 YDGINEN------------------VLVDQKIKGKMRKMLVHFDRNGFAYTMDRETGELL 359
>gi|296446552|ref|ZP_06888494.1| PQQ-dependent dehydrogenase, methanol/ethanol family [Methylosinus
trichosporium OB3b]
gi|296255906|gb|EFH02991.1| PQQ-dependent dehydrogenase, methanol/ethanol family [Methylosinus
trichosporium OB3b]
Length = 611
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 82/356 (23%), Positives = 143/356 (40%), Gaps = 79/356 (22%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAG--KDISATPAVANGVVYFPS-WN 57
W+ GD N RY+ + I V L WSF G + P V V+Y + +
Sbjct: 37 WVAPTGDYANLRYSKLK-QITTENVGKLAPVWSFSTGVLRGHEGAPLVLGDVMYLHTPFP 95
Query: 58 GYLYAVNAFN-GALIWE----QNLSKL---------TGLS-GTG-IVVNVTVAVVVAVSR 101
+YA++ N G +IW+ Q+ S + GL+ G G I + +VA+
Sbjct: 96 NIVYALDLNNDGKIIWKYEPKQDPSVVPVMCCDTVNRGLAYGDGKIFLAQADTTLVALDA 155
Query: 102 SNGELVWSTQI-DPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVR 160
G+LVWS + DP + T + V+ +VG++ E + RGS+ +++
Sbjct: 156 KTGKLVWSVKNGDPSKGATSTAAPHVFKDKVFVGIAGGEFGV--------RGSITAYNIK 207
Query: 161 NGRIIWQTY-MLPDNG---------------GKRGGYS----------GAAVWG---SSP 191
+G + W+ Y M PD+ GK G + G WG P
Sbjct: 208 DGSLAWRGYSMGPDSDTLIDGEKTTHLGKPVGKDSGLNTWEGDQWQIGGGTTWGWYSYDP 267
Query: 192 AIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCL 251
++++ N T P+ Q + ++ ++ A D+D G + W ++ T
Sbjct: 268 ELNLVYYGSGNPSTWNPS---QRPGDNRWSMTLWARDLDKGTVKW--------VYQMT-- 314
Query: 252 VPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
P D D +L + G+ R +V ++GF + DR +G+++
Sbjct: 315 --------PHDEWDYDGINETILADQTIGGQARKTLVHFDRNGFGYTLDRVTGELL 362
>gi|402824632|ref|ZP_10873983.1| glucose dehydrogenase, partial [Sphingomonas sp. LH128]
gi|402261860|gb|EJU11872.1| glucose dehydrogenase, partial [Sphingomonas sp. LH128]
Length = 495
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 83/362 (22%), Positives = 135/362 (37%), Gaps = 88/362 (24%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAG---------KDIS--ATPAVANG 49
W ++G +L+ R++ I P L WSF G K IS ATP + +
Sbjct: 164 WTDYGANLSGTRHSPA-AQITPANAAKLEKAWSFETGDTKAKRPEIKSISFMATPLMVDD 222
Query: 50 VVYFPSWNGYLYAVNAFNGALIWEQN---------------LSKLTGLSGTGIVVNVTVA 94
VYF S G ++A++A G IW ++ +S +GTG ++
Sbjct: 223 KVYFCSPTGKVFALDADTGRQIWLRDPRTNIGNAQMLNCRGVSYHAAPAGTGSCAKRIIS 282
Query: 95 VVVAVSRSNGELVWST-----------------------QIDPRPRSQITMSGSVYMGAF 131
+ V +G L+ S Q+DP + S V +G
Sbjct: 283 MTV-----DGRLLASDAGTGAPCADFGKDGSVNLDEGLGQVDPL--RSYSSSPPVIVGDV 335
Query: 132 YVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIW-------QTYMLPDNGGK--RGGYS 182
V S + + D G + DV++GR++W +P G RG +
Sbjct: 336 AVLGSYVRDNYTKDDPS---GVVRAYDVKSGRLLWAWDSGRPDDAPMPGPGESWTRGSVN 392
Query: 183 GAAVWGSSPAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGG 242
+V+ + PA+ ++ N T + + YA+SIVALD+ +GR+ W
Sbjct: 393 AWSVFSADPALGLVY-LPTGNATPDHVGTHRSPMLERYASSIVALDVRTGRMRWHFQTVH 451
Query: 243 YDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRD 302
+DI+ D D P+L + R + A K G + DR
Sbjct: 452 HDIW------------------DYDMPAQPVLFDYTVGRRKIPALAAPTKRGEIFILDRA 493
Query: 303 SG 304
+G
Sbjct: 494 TG 495
>gi|384217661|ref|YP_005608827.1| hypothetical protein BJ6T_39650 [Bradyrhizobium japonicum USDA 6]
gi|354956560|dbj|BAL09239.1| hypothetical protein BJ6T_39650 [Bradyrhizobium japonicum USDA 6]
Length = 682
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 47/103 (45%), Gaps = 21/103 (20%)
Query: 220 YANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTIST 279
+ANS+VAL I++G + WA +D++ D D P L I T
Sbjct: 289 HANSVVALRIENGELVWAFQTVHHDVW------------------DYDLASQPTLARIDT 330
Query: 280 NGRFRDVVVAVQKSGFAWAFDRDSGDIIW---FKLAGPGGREG 319
RDVV+ K GF + DRD+G +W ++ GG EG
Sbjct: 331 GDGQRDVVIQPTKQGFVFVLDRDTGKPVWPVEERVVPQGGAEG 373
>gi|298251789|ref|ZP_06975592.1| Pyrrolo-quinoline quinone [Ktedonobacter racemifer DSM 44963]
gi|297546381|gb|EFH80249.1| Pyrrolo-quinoline quinone [Ktedonobacter racemifer DSM 44963]
Length = 400
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/43 (55%), Positives = 31/43 (72%)
Query: 31 RWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWE 73
RW F G I A+PAV NG+VY S +GY+YA+NA GAL+W+
Sbjct: 122 RWVFTTGGSIDASPAVGNGLVYIGSSDGYVYALNADTGALVWK 164
Score = 39.7 bits (91), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 51/113 (45%), Gaps = 16/113 (14%)
Query: 30 LRWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIW---EQNLSKLTGLSGTG 86
L WS+ G + A+PAVANG+VY S + YA++A GA W N + G
Sbjct: 285 LAWSYRTGGAVGASPAVANGIVYVGSNDDRFYALDAATGAPRWWFGTGNTVFSSAAVANG 344
Query: 87 IV-VNVTVAVVVAVSRSNGELVWSTQ----IDPRPRSQITMSGSVYMGAFYVG 134
+V V A A + G L+WS +D P ++Y G +VG
Sbjct: 345 VVFVGSDDANTYAFDAATGTLLWSYATGLGVDASP--------AIYSGMLFVG 389
>gi|283832107|ref|ZP_06351848.1| outer membrane assembly lipoprotein YfgL [Citrobacter youngae ATCC
29220]
gi|291071733|gb|EFE09842.1| outer membrane assembly lipoprotein YfgL [Citrobacter youngae ATCC
29220]
Length = 392
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 93/243 (38%), Gaps = 58/243 (23%)
Query: 44 PAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG--------------LSGTGIVV 89
PA+A+ VVY G + A+NA +G +W NL + G +SG + +
Sbjct: 65 PALADNVVYAADRAGVVKALNADDGKEVWSVNLGEKDGWFSRTSAQLSGGVTVSGGHVYI 124
Query: 90 NVTVAVVVAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCT 149
A V A++ S+G W T++ S+ +S V + T
Sbjct: 125 GSEKAQVYALNTSDGTTAWQTKVAGEALSRPVVSDGVVL------------------IHT 166
Query: 150 FRGSLAKLDVRNGRIIWQTYMLPDNGGKRG------GYSGAAVWGSSPAIDVIRR----- 198
G L L+ +G I W + + RG + A V G + + +
Sbjct: 167 SNGQLQALNEADGAIKWTVNLDMPSLSLRGESAPATAFGAAIVGGDNGRVSAVLMQQGQM 226
Query: 199 --QKQNNQTTKPTHPDQCISSDI-------------YANSIVALDIDSGRIAWAKPLGGY 243
Q++ +Q T PT D+ D Y ++ ALD+ SG+I W + LG
Sbjct: 227 IWQQRISQATGPTEIDRLSDVDTTPVIVNGVVYALAYNGNLTALDLRSGQIMWKRELGSV 286
Query: 244 DIF 246
+ F
Sbjct: 287 NDF 289
Score = 43.1 bits (100), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 61/155 (39%), Gaps = 30/155 (19%)
Query: 32 WSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLS----KLTGLSGTGI 87
W + + P V++GVV + NG L A+N +GA+ W NL L G S
Sbjct: 143 WQTKVAGEALSRPVVSDGVVLIHTSNGQLQALNEADGAIKWTVNLDMPSLSLRGESAPAT 202
Query: 88 VVNVTVA-----VVVAVSRSNGELVWSTQI-------DPRPRSQITMSGSVYMGAFYVGL 135
+ V AV G+++W +I + S + + + G Y
Sbjct: 203 AFGAAIVGGDNGRVSAVLMQQGQMIWQQRISQATGPTEIDRLSDVDTTPVIVNGVVY--- 259
Query: 136 SSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYM 170
+ G+L LD+R+G+I+W+ +
Sbjct: 260 -----------ALAYNGNLTALDLRSGQIMWKREL 283
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 61/131 (46%), Gaps = 19/131 (14%)
Query: 39 DISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG--LSGTGIVVNVTVAVV 96
D+ TP + NGVVY ++NG L A++ +G ++W++ L + + G I + V
Sbjct: 246 DVDTTPVIVNGVVYALAYNGNLTALDLRSGQIMWKRELGSVNDFIVDGNRIYLVDQNDRV 305
Query: 97 VAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAK 156
+A++ G +W TQ D R + S +Y G VG S G L
Sbjct: 306 LALTTDGGVTLW-TQSDLLHR--LLTSPVLYNGNLVVGDS--------------EGYLHW 348
Query: 157 LDVRNGRIIWQ 167
++V +GR + Q
Sbjct: 349 INVEDGRFVAQ 359
>gi|150378282|ref|YP_001314876.1| Pyrrolo-quinoline quinone [Sinorhizobium medicae WSM419]
gi|150032829|gb|ABR64943.1| Pyrrolo-quinoline quinone [Sinorhizobium medicae WSM419]
Length = 604
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 75/351 (21%), Positives = 131/351 (37%), Gaps = 79/351 (22%)
Query: 20 INPVTVRNLRLRWSFYAG--KDISATPAVANGVVYFPS-WNGYLYAVNAFN--GALIWEQ 74
IN V+ L++ ++F G K P V G+++ S + +YA++ L W+
Sbjct: 65 INTQNVKQLQVSFTFSTGVNKGHEGPPLVVGGLMFIVSPYPNIVYALDLTRPGAPLKWQY 124
Query: 75 NLSKLTGLSGTGI--VVN-------------VTVAVVVAVSRSNGELVWSTQIDPRPRSQ 119
N G VVN A VVA+ G +W+ ++ R +
Sbjct: 125 NPEPDASAQGVACCDVVNRGPTYSDGRLFFTTLDAHVVALDAGTGREIWNVKLGEINRGE 184
Query: 120 -ITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTY--------- 169
+TM+ V G+S E + RG + LD +G+ +W+ Y
Sbjct: 185 TMTMAPLVVKDKVIAGISGGEYGV--------RGWIQALDAADGKTVWKAYSTGPDRDVK 236
Query: 170 -------MLPDNGGKRGGYS----------GAAVWGSS---PAIDVIRRQKQNNQTTKPT 209
++ GK G S G VWG + P +D+I N P
Sbjct: 237 IGSDFKPFYEEDRGKDLGVSTWPPNAWEIGGGTVWGFASYDPDLDLIFYGTAN---PGPW 293
Query: 210 HPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFG 269
+P+Q + + N++ A D D+G WA +D+ + + N
Sbjct: 294 NPNQRPGDNKWTNTVFARDPDTGEARWAYQWNPHDLHDWDGINEN--------------- 338
Query: 270 EAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDIIWFKLAGPGGREGG 320
+L+ + G+ R +V ++G + DR +G+++ P GG
Sbjct: 339 ---ILVDVEWRGKPRKALVHPDRNGLVYLLDRTTGEVLSASFYHPVNTHGG 386
>gi|398950330|ref|ZP_10673697.1| PQQ-dependent dehydrogenase, methanol/ethanol family [Pseudomonas
sp. GM33]
gi|398158174|gb|EJM46532.1| PQQ-dependent dehydrogenase, methanol/ethanol family [Pseudomonas
sp. GM33]
Length = 591
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 73/351 (20%), Positives = 135/351 (38%), Gaps = 75/351 (21%)
Query: 2 LNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAG----KDISATPAVANGVVYFPSWN 57
+ +G + +RY+ ++L N V+ LR W+F G + A P V +GV+Y
Sbjct: 45 VTNGLGVQGQRYSPLDIL-NVDNVKELRPAWAFSFGGEKQRGQQAQPMVKDGVMYMTGSY 103
Query: 58 GYLYAVNAFNGALIWEQN-------------LSKLTGLSGTGIVVNVTVAVVVAVSRSNG 104
++AV+A G +W+ + +++ L G ++ A +VA+++ G
Sbjct: 104 SRVFAVDARTGKKLWQYDARLPDDIRPCCDVINRGVALYGDLVIFGTLDAKLVALNKDTG 163
Query: 105 ELVWSTQI-DPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGR 163
++VWS ++ D + I+ + V G G++ E + G + D +NG
Sbjct: 164 KVVWSKKVADHKEGYSISAAPLVINGKLITGVAGGEFGV--------VGKIEAYDPKNGD 215
Query: 164 IIWQT--------YMLPDNGGKRGGYSGAA--------VW---GSSPAIDVIRRQKQN-- 202
++W Y+ D G SG +W G++P + + N
Sbjct: 216 LLWTRPTVEGHMGYVYKDGKAVENGISGGEAGKTWPGDLWKTGGAAPWLGGYYDPETNLL 275
Query: 203 ---NQTTKPTHPDQCISSDIYANSIVALDIDSGRIAW---AKPLGGYDIFYFTCLVPNNP 256
P + ++Y++S +AL+ D G I W + P G+D LV N
Sbjct: 276 LFGTGNPAPWNSHLRPGDNLYSSSRLALNPDDGTIKWHFQSTPHDGWDYDGVNELVSFN- 334
Query: 257 DCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
+ G+ ++GF + DR +G I
Sbjct: 335 --------------------YNEGGKEIKAAATADRNGFFYVLDRTNGKFI 365
>gi|335424094|ref|ZP_08553110.1| Pyrrolo-quinoline quinone [Salinisphaera shabanensis E1L3A]
gi|335424434|ref|ZP_08553443.1| Pyrrolo-quinoline quinone [Salinisphaera shabanensis E1L3A]
gi|334889119|gb|EGM27411.1| Pyrrolo-quinoline quinone [Salinisphaera shabanensis E1L3A]
gi|334890382|gb|EGM28652.1| Pyrrolo-quinoline quinone [Salinisphaera shabanensis E1L3A]
Length = 626
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 82/364 (22%), Positives = 135/364 (37%), Gaps = 80/364 (21%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAG--KDISATPAVANGVVYFPS-WN 57
W G N +RY+ + IN L W+F G + P V +Y + +
Sbjct: 42 WTMWSGQYNGQRYSELD-QINAENAGQLSPAWTFSTGVLRGHEGGPLVIGDTMYISTPFP 100
Query: 58 GYLYAVNAFNGALIWE----QNLSKL---------TGLS-GTG-IVVNVTVAVVVAVSRS 102
++A++ A+ W+ QN + GL+ G G I + +VA+ +
Sbjct: 101 NKVFALDLETHAIKWKYEPTQNPQVIPIMCCDTVNRGLAYGDGKIFLQQADTTLVALDQK 160
Query: 103 NGELVW-STQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRN 161
G++ W S DP T + V Y G+S E + RG L +V +
Sbjct: 161 TGKVEWKSVNGDPTKGESATNAPIVIKDKVYTGISGGEFGV--------RGHLTAYNVSD 212
Query: 162 GRIIWQTYML-PDN---------------------------GGKRGGYSGAAVWG---SS 190
G++ W+ Y PD+ GG + G WG
Sbjct: 213 GKMAWRAYSTGPDDTMLIDPKKTMNAVTQKPVGADTSLKSWGGDQWKIGGGTTWGWMTYD 272
Query: 191 PAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTC 250
P +D++ N T PT Q + Y+ +I A D D+G W ++ T
Sbjct: 273 PELDLLYYGTGNPGTWNPT---QRPGDNKYSMTIFARDPDTGEAKW--------LYQMT- 320
Query: 251 LVPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDIIWFK 310
P D D +L+ +G+ R +VV ++GFA+ DR +G+++ K
Sbjct: 321 ---------PHDEWDYDGVNEKILVDQKIDGKDRKLVVHFDRNGFAYTQDRATGELLVAK 371
Query: 311 LAGP 314
P
Sbjct: 372 KYDP 375
>gi|423121599|ref|ZP_17109283.1| lipoprotein yfgL [Klebsiella oxytoca 10-5246]
gi|376393978|gb|EHT06632.1| lipoprotein yfgL [Klebsiella oxytoca 10-5246]
Length = 392
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 94/226 (41%), Gaps = 24/226 (10%)
Query: 44 PAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG--------------LSGTGIVV 89
PA A+GVVY G + A+NA +G +W NL++ G +SG + +
Sbjct: 65 PAFADGVVYAADRKGTVKALNADDGKEVWSVNLAEKDGWFSRTPALLSGGITVSGGHVYI 124
Query: 90 NVTVAVVVAVSRSNGELVWSTQIDPRPRSQITMS-GSVYMGAFYVGLSSLEEALPADQCC 148
A + A++ S+G + W ++ S+ +S G V + L +L EA A +
Sbjct: 125 GSEKAQLFALNTSDGTVAWQARVAGEAISRPVVSDGMVLVHTSNGQLQALNEADGAVK-W 183
Query: 149 TFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYS------GAAVWGS--SPAIDVIRRQK 200
T + L +R Y GG G S G +W S A +
Sbjct: 184 TVNLDMPALSLRGESAPATAYGAAIVGGDNGRVSAVLMQQGQIIWQQRISQATGPTEIDR 243
Query: 201 QNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIF 246
N+ T P + + + Y ++ ALD+ SG+I W + LG + F
Sbjct: 244 LNDVDTTPVIVNGVVYTLAYNGNLTALDLRSGQIMWKRELGSVNDF 289
Score = 39.7 bits (91), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 51/101 (50%), Gaps = 5/101 (4%)
Query: 39 DISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG--LSGTGIVVNVTVAVV 96
D+ TP + NGVVY ++NG L A++ +G ++W++ L + + G I + +
Sbjct: 246 DVDTTPVIVNGVVYTLAYNGNLTALDLRSGQIMWKRELGSVNDFIVDGNRIYLVDQNDRI 305
Query: 97 VAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSS 137
+A+S G +W TQ D R + + +Y G VG S
Sbjct: 306 LALSTEGGVTLW-TQSDLLHR--LLTAPVLYNGNLVVGDSE 343
>gi|398875735|ref|ZP_10630898.1| PQQ-dependent dehydrogenase, methanol/ethanol family [Pseudomonas
sp. GM67]
gi|398881829|ref|ZP_10636803.1| PQQ-dependent dehydrogenase, methanol/ethanol family [Pseudomonas
sp. GM60]
gi|398200042|gb|EJM86970.1| PQQ-dependent dehydrogenase, methanol/ethanol family [Pseudomonas
sp. GM60]
gi|398205947|gb|EJM92722.1| PQQ-dependent dehydrogenase, methanol/ethanol family [Pseudomonas
sp. GM67]
Length = 591
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 73/351 (20%), Positives = 135/351 (38%), Gaps = 75/351 (21%)
Query: 2 LNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAG----KDISATPAVANGVVYFPSWN 57
+ +G + +RY+ + L N V++LR W+F G + A P + +GV+Y
Sbjct: 45 VTNGLGVQGQRYSPLDTL-NVNNVKDLRPVWAFSFGGEKQRGQQAQPMIKDGVMYMTGSY 103
Query: 58 GYLYAVNAFNGALIWEQN-------------LSKLTGLSGTGIVVNVTVAVVVAVSRSNG 104
++AV+A G +W+ + +++ L G ++ A +VA+++ G
Sbjct: 104 SRVFAVDARTGKKLWQYDARLPDDIRPCCDVINRGVALYGDLVIFGTLDAKLVALNKDTG 163
Query: 105 ELVWSTQI-DPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGR 163
++VWS ++ D + I+ + V G G++ E + G + D +NG
Sbjct: 164 KVVWSKKVADHKEGYSISAAPLVINGKLITGVAGGEFGV--------VGKIEAYDPKNGD 215
Query: 164 IIWQT--------YMLPDNGGKRGGYSGAA--------VW---GSSPAIDVIRRQKQN-- 202
++W Y+ D G SG +W G++P + + N
Sbjct: 216 LLWTRPTVEGHMGYVYKDGKAVENGISGGEAGKTWPGDLWKTGGAAPWLGGYYDPETNLL 275
Query: 203 ---NQTTKPTHPDQCISSDIYANSIVALDIDSGRIAW---AKPLGGYDIFYFTCLVPNNP 256
P + ++Y++S +AL+ D G I W + P G+D LV N
Sbjct: 276 LFGTGNPAPWNSHLRPGDNLYSSSRLALNPDDGTIKWHFQSTPHDGWDYDGVNELVSFN- 334
Query: 257 DCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
S G+ ++GF + DR +G I
Sbjct: 335 --------------------YSEGGKEIKAAATADRNGFFYVLDRTNGKFI 365
>gi|182414006|ref|YP_001819072.1| Pyrrolo-quinoline quinone [Opitutus terrae PB90-1]
gi|177841220|gb|ACB75472.1| Pyrrolo-quinoline quinone [Opitutus terrae PB90-1]
Length = 484
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 60/133 (45%), Gaps = 9/133 (6%)
Query: 16 GEVLINPVTVRNLRLRWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQN 75
G+ + V + + R WSF G + +TP+VA+G V+ S++G++YA++A GA W
Sbjct: 176 GDGTVRCVALADGREHWSFMTGHRVRSTPSVADGAVFVGSFDGHVYALDAQTGAERWRFQ 235
Query: 76 LSKLT----GLSGTGIVVNVTVAVVVAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAF 131
L +SG + V + G L W P S + S ++ G
Sbjct: 236 TGDLVQSSPAVSGGVVCFGARSMAVFGLDAKTGALKWRR---PHSGSWVVASPAIAAGKV 292
Query: 132 YVG--LSSLEEAL 142
+G S L EAL
Sbjct: 293 IIGGSDSHLLEAL 305
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 46/89 (51%), Gaps = 4/89 (4%)
Query: 24 TVRNLRLRWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNL----SKL 79
TV + W F G + +TPAV+ G+ F S +G+LYAV+A G +W+ L S
Sbjct: 52 TVELAGMAWRFETGGPVRSTPAVSRGIAVFGSNDGFLYAVDAKTGGQVWKIKLGGPVSSS 111
Query: 80 TGLSGTGIVVNVTVAVVVAVSRSNGELVW 108
++ ++V V+ A+ NG+ +W
Sbjct: 112 PAIAEDRVIVMGADGVLRALRLENGDALW 140
>gi|386630282|ref|YP_006150002.1| outer membrane protein assembly complex subunit [Escherichia coli
str. 'clone D i2']
gi|386635202|ref|YP_006154921.1| outer membrane protein assembly complex subunit [Escherichia coli
str. 'clone D i14']
gi|355421181|gb|AER85378.1| outer membrane protein assembly complex subunit [Escherichia coli
str. 'clone D i2']
gi|355426101|gb|AER90297.1| outer membrane protein assembly complex subunit [Escherichia coli
str. 'clone D i14']
Length = 361
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 95/226 (42%), Gaps = 24/226 (10%)
Query: 44 PAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG--------------LSGTGIVV 89
PA+A+ VVY G + A+NA +G IW NL++ G +SG + +
Sbjct: 34 PALADNVVYAADRAGLVKALNADDGKEIWSVNLAEKDGWFSKDPALLSGGVTVSGGHVYI 93
Query: 90 NVTVAVVVAVSRSNGELVWSTQIDPRPRSQITMS-GSVYMGAFYVGLSSLEEALPADQCC 148
A V A++ S+G + W T++ S+ +S G V + L +L EA A +
Sbjct: 94 GTEKAQVYALNTSDGTVAWQTKVAGEALSRPVVSDGLVLIHTSNGQLQALNEADGAVK-W 152
Query: 149 TFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYS------GAAVWGS--SPAIDVIRRQK 200
T + L +R + GG G S G +W S A +
Sbjct: 153 TVNLDMPSLSLRGESAPATAFGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDR 212
Query: 201 QNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIF 246
++ T P + + + Y ++ ALD+ SG+I W + LG + F
Sbjct: 213 LSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQIMWKRELGSVNDF 258
Score = 42.4 bits (98), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 63/157 (40%), Gaps = 34/157 (21%)
Query: 32 WSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLS----KLTGLSGTGI 87
W + + P V++G+V + NG L A+N +GA+ W NL L G S
Sbjct: 112 WQTKVAGEALSRPVVSDGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPAT 171
Query: 88 VVNVTVA-----VVVAVSRSNGELVW---------STQIDPRPRSQITMSGSVYMGAFYV 133
V V AV G+++W ST+ID S + + V G +
Sbjct: 172 AFGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEID--RLSDVDTTPVVVNGVVF- 228
Query: 134 GLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYM 170
+ G+L LD+R+G+I+W+ +
Sbjct: 229 -------------ALAYNGNLTALDLRSGQIMWKREL 252
Score = 39.3 bits (90), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 61/131 (46%), Gaps = 19/131 (14%)
Query: 39 DISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG--LSGTGIVVNVTVAVV 96
D+ TP V NGVV+ ++NG L A++ +G ++W++ L + + G I + V
Sbjct: 215 DVDTTPVVVNGVVFALAYNGNLTALDLRSGQIMWKRELGSVNDFIVDGNRIYLVDQNDRV 274
Query: 97 VAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAK 156
+A++ G +W TQ D R + S +Y G VG S G L
Sbjct: 275 MALTIDGGVTLW-TQSDLLHR--LLTSPVLYNGNLVVGDS--------------EGYLHW 317
Query: 157 LDVRNGRIIWQ 167
++V +GR + Q
Sbjct: 318 INVEDGRFVAQ 328
>gi|148553644|ref|YP_001261226.1| pyrrolo-quinoline quinone [Sphingomonas wittichii RW1]
gi|148498834|gb|ABQ67088.1| Pyrrolo-quinoline quinone [Sphingomonas wittichii RW1]
Length = 702
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 75/353 (21%), Positives = 130/353 (36%), Gaps = 78/353 (22%)
Query: 1 WLNHGGDLNNRRYA-YGEVLINPVTVRNLRLRWSFYAGKD------ISATPAVANGVVYF 53
W HG D +R++ GE I P V L + W YA D + TP V +GV+Y
Sbjct: 41 WALHGQDAGEKRFSDLGE--ITPANVGQLGVAW--YADFDARSLRGVEGTPLVVDGVMYA 96
Query: 54 PSWNGYLYAVNAFNGALIWEQN---------------LSKLTGLSGTGIVVNVTVAVVVA 98
+ A++A +G +WE + +++ + + V V +VA
Sbjct: 97 SGPWSKVIALDAQSGKKLWEYDPQFDGAIARRACCDVVNRGVAYADGKVFVGVLDGRLVA 156
Query: 99 VSRSNGELVWSTQIDPRPRS-QITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKL 157
+ G+ VW+ Q +S +T + + +G E + RG +
Sbjct: 157 LDAKTGKPVWTVQTTDTTKSYTVTGAPRIVKDKVVIGNGGAEYGV--------RGYVTAY 208
Query: 158 DVRNGRIIWQTYMLPDNGGKRGGYS--------------------GAAVWGS---SPAID 194
DV G+ W+ Y +P G + G+ G W S P +D
Sbjct: 209 DVATGKQAWRFYTIP--GDPKKGFENDAMAMAAKSWNGEWWKYGGGGTAWDSMAYDPELD 266
Query: 195 VIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPN 254
++ N +++ +SIVA+ +G W +F +
Sbjct: 267 LLYIGVGNGGPWDRAVRSAGKGDNLFLSSIVAVRPSTGEYVW----------HFQEV--- 313
Query: 255 NPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
PG D + +L + +G+ R V++ K+GF + DR +G I
Sbjct: 314 -----PGDEWDYTATQHMILADLEIDGKPRKVLMQAPKNGFFYVLDRTNGAFI 361
>gi|422023273|ref|ZP_16369778.1| outer membrane biogenesis protein BamB [Providencia sneebia DSM
19967]
gi|414094041|gb|EKT55711.1| outer membrane biogenesis protein BamB [Providencia sneebia DSM
19967]
Length = 390
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 97/254 (38%), Gaps = 74/254 (29%)
Query: 44 PAVANGVVYF-----PSWNGY-LYA------VNAFN---GALIWEQNLSKLTG------- 81
+V NGV F P+W+G +YA V AF+ G +W +LSK TG
Sbjct: 47 KSVGNGVAQFYSDLSPAWDGSAVYAADRKGLVKAFDLDSGKELWSVDLSKRTGFLSSNLS 106
Query: 82 --------LSGTGIVVNVTVAVVVAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYV 133
+SG I + V+A+++ +G +VW ++ S+ T S + M
Sbjct: 107 ALLSGGLTVSGDNIYIGTERGTVIALNKEDGAVVWDVEVAGEALSRPTESNGLVM----- 161
Query: 134 GLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNGGKRG------GYSGAAVW 187
T G L LDV NG I W + + RG + A V
Sbjct: 162 -------------VHTSNGMLQALDVTNGEIKWTVNLETPSLSVRGESAPAVAFGAAIVG 208
Query: 188 GSSPAIDVI----------RRQKQNNQTTK----------PTHPDQCISSDIYANSIVAL 227
G + + + +R Q +T+ P D I + Y ++ AL
Sbjct: 209 GDNGRVSAVLLSQGQLIWQQRISQVTSSTEIGRLDDVDMTPIIDDGVIYAIAYNGTLAAL 268
Query: 228 DIDSGRIAWAKPLG 241
D+ SG+I W + LG
Sbjct: 269 DMRSGQIMWKRDLG 282
Score = 45.8 bits (107), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 64/149 (42%), Gaps = 24/149 (16%)
Query: 32 WSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLS----KLTGLSGTGI 87
W + + P +NG+V + NG L A++ NG + W NL + G S +
Sbjct: 141 WDVEVAGEALSRPTESNGLVMVHTSNGMLQALDVTNGEIKWTVNLETPSLSVRGESAPAV 200
Query: 88 VVNVTVA-----VVVAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEAL 142
+ V AV S G+L+W +I SQ+T S + L ++
Sbjct: 201 AFGAAIVGGDNGRVSAVLLSQGQLIWQQRI-----SQVTSSTEIGR------LDDVDMTP 249
Query: 143 PADQ----CCTFRGSLAKLDVRNGRIIWQ 167
D + G+LA LD+R+G+I+W+
Sbjct: 250 IIDDGVIYAIAYNGTLAALDMRSGQIMWK 278
Score = 42.4 bits (98), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 45/75 (60%), Gaps = 2/75 (2%)
Query: 39 DISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG--LSGTGIVVNVTVAVV 96
D+ TP + +GV+Y ++NG L A++ +G ++W+++L + LSG + + V
Sbjct: 244 DVDMTPIIDDGVIYAIAYNGTLAALDMRSGQIMWKRDLGSVNNMVLSGENLYLVDQNDRV 303
Query: 97 VAVSRSNGELVWSTQ 111
+++ +S+G +WS +
Sbjct: 304 LSIRKSDGVTLWSQE 318
>gi|401764737|ref|YP_006579744.1| outer membrane biogenesis protein BamB [Enterobacter cloacae subsp.
cloacae ENHKU01]
gi|400176271|gb|AFP71120.1| outer membrane biogenesis protein BamB [Enterobacter cloacae subsp.
cloacae ENHKU01]
Length = 392
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 94/237 (39%), Gaps = 46/237 (19%)
Query: 44 PAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG--------------LSGTGIVV 89
PA A+ VVY G + AVNA +G +W NL++ G ++G + V
Sbjct: 65 PAFADSVVYAADRKGTVKAVNADDGKEVWSVNLAEKDGWFSRKPALLSGGLTVAGGHVYV 124
Query: 90 NVTVAVVVAVSRSNGELVWSTQIDPRPRSQITMS-GSVYMGAFYVGLSSLEEA------- 141
A V A++ S+G + W T + S+ +S G V + L +L EA
Sbjct: 125 GSEKAQVYALNTSDGSIAWQTTVAGESLSRPVVSDGLVLIHTSNGQLQALNEADGLVKWT 184
Query: 142 ----LPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYS------GAAVWGS-- 189
+PA + RG A I+ GG G S G +W
Sbjct: 185 VNLDMPA---LSLRGESAPATAFGAAIV---------GGDNGRVSAVLMQQGQMIWQQRI 232
Query: 190 SPAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIF 246
S A + ++ T P D + + Y ++ ALD+ SG+I W + LG + F
Sbjct: 233 SQATGSTEIDRLSDVDTTPVIVDGVVYALAYNGNLTALDLRSGQIMWKRELGSVNDF 289
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 64/153 (41%), Gaps = 35/153 (22%)
Query: 36 AGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLS----KLTGLSGTGIVVNV 91
AG+ +S P V++G+V + NG L A+N +G + W NL L G S
Sbjct: 148 AGESLS-RPVVSDGLVLIHTSNGQLQALNEADGLVKWTVNLDMPALSLRGESAPATAFGA 206
Query: 92 TVA-----VVVAVSRSNGELVW---------STQIDPRPRSQITMSGSVYMGAFYVGLSS 137
+ V AV G+++W ST+ID S + + + G Y
Sbjct: 207 AIVGGDNGRVSAVLMQQGQMIWQQRISQATGSTEID--RLSDVDTTPVIVDGVVY----- 259
Query: 138 LEEALPADQCCTFRGSLAKLDVRNGRIIWQTYM 170
+ G+L LD+R+G+I+W+ +
Sbjct: 260 ---------ALAYNGNLTALDLRSGQIMWKREL 283
Score = 40.0 bits (92), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 62/131 (47%), Gaps = 19/131 (14%)
Query: 39 DISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG--LSGTGIVVNVTVAVV 96
D+ TP + +GVVY ++NG L A++ +G ++W++ L + + G I + +
Sbjct: 246 DVDTTPVIVDGVVYALAYNGNLTALDLRSGQIMWKRELGSVNDFIVDGNRIYMVDQNDRL 305
Query: 97 VAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAK 156
+A+S G +W TQ D R + + ++Y G+ VG S G +
Sbjct: 306 LALSTEGGVTLW-TQSDLLHR--LLTAPALYNGSLVVGDS--------------EGYMHW 348
Query: 157 LDVRNGRIIWQ 167
+D NGR + Q
Sbjct: 349 IDPDNGRFVAQ 359
>gi|395649516|ref|ZP_10437366.1| quinoprotein ethanol dehydrogenase PedH [Pseudomonas
extremaustralis 14-3 substr. 14-3b]
Length = 591
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 72/351 (20%), Positives = 134/351 (38%), Gaps = 75/351 (21%)
Query: 2 LNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAG----KDISATPAVANGVVYFPSWN 57
+ +G + +RY+ + L N V++LR W+F G + A P + +GV+Y
Sbjct: 45 VTNGLGVQGQRYSPLDTL-NVDNVKDLRPVWAFSFGGEKQRGQQAQPMIKDGVMYLTGSY 103
Query: 58 GYLYAVNAFNGALIWEQN-------------LSKLTGLSGTGIVVNVTVAVVVAVSRSNG 104
++AV+A G +W+ + +++ L G + A +VA+++ G
Sbjct: 104 SRVFAVDARTGKKLWQYDARLPDDIRPCCDVINRGVALYGDLVFFGTLDAKLVALNKDTG 163
Query: 105 ELVWSTQI-DPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGR 163
++VWS Q+ D + I+ + V G G++ E + G + D +NG
Sbjct: 164 KVVWSKQVADHKEGYSISAAPLVINGKLITGVAGGEFGV--------VGKIQAYDPKNGE 215
Query: 164 IIWQT--------YMLPDNGGKRGGYSGAA--------VW---GSSPAIDVIRRQKQN-- 202
++W Y+ D G SG +W G++P + + N
Sbjct: 216 LLWMRPTVEGHMGYVYKDGKAVENGISGGEAGKTWPGDLWKTGGAAPWLGGYYDPETNLL 275
Query: 203 ---NQTTKPTHPDQCISSDIYANSIVALDIDSGRIAW---AKPLGGYDIFYFTCLVPNNP 256
P + ++Y++S +AL+ D G I W + P G+D L+ N
Sbjct: 276 LFGTGNPAPWNSHLRPGDNLYSSSRLALNPDDGTIKWHFQSTPHDGWDYDGVNELISFN- 334
Query: 257 DCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
+ G+ ++GF + DR +G I
Sbjct: 335 --------------------YTEGGKEIKAAATADRNGFFYVLDRTNGKFI 365
>gi|127512225|ref|YP_001093422.1| outer membrane protein assembly complex subunit YfgL [Shewanella
loihica PV-4]
gi|126637520|gb|ABO23163.1| Pyrrolo-quinoline quinone [Shewanella loihica PV-4]
Length = 395
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 67/159 (42%), Gaps = 20/159 (12%)
Query: 19 LINPVTVRNLRLRWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIW--EQNL 76
L+ V + W AG ++ + P V VV + G L A N +G +W E L
Sbjct: 132 LLGAVDAETGEMVWHVTAGGELLSAPTVGEDVVVVHTSTGALEAYNVDDGKQLWVYESKL 191
Query: 77 SKLTGLSGT--------GIVVNVTVAVVVAVSRSNGELVWSTQI-DPRPRSQITMSGSVY 127
LT L GT G V V V +SNG+ W I P+ ++ T V
Sbjct: 192 PTLT-LRGTGSAAYEAGGFFVGTADGKVAVVVKSNGQAAWEQPIYTPKGGNEFTRMADVD 250
Query: 128 MGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIW 166
M VG E + A ++ G+L +++R GR++W
Sbjct: 251 MKPLIVG-----ENIYA---VSYNGNLVSMELRTGRVVW 281
>gi|365108712|ref|ZP_09336571.1| lipoprotein yfgL [Citrobacter freundii 4_7_47CFAA]
gi|363640606|gb|EHL80077.1| lipoprotein yfgL [Citrobacter freundii 4_7_47CFAA]
Length = 392
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 92/243 (37%), Gaps = 58/243 (23%)
Query: 44 PAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG--------------LSGTGIVV 89
PA+A+ VVY G + A+NA +G +W NL + G +SG + +
Sbjct: 65 PALADNVVYAADRAGVVKALNAGDGKEVWSVNLGEKDGWFSRASAQLSGGVTVSGGHVYI 124
Query: 90 NVTVAVVVAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCT 149
A V A++ S+G W T++ S+ +S V + T
Sbjct: 125 GSEKAQVYALNTSDGTTAWQTKVAGEALSRPVVSDGVVL------------------IHT 166
Query: 150 FRGSLAKLDVRNGRIIWQTYMLPDNGGKRG------GYSGAAVWGSSPAIDVIRRQKQN- 202
G L L+ +G I W + + RG + A V G + + + Q+
Sbjct: 167 SNGQLQALNEADGAIKWTVNLDMPSLSLRGESAPATAFGAAIVGGDNGRVSAVLMQQGQM 226
Query: 203 ------NQTTKPTHPDQCISSDI-------------YANSIVALDIDSGRIAWAKPLGGY 243
+Q T PT D+ D Y ++ ALD+ SG+I W + LG
Sbjct: 227 IWQQRISQATGPTEIDRLSDVDTTPVIVNGVVYALAYNGNLTALDLRSGQIMWKRELGSV 286
Query: 244 DIF 246
+ F
Sbjct: 287 NDF 289
Score = 42.7 bits (99), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 61/155 (39%), Gaps = 30/155 (19%)
Query: 32 WSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLS----KLTGLSGTGI 87
W + + P V++GVV + NG L A+N +GA+ W NL L G S
Sbjct: 143 WQTKVAGEALSRPVVSDGVVLIHTSNGQLQALNEADGAIKWTVNLDMPSLSLRGESAPAT 202
Query: 88 VVNVTVA-----VVVAVSRSNGELVWSTQI-------DPRPRSQITMSGSVYMGAFYVGL 135
+ V AV G+++W +I + S + + + G Y
Sbjct: 203 AFGAAIVGGDNGRVSAVLMQQGQMIWQQRISQATGPTEIDRLSDVDTTPVIVNGVVY--- 259
Query: 136 SSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYM 170
+ G+L LD+R+G+I+W+ +
Sbjct: 260 -----------ALAYNGNLTALDLRSGQIMWKREL 283
Score = 39.7 bits (91), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 61/131 (46%), Gaps = 19/131 (14%)
Query: 39 DISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG--LSGTGIVVNVTVAVV 96
D+ TP + NGVVY ++NG L A++ +G ++W++ L + + G I + V
Sbjct: 246 DVDTTPVIVNGVVYALAYNGNLTALDLRSGQIMWKRELGSVNDFIVDGNRIYLVDQNDRV 305
Query: 97 VAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAK 156
+A++ G +W TQ D R + S +Y G VG S G L
Sbjct: 306 LALTTDGGVTLW-TQSDLLHR--LLTSPILYNGNLVVGDS--------------EGYLHW 348
Query: 157 LDVRNGRIIWQ 167
++V +GR + Q
Sbjct: 349 INVDDGRFVAQ 359
>gi|444375909|ref|ZP_21175160.1| Quino(hemo)protein alcohol dehydrogenase, PQQ-dependent
[Enterovibrio sp. AK16]
gi|443679997|gb|ELT86646.1| Quino(hemo)protein alcohol dehydrogenase, PQQ-dependent
[Enterovibrio sp. AK16]
Length = 585
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 71/348 (20%), Positives = 131/348 (37%), Gaps = 69/348 (19%)
Query: 2 LNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAG----KDISATPAVANGVVYFPSWN 57
+ +G L +RY+ + IN TV+ +R W+F G + + P V +GV+Y
Sbjct: 44 VTYGLGLRGQRYSPIDT-INRETVKEIRPVWAFSLGGEKQRGQESQPMVKDGVMYITGSY 102
Query: 58 GYLYAVNAFNGALIWEQNLSKLTGLSGTGIVVNVTVAV-------------VVAVSRSNG 104
++A++A G +W+ + G+ V+N VA+ +VA+ G
Sbjct: 103 SRVFAIDAKTGEELWQYDARLPDGIMPCCDVINRGVALYDDLVIFGTLDAKLVALDAKTG 162
Query: 105 ELVWSTQIDP-RPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGR 163
+ W +D + IT + V G G+S E + G + D + G+
Sbjct: 163 KTRWKKTVDNYQDGYSITAAPIVVKGKVITGVSGGEFGI--------VGKVRAYDAKTGK 214
Query: 164 IIWQT--------YMLPDNGGKRGGYSGAA--------VW---GSSPAIDVIRRQKQN-- 202
++W+ Y+ D G SG A +W G++P + +
Sbjct: 215 LVWERPTVEGHMGYVWKDGKKTENGISGGAPGKTWPADLWKSGGAAPWLGGTYDADTDLL 274
Query: 203 ---NQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCP 259
P + +++++S +A+D D G+I W +F
Sbjct: 275 FFGTGNPAPWNSHMRPGDNLFSSSRLAIDPDDGKIVW----------HFQTT-------- 316
Query: 260 PGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
P D D + + NG+ ++GF + +R +GD I
Sbjct: 317 PHDGWDFDGVNELIAFDYTENGKKVKAAATADRNGFFYVLNRTNGDFI 364
>gi|423304880|ref|ZP_17282879.1| hypothetical protein HMPREF1072_01819 [Bacteroides uniformis
CL03T00C23]
gi|423310005|ref|ZP_17287989.1| hypothetical protein HMPREF1073_02739 [Bacteroides uniformis
CL03T12C37]
gi|392682843|gb|EIY76182.1| hypothetical protein HMPREF1072_01819 [Bacteroides uniformis
CL03T00C23]
gi|392683295|gb|EIY76632.1| hypothetical protein HMPREF1073_02739 [Bacteroides uniformis
CL03T12C37]
Length = 609
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 68/296 (22%), Positives = 116/296 (39%), Gaps = 47/296 (15%)
Query: 25 VRNLRLRWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIW-----EQNLSKL 79
++N + WSF +GK I TPAV+ G+V F S + +Y +NA +G+L+W E L +
Sbjct: 313 LKNGKKLWSFESGKRIVGTPAVSEGIVVFGSADRRIYGLNAKDGSLLWTVEAAEPVLGAV 372
Query: 80 TGLSGTGIVVNVTVAVVVAVSRSNGELVWSTQ-----IDPRPRSQITMSGSVYMGAFYVG 134
T G + + A A+ G+++W+ I+ +P + V GA+
Sbjct: 373 TIADGRA-YIGASDATFRAIDIHTGKVIWAYTSVKGYIETKP---LVTEDKVIFGAWDNT 428
Query: 135 LSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYSGAAVWGSSPAID 194
L +L +A NG +W+ G R +S AAVW +
Sbjct: 429 LYALSKA-------------------NGHELWKW----TGGLTRMHFSPAAVWPVATDGK 465
Query: 195 VIRRQKQNNQTTKPTHPDQCI--SSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLV 252
V Q T H + + + L D RI ++K + + Y
Sbjct: 466 VFITDPQRAMTAIDIHTGNTVWRTFQSMVRETIGLSEDGERI-YSKTMNDSIVCY--AAQ 522
Query: 253 PNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDIIW 308
+ P N+ + AP + + G V+ K G +A + +G ++W
Sbjct: 523 GDTPRELWATNVGFGYEHAPS-MQVEKEG----VMFGSTKEGLIFALEGKTGKVLW 573
>gi|237732491|ref|ZP_04562972.1| outer membrane protein assembly complex subunit YfgL [Citrobacter
sp. 30_2]
gi|226908030|gb|EEH93948.1| outer membrane protein assembly complex subunit YfgL [Citrobacter
sp. 30_2]
Length = 392
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 92/243 (37%), Gaps = 58/243 (23%)
Query: 44 PAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG--------------LSGTGIVV 89
PA+A+ VVY G + A+NA +G +W NL + G +SG + +
Sbjct: 65 PALADNVVYAADRAGVVKALNAGDGKEVWSVNLGEKDGWFSRASAQLSGGVTVSGGHVYI 124
Query: 90 NVTVAVVVAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCT 149
A V A++ S+G W T++ S+ +S V + T
Sbjct: 125 GSEKAQVYALNTSDGTTAWQTKVAGEALSRPVVSDGVVL------------------IHT 166
Query: 150 FRGSLAKLDVRNGRIIWQTYMLPDNGGKRG------GYSGAAVWGSSPAIDVIRRQKQN- 202
G L L+ +G I W + + RG + A V G + + + Q+
Sbjct: 167 SNGQLQALNEADGAIKWTVNLDMPSLSLRGESAPATAFGAAIVGGDNGRVSAVLMQQGQM 226
Query: 203 ------NQTTKPTHPDQCISSDI-------------YANSIVALDIDSGRIAWAKPLGGY 243
+Q T PT D+ D Y ++ ALD+ SG+I W + LG
Sbjct: 227 IWQQRISQATGPTEIDRLSDVDTTPVIVNGVVYALAYNGNLTALDLRSGQIMWKRELGSV 286
Query: 244 DIF 246
+ F
Sbjct: 287 NDF 289
Score = 42.7 bits (99), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 61/155 (39%), Gaps = 30/155 (19%)
Query: 32 WSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLS----KLTGLSGTGI 87
W + + P V++GVV + NG L A+N +GA+ W NL L G S
Sbjct: 143 WQTKVAGEALSRPVVSDGVVLIHTSNGQLQALNEADGAIKWTVNLDMPSLSLRGESAPAT 202
Query: 88 VVNVTVA-----VVVAVSRSNGELVWSTQI-------DPRPRSQITMSGSVYMGAFYVGL 135
+ V AV G+++W +I + S + + + G Y
Sbjct: 203 AFGAAIVGGDNGRVSAVLMQQGQMIWQQRISQATGPTEIDRLSDVDTTPVIVNGVVY--- 259
Query: 136 SSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYM 170
+ G+L LD+R+G+I+W+ +
Sbjct: 260 -----------ALAYNGNLTALDLRSGQIMWKREL 283
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 61/131 (46%), Gaps = 19/131 (14%)
Query: 39 DISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG--LSGTGIVVNVTVAVV 96
D+ TP + NGVVY ++NG L A++ +G ++W++ L + + G I + V
Sbjct: 246 DVDTTPVIVNGVVYALAYNGNLTALDLRSGQIMWKRELGSVNDFIVDGNRIYLVDQNDRV 305
Query: 97 VAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAK 156
+A++ G +W TQ D R + S +Y G VG S G L
Sbjct: 306 LALTTDGGVTLW-TQSDLLHR--LLTSPVLYNGNLVVGDS--------------EGYLHW 348
Query: 157 LDVRNGRIIWQ 167
++V +GR + Q
Sbjct: 349 INVDDGRFVAQ 359
>gi|448564119|ref|ZP_21635820.1| PQQ repeat protein [Haloferax prahovense DSM 18310]
gi|445717106|gb|ELZ68827.1| PQQ repeat protein [Haloferax prahovense DSM 18310]
Length = 384
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 72/140 (51%), Gaps = 6/140 (4%)
Query: 31 RWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQN----LSKLTGLSGTG 86
RW + AG ++ VA+GVVYF +G ++AV+A +GA IW + ++ L +S G
Sbjct: 151 RWRYNAGAILNHDSVVADGVVYFSDADGVIHAVSAADGAAIWSLDTGFGITSLA-MSDGG 209
Query: 87 IVVNVTVAVVVAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQ 146
I + + + + + G + WS + PR + + G VY+G + L++ + A ++
Sbjct: 210 IFFGGSNSRISRLDAATGVVEWSHPVPYSPRHIVLVDGIVYVGGWPY-LATYDAADGTER 268
Query: 147 CCTFRGSLAKLDVRNGRIIW 166
+ G++ + R+I+
Sbjct: 269 WRVYVGTITNSPAISDRLIY 288
Score = 39.3 bits (90), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 45/104 (43%), Gaps = 8/104 (7%)
Query: 44 PAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTGLSGTGIVVNVTV------AVVV 97
P VANGVVY W YA ++ G+ W N + L+ +V + V V+
Sbjct: 124 PTVANGVVYIGDWEHIFYAFDSTTGSERWRYNAGAI--LNHDSVVADGVVYFSDADGVIH 181
Query: 98 AVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEA 141
AVS ++G +WS S G ++ G +S L+ A
Sbjct: 182 AVSAADGAAIWSLDTGFGITSLAMSDGGIFFGGSNSRISRLDAA 225
>gi|42524276|ref|NP_969656.1| serine/threonine protein kinase [Bdellovibrio bacteriovorus HD100]
gi|39576484|emb|CAE80649.1| putative serine/threonine protein kinase [Bdellovibrio
bacteriovorus HD100]
Length = 423
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 46/97 (47%), Gaps = 6/97 (6%)
Query: 25 VRNLRLRWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSK-----L 79
++N + +WSF DI + YF SW+G YAV A GALIW+ L +
Sbjct: 253 LKNGQKKWSFATASDIKCAALIHGDRAYFSSWDGNFYAVKAGTGALIWKTALDEGGSMSC 312
Query: 80 TGLSGTGIVVNVT-VAVVVAVSRSNGELVWSTQIDPR 115
LS G ++ VT V+ S+G++ W I R
Sbjct: 313 PSLSADGSLLAVTGYKKNFVVATSDGKIQWEKPILER 349
Score = 41.6 bits (96), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 53/119 (44%), Gaps = 15/119 (12%)
Query: 27 NLRLRWSFYAG---KDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTGLS 83
N LRW FY+G + +TP +Y + GYLY++N GAL W G S
Sbjct: 125 NGNLRWQFYSGVSSRGFHSTPLTDQDSIYAGDYAGYLYSLNKDTGALRWITKTGVTIGAS 184
Query: 84 G--------TGIVVNVTVAVVVAVSRSNGELVWST-QIDPRPRSQITM---SGSVYMGA 130
TG+ + ++A+S +G +W++ I P S ++ G + MG+
Sbjct: 185 PLMNNGILYTGVELAKPDGFLLAISARDGRWLWTSPLIGNHPHSSPSLNLPQGQILMGS 243
>gi|270295543|ref|ZP_06201744.1| conserved hypothetical protein [Bacteroides sp. D20]
gi|270274790|gb|EFA20651.1| conserved hypothetical protein [Bacteroides sp. D20]
Length = 619
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 68/296 (22%), Positives = 116/296 (39%), Gaps = 47/296 (15%)
Query: 25 VRNLRLRWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIW-----EQNLSKL 79
++N + WSF +GK I TPAV+ G+V F S + +Y +NA +G+L+W E L +
Sbjct: 323 LKNGKKLWSFESGKRIVGTPAVSEGIVVFGSADRRIYGLNAKDGSLLWTVEAAEPVLGAV 382
Query: 80 TGLSGTGIVVNVTVAVVVAVSRSNGELVWSTQ-----IDPRPRSQITMSGSVYMGAFYVG 134
T G + + A A+ G+++W+ I+ +P + V GA+
Sbjct: 383 TIADGRA-YIGASDATFRAIDIHTGKVIWAYTSVKGYIETKP---LVTEDKVIFGAWDNT 438
Query: 135 LSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYSGAAVWGSSPAID 194
L +L +A NG +W+ G R +S AAVW +
Sbjct: 439 LYALSKA-------------------NGHELWKW----TGGLTRMHFSPAAVWPVATDGK 475
Query: 195 VIRRQKQNNQTTKPTHPDQCI--SSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLV 252
V Q T H + + + L D RI ++K + + Y
Sbjct: 476 VFITDPQRAMTAIDIHTGNTVWRTFQSMVRETIGLSEDGERI-YSKTMNDSIVCY--AAQ 532
Query: 253 PNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDIIW 308
+ P N+ + AP + + G V+ K G +A + +G ++W
Sbjct: 533 GDTPRELWATNVGFGYEHAPS-MQVEKEG----VMFGSTKEGLIFALEGKTGKVLW 583
>gi|113969575|ref|YP_733368.1| outer membrane protein assembly complex subunit YfgL [Shewanella
sp. MR-4]
gi|113884259|gb|ABI38311.1| Pyrrolo-quinoline quinone [Shewanella sp. MR-4]
Length = 395
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 77/169 (45%), Gaps = 21/169 (12%)
Query: 10 NRRYAYGEV-LINPVTVRNLRLRWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNG 68
N+ + GE L+ + + ++ W AG ++ + P VA+ VV + +G L A N G
Sbjct: 122 NKIFVGGESGLLAALNAEDGQVLWHVVAGGELLSKPTVADDVVVVSTSSGALEAFNVDTG 181
Query: 69 ALIW--EQNLSKLTGLSGT--------GIVVNVTVAVVVAVSRSNGELVWSTQI-DPRPR 117
A +W E L LT L GT G + V V ++NG+ W I +P
Sbjct: 182 AKLWAYEMQLPNLT-LRGTGSAAYEAGGFFIGTADGKVAVVVKNNGQAAWEQAIYNPTGG 240
Query: 118 SQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIW 166
++ T V M +G + L A ++ G+L +++R GR++W
Sbjct: 241 NEFTRMADVDMTPLILG-----DNLYA---VSYNGNLVSMELRTGRVVW 281
>gi|152971373|ref|YP_001336482.1| outer membrane protein assembly complex subunit YfgL [Klebsiella
pneumoniae subsp. pneumoniae MGH 78578]
gi|150956222|gb|ABR78252.1| putative dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae MGH
78578]
Length = 392
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 94/226 (41%), Gaps = 24/226 (10%)
Query: 44 PAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG--------------LSGTGIVV 89
PA A+GVVY G + A+NA +G +W NL++ G +SG + +
Sbjct: 65 PAFADGVVYAADRKGTVKALNADDGKEVWSVNLAEKDGWFSRTPALLSGGVTVSGGHVYI 124
Query: 90 NVTVAVVVAVSRSNGELVWSTQIDPRPRSQITMS-GSVYMGAFYVGLSSLEEALPADQCC 148
A + A++ S+G + W T++ S+ +S G V + L +L E A +
Sbjct: 125 GSEKAQLYALNTSDGSVAWQTRVAGEALSRPVVSDGMVLVHTSNGQLQALNETDGAVK-W 183
Query: 149 TFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYS------GAAVWGS--SPAIDVIRRQK 200
T + L +R Y GG G S G +W S A +
Sbjct: 184 TVNLDMPALSLRGESAPAIAYGAAIVGGDNGRVSAVLMQQGQMIWQQRISTATGPTEIDR 243
Query: 201 QNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIF 246
N+ T P + + + Y ++ ALD+ SG+I W + LG + F
Sbjct: 244 LNDVDTTPIIVNGVVYALAYNGNLTALDLRSGQIMWKRELGSVNDF 289
Score = 38.1 bits (87), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 63/139 (45%), Gaps = 13/139 (9%)
Query: 39 DISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG--LSGTGIVVNVTVAVV 96
D+ TP + NGVVY ++NG L A++ +G ++W++ L + + G I + +
Sbjct: 246 DVDTTPIIVNGVVYALAYNGNLTALDLRSGQIMWKRELGSVNDFIVDGNRIYLVDQNDRL 305
Query: 97 VAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSS--------LEEALPADQCC 148
+A++ G +W TQ D R + + +Y G VG S + A Q
Sbjct: 306 LALTTDGGVTLW-TQSDLLHR--LLTAPVLYNGNLVVGDSEGYMHWVNPEDGHFVAQQKV 362
Query: 149 TFRGSLAKLDVRNGRIIWQ 167
G L V +GR++ Q
Sbjct: 363 DSSGFLTDPVVADGRLLIQ 381
>gi|398843068|ref|ZP_10600225.1| PQQ-dependent dehydrogenase, methanol/ethanol family [Pseudomonas
sp. GM102]
gi|398104218|gb|EJL94366.1| PQQ-dependent dehydrogenase, methanol/ethanol family [Pseudomonas
sp. GM102]
Length = 591
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 73/351 (20%), Positives = 135/351 (38%), Gaps = 75/351 (21%)
Query: 2 LNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAG----KDISATPAVANGVVYFPSWN 57
+ +G + +RY+ + L N V++LR W+F G + A P + +GV+Y
Sbjct: 45 VTNGLGVQGQRYSPLDTL-NVDNVKDLRPVWAFSFGGEKQRGQQAQPMIKDGVMYMTGSY 103
Query: 58 GYLYAVNAFNGALIWEQN-------------LSKLTGLSGTGIVVNVTVAVVVAVSRSNG 104
++AV+A G +W+ + +++ L G ++ A +VA+++ G
Sbjct: 104 SRVFAVDARTGRKLWQYDARLPDDIRPCCDVINRGVALYGDLVIFGTLDAKLVALNKDTG 163
Query: 105 ELVWSTQI-DPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGR 163
++VWS ++ D + I+ + V G G++ E + G + D +NG
Sbjct: 164 KVVWSKKVADHKEGYSISAAPLVINGKLITGVAGGEFGV--------VGKIEAYDPKNGS 215
Query: 164 IIWQT--------YMLPDNGGKRGGYSGAA--------VW---GSSPAIDVIRRQKQN-- 202
++W Y+ D G SG +W G++P + + N
Sbjct: 216 LLWSRPTVEGHMGYVYKDGKAVENGISGGEAGKTWPGDLWKTGGAAPWLGGYYDPETNLL 275
Query: 203 ---NQTTKPTHPDQCISSDIYANSIVALDIDSGRIAW---AKPLGGYDIFYFTCLVPNNP 256
P + ++Y++S +AL+ D G I W + P G+D LV N
Sbjct: 276 LFGTGNPAPWNSHLRPGDNLYSSSRLALNPDDGTIKWHFQSTPHDGWDYDGVNELVSFN- 334
Query: 257 DCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
S G+ ++GF + DR +G I
Sbjct: 335 --------------------YSEGGKEIKAAATADRNGFFYVLDRTNGKFI 365
>gi|427411689|ref|ZP_18901891.1| methanol/ethanol family PQQ-dependent dehydrogenase [Sphingobium
yanoikuyae ATCC 51230]
gi|425709979|gb|EKU73002.1| methanol/ethanol family PQQ-dependent dehydrogenase [Sphingobium
yanoikuyae ATCC 51230]
Length = 695
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 75/329 (22%), Positives = 125/329 (37%), Gaps = 68/329 (20%)
Query: 20 INPVTVRNLRLRW--SFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLS 77
IN V L L W G P +G++Y+ S ++AV+A G +W +
Sbjct: 47 INDHNVGRLGLAWYQDIEGGGSSLTAPIAVDGILYYASGYSVVHAVDAATGHELWTYDPQ 106
Query: 78 -------KLTGLSGT--------GIVVNVTVAVVVAVSRSNGELVWSTQ-IDPRPRSQIT 121
K+ G G+ + V ++A++ G +WSTQ I I+
Sbjct: 107 SWKVADKKMRGAWGSRGIAYDNGAVYVGTIDGRLIAINARTGHRLWSTQTIGKDDERYIS 166
Query: 122 MSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGY 181
+ V+ G +G + A RG + D + G+ +W+ Y +P G + G+
Sbjct: 167 GAPWVFNGKVLIGHGGADFA-------PIRGYVTAYDQKTGKQLWRFYTVP--GDPKLGF 217
Query: 182 SGAAV------W--------GSSPAIDVIRRQKQNNQ----TTKPTHPDQCISS-----D 218
A+ W G A + + + N+ + +Q I S +
Sbjct: 218 ENKAMAMAAKTWTGEWWKYGGGGTAWNAMAYDPKYNRIYIGVGNGSPWNQKIRSPGGGDN 277
Query: 219 IYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTIS 278
++ SIVALD D+G W Y T PG D + L +
Sbjct: 278 LFLCSIVALDADTGEYVW---------HYQTN---------PGETWDFNSAMDMELARLK 319
Query: 279 TNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
+G RDV++ K+GF + DR +G +I
Sbjct: 320 IDGHERDVLMHAPKNGFFYVIDRATGKLI 348
>gi|393782152|ref|ZP_10370341.1| hypothetical protein HMPREF1071_01209 [Bacteroides salyersiae
CL02T12C01]
gi|392674186|gb|EIY67635.1| hypothetical protein HMPREF1071_01209 [Bacteroides salyersiae
CL02T12C01]
Length = 622
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 119/297 (40%), Gaps = 37/297 (12%)
Query: 19 LINPVTVRNLRLRWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSK 78
+ +++ + +WSF++G I TPAVA+G+V F S + +YA+NA NG L WE
Sbjct: 317 FLTSYSLQKGKKQWSFHSGNRIVGTPAVADGIVVFGSADKKIYALNANNGELRWE----- 371
Query: 79 LTGLSGTGIVVNVTVAVVVAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSL 138
V V+ AV+ NG +V+ D R+ +G + Y G+
Sbjct: 372 ----------VEAQEPVLGAVTIDNG-IVYIGASDHTFRAIDLYTGKIKWT--YTGVKGY 418
Query: 139 EEALP---ADQCC--TFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYSGAAVWGSSPAI 193
E P D+ + +L L+ G +W+ G R +S AAVW +
Sbjct: 419 IETRPLIEEDKVIFGAWDNTLYALNKNTGEELWKW----TGGLTRMHFSPAAVWPVAANG 474
Query: 194 DVIRRQKQNNQTTKPTHPDQCI--SSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCL 251
V Q T + I + + L D R+ ++K + + Y T
Sbjct: 475 KVFITDPQRAMTAIDLATGETIWRTYQSTVRETIGLSADKKRV-YSKTMNDSIVCYSTQ- 532
Query: 252 VPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDIIW 308
+ P N+ + AP + + +G V+ K G +A + +G ++W
Sbjct: 533 -GDKPHQLWSSNVGFGYEHAPS-MQVEKDG----VMFGSTKGGLIFALEPLTGKVLW 583
>gi|26248876|ref|NP_754916.1| outer membrane protein assembly complex subunit YfgL [Escherichia
coli CFT073]
gi|91211838|ref|YP_541824.1| outer membrane protein assembly complex subunit YfgL [Escherichia
coli UTI89]
gi|117624741|ref|YP_853654.1| outer membrane protein assembly complex subunit YfgL [Escherichia
coli APEC O1]
gi|218559438|ref|YP_002392351.1| outer membrane protein assembly complex subunit YfgL [Escherichia
coli S88]
gi|218690632|ref|YP_002398844.1| outer membrane protein assembly complex subunit YfgL [Escherichia
coli ED1a]
gi|222157218|ref|YP_002557357.1| Lipoprotein yfgl [Escherichia coli LF82]
gi|227887547|ref|ZP_04005352.1| outer membrane protein assembly complex subunit YfgL [Escherichia
coli 83972]
gi|237705022|ref|ZP_04535503.1| outer membrane protein assembly complex subunit YfgL [Escherichia
sp. 3_2_53FAA]
gi|300940237|ref|ZP_07154835.1| outer membrane assembly lipoprotein YfgL [Escherichia coli MS 21-1]
gi|300981974|ref|ZP_07175820.1| outer membrane assembly lipoprotein YfgL [Escherichia coli MS 45-1]
gi|301047145|ref|ZP_07194240.1| outer membrane assembly lipoprotein YfgL [Escherichia coli MS
185-1]
gi|306814418|ref|ZP_07448580.1| outer membrane protein assembly complex subunit YfgL [Escherichia
coli NC101]
gi|331658657|ref|ZP_08359601.1| outer membrane assembly lipoprotein YfgL [Escherichia coli TA206]
gi|386600490|ref|YP_006101996.1| outer membrane assembly lipoprotein YfgL [Escherichia coli IHE3034]
gi|386603448|ref|YP_006109748.1| outer membrane protein assembly complex subunit YfgL [Escherichia
coli UM146]
gi|386640043|ref|YP_006106841.1| outer membrane assembly lipoprotein YfgL [Escherichia coli ABU
83972]
gi|387617828|ref|YP_006120850.1| outer membrane protein assembly complex subunit YfgL [Escherichia
coli O83:H1 str. NRG 857C]
gi|417085912|ref|ZP_11953222.1| outer membrane protein assembly complex subunit YfgL [Escherichia
coli cloneA_i1]
gi|417286518|ref|ZP_12073807.1| outer membrane assembly lipoprotein YfgL [Escherichia coli TW07793]
gi|419701356|ref|ZP_14228957.1| outer membrane biogenesis protein BamB [Escherichia coli SCI-07]
gi|419947489|ref|ZP_14463835.1| outer membrane protein assembly complex subunit YfgL [Escherichia
coli HM605]
gi|422358127|ref|ZP_16438788.1| outer membrane assembly lipoprotein YfgL [Escherichia coli MS
110-3]
gi|422364843|ref|ZP_16445353.1| outer membrane assembly lipoprotein YfgL [Escherichia coli MS
153-1]
gi|422380261|ref|ZP_16460440.1| outer membrane assembly lipoprotein YfgL [Escherichia coli MS 57-2]
gi|422752150|ref|ZP_16806054.1| outer membrane assembly lipoprotein YfgL [Escherichia coli H252]
gi|422755894|ref|ZP_16809718.1| outer membrane assembly lipoprotein YfgL [Escherichia coli H263]
gi|422837417|ref|ZP_16885390.1| lipoprotein yfgL [Escherichia coli H397]
gi|432358853|ref|ZP_19602073.1| lipoprotein yfgL [Escherichia coli KTE4]
gi|432363611|ref|ZP_19606775.1| lipoprotein yfgL [Escherichia coli KTE5]
gi|432382207|ref|ZP_19625150.1| lipoprotein yfgL [Escherichia coli KTE15]
gi|432388022|ref|ZP_19630909.1| lipoprotein yfgL [Escherichia coli KTE16]
gi|432412685|ref|ZP_19655347.1| lipoprotein yfgL [Escherichia coli KTE39]
gi|432432761|ref|ZP_19675188.1| lipoprotein yfgL [Escherichia coli KTE187]
gi|432437244|ref|ZP_19679632.1| lipoprotein yfgL [Escherichia coli KTE188]
gi|432457584|ref|ZP_19699766.1| lipoprotein yfgL [Escherichia coli KTE201]
gi|432466701|ref|ZP_19708788.1| lipoprotein yfgL [Escherichia coli KTE205]
gi|432496580|ref|ZP_19738376.1| lipoprotein yfgL [Escherichia coli KTE214]
gi|432505323|ref|ZP_19747046.1| lipoprotein yfgL [Escherichia coli KTE220]
gi|432514818|ref|ZP_19752040.1| lipoprotein yfgL [Escherichia coli KTE224]
gi|432524717|ref|ZP_19761844.1| lipoprotein yfgL [Escherichia coli KTE230]
gi|432569606|ref|ZP_19806116.1| lipoprotein yfgL [Escherichia coli KTE53]
gi|432574612|ref|ZP_19811090.1| lipoprotein yfgL [Escherichia coli KTE55]
gi|432584727|ref|ZP_19821119.1| lipoprotein yfgL [Escherichia coli KTE57]
gi|432588794|ref|ZP_19825150.1| lipoprotein yfgL [Escherichia coli KTE58]
gi|432593738|ref|ZP_19830053.1| lipoprotein yfgL [Escherichia coli KTE60]
gi|432598518|ref|ZP_19834792.1| lipoprotein yfgL [Escherichia coli KTE62]
gi|432608406|ref|ZP_19844590.1| lipoprotein yfgL [Escherichia coli KTE67]
gi|432612377|ref|ZP_19848539.1| lipoprotein yfgL [Escherichia coli KTE72]
gi|432647040|ref|ZP_19882829.1| lipoprotein yfgL [Escherichia coli KTE86]
gi|432652046|ref|ZP_19887799.1| lipoprotein yfgL [Escherichia coli KTE87]
gi|432656675|ref|ZP_19892378.1| lipoprotein yfgL [Escherichia coli KTE93]
gi|432681122|ref|ZP_19916495.1| lipoprotein yfgL [Escherichia coli KTE143]
gi|432699946|ref|ZP_19935099.1| lipoprotein yfgL [Escherichia coli KTE169]
gi|432733254|ref|ZP_19968083.1| lipoprotein yfgL [Escherichia coli KTE45]
gi|432746511|ref|ZP_19981176.1| lipoprotein yfgL [Escherichia coli KTE43]
gi|432755346|ref|ZP_19989894.1| lipoprotein yfgL [Escherichia coli KTE22]
gi|432760336|ref|ZP_19994830.1| lipoprotein yfgL [Escherichia coli KTE46]
gi|432779416|ref|ZP_20013649.1| lipoprotein yfgL [Escherichia coli KTE59]
gi|432784437|ref|ZP_20018616.1| lipoprotein yfgL [Escherichia coli KTE63]
gi|432788418|ref|ZP_20022548.1| lipoprotein yfgL [Escherichia coli KTE65]
gi|432802707|ref|ZP_20036676.1| lipoprotein yfgL [Escherichia coli KTE84]
gi|432821864|ref|ZP_20055555.1| lipoprotein yfgL [Escherichia coli KTE118]
gi|432828002|ref|ZP_20061651.1| lipoprotein yfgL [Escherichia coli KTE123]
gi|432845474|ref|ZP_20078274.1| lipoprotein yfgL [Escherichia coli KTE141]
gi|432905841|ref|ZP_20114641.1| lipoprotein yfgL [Escherichia coli KTE194]
gi|432938854|ref|ZP_20137097.1| lipoprotein yfgL [Escherichia coli KTE183]
gi|432972671|ref|ZP_20161537.1| lipoprotein yfgL [Escherichia coli KTE207]
gi|432974673|ref|ZP_20163510.1| lipoprotein yfgL [Escherichia coli KTE209]
gi|432986228|ref|ZP_20174949.1| lipoprotein yfgL [Escherichia coli KTE215]
gi|432996228|ref|ZP_20184814.1| lipoprotein yfgL [Escherichia coli KTE218]
gi|433000799|ref|ZP_20189323.1| lipoprotein yfgL [Escherichia coli KTE223]
gi|433005975|ref|ZP_20194403.1| lipoprotein yfgL [Escherichia coli KTE227]
gi|433008571|ref|ZP_20196987.1| lipoprotein yfgL [Escherichia coli KTE229]
gi|433039517|ref|ZP_20227115.1| lipoprotein yfgL [Escherichia coli KTE113]
gi|433058998|ref|ZP_20246041.1| lipoprotein yfgL [Escherichia coli KTE124]
gi|433073741|ref|ZP_20260392.1| lipoprotein yfgL [Escherichia coli KTE129]
gi|433083426|ref|ZP_20269882.1| lipoprotein yfgL [Escherichia coli KTE133]
gi|433088205|ref|ZP_20274575.1| lipoprotein yfgL [Escherichia coli KTE137]
gi|433102052|ref|ZP_20288132.1| lipoprotein yfgL [Escherichia coli KTE145]
gi|433116411|ref|ZP_20302200.1| lipoprotein yfgL [Escherichia coli KTE153]
gi|433121071|ref|ZP_20306741.1| lipoprotein yfgL [Escherichia coli KTE157]
gi|433126081|ref|ZP_20311636.1| lipoprotein yfgL [Escherichia coli KTE160]
gi|433140149|ref|ZP_20325402.1| lipoprotein yfgL [Escherichia coli KTE167]
gi|433145115|ref|ZP_20330256.1| lipoprotein yfgL [Escherichia coli KTE168]
gi|433150066|ref|ZP_20335084.1| lipoprotein yfgL [Escherichia coli KTE174]
gi|433154593|ref|ZP_20339531.1| lipoprotein yfgL [Escherichia coli KTE176]
gi|433164406|ref|ZP_20349141.1| lipoprotein yfgL [Escherichia coli KTE179]
gi|433169480|ref|ZP_20354105.1| lipoprotein yfgL [Escherichia coli KTE180]
gi|433184216|ref|ZP_20368461.1| lipoprotein yfgL [Escherichia coli KTE85]
gi|433189252|ref|ZP_20373349.1| lipoprotein yfgL [Escherichia coli KTE88]
gi|433208645|ref|ZP_20392319.1| lipoprotein yfgL [Escherichia coli KTE97]
gi|433213429|ref|ZP_20397019.1| lipoprotein yfgL [Escherichia coli KTE99]
gi|442608258|ref|ZP_21023018.1| Outer membrane protein YfgL, lipoprotein component of the protein
assembly complex (forms a complex with YaeT, YfiO, and
NlpB) [Escherichia coli Nissle 1917]
gi|26109282|gb|AAN81484.1|AE016764_166 Hypothetical protein yfgL [Escherichia coli CFT073]
gi|91073412|gb|ABE08293.1| hypothetical protein YfgL [Escherichia coli UTI89]
gi|115513865|gb|ABJ01940.1| putative dehydrogenase [Escherichia coli APEC O1]
gi|218366207|emb|CAR03955.1| protein assembly complex, lipoprotein component [Escherichia coli
S88]
gi|218428196|emb|CAR09113.2| protein assembly complex, lipoprotein component [Escherichia coli
ED1a]
gi|222034223|emb|CAP76964.1| Lipoprotein yfgl [Escherichia coli LF82]
gi|226901388|gb|EEH87647.1| outer membrane protein assembly complex subunit YfgL [Escherichia
sp. 3_2_53FAA]
gi|227835897|gb|EEJ46363.1| outer membrane protein assembly complex subunit YfgL [Escherichia
coli 83972]
gi|294491571|gb|ADE90327.1| outer membrane assembly lipoprotein YfgL [Escherichia coli IHE3034]
gi|300300931|gb|EFJ57316.1| outer membrane assembly lipoprotein YfgL [Escherichia coli MS
185-1]
gi|300408869|gb|EFJ92407.1| outer membrane assembly lipoprotein YfgL [Escherichia coli MS 45-1]
gi|300454933|gb|EFK18426.1| outer membrane assembly lipoprotein YfgL [Escherichia coli MS 21-1]
gi|305851812|gb|EFM52264.1| outer membrane protein assembly complex subunit YfgL [Escherichia
coli NC101]
gi|307554535|gb|ADN47310.1| outer membrane assembly lipoprotein YfgL [Escherichia coli ABU
83972]
gi|307625932|gb|ADN70236.1| outer membrane protein assembly complex subunit YfgL [Escherichia
coli UM146]
gi|312947089|gb|ADR27916.1| outer membrane protein assembly complex subunit YfgL [Escherichia
coli O83:H1 str. NRG 857C]
gi|315288064|gb|EFU47464.1| outer membrane assembly lipoprotein YfgL [Escherichia coli MS
110-3]
gi|315292448|gb|EFU51800.1| outer membrane assembly lipoprotein YfgL [Escherichia coli MS
153-1]
gi|323949172|gb|EGB45063.1| outer membrane assembly lipoprotein YfgL [Escherichia coli H252]
gi|323955753|gb|EGB51511.1| outer membrane assembly lipoprotein YfgL [Escherichia coli H263]
gi|324008520|gb|EGB77739.1| outer membrane assembly lipoprotein YfgL [Escherichia coli MS 57-2]
gi|331054322|gb|EGI26349.1| outer membrane assembly lipoprotein YfgL [Escherichia coli TA206]
gi|355350890|gb|EHG00085.1| outer membrane protein assembly complex subunit YfgL [Escherichia
coli cloneA_i1]
gi|371615233|gb|EHO03661.1| lipoprotein yfgL [Escherichia coli H397]
gi|380347557|gb|EIA35844.1| outer membrane biogenesis protein BamB [Escherichia coli SCI-07]
gi|386249977|gb|EII96146.1| outer membrane assembly lipoprotein YfgL [Escherichia coli TW07793]
gi|388410497|gb|EIL70721.1| outer membrane protein assembly complex subunit YfgL [Escherichia
coli HM605]
gi|430876273|gb|ELB99792.1| lipoprotein yfgL [Escherichia coli KTE4]
gi|430885816|gb|ELC08686.1| lipoprotein yfgL [Escherichia coli KTE5]
gi|430905525|gb|ELC27134.1| lipoprotein yfgL [Escherichia coli KTE16]
gi|430907682|gb|ELC29180.1| lipoprotein yfgL [Escherichia coli KTE15]
gi|430934540|gb|ELC54895.1| lipoprotein yfgL [Escherichia coli KTE39]
gi|430952129|gb|ELC71336.1| lipoprotein yfgL [Escherichia coli KTE187]
gi|430962575|gb|ELC80432.1| lipoprotein yfgL [Escherichia coli KTE188]
gi|430981591|gb|ELC98318.1| lipoprotein yfgL [Escherichia coli KTE201]
gi|430992984|gb|ELD09343.1| lipoprotein yfgL [Escherichia coli KTE205]
gi|431023838|gb|ELD37033.1| lipoprotein yfgL [Escherichia coli KTE214]
gi|431037673|gb|ELD48649.1| lipoprotein yfgL [Escherichia coli KTE220]
gi|431041204|gb|ELD51735.1| lipoprotein yfgL [Escherichia coli KTE224]
gi|431051168|gb|ELD60843.1| lipoprotein yfgL [Escherichia coli KTE230]
gi|431099096|gb|ELE04397.1| lipoprotein yfgL [Escherichia coli KTE53]
gi|431107059|gb|ELE11247.1| lipoprotein yfgL [Escherichia coli KTE55]
gi|431115481|gb|ELE18984.1| lipoprotein yfgL [Escherichia coli KTE57]
gi|431121127|gb|ELE24125.1| lipoprotein yfgL [Escherichia coli KTE58]
gi|431127066|gb|ELE29381.1| lipoprotein yfgL [Escherichia coli KTE60]
gi|431130031|gb|ELE32140.1| lipoprotein yfgL [Escherichia coli KTE62]
gi|431137350|gb|ELE39197.1| lipoprotein yfgL [Escherichia coli KTE67]
gi|431148551|gb|ELE49842.1| lipoprotein yfgL [Escherichia coli KTE72]
gi|431179695|gb|ELE79587.1| lipoprotein yfgL [Escherichia coli KTE86]
gi|431189901|gb|ELE89318.1| lipoprotein yfgL [Escherichia coli KTE87]
gi|431190541|gb|ELE89940.1| lipoprotein yfgL [Escherichia coli KTE93]
gi|431219852|gb|ELF17241.1| lipoprotein yfgL [Escherichia coli KTE143]
gi|431242922|gb|ELF37312.1| lipoprotein yfgL [Escherichia coli KTE169]
gi|431274463|gb|ELF65520.1| lipoprotein yfgL [Escherichia coli KTE45]
gi|431291049|gb|ELF81572.1| lipoprotein yfgL [Escherichia coli KTE43]
gi|431301776|gb|ELF90977.1| lipoprotein yfgL [Escherichia coli KTE22]
gi|431307990|gb|ELF96280.1| lipoprotein yfgL [Escherichia coli KTE46]
gi|431326232|gb|ELG13594.1| lipoprotein yfgL [Escherichia coli KTE59]
gi|431328860|gb|ELG16164.1| lipoprotein yfgL [Escherichia coli KTE63]
gi|431336613|gb|ELG23721.1| lipoprotein yfgL [Escherichia coli KTE65]
gi|431347849|gb|ELG34726.1| lipoprotein yfgL [Escherichia coli KTE84]
gi|431367516|gb|ELG53993.1| lipoprotein yfgL [Escherichia coli KTE118]
gi|431371490|gb|ELG57199.1| lipoprotein yfgL [Escherichia coli KTE123]
gi|431394330|gb|ELG77866.1| lipoprotein yfgL [Escherichia coli KTE141]
gi|431431912|gb|ELH13686.1| lipoprotein yfgL [Escherichia coli KTE194]
gi|431462840|gb|ELH43047.1| lipoprotein yfgL [Escherichia coli KTE183]
gi|431480809|gb|ELH60525.1| lipoprotein yfgL [Escherichia coli KTE207]
gi|431488405|gb|ELH68040.1| lipoprotein yfgL [Escherichia coli KTE209]
gi|431499122|gb|ELH78303.1| lipoprotein yfgL [Escherichia coli KTE215]
gi|431505258|gb|ELH83880.1| lipoprotein yfgL [Escherichia coli KTE218]
gi|431508191|gb|ELH86465.1| lipoprotein yfgL [Escherichia coli KTE223]
gi|431513673|gb|ELH91755.1| lipoprotein yfgL [Escherichia coli KTE227]
gi|431523186|gb|ELI00330.1| lipoprotein yfgL [Escherichia coli KTE229]
gi|431550629|gb|ELI24618.1| lipoprotein yfgL [Escherichia coli KTE113]
gi|431568531|gb|ELI41504.1| lipoprotein yfgL [Escherichia coli KTE124]
gi|431587109|gb|ELI58490.1| lipoprotein yfgL [Escherichia coli KTE129]
gi|431601550|gb|ELI71066.1| lipoprotein yfgL [Escherichia coli KTE133]
gi|431603982|gb|ELI73398.1| lipoprotein yfgL [Escherichia coli KTE137]
gi|431618331|gb|ELI87305.1| lipoprotein yfgL [Escherichia coli KTE145]
gi|431633232|gb|ELJ01513.1| lipoprotein yfgL [Escherichia coli KTE153]
gi|431641771|gb|ELJ09505.1| lipoprotein yfgL [Escherichia coli KTE157]
gi|431643593|gb|ELJ11284.1| lipoprotein yfgL [Escherichia coli KTE160]
gi|431659153|gb|ELJ26051.1| lipoprotein yfgL [Escherichia coli KTE167]
gi|431660744|gb|ELJ27607.1| lipoprotein yfgL [Escherichia coli KTE168]
gi|431669860|gb|ELJ36225.1| lipoprotein yfgL [Escherichia coli KTE174]
gi|431673115|gb|ELJ39345.1| lipoprotein yfgL [Escherichia coli KTE176]
gi|431686681|gb|ELJ52241.1| lipoprotein yfgL [Escherichia coli KTE179]
gi|431686828|gb|ELJ52384.1| lipoprotein yfgL [Escherichia coli KTE180]
gi|431705169|gb|ELJ69767.1| lipoprotein yfgL [Escherichia coli KTE88]
gi|431705313|gb|ELJ69910.1| lipoprotein yfgL [Escherichia coli KTE85]
gi|431729930|gb|ELJ93549.1| lipoprotein yfgL [Escherichia coli KTE97]
gi|431734454|gb|ELJ97855.1| lipoprotein yfgL [Escherichia coli KTE99]
gi|441710863|emb|CCQ08995.1| Outer membrane protein YfgL, lipoprotein component of the protein
assembly complex (forms a complex with YaeT, YfiO, and
NlpB) [Escherichia coli Nissle 1917]
Length = 392
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 94/226 (41%), Gaps = 24/226 (10%)
Query: 44 PAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG--------------LSGTGIVV 89
PA+A+ VVY G + A+NA +G IW NL++ G +SG + +
Sbjct: 65 PALADNVVYAADRAGLVKALNADDGKEIWSVNLAEKDGWFSKDPALLSGGVTVSGGHVYI 124
Query: 90 NVTVAVVVAVSRSNGELVWSTQIDPRPRSQ-ITMSGSVYMGAFYVGLSSLEEALPADQCC 148
A V A++ S+G + W T++ S+ + G V + L +L EA A +
Sbjct: 125 GTEKAQVYALNTSDGTVAWQTKVAGEALSRPVVSDGLVLIHTSNGQLQALNEADGAVK-W 183
Query: 149 TFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYS------GAAVWGS--SPAIDVIRRQK 200
T + L +R + GG G S G +W S A +
Sbjct: 184 TVNLDMPSLSLRGESAPATAFGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDR 243
Query: 201 QNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIF 246
++ T P + + + Y ++ ALD+ SG+I W + LG + F
Sbjct: 244 LSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQIMWKRELGSVNDF 289
Score = 42.0 bits (97), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 63/157 (40%), Gaps = 34/157 (21%)
Query: 32 WSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLS----KLTGLSGTGI 87
W + + P V++G+V + NG L A+N +GA+ W NL L G S
Sbjct: 143 WQTKVAGEALSRPVVSDGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPAT 202
Query: 88 VVNVTVA-----VVVAVSRSNGELVW---------STQIDPRPRSQITMSGSVYMGAFYV 133
V V AV G+++W ST+ID S + + V G +
Sbjct: 203 AFGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEID--RLSDVDTTPVVVNGVVF- 259
Query: 134 GLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYM 170
+ G+L LD+R+G+I+W+ +
Sbjct: 260 -------------ALAYNGNLTALDLRSGQIMWKREL 283
Score = 39.3 bits (90), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 61/131 (46%), Gaps = 19/131 (14%)
Query: 39 DISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG--LSGTGIVVNVTVAVV 96
D+ TP V NGVV+ ++NG L A++ +G ++W++ L + + G I + V
Sbjct: 246 DVDTTPVVVNGVVFALAYNGNLTALDLRSGQIMWKRELGSVNDFIVDGNRIYLVDQNDRV 305
Query: 97 VAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAK 156
+A++ G +W TQ D R + S +Y G VG S G L
Sbjct: 306 MALTIDGGVTLW-TQSDLLHR--LLTSPVLYNGNLVVGDS--------------EGYLHW 348
Query: 157 LDVRNGRIIWQ 167
++V +GR + Q
Sbjct: 349 INVEDGRFVAQ 359
>gi|456353789|dbj|BAM88234.1| putative quinoprotein ethanol dehydrogenase [Agromonas
oligotrophica S58]
Length = 554
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 74/332 (22%), Positives = 128/332 (38%), Gaps = 54/332 (16%)
Query: 2 LNHGGDLNNRRYAYGEVLINPVTVRNLRLRW--SFYAGKDISATPAVANGVVYFPSWNGY 59
LN+G N +R++ IN ++L W SF + + P V GV+Y + N
Sbjct: 37 LNYGMGYNLQRFS-PLTQINKDNAKSLVPVWNYSFSDDRSEESQPLVYQGVLYVTTHNAT 95
Query: 60 LYAVNAFNGALIWEQNL---------------SKLTGLSGTGIVVNVTVAVVVAVSRSNG 104
+ AV+A G IW+ + ++ L + A V+A+ G
Sbjct: 96 M-AVDAKTGKQIWKSKIDYPAETPRVVCCGIINRGAALFDGKLFRTTLDANVIALDAKTG 154
Query: 105 ELVWSTQI-DPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGR 163
+ +W + D + +T++ V G G+S E RG + D G+
Sbjct: 155 KELWRQKAADIKEGYSMTVAPLVADGVVLTGISGAEFGT--------RGFIDGWDPATGK 206
Query: 164 IIWQTYMLPDNGGKRGGYSGAAVW---GSSPAIDVIRRQKQNN-----QTTKPTHPDQCI 215
+W+T+ +P G W G S I +QN P +
Sbjct: 207 HLWRTHTVPSPDEPGGDTWKGDTWKLGGGSTWITGSYDPEQNTVFWGVGNPGPFNAAVRP 266
Query: 216 SSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLL 275
++Y S++ALD +G+ W F F+ PNNP D D +L
Sbjct: 267 GDNLYTCSVLALDPKTGKTKWH--------FQFS---PNNP-------FDYDAVAEMVLA 308
Query: 276 TISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
++ G+ V++ ++GF + DR +G ++
Sbjct: 309 DMNVEGKPTKVLMNANRNGFFYVLDRTNGKLL 340
>gi|170681614|ref|YP_001744700.1| outer membrane protein assembly complex subunit YfgL [Escherichia
coli SMS-3-5]
gi|422829999|ref|ZP_16878161.1| lipoprotein yfgL [Escherichia coli B093]
gi|170519332|gb|ACB17510.1| outer membrane assembly lipoprotein YfgL [Escherichia coli SMS-3-5]
gi|371607186|gb|EHN95764.1| lipoprotein yfgL [Escherichia coli B093]
Length = 392
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 94/226 (41%), Gaps = 24/226 (10%)
Query: 44 PAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG--------------LSGTGIVV 89
PA+A+ VVY G + A+NA +G IW NL++ G +SG + +
Sbjct: 65 PALADNVVYAADRAGLVKALNADDGKEIWSVNLAEKDGWFSKDPALLSGGVTVSGGHVYI 124
Query: 90 NVTVAVVVAVSRSNGELVWSTQIDPRPRSQ-ITMSGSVYMGAFYVGLSSLEEALPADQCC 148
A V A++ S+G + W T++ S+ + G V + L +L EA A +
Sbjct: 125 GTEKAQVYALNTSDGTVAWQTKVAGEALSRPVVSDGLVLIHTSNGQLQALNEADGAVK-W 183
Query: 149 TFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYS------GAAVWGS--SPAIDVIRRQK 200
T + L +R + GG G S G +W S A +
Sbjct: 184 TVNLDMPSLSLRGESAPATAFGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDR 243
Query: 201 QNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIF 246
++ T P + + + Y ++ ALD+ SG+I W + LG + F
Sbjct: 244 LSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQIMWKRELGSVNDF 289
Score = 42.0 bits (97), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 63/157 (40%), Gaps = 34/157 (21%)
Query: 32 WSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLS----KLTGLSGTGI 87
W + + P V++G+V + NG L A+N +GA+ W NL L G S
Sbjct: 143 WQTKVAGEALSRPVVSDGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPAT 202
Query: 88 VVNVTVA-----VVVAVSRSNGELVW---------STQIDPRPRSQITMSGSVYMGAFYV 133
V V AV G+++W ST+ID S + + V G +
Sbjct: 203 AFGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEID--RLSDVDTTPVVVNGVVF- 259
Query: 134 GLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYM 170
+ G+L LD+R+G+I+W+ +
Sbjct: 260 -------------ALAYNGNLTALDLRSGQIMWKREL 283
Score = 39.3 bits (90), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 61/131 (46%), Gaps = 19/131 (14%)
Query: 39 DISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG--LSGTGIVVNVTVAVV 96
D+ TP V NGVV+ ++NG L A++ +G ++W++ L + + G I + V
Sbjct: 246 DVDTTPVVVNGVVFALAYNGNLTALDLRSGQIMWKRELGSVNDFIVDGNRIYLVDQNDRV 305
Query: 97 VAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAK 156
+A++ G +W TQ D R + S +Y G VG S G L
Sbjct: 306 MALTIDGGVTLW-TQSDLLHR--LLTSPVLYNGNLVVGDS--------------EGYLHW 348
Query: 157 LDVRNGRIIWQ 167
++V +GR + Q
Sbjct: 349 INVEDGRFVAQ 359
>gi|254281741|ref|ZP_04956709.1| alcohol dehydrogenase (acceptor) [gamma proteobacterium NOR51-B]
gi|219677944|gb|EED34293.1| alcohol dehydrogenase (acceptor) [gamma proteobacterium NOR51-B]
Length = 722
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 76/339 (22%), Positives = 121/339 (35%), Gaps = 73/339 (21%)
Query: 15 YGEVLINPVTVRN------LRLRWSFYAGKDISAT-PAVANGVVYFPSWNGYLYAVNAFN 67
YGE +P+ V N L L W F K S T P +G ++F ++A+++
Sbjct: 78 YGEQHFSPLKVINRGSVSELSLDWFFDLPKGNSVTGPLQIDGKLFFAPGYSEVHALDSVT 137
Query: 68 GALIW-------EQNLSKLT---GLSGTG-----IVVNVTVAVVVAVSRSNGELVWSTQ- 111
G L+W E+ KL G G G I ++A+ G+ VWS
Sbjct: 138 GQLLWTFDAKAAERAGYKLRQGWGSRGLGWWNGKIYTGTQDGRLIAIDADTGKEVWSVMT 197
Query: 112 IDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYML 171
+DP I+ + G +G + RG + D G+ +W+ Y +
Sbjct: 198 VDPDDMRYISGPPRAFNGKVIIGHGGAD-------AGNVRGYVTAYDAETGQRLWRFYTV 250
Query: 172 PDNGG--------------------KRGGYSGAAVWGS---SPAIDVIRRQKQNNQTTKP 208
P N + GG G VW + +D I N
Sbjct: 251 PGNPADGFENDAMRMAAKTWAGEWWRFGG--GGTVWNAITYDEQLDQIYLGTGNGAPWNH 308
Query: 209 THPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADF 268
T + +++ +SIVAL+ +SG+ W + PG D +
Sbjct: 309 TIRSKGEGDNLFLSSIVALNAESGKYIW------------------HYQTNPGETWDYNA 350
Query: 269 GEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
L + G R V++ K+GF + DR G +I
Sbjct: 351 AMDMQLAELEIAGAPRKVLMTAPKNGFFYVIDRVDGKLI 389
>gi|269837275|ref|YP_003319503.1| serine/threonine protein kinase [Sphaerobacter thermophilus DSM
20745]
gi|269786538|gb|ACZ38681.1| serine/threonine protein kinase [Sphaerobacter thermophilus DSM
20745]
Length = 638
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 63/141 (44%), Gaps = 22/141 (15%)
Query: 30 LRWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTGLS----GT 85
LRW G+ + ++PA +V +G +YAV+ NGA W S+ S G
Sbjct: 483 LRWRTQLGRPVLSSPAAGGNIVVVGCTDGAIYAVDIDNGARRWAFQTSRPIIASPRIVGD 542
Query: 86 GIVVNVTVAVVVAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPAD 145
+V+ T + A+ R +G L+WS QI +QIT S ++ YVG
Sbjct: 543 LVVIGSTDGTLYALERRDGSLLWSQQIA----NQITSSAAIDGARCYVG----------- 587
Query: 146 QCCTFRGSLAKLDVRNGRIIW 166
T G + L + +G+ +W
Sbjct: 588 ---TVDGYVVCLQLDDGQTLW 605
Score = 45.8 bits (107), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 60/143 (41%), Gaps = 22/143 (15%)
Query: 29 RLRWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWE----QNLSKLTGLSG 84
R+ W+ G ++ T AVA Y S++ +LYAVN +G ++W + + + G
Sbjct: 322 RIVWTVQTGDEVRGTAAVAGSTAYIGSYDQHLYAVNPQDGGILWRFRANRGIVARPLVHG 381
Query: 85 TGIVVNVTVAVVVAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPA 144
+VV V A+ +G L+WS + RS S + Y A VG
Sbjct: 382 DLVVVGAEDHTVYALRAVSGRLIWSFRTAMPVRS----SAAAYGDAIVVGSDD------- 430
Query: 145 DQCCTFRGSLAKLDVRNGRIIWQ 167
G LD+ G ++W+
Sbjct: 431 -------GYCYCLDLEQGNLLWR 446
Score = 45.4 bits (106), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 46/97 (47%), Gaps = 4/97 (4%)
Query: 20 INPVTVRNLRLRWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKL 79
I V + N RW+F + I A+P + +V S +G LYA+ +G+L+W Q ++
Sbjct: 513 IYAVDIDNGARRWAFQTSRPIIASPRIVGDLVVIGSTDGTLYALERRDGSLLWSQQIANQ 572
Query: 80 ----TGLSGTGIVVNVTVAVVVAVSRSNGELVWSTQI 112
+ G V VV + +G+ +W+ ++
Sbjct: 573 ITSSAAIDGARCYVGTVDGYVVCLQLDDGQTLWTQRL 609
>gi|387131142|ref|YP_006294032.1| Methanol dehydrogenase large subunit protein [Methylophaga sp.
JAM7]
gi|386272431|gb|AFJ03345.1| Methanol dehydrogenase large subunit protein [Methylophaga sp.
JAM7]
Length = 592
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 81/360 (22%), Positives = 139/360 (38%), Gaps = 87/360 (24%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAG--KDISATPAVANGVVY----FP 54
W+ G+ N RY+ IN V++L + WSF G + V +G +Y FP
Sbjct: 34 WVMPAGNYANHRYST-LTDINKENVKDLNMAWSFSTGVLRGHEGNALVMDGTMYVHTPFP 92
Query: 55 SWNGYLYAVNAFN-GALIWE----QNLSKLT----------GLS--GTGIVVNVTVAVVV 97
+ ++A++ N GA+ W+ QN + GLS I +N +V
Sbjct: 93 N---IVFALDLNNDGAIKWKYEPSQNYDETVPVMCCDTVNRGLSYADGKIFLNQADTTLV 149
Query: 98 AVSRSNGELVWSTQ-IDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAK 156
A+ GE VWS + D + + T + V+ VG+S E + RG +
Sbjct: 150 ALDMETGEEVWSDKRDDAKVGATSTAAAHVFDDKIIVGISGGEFGV--------RGYVQA 201
Query: 157 LDVRNGRIIWQTY-------MLPDN-------------------GGKRGGYSGAAVWG-- 188
D+ +G ++++ Y ML D G + G WG
Sbjct: 202 YDL-DGNVVYKAYSTGPDDEMLIDGEKTTTMLKPIGKDSSLKSWQGDQWKIGGGTTWGWY 260
Query: 189 -SSPAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFY 247
P +++ N T P Q + ++ +I A D+D+G W YD +
Sbjct: 261 SYDPDLNLFYYGSGNPSTWNPV---QRPGDNKWSMTIFARDLDTGMAKWVYQKTPYDEWD 317
Query: 248 FTCLVPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
+ + N +L+ NG+ R +V ++GFA+ DR +G+++
Sbjct: 318 YDGVNEN------------------ILVDQKVNGKMRKTLVNFDRNGFAYTLDRVNGELL 359
>gi|284036052|ref|YP_003385982.1| PQQ-dependent enzyme-like protein [Spirosoma linguale DSM 74]
gi|283815345|gb|ADB37183.1| PQQ-dependent enzyme-like protein [Spirosoma linguale DSM 74]
Length = 701
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 70/340 (20%), Positives = 121/340 (35%), Gaps = 84/340 (24%)
Query: 20 INPVTVRNLRLRWSFYAG--------KDISATPAVANGVVYFPSWNGYLYAVNAFNGALI 71
+NP V L++ W + +G I P + +GV+Y S +A++A G I
Sbjct: 45 LNPGNVAGLKVAWEYASGGVDTLKNNTQIQCNPLIVDGVLYGVSAGSQAFALDAATGKEI 104
Query: 72 WEQNLSKLTGLSGTGIVVNVTVAVVVAVSRSNGELVWSTQIDPRPRSQIT---------- 121
W+ + T + V T + + G L+++ +D R +
Sbjct: 105 WKTAFTDDTFAMNSRGVTYWTDGRQARIFFAYGSLLYA--LDARTGKPVVSFGKGGKINL 162
Query: 122 ----------------MSGSVYMGAFYVG--LSSLEEALPADQCCTFRGSLAKLDVRNGR 163
G +Y +G +S + ALP D + D+ GR
Sbjct: 163 KDGLARPGADEYVVSNTPGVIYKNLLIMGHRVSEVAPALPGD--------VRAYDLHTGR 214
Query: 164 IIWQTYMLPDNGGKRGGYSGAAVWGSSPAID----------VIRRQKQNNQTTKPTHPDQ 213
++W + +P G GA W ++ I RQ+ T
Sbjct: 215 LVWTFHTIP-----HPGEYGADTWPKDGHLNFGGANNWMGMAIDRQRGIVYVPTGTAAFD 269
Query: 214 CISS-----DIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADF 268
S +++ NS++ALD +G+ W +DI+ D D
Sbjct: 270 LYGSTRPGKNLFGNSLIALDAATGKRRWHFQTIHHDIW------------------DRDI 311
Query: 269 GEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDIIW 308
P L T+ +G+ D V + K GF + FDR +G ++
Sbjct: 312 PAPPNLFTVVHDGKKVDAVSVLSKQGFLFVFDRVTGKPLF 351
>gi|262275102|ref|ZP_06052913.1| methanol dehydrogenase large subunit protein [Grimontia hollisae
CIP 101886]
gi|262221665|gb|EEY72979.1| methanol dehydrogenase large subunit protein [Grimontia hollisae
CIP 101886]
Length = 602
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 74/358 (20%), Positives = 136/358 (37%), Gaps = 84/358 (23%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAG--KDISATPAVANGVVY----FP 54
W+ GGD + RY+ + IN V++L++ W+F G + P V +Y FP
Sbjct: 43 WVMWGGDYSGTRYSPLK-QINAKNVKDLQVAWTFSTGVLRGHEGGPLVLGDTMYIHTPFP 101
Query: 55 SWNGYLYAVNAFNGALIWE---------------QNLSKLTGLSGTGIVVNVTVAVVVAV 99
+ ++A++ AL WE +++ + I + +VA+
Sbjct: 102 N---KVFAIDLNRKALKWEYEPKQDSSVIAVMCCDTVNRGLAYADGKIFLQQADTTLVAL 158
Query: 100 SRSNGELVWST-QIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLD 158
+ G++VW DP+ + T + + G+S E + RG L +
Sbjct: 159 DQKTGKVVWKVVNGDPKVGASNTNAPLIVKDKIITGVSGGEFGV--------RGYLTAYN 210
Query: 159 VRNGRIIWQTY-------MLPDNG-------------------GKRGGYSGAAVWG---S 189
+++G + W+ Y ML D G + G WG
Sbjct: 211 IKDGSLAWRAYSTGPDEEMLVDPEKTTELLKPIGKDASLKTWEGDQWKIGGGTTWGWYTY 270
Query: 190 SPAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFT 249
P +++I N T P+ Q + Y+ +I+A D D+G W ++ T
Sbjct: 271 DPELNLIYYGTGNPSTWNPS---QRPGDNKYSMTIMARDADTGMAKW--------LYQMT 319
Query: 250 CLVPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
P D D +L+ G+ R ++V ++GF + DR +G+++
Sbjct: 320 ----------PHDEWDYDGVNEMILVDKKFKGKDRKLLVHFDRNGFGYTLDRVTGELL 367
>gi|110642677|ref|YP_670407.1| outer membrane protein assembly complex subunit YfgL [Escherichia
coli 536]
gi|191172619|ref|ZP_03034158.1| outer membrane assembly lipoprotein YfgL [Escherichia coli F11]
gi|215487862|ref|YP_002330293.1| outer membrane protein assembly complex subunit YfgL [Escherichia
coli O127:H6 str. E2348/69]
gi|300998068|ref|ZP_07181928.1| outer membrane assembly lipoprotein YfgL [Escherichia coli MS
200-1]
gi|312965428|ref|ZP_07779660.1| outer membrane assembly lipoprotein YfgL [Escherichia coli 2362-75]
gi|331648209|ref|ZP_08349299.1| outer membrane assembly lipoprotein YfgL [Escherichia coli M605]
gi|386620119|ref|YP_006139699.1| putative outer membrane protein [Escherichia coli NA114]
gi|387830409|ref|YP_003350346.1| putative dehydrogenase [Escherichia coli SE15]
gi|415840209|ref|ZP_11521698.1| outer membrane assembly lipoprotein YfgL [Escherichia coli RN587/1]
gi|416335666|ref|ZP_11672359.1| outer membrane protein assembly complex subunit YfgL [Escherichia
coli WV_060327]
gi|417282329|ref|ZP_12069629.1| outer membrane assembly lipoprotein YfgL [Escherichia coli 3003]
gi|417663069|ref|ZP_12312650.1| outer membrane protein YfgL [Escherichia coli AA86]
gi|417756769|ref|ZP_12404843.1| outer membrane assembly lipoprotein YfgL [Escherichia coli DEC2B]
gi|418997762|ref|ZP_13545356.1| outer membrane assembly lipoprotein YfgL [Escherichia coli DEC1A]
gi|419003066|ref|ZP_13550590.1| outer membrane assembly lipoprotein YfgL [Escherichia coli DEC1B]
gi|419008749|ref|ZP_13556180.1| outer membrane assembly lipoprotein YfgL [Escherichia coli DEC1C]
gi|419014423|ref|ZP_13561771.1| outer membrane assembly lipoprotein YfgL [Escherichia coli DEC1D]
gi|419019441|ref|ZP_13566747.1| outer membrane assembly lipoprotein YfgL [Escherichia coli DEC1E]
gi|419024941|ref|ZP_13572167.1| outer membrane assembly lipoprotein YfgL [Escherichia coli DEC2A]
gi|419029978|ref|ZP_13577139.1| outer membrane assembly lipoprotein YfgL [Escherichia coli DEC2C]
gi|419035186|ref|ZP_13582272.1| outer membrane assembly lipoprotein YfgL [Escherichia coli DEC2D]
gi|419040664|ref|ZP_13587692.1| outer membrane assembly lipoprotein YfgL [Escherichia coli DEC2E]
gi|419914740|ref|ZP_14433128.1| outer membrane protein assembly complex subunit YfgL [Escherichia
coli KD1]
gi|422367771|ref|ZP_16448197.1| outer membrane assembly lipoprotein YfgL [Escherichia coli MS 16-3]
gi|422377487|ref|ZP_16457726.1| outer membrane assembly lipoprotein YfgL [Escherichia coli MS 60-1]
gi|425278913|ref|ZP_18670151.1| outer membrane assembly lipoprotein YfgL [Escherichia coli
ARS4.2123]
gi|425301367|ref|ZP_18691258.1| outer membrane assembly lipoprotein YfgL [Escherichia coli 07798]
gi|432398468|ref|ZP_19641247.1| lipoprotein yfgL [Escherichia coli KTE25]
gi|432407593|ref|ZP_19650301.1| lipoprotein yfgL [Escherichia coli KTE28]
gi|432422864|ref|ZP_19665408.1| lipoprotein yfgL [Escherichia coli KTE178]
gi|432441978|ref|ZP_19684318.1| lipoprotein yfgL [Escherichia coli KTE189]
gi|432447084|ref|ZP_19689383.1| lipoprotein yfgL [Escherichia coli KTE191]
gi|432471839|ref|ZP_19713883.1| lipoprotein yfgL [Escherichia coli KTE206]
gi|432501004|ref|ZP_19742761.1| lipoprotein yfgL [Escherichia coli KTE216]
gi|432554559|ref|ZP_19791280.1| lipoprotein yfgL [Escherichia coli KTE47]
gi|432559727|ref|ZP_19796396.1| lipoprotein yfgL [Escherichia coli KTE49]
gi|432695331|ref|ZP_19930529.1| lipoprotein yfgL [Escherichia coli KTE162]
gi|432711532|ref|ZP_19946590.1| lipoprotein yfgL [Escherichia coli KTE6]
gi|432714252|ref|ZP_19949289.1| lipoprotein yfgL [Escherichia coli KTE8]
gi|432723988|ref|ZP_19958905.1| lipoprotein yfgL [Escherichia coli KTE17]
gi|432728569|ref|ZP_19963447.1| lipoprotein yfgL [Escherichia coli KTE18]
gi|432742253|ref|ZP_19976972.1| lipoprotein yfgL [Escherichia coli KTE23]
gi|432895486|ref|ZP_20107206.1| lipoprotein yfgL [Escherichia coli KTE165]
gi|432899589|ref|ZP_20110178.1| lipoprotein yfgL [Escherichia coli KTE192]
gi|432920491|ref|ZP_20124126.1| lipoprotein yfgL [Escherichia coli KTE173]
gi|432928088|ref|ZP_20129341.1| lipoprotein yfgL [Escherichia coli KTE175]
gi|432981891|ref|ZP_20170666.1| lipoprotein yfgL [Escherichia coli KTE211]
gi|432991619|ref|ZP_20180283.1| lipoprotein yfgL [Escherichia coli KTE217]
gi|433014794|ref|ZP_20203136.1| lipoprotein yfgL [Escherichia coli KTE104]
gi|433024366|ref|ZP_20212347.1| lipoprotein yfgL [Escherichia coli KTE106]
gi|433029450|ref|ZP_20217306.1| lipoprotein yfgL [Escherichia coli KTE109]
gi|433078692|ref|ZP_20265220.1| lipoprotein yfgL [Escherichia coli KTE131]
gi|433097333|ref|ZP_20283516.1| lipoprotein yfgL [Escherichia coli KTE139]
gi|433106777|ref|ZP_20292749.1| lipoprotein yfgL [Escherichia coli KTE148]
gi|433111753|ref|ZP_20297614.1| lipoprotein yfgL [Escherichia coli KTE150]
gi|433199169|ref|ZP_20383066.1| lipoprotein yfgL [Escherichia coli KTE94]
gi|433322942|ref|ZP_20400331.1| outer membrane biogenesis protein BamB [Escherichia coli J96]
gi|110344269|gb|ABG70506.1| hypothetical protein YfgL [Escherichia coli 536]
gi|190907092|gb|EDV66692.1| outer membrane assembly lipoprotein YfgL [Escherichia coli F11]
gi|215265934|emb|CAS10343.1| protein assembly complex, lipoprotein component [Escherichia coli
O127:H6 str. E2348/69]
gi|281179566|dbj|BAI55896.1| putative dehydrogenase [Escherichia coli SE15]
gi|300304047|gb|EFJ58567.1| outer membrane assembly lipoprotein YfgL [Escherichia coli MS
200-1]
gi|312289848|gb|EFR17736.1| outer membrane assembly lipoprotein YfgL [Escherichia coli 2362-75]
gi|315300481|gb|EFU59710.1| outer membrane assembly lipoprotein YfgL [Escherichia coli MS 16-3]
gi|320196349|gb|EFW70973.1| outer membrane protein assembly complex subunit YfgL [Escherichia
coli WV_060327]
gi|323188370|gb|EFZ73662.1| outer membrane assembly lipoprotein YfgL [Escherichia coli RN587/1]
gi|324011231|gb|EGB80450.1| outer membrane assembly lipoprotein YfgL [Escherichia coli MS 60-1]
gi|330912287|gb|EGH40797.1| outer membrane protein YfgL [Escherichia coli AA86]
gi|331043069|gb|EGI15209.1| outer membrane assembly lipoprotein YfgL [Escherichia coli M605]
gi|333970620|gb|AEG37425.1| putative outer membrane protein [Escherichia coli NA114]
gi|377843589|gb|EHU08629.1| outer membrane assembly lipoprotein YfgL [Escherichia coli DEC1A]
gi|377844267|gb|EHU09304.1| outer membrane assembly lipoprotein YfgL [Escherichia coli DEC1C]
gi|377846669|gb|EHU11676.1| outer membrane assembly lipoprotein YfgL [Escherichia coli DEC1B]
gi|377856391|gb|EHU21251.1| outer membrane assembly lipoprotein YfgL [Escherichia coli DEC1D]
gi|377859444|gb|EHU24275.1| outer membrane assembly lipoprotein YfgL [Escherichia coli DEC1E]
gi|377863725|gb|EHU28530.1| outer membrane assembly lipoprotein YfgL [Escherichia coli DEC2A]
gi|377873343|gb|EHU37980.1| outer membrane assembly lipoprotein YfgL [Escherichia coli DEC2B]
gi|377876978|gb|EHU41576.1| outer membrane assembly lipoprotein YfgL [Escherichia coli DEC2C]
gi|377879542|gb|EHU44114.1| outer membrane assembly lipoprotein YfgL [Escherichia coli DEC2D]
gi|377890704|gb|EHU55161.1| outer membrane assembly lipoprotein YfgL [Escherichia coli DEC2E]
gi|386246658|gb|EII88388.1| outer membrane assembly lipoprotein YfgL [Escherichia coli 3003]
gi|388385710|gb|EIL47381.1| outer membrane protein assembly complex subunit YfgL [Escherichia
coli KD1]
gi|408200622|gb|EKI25799.1| outer membrane assembly lipoprotein YfgL [Escherichia coli
ARS4.2123]
gi|408212759|gb|EKI37272.1| outer membrane assembly lipoprotein YfgL [Escherichia coli 07798]
gi|430914716|gb|ELC35811.1| lipoprotein yfgL [Escherichia coli KTE25]
gi|430929067|gb|ELC49588.1| lipoprotein yfgL [Escherichia coli KTE28]
gi|430943600|gb|ELC63707.1| lipoprotein yfgL [Escherichia coli KTE178]
gi|430966432|gb|ELC83840.1| lipoprotein yfgL [Escherichia coli KTE189]
gi|430973357|gb|ELC90325.1| lipoprotein yfgL [Escherichia coli KTE191]
gi|430997581|gb|ELD13842.1| lipoprotein yfgL [Escherichia coli KTE206]
gi|431028581|gb|ELD41625.1| lipoprotein yfgL [Escherichia coli KTE216]
gi|431083224|gb|ELD89531.1| lipoprotein yfgL [Escherichia coli KTE47]
gi|431090947|gb|ELD96698.1| lipoprotein yfgL [Escherichia coli KTE49]
gi|431233419|gb|ELF29010.1| lipoprotein yfgL [Escherichia coli KTE162]
gi|431248484|gb|ELF42678.1| lipoprotein yfgL [Escherichia coli KTE6]
gi|431256102|gb|ELF49179.1| lipoprotein yfgL [Escherichia coli KTE8]
gi|431264580|gb|ELF56285.1| lipoprotein yfgL [Escherichia coli KTE17]
gi|431273121|gb|ELF64219.1| lipoprotein yfgL [Escherichia coli KTE18]
gi|431283944|gb|ELF74803.1| lipoprotein yfgL [Escherichia coli KTE23]
gi|431421853|gb|ELH04065.1| lipoprotein yfgL [Escherichia coli KTE165]
gi|431425718|gb|ELH07786.1| lipoprotein yfgL [Escherichia coli KTE192]
gi|431441693|gb|ELH22801.1| lipoprotein yfgL [Escherichia coli KTE173]
gi|431443053|gb|ELH24131.1| lipoprotein yfgL [Escherichia coli KTE175]
gi|431491200|gb|ELH70807.1| lipoprotein yfgL [Escherichia coli KTE211]
gi|431495701|gb|ELH75287.1| lipoprotein yfgL [Escherichia coli KTE217]
gi|431529780|gb|ELI06475.1| lipoprotein yfgL [Escherichia coli KTE104]
gi|431534427|gb|ELI10910.1| lipoprotein yfgL [Escherichia coli KTE106]
gi|431542502|gb|ELI17669.1| lipoprotein yfgL [Escherichia coli KTE109]
gi|431595816|gb|ELI65803.1| lipoprotein yfgL [Escherichia coli KTE131]
gi|431614914|gb|ELI84048.1| lipoprotein yfgL [Escherichia coli KTE139]
gi|431626485|gb|ELI95034.1| lipoprotein yfgL [Escherichia coli KTE148]
gi|431627496|gb|ELI95898.1| lipoprotein yfgL [Escherichia coli KTE150]
gi|431720554|gb|ELJ84581.1| lipoprotein yfgL [Escherichia coli KTE94]
gi|432348515|gb|ELL42965.1| outer membrane biogenesis protein BamB [Escherichia coli J96]
Length = 392
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 94/226 (41%), Gaps = 24/226 (10%)
Query: 44 PAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG--------------LSGTGIVV 89
PA+A+ VVY G + A+NA +G IW NL++ G +SG + +
Sbjct: 65 PALADNVVYAADRAGLVKALNADDGKEIWSVNLAEKDGWFSKDPALLSGGVTVSGGHVYI 124
Query: 90 NVTVAVVVAVSRSNGELVWSTQIDPRPRSQ-ITMSGSVYMGAFYVGLSSLEEALPADQCC 148
A V A++ S+G + W T++ S+ + G V + L +L EA A +
Sbjct: 125 GTEKAQVYALNTSDGTVAWQTKVAGEALSRPVVSDGLVLIHTSNGQLQALNEADGAVK-W 183
Query: 149 TFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYS------GAAVWGS--SPAIDVIRRQK 200
T + L +R + GG G S G +W S A +
Sbjct: 184 TVNLDMPSLSLRGESAPATAFGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDR 243
Query: 201 QNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIF 246
++ T P + + + Y ++ ALD+ SG+I W + LG + F
Sbjct: 244 LSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQIMWKRELGSVNDF 289
Score = 42.0 bits (97), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 63/157 (40%), Gaps = 34/157 (21%)
Query: 32 WSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLS----KLTGLSGTGI 87
W + + P V++G+V + NG L A+N +GA+ W NL L G S
Sbjct: 143 WQTKVAGEALSRPVVSDGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPAT 202
Query: 88 VVNVTVA-----VVVAVSRSNGELVW---------STQIDPRPRSQITMSGSVYMGAFYV 133
V V AV G+++W ST+ID S + + V G +
Sbjct: 203 AFGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEID--RLSDVDTTPVVVNGVVF- 259
Query: 134 GLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYM 170
+ G+L LD+R+G+I+W+ +
Sbjct: 260 -------------ALAYNGNLTALDLRSGQIMWKREL 283
Score = 38.9 bits (89), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 61/131 (46%), Gaps = 19/131 (14%)
Query: 39 DISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG--LSGTGIVVNVTVAVV 96
D+ TP V NGVV+ ++NG L A++ +G ++W++ L + + G I + V
Sbjct: 246 DVDTTPVVVNGVVFALAYNGNLTALDLRSGQIMWKRELGSVNDFIVDGNRIYLVDQNDRV 305
Query: 97 VAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAK 156
+A++ G +W TQ D R + S +Y G VG S G L
Sbjct: 306 MALTIDGGVTLW-TQSDLLHR--LLTSPVLYNGNLVVGDS--------------EGYLHW 348
Query: 157 LDVRNGRIIWQ 167
++V +GR + Q
Sbjct: 349 INVEDGRFVAQ 359
>gi|448357846|ref|ZP_21546541.1| pyrrolo-quinoline quinone [Natrialba chahannaoensis JCM 10990]
gi|445648154|gb|ELZ01116.1| pyrrolo-quinoline quinone [Natrialba chahannaoensis JCM 10990]
Length = 307
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 57/112 (50%), Gaps = 4/112 (3%)
Query: 32 WSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKL--TGLSGTGIV- 88
WSF ++TP VA+G VY S +G LYAV+A +G W + L + S GIV
Sbjct: 195 WSFETNGGTNSTPTVADGTVYVGSGDGNLYAVDASDGTEEWTFDTDGLVFSPSSADGIVY 254
Query: 89 VNVTVAVVVAVSRSNGELVWSTQIDPRPRSQITMSGS-VYMGAFYVGLSSLE 139
V + + AV ++G WS Q D S T+S V +G+F L +LE
Sbjct: 255 VGSADSSLYAVDAADGSERWSYQTDDEVGSTPTISDELVVVGSFDGTLHALE 306
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 60/106 (56%), Gaps = 8/106 (7%)
Query: 31 RWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIW----EQNL-SKLTGLSGT 85
W+F G + +PAV NG VY S + LYA+NA +G W E ++ S T + GT
Sbjct: 115 EWAFETGDSVQTSPAVDNGTVYVGSRDESLYALNAADGTEEWAFETESSIVSDPTVVDGT 174
Query: 86 GIVVNVTVAVVVAVSRSNGELVWSTQIDPRPRSQITMS-GSVYMGA 130
VVN + V+ AV ++GE +WS + + S T++ G+VY+G+
Sbjct: 175 IYVVN-SDGVLSAVD-THGEELWSFETNGGTNSTPTVADGTVYVGS 218
>gi|339022248|ref|ZP_08646206.1| alcohol dehydrogenase large subunit [Acetobacter tropicalis NBRC
101654]
gi|338750739|dbj|GAA09510.1| alcohol dehydrogenase large subunit [Acetobacter tropicalis NBRC
101654]
Length = 715
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 78/358 (21%), Positives = 122/358 (34%), Gaps = 78/358 (21%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWS--FYAGKDISATPAVANGVVYFPSWNG 58
W HG N RY+ IN T+ L+L WS F + TP V NG++Y +
Sbjct: 34 WPTHGRTYNEHRYSPLN-QINTETIGRLKLAWSSNFDTNRGQEGTPLVVNGILYATTNWS 92
Query: 59 YLYAVNAFNGALIW--EQNLSKLTGLSGTGIVVNVTVAV-------------VVAVSRSN 103
+ A + +G L+W + + + + G VN A ++A+
Sbjct: 93 KVRAYDGASGKLLWSYDPQVPGPSAVRGCCDTVNRGAAYWNGKIFVGTFDNRLIALDAKT 152
Query: 104 GELVWSTQIDPRP------RSQITMSG-SVYMGAFYVGLSSLEEALPADQCCTFRGSLAK 156
G +W P+ RS IT V G +G E RG ++
Sbjct: 153 GHKIWEVDTIPKDAWLGDIRSYITDGAPRVAKGVVMIGNGGAEFGA--------RGFVSG 204
Query: 157 LDVRNGRIIWQTYMLPDNG--------------------GKRGGY----SGAAVWGS--- 189
D G + W+ Y P+ G G + G VW S
Sbjct: 205 FDAETGALKWRFYTTPNRSNQPDHAASDAPLMTMAYRTWGPHGAWIHSGGGGTVWDSIVY 264
Query: 190 SPAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFT 249
P D++ N I +++ SIVA+ ++G W F T
Sbjct: 265 DPQTDLVYLGVGNGSPWNYKQRSDGIGDNLFLGSIVAIRPETGEYVWH--------FQET 316
Query: 250 CLVPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
P D + M + NG+ R V++ K+GF + D +G+ I
Sbjct: 317 ----------PQDQWDYTSTQHIMTADLEINGKKRHVLLHAPKNGFFYIIDAQTGEFI 364
>gi|309792309|ref|ZP_07686779.1| protein kinase [Oscillochloris trichoides DG-6]
gi|308225624|gb|EFO79382.1| protein kinase [Oscillochloris trichoides DG6]
Length = 693
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 56/120 (46%), Gaps = 5/120 (4%)
Query: 25 VRNLRLRWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQN----LSKLT 80
+R LRW+F GK I ++P + VVY S + ++YAV+A GA IW+ +
Sbjct: 453 MRRGSLRWTFRTGKPIRSSPRIDERVVYIGSDDQHIYAVDAVRGAPIWKYRTWNPIRSSA 512
Query: 81 GLSGTGIVVNVTVAVVVAVSRSNGELVWSTQI-DPRPRSQITMSGSVYMGAFYVGLSSLE 139
++ I + V + NG L W + P S + G V++G+ L +L+
Sbjct: 513 AITSQVIFIGGDDGHVYCLDVRNGALKWKQRTQQPVRSSPVFHEGLVFVGSLDQSLYALD 572
Score = 44.7 bits (104), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 32/51 (62%)
Query: 23 VTVRNLRLRWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWE 73
+ +N RL W F G I+++P V +G VYF + +G +Y ++A G LIW+
Sbjct: 611 LEAKNGRLAWKFEVGSQITSSPRVESGRVYFGAVDGNVYCLDAGVGTLIWK 661
>gi|354724668|ref|ZP_09038883.1| outer membrane biogenesis protein BamB [Enterobacter mori LMG
25706]
Length = 392
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 94/237 (39%), Gaps = 46/237 (19%)
Query: 44 PAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG--------------LSGTGIVV 89
PA A+ VVY G + AVNA +G +W NL++ G ++G + V
Sbjct: 65 PAYADSVVYAADRKGTVKAVNADDGKEVWSVNLAEKDGWFSRKPALLSGGLTVAGGHVYV 124
Query: 90 NVTVAVVVAVSRSNGELVWSTQIDPRPRSQITMS-GSVYMGAFYVGLSSLEEA------- 141
A V A++ S+G + W T + S+ +S G V + L +L EA
Sbjct: 125 GSEKAQVYALNTSDGSVAWQTTVAGESLSRPVVSDGLVLIHTSNGQLQALNEADGLVKWT 184
Query: 142 ----LPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYS------GAAVWGS-- 189
+PA + RG A I+ GG G S G +W
Sbjct: 185 VNLDMPA---LSLRGESAPATAFGAAIV---------GGDNGRVSAVLMQQGQMIWQQRI 232
Query: 190 SPAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIF 246
S A + ++ T P D + + Y ++ ALD+ SG+I W + LG + F
Sbjct: 233 SQATGSTEIDRLSDVDTTPVIVDGVVYTLAYNGNLTALDLRSGQIMWKRELGSVNDF 289
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 62/131 (47%), Gaps = 19/131 (14%)
Query: 39 DISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG--LSGTGIVVNVTVAVV 96
D+ TP + +GVVY ++NG L A++ +G ++W++ L + + G I + +
Sbjct: 246 DVDTTPVIVDGVVYTLAYNGNLTALDLRSGQIMWKRELGSVNDFIVDGNRIYMVDQNDRL 305
Query: 97 VAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAK 156
+A+S G +W TQ D R + + ++Y G+ VG S G +
Sbjct: 306 LALSTEGGVTLW-TQSDLLHR--LLTAPALYNGSLVVGDS--------------EGYMHW 348
Query: 157 LDVRNGRIIWQ 167
+D NGR + Q
Sbjct: 349 IDPENGRFVAQ 359
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 64/153 (41%), Gaps = 35/153 (22%)
Query: 36 AGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLS----KLTGLSGTGIVVNV 91
AG+ +S P V++G+V + NG L A+N +G + W NL L G S
Sbjct: 148 AGESLS-RPVVSDGLVLIHTSNGQLQALNEADGLVKWTVNLDMPALSLRGESAPATAFGA 206
Query: 92 TVA-----VVVAVSRSNGELVW---------STQIDPRPRSQITMSGSVYMGAFYVGLSS 137
+ V AV G+++W ST+ID S + + + G Y
Sbjct: 207 AIVGGDNGRVSAVLMQQGQMIWQQRISQATGSTEID--RLSDVDTTPVIVDGVVY----- 259
Query: 138 LEEALPADQCCTFRGSLAKLDVRNGRIIWQTYM 170
+ G+L LD+R+G+I+W+ +
Sbjct: 260 ---------TLAYNGNLTALDLRSGQIMWKREL 283
>gi|157374574|ref|YP_001473174.1| outer membrane protein assembly complex subunit YfgL [Shewanella
sediminis HAW-EB3]
gi|157316948|gb|ABV36046.1| pyrrolo-quinoline quinone [Shewanella sediminis HAW-EB3]
Length = 395
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 65/146 (44%), Gaps = 20/146 (13%)
Query: 32 WSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIW--EQNLSKLTGLSGT---- 85
WS AG ++ + P+V +V + +G L A N +G W E L LT L GT
Sbjct: 145 WSVIAGGELLSAPSVGEDLVVVNTSSGTLEAFNVDDGEKQWAYESKLPNLT-LRGTGSAS 203
Query: 86 ----GIVVNVTVAVVVAVSRSNGELVWSTQI-DPRPRSQITMSGSVYMGAFYVGLSSLEE 140
G V + V ++NG+ W I P+ ++ T + M +G E
Sbjct: 204 YESGGFFVGTADGKIAVVIKNNGQAAWEQAIYTPKGGNEFTRMADIDMKPLIIG-----E 258
Query: 141 ALPADQCCTFRGSLAKLDVRNGRIIW 166
L A +F G+L ++VR GR++W
Sbjct: 259 NLYA---VSFNGNLVSMEVRTGRVVW 281
>gi|298251340|ref|ZP_06975143.1| Pyrrolo-quinoline quinone [Ktedonobacter racemifer DSM 44963]
gi|297545932|gb|EFH79800.1| Pyrrolo-quinoline quinone [Ktedonobacter racemifer DSM 44963]
Length = 659
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 60/143 (41%), Gaps = 24/143 (16%)
Query: 31 RWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIW------EQNLSKLTGLSG 84
RW+F G I ++PA ANG+VYF S + +YA+ G + W E S L +
Sbjct: 332 RWTFTTGNAIESSPATANGMVYFGSTDHNVYALKGEAGEVQWSIETGEEIFSSPLANSTR 391
Query: 85 TGIVVNVTVAVVVAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPA 144
I + + A++ S G ++W D I S + G YVG A
Sbjct: 392 EVIYIGSNDFTLYALAASTGAILW----DFLTAGHIISSPGEWSGMVYVG--------SA 439
Query: 145 DQCCTFRGSLAKLDVRNGRIIWQ 167
D C + LDV G IWQ
Sbjct: 440 DHC------VYALDVETGEEIWQ 456
Score = 38.1 bits (87), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 26/43 (60%)
Query: 31 RWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWE 73
RW F G + ++P VAN +VY S + +LYA +A +G W+
Sbjct: 534 RWEFETGNIVDSSPTVANDIVYVGSHDHHLYAFDAPSGKKRWQ 576
>gi|217979505|ref|YP_002363652.1| PQQ-dependent dehydrogenase [Methylocella silvestris BL2]
gi|217504881|gb|ACK52290.1| PQQ-dependent dehydrogenase, methanol/ethanol family [Methylocella
silvestris BL2]
Length = 601
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 79/360 (21%), Positives = 140/360 (38%), Gaps = 87/360 (24%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAGKD--ISATPAVANGVVYFPS-WN 57
W D+ + RY+ + IN R+L++ +SF G D A P V +Y + +
Sbjct: 45 WTMPAKDVASTRYSSLD-QINAGNARDLKVAFSFSLGTDRGAEAAPLVVGDTMYVVTPYP 103
Query: 58 GYLYAVN-AFNGALIWEQNLSKLTGLSGTG---------------IVVNVTVAVVVAVSR 101
L+A++ +GAL W + G ++ N +AV
Sbjct: 104 NTLFALDLKQSGALKWRYDPLPSAASQGEACCDVVNRGAVFADGKLIYNTLDDYTIAVDA 163
Query: 102 SNGELVWSTQI-DPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVR 160
++G+ VW T++ D +TM+ + VG S E + RG A LDV+
Sbjct: 164 ASGKEVWRTKMGDINMGETMTMAPLLMKDKVLVGDSGGEMGV--------RGWGAALDVK 215
Query: 161 NGRIIWQTYML-PD---------------NGGKRGGYS----------GAAVWG---SSP 191
G+I+W+ Y PD + GK G + G +VWG P
Sbjct: 216 TGKIVWRAYSTGPDSDVLIGAAFKPFYDSDKGKDLGVTTWPADMWRQGGGSVWGWASYDP 275
Query: 192 AIDVIRRQKQN----NQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFY 247
++++ N N + +P + + + I A D D+G+ W +D++
Sbjct: 276 ELNLVYYGVSNPGPWNSSMRP-------GDNKWTSGIFARDADTGQARWFYQYSPHDLY- 327
Query: 248 FTCLVPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
D D +LL + G+ R V+V ++G+ + DR +G+++
Sbjct: 328 -----------------DYDGVNEEILLDMPWKGQPRKVLVHPDRNGYVYVLDRVNGEVL 370
>gi|116623623|ref|YP_825779.1| pyrrolo-quinoline quinone [Candidatus Solibacter usitatus
Ellin6076]
gi|116226785|gb|ABJ85494.1| Pyrrolo-quinoline quinone [Candidatus Solibacter usitatus
Ellin6076]
Length = 428
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 35/54 (64%), Gaps = 3/54 (5%)
Query: 20 INPVTVRNLRLRWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWE 73
++P + R L W F G I +TPA+A GVVYF S++ YAV+A +GAL W+
Sbjct: 73 VDPASGRQL---WQFTTGGPIDSTPAIAGGVVYFGSYDAKFYAVDAKSGALRWK 123
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 25/44 (56%)
Query: 30 LRWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWE 73
LRW F+ G + A+PA A G ++F SW+ YAV A G W
Sbjct: 184 LRWKFHTGDVVHASPAYAAGTLFFGSWDSRFYAVEATTGKEKWR 227
Score = 38.1 bits (87), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 34/150 (22%), Positives = 64/150 (42%), Gaps = 10/150 (6%)
Query: 30 LRWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQN----LSKLTGLSGT 85
++W F G + ++ +NG +YF S +G +YAV+ +G +W+ + ++G
Sbjct: 40 VKWKFATGGRVVSSAVASNGAIYFGSDDGNIYAVDPASGRQLWQFTTGGPIDSTPAIAGG 99
Query: 86 GIVVNVTVAVVVAVSRSNGELVW------STQIDPRPRSQITMSGSVYMGAFYVGLSSLE 139
+ A AV +G L W + + R + ++ + V LSS
Sbjct: 100 VVYFGSYDAKFYAVDAKSGALRWKFAAGSERRFEARGLHGMQPLTQTFLDPYDVFLSSPV 159
Query: 140 EALPADQCCTFRGSLAKLDVRNGRIIWQTY 169
A A + G+L LD +G + W+ +
Sbjct: 160 VAEGAVYFGSGDGNLYALDAASGALRWKFH 189
>gi|310821561|ref|YP_003953919.1| pqq enzyme repeat domain-containing protein [Stigmatella aurantiaca
DW4/3-1]
gi|309394633|gb|ADO72092.1| PQQ enzyme repeat domain protein [Stigmatella aurantiaca DW4/3-1]
Length = 384
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 65/149 (43%), Gaps = 24/149 (16%)
Query: 30 LRWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWE----QNLSKLTGLSGT 85
L WSF ++ +V +G+VY P+ +G+LYA+ G L W+ + L+ + +G
Sbjct: 95 LEWSFKTSNRFTSGASVQDGIVYVPAGDGFLYALEVRTGKLKWKYEAGEALATVPVKAGA 154
Query: 86 GIVVNVTVAVVVAVSRSNGELVWSTQIDPRPRSQITMSGS----VYMGAFYVGLSSLEEA 141
++V + AV+ + G W + D P S T+ G+ V G Y+G S
Sbjct: 155 LVLVASESDTLFAVNAATGAWAWQYRRD--PPSGFTIHGASSPLVKDGTVYLGFSD---- 208
Query: 142 LPADQCCTFRGSLAKLDVRNGRIIWQTYM 170
G L LDV G W+ +
Sbjct: 209 ----------GYLVALDVEAGTEKWEKAL 227
Score = 42.0 bits (97), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 67/144 (46%), Gaps = 18/144 (12%)
Query: 16 GEVLINPVTVRNLRLRWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQN 75
G+ + + VR +L+W + AG+ ++ P A +V S + L+AVNA GA W+
Sbjct: 121 GDGFLYALEVRTGKLKWKYEAGEALATVPVKAGALVLVASESDTLFAVNAATGAWAWQYR 180
Query: 76 LSKLTGLSGTG----IVVNVTVAV------VVAVSRSNGELVW-------STQ-IDPRPR 117
+G + G +V + TV + +VA+ G W +TQ +D
Sbjct: 181 RDPPSGFTIHGASSPLVKDGTVYLGFSDGYLVALDVEAGTEKWEKALATGATQFLDVDST 240
Query: 118 SQITMSGSVYMGAFYVGLSSLEEA 141
I +G +Y+ ++ GL +L+ A
Sbjct: 241 PAIDEAGRLYVTSYQGGLYALDAA 264
>gi|261340816|ref|ZP_05968674.1| outer membrane assembly lipoprotein YfgL [Enterobacter cancerogenus
ATCC 35316]
gi|288317242|gb|EFC56180.1| outer membrane assembly lipoprotein YfgL [Enterobacter cancerogenus
ATCC 35316]
Length = 392
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 94/237 (39%), Gaps = 46/237 (19%)
Query: 44 PAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG--------------LSGTGIVV 89
PA A+ VVY G + A+NA +G +W NL++ G ++G + V
Sbjct: 65 PAFADSVVYAADRKGTVKALNADDGKEVWSVNLAEKDGWFSRKPALLSGGLTVAGGHVYV 124
Query: 90 NVTVAVVVAVSRSNGELVWSTQIDPRPRSQITMS-GSVYMGAFYVGLSSLEEA------- 141
A V A++ S+G + W T + S+ +S G V + L +L EA
Sbjct: 125 GSEKAQVYALNASDGSIAWQTTVAGESLSRPVVSDGMVLIHTSNGQLQALNEADGLVKWT 184
Query: 142 ----LPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYS------GAAVWGS-- 189
+PA + RG A I+ GG G S G +W
Sbjct: 185 VNLDMPA---LSLRGESAPATAFGAAIV---------GGDNGRVSAVLMQEGQMIWQQRI 232
Query: 190 SPAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIF 246
S A + ++ T P D + + Y ++ ALD+ SG+I W + LG + F
Sbjct: 233 SQATGSTEIDRLSDVDTTPVIVDGVVYALAYNGNLTALDLRSGQIMWKRELGSVNDF 289
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 64/153 (41%), Gaps = 35/153 (22%)
Query: 36 AGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLS----KLTGLSGTGIVVNV 91
AG+ +S P V++G+V + NG L A+N +G + W NL L G S
Sbjct: 148 AGESLS-RPVVSDGMVLIHTSNGQLQALNEADGLVKWTVNLDMPALSLRGESAPATAFGA 206
Query: 92 TVA-----VVVAVSRSNGELVW---------STQIDPRPRSQITMSGSVYMGAFYVGLSS 137
+ V AV G+++W ST+ID S + + + G Y
Sbjct: 207 AIVGGDNGRVSAVLMQEGQMIWQQRISQATGSTEID--RLSDVDTTPVIVDGVVY----- 259
Query: 138 LEEALPADQCCTFRGSLAKLDVRNGRIIWQTYM 170
+ G+L LD+R+G+I+W+ +
Sbjct: 260 ---------ALAYNGNLTALDLRSGQIMWKREL 283
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 61/131 (46%), Gaps = 19/131 (14%)
Query: 39 DISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG--LSGTGIVVNVTVAVV 96
D+ TP + +GVVY ++NG L A++ +G ++W++ L + + G I + +
Sbjct: 246 DVDTTPVIVDGVVYALAYNGNLTALDLRSGQIMWKRELGSVNDFIVDGNRIYMVDQNDRL 305
Query: 97 VAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAK 156
+A+S G +W TQ D R + + ++Y G+ VG S G L
Sbjct: 306 LALSTEGGVTLW-TQSDLLHR--LLTAPALYNGSLVVGDS--------------EGYLHW 348
Query: 157 LDVRNGRIIWQ 167
+D NGR Q
Sbjct: 349 IDPENGRFTAQ 359
>gi|161502326|ref|YP_001569438.1| outer membrane protein assembly complex subunit YfgL [Salmonella
enterica subsp. arizonae serovar 62:z4,z23:- str.
RSK2980]
gi|160863673|gb|ABX20296.1| hypothetical protein SARI_00359 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:-]
Length = 392
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 94/243 (38%), Gaps = 58/243 (23%)
Query: 44 PAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG--------------LSGTGIVV 89
P +A+ VVY S G + A+NA +G IW NL + G ++G + +
Sbjct: 65 PVMADNVVYAASRAGVVKALNADDGKEIWSVNLGEKDGWFSRSSALLSGGVTVAGGHVYI 124
Query: 90 NVTVAVVVAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCT 149
A+V A++ S+G W T++ S+ +S + + T
Sbjct: 125 GSEKALVYALNTSDGTTEWQTKVAGEALSRPVVSDGLVL------------------IHT 166
Query: 150 FRGSLAKLDVRNGRIIWQTYMLPDNGGKRG------GYSGAAVWGSSPAIDVIRR----- 198
G L L+ +G I W + + RG + A V G + + +
Sbjct: 167 SNGQLQALNQADGAIKWTVSLDMPSLSLRGESAPATAFGAAIVGGDNGRVSAVLMQQGQM 226
Query: 199 --QKQNNQTTKPTHPDQCISSDI-------------YANSIVALDIDSGRIAWAKPLGGY 243
Q++ +Q T PT D+ D Y ++ ALD+ SG+I W + LG
Sbjct: 227 IWQQRISQATGPTEIDRLSDVDTTPVVVNGVVYALAYNGNLTALDLRSGQIMWKRELGSV 286
Query: 244 DIF 246
+ F
Sbjct: 287 NDF 289
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 64/139 (46%), Gaps = 13/139 (9%)
Query: 39 DISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG--LSGTGIVVNVTVAVV 96
D+ TP V NGVVY ++NG L A++ +G ++W++ L + + G I + V
Sbjct: 246 DVDTTPVVVNGVVYALAYNGNLTALDLRSGQIMWKRELGSVNDFIVDGDRIYLVDQNDRV 305
Query: 97 VAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSS--------LEEALPADQCC 148
+A++ G +W TQ D R + S +Y G VG S + A Q
Sbjct: 306 LALTTDGGVTLW-TQSDLLHR--LLTSPVLYNGDLVVGDSEGYLHWINVDDGRFVAQQKV 362
Query: 149 TFRGSLAKLDVRNGRIIWQ 167
G L + V +G+++ Q
Sbjct: 363 DSSGFLTEPTVADGKLLIQ 381
>gi|295698891|ref|YP_003606784.1| PQQ-dependent dehydrogenase [Burkholderia sp. CCGE1002]
gi|295438104|gb|ADG17273.1| PQQ-dependent dehydrogenase, methanol/ethanol family [Burkholderia
sp. CCGE1002]
Length = 605
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 79/359 (22%), Positives = 135/359 (37%), Gaps = 82/359 (22%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAG--KDISATPAVANGVVYFPS-WN 57
W GD N RY+ + IN V L++ W+ G + P V +Y S +
Sbjct: 39 WAAQAGDYANHRYSPLK-QINENNVGKLQVAWTMSTGVLRGHEGAPLVIGDTMYIHSPFP 97
Query: 58 GYLYAVNAFNGALIW-------EQNLSKLT------GLS-GTG-IVVNVTVAVVVAVSRS 102
+ AVN + +W EQ +S + GL+ G G I + +VA++
Sbjct: 98 NKVIAVNLKDQTFLWQYQPKQDEQVVSVMCCDTVNRGLAYGDGKIFLQQADTKLVALNAK 157
Query: 103 NGELVWSTQI-DPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRN 161
GE+VW+ Q +P+ T + V+ G+S E + RG L D++
Sbjct: 158 TGEVVWTAQNGNPKAGETNTNAPHVFGDKVLTGISGGEFGV--------RGRLIAYDIKT 209
Query: 162 GRIIWQTYML-PDN-----------------------------GGKRGGYSGAAVWGS-- 189
G+ +W Y PDN G + G WG
Sbjct: 210 GKQVWTAYSTGPDNEMLLDPQKTMTYSNGQMVPVGADSSVKSWKGDQWKLGGGTTWGWYA 269
Query: 190 -SPAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYF 248
P ++++ N T PT Q + ++ SI A D+++G W ++
Sbjct: 270 WDPKLNLVYYGTGNPGTWNPT---QRPGDNKWSMSIFARDLNTGTAKW--------VYQM 318
Query: 249 TCLVPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
T P D D +L ++ NG+ +V ++GF + +R++G ++
Sbjct: 319 T----------PHDEWDYDGVNEMILSDLTINGKKVPAIVHFDRNGFGYTLNRETGQLL 367
>gi|387126746|ref|YP_006295351.1| methanol dehydrogenase large subunit protein [Methylophaga sp.
JAM1]
gi|386273808|gb|AFI83706.1| Methanol dehydrogenase large subunit protein [Methylophaga sp.
JAM1]
Length = 592
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 79/360 (21%), Positives = 139/360 (38%), Gaps = 87/360 (24%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAG--KDISATPAVANGVVY----FP 54
W+ GD N RY+ I V +L + WSF G + V +G +Y FP
Sbjct: 34 WVMPAGDYANTRYSE-LTQITKDNVNDLNMAWSFSTGVLRGHEGNALVMDGTMYVHTPFP 92
Query: 55 SWNGYLYAVNAFN-GALIWE----QNLSKLT----------GLS-GTG-IVVNVTVAVVV 97
+ ++A++ N GA+ W+ QN + GLS G G I +N +V
Sbjct: 93 N---IVFALDLNNDGAIKWKYEPKQNYDETVPVMCCDTVNRGLSYGDGKIFLNQADTTLV 149
Query: 98 AVSRSNGELVWSTQ-IDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAK 156
A+ GE+VWS + DP+ + T + V+ VG+S E + RG +
Sbjct: 150 ALDMETGEVVWSDKRDDPKVGATSTAAAHVFDDKIIVGISGGEFGV--------RGYVQA 201
Query: 157 LDVRNGRIIWQTYML-PDN-------------------------GGKRGGYSGAAVWG-- 188
D+ +G +++ Y + PD+ G + G WG
Sbjct: 202 YDL-DGNTVYKAYSVGPDDEMLVDPDKTMSMLKPVGKDSSLKSWQGDQWKIGGGTTWGWY 260
Query: 189 -SSPAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFY 247
P ++ N T P Q + + ++ D+D+G W + YD +
Sbjct: 261 SYDPDLNQFYYGSGNPSTWNPV---QRPGDNKWTMTLFGRDLDTGMAKWVYQMTPYDEWD 317
Query: 248 FTCLVPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
+ + N +L+ G+ R ++V ++GF + DR++G+++
Sbjct: 318 YDGINEN------------------VLVDQKIKGKMRKMLVHFDRNGFGYTMDRETGELL 359
>gi|254491432|ref|ZP_05104611.1| PQQ-dependent dehydrogenase, methanol/ethanol family [Methylophaga
thiooxidans DMS010]
gi|224462910|gb|EEF79180.1| PQQ-dependent dehydrogenase, methanol/ethanol family [Methylophaga
thiooxydans DMS010]
Length = 592
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 80/360 (22%), Positives = 138/360 (38%), Gaps = 87/360 (24%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAG--KDISATPAVANGVVY----FP 54
W+ G+ N RY+ IN V++L + WSF G + V +G +Y FP
Sbjct: 34 WVMPAGNYANHRYSE-LTQINKDNVKDLNMAWSFSTGVLRGHEGNALVMDGTMYVHTAFP 92
Query: 55 SWNGYLYAVNAFN-GALIWE----QNLSKLT----------GLS-GTG-IVVNVTVAVVV 97
+ ++A++ N GA+ W+ QN + GLS G G I +N +V
Sbjct: 93 N---IVFALDLNNDGAIKWKYEPKQNYDETVPVMCCDTVNRGLSYGDGKIFLNQADTTLV 149
Query: 98 AVSRSNGELVWSTQID-PRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAK 156
A++ ++G +VWS + D P+ + T + V+ VG+S E + RG +
Sbjct: 150 ALNATDGSVVWSDKRDDPKRGATSTAAAHVFKDKVLVGISGGEFGV--------RGYIQA 201
Query: 157 LDVRNGRIIWQTY-------MLPDNG-------------------GKRGGYSGAAVWG-- 188
D+ +G +++ Y ML D G + G WG
Sbjct: 202 YDL-DGNTLYKAYSTGPDEEMLIDPAKTTSMLKPVGKDSSLKTWQGDQWKIGGGTTWGWY 260
Query: 189 -SSPAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFY 247
P +D+ N T P Q + + S+ D+D+G W + +D +
Sbjct: 261 SYDPDLDMFYYGNGNPSTWNPV---QRPGDNKWTMSLFGRDLDTGMAKWVYQMTPFDEW- 316
Query: 248 FTCLVPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
D D +L G+ V ++GF + DR++G+++
Sbjct: 317 -----------------DYDGVNEVILAEQKVRGKMHKTAVHFDRNGFGYTMDRETGELL 359
>gi|115377689|ref|ZP_01464882.1| serine/threonine protein kinase related protein, putative
[Stigmatella aurantiaca DW4/3-1]
gi|115365295|gb|EAU64337.1| serine/threonine protein kinase related protein, putative
[Stigmatella aurantiaca DW4/3-1]
Length = 369
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 65/149 (43%), Gaps = 24/149 (16%)
Query: 30 LRWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWE----QNLSKLTGLSGT 85
L WSF ++ +V +G+VY P+ +G+LYA+ G L W+ + L+ + +G
Sbjct: 80 LEWSFKTSNRFTSGASVQDGIVYVPAGDGFLYALEVRTGKLKWKYEAGEALATVPVKAGA 139
Query: 86 GIVVNVTVAVVVAVSRSNGELVWSTQIDPRPRSQITMSGS----VYMGAFYVGLSSLEEA 141
++V + AV+ + G W + D P S T+ G+ V G Y+G S
Sbjct: 140 LVLVASESDTLFAVNAATGAWAWQYRRD--PPSGFTIHGASSPLVKDGTVYLGFSD---- 193
Query: 142 LPADQCCTFRGSLAKLDVRNGRIIWQTYM 170
G L LDV G W+ +
Sbjct: 194 ----------GYLVALDVEAGTEKWEKAL 212
Score = 41.6 bits (96), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 67/144 (46%), Gaps = 18/144 (12%)
Query: 16 GEVLINPVTVRNLRLRWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQN 75
G+ + + VR +L+W + AG+ ++ P A +V S + L+AVNA GA W+
Sbjct: 106 GDGFLYALEVRTGKLKWKYEAGEALATVPVKAGALVLVASESDTLFAVNAATGAWAWQYR 165
Query: 76 LSKLTGLSGTG----IVVNVTVAV------VVAVSRSNGELVW-------STQ-IDPRPR 117
+G + G +V + TV + +VA+ G W +TQ +D
Sbjct: 166 RDPPSGFTIHGASSPLVKDGTVYLGFSDGYLVALDVEAGTEKWEKALATGATQFLDVDST 225
Query: 118 SQITMSGSVYMGAFYVGLSSLEEA 141
I +G +Y+ ++ GL +L+ A
Sbjct: 226 PAIDEAGRLYVTSYQGGLYALDAA 249
>gi|423141151|ref|ZP_17128789.1| outer membrane assembly lipoprotein YfgL [Salmonella enterica
subsp. houtenae str. ATCC BAA-1581]
gi|379053705|gb|EHY71596.1| outer membrane assembly lipoprotein YfgL [Salmonella enterica
subsp. houtenae str. ATCC BAA-1581]
Length = 392
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 93/243 (38%), Gaps = 58/243 (23%)
Query: 44 PAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG--------------LSGTGIVV 89
P +A+ VVY S G + A+NA +G IW NL + G ++G + +
Sbjct: 65 PVMADNVVYAASRAGVVKALNADDGKEIWSVNLGEKDGWFSRSSALLSGGVTVAGGHVYI 124
Query: 90 NVTVAVVVAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCT 149
A V A++ S+G W T++ S+ +S + + T
Sbjct: 125 GSEKAEVYALNTSDGTTAWQTKVAGEALSRPVVSDGIVL------------------IHT 166
Query: 150 FRGSLAKLDVRNGRIIWQTYMLPDNGGKRG------GYSGAAVWGSSPAIDVIRR----- 198
G L L+ +G I W + + RG + A V G + + +
Sbjct: 167 SNGQLQALNQADGAIKWTVNLDMPSLSLRGESAPATAFGAAIVGGDNGRVSAVLMQQGQM 226
Query: 199 --QKQNNQTTKPTHPDQCISSDI-------------YANSIVALDIDSGRIAWAKPLGGY 243
Q++ +Q T PT D+ D Y ++ ALD+ SG+I W + LG
Sbjct: 227 IWQQRISQATGPTEIDRLSDVDTTPVVVNGVVYALAYNGNLTALDLRSGQIMWKRELGSV 286
Query: 244 DIF 246
+ F
Sbjct: 287 NDF 289
Score = 42.7 bits (99), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 61/155 (39%), Gaps = 30/155 (19%)
Query: 32 WSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLS----KLTGLSGTGI 87
W + + P V++G+V + NG L A+N +GA+ W NL L G S
Sbjct: 143 WQTKVAGEALSRPVVSDGIVLIHTSNGQLQALNQADGAIKWTVNLDMPSLSLRGESAPAT 202
Query: 88 VVNVTVA-----VVVAVSRSNGELVWSTQI-------DPRPRSQITMSGSVYMGAFYVGL 135
+ V AV G+++W +I + S + + V G Y
Sbjct: 203 AFGAAIVGGDNGRVSAVLMQQGQMIWQQRISQATGPTEIDRLSDVDTTPVVVNGVVY--- 259
Query: 136 SSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYM 170
+ G+L LD+R+G+I+W+ +
Sbjct: 260 -----------ALAYNGNLTALDLRSGQIMWKREL 283
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 61/131 (46%), Gaps = 19/131 (14%)
Query: 39 DISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG--LSGTGIVVNVTVAVV 96
D+ TP V NGVVY ++NG L A++ +G ++W++ L + + G I + V
Sbjct: 246 DVDTTPVVVNGVVYALAYNGNLTALDLRSGQIMWKRELGSVNDFIVDGDRIYLVDQNDRV 305
Query: 97 VAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAK 156
+A++ G +W TQ D R + S +Y G VG S G L
Sbjct: 306 LALTTDGGVTLW-TQSDLLHR--LLTSPVLYNGDLVVGDS--------------EGYLHW 348
Query: 157 LDVRNGRIIWQ 167
++V +GR + Q
Sbjct: 349 INVDDGRFVAQ 359
>gi|311278557|ref|YP_003940788.1| outer membrane assembly lipoprotein YfgL [Enterobacter cloacae
SCF1]
gi|308747752|gb|ADO47504.1| outer membrane assembly lipoprotein YfgL [Enterobacter cloacae
SCF1]
Length = 392
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 93/243 (38%), Gaps = 58/243 (23%)
Query: 44 PAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG--------------LSGTGIVV 89
P A+ VVY G + A+NA +G +W NL++ G +SG + V
Sbjct: 65 PTFADSVVYAADRKGTVKALNADSGKEVWSVNLAEKDGWFSHLPALLSGGLTVSGGHVYV 124
Query: 90 NVTVAVVVAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCT 149
A V A++ S+G + W T++ S+ +S + + T
Sbjct: 125 GSEKAQVYALNTSDGSVAWQTRVAGEAVSRPVVSDGMVL------------------VHT 166
Query: 150 FRGSLAKLDVRNGRIIWQTYMLPDNGGKRG------GYSGAAVWGSSPAIDVIRR----- 198
G L L+ +G + W + + RG Y A V G + + +
Sbjct: 167 GNGQLQALNESDGAVKWTVNLDMPSLSLRGESAPAVAYGAAIVGGDNGRVSAVLMQQGQM 226
Query: 199 --QKQNNQTTKPTHPDQCISSDI-------------YANSIVALDIDSGRIAWAKPLGGY 243
Q++ +Q T PT D+ D Y ++ ALD+ SG+I W + LG
Sbjct: 227 IWQQRISQATGPTEIDRLSDVDTTPVVVNGVVYALAYNGNLTALDLRSGQIMWKRELGSV 286
Query: 244 DIF 246
+ F
Sbjct: 287 NDF 289
Score = 42.4 bits (98), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 62/155 (40%), Gaps = 30/155 (19%)
Query: 32 WSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLS----KLTGLSGTGI 87
W + + P V++G+V + NG L A+N +GA+ W NL L G S +
Sbjct: 143 WQTRVAGEAVSRPVVSDGMVLVHTGNGQLQALNESDGAVKWTVNLDMPSLSLRGESAPAV 202
Query: 88 VVNVTVA-----VVVAVSRSNGELVWSTQI-------DPRPRSQITMSGSVYMGAFYVGL 135
+ V AV G+++W +I + S + + V G Y
Sbjct: 203 AYGAAIVGGDNGRVSAVLMQQGQMIWQQRISQATGPTEIDRLSDVDTTPVVVNGVVY--- 259
Query: 136 SSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYM 170
+ G+L LD+R+G+I+W+ +
Sbjct: 260 -----------ALAYNGNLTALDLRSGQIMWKREL 283
Score = 42.0 bits (97), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 52/101 (51%), Gaps = 5/101 (4%)
Query: 39 DISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG--LSGTGIVVNVTVAVV 96
D+ TP V NGVVY ++NG L A++ +G ++W++ L + + G I + +
Sbjct: 246 DVDTTPVVVNGVVYALAYNGNLTALDLRSGQIMWKRELGSVNDFVIDGNRIYLVDQNDRI 305
Query: 97 VAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSS 137
+A+S G +W TQ D R + S +Y G+ VG S
Sbjct: 306 LALSTDGGVTLW-TQSDLLHR--LLTSPVLYNGSLVVGDSE 343
>gi|218701022|ref|YP_002408651.1| outer membrane protein assembly complex subunit YfgL [Escherichia
coli IAI39]
gi|331684160|ref|ZP_08384756.1| outer membrane assembly lipoprotein YfgL [Escherichia coli H299]
gi|386625249|ref|YP_006144977.1| lipoprotein required for OM biogenesis, in BamABCD complex
[Escherichia coli O7:K1 str. CE10]
gi|432617654|ref|ZP_19853767.1| lipoprotein yfgL [Escherichia coli KTE75]
gi|450191394|ref|ZP_21891203.1| outer membrane biogenesis protein BamB [Escherichia coli SEPT362]
gi|218371008|emb|CAR18836.1| protein assembly complex, lipoprotein component [Escherichia coli
IAI39]
gi|331079112|gb|EGI50314.1| outer membrane assembly lipoprotein YfgL [Escherichia coli H299]
gi|349738986|gb|AEQ13692.1| lipoprotein required for OM biogenesis, in BamABCD complex
[Escherichia coli O7:K1 str. CE10]
gi|431153642|gb|ELE54546.1| lipoprotein yfgL [Escherichia coli KTE75]
gi|449319541|gb|EMD09590.1| outer membrane biogenesis protein BamB [Escherichia coli SEPT362]
Length = 392
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 94/226 (41%), Gaps = 24/226 (10%)
Query: 44 PAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG--------------LSGTGIVV 89
PA+A+ VVY G + A+NA +G IW NL++ G +SG + +
Sbjct: 65 PALADNVVYAADRAGLVKALNADDGKEIWSVNLAEKDGWFSKDPALLSGGVTVSGGHVYI 124
Query: 90 NVTVAVVVAVSRSNGELVWSTQIDPRPRSQ-ITMSGSVYMGAFYVGLSSLEEALPADQCC 148
A V A++ S+G + W T++ S+ + G V + L +L EA A +
Sbjct: 125 GSEKAQVYALNTSDGTVAWQTKVAGEALSRPVVSDGLVLIHTSNGQLQALNEADGAVK-W 183
Query: 149 TFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYS------GAAVWGS--SPAIDVIRRQK 200
T + L +R + GG G S G +W S A +
Sbjct: 184 TVNLDMPSLSLRGESAPATAFGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDR 243
Query: 201 QNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIF 246
++ T P + + + Y ++ ALD+ SG+I W + LG + F
Sbjct: 244 LSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQIMWKRELGSVNDF 289
Score = 42.0 bits (97), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 63/157 (40%), Gaps = 34/157 (21%)
Query: 32 WSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLS----KLTGLSGTGI 87
W + + P V++G+V + NG L A+N +GA+ W NL L G S
Sbjct: 143 WQTKVAGEALSRPVVSDGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPAT 202
Query: 88 VVNVTVA-----VVVAVSRSNGELVW---------STQIDPRPRSQITMSGSVYMGAFYV 133
V V AV G+++W ST+ID S + + V G +
Sbjct: 203 AFGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEID--RLSDVDTTPVVVNGVVF- 259
Query: 134 GLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYM 170
+ G+L LD+R+G+I+W+ +
Sbjct: 260 -------------ALAYNGNLTALDLRSGQIMWKREL 283
Score = 39.3 bits (90), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 61/131 (46%), Gaps = 19/131 (14%)
Query: 39 DISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG--LSGTGIVVNVTVAVV 96
D+ TP V NGVV+ ++NG L A++ +G ++W++ L + + G I + V
Sbjct: 246 DVDTTPVVVNGVVFALAYNGNLTALDLRSGQIMWKRELGSVNDFIVDGNRIYLVDQNDRV 305
Query: 97 VAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAK 156
+A++ G +W TQ D R + S +Y G VG S G L
Sbjct: 306 MALTIDGGVTLW-TQSDLLHR--LLTSPVLYNGNLVVGDS--------------EGYLHW 348
Query: 157 LDVRNGRIIWQ 167
++V +GR + Q
Sbjct: 349 INVEDGRFVAQ 359
>gi|409396045|ref|ZP_11247066.1| pyrrolo-quinoline quinone [Pseudomonas sp. Chol1]
gi|409119298|gb|EKM95682.1| pyrrolo-quinoline quinone [Pseudomonas sp. Chol1]
Length = 724
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 77/192 (40%), Gaps = 27/192 (14%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFY--AGKDISATPAVANGVVYFPSWNG 58
W HG D R++ I+ V L L W F + + TP + +Y G
Sbjct: 42 WPQHGLDAAETRFSP-LAQIDRSNVSRLGLAWQFRFDRPRGVQGTPLMVGETLYVSGPWG 100
Query: 59 YLYAVNAFNGALIWEQN--LSKLTGLSGTGIVVNVTVAV-------------VVAVSRSN 103
+YA++A NG L W+ + + VVN VAV + A+ +
Sbjct: 101 VVYALDARNGELRWQHDPLVPAHKAAVACCDVVNRGVAVAHERVFVGTLDGRLQALDAHS 160
Query: 104 GELVWSTQIDPRPRS-QITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNG 162
GEL+WSTQ P R IT + V +G E + RG L+ D +G
Sbjct: 161 GELLWSTQTTPPERPYTITGAPRVVGDLVMIGNGGAEYGV--------RGYLSAYDAASG 212
Query: 163 RIIWQTYMLPDN 174
+ W+ Y +P +
Sbjct: 213 ELRWRFYTVPGD 224
>gi|392409154|ref|YP_006445761.1| WD40-like repeat protein [Desulfomonile tiedjei DSM 6799]
gi|390622290|gb|AFM23497.1| WD40-like repeat protein [Desulfomonile tiedjei DSM 6799]
Length = 425
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/223 (21%), Positives = 88/223 (39%), Gaps = 28/223 (12%)
Query: 29 RLRWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLT----GLSG 84
+L W F G I ++ ++ Y SW+ +LYA++ G L W+ + +
Sbjct: 144 QLNWKFRTGNVIRSSALISGRTAYIGSWDHHLYAIDVETGTLKWKFKAGREIWCSPAIGE 203
Query: 85 TGIVVNVTVAVVVAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPA 144
++ + ++ A+ +NG W ++D P T S +G+ +
Sbjct: 204 DRVIFLSSDGMIYALDINNGRPAWRLRVDS-PFFSWTESAPTIIGSMLM----------- 251
Query: 145 DQCCTFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYSGAAVWGSSP----AIDVI---- 196
C + RG L D+R+G I+W+ + G +G+ A+D I
Sbjct: 252 --CGSHRGILYSADIRSGGIVWEFKASGPVNSSPTFFDGLIYFGADDGNLYALDPISGTE 309
Query: 197 --RRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWA 237
R + ++P D + + S+ ALD +G I W+
Sbjct: 310 KWRSSLKRAVASRPAVADGTVFACSLDGSLHALDAQTGAIQWS 352
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 55/250 (22%), Positives = 90/250 (36%), Gaps = 60/250 (24%)
Query: 23 VTVRNLRLRWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNL------ 76
+ V L+W F AG++I +PA+ V F S +G +YA++ NG W +
Sbjct: 178 IDVETGTLKWKFKAGREIWCSPAIGEDRVIFLSSDGMIYALDINNGRPAWRLRVDSPFFS 237
Query: 77 --SKLTGLSGTGIVVNVTVAVVVAVSRSNGELVWSTQID-PRPRSQITMSGSVYMGAFYV 133
+ G+ ++ ++ + +G +VW + P S G +Y GA
Sbjct: 238 WTESAPTIIGSMLMCGSHRGILYSADIRSGGIVWEFKASGPVNSSPTFFDGLIYFGADDG 297
Query: 134 GL-------------SSLEEALPADQC--------CTFRGSLAKLDVRNGRIIWQTYMLP 172
L SSL+ A+ + C+ GSL LD + G I W
Sbjct: 298 NLYALDPISGTEKWRSSLKRAVASRPAVADGTVFACSLDGSLHALDAQTGAIQWSF---- 353
Query: 173 DNGGKRGGYSGAAVWGSSPAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSG 232
Q+ N + P D + + + I ALD +G
Sbjct: 354 --------------------------QRLRNLFSSPVVLDGRLYTGCTDHRIYALDAKTG 387
Query: 233 RIAWAKPLGG 242
+AW+ GG
Sbjct: 388 SVAWSFETGG 397
>gi|335043518|ref|ZP_08536545.1| WD40-like repeat containing protein [Methylophaga
aminisulfidivorans MP]
gi|333790132|gb|EGL56014.1| WD40-like repeat containing protein [Methylophaga
aminisulfidivorans MP]
Length = 391
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 82/367 (22%), Positives = 138/367 (37%), Gaps = 83/367 (22%)
Query: 48 NGVVYFPSWNGYLYAVNAFNGALIWEQNL--SKLTGLSG--TGIVVNVTVAVVVAVSRSN 103
N ++ G + A+NA G IW+ +L + +TG+ G + V VVVA++ ++
Sbjct: 74 NNKIFAVDHEGEVTALNAETGREIWDADLDLNVVTGIGGGMNMVYVGSDKGVVVALNEAD 133
Query: 104 GELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRN-G 162
G+ +W TQ+ + +T + V + G S A +++ ++ L +R G
Sbjct: 134 GKELWRTQLTSEVLAPVTSANDVVVSRTSDGRVSGISAQDGKVLWSYQRAVPLLSLRGAG 193
Query: 163 R--IIWQTYMLPDNGGKRGGYS---GAAVWGSSPAIDVIRRQKQN--NQTTKPTHPDQCI 215
R I + + GK S G +W +S AI R + + + P D +
Sbjct: 194 RPVITGNEVIAGYDNGKLVALSLNDGKVLWENSIAIPRGRTELERLVDIDADPVVIDDTV 253
Query: 216 SSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLL 275
Y + A+DI+SGR+ W++ +
Sbjct: 254 YVVTYQGQLAAVDINSGRVLWSRDMSS--------------------------------- 280
Query: 276 TISTNGRFRDVVVAVQKSGFAWAFDRDSGDIIWFK------------LAG----PGGREG 319
I + + D V G+ WA SGD +W + +AG G EG
Sbjct: 281 QIGLDAAYHDAVYVTDDEGYVWAVQDGSGDALWRQTRLLRRQATAPAIAGNYIIVGDFEG 340
Query: 320 GGVWGAATDGRRVYTNIVNNDRIIWSTADPSNETAHGPV----TVVNGVLFAGSVSANGS 375
W A DGR V + + GP+ V+NGV++ +A+GS
Sbjct: 341 YIHWIARDDGRFV----------------SRQQVSDGPIYCKPLVINGVVYI--TAADGS 382
Query: 376 TVYGGVP 382
VP
Sbjct: 383 ITALRVP 389
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 67/148 (45%), Gaps = 16/148 (10%)
Query: 32 WSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWE-QNLSKLTGLSGTG---I 87
W ++ A AN VV + +G + ++A +G ++W Q L L G G I
Sbjct: 138 WRTQLTSEVLAPVTSANDVVVSRTSDGRVSGISAQDGKVLWSYQRAVPLLSLRGAGRPVI 197
Query: 88 VVNVTVA-----VVVAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEAL 142
N +A +VA+S ++G+++W I PR + + V + A V +
Sbjct: 198 TGNEVIAGYDNGKLVALSLNDGKVLWENSI-AIPRGRTELERLVDIDADPVVIDDTV--- 253
Query: 143 PADQCCTFRGSLAKLDVRNGRIIWQTYM 170
T++G LA +D+ +GR++W M
Sbjct: 254 ---YVVTYQGQLAAVDINSGRVLWSRDM 278
>gi|338212277|ref|YP_004656332.1| quinoprotein glucose dehydrogenase [Runella slithyformis DSM 19594]
gi|336306098|gb|AEI49200.1| Quinoprotein glucose dehydrogenase [Runella slithyformis DSM 19594]
Length = 707
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 77/368 (20%), Positives = 133/368 (36%), Gaps = 92/368 (25%)
Query: 1 WLNHGGDLNNRRYAYGEVL-------------INPVTVRNLRLRWSFYAGK---DISATP 44
W +H D NR + E L I +NLR+ W +++G I P
Sbjct: 21 WYSHSDD-KNRYTGWSEFLGGPERTHYSSLTQITTENAKNLRVAWEYHSGDTTGQIQCNP 79
Query: 45 AVANGVVYFPSWNGYLYAVNA-----------------FN---GALIWEQNLSKLTGLSG 84
+ +GV+Y + + ++A++A FN G WE K S
Sbjct: 80 IMVDGVLYGTTASVQVFALDAATGKELWKYKDSKDPQWFNTNRGVTYWEGGDDKRIFFSA 139
Query: 85 TGIVVNVTVAVVVAVSR--SNGELVWSTQIDPRPRSQITMS---GSVYMGAFY--VGLSS 137
+ + ++ NG + + + + S G++Y V LS
Sbjct: 140 GQWLYALEAKTGTPITSFGENGRMNLRNGLPDSAKDKFICSNTPGTIYKDLIIMPVRLSE 199
Query: 138 LEEALPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYSGAAVWGSS--PAIDV 195
+A P G + +VR G++ W +P G G WG + DV
Sbjct: 200 GPDAAP--------GHVRAFNVRTGKLAWTFRTIP-----HPGEYGYETWGKNNYKNEDV 246
Query: 196 --------IRRQKQNNQTTKPT-------HPDQCISSDIYANSIVALDIDSGRIAWAKPL 240
+ ++ PT + +++AN ++ALD +G+ W
Sbjct: 247 GAANNWAGMAVDRERGILFVPTGSAGYDFYGGNRPGKNLFANCLLALDAATGKRLWHFQF 306
Query: 241 GGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFD 300
+D++ D D AP L+TI+ +G+ D V + KSGF + FD
Sbjct: 307 VHHDVW------------------DRDLPSAPTLVTINRDGKKIDAVAQITKSGFVFVFD 348
Query: 301 RDSGDIIW 308
R +G ++
Sbjct: 349 RVTGKSLF 356
>gi|117919681|ref|YP_868873.1| outer membrane protein assembly complex subunit YfgL [Shewanella
sp. ANA-3]
gi|117612013|gb|ABK47467.1| Pyrrolo-quinoline quinone [Shewanella sp. ANA-3]
Length = 395
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 76/169 (44%), Gaps = 21/169 (12%)
Query: 10 NRRYAYGEV-LINPVTVRNLRLRWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNG 68
N+ + GE L+ + + ++ W G ++ + P VA+ VV + +G L A N G
Sbjct: 122 NKIFVGGESGLLAALNAEDGQVLWHVVTGGELLSKPTVADDVVVVSTSSGALEAFNVDTG 181
Query: 69 ALIW--EQNLSKLTGLSGT--------GIVVNVTVAVVVAVSRSNGELVWSTQI-DPRPR 117
A +W E L LT L GT G + V V ++NG+ W I +P
Sbjct: 182 AKLWAYEMQLPNLT-LRGTGSAAYEAGGFFIGTADGKVAVVVKNNGQAAWEQAIYNPTGG 240
Query: 118 SQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIW 166
++ T V M +G + L A ++ G+L +++R GR+IW
Sbjct: 241 NEFTRMADVDMTPLILG-----DNLYA---VSYNGNLVSMELRTGRVIW 281
>gi|357383272|ref|YP_004897996.1| putative alcohol dehydrogenase [Pelagibacterium halotolerans B2]
gi|351591909|gb|AEQ50246.1| putative alcohol dehydrogenase precursor [Pelagibacterium
halotolerans B2]
Length = 567
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/232 (21%), Positives = 97/232 (41%), Gaps = 34/232 (14%)
Query: 32 WSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQN-----------LSKLT 80
W+ G TP V NG++Y + + A++A +G ++WE L++
Sbjct: 77 WAMEPGSQ-ETTPIVHNGIMYLANPGAVVQALDATSGEMLWEYRREMPEGSRPGGLNRGL 135
Query: 81 GLSGTGIVVNVTVAVVVAVSRSNGELVWSTQI-DPRPRSQITMSGSVYMGAFYVGLSSLE 139
+ G + + A +VA++ G++ W Q+ D R +T + V G +VG
Sbjct: 136 AIYGNKVYLPTPDAALVAINAETGQVEWEAQVADYENRKSLTAAPLVADGKVFVGFQGCN 195
Query: 140 EALPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNG-GKRGGYS--------GAAVWGSS 190
++C ++ D G +W+T + G G++ + G +W ++
Sbjct: 196 R-FSEEKC-----AMVAYDAETGEELWRTITVERPGEGEQDTWEDIPFALRGGGDIWTTA 249
Query: 191 ---PAIDVIR-RQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAK 238
P D+I Q ++ + ++ S +Y S +AL D+G I W +
Sbjct: 250 TYDPEADLIYIGVSQAKPWSRVSRANEGAS--LYTTSTLALAPDTGEIVWHR 299
>gi|170767596|ref|ZP_02902049.1| outer membrane assembly lipoprotein YfgL [Escherichia albertii
TW07627]
gi|170123930|gb|EDS92861.1| outer membrane assembly lipoprotein YfgL [Escherichia albertii
TW07627]
Length = 392
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 94/226 (41%), Gaps = 24/226 (10%)
Query: 44 PAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG--------------LSGTGIVV 89
PA+A+ VVY G + A+NA +G IW NL++ G +SG + +
Sbjct: 65 PALADNVVYAADRAGLVKAMNADDGKEIWSVNLAEKDGWFSKAPALLSGGVTVSGGHVYI 124
Query: 90 NVTVAVVVAVSRSNGELVWSTQIDPRPRSQ-ITMSGSVYMGAFYVGLSSLEEALPADQCC 148
A V A++ S+G + W T++ S+ + G V + L +L EA A +
Sbjct: 125 GSEKAQVYALNTSDGTVAWQTKVAGEALSRPVVSDGLVLIHTSNGQLQALNEADGAIK-W 183
Query: 149 TFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYS------GAAVWGS--SPAIDVIRRQK 200
T + L +R + GG G S G +W S A +
Sbjct: 184 TVNLDMPSLSLRGESAPATAFGAAVVGGDNGRVSAVLMQQGQMIWQQRISQATGSTEIDR 243
Query: 201 QNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIF 246
++ T P + + + Y ++ ALD+ SG+I W + LG + F
Sbjct: 244 LSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQIMWKRELGSVNDF 289
Score = 42.4 bits (98), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 63/157 (40%), Gaps = 34/157 (21%)
Query: 32 WSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLS----KLTGLSGTGI 87
W + + P V++G+V + NG L A+N +GA+ W NL L G S
Sbjct: 143 WQTKVAGEALSRPVVSDGLVLIHTSNGQLQALNEADGAIKWTVNLDMPSLSLRGESAPAT 202
Query: 88 VVNVTVA-----VVVAVSRSNGELVW---------STQIDPRPRSQITMSGSVYMGAFYV 133
V V AV G+++W ST+ID S + + V G +
Sbjct: 203 AFGAAVVGGDNGRVSAVLMQQGQMIWQQRISQATGSTEID--RLSDVDTTPVVVNGVVF- 259
Query: 134 GLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYM 170
+ G+L LD+R+G+I+W+ +
Sbjct: 260 -------------ALAYNGNLTALDLRSGQIMWKREL 283
Score = 38.5 bits (88), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 60/131 (45%), Gaps = 19/131 (14%)
Query: 39 DISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG--LSGTGIVVNVTVAVV 96
D+ TP V NGVV+ ++NG L A++ +G ++W++ L + + G I + V
Sbjct: 246 DVDTTPVVVNGVVFALAYNGNLTALDLRSGQIMWKRELGSVNDFIVDGNRIYLVDQNDRV 305
Query: 97 VAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAK 156
+A++ G +W TQ D R + S +Y G VG S G L
Sbjct: 306 MALTIDGGVTLW-TQSDLLHR--LLTSPVLYNGNLVVGDS--------------EGYLHW 348
Query: 157 LDVRNGRIIWQ 167
+ V +GR + Q
Sbjct: 349 IKVEDGRFVAQ 359
>gi|167764229|ref|ZP_02436356.1| hypothetical protein BACSTE_02614 [Bacteroides stercoris ATCC
43183]
gi|167698345|gb|EDS14924.1| PQQ enzyme repeat protein [Bacteroides stercoris ATCC 43183]
Length = 609
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 71/296 (23%), Positives = 115/296 (38%), Gaps = 37/296 (12%)
Query: 25 VRNLRLRWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTGLSG 84
++N + WSF +GK I TPAV+ G+V F S + +Y ++A NG L+W
Sbjct: 311 LKNGKKLWSFQSGKRIVGTPAVSEGIVVFGSADCKIYGLDAQNGNLLW------------ 358
Query: 85 TGIVVNVTVAVVVAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALP- 143
V V+ AV+ NG + + D R+ +G V + G+ E P
Sbjct: 359 ---TVEAAEPVLGAVTIENG-IAYIGASDHTFRAVNIRTGEVKWA--FAGVKGYIETKPL 412
Query: 144 -ADQCCTF---RGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYSGAAVWGSSPAIDVIRRQ 199
D F +L L+ +G+ +W+ G R +S AAVW + V
Sbjct: 413 VTDNKVIFGAWDNTLYALNKADGKELWKW----TGGLTRMHFSPAAVWPVAADGKVFITD 468
Query: 200 KQNNQTTKPTHPDQCI--SSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPD 257
Q T + + + L D RI ++K + + Y T + P
Sbjct: 469 PQRAMTAIDIETGNTVWRTFQSMVRETIGLSEDKERI-YSKTMNDSIVCYSTK--GDQPH 525
Query: 258 CPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDIIWFKLAG 313
N+ + AP + + NG VV K G +A + +G ++W G
Sbjct: 526 KLWASNVGFGYEHAPS-MQVEKNG----VVFGSTKEGLIFALEAATGKVLWKHKTG 576
>gi|387126508|ref|YP_006295113.1| methanol dehydrogenase large subunit protein [Methylophaga sp.
JAM1]
gi|386273570|gb|AFI83468.1| Methanol dehydrogenase large subunit protein [Methylophaga sp.
JAM1]
Length = 592
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 79/360 (21%), Positives = 139/360 (38%), Gaps = 87/360 (24%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAG--KDISATPAVANGVVY----FP 54
W+ GD N RY+ I V +L + WSF G + V +G +Y FP
Sbjct: 34 WVMPAGDYANTRYSE-LTQITKDNVNDLNMAWSFSTGVLRGHEGNALVMDGTMYVHTPFP 92
Query: 55 SWNGYLYAVNAFN-GALIWE----QNLSKLT----------GLS-GTG-IVVNVTVAVVV 97
+ ++A++ N GA+ W+ QN + GLS G G I +N +V
Sbjct: 93 N---IVFALDLNNDGAIKWKYEPKQNYDETVPVMCCDTVNRGLSYGDGKIFLNQADTTLV 149
Query: 98 AVSRSNGELVWSTQ-IDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAK 156
A+ GE+VWS + DP+ + T + V+ VG+S E + RG +
Sbjct: 150 ALDMETGEVVWSDKRDDPKVGATSTAAAHVFDDKIIVGISGGEFGV--------RGYVQA 201
Query: 157 LDVRNGRIIWQTYML-PDN-------------------------GGKRGGYSGAAVWG-- 188
D +G +++ Y + PD+ G + G WG
Sbjct: 202 YDF-DGNTVYKAYSVGPDDEMLIDPDKTMSMLKPVGKDSSLKSWQGDQWKIGGGTTWGWY 260
Query: 189 -SSPAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFY 247
P ++ N T P Q + + ++ D+D+G W + +D +
Sbjct: 261 SYDPDLNQFYYGSGNPSTWNPV---QRPGDNKWTMTLFGRDLDTGMAKWVYQMTPFDEWD 317
Query: 248 FTCLVPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
+ + N +L+ G+ R ++V ++GFA+ DR++G+++
Sbjct: 318 YDGINEN------------------VLVDQKIKGKMRKMLVHFDRNGFAYTMDRETGELL 359
>gi|312961820|ref|ZP_07776318.1| quinoprotein ethanol dehydrogenase [Pseudomonas fluorescens WH6]
gi|311284079|gb|EFQ62662.1| quinoprotein ethanol dehydrogenase [Pseudomonas fluorescens WH6]
Length = 591
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 70/333 (21%), Positives = 125/333 (37%), Gaps = 74/333 (22%)
Query: 20 INPVTVRNLRLRWSFYAG----KDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQN 75
+N V++LR W+F G + A P V +GV+Y ++AV+A G +W+ +
Sbjct: 62 LNVDNVKDLRPVWAFSFGGEKQRGQQAQPMVKDGVMYLTGSYSRVFAVDARTGKKLWQYD 121
Query: 76 -------------LSKLTGLSGTGIVVNVTVAVVVAVSRSNGELVWSTQI-DPRPRSQIT 121
+++ L G + A +VA+++ G++VWS ++ D + I+
Sbjct: 122 ARLPDDIRPCCDVINRGVALYGDLVFFGTLDAKLVALNKDTGKVVWSKKVADHKEGYSIS 181
Query: 122 MSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQT--------YMLPD 173
+ V G G++ E + G + D +NG ++W Y+ D
Sbjct: 182 AAPLVINGKLITGVAGGEFGV--------VGKIEAYDPKNGDLLWSRPTVEGHMGYVYKD 233
Query: 174 NGGKRGGYSGAA--------VW---GSSPAIDVIRRQKQN-----NQTTKPTHPDQCISS 217
G SG +W G++P + + N P +
Sbjct: 234 GKAVENGISGGEAGKTWPGDLWKTGGAAPWLGGYYDPETNLLLFGTGNPAPWNSHLRPGD 293
Query: 218 DIYANSIVALDIDSGRIAW---AKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPML 274
++Y++S +AL+ D G I W + P G+D LV N
Sbjct: 294 NLYSSSRLALNPDDGTIKWHFQSTPHDGWDYDGVNELVSFN------------------- 334
Query: 275 LTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
S G+ ++GF + DR +G I
Sbjct: 335 --YSEGGKEIKAAATADRNGFFYVLDRTNGKFI 365
>gi|329956039|ref|ZP_08296810.1| PQQ enzyme repeat protein [Bacteroides clarus YIT 12056]
gi|328524798|gb|EGF51852.1| PQQ enzyme repeat protein [Bacteroides clarus YIT 12056]
Length = 624
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 69/291 (23%), Positives = 112/291 (38%), Gaps = 37/291 (12%)
Query: 25 VRNLRLRWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTGLSG 84
++N + WSF +GK I TPAV+ G+V F S + +Y +NA NG L+W
Sbjct: 328 LKNGKKLWSFQSGKRIVGTPAVSEGIVVFGSADCKIYGLNAQNGNLLW------------ 375
Query: 85 TGIVVNVTVAVVVAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALP- 143
V V+ AV+ NG + + D R+ +G V + G+ E P
Sbjct: 376 ---TVKAAAPVLGAVTIDNG-IAYIGASDHTFRAVNIHTGDVKWN--FAGVKGYIETKPL 429
Query: 144 -ADQCCTF---RGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYSGAAVWGSSPAIDVIRRQ 199
D F +L LD +G+ +W+ G R +S AAVW + V
Sbjct: 430 VTDNKVIFGAWDNTLYALDKADGKELWKW----TGGLTRMHFSPAAVWPVASDGKVFITD 485
Query: 200 KQNNQTTKPTHPDQCI--SSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPD 257
Q T + + + L D RI ++K + + Y + P
Sbjct: 486 PQRAMTAIDLKTGNTVWRTFQSMVRETIGLSEDGERI-YSKTMNDSIVCY--SAKGDQPH 542
Query: 258 CPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDIIW 308
N+ + AP + + G +V K G +A + +G ++W
Sbjct: 543 ELWASNVGFGYEHAPS-MQVEKEG----IVFGSTKEGLIFALEAKTGKVLW 588
>gi|238758838|ref|ZP_04620011.1| hypothetical protein yaldo0001_24190 [Yersinia aldovae ATCC 35236]
gi|238702946|gb|EEP95490.1| hypothetical protein yaldo0001_24190 [Yersinia aldovae ATCC 35236]
Length = 393
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 64/158 (40%), Gaps = 30/158 (18%)
Query: 29 RLRWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLS----KLTGLSG 84
++ W + + P V++GVV + NG L A+N +GA+ W NL L G S
Sbjct: 141 QVAWQTVVAGEALSRPVVSDGVVLIHTSNGMLQALNESDGAIKWTLNLDTPALSLRGESA 200
Query: 85 TGIVVNVTVA-----VVVAVSRSNGELVWSTQIDP-------RPRSQITMSGSVYMGAFY 132
+ + V AV G+L+W +I P + + + V G Y
Sbjct: 201 PAVAFGAAIVGGDNGRVSAVMMEQGQLIWQQRISPVTGTTEIDRLNDVDTTPVVVDGVVY 260
Query: 133 VGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYM 170
+ G+L LD+R+G+I+W+ M
Sbjct: 261 --------------ALAYNGNLTALDLRSGQIVWKREM 284
Score = 43.5 bits (101), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 86/197 (43%), Gaps = 40/197 (20%)
Query: 51 VYFPSWNGYLYAVNAFNGALIWE-----QNLSKLTGLSGTGIVVNVTVAVVVAVSRSNGE 105
VY S +YA+N+ +G + W+ + LS+ G ++++ + ++ A++ S+G
Sbjct: 123 VYVGSEKAVVYALNSDDGQVAWQTVVAGEALSRPVVSDGV-VLIHTSNGMLQALNESDGA 181
Query: 106 LVWSTQIDPRPRSQITMSG-SVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRI 164
+ W+ +D S S +V GA VG + G ++ + + G++
Sbjct: 182 IKWTLNLDTPALSLRGESAPAVAFGAAIVGGDN--------------GRVSAVMMEQGQL 227
Query: 165 IWQTYMLPDNGGKRGGYSGAAVWGSSPAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSI 224
IWQ + P G + ID + N+ T P D + + Y ++
Sbjct: 228 IWQQRISPVTG--------------TTEID-----RLNDVDTTPVVVDGVVYALAYNGNL 268
Query: 225 VALDIDSGRIAWAKPLG 241
ALD+ SG+I W + +G
Sbjct: 269 TALDLRSGQIVWKREMG 285
>gi|336246646|ref|YP_004590356.1| outer membrane biogenesis protein BamB [Enterobacter aerogenes KCTC
2190]
gi|444355378|ref|YP_007391522.1| Outer membrane protein YfgL, lipoprotein component of the protein
assembly complex (forms a complex with YaeT, YfiO, and
NlpB) [Enterobacter aerogenes EA1509E]
gi|334732702|gb|AEG95077.1| outer membrane biogenesis protein BamB [Enterobacter aerogenes KCTC
2190]
gi|443906208|emb|CCG33982.1| Outer membrane protein YfgL, lipoprotein component of the protein
assembly complex (forms a complex with YaeT, YfiO, and
NlpB) [Enterobacter aerogenes EA1509E]
Length = 392
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 94/226 (41%), Gaps = 24/226 (10%)
Query: 44 PAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG--------------LSGTGIVV 89
PA A+GVVY G + A++A +G +W NL++ G +SG + V
Sbjct: 65 PAFADGVVYAADRKGTVKALHAEDGKEVWSVNLAEKDGWFSRAPALLSGGLTVSGGHVYV 124
Query: 90 NVTVAVVVAVSRSNGELVWSTQIDPRPRSQITMS-GSVYMGAFYVGLSSLEEALPADQCC 148
A + A++ S+G + W +++ S+ +S G V + L +L E A +
Sbjct: 125 GTEKAQLFALNTSDGTVAWQSRVAGEAISRPVVSDGMVLVHTSNGQLQALNETDGAVK-W 183
Query: 149 TFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYS------GAAVWGS--SPAIDVIRRQK 200
T + L +R Y GG G S G +W S A +
Sbjct: 184 TVNLDMPALSLRGESAPATAYGAAIVGGDNGRVSAVLMQQGQMIWQQRISTATGPTEIDR 243
Query: 201 QNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIF 246
N+ T P + + + Y ++ ALD+ SG+I W + LG + F
Sbjct: 244 LNDVDTTPVIVNGVVYTLAYNGNLTALDLRSGQIIWKRELGSVNDF 289
Score = 42.4 bits (98), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 65/139 (46%), Gaps = 13/139 (9%)
Query: 39 DISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG--LSGTGIVVNVTVAVV 96
D+ TP + NGVVY ++NG L A++ +G +IW++ L + + G I + +
Sbjct: 246 DVDTTPVIVNGVVYTLAYNGNLTALDLRSGQIIWKRELGSVNDFIVDGDRIYLVDQNDRL 305
Query: 97 VAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSS--------LEEALPADQCC 148
+A++ G +W TQ D R + S ++Y G+ VG S + A Q
Sbjct: 306 LALTTDGGVTLW-TQSDLLHR--LLTSPALYNGSLVVGDSEGYMHWINPEDGHFVAQQKV 362
Query: 149 TFRGSLAKLDVRNGRIIWQ 167
G L + +GR++ Q
Sbjct: 363 DSSGFLTDPVIADGRLLIQ 381
Score = 41.2 bits (95), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 64/154 (41%), Gaps = 31/154 (20%)
Query: 33 SFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLS----KLTGLSGTGIV 88
S AG+ IS P V++G+V + NG L A+N +GA+ W NL L G S
Sbjct: 145 SRVAGEAIS-RPVVSDGMVLVHTSNGQLQALNETDGAVKWTVNLDMPALSLRGESAPATA 203
Query: 89 VNVTVA-----VVVAVSRSNGELVWSTQI-------DPRPRSQITMSGSVYMGAFYVGLS 136
+ V AV G+++W +I + + + + + G Y
Sbjct: 204 YGAAIVGGDNGRVSAVLMQQGQMIWQQRISTATGPTEIDRLNDVDTTPVIVNGVVY---- 259
Query: 137 SLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYM 170
+ G+L LD+R+G+IIW+ +
Sbjct: 260 ----------TLAYNGNLTALDLRSGQIIWKREL 283
>gi|148554816|ref|YP_001262398.1| quinoprotein glucose dehydrogenase [Sphingomonas wittichii RW1]
gi|148500006|gb|ABQ68260.1| Quinoprotein glucose dehydrogenase [Sphingomonas wittichii RW1]
Length = 720
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 84/351 (23%), Positives = 126/351 (35%), Gaps = 75/351 (21%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAG---------KDISATPAVANGVV 51
W +GG +N Y+ I+ V L + W+F G ++ P V +GV+
Sbjct: 33 WPAYGGGTDNIHYS-SLRQIDTRNVGKLAVAWTFDTGDAFGEGGNASEMECNPIVVDGVM 91
Query: 52 YFPSWNGYLYAVNAFNGALIW-------EQNLSKLTGLSGTGIVVNVTVAVVVAVSRSNG 104
Y S ++A++A G +W E +SK L G + A + SRS
Sbjct: 92 YVVSPRLRVFALDAATGRKLWMFDPNPGETVVSKQR-LRGVSYWSDGREARIFMTSRS-- 148
Query: 105 ELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEE--ALPADQCCTFRGSLAKL----- 157
+ ID R I G+ GL + ++ A+ G L +
Sbjct: 149 ---FLLAIDARTGKAIPSFGAGGRVDLRDGLGRDPKDISVGANTPGIVHGDLVIMGTTGW 205
Query: 158 --------DVRNGRIIWQTYMLPDNGGKRGGY-----------SGAAVWGSSPAIDVIR- 197
D R G+I W + +P G GY +GA W A+D R
Sbjct: 206 APGHIRAYDARTGKIRWTFHTIPQPG--EYGYDSWPKDAWKTINGANAWAGM-ALDGKRG 262
Query: 198 ----RQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVP 253
Q K +++ANS+VALD +GR W +D++
Sbjct: 263 ILFVPTASAGQGDKDFFGGDRKGDNLFANSLVALDAATGRRLWHFQAVHHDLW------- 315
Query: 254 NNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSG 304
D DF P L+T+ GR D V K GF + DR +G
Sbjct: 316 -----------DYDFPAPPSLVTVRRGGRMVDAVAQTSKQGFVYVLDRVTG 355
>gi|116621675|ref|YP_823831.1| quinoprotein glucose dehydrogenase [Candidatus Solibacter usitatus
Ellin6076]
gi|116224837|gb|ABJ83546.1| Quinoprotein glucose dehydrogenase [Candidatus Solibacter usitatus
Ellin6076]
Length = 683
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 78/367 (21%), Positives = 128/367 (34%), Gaps = 85/367 (23%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAGK-------DISATPAVANGVVYF 53
W +G DL+N RY + IN L + W F + TP + NGVVY
Sbjct: 30 WPTYGADLHNSRYRPLD-QINSTNFSKLEVAWRFKTDSLGTRPEYKLEGTPLMVNGVVYA 88
Query: 54 PSWNGYL-YAVNAFNGALIW-------EQNLSKLTGLSGTG-----------IVVNVTVA 94
+ + A++A G L+W + + LSG G I+
Sbjct: 89 TAGSRRAAIALDAVTGELLWVHGEHEGARGAAAPRQLSGRGLAYWTDGREERILYTTPGY 148
Query: 95 VVVAVSRSNGELVWSTQ----IDPRPRSQITMSGSVYMGAFYVGLSS------------- 137
+VA+ G L+ S +D + T+ + G +G+ S
Sbjct: 149 RLVALDAKTGALIPSFGKGGVVDLKLDDNQTILPDLTTGE--IGIQSAPVVARDVVIVGA 206
Query: 138 -LEEALPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYSGAAVW--------G 188
E + +G + +VR G+ +W + +P G GA W G
Sbjct: 207 AFREGMTPKSMRNNKGYVRGFNVRTGKRLWIFHTIPMKG-----EFGADTWEKGSNEYTG 261
Query: 189 SSPAIDVIRRQKQNNQTTKPTHPD-------QCISSDIYANSIVALDIDSGRIAWAKPLG 241
++ I +Q P ++++ S+V +D+ +G+ W
Sbjct: 262 NTGVWTQISVDEQLGLVYLPVESPTGDYYGGHRPGNNLFGESLVCVDLATGQRKWH---- 317
Query: 242 GYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDR 301
Y + + P D D P+L I+ NGR V K GF + FDR
Sbjct: 318 -YQLVHH-------------PLWDMDISSGPLLADITVNGRAVKAVAQPTKQGFLYVFDR 363
Query: 302 DSGDIIW 308
+G +W
Sbjct: 364 VTGKPVW 370
>gi|89069407|ref|ZP_01156762.1| glucose dehydrogenase [Oceanicola granulosus HTCC2516]
gi|89045037|gb|EAR51115.1| glucose dehydrogenase [Oceanicola granulosus HTCC2516]
Length = 635
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 82/362 (22%), Positives = 131/362 (36%), Gaps = 85/362 (23%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAGKDIS------------ATPAVAN 48
W + G+L ++++ + I P V L W ++ G D+S +TP AN
Sbjct: 24 WTSFHGNLAAQKFSPAD-QITPDNVSALERAWEYHTG-DVSDGSGDLPPTYFNSTPIYAN 81
Query: 49 GVVYFPSWNGYLYAVNAFNGALIWE----QNLSKLT--GLSGTGI--------------- 87
G +Y + + A++ G IW +L +LT GL G+
Sbjct: 82 GTLYIGTPFYRIIALDPATGTEIWTYDTGSSLEQLTQPGLKTRGVSYWESASPSADEPCQ 141
Query: 88 ---VVNVTVAVVVAVSRSNGELV-------------WSTQIDPRPRSQITMSGSVYMGAF 131
+ A + AV G W+T D P S I +++
Sbjct: 142 KIVYMGTNDAKMHAVDAETGAPCEAFGDGGVLDLNQWNTTNDKWPLS-ILQPPTIHGDQV 200
Query: 132 YVGLSSLE----EALPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYSGAAVW 187
G S + EA P GS+ D + G W+ +P++ R G A VW
Sbjct: 201 VTGWSGYDFRYAEAPP--------GSVFAFDAQTGEKNWEIQFIPEDIRPRTG--TANVW 250
Query: 188 GSSPAIDVIRRQKQNNQTTKPTHPDQCISSDI-YANSIVALDIDSGRIAWAKPLGGYDIF 246
D + P + +I A S+ A DI++G I W++ L +DI+
Sbjct: 251 THMTVDDERGILYMPVSSPSPNFWGGNRTEEIPLATSVTAADIETGEILWSQQLIHHDIW 310
Query: 247 YFTCLVPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDI 306
D D AP L+ + +G +V K G + FDR +G+
Sbjct: 311 ------------------DYDTVAAPTLIDVEKDGETVPALVQTTKQGLFFVFDRVTGEP 352
Query: 307 IW 308
IW
Sbjct: 353 IW 354
>gi|291334286|gb|ADD93948.1| pyrrolo quinoline quinone [uncultured marine bacterium
MedDCM-OCT-S09-C199]
Length = 652
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 71/310 (22%), Positives = 116/310 (37%), Gaps = 67/310 (21%)
Query: 38 KDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG---LSGTGIVVNVTVA 94
+ + ATP V + ++F S +YAV+A G W + K+ G VVN VA
Sbjct: 16 RALEATPIVVDDTMFFSSTWSRVYAVDARTGETKWSYD-PKVPGEWARKACCDVVNRGVA 74
Query: 95 V-------------VVAVSRSNGELVWS--TQIDPRPRSQITMSGSVYMGAFYVGLSSLE 139
V +V++ + G +VW T ID IT + V G ++G E
Sbjct: 75 VYKGRVYVGTLDGRLVSLDAATGSVVWEVDTLIDRTRFYTITGAPRVANGKVFIGNGGAE 134
Query: 140 EALPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNGGK--------------RGGY---- 181
+ RG + D +G +W+ + +P + +GG
Sbjct: 135 FGV--------RGYVTAYDAESGDEVWRFFTVPGDPSLPFEHPEMELAAETWKGGSWWEF 186
Query: 182 -SGAAVWGS---SPAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWA 237
G VW S P + + N +++ +S+VALD D+G + W
Sbjct: 187 GGGGTVWNSIVYDPDFNNVYLGVGNGSPWTRVIRSPGGGDNLFLSSVVALDADTGAMKW- 245
Query: 238 KPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAW 297
+Y T PG N D + L + +G R V++ K+GF +
Sbjct: 246 --------YYQTT---------PGDNWDYTAVQDMALADMEVDGEMRKVLLQAPKNGFFY 288
Query: 298 AFDRDSGDII 307
DR G ++
Sbjct: 289 VLDRKDGKLL 298
>gi|157144554|ref|YP_001451873.1| outer membrane protein assembly complex subunit YfgL [Citrobacter
koseri ATCC BAA-895]
gi|157081759|gb|ABV11437.1| hypothetical protein CKO_00274 [Citrobacter koseri ATCC BAA-895]
Length = 392
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 92/226 (40%), Gaps = 24/226 (10%)
Query: 44 PAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG--------------LSGTGIVV 89
PA A+ VVY G + AVNA +G +W NL++ G +SG + V
Sbjct: 65 PAYADNVVYAADRKGTVKAVNADDGKEVWSVNLAEKDGWFSRAPALLSGGVTVSGGHVYV 124
Query: 90 NVTVAVVVAVSRSNGELVWSTQIDPRPRSQ-ITMSGSVYMGAFYVGLSSLEEALPADQCC 148
A V A++ ++G W T++ S+ + G V + L +L EA A +
Sbjct: 125 GSEKAQVYALNAADGTTAWQTKVAGEALSRPVVSDGLVLIHTSNGQLQALNEADGAIK-W 183
Query: 149 TFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYS------GAAVWGS--SPAIDVIRRQK 200
T + L +R Y GG G S G +W S A +
Sbjct: 184 TVNLDMPSLSLRGESAPATAYGAAIVGGDNGRVSAVLMQQGQMIWQQRISQATGSTEIDR 243
Query: 201 QNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIF 246
++ T P + + + Y ++ ALD+ SG+I W + LG + F
Sbjct: 244 LSDVDTTPVIVNGVVYALAYNGNLTALDLRSGQIMWKRELGSVNDF 289
Score = 42.4 bits (98), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 63/157 (40%), Gaps = 34/157 (21%)
Query: 32 WSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLS----KLTGLSGTGI 87
W + + P V++G+V + NG L A+N +GA+ W NL L G S
Sbjct: 143 WQTKVAGEALSRPVVSDGLVLIHTSNGQLQALNEADGAIKWTVNLDMPSLSLRGESAPAT 202
Query: 88 VVNVTVA-----VVVAVSRSNGELVW---------STQIDPRPRSQITMSGSVYMGAFYV 133
+ V AV G+++W ST+ID S + + + G Y
Sbjct: 203 AYGAAIVGGDNGRVSAVLMQQGQMIWQQRISQATGSTEID--RLSDVDTTPVIVNGVVY- 259
Query: 134 GLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYM 170
+ G+L LD+R+G+I+W+ +
Sbjct: 260 -------------ALAYNGNLTALDLRSGQIMWKREL 283
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 62/131 (47%), Gaps = 19/131 (14%)
Query: 39 DISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG--LSGTGIVVNVTVAVV 96
D+ TP + NGVVY ++NG L A++ +G ++W++ L + + G I + +
Sbjct: 246 DVDTTPVIVNGVVYALAYNGNLTALDLRSGQIMWKRELGSVNDFIVDGDRIYLVDQNDRI 305
Query: 97 VAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAK 156
+A++ G +W TQ D R + S ++Y G VG S G +
Sbjct: 306 LALTTDGGVTLW-TQSDLLHR--LLTSPALYNGNLVVGDS--------------EGYMHW 348
Query: 157 LDVRNGRIIWQ 167
++V +GR + Q
Sbjct: 349 INVEDGRFVAQ 359
>gi|16579770|gb|AAK27220.2| 1-butanol dehydrogenase BDH precursor [Thauera butanivorans]
Length = 691
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 79/354 (22%), Positives = 124/354 (35%), Gaps = 79/354 (22%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSF--YAGKDISATPAVANGVVYFPSWNG 58
W HG D RY+ I P + L L WS+ + + + ATP V +GV+Y +
Sbjct: 43 WRTHGYDDAGTRYS-PLAQITPDNAKELGLVWSYDLESSRGVEATPIVVDGVMYVTAPWS 101
Query: 59 YLYAVNAFNGALIW--EQNLSKLTGLSGTGIVVNVTVAV-------------VVAVSRSN 103
++A++ +G +W + + + G + VVN VAV +VA+
Sbjct: 102 VVHALDVRSGKRLWTYDPEVPREKGKNACCDVVNRGVAVHEGKVFVGSLDGRLVAIDART 161
Query: 104 GELVWS--TQIDPRPRSQITMSGSVYMGAFYVGLSSLEEAL------------------- 142
G+ VW T ID IT + V G +G E +
Sbjct: 162 GKRVWERNTLIDDDKPYTITGAPRVIKGKVVIGNGGAEFGVRGYITAYDPTAASRPGVVP 221
Query: 143 -PADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYSGAAVWGSSPAIDVIRRQKQ 201
P D F + + + Q +G +R G +D + R+
Sbjct: 222 GPGDPSLPFEDASMEAAAKTWDPAGQVL---GSGRRRHGVE----------LDGLYRKAG 268
Query: 202 NNQTTKPTHP--------DQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVP 253
T+ P P ++Y SIVAL D+G W
Sbjct: 269 FCCTSAPATPSPWSHRKRSPAGGDNLYTASIVALRPDTGEYVW----------------- 311
Query: 254 NNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
+ P N D + +L I G+ R V++ K+GF + DR G I
Sbjct: 312 -HYQQTPADNWDYTSTQDLILADIELGGKPRKVILHAPKNGFFFVIDRTDGKFI 364
>gi|433419904|ref|ZP_20405375.1| PQQ enzyme repeat domain protein [Haloferax sp. BAB2207]
gi|432199324|gb|ELK55512.1| PQQ enzyme repeat domain protein [Haloferax sp. BAB2207]
Length = 419
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 30/49 (61%)
Query: 31 RWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKL 79
RWSF AG I TPA A+GVVY S++ +LYA+NA G W + L
Sbjct: 110 RWSFEAGHRIEGTPAHADGVVYVGSYDKHLYALNAETGEERWSRGFGGL 158
Score = 38.1 bits (87), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 62/146 (42%), Gaps = 13/146 (8%)
Query: 30 LRWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTGLSGTGIVV 89
+ W+F A +P VA+G VY S + LYA++A G W + + GT
Sbjct: 69 VEWTFEADDAFWGSPIVADGTVYIGSADSALYALDAETGEERW--SFEAGHRIEGTPAHA 126
Query: 90 NVTVAV------VVAVSRSNGELVWSTQIDPRPRSQITM-SGSVYMGAFYVGLSSLEEAL 142
+ V V + A++ GE WS R T+ G+VY G VG +L A
Sbjct: 127 DGVVYVGSYDKHLYALNAETGEERWSRGFGGLIRGSPTVWDGTVYTG---VGCHNLACAW 183
Query: 143 PADQC-CTFRGSLAKLDVRNGRIIWQ 167
A++ + G + LD G W+
Sbjct: 184 YAEEANVSETGWVYALDAETGETEWR 209
Score = 37.7 bits (86), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 25/44 (56%)
Query: 29 RLRWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIW 72
+ W++ I ++PAVA G VYF WNG ++A +A G W
Sbjct: 245 EVEWTYETRDMIWSSPAVAYGSVYFTDWNGNVHAADAATGEQEW 288
>gi|404485243|ref|ZP_11020441.1| hypothetical protein HMPREF9448_00853 [Barnesiella intestinihominis
YIT 11860]
gi|404338678|gb|EJZ65123.1| hypothetical protein HMPREF9448_00853 [Barnesiella intestinihominis
YIT 11860]
Length = 622
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 72/293 (24%), Positives = 116/293 (39%), Gaps = 39/293 (13%)
Query: 29 RLRWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTGLSGTGIV 88
R +WSF + I TPA VV F S + +Y +NA +G L+W+
Sbjct: 324 RKQWSFKSDMRIIGTPAADKNVVVFGSADMNIYGLNASDGRLLWK--------------- 368
Query: 89 VNVTVAVVVAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPA--DQ 146
+N V+ AV+ NG + + D + R+ SG+V Y G+ E P D
Sbjct: 369 INTEAPVLGAVTIRNG-IAYIGGSDHKFRAIDIKSGTVVWS--YDGVEGYIETKPLVYDN 425
Query: 147 CCTF---RGSLAKLDVRNGRIIWQTYMLPDNGGKRGG-YSGAAVWGSSPAIDVIRRQKQN 202
F +L LD + G+ +W+ + GK G YS AAVW + V +
Sbjct: 426 LVIFGAWDKNLYALDKKTGKEVWKWHE-----GKPGRFYSAAAVWPVAANGKVFIADPER 480
Query: 203 NQTTKPTHPDQCI--SSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPP 260
T + + + + V L D RI ++K + + Y T + P+
Sbjct: 481 VLTAIDASTGKTVWRTKESMVRETVGLSEDKRRI-YSKTMNDSVVCYSTTT--DFPEKIW 537
Query: 261 GPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDIIWFKLAG 313
N+ + AP + + G VV K+G + D +G ++W G
Sbjct: 538 ASNVGFGYEHAPS-MPVEKEG----VVFGSTKNGLMFGLDAHTGKVLWKHKVG 585
>gi|160887851|ref|ZP_02068854.1| hypothetical protein BACUNI_00254 [Bacteroides uniformis ATCC 8492]
gi|156862681|gb|EDO56112.1| PQQ enzyme repeat protein [Bacteroides uniformis ATCC 8492]
Length = 619
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 67/296 (22%), Positives = 115/296 (38%), Gaps = 47/296 (15%)
Query: 25 VRNLRLRWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIW-----EQNLSKL 79
++N + WSF +GK I TPAV+ G+V F S + +Y +NA +G+L+W E L +
Sbjct: 323 LKNGKKLWSFESGKRIVGTPAVSEGIVVFGSADRRIYGLNAKDGSLLWTVEAAEPVLGAV 382
Query: 80 TGLSGTGIVVNVTVAVVVAVSRSNGELVWSTQ-----IDPRPRSQITMSGSVYMGAFYVG 134
T G + + A A+ G+++W+ I+ +P + V GA+
Sbjct: 383 TIADGRA-YIGASDATFRAIDIHTGKVIWAYTSVKGYIETKP---LVTEDKVIFGAWDNT 438
Query: 135 LSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYSGAAVWGSSPAID 194
L +L +A NG +W+ G R +S A VW +
Sbjct: 439 LYALSKA-------------------NGHELWKW----TGGLTRMHFSPATVWPVATDGK 475
Query: 195 VIRRQKQNNQTTKPTHPDQCI--SSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLV 252
V Q T H + + + L D RI ++K + + Y
Sbjct: 476 VFITDPQRAMTAIDIHTGNTVWRTFQSMVRETIGLSEDGERI-YSKTMNDSIVCY--AAQ 532
Query: 253 PNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDIIW 308
+ P N+ + AP + + G V+ K G +A + +G ++W
Sbjct: 533 GDTPRELWATNVGFGYEHAPS-MQVEKEG----VMFGSTKEGLIFALEGKTGKVLW 583
>gi|383770739|ref|YP_005449802.1| quinoprotein glucose dehydrogenase [Bradyrhizobium sp. S23321]
gi|381358860|dbj|BAL75690.1| quinoprotein glucose dehydrogenase [Bradyrhizobium sp. S23321]
Length = 656
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 41/89 (46%), Gaps = 18/89 (20%)
Query: 220 YANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTIST 279
+ANS+VAL I++G + WA +D++ D D P L + T
Sbjct: 263 HANSVVALRIETGELVWAFQTVHHDVW------------------DYDLPAQPTLTRLDT 304
Query: 280 NGRFRDVVVAVQKSGFAWAFDRDSGDIIW 308
RDVV+ K GF + DRD+G +W
Sbjct: 305 GEGQRDVVIQPTKQGFVFVLDRDTGKPVW 333
>gi|398939270|ref|ZP_10668444.1| PQQ-dependent dehydrogenase, methanol/ethanol family [Pseudomonas
sp. GM41(2012)]
gi|398164395|gb|EJM52533.1| PQQ-dependent dehydrogenase, methanol/ethanol family [Pseudomonas
sp. GM41(2012)]
Length = 591
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 72/351 (20%), Positives = 134/351 (38%), Gaps = 75/351 (21%)
Query: 2 LNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAG----KDISATPAVANGVVYFPSWN 57
+ +G + +RY+ + L N V++LR W+F G + A P + +GV+Y
Sbjct: 45 VTNGLGVQGQRYSPLDTL-NVNNVKDLRPVWAFSFGGEKQRGQQAQPMIKDGVMYMTGSY 103
Query: 58 GYLYAVNAFNGALIWEQN-------------LSKLTGLSGTGIVVNVTVAVVVAVSRSNG 104
++AV+A G +W+ + +++ L G ++ A +VA+++ G
Sbjct: 104 SRVFAVDARTGKKLWQYDARLPDDIRPCCDVINRGVALYGDLVIFGTLDAKLVALNKDTG 163
Query: 105 ELVWSTQI-DPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGR 163
++VWS ++ D + I+ + V G G++ E + G + D +NG
Sbjct: 164 KVVWSKKVADHKEGYSISAAPLVINGKLITGVAGGEFGV--------VGKIEAYDPKNGD 215
Query: 164 IIWQT--------YMLPDNGGKRGGYSGAA--------VW---GSSPAIDVIRRQKQN-- 202
++W Y D G SG +W G++P + + N
Sbjct: 216 LLWTRPTVEGHMGYTYKDGKAVENGISGGEAGKTWPGDLWKTGGAAPWLGGYYDPETNLL 275
Query: 203 ---NQTTKPTHPDQCISSDIYANSIVALDIDSGRIAW---AKPLGGYDIFYFTCLVPNNP 256
P + ++Y++S +AL+ D G I W + P G+D LV N
Sbjct: 276 LFGTGNPAPWNSHLRPGDNLYSSSRLALNPDDGTIKWHFQSTPHDGWDYDGVNELVSFN- 334
Query: 257 DCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
+ G+ ++GF + DR +G I
Sbjct: 335 --------------------YTEGGKEIKAAATADRNGFFYVLDRTNGKFI 365
>gi|456354690|dbj|BAM89135.1| quinoprotein ethanol dehydrogenase [Agromonas oligotrophica S58]
Length = 563
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 77/343 (22%), Positives = 130/343 (37%), Gaps = 63/343 (18%)
Query: 1 WLNHGGDLNNRRYA-YGEVLINPVTVRNLRLRWSFYAGKDISATPAVANGVVYFP-SWN- 57
W G D N R++ E+ +L +S + + A+P V +Y SW
Sbjct: 33 WAMAGHDYGNTRFSPLKEISTENAGKLSLVYSFSLASLRSNEASPIVIGNTLYVSTSWGP 92
Query: 58 GYLYAVNAFNGALIW----------------EQNLSKLTGLSGTGIVVNVTVAVVVAVSR 101
Y+YA++A GA W + N +T G + V + A+
Sbjct: 93 KYVYALDAATGARKWTYEPDIPDDVLQYACCDVNNRGVTYADGK-LFVGRLDGKLTALDA 151
Query: 102 SNGELVWSTQI-DPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVR 160
G+ +W++++ D + S IT V G E + RGSL D+
Sbjct: 152 VTGKELWTSKVVDYKQGSVITSPPLVVRDKVITGFGGGEYGV--------RGSLQAFDIN 203
Query: 161 NGRIIWQTYMLPDNG--------GKRGGYSGAAVW--GS-SPAIDVIRRQKQN----NQT 205
+G+ +WQTY +P G G G + G A W GS P D + N N
Sbjct: 204 SGKALWQTYTVPAPGEPGSETWKGDTGLHGGGAAWLVGSYDPKTDTVYWGTSNPGPWNTA 263
Query: 206 TKPT-HPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNL 264
+ T + D +++Y S +A+D ++G I W + P
Sbjct: 264 VRSTGNGDFGKLTNLYTASTLAIDPNNGAIKW------------------HIQGTPADAW 305
Query: 265 DADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
D D +L + G ++ ++GF + +R++G +I
Sbjct: 306 DYDGVNEALLADLKIGGASVPTLMKADRNGFFFVANRETGKVI 348
>gi|334145213|ref|YP_004538423.1| quinoprotein glucose dehydrogenase [Novosphingobium sp. PP1Y]
gi|333937097|emb|CCA90456.1| quinoprotein glucose dehydrogenase [Novosphingobium sp. PP1Y]
Length = 785
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 74/353 (20%), Positives = 127/353 (35%), Gaps = 69/353 (19%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAGKDIS------------ATPAVAN 48
W +GG+ + R++ I P L WSF G + ATP +
Sbjct: 168 WTAYGGNASGTRHSLAG-QITPGNAAKLEKAWSFETGDTVEKRPEIKVPISFMATPLMVE 226
Query: 49 GVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG----LSGTGIVVNVTVAVVVAVSRS-- 102
+YF S G ++A++A G +W ++ G + G+ + A A ++
Sbjct: 227 DRLYFCSPTGKVFALDADTGKQLWMRDPHAKPGNAQMFNCRGVSYHSDPAAKGACAKRVI 286
Query: 103 ----NGELVWSTQIDPRPRSQITMSGSVYMGA----------------FYVGLSSLEEAL 142
+G L+ S + P S GSV + A VG +++ +
Sbjct: 287 SATLDGRLLASDALTGTPCSDFGKDGSVDLDAGMGHIDPLMSYTTSPPAIVGDTAILGSY 346
Query: 143 PADQCCTF--RGSLAKLDVRNGRIIWQ---------TYMLPDNGGKRGGYSGAAVWGSSP 191
D F G + DV+ G+++W P G RG + +V+ + P
Sbjct: 347 VRDNFSRFDPSGVVRAYDVKTGKLLWAWDSGRPDDAPMPGPGEGWTRGSANAWSVFSADP 406
Query: 192 AIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCL 251
+ ++ N T + + YA+SIVALD +G++ W +D++
Sbjct: 407 KLGLVY-LPTGNATPDHVGTHRTPMLERYASSIVALDAATGKVRWHFQTVHHDLW----- 460
Query: 252 VPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSG 304
D D P+L R + A K G + DR +G
Sbjct: 461 -------------DYDMPAQPVLFDFPVGNRTVPALAAPTKRGDIFILDRATG 500
>gi|347757133|ref|YP_004864695.1| PQQ enzyme repeat family protein [Micavibrio aeruginosavorus
ARL-13]
gi|347589651|gb|AEP08693.1| PQQ enzyme repeat family protein [Micavibrio aeruginosavorus
ARL-13]
Length = 440
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 99/240 (41%), Gaps = 52/240 (21%)
Query: 15 YGEVLI-NPVTVRNLRLRWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWE 73
Y E+L+ NP ++ + W A P V +G V+ + + L A+N +GAL+WE
Sbjct: 169 YAEILVMNP---KDGTIAWRKPLPAPSRAAPTVMDGRVFVMTMDNKLLALNTADGALLWE 225
Query: 74 -QNLSKLTGLSGTG--------IVVNVTVAVVVAVSRSNGELVWSTQIDPRPRSQITMSG 124
L++ TGL G +V + + A+ NG + W+ + + +G
Sbjct: 226 FSGLAETTGLLGAASPAASREMVVPAFSSGEIFALRVENGSVAWTDNL-----TSFRRTG 280
Query: 125 SVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYSGA 184
+ A GL L++ + ++ G +A +D R G +WQ + G + +G
Sbjct: 281 GLSGMAAIRGLPVLDKGMVI--AVSYGGRIAAIDERTGARVWQRDI---PGSETPWVAGN 335
Query: 185 AVWGSSPAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYD 244
V+ I+++ N ++ + DSG IAW KPL Y+
Sbjct: 336 HVF--------------------------MITAN---NELIGMSRDSGAIAWVKPLPKYE 366
>gi|440730281|ref|ZP_20910374.1| quinoprotein glucose dehydrogenase [Xanthomonas translucens
DAR61454]
gi|440379230|gb|ELQ15829.1| quinoprotein glucose dehydrogenase [Xanthomonas translucens
DAR61454]
Length = 432
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 43/88 (48%), Gaps = 18/88 (20%)
Query: 221 ANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTISTN 280
ANS+VALD+ S R WA+ L +D++ D D P+L T+ T
Sbjct: 165 ANSLVALDLHSARRVWAQQLVHHDLW------------------DYDLASQPVLATVQTA 206
Query: 281 GRFRDVVVAVQKSGFAWAFDRDSGDIIW 308
R+ V+ K+GF +AFDR G ++
Sbjct: 207 QGPREAVLQATKTGFLFAFDRRDGTPVF 234
>gi|423213010|ref|ZP_17199539.1| hypothetical protein HMPREF1074_01071 [Bacteroides xylanisolvens
CL03T12C04]
gi|392694266|gb|EIY87494.1| hypothetical protein HMPREF1074_01071 [Bacteroides xylanisolvens
CL03T12C04]
Length = 654
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 92/221 (41%), Gaps = 45/221 (20%)
Query: 51 VYFPSWN--GYLYAVNAFNGALIWEQNLSKLTGLSGTGI---------VVNVTVAVVVAV 99
+Y P+ G+L+A++ +G W +S++T G + V N T+ V A+
Sbjct: 321 MYIPTSTPAGHLFAIDVVSGEFKWVFAISQITYGGGALVAPDGTIYQCVRNATINNVYAI 380
Query: 100 SRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPAD---QCCTFRGSLAK 156
+ NG W+ ++D +GAF AL AD C T + +L
Sbjct: 381 N-PNGTQKWAVKLDAA------------IGAF--------PALSADGVLYCLTNKSTLYA 419
Query: 157 LDVRNGRIIWQTYM--------LPDNGGKRGGYSGAAVWGSSPAIDVIRRQKQNNQTTKP 208
LD +G I WQ + D G + AA++ P D I + ++ N T +
Sbjct: 420 LDASSGVIKWQQSLDGATGSAVAIDKAGNVYAGTSAAIYAFKPNKDQIWKLEEVNVTEQA 479
Query: 209 TH--PDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFY 247
T DQ + + + +VA+D+ +G W P D ++
Sbjct: 480 TFALKDQMLYATLKGGGLVAVDMTNGTKKWTYPTTKGDAYF 520
>gi|378950887|ref|YP_005208375.1| Quino(hemo)protein alcohol dehydrogenase, PQQ-dependent
[Pseudomonas fluorescens F113]
gi|359760901|gb|AEV62980.1| Quino(hemo)protein alcohol dehydrogenase, PQQ-dependent
[Pseudomonas fluorescens F113]
Length = 591
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 79/364 (21%), Positives = 145/364 (39%), Gaps = 63/364 (17%)
Query: 2 LNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAG----KDISATPAVANGVVYFPSWN 57
+ +G + +RY+ + L N V++LR W+F G + A P + +GV+Y
Sbjct: 45 VTNGLGVQGQRYSPLDTL-NVNNVKDLRPVWAFSFGGEKQRGQQAQPMIKDGVMYLTGSY 103
Query: 58 GYLYAVNAFNGALIWEQN-------------LSKLTGLSGTGIVVNVTVAVVVAVSRSNG 104
++AV+A G +W+ + +++ L G + A +VA+++ G
Sbjct: 104 SRVFAVDARTGKKLWQYDARLPDDIRPCCDVINRGVALYGDLVFFGTLDAKLVALNKDTG 163
Query: 105 ELVWSTQI-DPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGR 163
++VWS ++ D + I+ + V G G++ E + G ++ D +NG
Sbjct: 164 KVVWSKKVADHKEGYSISAAPMVVNGKLITGVAGGEFGV--------VGQISAFDPKNGA 215
Query: 164 IIWQT--------YMLPDNGGKRGGYSGAA--------VW---GSSPAIDVIRRQKQN-- 202
++W Y+ D G SG +W G++P + + N
Sbjct: 216 LLWTRPTVEGHMGYVYKDGKAVENGISGGEAGKTWPGDLWKTGGAAPWLGGYYDPETNLL 275
Query: 203 ---NQTTKPTHPDQCISSDIYANSIVALDIDSGRIAW---AKPLGGYDIFYFTCLVPNN- 255
P + ++Y++S +AL+ D G I W + P G+D L+ N
Sbjct: 276 LFGTGNPAPWNSHLRPGDNLYSSSRLALNPDDGTIKWHFQSTPHDGWDYDGVNELISFNY 335
Query: 256 ----PDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDIIWFKL 311
D D + + TNG+F V K +A D+D G I+ +
Sbjct: 336 KEGGKDIKAAATADRN---GFFYVLDRTNGKFIRGFPFVDKITWATGLDKD-GRPIYNEA 391
Query: 312 AGPG 315
+ PG
Sbjct: 392 SRPG 395
>gi|244538897|dbj|BAH82940.1| hypothetical protein ICMP_074 [Candidatus Ishikawaella capsulata
Mpkobe]
Length = 419
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 66/135 (48%), Gaps = 21/135 (15%)
Query: 38 KDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKL--TGLSGTGIVVNVTVAV 95
+D+ +TP + +VY ++NG+L A+N GA+IW+Q++ + ++ I V +
Sbjct: 268 RDVDSTPIIIGNIVYCVAYNGHLTALNLETGAVIWQQDIGSIRDVAVNNECIYVVDQNDI 327
Query: 96 VVAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLA 155
+ ++ + NG++ WS + S I +Y V AD RG L
Sbjct: 328 IWSIIQDNGQIKWSQKFLHHLTSPI-----IYKKFLVV----------ADD----RGYLF 368
Query: 156 KLDVRNGRIIWQTYM 170
L++ NG II+Q ++
Sbjct: 369 FLNIANGSIIYQQHI 383
Score = 38.5 bits (88), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 32/141 (22%), Positives = 62/141 (43%), Gaps = 30/141 (21%)
Query: 44 PAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSK---LTGLSGTGIVVNVTVAVVV--- 97
P ++NG+V+ + NG L A+N G ++W +L + L + G V + +++
Sbjct: 176 PVISNGLVFIHTANGILQAINQNTGNVLWNIHLEEDPVLLSMKGECAVAIKSDKLIIGSD 235
Query: 98 -----AVSRSNGELVW----STQIDPRPRSQI--TMSGSVYMGAFYVGLSSLEEALPADQ 146
A + G+L+W + Q++ +P S++ S + +G
Sbjct: 236 NGSVKAFYINTGKLLWQYNITIQVNGKPVSRLRDVDSTPIIIGNIVY------------- 282
Query: 147 CCTFRGSLAKLDVRNGRIIWQ 167
C + G L L++ G +IWQ
Sbjct: 283 CVAYNGHLTALNLETGAVIWQ 303
>gi|392544744|ref|ZP_10291881.1| Pyrrolo-quinoline quinone [Pseudoalteromonas rubra ATCC 29570]
Length = 389
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/167 (21%), Positives = 71/167 (42%), Gaps = 41/167 (24%)
Query: 23 VTVRNLRLRWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNL------ 76
+ V +L WS+ + + P + + ++F S +GYLYA+N + G L+W +L
Sbjct: 68 LNVDQPKLAWSYKTDGLVRSKPTIKHHQIFFSSDDGYLYALNRWQGKLLWRTSLNDADVQ 127
Query: 77 --------------SKLTGL-SGTGIVVNVTVAVVVAVSRSNGELVWSTQIDPRPRSQ-I 120
SK + L G + + + A++RS+G+++W + + + R+ +
Sbjct: 128 RILPANHAPWEFDYSKSSALVQGNKVFIGSGDGHLYAIARSSGKVLWRFKTEGKIRATPV 187
Query: 121 TMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQ 167
G V++ ++ GS+ LD G +WQ
Sbjct: 188 HHQGLVFI-------------------SSWDGSVYALDANTGERVWQ 215
Score = 39.7 bits (91), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 70/172 (40%), Gaps = 19/172 (11%)
Query: 32 WSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTGLSGTGIVVNV 91
W + ++++PA+ +GV+ S + +LY ++ NG L+W+Q + + +
Sbjct: 214 WQYDTQGALTSSPAIVDGVLVIGSRDTHLYGLDPLNGELLWKQAYPGGSWVESSATAAAD 273
Query: 92 TVAVVVAVSRSN---------GELVWSTQIDPRPRSQ-ITMSGSVYMGAFYVGLSSLEEA 141
+ S SN G+L+W + Q + +G+VY+GA + +E
Sbjct: 274 GEHFYIGSSDSNLLNKYHAQSGDLIWQFETGGWSWGQPVAQNGTVYIGA-----TGHDE- 327
Query: 142 LPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYSGAAVWGSSPAI 193
T RG A +D G WQ NG GG GA G I
Sbjct: 328 --PGWFATQRGFFA-IDGHTGEQQWQYQPEKINGFVHGGVYGAPAVGYGKVI 376
>gi|262275122|ref|ZP_06052933.1| pyrrolo-quinoline quinone [Grimontia hollisae CIP 101886]
gi|262221685|gb|EEY72999.1| pyrrolo-quinoline quinone [Grimontia hollisae CIP 101886]
Length = 585
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 70/348 (20%), Positives = 132/348 (37%), Gaps = 69/348 (19%)
Query: 2 LNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAG----KDISATPAVANGVVYFPSWN 57
+ +G L +RY+ + IN TV+++R W+F G + + P V +GV+Y
Sbjct: 44 VTYGLGLRGQRYSPMDT-INRETVKDIRPVWAFSLGGEKQRGQESQPMVKDGVMYVTGSY 102
Query: 58 GYLYAVNAFNGALIWEQNLSKLTGLSGTGIVVNVTVAV-------------VVAVSRSNG 104
++A++A G +W+ + G+ V+N VA+ +VA+ G
Sbjct: 103 SRVFAIDAKTGEELWQYDARLPDGIMPCCDVINRGVALYDDLVIFGTLDAKLVALDAKTG 162
Query: 105 ELVWSTQIDP-RPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGR 163
+ W +D + IT + V G G+S E + G + D + G+
Sbjct: 163 KTRWKKTVDNYQDGYSITAAPIVVKGKVITGVSGGEFGI--------VGKVRAYDAKTGK 214
Query: 164 IIWQT--------YMLPDNGGKRGGYSGAA--------VW---GSSPAIDVIRRQKQN-- 202
++W+ Y+ D G SG A +W G++P + +
Sbjct: 215 LVWERPTVEGHMGYVWKDGKKIENGISGGAPGKTWPADLWKSGGAAPWLGGTYDADTDLL 274
Query: 203 ---NQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCP 259
P + +++++S +A+D D G+I W +F
Sbjct: 275 FFGTGNPAPWNSHMRPGDNLFSSSRLAIDPDDGKIVW----------HFQTT-------- 316
Query: 260 PGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
P D D + + NG+ ++GF + +R +G+ I
Sbjct: 317 PHDGWDFDGVNELISFDYTENGKTVKAAATADRNGFFYVLNRTNGEFI 364
>gi|387791535|ref|YP_006256600.1| PQQ enzyme repeat-containing protein [Solitalea canadensis DSM
3403]
gi|379654368|gb|AFD07424.1| PQQ enzyme repeat-containing protein [Solitalea canadensis DSM
3403]
Length = 395
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/160 (22%), Positives = 70/160 (43%), Gaps = 32/160 (20%)
Query: 27 NLRLRWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNL--SKLTG--- 81
N + W + I +TPA NG V+F + NG +YA++A +G ++W+Q + K+
Sbjct: 61 NGQQLWKYQGDAPIKSTPATVNGTVFFNNANGNMYAIDATSGKMLWKQQMPGEKIVDFWD 120
Query: 82 -------LSGTGIVVNVTVAVVVAVSRSNGELVWSTQIDPRPRSQ-ITMSGSVYMGAFYV 133
L ++V V A + G+ VW+ + D + + + +VY+G
Sbjct: 121 YYLSSPVLHDNLVIVGSGNGAVYAFDQKTGKQVWTFKTDGVVHADPLIQNNTVYVG---- 176
Query: 134 GLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYMLPD 173
+F G+ L+ +G+++W+ + D
Sbjct: 177 ---------------SFDGNFYSLNATSGQLLWKFKTVGD 201
Score = 38.9 bits (89), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 67/155 (43%), Gaps = 18/155 (11%)
Query: 18 VLINPVTVRNLRLRWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLS 77
VLI+ + W F I+ +P V+N + S +G+LYA++ NG +W+
Sbjct: 12 VLISNFITAQPQPFWKFKTAGKIAGSPCVSNNKIIIGSEDGFLYAIDKTNGQQLWKYQGD 71
Query: 78 KLTGLSGTGIVVNVTVAV------VVAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAF 131
+ T VN TV + A+ ++G+++W Q+ P +I V +
Sbjct: 72 --APIKSTPATVNGTVFFNNANGNMYAIDATSGKMLWKQQM---PGEKI-----VDFWDY 121
Query: 132 YVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIW 166
Y+ L + L + G++ D + G+ +W
Sbjct: 122 YLSSPVLHDNLVI--VGSGNGAVYAFDQKTGKQVW 154
>gi|448353043|ref|ZP_21541821.1| pyrrolo-quinoline quinone [Natrialba hulunbeirensis JCM 10989]
gi|445641110|gb|ELY94193.1| pyrrolo-quinoline quinone [Natrialba hulunbeirensis JCM 10989]
Length = 430
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 89/224 (39%), Gaps = 47/224 (20%)
Query: 31 RWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTGLSGTGIVVN 90
WSF G+ I+++PAV +G VY S +G +YA+ A Q T +G G+ +
Sbjct: 118 HWSFATGESITSSPAVVDGTVYIGSMDGTVYALPADEDGT---QPEPTWTFGTGDGVAAS 174
Query: 91 VTVAVVV-----------AVSRSNGELVWS-TQIDPRPRSQITMSGSVYMGAFYVGLSSL 138
TVA V A+ +GEL+W+ T D R+ G+VY G+ L ++
Sbjct: 175 PTVADGVVYIGSNDDHLYALDADDGELLWAFTAEDSIMRAPAVADGTVYFGSTDHSLYAV 234
Query: 139 EEALPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYSGAAVWGSSPAIDVIRR 198
+ ADQ +R A + N P + R
Sbjct: 235 DIDTAADQ---WREGAADDETDN-----------------------------PIDERWRV 262
Query: 199 QKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGG 242
+ + ++PT D + + + A++ DSG I W GG
Sbjct: 263 ETDDRIQSRPTVADGVVYVGSNDDLLYAVEADSGDIRWTFQTGG 306
Score = 38.9 bits (89), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 25/46 (54%)
Query: 29 RLRWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQ 74
L W+F A I PAVA+G VYF S + LYAV+ A W +
Sbjct: 200 ELLWAFTAEDSIMRAPAVADGTVYFGSTDHSLYAVDIDTAADQWRE 245
>gi|448539979|ref|ZP_21623216.1| PQQ enzyme repeat domain protein [Haloferax sp. ATCC BAA-646]
gi|448552085|ref|ZP_21629749.1| PQQ enzyme repeat domain protein [Haloferax sp. ATCC BAA-645]
gi|448553751|ref|ZP_21630629.1| PQQ enzyme repeat domain protein [Haloferax sp. ATCC BAA-644]
gi|445709251|gb|ELZ61082.1| PQQ enzyme repeat domain protein [Haloferax sp. ATCC BAA-645]
gi|445709853|gb|ELZ61676.1| PQQ enzyme repeat domain protein [Haloferax sp. ATCC BAA-646]
gi|445719754|gb|ELZ71432.1| PQQ enzyme repeat domain protein [Haloferax sp. ATCC BAA-644]
Length = 419
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 30/49 (61%)
Query: 31 RWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKL 79
RWSF AG I TPA A+GVVY S++ +LYA++A G W + L
Sbjct: 110 RWSFEAGHRIEGTPAYADGVVYIGSYDKHLYALDAETGEERWSRGFDGL 158
Score = 44.7 bits (104), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 63/146 (43%), Gaps = 13/146 (8%)
Query: 30 LRWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTGLSGTGIVV 89
+ W+F AG +P VA+G VY S + LYA++A G W + + GT
Sbjct: 69 VEWTFEAGDAFWGSPIVADGTVYIGSADSALYALDAETGEKRW--SFEAGHRIEGTPAYA 126
Query: 90 NVTVAV------VVAVSRSNGELVWSTQIDPRPRSQITM-SGSVYMGAFYVGLSSLEEAL 142
+ V + + A+ GE WS D R T+ G+VY G VG +L A
Sbjct: 127 DGVVYIGSYDKHLYALDAETGEERWSRGFDGLIRGSPTVWDGTVYTG---VGCHNLACAW 183
Query: 143 PADQC-CTFRGSLAKLDVRNGRIIWQ 167
A++ + G + LD G W+
Sbjct: 184 YAEEANVSETGWVCALDAETGETEWR 209
Score = 38.1 bits (87), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Query: 9 NNRRY-AYGEVLINPVTVRNLRLRWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFN 67
NNR Y + + ++ + W++ I ++PAVA G VYF WNG ++A +A
Sbjct: 224 NNRVYVGTSDEALYALSRSTGEVEWTYETRDMIWSSPAVAYGSVYFTDWNGNVHAADAAT 283
Query: 68 GALIW 72
G W
Sbjct: 284 GEQEW 288
>gi|32455226|gb|AAP83328.1| putative serine/threonine kinase [Salmonella enterica subsp.
enterica serovar Enteritidis]
Length = 392
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 92/243 (37%), Gaps = 58/243 (23%)
Query: 44 PAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG--------------LSGTGIVV 89
P +A+ VVY G + A+NA +G IW NL + G ++G + +
Sbjct: 65 PVMADNVVYAADRAGVVKALNADDGKEIWSVNLGEKDGWFSRSSALLSGGVTVAGGHVYI 124
Query: 90 NVTVAVVVAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCT 149
A V A++ S+G + W T++ S+ +S V + T
Sbjct: 125 GSEKAEVYALNASDGTIAWQTKVAGEALSRPVVSDGVVL------------------IHT 166
Query: 150 FRGSLAKLDVRNGRIIWQTYMLPDNGGKRG------GYSGAAVWGSSPAIDVIRR----- 198
G L L+ G I W + + RG + A V G + + +
Sbjct: 167 SNGQLQALNQAGGAIKWTVNLDMPSLSLRGESAPATAFGAAIVGGDNGRVSAVLMQQGQM 226
Query: 199 --QKQNNQTTKPTHPDQCISSDI-------------YANSIVALDIDSGRIAWAKPLGGY 243
Q++ +Q T PT D+ D Y ++ ALD+ SG+I W + LG
Sbjct: 227 IWQQRISQATGPTEIDRLSDVDTTPVVVNGVVYALAYNGNLTALDLRSGQIMWKRELGSV 286
Query: 244 DIF 246
+ F
Sbjct: 287 NDF 289
Score = 42.4 bits (98), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 61/157 (38%), Gaps = 30/157 (19%)
Query: 30 LRWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLS----KLTGLSGT 85
+ W + + P V++GVV + NG L A+N GA+ W NL L G S
Sbjct: 141 IAWQTKVAGEALSRPVVSDGVVLIHTSNGQLQALNQAGGAIKWTVNLDMPSLSLRGESAP 200
Query: 86 GIVVNVTVA-----VVVAVSRSNGELVWSTQI-------DPRPRSQITMSGSVYMGAFYV 133
+ V AV G+++W +I + S + + V G Y
Sbjct: 201 ATAFGAAIVGGDNGRVSAVLMQQGQMIWQQRISQATGPTEIDRLSDVDTTPVVVNGVVY- 259
Query: 134 GLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYM 170
+ G+L LD+R+G+I+W+ +
Sbjct: 260 -------------ALAYNGNLTALDLRSGQIMWKREL 283
Score = 40.0 bits (92), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 61/131 (46%), Gaps = 19/131 (14%)
Query: 39 DISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG--LSGTGIVVNVTVAVV 96
D+ TP V NGVVY ++NG L A++ +G ++W++ L + + G I + V
Sbjct: 246 DVDTTPVVVNGVVYALAYNGNLTALDLRSGQIMWKRELGSVNDFIVDGDRIYLVDQNDRV 305
Query: 97 VAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAK 156
+A++ G +W TQ D R + S +Y G VG S G L
Sbjct: 306 LALTTDGGVTLW-TQSDLLHR--LLTSPVLYNGDLVVGDS--------------EGYLHW 348
Query: 157 LDVRNGRIIWQ 167
++V +GR + Q
Sbjct: 349 INVDDGRFVAQ 359
>gi|406912236|gb|EKD51888.1| hypothetical protein ACD_62C00166G0002 [uncultured bacterium]
Length = 383
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 82/190 (43%), Gaps = 40/190 (21%)
Query: 19 LINPVTVRNLRLRWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSK 78
L V +N ++ W+F + I+AT + V F G L +N GAL+W+++ K
Sbjct: 84 LFYAVDRKNGKILWTFENDEGIAATAGLHKDQVVFSDLGGQLICLNRSTGALLWKKSFDK 143
Query: 79 LTGLSGTGIVVNVTVAV-----VVAVSRSNGELVWSTQIDPRPRSQITMSGSVYM----G 129
LS I N V + A+S ++GE +W+ + + ++T+ G + G
Sbjct: 144 -ELLSKPLIRENKIFVVTGEQTITALSLNDGETIWNHALSNYMK-KLTIRGIANIVAENG 201
Query: 130 AFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIW-QTYMLPDNGGKR---------- 178
+ YVGL+ G L KL +GR++W + LP + K
Sbjct: 202 SLYVGLAD--------------GHLYKLGAADGRVLWDKNLALPLSTFKDIDASVVLSQD 247
Query: 179 ----GGYSGA 184
GGYSGA
Sbjct: 248 SLFVGGYSGA 257
Score = 38.9 bits (89), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 39/81 (48%), Gaps = 4/81 (4%)
Query: 43 TPAVANGVVYFPSWNGYLYAVNAFNGALIW----EQNLSKLTGLSGTGIVVNVTVAVVVA 98
+PA+ VY + G YAV+ NG ++W ++ ++ GL +V + ++
Sbjct: 68 SPALGKEAVYIGTQAGLFYAVDRKNGKILWTFENDEGIAATAGLHKDQVVFSDLGGQLIC 127
Query: 99 VSRSNGELVWSTQIDPRPRSQ 119
++RS G L+W D S+
Sbjct: 128 LNRSTGALLWKKSFDKELLSK 148
>gi|398383586|ref|ZP_10541654.1| PQQ-dependent dehydrogenase, methanol/ethanol family [Sphingobium
sp. AP49]
gi|397724602|gb|EJK85067.1| PQQ-dependent dehydrogenase, methanol/ethanol family [Sphingobium
sp. AP49]
Length = 695
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 74/329 (22%), Positives = 126/329 (38%), Gaps = 68/329 (20%)
Query: 20 INPVTVRNLRLRW--SFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLS 77
IN V L L W G P +G++Y+ S ++AV+A G +W +
Sbjct: 47 INDRNVGRLGLAWYQDIDGGGSSLTAPIAVDGILYYASGYSVVHAVDATTGHELWTYDPQ 106
Query: 78 -------KLTGLSGT--------GIVVNVTVAVVVAVSRSNGELVWSTQ-IDPRPRSQIT 121
K+ G G+ + V ++A++ G +WSTQ I I+
Sbjct: 107 SWKAADKKMRGAWGSRGIAYDNGAVYVGTIDGRLIAINARTGHKLWSTQTIGKDDERYIS 166
Query: 122 MSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGY 181
+ V+ G +G + A RG + D + G+ +W+ + +P G + G+
Sbjct: 167 GAPWVFNGKVLIGHGGADFA-------PIRGYVTAYDQKTGKQLWRFHTVP--GDPKLGF 217
Query: 182 SGAAV------W--------GSSPAIDVIRRQKQNNQ----TTKPTHPDQCISS-----D 218
A+ W G A + + + N+ + +Q I S +
Sbjct: 218 ENKAMAMAAKTWTGEWWKYGGGGTAWNAMAYDPKYNRIYIGVGNGSPWNQKIRSPGGGDN 277
Query: 219 IYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTIS 278
++ SIVALD D+G W Y T PG D + L +
Sbjct: 278 LFLCSIVALDADTGEYVW---------HYQTN---------PGETWDFNSAMDMELARLK 319
Query: 279 TNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
+G+ RDV++ K+GF + DR +G +I
Sbjct: 320 IDGQERDVLMHAPKNGFFYVIDRATGKLI 348
>gi|337754682|ref|YP_004647193.1| outer membrane protein YfgL, lipoprotein component of the protein
assembly complex (forms a complex with YaeT, Yfio, and
NlpB) [Francisella sp. TX077308]
gi|391737983|sp|F8GAQ8.1|BAMB_FRAST RecName: Full=Outer membrane protein assembly factor BamB; Flags:
Precursor
gi|336446287|gb|AEI35593.1| Outer membrane protein YfgL, lipoprotein component of the protein
assembly complex (forms a complex with YaeT, YfiO, and
NlpB) [Francisella sp. TX077308]
Length = 521
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 54/244 (22%), Positives = 95/244 (38%), Gaps = 36/244 (14%)
Query: 22 PVTVRNLRLRWSFYAGKD------ISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQN 75
P ++++WS G + +P AN V+ P+ NG Y ++ +G ++W+ +
Sbjct: 35 PPKEAKVKVKWSRKTGNGNGGLPIYNVSPTYANNTVFVPNQNGVAYGLSITDGKIVWKHD 94
Query: 76 ----LSKLTGLSGTGIVVNVTVAVVVAVSRSNGELVWSTQIDPRPRSQITM-SGSVYMGA 130
LS ++ V+ AV + +G+++W T SQ T+ S +Y
Sbjct: 95 TGTILSSQPNTIANAVIFGSVKGVLTAVDQKDGKILWRTDAPSSIFSQPTIYSNHLYTHT 154
Query: 131 FYVGLSSL----------------EEALPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDN 174
++S E LP+D + G ++ T ++
Sbjct: 155 HDGSVTSFDATNGSKVWNVTNNIPEITLPSDSSPIILNDTVMVGSAFGTVLGFTL---ES 211
Query: 175 GGKRGGYSGAAVWGSSPAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRI 234
G + A GSSPA K + T P + + +IVALD D+G++
Sbjct: 212 GDRTINLPVAIAHGSSPA------DKMVDITANPMLYGNYLIFAAFQGAIVALDKDTGKM 265
Query: 235 AWAK 238
WAK
Sbjct: 266 LWAK 269
>gi|386401706|ref|ZP_10086484.1| glucose dehydrogenase [Bradyrhizobium sp. WSM1253]
gi|385742332|gb|EIG62528.1| glucose dehydrogenase [Bradyrhizobium sp. WSM1253]
Length = 682
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 41/89 (46%), Gaps = 18/89 (20%)
Query: 220 YANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTIST 279
+ANS+VAL I++G + WA +D++ D D P L I +
Sbjct: 289 HANSVVALRIETGELVWAFQTVHHDVW------------------DYDLPAQPTLTRIDS 330
Query: 280 NGRFRDVVVAVQKSGFAWAFDRDSGDIIW 308
RDVV+ K GF + DRD+G +W
Sbjct: 331 GDGQRDVVIQPTKQGFVFVLDRDTGKPVW 359
>gi|320161410|ref|YP_004174634.1| hypothetical protein ANT_20080 [Anaerolinea thermophila UNI-1]
gi|319995263|dbj|BAJ64034.1| hypothetical protein ANT_20080 [Anaerolinea thermophila UNI-1]
Length = 482
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 59/117 (50%), Gaps = 7/117 (5%)
Query: 32 WSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTGLSGTGIVVNV 91
W G I + AV G V+F + +G +YA+NA NGA +W+ LS G S +V +
Sbjct: 133 WKTSIGSPILNSVAVDGGKVFFGALDGAVYALNATNGAQVWKNQLSTFQGFSTAPVVADG 192
Query: 92 TV------AVVVAVSRSNGELVWSTQI-DPRPRSQITMSGSVYMGAFYVGLSSLEEA 141
V + A+ ++G+++WS + P ++ +G VY GA + + ++ A
Sbjct: 193 KVMLGGRNGIFYALDPNSGQVLWSYPVGSPILQTAAWNNGKVYFGAMDMRVYAINSA 249
>gi|429091195|ref|ZP_19153883.1| Outer membrane protein YfgL, lipoprotein component of the protein
assembly complex (forms a complex with YaeT, YfiO, and
NlpB) [Cronobacter dublinensis 1210]
gi|426744319|emb|CCJ79996.1| Outer membrane protein YfgL, lipoprotein component of the protein
assembly complex (forms a complex with YaeT, YfiO, and
NlpB) [Cronobacter dublinensis 1210]
Length = 393
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 55/244 (22%), Positives = 97/244 (39%), Gaps = 59/244 (24%)
Query: 44 PAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTGL---------------SGTGIV 88
PA +G VY G + AVN+ +G +W +LS+ TG +G +
Sbjct: 65 PAFLDGTVYAADRRGTVKAVNSQDGKEVWSVDLSEKTGFFSRNRPALLSGGVTAAGAHVY 124
Query: 89 VNVTVAVVVAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCC 148
V A V A++ S+G + W T++ S+ +S + +
Sbjct: 125 VGSEKAQVYALNTSDGSVAWQTKVAGEALSRPVVSDGLVL------------------IH 166
Query: 149 TFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYSGAAVWGSS--------PAIDVIRR-- 198
T G L L+ +G I W + + RG + A+ +G++ + +++R
Sbjct: 167 TSNGMLQALNESDGAIKWTVNLDMPSLSLRGESAPASAFGAAIVGGDNGRVSAVLMQRGQ 226
Query: 199 ---QKQNNQTTKPTHPDQCISSDI-------------YANSIVALDIDSGRIAWAKPLGG 242
Q++ +Q T T D+ D Y ++ ALD+ SG+I W + LG
Sbjct: 227 MIWQQRISQATGATEIDRLSDVDTTPVIVNGVVYALAYNGNLTALDLRSGQIMWKRELGS 286
Query: 243 YDIF 246
+ F
Sbjct: 287 VNDF 290
Score = 41.2 bits (95), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 63/153 (41%), Gaps = 26/153 (16%)
Query: 32 WSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLS----KLTGLSGTGI 87
W + + P V++G+V + NG L A+N +GA+ W NL L G S
Sbjct: 144 WQTKVAGEALSRPVVSDGLVLIHTSNGMLQALNESDGAIKWTVNLDMPSLSLRGESAPAS 203
Query: 88 VVNVTVA-----VVVAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEAL 142
+ V AV G+++W +I SQ T GA + S +
Sbjct: 204 AFGAAIVGGDNGRVSAVLMQRGQMIWQQRI-----SQAT-------GATEIDRLSDVDTT 251
Query: 143 PAD-----QCCTFRGSLAKLDVRNGRIIWQTYM 170
P + G+L LD+R+G+I+W+ +
Sbjct: 252 PVIVNGVVYALAYNGNLTALDLRSGQIMWKREL 284
Score = 39.7 bits (91), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 60/131 (45%), Gaps = 19/131 (14%)
Query: 39 DISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG--LSGTGIVVNVTVAVV 96
D+ TP + NGVVY ++NG L A++ +G ++W++ L + + G I + V
Sbjct: 247 DVDTTPVIVNGVVYALAYNGNLTALDLRSGQIMWKRELGSVNDFIVDGGRIFLVDQSDNV 306
Query: 97 VAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAK 156
+A++ G +W TQ R+ T +Y G+ VG S G L
Sbjct: 307 LALNVEGGVTLW-TQTQLLHRNLTT--PVLYNGSLVVGDS--------------EGYLHW 349
Query: 157 LDVRNGRIIWQ 167
+D NGR + Q
Sbjct: 350 MDTDNGRFVAQ 360
>gi|323135669|ref|ZP_08070752.1| PQQ-dependent dehydrogenase, methanol/ethanol family [Methylocystis
sp. ATCC 49242]
gi|322398760|gb|EFY01279.1| PQQ-dependent dehydrogenase, methanol/ethanol family [Methylocystis
sp. ATCC 49242]
Length = 604
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 81/358 (22%), Positives = 140/358 (39%), Gaps = 82/358 (22%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAG--KDISATPAVANGVVY----FP 54
W++ GD N R++ + I V L W F G + P V V+Y FP
Sbjct: 34 WVSPTGDYANLRHSALK-QITAENVGKLAPAWQFSTGVLRGHEGAPLVVGDVMYLHTPFP 92
Query: 55 SWNGYLYAVNAFNGALIWE----QNLSKL---------TGLS-GTG-IVVNVTVAVVVAV 99
+ N Y + + ++W+ Q+ S + GL+ G G I + +VA+
Sbjct: 93 N-NVYALDLKDPDHKILWKYEPKQDPSVVPVMCCDTVNRGLAYGDGKIFLAQADTTLVAL 151
Query: 100 SRSNGELVWSTQI-DPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLD 158
G+LVWS + DP T + V+ +VG++ E + RG + D
Sbjct: 152 DAKTGKLVWSVKNGDPAKGQTSTAAPHVFKDKVFVGIAGGEFGV--------RGHITAYD 203
Query: 159 VRNGRIIWQTY-MLPDNG---------------GKRGGYS----------GAAVWG---S 189
+++G++ W+ Y M PD+ GK G S G WG
Sbjct: 204 IKDGKLAWRGYSMGPDSDTLMDPEKTTHLGKPVGKDSGISTWQGDQWQIGGGTTWGWYSY 263
Query: 190 SPAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFT 249
P ++++ N T +P Q + ++ +I A D+D+G+ W ++ T
Sbjct: 264 DPELNLVYYGSGNPST---WNPKQRPGDNRWSMTIWARDLDTGKAKW--------VYQMT 312
Query: 250 CLVPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
P D D +L + G R +V ++GF + DR +G+++
Sbjct: 313 ----------PHDEWDYDGINEMVLADQNIGGTTRKTLVHFDRNGFGYTLDRVTGELL 360
>gi|336310634|ref|ZP_08565606.1| outer membrane protein YfgL [Shewanella sp. HN-41]
gi|335866364|gb|EGM71355.1| outer membrane protein YfgL [Shewanella sp. HN-41]
Length = 395
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 75/169 (44%), Gaps = 21/169 (12%)
Query: 10 NRRYAYGEV-LINPVTVRNLRLRWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNG 68
N+ + GE L+ + V + ++ W G ++ + P VA+ VV + G L A N G
Sbjct: 122 NKVFVGGESGLLAALNVEDGQVLWHVVTGGELLSAPTVADDVVVVSTSTGSLEAFNIDTG 181
Query: 69 ALIW--EQNLSKLTGLSGT--------GIVVNVTVAVVVAVSRSNGELVWSTQI-DPRPR 117
+W E L LT L GT G + V V ++NG+ W I +P
Sbjct: 182 VKLWVYEMQLPNLT-LRGTGSAAYEAGGFFIGTADGKVAVVIKNNGQAAWEQAIYNPSGG 240
Query: 118 SQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIW 166
++ T V M +G + L A ++ G+L +++R GR++W
Sbjct: 241 NEFTRMADVDMTPLILG-----DNLYA---VSYNGNLVSMELRTGRVVW 281
>gi|300024354|ref|YP_003756965.1| methanol/ethanol family PQQ-dependent dehydrogenase [Hyphomicrobium
denitrificans ATCC 51888]
gi|299526175|gb|ADJ24644.1| PQQ-dependent dehydrogenase, methanol/ethanol family
[Hyphomicrobium denitrificans ATCC 51888]
Length = 605
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 79/366 (21%), Positives = 133/366 (36%), Gaps = 93/366 (25%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAG--KDISATPAVANGVVY----FP 54
W GD RY+ + I V L++ W+F G + P V ++Y FP
Sbjct: 36 WAIQSGDYAGTRYSALD-QITTANVSELKVAWTFSTGVLRGHEGGPLVIGNIMYVHTPFP 94
Query: 55 SWNGYLYAVNAFN----GALIWE----QNLSKLTGL-----------SGTGIVVNVTVAV 95
+ AV A + +IW+ Q+ S ++ + + I+++
Sbjct: 95 N------AVMALDLNDEQKIIWKYEPKQDASVISVMCCDTVNRGVQYTEGKILLHTADTS 148
Query: 96 VVAVSRSNGELVWSTQIDPRPRSQITMSGS--VYMGAFYVGLSSLEEALPADQCCTFRGS 153
++A+ G +W +D P+ T +G+ + VG+S E + RG
Sbjct: 149 LIALDAKTGTELWKV-LDGDPKQGATGTGAPLIAKDKVIVGVSGGEFGV--------RGY 199
Query: 154 LAKLDVRNGRIIWQTY-MLPDN-------------------------GGKRGGYSGAAVW 187
L D+ +G IW+ Y M PD+ G + G W
Sbjct: 200 LTAYDLYSGNRIWRAYSMGPDSDILVDPEKTTSLGKPVGENSSLDTWNGNQWEIGGGPTW 259
Query: 188 GS---SPAIDVIRRQKQNNQTTKPTH---PDQCISSDIYANSIVALDIDSGRIAWAKPLG 241
G P ++I N T P D+ +A +I A D+D+G W +
Sbjct: 260 GYMAYDPEFNLIYYGTGNPSTWNPAQRAGADRKPIDQKWAMAIFARDLDTGVAKWVYQMT 319
Query: 242 GYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDR 301
+D D D P+L + NGR R V ++GFA+ DR
Sbjct: 320 PFD------------------QWDYDGINEPILTDLEINGRMRKAVTHFDRNGFAYTLDR 361
Query: 302 DSGDII 307
+G+++
Sbjct: 362 VTGELL 367
>gi|124266788|ref|YP_001020792.1| alcohol dehydrogenase [Methylibium petroleiphilum PM1]
gi|124259563|gb|ABM94557.1| putative alcohol dehydrogenase [Methylibium petroleiphilum PM1]
Length = 561
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 71/323 (21%), Positives = 123/323 (38%), Gaps = 80/323 (24%)
Query: 20 INPVTVRNLRLRWSFYAG---KDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNL 76
IN V L++ W G + ATP V +GV+Y + + ++A++A G +IW
Sbjct: 62 INKSNVSKLKVAWIHQPGTITHGLQATPIVIDGVMYTIAPDNNVFALDAATGKIIWRYT- 120
Query: 77 SKLT--------GLSGTGIVVNVTVAVV-------VAVSRSNGELVWSTQIDPRPR---- 117
+KL G + G+ V + VA+ + G+ +WSTQ+ +
Sbjct: 121 AKLDPIVKEVFYGSASRGVTVGRGKVFIGTLDGRFVALDQKTGKELWSTQLSDMKKDYGA 180
Query: 118 ---SQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDN 174
S ++G G G DQ G + ++ G W T+ +P +
Sbjct: 181 LFSSPPQLAGDTLFGGTTGG----------DQPII--GKIFAVNADTGARTW-TFEVPKD 227
Query: 175 GGKRGGYSGAAVWGSS--------PAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVA 226
K V G S P D I N + D ++Y +++A
Sbjct: 228 DPKSWPGDSRKVGGGSAWLPGTYDPTTDTIYIGTSN--AAPDFNHDDRKGDNLYTATLLA 285
Query: 227 LDIDSGRIAWAK---PLG--GYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTISTNG 281
LD +G++ W + P+ +D Y LVP +G
Sbjct: 286 LDPKTGKVKWHRQEVPMDTWDFDAAYEALLVP--------------------------DG 319
Query: 282 RFRDVVVAVQKSGFAWAFDRDSG 304
+ ++V+V + K+GF + D+D+G
Sbjct: 320 KGKNVLVHLNKNGFVYVMDKDTG 342
>gi|70729590|ref|YP_259328.1| quinoprotein ethanol dehydrogenase PedH [Pseudomonas protegens
Pf-5]
gi|68343889|gb|AAY91495.1| quinoprotein ethanol dehydrogenase PedH [Pseudomonas protegens
Pf-5]
Length = 591
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 70/351 (19%), Positives = 133/351 (37%), Gaps = 75/351 (21%)
Query: 2 LNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAG----KDISATPAVANGVVYFPSWN 57
+ +G + +RY+ ++L N V+ LR W+F G + A P + +GV+Y
Sbjct: 45 VTNGLGVQGQRYSPLDIL-NVDNVKELRPVWAFSFGGEKQRGQQAQPLIKDGVMYMTGSY 103
Query: 58 GYLYAVNAFNGALIWEQN-------------LSKLTGLSGTGIVVNVTVAVVVAVSRSNG 104
++AV+A G +W+ + +++ L G + A +VA+++ G
Sbjct: 104 SRVFAVDARTGKKLWQYDARLPDDIRPCCDVINRGVALYGDLVFFGTLDAKLVALNKDTG 163
Query: 105 ELVWSTQI-DPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGR 163
++VWS ++ D + I+ + + G G++ E + G + D +NG
Sbjct: 164 KVVWSKKVADHKEGYSISAAPMMVNGKLITGVAGGEFGV--------VGKIQAYDPKNGE 215
Query: 164 IIWQT--------YMLPDNGGKRGGYSGAA--------VW---GSSPAIDVIRRQKQN-- 202
++W Y+ D G SG +W G++P + + N
Sbjct: 216 LLWMRPTVEGHMGYVYKDGKAIENGISGGEAGKTWPGDLWKTGGAAPWLGGYYDPETNLL 275
Query: 203 ---NQTTKPTHPDQCISSDIYANSIVALDIDSGRIAW---AKPLGGYDIFYFTCLVPNNP 256
P + ++Y++S +AL+ D G I W + P G+D L+ N
Sbjct: 276 LFGTGNPAPWNSHLRPGDNLYSSSRLALNPDDGTIKWHFQSTPHDGWDFDGVNELISFN- 334
Query: 257 DCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
G+ ++GF + DR +G I
Sbjct: 335 --------------------YKEGGKEIKAAATADRNGFFYVLDRTNGKFI 365
>gi|398907501|ref|ZP_10653898.1| PQQ-dependent dehydrogenase, methanol/ethanol family [Pseudomonas
sp. GM50]
gi|398171359|gb|EJM59263.1| PQQ-dependent dehydrogenase, methanol/ethanol family [Pseudomonas
sp. GM50]
Length = 591
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 72/351 (20%), Positives = 135/351 (38%), Gaps = 75/351 (21%)
Query: 2 LNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAG----KDISATPAVANGVVYFPSWN 57
+ +G + +RY+ + L N V++LR W+F G + A P + +GV+Y
Sbjct: 45 VTNGLGVQGQRYSPLDTL-NVDNVKDLRPVWAFSFGGEKQRGQQAQPMIKDGVMYMTGSY 103
Query: 58 GYLYAVNAFNGALIWEQN-------------LSKLTGLSGTGIVVNVTVAVVVAVSRSNG 104
++AV+A G +W+ + +++ L G ++ A +VA+++ G
Sbjct: 104 SRVFAVDARTGRKLWQYDARLPDDIRPCCDVINRGVALYGDLVIFGTLDAKLVALNKDTG 163
Query: 105 ELVWSTQI-DPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGR 163
++VWS ++ D + I+ + V G G++ E + G + D +NG
Sbjct: 164 KVVWSKKVADHKEGYSISAAPLVINGKLITGVAGGEFGV--------VGKIEAYDPKNGD 215
Query: 164 IIWQT--------YMLPDNGGKRGGYSGAA--------VW---GSSPAIDVIRRQKQN-- 202
++W Y+ D G SG +W G++P + + N
Sbjct: 216 LLWTRPTVEGHMGYVYKDGKAVENGISGGEAGKTWPGDLWKTGGAAPWLGGYYDPETNLL 275
Query: 203 ---NQTTKPTHPDQCISSDIYANSIVALDIDSGRIAW---AKPLGGYDIFYFTCLVPNNP 256
P + ++Y++S +AL+ D G I W + P G+D LV N
Sbjct: 276 LFGTGNPAPWNSHLRPGDNLYSSSRLALNPDDGTIKWHFQSTPHDGWDYDGVNELVSFN- 334
Query: 257 DCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
+ G+ ++GF + DR +G I
Sbjct: 335 --------------------YNEGGKEIKAAATADRNGFFYVLDRTNGKFI 365
>gi|333986268|ref|YP_004518875.1| pyrrolo-quinoline quinone repeat-containing protein
[Methanobacterium sp. SWAN-1]
gi|333824412|gb|AEG17074.1| Pyrrolo-quinoline quinone repeat-containing protein
[Methanobacterium sp. SWAN-1]
Length = 412
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 55/111 (49%), Gaps = 9/111 (8%)
Query: 27 NLRLRWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTGLSGTG 86
N ++W + G I ++PAV G VY S +G +YA+NA NG + WE + T
Sbjct: 130 NGDVKWKYKTGNSIESSPAVDGGNVYIGSDDGRIYAINASNGTMDWEYETGNAVKSAPT- 188
Query: 87 IVVNVTVAV------VVAVSRSNGELVWSTQIDPRPRSQITMS-GSVYMGA 130
VV+ + V V A+S NG +W + +S +S G VY+G+
Sbjct: 189 -VVDGVLYVGSDDDKVYAISTKNGTKLWEYTTGDKIKSSPAVSNGIVYVGS 238
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 36/56 (64%)
Query: 23 VTVRNLRLRWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSK 78
++ +N W + G I ++PAV+NG+VY S +G +YA+NA +G+++W + K
Sbjct: 206 ISTKNGTKLWEYTTGDKIKSSPAVSNGIVYVGSGDGKVYALNATDGSIVWTYAMGK 261
Score = 45.4 bits (106), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 56/116 (48%), Gaps = 5/116 (4%)
Query: 20 INPVTVRNLRLRWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWE----QN 75
+N V + + W + G I ++PA+ N +Y S +GYLYA + NG + W+ +
Sbjct: 83 VNAVNLEDGTNLWDYKTGGAIISSPAIVNDTLYIGSTDGYLYAQDTTNGDVKWKYKTGNS 142
Query: 76 LSKLTGLSGTGIVVNVTVAVVVAVSRSNGELVWSTQIDPRPRSQIT-MSGSVYMGA 130
+ + G + + + A++ SNG + W + +S T + G +Y+G+
Sbjct: 143 IESSPAVDGGNVYIGSDDGRIYAINASNGTMDWEYETGNAVKSAPTVVDGVLYVGS 198
Score = 42.0 bits (97), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 64/151 (42%), Gaps = 20/151 (13%)
Query: 20 INPVTVRNLRLRWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWE----QN 75
I + N + W + G + + P V +GV+Y S + +YA++ NG +WE
Sbjct: 163 IYAINASNGTMDWEYETGNAVKSAPTVVDGVLYVGSDDDKVYAISTKNGTKLWEYTTGDK 222
Query: 76 LSKLTGLSGTGIVVNVTVAVVVAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGL 135
+ +S + V V A++ ++G +VW+ + S T+ + + +VG
Sbjct: 223 IKSSPAVSNGIVYVGSGDGKVYALNATDGSIVWTYAMGKSVESSPTIDAN--DNSLFVG- 279
Query: 136 SSLEEALPADQCCTFRGSLAKLDVRNGRIIW 166
AD G +A LD R+G W
Sbjct: 280 --------ADN-----GKVACLDTRDGTEKW 297
Score = 38.1 bits (87), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 54/106 (50%), Gaps = 9/106 (8%)
Query: 32 WSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTGLSGTGIVVNV 91
W++ AG I ++PA+ N ++YF + +G + AVN +G +W+ + + +VN
Sbjct: 55 WTYNAGSAIESSPAIINKIIYFGTKDGDVNAVNLEDGTNLWDYKTGG--AIISSPAIVND 112
Query: 92 TVAV------VVAVSRSNGELVWSTQIDPRPRSQITMS-GSVYMGA 130
T+ + + A +NG++ W + S + G+VY+G+
Sbjct: 113 TLYIGSTDGYLYAQDTTNGDVKWKYKTGNSIESSPAVDGGNVYIGS 158
>gi|258543271|ref|YP_003188704.1| alcohol dehydrogenase large subunit [Acetobacter pasteurianus IFO
3283-01]
gi|384043191|ref|YP_005481935.1| alcohol dehydrogenase large subunit [Acetobacter pasteurianus IFO
3283-12]
gi|384051708|ref|YP_005478771.1| alcohol dehydrogenase large subunit [Acetobacter pasteurianus IFO
3283-03]
gi|384054815|ref|YP_005487909.1| alcohol dehydrogenase large subunit [Acetobacter pasteurianus IFO
3283-07]
gi|384058050|ref|YP_005490717.1| alcohol dehydrogenase large subunit [Acetobacter pasteurianus IFO
3283-22]
gi|384060691|ref|YP_005499819.1| alcohol dehydrogenase large subunit [Acetobacter pasteurianus IFO
3283-26]
gi|384063983|ref|YP_005484625.1| alcohol dehydrogenase large subunit [Acetobacter pasteurianus IFO
3283-32]
gi|384119994|ref|YP_005502618.1| alcohol dehydrogenase large subunit [Acetobacter pasteurianus IFO
3283-01-42C]
gi|256634349|dbj|BAI00325.1| alcohol dehydrogenase large subunit [Acetobacter pasteurianus IFO
3283-01]
gi|256637407|dbj|BAI03376.1| alcohol dehydrogenase large subunit [Acetobacter pasteurianus IFO
3283-03]
gi|256640459|dbj|BAI06421.1| alcohol dehydrogenase large subunit [Acetobacter pasteurianus IFO
3283-07]
gi|256643516|dbj|BAI09471.1| alcohol dehydrogenase large subunit [Acetobacter pasteurianus IFO
3283-22]
gi|256646571|dbj|BAI12519.1| alcohol dehydrogenase large subunit [Acetobacter pasteurianus IFO
3283-26]
gi|256649624|dbj|BAI15565.1| alcohol dehydrogenase large subunit [Acetobacter pasteurianus IFO
3283-32]
gi|256652612|dbj|BAI18546.1| alcohol dehydrogenase large subunit [Acetobacter pasteurianus IFO
3283-01-42C]
gi|256655668|dbj|BAI21595.1| alcohol dehydrogenase large subunit [Acetobacter pasteurianus IFO
3283-12]
Length = 711
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 75/359 (20%), Positives = 130/359 (36%), Gaps = 80/359 (22%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRW--SFYAGKDISATPAVANGVVYFPSWNG 58
W +G +RY+ I V+NL L W + ATP V +GV+Y +
Sbjct: 41 WPTYGRTYAEQRYS-PLAQITDHNVQNLHLAWYQDLDTNRGQEATPLVIDGVMYISTNWS 99
Query: 59 YLYAVNAFNGALIWEQNLSKLTG---LSGTGIVVNVTVAV-------------VVAVSRS 102
++ A++A G L+W+ + K+ G + G VN VA ++A+
Sbjct: 100 HVEALDAATGHLLWKYD-PKVPGNVAVKGCCDTVNRGVAYWQGRIYVGTFDGRLIALDAK 158
Query: 103 NGELVWSTQIDPRPRS-----QITMSGS--VYMGAFYVGLSSLEEALPADQCCTFRGSLA 155
G +VWS P + T+ G+ + G +G E RG ++
Sbjct: 159 TGHVVWSVHTIPHDATLGDIRSYTVDGAPRIVKGIVIIGNGGAEFGA--------RGFVS 210
Query: 156 KLDVRNGRIIWQTYMLPDNGGK--------------------RGGYS----GAAVWGS-- 189
D + G + W+ + +P K +G ++ G VW S
Sbjct: 211 GFDAKTGALRWRFFTVPAPSNKPDHAASDKALHDIAYPTWSPKGDWTKSGGGGTVWDSIV 270
Query: 190 -SPAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYF 248
P D++ N + +++ SIVA+ ++G W D + F
Sbjct: 271 YDPKTDLVYLGVGNGAPWNYKFRSDGVGDNLFLASIVAIKPETGEYVWHFQETPKDQWDF 330
Query: 249 TCLVPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
T P M++ + G R V+V K+GF + D +G+ +
Sbjct: 331 TASQPI------------------MVMDLPIRGEQRHVIVQAPKNGFFYILDAQTGEFL 371
>gi|310817071|ref|YP_003965035.1| sorbose dehydrogenase [Ketogulonicigenium vulgare Y25]
gi|308755806|gb|ADO43735.1| sorbose dehydrogenase [Ketogulonicigenium vulgare Y25]
Length = 578
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 73/348 (20%), Positives = 126/348 (36%), Gaps = 59/348 (16%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWS--FYAGKDISATPAVANGVVYFPSWNG 58
W+++G + N R++ I V L+L W+ GK + TP + +GV+Y +
Sbjct: 40 WISYGQNQENYRHS-PLTQITTENVGQLQLVWARGMQPGK-VQVTPLIHDGVMYLANPGD 97
Query: 59 YLYAVNAFNGALIWEQ-----NLSKLT---------GLSGTGIVVNVTVAVVVAVSRSNG 104
+ A++A G LIWE N++ L L GT + +VA+ G
Sbjct: 98 VIQAIDAKTGDLIWEHRRQLPNIATLNSFGEPTRGMALYGTNVYFVSWDNHLVALDMGTG 157
Query: 105 ELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRI 164
++V+ SG + V S+ Q F ++ D G
Sbjct: 158 QVVFDVDRGQGDERVSNSSGPIVANGTIVAGSTC-------QYSPFGCFVSGHDSATGEE 210
Query: 165 IWQTYMLPDNGGKRGGYSGAAVWGSS----------------PAIDVIRRQKQNNQTTKP 208
+W+ Y +P R G G WG+ P +++
Sbjct: 211 LWRNYFIP-----RAGEEGDETWGNDYESRWMTGAWGQITYDPVTNLVHYGSTAVGPASE 265
Query: 209 THPDQCISSDIYANSIVALDIDSGRIAWAK---PLGGYDIFYFTCLVPNNPDCPPGPNLD 265
T + N+ A+ D+G I W P +D ++ N D P ++
Sbjct: 266 TQRGTPGGTLYGTNTRFAVRPDTGEIVWRHQTLPRDNWDQECTFEMMVTNVDVQPSTEME 325
Query: 266 ADFGEAPMLLTISTN---GRFRDVVVAVQKSGFAWAFDRDSGDIIWFK 310
L +I+ N G R + K+G W FD ++G+ +W +
Sbjct: 326 G-------LQSINPNAATGERRVLTGVPCKTGTMWQFDAETGEFLWAR 366
>gi|408481119|ref|ZP_11187338.1| quinoprotein ethanol dehydrogenase PedH [Pseudomonas sp. R81]
Length = 591
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 72/351 (20%), Positives = 132/351 (37%), Gaps = 75/351 (21%)
Query: 2 LNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAG----KDISATPAVANGVVYFPSWN 57
+ +G + +RY+ + L N V+ LR W+F G + A P + +GV+Y
Sbjct: 45 VTNGLGVQGQRYSPLDTL-NVDNVKELRPVWAFSFGGEKQRGQQAQPMIKDGVMYLTGSY 103
Query: 58 GYLYAVNAFNGALIWEQN-------------LSKLTGLSGTGIVVNVTVAVVVAVSRSNG 104
++AV+A G +W+ + +++ L G + A +VA+++ G
Sbjct: 104 SRVFAVDARTGKKLWQYDARLPDDIRPCCDVINRGVALYGDLVFFGTLDAKLVALNKDTG 163
Query: 105 ELVWSTQI-DPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGR 163
++VWS ++ D + I+ + V G G++ E + G + D +NG
Sbjct: 164 KVVWSKKVADHKEGYSISAAPLVINGKLITGVAGGEFGV--------VGKIEAYDPKNGE 215
Query: 164 IIWQT--------YMLPDNGGKRGGYSGAA--------VW---GSSPAIDVIRRQKQN-- 202
++W Y+ D G SG +W G++P + + N
Sbjct: 216 LLWSRPTVEGHMGYVYKDGKAVENGISGGEAGKTWPGDLWKTGGAAPWLGGYYDPETNLL 275
Query: 203 ---NQTTKPTHPDQCISSDIYANSIVALDIDSGRIAW---AKPLGGYDIFYFTCLVPNNP 256
P + ++Y++S +AL+ D G I W P G+D LV N
Sbjct: 276 LFGTGNPAPWNSHLRPGDNLYSSSRLALNPDDGTIKWHFQTTPHDGWDYDGVNELVSFN- 334
Query: 257 DCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
+ G+ ++GF + DR +G I
Sbjct: 335 --------------------YTEGGKEIKAAATADRNGFFYVLDRTNGKFI 365
>gi|399001134|ref|ZP_10703852.1| PQQ-dependent dehydrogenase, methanol/ethanol family [Pseudomonas
sp. GM18]
gi|398128327|gb|EJM17718.1| PQQ-dependent dehydrogenase, methanol/ethanol family [Pseudomonas
sp. GM18]
Length = 591
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 72/351 (20%), Positives = 135/351 (38%), Gaps = 75/351 (21%)
Query: 2 LNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAG----KDISATPAVANGVVYFPSWN 57
+ +G + +RY+ + L N V++LR W+F G + A P + +GV+Y
Sbjct: 45 VTNGLGVQGQRYSPLDTL-NVDNVKDLRPVWAFSFGGEKQRGQQAQPMIKDGVMYMTGSY 103
Query: 58 GYLYAVNAFNGALIWEQN-------------LSKLTGLSGTGIVVNVTVAVVVAVSRSNG 104
++AV+A G +W+ + +++ L G ++ A +VA+++ G
Sbjct: 104 SRVFAVDARTGRKLWQYDARLPDDIRPCCDVINRGVALYGDLVIFGTLDAKLVALNKDTG 163
Query: 105 ELVWSTQI-DPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGR 163
++VWS ++ D + I+ + V G G++ E + G + D +NG
Sbjct: 164 KVVWSKKVADHKEGYSISAAPLVINGKLITGVAGGEFGV--------VGKIEAYDPKNGD 215
Query: 164 IIWQT--------YMLPDNGGKRGGYSGAA--------VW---GSSPAIDVIRRQKQN-- 202
++W Y+ D G SG +W G++P + + N
Sbjct: 216 LLWTRPTVEGHMGYVYKDGKAVENGISGGEAGKTWPGDLWKTGGAAPWLGGYYDPETNLL 275
Query: 203 ---NQTTKPTHPDQCISSDIYANSIVALDIDSGRIAW---AKPLGGYDIFYFTCLVPNNP 256
P + ++Y++S +AL+ D G I W + P G+D LV N
Sbjct: 276 LFGTGNPAPWNSHLRPGDNLYSSSRLALNPDDGTIKWHFQSTPHDGWDYDGVNELVSFN- 334
Query: 257 DCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
+ G+ ++GF + DR +G I
Sbjct: 335 --------------------YNEGGKEIKAAATADRNGFFYVLDRTNGKFI 365
>gi|395006305|ref|ZP_10390134.1| glucose dehydrogenase [Acidovorax sp. CF316]
gi|394315718|gb|EJE52499.1| glucose dehydrogenase [Acidovorax sp. CF316]
Length = 715
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 75/333 (22%), Positives = 125/333 (37%), Gaps = 65/333 (19%)
Query: 5 GGDLNNRRYAYGEVLINPVTVRNL------RLRWSFYAGKDISATPAVANGVVYFPSWNG 58
GG+L N+ Y+ I V NL R+ G + S T V +GV+Y S G
Sbjct: 57 GGNLGNQNYS-ALAQIGKQNVANLGGAWTNRIEGGLNTGTNQSTT-VVVDGVIYIESALG 114
Query: 59 YLYAVNAFNGALIWEQNLSKLTGLSGTGIVVNVTVAVV---------VAVSRSNGELVWS 109
+ AV+ GA W+ + ++ G+ V + +V VA+++ G + W
Sbjct: 115 NVIAVDGKTGATKWKWT-TPYGVITRRGVAVAKDLGLVYTVANGNRLVALNKDTGAVAWI 173
Query: 110 TQ-----IDPRPRSQITMSGSVYMGAFY-VGLSSLEEALPADQCCTFRGSLAKLDVRNGR 163
Q DP Y+GA V + L RG+ D NG
Sbjct: 174 KQYPTDATDPN-----------YLGAVQKVAIVYHNRRLHVGTNDGNRGAAFAADATNGN 222
Query: 164 IIWQTYMLPDNG---------GKRGGYSGAAVW---GSSPAIDVIRRQKQNNQTTKPTHP 211
++ + +P G + +GA W P ++++ N +
Sbjct: 223 VLNYFWGIPRQGERGYETWGGAEEAKRTGATPWIHPAVDPELNLVYWTFGNVRGGSSQDG 282
Query: 212 DQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEA 271
+ ++++NSIVAL++ +G W +DI+ D D +
Sbjct: 283 SERPGQNLFSNSIVALELTTGAYKWHFQSVHHDIW------------------DMDNVMS 324
Query: 272 PMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSG 304
P+L + GR R VV+ K+G + DR G
Sbjct: 325 PVLADVQIEGRERKVVIYGSKTGMYYILDRKDG 357
>gi|126732891|ref|ZP_01748681.1| putative methanol dehydrogenase protein, large subunit [Sagittula
stellata E-37]
gi|126706597|gb|EBA05672.1| putative methanol dehydrogenase protein, large subunit [Sagittula
stellata E-37]
Length = 581
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 80/357 (22%), Positives = 136/357 (38%), Gaps = 81/357 (22%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAG--KDISATPAVANGVVY----FP 54
W GD N+RY+ + IN V +L++ W+F G + +P V V+Y FP
Sbjct: 16 WAIQTGDYKNQRYSELD-QINKDNVSDLQVAWTFSTGVLRGHEGSPLVIGDVMYVHTPFP 74
Query: 55 SWNGYLYAVN-AFNGALIWE----QN-----------LSKLTGLSGTGIVVNVTVAVVVA 98
+ +YA++ G +IW+ QN +++ + I ++ VVA
Sbjct: 75 N---IVYALDLTQEGKIIWKYEPKQNPDVIPVMCCDTVNRGVAYADGKIFLHQADTKVVA 131
Query: 99 VSRSNGELVWSTQI-DPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKL 157
+ + GE+VW Q DP T + VG+S E + RGS+
Sbjct: 132 LDANTGEVVWEVQNGDPSIGETNTATVLPVKDKVIVGISGGEFGV--------RGSVTAY 183
Query: 158 DVRNGRIIWQTY---------MLPDN----GGKRGGYSGAAVWGSSP------------A 192
++ G W+ Y M P+N G G SG W +
Sbjct: 184 NMETGEQEWRAYSMGPDEDILMDPENTTNLGEPVGADSGTNTWEGDQWMIGGGTTWGWYS 243
Query: 193 IDVIRRQKQNNQTTKPT-HPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCL 251
+D+ T +P Q + ++ +I+A DIDSG W + +D + F
Sbjct: 244 VDMEENLIYYGTGNPSTWNPSQRPGDNRWSMTIMARDIDSGMAKWVYQMTPHDEWDFD-- 301
Query: 252 VPNNPDCPPGPNLDADFGEAPMLLT-ISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
G M+LT +G R ++ ++G + DR +G+++
Sbjct: 302 -----------------GVNEMILTEQEVDGEQRKLLTHFDRNGLGYTLDRVTGELL 341
>gi|374374965|ref|ZP_09632623.1| Quinoprotein glucose dehydrogenase [Niabella soli DSM 19437]
gi|373231805|gb|EHP51600.1| Quinoprotein glucose dehydrogenase [Niabella soli DSM 19437]
Length = 717
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 84/361 (23%), Positives = 130/361 (36%), Gaps = 80/361 (22%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYA-GKD------ISATPAVANGVVYF 53
W N+ G + RY+ + I+ V V L+ W F KD I P V NG++Y
Sbjct: 36 WENYAGTKDGMRYSALD-QIDTVNVTRLQEVWRFSTYDKDTMDKSQIQCNPIVVNGILYG 94
Query: 54 PSWNGYLYAVNAFNGALIWEQNLS-KLTGLSGTGIVVNVTVAV----------------- 95
S L+A++A G W + + K +G N++ V
Sbjct: 95 VSPASKLFALDAATGRPRWIFDPAGKDSGGGQKPGSFNISRGVTWWTDGGDSRIFYNAGK 154
Query: 96 -VVAVSRSNGELV-------W---STQID----PRPRSQITMSGSVYMGAFYVGLSSLEE 140
+ AV+ G L+ W S Q+ P T G +Y VG E
Sbjct: 155 KIFAVAAGTGALIKSFGHNGWIDLSEQLGRDAGANPYVVGTTPGIIYKNLLIVGSRVAET 214
Query: 141 ALPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYS---GAAVWGSSPAIDVIR 197
A A G + DVR G + W + +P G K GY + W +
Sbjct: 215 ADAAP------GDIRAYDVRTGGLRWSFHTIPHPGEK--GYETWPDTSAWKKLGGANCWA 266
Query: 198 RQKQNNQTTKPTHPDQCISSDIY----------ANSIVALDIDSGRIAWAKPLGGYDIFY 247
+ Q P ++ D Y ANSIVALD +G W +D++
Sbjct: 267 GMSVDEQRGIVYVPTGSVAGDFYGGIRKGTNLFANSIVALDAATGNYLWHYQTVHHDLW- 325
Query: 248 FTCLVPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
D D P L+T++ NG+ + + + K G+ + DR +G +
Sbjct: 326 -----------------DRDLPANPNLVTVTVNGKKTEALAQITKQGYIFLLDRTNGKPV 368
Query: 308 W 308
+
Sbjct: 369 F 369
>gi|365971616|ref|YP_004953177.1| lipoprotein YfgL [Enterobacter cloacae EcWSU1]
gi|365750529|gb|AEW74756.1| Lipoprotein yfgL [Enterobacter cloacae EcWSU1]
Length = 392
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 93/237 (39%), Gaps = 46/237 (19%)
Query: 44 PAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG--------------LSGTGIVV 89
PA A+ V+Y G + AVNA +G +W NL++ G ++G + V
Sbjct: 65 PAFADSVIYAADRKGTVKAVNADDGKEVWSVNLAEKDGWFSRKPALLSGGLTVAGGHVYV 124
Query: 90 NVTVAVVVAVSRSNGELVWSTQIDPRPRSQ-ITMSGSVYMGAFYVGLSSLEEA------- 141
A V A++ S+G + W T + S+ + G V + L +L EA
Sbjct: 125 GSEKAQVYALNTSDGSVAWQTSVAGESLSRPVVSDGMVLIHTSNGQLQALNEADGLVKWT 184
Query: 142 ----LPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYS------GAAVWGS-- 189
+P+ + RG A I+ GG G S G +W
Sbjct: 185 VNLDMPS---LSLRGESAPATAFGAAIV---------GGDNGRVSAVLMQQGQMIWQQRI 232
Query: 190 SPAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIF 246
S A + ++ T P D + + Y ++ ALD+ SG++ W + LG + F
Sbjct: 233 SQATGSTEIDRLSDVDTTPVIVDGVVYALAYNGNLTALDLRSGQVMWKRELGSVNDF 289
Score = 39.3 bits (90), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 62/131 (47%), Gaps = 19/131 (14%)
Query: 39 DISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG--LSGTGIVVNVTVAVV 96
D+ TP + +GVVY ++NG L A++ +G ++W++ L + + G I + +
Sbjct: 246 DVDTTPVIVDGVVYALAYNGNLTALDLRSGQVMWKRELGSVNDFVVDGNRIYMVDQNDRL 305
Query: 97 VAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAK 156
+A+S G +W TQ D R + + ++Y G+ VG S G +
Sbjct: 306 LALSTEGGVTLW-TQSDLLHR--LLTAPALYNGSLVVGDS--------------EGYMHW 348
Query: 157 LDVRNGRIIWQ 167
+D NGR + Q
Sbjct: 349 IDPDNGRFVAQ 359
>gi|282162676|ref|YP_003355061.1| hypothetical protein MCP_0006 [Methanocella paludicola SANAE]
gi|282154990|dbj|BAI60078.1| conserved hypothetical protein [Methanocella paludicola SANAE]
Length = 418
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 68/145 (46%), Gaps = 27/145 (18%)
Query: 29 RLRWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTGLSGTG-- 86
+ +W F A ++ +TP + NG+V+ S + +YA++ G+ IW N+S +G+S
Sbjct: 112 KEKWRFRALSNVDSTPLLMNGIVFVGSDDNRVYALDPGTGSEIW--NVSVGSGISTALED 169
Query: 87 ----IVVNVTVAVVVAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEAL 142
+ + +VA+ + G++ WST++ R S + G++Y+G
Sbjct: 170 YDNIVYAGTSDGSLVAIEPNFGKIKWSTKVGERAYSPLANDGTIYVG------------- 216
Query: 143 PADQCCTFRGSLAKLDVRNGRIIWQ 167
T+ G L +D G I W+
Sbjct: 217 ------TYDGYLVSVDQYQGSINWK 235
Score = 41.2 bits (95), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 49/109 (44%), Gaps = 7/109 (6%)
Query: 30 LRWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLS---KLTGL--SG 84
+ W AG IS+ P G +Y SW+G LY NA NG + W K L G
Sbjct: 232 INWKGQAGGAISSKPVYYGGNIYIGSWDGKLYCFNASNGRVAWTYTTYGPIKAAPLIDKG 291
Query: 85 TGIV-VNVTVAVVVAVSRSNGELVWSTQID-PRPRSQITMSGSVYMGAF 131
GI+ V + A+ +G L W Q D P + IT++ +Y ++
Sbjct: 292 KGIIYVGSGDEYLYAIDARSGGLYWKFQADSPVSSTPITVNDRLYFSSY 340
>gi|257386743|ref|YP_003176516.1| pyrrolo-quinoline quinone [Halomicrobium mukohataei DSM 12286]
gi|257169050|gb|ACV46809.1| Pyrrolo-quinoline quinone [Halomicrobium mukohataei DSM 12286]
Length = 431
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 69/140 (49%), Gaps = 15/140 (10%)
Query: 29 RLRWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTGLSGTGIV 88
R RW + G + A+PAV +G VY S++G LYA++A +G + W +N+ L + V
Sbjct: 268 RERWRYETGYWVEASPAVVDGTVYVGSFDGTLYALSAADGTVEWTRNVGDE--LESSPAV 325
Query: 89 VNVTVAV------VVAVSRSNGELVWSTQIDPRPRSQ-ITMSGSVYMGAFYVGLSSLEEA 141
V+ TV V + A+ NG W+ + R S ++ VY+G+ + +L
Sbjct: 326 VDGTVFVGSDDTKLHAIDAENGTHRWAFRTGGRVESSPAVVNERVYVGSNDGNVYALSGD 385
Query: 142 LPADQCCTFRGSLAKLDVRN 161
+D S+ +L +RN
Sbjct: 386 ARSDS------SIPELSIRN 399
Score = 45.8 bits (107), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 58/115 (50%), Gaps = 14/115 (12%)
Query: 27 NLRLRWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTGLSGTG 86
++ WSF I+++PAV +G V+ S +G LYA + +G L+W+ +++ + +
Sbjct: 59 DIGTSWSFQTDDQITSSPAVVDGTVFVGSHDGALYAFDETDGTLVWQFEMTER--VLSSP 116
Query: 87 IVVNVTVAV--------VVAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYV 133
VV+ TV V V A+ G+ VW+ + + IT S +V G YV
Sbjct: 117 AVVDGTVFVGSNGPDRAVYALDTETGDEVWNYE----ASNWITASPTVVDGHVYV 167
>gi|448567189|ref|ZP_21637277.1| PQQ enzyme repeat domain protein [Haloferax prahovense DSM 18310]
gi|445712084|gb|ELZ63867.1| PQQ enzyme repeat domain protein [Haloferax prahovense DSM 18310]
Length = 420
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 30/49 (61%)
Query: 31 RWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKL 79
RWSF AG I TPA A+G+VY S++ +LYA++A G W + L
Sbjct: 111 RWSFEAGHRIEGTPAYADGIVYIGSYDKHLYAIDAETGEERWSRAFDGL 159
Score = 38.9 bits (89), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 60/146 (41%), Gaps = 13/146 (8%)
Query: 30 LRWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTGLSGTGIVV 89
+ W+F A +P VA+ VY S + LYA++A G W + + GT
Sbjct: 70 VEWTFEADGAFWGSPIVADDTVYIGSADSSLYALDAETGEDRW--SFEAGHRIEGTPAYA 127
Query: 90 NVTVAV------VVAVSRSNGELVWSTQIDPRPRSQITM-SGSVYMGAFYVGLSSLEEAL 142
+ V + + A+ GE WS D R T+ G+VY G VG +L A
Sbjct: 128 DGIVYIGSYDKHLYAIDAETGEERWSRAFDGLIRGSPTVWDGTVYTG---VGCHNLACAW 184
Query: 143 PADQC-CTFRGSLAKLDVRNGRIIWQ 167
A++ + G + LD G W
Sbjct: 185 YAEEANVSESGWVYALDAETGETEWH 210
>gi|429101325|ref|ZP_19163299.1| Outer membrane protein YfgL, lipoprotein component of the protein
assembly complex (forms a complex with YaeT, YfiO, and
NlpB) [Cronobacter turicensis 564]
gi|426287974|emb|CCJ89412.1| Outer membrane protein YfgL, lipoprotein component of the protein
assembly complex (forms a complex with YaeT, YfiO, and
NlpB) [Cronobacter turicensis 564]
Length = 393
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 96/244 (39%), Gaps = 59/244 (24%)
Query: 44 PAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTGL---------------SGTGIV 88
PA +G VY G + AVNA +G IW +LS+ TG G +
Sbjct: 65 PAFLDGNVYAADRRGTVKAVNAQDGKEIWSIDLSEKTGFFSRNRPALLSGGLTAVGAHVY 124
Query: 89 VNVTVAVVVAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCC 148
V A V A++ S+G + W T++ S+ +S + +
Sbjct: 125 VGSEKAQVYALNTSDGSIAWQTKVAGEALSRPVVSDGLVL------------------VH 166
Query: 149 TFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYSGAAVWGSS--------PAIDVIRR-- 198
T G L L+ +G I W + + RG + A+ +G++ + +++R
Sbjct: 167 TSNGMLQALNESDGAIKWTVNLDMPSLSLRGESAPASAFGAAIVGGDNGRVSAVLMQRGQ 226
Query: 199 ---QKQNNQTTKPTHPDQCISSDI-------------YANSIVALDIDSGRIAWAKPLGG 242
Q++ +Q T T D+ D Y ++ ALD+ SG+I W + LG
Sbjct: 227 LIWQQRISQATGATEIDRLSDVDTTPVIVNGVVYALAYNGNLTALDLRSGQIMWKRELGS 286
Query: 243 YDIF 246
+ F
Sbjct: 287 VNDF 290
Score = 42.0 bits (97), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 64/155 (41%), Gaps = 26/155 (16%)
Query: 30 LRWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLS----KLTGLSGT 85
+ W + + P V++G+V + NG L A+N +GA+ W NL L G S
Sbjct: 142 IAWQTKVAGEALSRPVVSDGLVLVHTSNGMLQALNESDGAIKWTVNLDMPSLSLRGESAP 201
Query: 86 GIVVNVTVA-----VVVAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEE 140
+ V AV G+L+W +I SQ T GA + S +
Sbjct: 202 ASAFGAAIVGGDNGRVSAVLMQRGQLIWQQRI-----SQAT-------GATEIDRLSDVD 249
Query: 141 ALPAD-----QCCTFRGSLAKLDVRNGRIIWQTYM 170
P + G+L LD+R+G+I+W+ +
Sbjct: 250 TTPVIVNGVVYALAYNGNLTALDLRSGQIMWKREL 284
Score = 38.5 bits (88), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 61/132 (46%), Gaps = 21/132 (15%)
Query: 39 DISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG--LSGTGIVVNVTVAVV 96
D+ TP + NGVVY ++NG L A++ +G ++W++ L + + G I + V
Sbjct: 247 DVDTTPVIVNGVVYALAYNGNLTALDLRSGQIMWKRELGSVNDFIVDGGRIYLVDQNDNV 306
Query: 97 VAVSRSNGELVWS-TQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLA 155
+A++ G +W+ TQ+ R + + Y G+ VG S G L
Sbjct: 307 LALNVEGGVTLWTQTQLLHRNLTAPVL----YNGSLVVGDS--------------EGYLH 348
Query: 156 KLDVRNGRIIWQ 167
+D NGR + Q
Sbjct: 349 WMDTDNGRFVAQ 360
>gi|401677592|ref|ZP_10809566.1| outer membrane biogenesis protein BamB [Enterobacter sp. SST3]
gi|400215115|gb|EJO46027.1| outer membrane biogenesis protein BamB [Enterobacter sp. SST3]
Length = 392
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 94/237 (39%), Gaps = 46/237 (19%)
Query: 44 PAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG--------------LSGTGIVV 89
PA A+ VVY G + AVNA +G +W NL++ G ++G + V
Sbjct: 65 PAYADSVVYAADRKGTVKAVNADDGKEVWSVNLAEKDGWFSRKPALLSGGLTVAGGHVYV 124
Query: 90 NVTVAVVVAVSRSNGELVWSTQIDPRPRSQITMS-GSVYMGAFYVGLSSLEEA------- 141
A V A++ S+G + W T + S+ +S G V + L +L EA
Sbjct: 125 GSEKAQVYALNSSDGSIAWQTTVAGESLSRPVVSDGLVLIHTSNGQLQALNEADGLVKWT 184
Query: 142 ----LPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYS------GAAVWGS-- 189
+PA + RG A I+ GG G S G +W
Sbjct: 185 VNLDMPA---LSLRGESAPATAFGAAIV---------GGDNGRVSAVLMQQGQMIWQQRI 232
Query: 190 SPAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIF 246
S A + ++ T P + + + Y ++ ALD+ SG+I W + LG + F
Sbjct: 233 SQATGSTEIDRLSDVDTTPVIVNGVVYALAYNGNLTALDLRSGQIMWKRELGSVNDF 289
Score = 41.6 bits (96), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 62/131 (47%), Gaps = 19/131 (14%)
Query: 39 DISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG--LSGTGIVVNVTVAVV 96
D+ TP + NGVVY ++NG L A++ +G ++W++ L + + G I + +
Sbjct: 246 DVDTTPVIVNGVVYALAYNGNLTALDLRSGQIMWKRELGSVNDFIVEGNRIYMVDQNDRL 305
Query: 97 VAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAK 156
+A+S G +W TQ D R + + ++Y G+ VG S G +
Sbjct: 306 LALSTEGGVTLW-TQSDLLHR--LLTAPALYNGSLVVGDS--------------EGYMHW 348
Query: 157 LDVRNGRIIWQ 167
+D NGR + Q
Sbjct: 349 IDPDNGRFVAQ 359
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 64/153 (41%), Gaps = 35/153 (22%)
Query: 36 AGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLS----KLTGLSGTGIVVNV 91
AG+ +S P V++G+V + NG L A+N +G + W NL L G S
Sbjct: 148 AGESLS-RPVVSDGLVLIHTSNGQLQALNEADGLVKWTVNLDMPALSLRGESAPATAFGA 206
Query: 92 TVA-----VVVAVSRSNGELVW---------STQIDPRPRSQITMSGSVYMGAFYVGLSS 137
+ V AV G+++W ST+ID S + + + G Y
Sbjct: 207 AIVGGDNGRVSAVLMQQGQMIWQQRISQATGSTEID--RLSDVDTTPVIVNGVVY----- 259
Query: 138 LEEALPADQCCTFRGSLAKLDVRNGRIIWQTYM 170
+ G+L LD+R+G+I+W+ +
Sbjct: 260 ---------ALAYNGNLTALDLRSGQIMWKREL 283
>gi|407362188|ref|ZP_11108720.1| quinoprotein ethanol dehydrogenase PedH [Pseudomonas mandelii JR-1]
Length = 592
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 72/351 (20%), Positives = 133/351 (37%), Gaps = 75/351 (21%)
Query: 2 LNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAG----KDISATPAVANGVVYFPSWN 57
+ +G + +RY+ + L N V++LR W+F G + A P + +GV+Y
Sbjct: 45 VTNGLGVQGQRYSPLDTL-NVSNVKDLRPVWAFSFGGEKQRGQQAQPMIKDGVMYMTGSY 103
Query: 58 GYLYAVNAFNGALIWEQN-------------LSKLTGLSGTGIVVNVTVAVVVAVSRSNG 104
++AV+A G +W+ + +++ L G + A +VA+++ G
Sbjct: 104 SRVFAVDARTGKKLWQYDARLPDDIRPCCDVINRGVALYGDLVFFGTLDAKLVALNKDTG 163
Query: 105 ELVWSTQI-DPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGR 163
++VWS ++ D + I+ + V G G++ E + G + D +NG
Sbjct: 164 KVVWSKKVADHKEGYSISAAPLVINGKLITGVAGGEFGV--------VGKIEAYDPKNGD 215
Query: 164 IIWQT--------YMLPDNGGKRGGYSGAA--------VW---GSSPAIDVIRRQKQN-- 202
++W Y D G SG +W G++P + + N
Sbjct: 216 LLWTRPTVEGHMGYTYKDGKAVENGISGGEAGKTWPGDLWKTGGAAPWLGGYYDPETNLL 275
Query: 203 ---NQTTKPTHPDQCISSDIYANSIVALDIDSGRIAW---AKPLGGYDIFYFTCLVPNNP 256
P + ++Y++S +AL+ D G I W + P G+D LV N
Sbjct: 276 LFGTGNPAPWNSHLRPGDNLYSSSRLALNPDDGTIKWHFQSTPHDGWDYDGVNELVSFN- 334
Query: 257 DCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
+ G+ ++GF + DR +G I
Sbjct: 335 --------------------YTEGGKEIKAAATADRNGFFYVLDRTNGKFI 365
>gi|431802247|ref|YP_007229150.1| quinoprotein ethanol dehydrogenase [Pseudomonas putida HB3267]
gi|430793012|gb|AGA73207.1| putative quinoprotein ethanol dehydrogenase [Pseudomonas putida
HB3267]
Length = 586
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 67/334 (20%), Positives = 124/334 (37%), Gaps = 74/334 (22%)
Query: 19 LINPVTVRNLRLRWSFYAG----KDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQ 74
L+N V++LR W+F G + A P V +GV+Y ++AV+A G +W+
Sbjct: 53 LLNTDNVKDLRPVWAFSFGGEKQRGQQAQPLVKDGVMYLTGSYSRVFAVDARTGKKLWQY 112
Query: 75 N-------------LSKLTGLSGTGIVVNVTVAVVVAVSRSNGELVWSTQI-DPRPRSQI 120
+ +++ L G + A +VA+++ G++VWS ++ D + I
Sbjct: 113 DARLPDDIRPCCDVINRGVALYGNLVFFGTLDAKLVALNKDTGKVVWSKKVADHKEGYSI 172
Query: 121 TMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQT--------YMLP 172
+ + + G G++ E + G + + NG ++W Y+
Sbjct: 173 SAAPMIVNGKLITGVAGGEFGV--------VGKIQAYNPENGELLWMRPTVEGHMGYVYK 224
Query: 173 DNGGKRGGYSGAA--------VW---GSSPAIDVIRRQKQN-----NQTTKPTHPDQCIS 216
D G SG +W G++P + + N P +
Sbjct: 225 DGKAIENGISGGEAGKTWPGDLWKTGGAAPWLGGYYDPETNLILFGTGNPAPWNSHLRPG 284
Query: 217 SDIYANSIVALDIDSGRIAW---AKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPM 273
++Y++S +AL+ D G I W + P G+D L+ N
Sbjct: 285 ENLYSSSRLALNPDDGTIKWHFQSTPHDGWDFDGVNELISFN------------------ 326
Query: 274 LLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
G+ ++GF + DR +G I
Sbjct: 327 ---YKDGGKEVKAAATADRNGFFYVLDRTNGKFI 357
>gi|336407904|ref|ZP_08588400.1| hypothetical protein HMPREF1018_00415 [Bacteroides sp. 2_1_56FAA]
gi|335944983|gb|EGN06800.1| hypothetical protein HMPREF1018_00415 [Bacteroides sp. 2_1_56FAA]
Length = 621
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 64/297 (21%), Positives = 114/297 (38%), Gaps = 47/297 (15%)
Query: 24 TVRNLRLRWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSK----- 78
T++ R WSF +GK I TPA +G+V F S + +Y ++A G W +++
Sbjct: 324 TLKEGRKLWSFQSGKRIVGTPAATDGIVVFGSADHNIYGLDAVTGKERWRVTVAQPVLGA 383
Query: 79 LTGLSGTGIVVNVTVAVVVAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSL 138
+T G + + + A+ NG++VW+ Y G+
Sbjct: 384 VTIEKGIA-YIGGSDSTFRAIRIKNGKVVWT----------------------YTGIKGY 420
Query: 139 EEALP---ADQCC--TFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYSGAAVWGSSPAI 193
E P D+ + +L L+ NG+ +W+ G R +S AAVW +
Sbjct: 421 IETKPLVEGDKVIFGAWDNTLYALNKSNGKELWKW----TGGLTRMHFSPAAVWPVAAHG 476
Query: 194 DVIRRQKQNNQTTKPTHPDQCI--SSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCL 251
V Q T + + + + L + +I ++K + + Y T
Sbjct: 477 KVFITDPQRAMTAISLKTGKTVWRTFQSMVRETIGLSANKNQI-YSKTMNDSVVCYST-- 533
Query: 252 VPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDIIW 308
+ + P N+ + AP S D+V + K G +A D +G ++W
Sbjct: 534 ISDTPKEIWASNVGFGYEHAP-----SMQMEKDDIVFSSTKEGLIFALDASTGQVLW 585
>gi|372279443|ref|ZP_09515479.1| quinoprotein glucose dehydrogenase [Oceanicola sp. S124]
Length = 670
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 70/158 (44%), Gaps = 21/158 (13%)
Query: 152 GSLAKLDVRNGRIIWQTYMLPDNGGKRGGYSGAAVWGSSPAIDVIRRQKQNNQTTKPTHP 211
GS+ ++ ++G + W +P+ +R G A VW + A + + P +
Sbjct: 255 GSVFSVNAQSGELEWTFDTIPEEIRERTGT--ANVWTAMSADEERGIVYLPVASPSPNYY 312
Query: 212 DQCISSDI-YANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGE 270
+ DI YA S ALD+D+G + W++ +DI+ D D
Sbjct: 313 GGNRTEDIPYATSTTALDVDTGEVIWSRQWVHHDIW------------------DYDINA 354
Query: 271 APMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDIIW 308
AP L+ I+ +G ++ K GF + +R++G+ +W
Sbjct: 355 APTLMDITVDGEEIPALMQPNKMGFLFVVNRETGEDVW 392
>gi|339487139|ref|YP_004701667.1| putative quinoprotein ethanol dehydrogenase [Pseudomonas putida
S16]
gi|338837982|gb|AEJ12787.1| putative quinoprotein ethanol dehydrogenase [Pseudomonas putida
S16]
Length = 586
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 67/334 (20%), Positives = 124/334 (37%), Gaps = 74/334 (22%)
Query: 19 LINPVTVRNLRLRWSFYAG----KDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQ 74
L+N V++LR W+F G + A P V +GV+Y ++AV+A G +W+
Sbjct: 53 LLNTDNVKDLRPVWAFSFGGEKQRGQQAQPLVKDGVMYLTGSYSRVFAVDARTGKKLWQY 112
Query: 75 N-------------LSKLTGLSGTGIVVNVTVAVVVAVSRSNGELVWSTQI-DPRPRSQI 120
+ +++ L G + A +VA+++ G++VWS ++ D + I
Sbjct: 113 DARLPDDIRPCCDVINRGVALYGNLVFFGTLDAKLVALNKDTGKVVWSKKVADHKEGYSI 172
Query: 121 TMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQT--------YMLP 172
+ + + G G++ E + G + + NG ++W Y+
Sbjct: 173 SAAPMIVNGKLITGVAGGEFGV--------VGKIQAYNPENGELLWMRPTVEGHMGYVYK 224
Query: 173 DNGGKRGGYSGAA--------VW---GSSPAIDVIRRQKQN-----NQTTKPTHPDQCIS 216
D G SG +W G++P + + N P +
Sbjct: 225 DGKAIENGISGGEAGKTWPGDLWKTGGAAPWLGGYYDPETNLILFGTGNPAPWNSHLRPG 284
Query: 217 SDIYANSIVALDIDSGRIAW---AKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPM 273
++Y++S +AL+ D G I W + P G+D L+ N
Sbjct: 285 DNLYSSSRLALNPDDGTIKWHFQSTPHDGWDFDGVNELISFN------------------ 326
Query: 274 LLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
G+ ++GF + DR +G I
Sbjct: 327 ---YKDGGKEVKAAATADRNGFFYVLDRTNGKFI 357
>gi|313122571|ref|YP_004044498.1| WD40-like repeat protein [Halogeometricum borinquense DSM 11551]
gi|448285161|ref|ZP_21476409.1| WD40-like repeat protein [Halogeometricum borinquense DSM 11551]
gi|312296053|gb|ADQ69142.1| WD40-like repeat protein [Halogeometricum borinquense DSM 11551]
gi|445577379|gb|ELY31813.1| WD40-like repeat protein [Halogeometricum borinquense DSM 11551]
Length = 348
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 55/133 (41%), Gaps = 24/133 (18%)
Query: 31 RWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTGLSGTGIVVN 90
W ++A P V NG+VY P W G ++A++ NG+++W S+L S +G
Sbjct: 115 EWLVDVNARLTAPPTVNNGIVYIPDWRGRVHALSVSNGSVLW----SRLVDASESGRTFT 170
Query: 91 VTVAV---------------VVAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGL 135
VAV +VA+ + GE W+ +P +T V+ V
Sbjct: 171 EPVAVNNETLYLGSQSGTTGIVALDATTGETRWT-----KPTPAVTGGPVVHTNGIIVQS 225
Query: 136 SSLEEALPADQCC 148
L A AD C
Sbjct: 226 HHLVIAFDADGTC 238
>gi|340000238|ref|YP_004731122.1| lipoprotein [Salmonella bongori NCTC 12419]
gi|339513600|emb|CCC31354.1| putative lipoprotein [Salmonella bongori NCTC 12419]
Length = 392
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 92/243 (37%), Gaps = 58/243 (23%)
Query: 44 PAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG--------------LSGTGIVV 89
P +A+ VVY G + A+NA +G IW NL + G ++G + +
Sbjct: 65 PVMADNVVYAADRAGVVKALNADDGKEIWSVNLGEKDGWFSRSSALLSGGVTVAGGHVYI 124
Query: 90 NVTVAVVVAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCT 149
A V A++ S+G W T++ S+ +S + + T
Sbjct: 125 GSEKAEVYALNTSDGTTAWQTKVAGEALSRPVVSDGIVL------------------IHT 166
Query: 150 FRGSLAKLDVRNGRIIWQTYMLPDNGGKRG------GYSGAAVWGSSPAIDVIRR----- 198
G L L+ +G I W + + RG + A V G + + +
Sbjct: 167 SNGQLQALNQADGAIKWTVNLDMPSLSLRGESAPATAFGAAIVGGDNGRVSAVLMQQGQM 226
Query: 199 --QKQNNQTTKPTHPDQCISSDI-------------YANSIVALDIDSGRIAWAKPLGGY 243
Q++ +Q T PT D+ D Y ++ ALD+ SG+I W + LG
Sbjct: 227 IWQQRISQATGPTEIDRLSDVDTTPVVVNGVVYALAYNGNLTALDLRSGQIMWKRELGSV 286
Query: 244 DIF 246
+ F
Sbjct: 287 NDF 289
Score = 43.1 bits (100), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 61/155 (39%), Gaps = 30/155 (19%)
Query: 32 WSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLS----KLTGLSGTGI 87
W + + P V++G+V + NG L A+N +GA+ W NL L G S
Sbjct: 143 WQTKVAGEALSRPVVSDGIVLIHTSNGQLQALNQADGAIKWTVNLDMPSLSLRGESAPAT 202
Query: 88 VVNVTVA-----VVVAVSRSNGELVWSTQI-------DPRPRSQITMSGSVYMGAFYVGL 135
+ V AV G+++W +I + S + + V G Y
Sbjct: 203 AFGAAIVGGDNGRVSAVLMQQGQMIWQQRISQATGPTEIDRLSDVDTTPVVVNGVVY--- 259
Query: 136 SSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYM 170
+ G+L LD+R+G+I+W+ +
Sbjct: 260 -----------ALAYNGNLTALDLRSGQIMWKREL 283
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 61/131 (46%), Gaps = 19/131 (14%)
Query: 39 DISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG--LSGTGIVVNVTVAVV 96
D+ TP V NGVVY ++NG L A++ +G ++W++ L + + G I + V
Sbjct: 246 DVDTTPVVVNGVVYALAYNGNLTALDLRSGQIMWKRELGSVNDFIVEGDRIYLVDQNDRV 305
Query: 97 VAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAK 156
+A++ G +W TQ D R + S +Y G VG S G L
Sbjct: 306 LALTTDGGVTLW-TQSDLLHR--LLTSPVLYNGDLVVGDS--------------EGYLHW 348
Query: 157 LDVRNGRIIWQ 167
++V +GR + Q
Sbjct: 349 INVDDGRFVAQ 359
>gi|16761435|ref|NP_457052.1| outer membrane protein assembly complex subunit YfgL [Salmonella
enterica subsp. enterica serovar Typhi str. CT18]
gi|29140868|ref|NP_804210.1| outer membrane protein assembly complex subunit YfgL [Salmonella
enterica subsp. enterica serovar Typhi str. Ty2]
gi|56412601|ref|YP_149676.1| outer membrane protein assembly complex subunit YfgL [Salmonella
enterica subsp. enterica serovar Paratyphi A str. ATCC
9150]
gi|167549460|ref|ZP_02343219.1| outer membrane assembly lipoprotein YfgL [Salmonella enterica
subsp. enterica serovar Saintpaul str. SARA29]
gi|168232087|ref|ZP_02657145.1| outer membrane assembly lipoprotein YfgL [Salmonella enterica
subsp. enterica serovar Kentucky str. CDC 191]
gi|168243299|ref|ZP_02668231.1| outer membrane assembly lipoprotein YfgL [Salmonella enterica
subsp. enterica serovar Heidelberg str. SL486]
gi|168261442|ref|ZP_02683415.1| outer membrane assembly lipoprotein YfgL [Salmonella enterica
subsp. enterica serovar Hadar str. RI_05P066]
gi|168466730|ref|ZP_02700584.1| outer membrane assembly lipoprotein YfgL [Salmonella enterica
subsp. enterica serovar Newport str. SL317]
gi|168821506|ref|ZP_02833506.1| outer membrane assembly lipoprotein YfgL [Salmonella enterica
subsp. enterica serovar Weltevreden str. HI_N05-537]
gi|194444253|ref|YP_002041778.1| outer membrane protein assembly complex subunit YfgL [Salmonella
enterica subsp. enterica serovar Newport str. SL254]
gi|194449262|ref|YP_002046578.1| outer membrane protein assembly complex subunit YfgL [Salmonella
enterica subsp. enterica serovar Heidelberg str. SL476]
gi|194469826|ref|ZP_03075810.1| outer membrane assembly lipoprotein YfgL [Salmonella enterica
subsp. enterica serovar Kentucky str. CVM29188]
gi|197248832|ref|YP_002147473.1| outer membrane protein assembly complex subunit YfgL [Salmonella
enterica subsp. enterica serovar Agona str. SL483]
gi|197361536|ref|YP_002141172.1| outer membrane protein assembly complex subunit YfgL [Salmonella
enterica subsp. enterica serovar Paratyphi A str.
AKU_12601]
gi|200389214|ref|ZP_03215826.1| outer membrane assembly lipoprotein YfgL [Salmonella enterica
subsp. enterica serovar Virchow str. SL491]
gi|205353619|ref|YP_002227420.1| outer membrane protein assembly complex subunit YfgL [Salmonella
enterica subsp. enterica serovar Gallinarum str. 287/91]
gi|207857928|ref|YP_002244579.1| outer membrane protein assembly complex subunit YfgL [Salmonella
enterica subsp. enterica serovar Enteritidis str.
P125109]
gi|213161951|ref|ZP_03347661.1| outer membrane protein assembly complex subunit YfgL [Salmonella
enterica subsp. enterica serovar Typhi str. E00-7866]
gi|213418594|ref|ZP_03351660.1| outer membrane protein assembly complex subunit YfgL [Salmonella
enterica subsp. enterica serovar Typhi str. E01-6750]
gi|213425334|ref|ZP_03358084.1| outer membrane protein assembly complex subunit YfgL [Salmonella
enterica subsp. enterica serovar Typhi str. E02-1180]
gi|213581532|ref|ZP_03363358.1| outer membrane protein assembly complex subunit YfgL [Salmonella
enterica subsp. enterica serovar Typhi str. E98-0664]
gi|213649666|ref|ZP_03379719.1| outer membrane protein assembly complex subunit YfgL [Salmonella
enterica subsp. enterica serovar Typhi str. J185]
gi|213861385|ref|ZP_03385855.1| outer membrane protein assembly complex subunit YfgL [Salmonella
enterica subsp. enterica serovar Typhi str. M223]
gi|238912640|ref|ZP_04656477.1| outer membrane protein assembly complex subunit YfgL [Salmonella
enterica subsp. enterica serovar Tennessee str.
CDC07-0191]
gi|289825429|ref|ZP_06544666.1| outer membrane protein assembly complex subunit YfgL [Salmonella
enterica subsp. enterica serovar Typhi str. E98-3139]
gi|375124469|ref|ZP_09769633.1| outer membrane protein assembly complex subunit YfgL [Salmonella
enterica subsp. enterica serovar Gallinarum str. SG9]
gi|378954145|ref|YP_005211632.1| putative lipoprotein [Salmonella enterica subsp. enterica serovar
Gallinarum/pullorum str. RKS5078]
gi|378958485|ref|YP_005215971.1| hypothetical protein STBHUCCB_3660 [Salmonella enterica subsp.
enterica serovar Typhi str. P-stx-12]
gi|386592325|ref|YP_006088725.1| BamB outer membrane biogenesis protein [Salmonella enterica subsp.
enterica serovar Heidelberg str. B182]
gi|409251187|ref|YP_006886989.1| Lipoprotein yfgL Flags: Precursor [Salmonella enterica subsp.
enterica serovar Weltevreden str. 2007-60-3289-1]
gi|417328046|ref|ZP_12113292.1| Outer membrane protein Yfg [Salmonella enterica subsp. enterica
serovar Adelaide str. A4-669]
gi|417367055|ref|ZP_12139094.1| Outer membrane protein Yfg [Salmonella enterica subsp. enterica
serovar Hvittingfoss str. A4-620]
gi|417512610|ref|ZP_12176889.1| Outer membrane protein Yfg [Salmonella enterica subsp. enterica
serovar Senftenberg str. A4-543]
gi|418762274|ref|ZP_13318404.1| outer membrane protein assembly complex subunit YfgL [Salmonella
enterica subsp. enterica serovar Newport str. CVM 35185]
gi|418766903|ref|ZP_13322974.1| outer membrane protein assembly complex subunit YfgL [Salmonella
enterica subsp. enterica serovar Newport str. CVM 35199]
gi|418770290|ref|ZP_13326312.1| outer membrane protein assembly complex subunit YfgL [Salmonella
enterica subsp. enterica serovar Newport str. CVM 21539]
gi|418775722|ref|ZP_13331674.1| outer membrane protein assembly complex subunit YfgL [Salmonella
enterica subsp. enterica serovar Newport str. CVM 33953]
gi|418782853|ref|ZP_13338708.1| outer membrane protein assembly complex subunit YfgL [Salmonella
enterica subsp. enterica serovar Newport str. CVM 21559]
gi|418800823|ref|ZP_13356470.1| outer membrane protein assembly complex subunit YfgL [Salmonella
enterica subsp. enterica serovar Newport str. CVM 35202]
gi|418805478|ref|ZP_13361066.1| outer membrane protein assembly complex subunit YfgL [Salmonella
enterica subsp. enterica serovar Newport str. CVM 21550]
gi|418814205|ref|ZP_13369725.1| outer membrane protein assembly complex subunit YfgL [Salmonella
enterica subsp. enterica serovar Newport str. CVM 22513]
gi|418818902|ref|ZP_13374366.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21538]
gi|418819227|ref|ZP_13374680.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Newport str. CVM 22425]
gi|418824147|ref|ZP_13379524.1| outer membrane protein assembly complex subunit YfgL [Salmonella
enterica subsp. enterica serovar Newport str. CVM 22462]
gi|418830880|ref|ZP_13385839.1| outer membrane protein assembly complex subunit YfgL [Salmonella
enterica subsp. enterica serovar Newport str. CVM
N18486]
gi|418837565|ref|ZP_13392438.1| outer membrane protein assembly complex subunit YfgL [Salmonella
enterica subsp. enterica serovar Newport str. CVM N1543]
gi|418841935|ref|ZP_13396749.1| outer membrane protein assembly complex subunit YfgL [Salmonella
enterica subsp. enterica serovar Newport str. CVM 21554]
gi|418843039|ref|ZP_13397843.1| outer membrane protein assembly complex subunit YfgL [Salmonella
enterica subsp. enterica serovar Newport str. CVM 19443]
gi|418850331|ref|ZP_13405048.1| outer membrane protein assembly complex subunit YfgL [Salmonella
enterica subsp. enterica serovar Newport str. CVM 37978]
gi|418855644|ref|ZP_13410297.1| outer membrane protein assembly complex subunit YfgL [Salmonella
enterica subsp. enterica serovar Newport str. CVM 19593]
gi|418859506|ref|ZP_13414109.1| outer membrane protein assembly complex subunit YfgL [Salmonella
enterica subsp. enterica serovar Newport str. CVM 19470]
gi|418861737|ref|ZP_13416289.1| outer membrane protein assembly complex subunit YfgL [Salmonella
enterica subsp. enterica serovar Newport str. CVM 19536]
gi|418867647|ref|ZP_13422101.1| outer membrane protein assembly complex subunit YfgL [Salmonella
enterica subsp. enterica serovar Newport str. CVM 4176]
gi|419729192|ref|ZP_14256152.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41579]
gi|419735247|ref|ZP_14262130.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41563]
gi|419737757|ref|ZP_14264528.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41573]
gi|419742610|ref|ZP_14269282.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41566]
gi|419751220|ref|ZP_14277644.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41565]
gi|419787821|ref|ZP_14313526.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Newport str. Levine 1]
gi|419795426|ref|ZP_14321025.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Newport str. Levine 15]
gi|421357051|ref|ZP_15807364.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. 622731-39]
gi|421361379|ref|ZP_15811643.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. 639016-6]
gi|421367132|ref|ZP_15817333.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. 640631]
gi|421372688|ref|ZP_15822836.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. 77-0424]
gi|421375734|ref|ZP_15825846.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607307-6]
gi|421381050|ref|ZP_15831106.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. 485549-17]
gi|421383732|ref|ZP_15833763.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. 596866-22]
gi|421388657|ref|ZP_15838645.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. 596866-70]
gi|421396294|ref|ZP_15846225.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. 629164-26]
gi|421401585|ref|ZP_15851460.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. 629164-37]
gi|421402013|ref|ZP_15851877.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. 639672-46]
gi|421408910|ref|ZP_15858707.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. 639672-50]
gi|421413714|ref|ZP_15863466.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. 77-1427]
gi|421415478|ref|ZP_15865204.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. 77-2659]
gi|421423615|ref|ZP_15873270.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. 78-1757]
gi|421424837|ref|ZP_15874475.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. 22510-1]
gi|421429355|ref|ZP_15878952.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. 8b-1]
gi|421437189|ref|ZP_15886711.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648905 5-18]
gi|421437855|ref|ZP_15887365.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648901 6-18]
gi|421446295|ref|ZP_15895711.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. 50-3079]
gi|421449721|ref|ZP_15899103.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. 58-6482]
gi|421568822|ref|ZP_16014533.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Heidelberg str. CFSAN00322]
gi|421576401|ref|ZP_16022000.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Heidelberg str. CFSAN00325]
gi|421581142|ref|ZP_16026689.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Heidelberg str. CFSAN00326]
gi|421584184|ref|ZP_16029693.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Heidelberg str. CFSAN00328]
gi|436592282|ref|ZP_20512136.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. 22704]
gi|436802861|ref|ZP_20525560.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. CHS44]
gi|436811039|ref|ZP_20530035.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1882]
gi|436817150|ref|ZP_20534232.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1884]
gi|436845486|ref|ZP_20538813.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1594]
gi|436853351|ref|ZP_20543311.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1566]
gi|436859560|ref|ZP_20547473.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1580]
gi|436863731|ref|ZP_20550026.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1543]
gi|436868433|ref|ZP_20553193.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1441]
gi|436882801|ref|ZP_20561426.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1810]
gi|436887159|ref|ZP_20563559.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1558]
gi|436898924|ref|ZP_20570559.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1018]
gi|436901137|ref|ZP_20572061.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1010]
gi|436909408|ref|ZP_20576132.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1729]
gi|436921343|ref|ZP_20583746.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_0895]
gi|436930036|ref|ZP_20588547.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_0899]
gi|436938070|ref|ZP_20592982.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1457]
gi|436945335|ref|ZP_20597489.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1747]
gi|436949499|ref|ZP_20599480.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_0968]
gi|436960757|ref|ZP_20604394.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1444]
gi|436974660|ref|ZP_20611159.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1445]
gi|436983923|ref|ZP_20614243.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1559]
gi|436991127|ref|ZP_20617306.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1565]
gi|437007428|ref|ZP_20623281.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1808]
gi|437016653|ref|ZP_20626069.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1811]
gi|437033321|ref|ZP_20632515.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_0956]
gi|437037923|ref|ZP_20634333.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1455]
gi|437049629|ref|ZP_20640221.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1575]
gi|437054927|ref|ZP_20643227.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1725]
gi|437066400|ref|ZP_20649478.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1745]
gi|437072819|ref|ZP_20652661.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1791]
gi|437080641|ref|ZP_20657191.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1795]
gi|437088896|ref|ZP_20661801.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. 576709]
gi|437111627|ref|ZP_20668214.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. 635290-58]
gi|437118557|ref|ZP_20670391.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607308-16]
gi|437133442|ref|ZP_20678415.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607308-19]
gi|437139484|ref|ZP_20681817.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607307-2]
gi|437143576|ref|ZP_20684400.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607308-9]
gi|437149978|ref|ZP_20688488.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. 629163]
gi|437160246|ref|ZP_20694522.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. SE15-1]
gi|437172211|ref|ZP_20701009.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_N202]
gi|437180348|ref|ZP_20706071.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_56-3991]
gi|437185730|ref|ZP_20709151.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_76-3618]
gi|437206833|ref|ZP_20712559.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. 13183-1]
gi|437262194|ref|ZP_20718914.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_81-2490]
gi|437270382|ref|ZP_20723178.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. SL909]
gi|437275163|ref|ZP_20725709.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. SL913]
gi|437284181|ref|ZP_20729434.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_69-4941]
gi|437315441|ref|ZP_20737130.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. 638970-15]
gi|437330762|ref|ZP_20741789.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. 17927]
gi|437336089|ref|ZP_20742911.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. CHS4]
gi|437377379|ref|ZP_20750034.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. 22558]
gi|437420453|ref|ZP_20754627.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. 543463 22-17]
gi|437439225|ref|ZP_20757165.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. 543463 40-18]
gi|437461318|ref|ZP_20762267.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. 561362 1-1]
gi|437472197|ref|ZP_20765432.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. 642044 4-1]
gi|437489923|ref|ZP_20770705.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. 642046 4-7]
gi|437510811|ref|ZP_20776889.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648898 4-5]
gi|437524984|ref|ZP_20779551.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648899 3-17]
gi|437549556|ref|ZP_20783355.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648900 1-16]
gi|437576693|ref|ZP_20790764.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648901 1-17]
gi|437606107|ref|ZP_20799641.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648902 6-8]
gi|437613329|ref|ZP_20801513.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648903 1-6]
gi|437627608|ref|ZP_20805891.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648904 3-6]
gi|437662555|ref|ZP_20813520.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. 653049 13-19]
gi|437676518|ref|ZP_20816979.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. 642044 8-1]
gi|437695097|ref|ZP_20822067.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. 561362 9-7]
gi|437713638|ref|ZP_20827518.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. 543463 42-20]
gi|437721447|ref|ZP_20829065.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648901 16-16]
gi|437753121|ref|ZP_20834009.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. 76-2651]
gi|437814544|ref|ZP_20842366.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. 33944]
gi|438082437|ref|ZP_20857782.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. 81-2625]
gi|438100708|ref|ZP_20863975.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. 62-1976]
gi|438109161|ref|ZP_20867224.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. 53-407]
gi|438131972|ref|ZP_20873739.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Pullorum str. ATCC 9120]
gi|440765900|ref|ZP_20944911.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Agona str. SH11G1113]
gi|440766948|ref|ZP_20945934.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Agona str. SH08SF124]
gi|440773647|ref|ZP_20952540.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Agona str. SH10GFN094]
gi|445130526|ref|ZP_21381335.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Gallinarum str. 9184]
gi|445173602|ref|ZP_21396743.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. SE8a]
gi|445191688|ref|ZP_21399862.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. 20037]
gi|445232242|ref|ZP_21406013.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. SE10]
gi|445275220|ref|ZP_21410556.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. 436]
gi|445334898|ref|ZP_21415278.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. 18569]
gi|445344442|ref|ZP_21417618.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. 13-1]
gi|445361957|ref|ZP_21424020.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. PT23]
gi|25512996|pir||AG0821 probable lipoprotein STY2765 [imported] - Salmonella enterica
subsp. enterica serovar Typhi (strain CT18)
gi|16503735|emb|CAD02723.1| putative lipoprotein [Salmonella enterica subsp. enterica serovar
Typhi]
gi|29136493|gb|AAO68059.1| putative lipoprotein [Salmonella enterica subsp. enterica serovar
Typhi str. Ty2]
gi|56126858|gb|AAV76364.1| putative lipoprotein [Salmonella enterica subsp. enterica serovar
Paratyphi A str. ATCC 9150]
gi|194402916|gb|ACF63138.1| outer membrane assembly lipoprotein YfgL [Salmonella enterica
subsp. enterica serovar Newport str. SL254]
gi|194407566|gb|ACF67785.1| outer membrane assembly lipoprotein YfgL [Salmonella enterica
subsp. enterica serovar Heidelberg str. SL476]
gi|194456190|gb|EDX45029.1| outer membrane assembly lipoprotein YfgL [Salmonella enterica
subsp. enterica serovar Kentucky str. CVM29188]
gi|195630697|gb|EDX49289.1| outer membrane assembly lipoprotein YfgL [Salmonella enterica
subsp. enterica serovar Newport str. SL317]
gi|197093012|emb|CAR58445.1| putative lipoprotein [Salmonella enterica subsp. enterica serovar
Paratyphi A str. AKU_12601]
gi|197212535|gb|ACH49932.1| outer membrane assembly lipoprotein YfgL [Salmonella enterica
subsp. enterica serovar Agona str. SL483]
gi|199606312|gb|EDZ04857.1| outer membrane assembly lipoprotein YfgL [Salmonella enterica
subsp. enterica serovar Virchow str. SL491]
gi|205273400|emb|CAR38375.1| putative lipoprotein [Salmonella enterica subsp. enterica serovar
Gallinarum str. 287/91]
gi|205325300|gb|EDZ13139.1| outer membrane assembly lipoprotein YfgL [Salmonella enterica
subsp. enterica serovar Saintpaul str. SARA29]
gi|205333652|gb|EDZ20416.1| outer membrane assembly lipoprotein YfgL [Salmonella enterica
subsp. enterica serovar Kentucky str. CDC 191]
gi|205337609|gb|EDZ24373.1| outer membrane assembly lipoprotein YfgL [Salmonella enterica
subsp. enterica serovar Heidelberg str. SL486]
gi|205341971|gb|EDZ28735.1| outer membrane assembly lipoprotein YfgL [Salmonella enterica
subsp. enterica serovar Weltevreden str. HI_N05-537]
gi|205349433|gb|EDZ36064.1| outer membrane assembly lipoprotein YfgL [Salmonella enterica
subsp. enterica serovar Hadar str. RI_05P066]
gi|206709731|emb|CAR34083.1| putative lipoprotein [Salmonella enterica subsp. enterica serovar
Enteritidis str. P125109]
gi|320087015|emb|CBY96784.1| Lipoprotein yfgL Flags: Precursor [Salmonella enterica subsp.
enterica serovar Weltevreden str. 2007-60-3289-1]
gi|326628719|gb|EGE35062.1| outer membrane protein assembly complex subunit YfgL [Salmonella
enterica subsp. enterica serovar Gallinarum str. SG9]
gi|353568960|gb|EHC33693.1| Outer membrane protein Yfg [Salmonella enterica subsp. enterica
serovar Adelaide str. A4-669]
gi|353590190|gb|EHC48781.1| Outer membrane protein Yfg [Salmonella enterica subsp. enterica
serovar Hvittingfoss str. A4-620]
gi|353639312|gb|EHC84621.1| Outer membrane protein Yfg [Salmonella enterica subsp. enterica
serovar Senftenberg str. A4-543]
gi|357204756|gb|AET52802.1| putative lipoprotein [Salmonella enterica subsp. enterica serovar
Gallinarum/pullorum str. RKS5078]
gi|374352357|gb|AEZ44118.1| hypothetical protein STBHUCCB_3660 [Salmonella enterica subsp.
enterica serovar Typhi str. P-stx-12]
gi|381295398|gb|EIC36512.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41563]
gi|381297522|gb|EIC38612.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41579]
gi|381303922|gb|EIC44933.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41573]
gi|381304423|gb|EIC45407.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41565]
gi|381313539|gb|EIC54321.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41566]
gi|383799369|gb|AFH46451.1| BamB outer membrane biogenesis protein [Salmonella enterica subsp.
enterica serovar Heidelberg str. B182]
gi|392612860|gb|EIW95327.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Newport str. Levine 15]
gi|392618900|gb|EIX01288.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Newport str. Levine 1]
gi|392736213|gb|EIZ93379.1| outer membrane protein assembly complex subunit YfgL [Salmonella
enterica subsp. enterica serovar Newport str. CVM 35199]
gi|392737454|gb|EIZ94614.1| outer membrane protein assembly complex subunit YfgL [Salmonella
enterica subsp. enterica serovar Newport str. CVM 35185]
gi|392737480|gb|EIZ94638.1| outer membrane protein assembly complex subunit YfgL [Salmonella
enterica subsp. enterica serovar Newport str. CVM 21539]
gi|392747284|gb|EJA04283.1| outer membrane protein assembly complex subunit YfgL [Salmonella
enterica subsp. enterica serovar Newport str. CVM 33953]
gi|392758397|gb|EJA15264.1| outer membrane protein assembly complex subunit YfgL [Salmonella
enterica subsp. enterica serovar Newport str. CVM 21559]
gi|392772539|gb|EJA29240.1| outer membrane protein assembly complex subunit YfgL [Salmonella
enterica subsp. enterica serovar Newport str. CVM 22513]
gi|392783231|gb|EJA39860.1| outer membrane protein assembly complex subunit YfgL [Salmonella
enterica subsp. enterica serovar Newport str. CVM 35202]
gi|392784521|gb|EJA41119.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21538]
gi|392785179|gb|EJA41760.1| outer membrane protein assembly complex subunit YfgL [Salmonella
enterica subsp. enterica serovar Newport str. CVM 21550]
gi|392795149|gb|EJA51530.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Newport str. CVM 22425]
gi|392798462|gb|EJA54735.1| outer membrane protein assembly complex subunit YfgL [Salmonella
enterica subsp. enterica serovar Newport str. CVM N1543]
gi|392800577|gb|EJA56811.1| outer membrane protein assembly complex subunit YfgL [Salmonella
enterica subsp. enterica serovar Newport str. CVM
N18486]
gi|392807685|gb|EJA63753.1| outer membrane protein assembly complex subunit YfgL [Salmonella
enterica subsp. enterica serovar Newport str. CVM 21554]
gi|392817811|gb|EJA73713.1| outer membrane protein assembly complex subunit YfgL [Salmonella
enterica subsp. enterica serovar Newport str. CVM 19443]
gi|392818944|gb|EJA74823.1| outer membrane protein assembly complex subunit YfgL [Salmonella
enterica subsp. enterica serovar Newport str. CVM 37978]
gi|392820963|gb|EJA76796.1| outer membrane protein assembly complex subunit YfgL [Salmonella
enterica subsp. enterica serovar Newport str. CVM 19593]
gi|392824625|gb|EJA80398.1| outer membrane protein assembly complex subunit YfgL [Salmonella
enterica subsp. enterica serovar Newport str. CVM 22462]
gi|392830057|gb|EJA85715.1| outer membrane protein assembly complex subunit YfgL [Salmonella
enterica subsp. enterica serovar Newport str. CVM 19470]
gi|392837962|gb|EJA93529.1| outer membrane protein assembly complex subunit YfgL [Salmonella
enterica subsp. enterica serovar Newport str. CVM 19536]
gi|392839036|gb|EJA94581.1| outer membrane protein assembly complex subunit YfgL [Salmonella
enterica subsp. enterica serovar Newport str. CVM 4176]
gi|395988764|gb|EJH97910.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. 640631]
gi|395992353|gb|EJI01471.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. 622731-39]
gi|395993382|gb|EJI02477.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. 639016-6]
gi|395999604|gb|EJI08622.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. 77-0424]
gi|396002144|gb|EJI11149.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. 485549-17]
gi|396004649|gb|EJI13631.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607307-6]
gi|396009903|gb|EJI18818.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. 629164-26]
gi|396019640|gb|EJI28492.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. 596866-70]
gi|396020969|gb|EJI29802.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. 596866-22]
gi|396021113|gb|EJI29944.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. 629164-37]
gi|396026469|gb|EJI35236.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. 639672-50]
gi|396033289|gb|EJI41999.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. 639672-46]
gi|396036336|gb|EJI44997.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. 78-1757]
gi|396038855|gb|EJI47489.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. 77-1427]
gi|396047715|gb|EJI56286.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. 77-2659]
gi|396050614|gb|EJI59137.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648905 5-18]
gi|396058919|gb|EJI67378.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. 8b-1]
gi|396059012|gb|EJI67470.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. 22510-1]
gi|396063224|gb|EJI71625.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. 50-3079]
gi|396069229|gb|EJI77569.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. 58-6482]
gi|396075028|gb|EJI83305.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648901 6-18]
gi|402518291|gb|EJW25676.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Heidelberg str. CFSAN00326]
gi|402518743|gb|EJW26115.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Heidelberg str. CFSAN00325]
gi|402529206|gb|EJW36445.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Heidelberg str. CFSAN00322]
gi|402531247|gb|EJW38459.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Heidelberg str. CFSAN00328]
gi|434941369|gb|ELL47820.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Pullorum str. ATCC 9120]
gi|434956965|gb|ELL50647.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. CHS44]
gi|434964570|gb|ELL57568.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1882]
gi|434971599|gb|ELL64102.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1884]
gi|434978455|gb|ELL70488.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1594]
gi|434978686|gb|ELL70683.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. 22704]
gi|434984080|gb|ELL75841.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1566]
gi|434987720|gb|ELL79352.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1580]
gi|434997214|gb|ELL88479.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1543]
gi|435003003|gb|ELL94042.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1810]
gi|435004115|gb|ELL95108.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1441]
gi|435011062|gb|ELM01799.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1558]
gi|435013340|gb|ELM03994.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1018]
gi|435021718|gb|ELM12086.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1010]
gi|435025437|gb|ELM15585.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_0895]
gi|435028832|gb|ELM18892.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1729]
gi|435032860|gb|ELM22783.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_0899]
gi|435034521|gb|ELM24390.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1457]
gi|435036113|gb|ELM25935.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1747]
gi|435052568|gb|ELM42059.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1444]
gi|435052663|gb|ELM42151.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1445]
gi|435053253|gb|ELM42706.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_0968]
gi|435064566|gb|ELM53693.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1559]
gi|435068650|gb|ELM57661.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1808]
gi|435068837|gb|ELM57847.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1565]
gi|435077335|gb|ELM66090.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_0956]
gi|435082635|gb|ELM71247.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1811]
gi|435087923|gb|ELM76396.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1455]
gi|435096073|gb|ELM84347.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1575]
gi|435098296|gb|ELM86539.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1745]
gi|435099275|gb|ELM87486.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1725]
gi|435109503|gb|ELM97450.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1791]
gi|435112295|gb|ELN00164.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1795]
gi|435116319|gb|ELN04065.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. 576709]
gi|435118036|gb|ELN05717.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. 635290-58]
gi|435120672|gb|ELN08237.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607308-19]
gi|435131372|gb|ELN18585.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607307-2]
gi|435132093|gb|ELN19294.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607308-16]
gi|435139661|gb|ELN26644.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607308-9]
gi|435145211|gb|ELN32035.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_N202]
gi|435147162|gb|ELN33941.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. 629163]
gi|435147663|gb|ELN34420.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. SE15-1]
gi|435149140|gb|ELN35853.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_56-3991]
gi|435159281|gb|ELN45633.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_76-3618]
gi|435162119|gb|ELN48315.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_81-2490]
gi|435171113|gb|ELN56756.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. SL909]
gi|435175086|gb|ELN60514.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. SL913]
gi|435180906|gb|ELN66006.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. 638970-15]
gi|435186168|gb|ELN71017.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_69-4941]
gi|435189372|gb|ELN74006.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. 17927]
gi|435197805|gb|ELN82061.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. CHS4]
gi|435201131|gb|ELN85063.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. 543463 22-17]
gi|435204106|gb|ELN87818.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. 22558]
gi|435206322|gb|ELN89861.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. 13183-1]
gi|435212619|gb|ELN95588.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. 543463 40-18]
gi|435220376|gb|ELO02673.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. 561362 1-1]
gi|435226429|gb|ELO08007.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. 642044 4-1]
gi|435231133|gb|ELO12391.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. 642046 4-7]
gi|435231953|gb|ELO13098.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648898 4-5]
gi|435243386|gb|ELO23652.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648901 1-17]
gi|435246739|gb|ELO26729.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648900 1-16]
gi|435248685|gb|ELO28541.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648899 3-17]
gi|435256376|gb|ELO35685.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648902 6-8]
gi|435264584|gb|ELO43496.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648903 1-6]
gi|435267466|gb|ELO46164.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. 653049 13-19]
gi|435276255|gb|ELO54267.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. 642044 8-1]
gi|435278050|gb|ELO55926.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. 561362 9-7]
gi|435285832|gb|ELO63194.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648904 3-6]
gi|435286582|gb|ELO63835.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. 543463 42-20]
gi|435294466|gb|ELO71099.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648901 16-16]
gi|435295609|gb|ELO72058.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. 33944]
gi|435311373|gb|ELO85550.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. 76-2651]
gi|435320626|gb|ELO93193.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. 81-2625]
gi|435324979|gb|ELO96872.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. 62-1976]
gi|435332738|gb|ELP03641.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. 53-407]
gi|436411107|gb|ELP09061.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Agona str. SH11G1113]
gi|436415374|gb|ELP13294.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Agona str. SH10GFN094]
gi|436421447|gb|ELP19292.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Agona str. SH08SF124]
gi|444851727|gb|ELX76813.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Gallinarum str. 9184]
gi|444859842|gb|ELX84778.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. SE8a]
gi|444862592|gb|ELX87440.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. SE10]
gi|444867876|gb|ELX92549.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. 20037]
gi|444874990|gb|ELX99222.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. 18569]
gi|444880203|gb|ELY04283.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. 13-1]
gi|444884403|gb|ELY08236.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. PT23]
gi|444887706|gb|ELY11396.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. 436]
Length = 392
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 92/243 (37%), Gaps = 58/243 (23%)
Query: 44 PAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG--------------LSGTGIVV 89
P +A+ VVY G + A+NA +G IW NL + G ++G + +
Sbjct: 65 PVMADNVVYAADRAGVVKALNADDGKEIWSVNLGEKDGWFSRSSALLSGGVTVAGGHVYI 124
Query: 90 NVTVAVVVAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCT 149
A V A++ S+G W T++ S+ +S + + T
Sbjct: 125 GSEKAEVYALNTSDGTTAWQTKVAGEALSRPVVSDGIVL------------------IHT 166
Query: 150 FRGSLAKLDVRNGRIIWQTYMLPDNGGKRG------GYSGAAVWGSSPAIDVIRR----- 198
G L L+ +G I W + + RG + A V G + + +
Sbjct: 167 SNGQLQALNQADGAIKWTVNLDMPSLSLRGESAPATAFGAAIVGGDNGRVSAVLMQQGQM 226
Query: 199 --QKQNNQTTKPTHPDQCISSDI-------------YANSIVALDIDSGRIAWAKPLGGY 243
Q++ +Q T PT D+ D Y ++ ALD+ SG+I W + LG
Sbjct: 227 IWQQRISQATGPTEIDRLSDVDTTPVVVNGVVYALAYNGNLTALDLRSGQIMWKRELGSV 286
Query: 244 DIF 246
+ F
Sbjct: 287 NDF 289
Score = 43.1 bits (100), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 61/155 (39%), Gaps = 30/155 (19%)
Query: 32 WSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLS----KLTGLSGTGI 87
W + + P V++G+V + NG L A+N +GA+ W NL L G S
Sbjct: 143 WQTKVAGEALSRPVVSDGIVLIHTSNGQLQALNQADGAIKWTVNLDMPSLSLRGESAPAT 202
Query: 88 VVNVTVA-----VVVAVSRSNGELVWSTQI-------DPRPRSQITMSGSVYMGAFYVGL 135
+ V AV G+++W +I + S + + V G Y
Sbjct: 203 AFGAAIVGGDNGRVSAVLMQQGQMIWQQRISQATGPTEIDRLSDVDTTPVVVNGVVY--- 259
Query: 136 SSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYM 170
+ G+L LD+R+G+I+W+ +
Sbjct: 260 -----------ALAYNGNLTALDLRSGQIMWKREL 283
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 64/139 (46%), Gaps = 13/139 (9%)
Query: 39 DISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG--LSGTGIVVNVTVAVV 96
D+ TP V NGVVY ++NG L A++ +G ++W++ L + + G I + V
Sbjct: 246 DVDTTPVVVNGVVYALAYNGNLTALDLRSGQIMWKRELGSVNDFIVDGDRIYLVDQNDRV 305
Query: 97 VAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSS--------LEEALPADQCC 148
+A++ G +W TQ D R + S +Y G VG S + A Q
Sbjct: 306 LALTTDGGVTLW-TQSDLLHR--LLTSPVLYNGDLVVGDSEGYLHWINVDDGRFVAQQKV 362
Query: 149 TFRGSLAKLDVRNGRIIWQ 167
G L + V +G+++ Q
Sbjct: 363 DSSGFLTEPTVADGKLLIQ 381
>gi|448310977|ref|ZP_21500754.1| outer membrane biogenesis protein BamB [Natronolimnobius
innermongolicus JCM 12255]
gi|445606902|gb|ELY60801.1| outer membrane biogenesis protein BamB [Natronolimnobius
innermongolicus JCM 12255]
Length = 540
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/136 (22%), Positives = 61/136 (44%), Gaps = 20/136 (14%)
Query: 45 AVANGVVYFPSWNGYLYAVNAFNGALIWEQN---LSKLTGLSGTGIVVNVTVAVVVAVSR 101
AV + +Y + + + A+ A +G+++WE + + + G + V+ +VA+ R
Sbjct: 93 AVTDETIYATNESAVV-ALEAADGSVVWEADDVGHASEPAVDGDSVYVSGEHGEIVALDR 151
Query: 102 SNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRN 161
++G + WS+ +DP R+ ++ Y F V G+L L+ +
Sbjct: 152 ADGSIRWSSDVDPEDRNAVSRHTVAYGAVFVV----------------VEGTLYALEADD 195
Query: 162 GRIIWQTYMLPDNGGK 177
G + WQ + D G+
Sbjct: 196 GSVRWQLDAVEDEDGE 211
>gi|334344241|ref|YP_004552793.1| alcohol dehydrogenase (acceptor) [Sphingobium chlorophenolicum L-1]
gi|334100863|gb|AEG48287.1| Alcohol dehydrogenase (acceptor) [Sphingobium chlorophenolicum L-1]
Length = 682
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 75/347 (21%), Positives = 127/347 (36%), Gaps = 66/347 (19%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAGK-DISATPAVANGVVYFPSWNGY 59
W + GGD + Y+ I V L L WS+ D P +GV+YF
Sbjct: 36 WSSFGGDDREQHYS-PLAQIGEANVAKLGLAWSYDVDSFDSYTQPLAVDGVIYFAVGLSV 94
Query: 60 LYAVNAFNGALIWEQNLS---------KLTGLSGT-------GIVVNVT-VAVVVAVSRS 102
++A++A G L+W+ + ++ GT G+V T ++AV
Sbjct: 95 VHAIDARTGKLLWQYDPDVASQPEAQWRMRAGWGTRGIAYKDGMVFTATREGRLIAVDAK 154
Query: 103 NGELVWSTQ-IDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRN 161
G+ WS + +D IT + +G AD T RG + D++
Sbjct: 155 TGKPRWSVKTLDEAEGGYITGPPWIAGDKVVIGFGG------ADYSPT-RGYVTAYDIKT 207
Query: 162 GRIIWQTYMLPDN---GGKRGGYSGAAVWGSSPAIDVIRRQKQNNQTTKPTHPDQCI--- 215
G+ W+ Y++P + G + AA + + D+
Sbjct: 208 GKKAWRWYVVPGDPAKGFENKAMEAAAKTWTGEWWKWGGGGSVWHAMAYDAKYDRLYIGT 267
Query: 216 ---------------SSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPP 260
++Y +SIVALD+ +G W ++ N+ D
Sbjct: 268 GNGFPWNIKIRSPGGGDNLYLSSIVALDVKTGEYVW----------HYQVNPENSHDWND 317
Query: 261 GPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
+++ L I GR R V++ K+GF +A DR++G I
Sbjct: 318 AMDIE--------LADIVIGGRKRSVLMHAPKNGFFYAIDRETGKFI 356
>gi|418781353|ref|ZP_13337237.1| outer membrane protein assembly complex subunit YfgL [Salmonella
enterica subsp. enterica serovar Newport str. CVM 35188]
gi|392747598|gb|EJA04594.1| outer membrane protein assembly complex subunit YfgL [Salmonella
enterica subsp. enterica serovar Newport str. CVM 35188]
Length = 392
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 92/243 (37%), Gaps = 58/243 (23%)
Query: 44 PAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG--------------LSGTGIVV 89
P +A+ VVY G + A+NA +G IW NL + G ++G + +
Sbjct: 65 PVMADNVVYAADRAGVVKALNADDGKEIWSVNLGEKDGWFSRSSALLSGGVTVAGGHVYI 124
Query: 90 NVTVAVVVAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCT 149
A V A++ S+G W T++ S+ +S + + T
Sbjct: 125 GSEKAEVYALNTSDGTTAWQTKVAGEALSRPVVSDGIVL------------------IHT 166
Query: 150 FRGSLAKLDVRNGRIIWQTYMLPDNGGKRG------GYSGAAVWGSSPAIDVIRR----- 198
G L L+ +G I W + + RG + A V G + + +
Sbjct: 167 SNGQLQALNQADGAIKWTVNLDMPSLSLRGESAPATAFGAAIVGGDNGRVSAVLMQQGQM 226
Query: 199 --QKQNNQTTKPTHPDQCISSDI-------------YANSIVALDIDSGRIAWAKPLGGY 243
Q++ +Q T PT D+ D Y ++ ALD+ SG+I W + LG
Sbjct: 227 IWQQRISQATGPTEIDRLSDVDTTPVVVNGVVYALAYNGNLTALDLRSGQIMWKRELGSV 286
Query: 244 DIF 246
+ F
Sbjct: 287 NDF 289
Score = 43.1 bits (100), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 61/155 (39%), Gaps = 30/155 (19%)
Query: 32 WSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLS----KLTGLSGTGI 87
W + + P V++G+V + NG L A+N +GA+ W NL L G S
Sbjct: 143 WQTKVAGEALSRPVVSDGIVLIHTSNGQLQALNQADGAIKWTVNLDMPSLSLRGESAPAT 202
Query: 88 VVNVTVA-----VVVAVSRSNGELVWSTQI-------DPRPRSQITMSGSVYMGAFYVGL 135
+ V AV G+++W +I + S + + V G Y
Sbjct: 203 AFGAAIVGGDNGRVSAVLMQQGQMIWQQRISQATGPTEIDRLSDVDTTPVVVNGVVY--- 259
Query: 136 SSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYM 170
+ G+L LD+R+G+I+W+ +
Sbjct: 260 -----------ALAYNGNLTALDLRSGQIMWKREL 283
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 64/139 (46%), Gaps = 13/139 (9%)
Query: 39 DISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG--LSGTGIVVNVTVAVV 96
D+ TP V NGVVY ++NG L A++ +G ++W++ L + + G I + V
Sbjct: 246 DVDTTPVVVNGVVYALAYNGNLTALDLRSGQIMWKRELGSVNDFIVDGDRIYLVDQNDRV 305
Query: 97 VAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSS--------LEEALPADQCC 148
+A++ G +W TQ D R + S +Y G VG S + A Q
Sbjct: 306 LALTTDGGVTLW-TQSDLLHR--LLTSPVLYNGDLVVGDSEGYLHWINVDDGRFVAQQKV 362
Query: 149 TFRGSLAKLDVRNGRIIWQ 167
G L + V +G+++ Q
Sbjct: 363 DSSGFLTEPTVADGKLLIQ 381
>gi|330809500|ref|YP_004353962.1| alcohol dehydrogenase [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|423697153|ref|ZP_17671643.1| quinoprotein ethanol dehydrogenase PedH [Pseudomonas fluorescens
Q8r1-96]
gi|327377608|gb|AEA68958.1| Alcohol dehydrogenase (acceptor), (Quinoprotein ethanol
dehydrogenase) [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|388004011|gb|EIK65338.1| quinoprotein ethanol dehydrogenase PedH [Pseudomonas fluorescens
Q8r1-96]
Length = 591
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 79/364 (21%), Positives = 145/364 (39%), Gaps = 63/364 (17%)
Query: 2 LNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAG----KDISATPAVANGVVYFPSWN 57
+ +G + +RY+ + L N V++LR W+F G + A P + +GV+Y
Sbjct: 45 VTNGLGVQGQRYSPLDTL-NVDNVKDLRPVWAFSFGGEKQRGQQAQPMIKDGVMYLTGSY 103
Query: 58 GYLYAVNAFNGALIWEQN-------------LSKLTGLSGTGIVVNVTVAVVVAVSRSNG 104
++AV+A G +W+ + +++ L G + A +VA+++ G
Sbjct: 104 SRVFAVDARTGKKLWQYDARLPDDIRPCCDVINRGVALYGDLVFFGTLDAKLVALNKDTG 163
Query: 105 ELVWSTQI-DPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGR 163
++VWS ++ D + I+ + V G G++ E + G ++ D +NG
Sbjct: 164 KVVWSKKVADHKEGYSISAAPLVINGKLITGVAGGEFGV--------VGQISAYDPKNGD 215
Query: 164 IIWQT--------YMLPDNGGKRGGYSGAA--------VW---GSSPAIDVIRRQKQN-- 202
++W Y+ D G SG +W G++P + + N
Sbjct: 216 LLWTRPTVEGHMGYVYKDGKAIENGISGGEAGKTWPGDLWKTGGAAPWLGGYYDPETNLL 275
Query: 203 ---NQTTKPTHPDQCISSDIYANSIVALDIDSGRIAW---AKPLGGYDIFYFTCLVPNN- 255
P + ++Y++S +AL+ D G I W + P G+D L+ N
Sbjct: 276 LFGTGNPAPWNSHLRPGDNLYSSSRLALNPDDGSIKWHFQSTPHDGWDYDGVNELISFNY 335
Query: 256 ----PDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDIIWFKL 311
D D + + TNG+F V K +A D+D G I+ +
Sbjct: 336 KEGGKDIKAAATADRN---GFFYVLDRTNGKFIRGFPFVDKITWATGLDKD-GRPIYNEA 391
Query: 312 AGPG 315
+ PG
Sbjct: 392 SRPG 395
>gi|374339806|ref|YP_005096542.1| WD40-like repeat protein [Marinitoga piezophila KA3]
gi|372101340|gb|AEX85244.1| WD40-like repeat protein [Marinitoga piezophila KA3]
Length = 1461
Score = 48.1 bits (113), Expect = 0.008, Method: Composition-based stats.
Identities = 33/97 (34%), Positives = 53/97 (54%), Gaps = 10/97 (10%)
Query: 26 RNLRLRWSFYAGKDISATPAVAN-GVVYFPSWNGYLYAVNAFNGALIWEQNL------SK 78
+N L+W F + I+A+P + N G++Y SW+GYLYAVN +G L W+ S
Sbjct: 762 KNGDLKWKFKSEDIITASPVIDNKGIIYIGSWDGYLYAVNP-DGTLKWKFKTNNSISGSP 820
Query: 79 LTGLSGTGIVVNVTVAVVVAVSRSNGELVWSTQIDPR 115
+ G SGT + + + A++R +G L W + + R
Sbjct: 821 VIGRSGT-LYIGSWDGYLYAINR-DGTLRWKYKTENR 855
Score = 47.8 bits (112), Expect = 0.011, Method: Composition-based stats.
Identities = 33/110 (30%), Positives = 56/110 (50%), Gaps = 10/110 (9%)
Query: 30 LRWSFYAGKDISATPAVA-NGVVYFPSWNGYLYAVNAFNGALIW----EQNLSKLTGL-S 83
L+W F IS +P + +G +Y SW+GYLYA+N +G L W E +S+ L +
Sbjct: 806 LKWKFKTNNSISGSPVIGRSGTLYIGSWDGYLYAINR-DGTLRWKYKTENRISQTPALDN 864
Query: 84 GTGIVVNVTVAVVVAVSRSNGELVWSTQIDPRPRSQ--ITMSGSVYMGAF 131
I + V ++ NG L WS + + +S + +G++Y+G +
Sbjct: 865 NENIYIGSEDGYVYSLD-YNGNLRWSFKTESYIKSSPVVDENGTIYIGGW 913
Score = 43.1 bits (100), Expect = 0.28, Method: Composition-based stats.
Identities = 21/48 (43%), Positives = 29/48 (60%), Gaps = 2/48 (4%)
Query: 27 NLRLRWSFYAGKDISATPAV-ANGVVYFPSWNGYLYAVNAFNGALIWE 73
N LRWSF I ++P V NG +Y W+ YLYA+N+ +G L W+
Sbjct: 883 NGNLRWSFKTESYIKSSPVVDENGTIYIGGWDNYLYAINS-DGTLKWK 929
>gi|365850687|ref|ZP_09391149.1| outer membrane assembly lipoprotein YfgL [Yokenella regensburgei
ATCC 43003]
gi|364566888|gb|EHM44566.1| outer membrane assembly lipoprotein YfgL [Yokenella regensburgei
ATCC 43003]
Length = 392
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 91/243 (37%), Gaps = 58/243 (23%)
Query: 44 PAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG--------------LSGTGIVV 89
PA A+ VVY G + A+N +G +W NL++ G +SG + V
Sbjct: 65 PAYADNVVYAADRKGTVKAMNLGDGKEVWSVNLAEKDGWFSHAPALLSGGLTVSGGHVYV 124
Query: 90 NVTVAVVVAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCT 149
A V A++ S+G + W T + S+ +S + + T
Sbjct: 125 GSEKAKVYALNTSDGTVAWQTTVAGEAMSRPVISDGMVI------------------VHT 166
Query: 150 FRGSLAKLDVRNGRIIWQTYMLPDNGGKRG------GYSGAAVWGSSPAIDVIRRQKQN- 202
G L L+ +G + W + + RG Y A V G + + + Q+
Sbjct: 167 SNGLLQALNESDGAVKWTVNLDMPSLSLRGESAPAVAYGAAIVGGDNGRVSAVMLQQGQL 226
Query: 203 ------NQTTKPTHPDQCISSDI-------------YANSIVALDIDSGRIAWAKPLGGY 243
+Q T PT D+ D Y ++ ALD+ SG+I W + LG
Sbjct: 227 IWQQRISQATGPTEIDRLSDVDTTPVIVNGVVYALAYNGNLTALDLRSGQIMWKRELGSV 286
Query: 244 DIF 246
+ F
Sbjct: 287 NDF 289
Score = 42.7 bits (99), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 61/152 (40%), Gaps = 30/152 (19%)
Query: 32 WSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLS----KLTGLSGTGI 87
W + + P +++G+V + NG L A+N +GA+ W NL L G S +
Sbjct: 143 WQTTVAGEAMSRPVISDGMVIVHTSNGLLQALNESDGAVKWTVNLDMPSLSLRGESAPAV 202
Query: 88 VVNVTVA-----VVVAVSRSNGELVWSTQI-------DPRPRSQITMSGSVYMGAFYVGL 135
+ V AV G+L+W +I + S + + + G Y
Sbjct: 203 AYGAAIVGGDNGRVSAVMLQQGQLIWQQRISQATGPTEIDRLSDVDTTPVIVNGVVY--- 259
Query: 136 SSLEEALPADQCCTFRGSLAKLDVRNGRIIWQ 167
+ G+L LD+R+G+I+W+
Sbjct: 260 -----------ALAYNGNLTALDLRSGQIMWK 280
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 61/131 (46%), Gaps = 19/131 (14%)
Query: 39 DISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG--LSGTGIVVNVTVAVV 96
D+ TP + NGVVY ++NG L A++ +G ++W++ L + + G I + V
Sbjct: 246 DVDTTPVIVNGVVYALAYNGNLTALDLRSGQIMWKRELGSVNDFIVDGDRIYMVDQNDRV 305
Query: 97 VAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAK 156
+A++ G +W TQ D R + S +Y G+ VG S G +
Sbjct: 306 LALTTEGGVTLW-TQSDLLHR--LLTSPVLYNGSLVVGDS--------------EGYMHW 348
Query: 157 LDVRNGRIIWQ 167
LD +NG + Q
Sbjct: 349 LDPQNGSFVAQ 359
>gi|334133039|ref|ZP_08506794.1| PQQ-linked dehydrogenase XoxF1 [Methyloversatilis universalis FAM5]
gi|333441949|gb|EGK69921.1| PQQ-linked dehydrogenase XoxF1 [Methyloversatilis universalis FAM5]
Length = 600
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 67/359 (18%), Positives = 133/359 (37%), Gaps = 82/359 (22%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAG--KDISATPAVANGVVYFPS-WN 57
W G+ N+RY+ IN V+N+++ W+F G + P V ++ S +
Sbjct: 37 WAMQAGNFENQRYSNLN-QINKSNVKNMKVAWTFSTGVLRGHEGGPLVIGDTLFVHSPFP 95
Query: 58 GYLYAVNAFNGALIWE---------------QNLSKLTGLSGTGIVVNVTVAVVVAVSRS 102
++A++ + W+ +++ + + + +VA+
Sbjct: 96 NKVFAIDLETQKIKWKYEPKQDPSVIPVMCCDTVNRGLAYAEGKVFLQQADTTLVALDAK 155
Query: 103 NGELVWSTQI-DPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRN 161
G+ +W + DP+ T + ++ G+S E + RG +A D+
Sbjct: 156 TGKKLWDVKNGDPKVGGTNTNAPHIFKDKVITGISGGEFGI--------RGYVAAYDINT 207
Query: 162 GRIIWQTY-------MLPD--------NG---------------GKRGGYSGAAVWG--- 188
G+ +W+ Y ML D NG G + G WG
Sbjct: 208 GKQVWKGYSTGPDAEMLMDPEKTMTWTNGKMAPVGKDSSLKTWQGDQWKIGGGTTWGWYS 267
Query: 189 SSPAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYF 248
P +++ N T P+ Q + ++ ++ A D+D+G+ W + +D + F
Sbjct: 268 YDPQENLMYYGSGNPSTWNPS---QRPGDNKWSMTLWARDVDTGKARWVYQMTPHDEWDF 324
Query: 249 TCLVPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
+ +L + G+ R V V ++GFA+ DR SG+++
Sbjct: 325 DGI------------------NEVILADVDVKGKKRKVAVHFDRNGFAYTMDRVSGELL 365
>gi|253997137|ref|YP_003049201.1| PQQ-dependent dehydrogenase [Methylotenera mobilis JLW8]
gi|253983816|gb|ACT48674.1| PQQ-dependent dehydrogenase, methanol/ethanol family [Methylotenera
mobilis JLW8]
Length = 628
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 78/374 (20%), Positives = 135/374 (36%), Gaps = 85/374 (22%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAG--KDISATPAVANGVVY----FP 54
W++ D +N Y+ IN V+N++L WSF G + P V NGV+Y FP
Sbjct: 43 WVHPRKDFSNSGYSR-LSQINKGNVKNMKLAWSFATGVNRGHEGAPLVVNGVMYVHTAFP 101
Query: 55 SWNGYLYAVNAFNGALIWE---------------QNLSKLTGLSGTGIVVNVTVAVVVAV 99
+ N Y +N N ++W N+++ G I + ++VA+
Sbjct: 102 N-NVYALDLND-NQKILWSYFPKQDPSTQALLCCDNVNRGLGYGEGKIFLQQNDGLLVAL 159
Query: 100 SRSNGELVWSTQI-DPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLD 158
G+ +W TQ+ +P+ + T + V G S E + R ++ +
Sbjct: 160 DAKTGKKLWDTQVTNPKEGASNTNAPHVIKDKVITGCSGGEYGV--------RCYISAYN 211
Query: 159 VRNGRIIWQTYMLPDNGGKRGGYSGAAVWGSSPAIDVIRRQKQNNQTTKPTHPDQCISSD 218
+++G ++W+ Y G + G +P + + N K + + D
Sbjct: 212 IKDGALVWRAY---STGSDQDVLIGNDFNKDNPHYSALSLYQDVNGGNKIGGSFKALPKD 268
Query: 219 IYANSIVALDIDSGRIAWAKPLGGYD--------------------IFYFTCLVPN--NP 256
+ + D G W KP D + Y+ P+ NP
Sbjct: 269 ----QLKFPEKDLGVKTWLKPQAKKDGWQNGGGPTWGWYSYDPKLNLMYYGTGNPSTWNP 324
Query: 257 DCPPGPNL--------DADFGEAP---------------MLLTISTNGRFRDVVVAVQKS 293
D PG N D D GEA M I + + + ++
Sbjct: 325 DVRPGDNKWSMTIFARDVDTGEAKWGYQMTPHDEWDYDGMNEIILWEAKGKKLASHFDRN 384
Query: 294 GFAWAFDRDSGDII 307
GF + FDR +G ++
Sbjct: 385 GFGYTFDRTNGSLL 398
>gi|194734846|ref|YP_002115582.1| outer membrane protein assembly complex subunit YfgL [Salmonella
enterica subsp. enterica serovar Schwarzengrund str.
CVM19633]
gi|375002359|ref|ZP_09726699.1| outer membrane assembly lipoprotein YfgL [Salmonella enterica
subsp. enterica serovar Infantis str. SARB27]
gi|416426054|ref|ZP_11692673.1| outer membrane protein assembly complex subunit YfgL [Salmonella
enterica subsp. enterica serovar Montevideo str.
315996572]
gi|416431777|ref|ZP_11695879.1| outer membrane protein assembly complex subunit YfgL [Salmonella
enterica subsp. enterica serovar Montevideo str.
495297-1]
gi|416438154|ref|ZP_11699363.1| outer membrane protein assembly complex subunit YfgL [Salmonella
enterica subsp. enterica serovar Montevideo str.
495297-3]
gi|416443979|ref|ZP_11703379.1| outer membrane protein assembly complex subunit YfgL [Salmonella
enterica subsp. enterica serovar Montevideo str.
495297-4]
gi|416450742|ref|ZP_11707768.1| outer membrane protein assembly complex subunit YfgL [Salmonella
enterica subsp. enterica serovar Montevideo str.
515920-1]
gi|416460676|ref|ZP_11714936.1| outer membrane protein assembly complex subunit YfgL [Salmonella
enterica subsp. enterica serovar Montevideo str.
515920-2]
gi|416471022|ref|ZP_11719075.1| outer membrane protein assembly complex subunit YfgL [Salmonella
enterica subsp. enterica serovar Montevideo str. 531954]
gi|416481231|ref|ZP_11723215.1| outer membrane protein assembly complex subunit YfgL [Salmonella
enterica subsp. enterica serovar Montevideo str.
NC_MB110209-0054]
gi|416493198|ref|ZP_11727871.1| outer membrane protein assembly complex subunit YfgL [Salmonella
enterica subsp. enterica serovar Montevideo str.
OH_2009072675]
gi|416498360|ref|ZP_11730209.1| outer membrane protein assembly complex subunit YfgL [Salmonella
enterica subsp. enterica serovar Montevideo str.
CASC_09SCPH15965]
gi|416506710|ref|ZP_11734852.1| outer membrane protein assembly complex subunit YfgL [Salmonella
enterica subsp. enterica serovar Montevideo str. SARB31]
gi|416514793|ref|ZP_11738356.1| outer membrane protein assembly complex subunit YfgL [Salmonella
enterica subsp. enterica serovar Montevideo str. ATCC
BAA710]
gi|416530915|ref|ZP_11745329.1| outer membrane protein assembly complex subunit YfgL [Salmonella
enterica subsp. enterica serovar Montevideo str. LQC 10]
gi|416539111|ref|ZP_11749820.1| outer membrane protein assembly complex subunit YfgL [Salmonella
enterica subsp. enterica serovar Montevideo str. SARB30]
gi|416546121|ref|ZP_11753676.1| outer membrane protein assembly complex subunit YfgL [Salmonella
enterica subsp. enterica serovar Montevideo str. 19N]
gi|416552138|ref|ZP_11756867.1| outer membrane protein assembly complex subunit YfgL [Salmonella
enterica subsp. enterica serovar Montevideo str. 29N]
gi|416560910|ref|ZP_11761465.1| outer membrane protein assembly complex subunit YfgL [Salmonella
enterica subsp. enterica serovar Montevideo str. 42N]
gi|416571196|ref|ZP_11766528.1| outer membrane protein assembly complex subunit YfgL [Salmonella
enterica subsp. enterica serovar Montevideo str. 4441 H]
gi|416577261|ref|ZP_11769647.1| outer membrane protein assembly complex subunit YfgL [Salmonella
enterica subsp. enterica serovar Montevideo str.
81038-01]
gi|416583536|ref|ZP_11773349.1| outer membrane protein assembly complex subunit YfgL [Salmonella
enterica subsp. enterica serovar Montevideo str.
MD_MDA09249507]
gi|416591360|ref|ZP_11778364.1| outer membrane protein assembly complex subunit YfgL [Salmonella
enterica subsp. enterica serovar Montevideo str. 414877]
gi|416599612|ref|ZP_11783771.1| outer membrane protein assembly complex subunit YfgL [Salmonella
enterica subsp. enterica serovar Montevideo str. 366867]
gi|416603739|ref|ZP_11785600.1| outer membrane protein assembly complex subunit YfgL [Salmonella
enterica subsp. enterica serovar Montevideo str. 413180]
gi|416613824|ref|ZP_11792275.1| outer membrane protein assembly complex subunit YfgL [Salmonella
enterica subsp. enterica serovar Montevideo str. 446600]
gi|416620338|ref|ZP_11795677.1| outer membrane protein assembly complex subunit YfgL [Salmonella
enterica subsp. enterica serovar Montevideo str.
609458-1]
gi|416628622|ref|ZP_11799744.1| outer membrane protein assembly complex subunit YfgL [Salmonella
enterica subsp. enterica serovar Montevideo str.
556150-1]
gi|416637679|ref|ZP_11803584.1| outer membrane protein assembly complex subunit YfgL [Salmonella
enterica subsp. enterica serovar Montevideo str. 609460]
gi|416648948|ref|ZP_11809484.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Montevideo str. 507440-20]
gi|416662077|ref|ZP_11815737.1| outer membrane protein assembly complex subunit YfgL [Salmonella
enterica subsp. enterica serovar Montevideo str. 556152]
gi|416666830|ref|ZP_11817800.1| outer membrane protein assembly complex subunit YfgL [Salmonella
enterica subsp. enterica serovar Montevideo str.
MB101509-0077]
gi|416677349|ref|ZP_11822243.1| outer membrane protein assembly complex subunit YfgL [Salmonella
enterica subsp. enterica serovar Montevideo str.
MB102109-0047]
gi|416697130|ref|ZP_11828105.1| outer membrane protein assembly complex subunit YfgL [Salmonella
enterica subsp. enterica serovar Montevideo str.
MB110209-0055]
gi|416707771|ref|ZP_11832811.1| outer membrane protein assembly complex subunit YfgL [Salmonella
enterica subsp. enterica serovar Montevideo str.
MB111609-0052]
gi|416711421|ref|ZP_11835201.1| outer membrane protein assembly complex subunit YfgL [Salmonella
enterica subsp. enterica serovar Montevideo str.
2009083312]
gi|416720585|ref|ZP_11842219.1| outer membrane protein assembly complex subunit YfgL [Salmonella
enterica subsp. enterica serovar Montevideo str.
2009085258]
gi|416722270|ref|ZP_11843263.1| outer membrane protein assembly complex subunit YfgL [Salmonella
enterica subsp. enterica serovar Montevideo str.
315731156]
gi|416730097|ref|ZP_11848456.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2009159199]
gi|416738006|ref|ZP_11853104.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008282]
gi|416750292|ref|ZP_11859686.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008283]
gi|416753035|ref|ZP_11860670.1| outer membrane protein assembly complex subunit YfgL [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008284]
gi|416762663|ref|ZP_11866601.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008285]
gi|416770813|ref|ZP_11872143.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008287]
gi|417351007|ref|ZP_12128947.1| Outer membrane protein Yfg [Salmonella enterica subsp. enterica
serovar Gaminara str. A4-567]
gi|417359939|ref|ZP_12134183.1| Outer membrane protein Yfg [Salmonella enterica subsp. enterica
serovar Give str. S5-487]
gi|417384847|ref|ZP_12150090.1| Outer membrane protein Yfg [Salmonella enterica subsp. enterica
serovar Johannesburg str. S5-703]
gi|417469074|ref|ZP_12165510.1| Outer membrane protein Yfg [Salmonella enterica subsp. enterica
serovar Montevideo str. S5-403]
gi|418482583|ref|ZP_13051598.1| outer membrane protein assembly complex subunit YfgL [Salmonella
enterica subsp. enterica serovar Montevideo str.
80959-06]
gi|418490213|ref|ZP_13056763.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Montevideo str. CT_02035278]
gi|418493548|ref|ZP_13060012.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Montevideo str. CT_02035318]
gi|418498462|ref|ZP_13064877.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Montevideo str. CT_02035320]
gi|418504945|ref|ZP_13071297.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Montevideo str. CT_02035321]
gi|418506591|ref|ZP_13072921.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Montevideo str. CT_02035327]
gi|418512880|ref|ZP_13079116.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Pomona str. ATCC 10729]
gi|418525953|ref|ZP_13091932.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008286]
gi|194710348|gb|ACF89569.1| outer membrane assembly lipoprotein YfgL [Salmonella enterica
subsp. enterica serovar Schwarzengrund str. CVM19633]
gi|322613735|gb|EFY10674.1| outer membrane protein assembly complex subunit YfgL [Salmonella
enterica subsp. enterica serovar Montevideo str.
315996572]
gi|322619522|gb|EFY16398.1| outer membrane protein assembly complex subunit YfgL [Salmonella
enterica subsp. enterica serovar Montevideo str.
495297-1]
gi|322625027|gb|EFY21856.1| outer membrane protein assembly complex subunit YfgL [Salmonella
enterica subsp. enterica serovar Montevideo str.
495297-3]
gi|322629530|gb|EFY26306.1| outer membrane protein assembly complex subunit YfgL [Salmonella
enterica subsp. enterica serovar Montevideo str.
495297-4]
gi|322634039|gb|EFY30776.1| outer membrane protein assembly complex subunit YfgL [Salmonella
enterica subsp. enterica serovar Montevideo str.
515920-1]
gi|322635523|gb|EFY32234.1| outer membrane protein assembly complex subunit YfgL [Salmonella
enterica subsp. enterica serovar Montevideo str.
515920-2]
gi|322639801|gb|EFY36480.1| outer membrane protein assembly complex subunit YfgL [Salmonella
enterica subsp. enterica serovar Montevideo str. 531954]
gi|322644423|gb|EFY40964.1| outer membrane protein assembly complex subunit YfgL [Salmonella
enterica subsp. enterica serovar Montevideo str.
NC_MB110209-0054]
gi|322648568|gb|EFY45017.1| outer membrane protein assembly complex subunit YfgL [Salmonella
enterica subsp. enterica serovar Montevideo str.
OH_2009072675]
gi|322655212|gb|EFY51521.1| outer membrane protein assembly complex subunit YfgL [Salmonella
enterica subsp. enterica serovar Montevideo str.
CASC_09SCPH15965]
gi|322658259|gb|EFY54525.1| outer membrane protein assembly complex subunit YfgL [Salmonella
enterica subsp. enterica serovar Montevideo str. 19N]
gi|322664260|gb|EFY60457.1| outer membrane protein assembly complex subunit YfgL [Salmonella
enterica subsp. enterica serovar Montevideo str.
81038-01]
gi|322669427|gb|EFY65576.1| outer membrane protein assembly complex subunit YfgL [Salmonella
enterica subsp. enterica serovar Montevideo str.
MD_MDA09249507]
gi|322673154|gb|EFY69260.1| outer membrane protein assembly complex subunit YfgL [Salmonella
enterica subsp. enterica serovar Montevideo str. 414877]
gi|322676546|gb|EFY72614.1| outer membrane protein assembly complex subunit YfgL [Salmonella
enterica subsp. enterica serovar Montevideo str. 366867]
gi|322683296|gb|EFY79310.1| outer membrane protein assembly complex subunit YfgL [Salmonella
enterica subsp. enterica serovar Montevideo str. 413180]
gi|322685818|gb|EFY81811.1| outer membrane protein assembly complex subunit YfgL [Salmonella
enterica subsp. enterica serovar Montevideo str. 446600]
gi|323194761|gb|EFZ79949.1| outer membrane protein assembly complex subunit YfgL [Salmonella
enterica subsp. enterica serovar Montevideo str.
609458-1]
gi|323199551|gb|EFZ84642.1| outer membrane protein assembly complex subunit YfgL [Salmonella
enterica subsp. enterica serovar Montevideo str.
556150-1]
gi|323204674|gb|EFZ89672.1| outer membrane protein assembly complex subunit YfgL [Salmonella
enterica subsp. enterica serovar Montevideo str. 609460]
gi|323210154|gb|EFZ95055.1| outer membrane protein assembly complex subunit YfgL [Salmonella
enterica subsp. enterica serovar Montevideo str. 556152]
gi|323217022|gb|EGA01744.1| outer membrane protein assembly complex subunit YfgL [Salmonella
enterica subsp. enterica serovar Montevideo str.
MB101509-0077]
gi|323221820|gb|EGA06224.1| outer membrane protein assembly complex subunit YfgL [Salmonella
enterica subsp. enterica serovar Montevideo str.
MB102109-0047]
gi|323225001|gb|EGA09256.1| outer membrane protein assembly complex subunit YfgL [Salmonella
enterica subsp. enterica serovar Montevideo str.
MB110209-0055]
gi|323229290|gb|EGA13414.1| outer membrane protein assembly complex subunit YfgL [Salmonella
enterica subsp. enterica serovar Montevideo str.
MB111609-0052]
gi|323235395|gb|EGA19479.1| outer membrane protein assembly complex subunit YfgL [Salmonella
enterica subsp. enterica serovar Montevideo str.
2009083312]
gi|323237419|gb|EGA21482.1| outer membrane protein assembly complex subunit YfgL [Salmonella
enterica subsp. enterica serovar Montevideo str.
2009085258]
gi|323245173|gb|EGA29174.1| outer membrane protein assembly complex subunit YfgL [Salmonella
enterica subsp. enterica serovar Montevideo str.
315731156]
gi|323248876|gb|EGA32802.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2009159199]
gi|323253163|gb|EGA36995.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008282]
gi|323255397|gb|EGA39165.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008283]
gi|323263530|gb|EGA47057.1| outer membrane protein assembly complex subunit YfgL [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008284]
gi|323266355|gb|EGA49843.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008285]
gi|323269814|gb|EGA53264.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008287]
gi|353077047|gb|EHB42807.1| outer membrane assembly lipoprotein YfgL [Salmonella enterica
subsp. enterica serovar Infantis str. SARB27]
gi|353569496|gb|EHC34048.1| Outer membrane protein Yfg [Salmonella enterica subsp. enterica
serovar Gaminara str. A4-567]
gi|353588053|gb|EHC47198.1| Outer membrane protein Yfg [Salmonella enterica subsp. enterica
serovar Give str. S5-487]
gi|353607531|gb|EHC61383.1| Outer membrane protein Yfg [Salmonella enterica subsp. enterica
serovar Johannesburg str. S5-703]
gi|353628490|gb|EHC76533.1| Outer membrane protein Yfg [Salmonella enterica subsp. enterica
serovar Montevideo str. S5-403]
gi|363549917|gb|EHL34248.1| outer membrane protein assembly complex subunit YfgL [Salmonella
enterica subsp. enterica serovar Montevideo str. LQC 10]
gi|363554253|gb|EHL38489.1| outer membrane protein assembly complex subunit YfgL [Salmonella
enterica subsp. enterica serovar Montevideo str. SARB31]
gi|363560869|gb|EHL45000.1| outer membrane protein assembly complex subunit YfgL [Salmonella
enterica subsp. enterica serovar Montevideo str. SARB30]
gi|363564850|gb|EHL48890.1| outer membrane protein assembly complex subunit YfgL [Salmonella
enterica subsp. enterica serovar Montevideo str. ATCC
BAA710]
gi|363565046|gb|EHL49084.1| outer membrane protein assembly complex subunit YfgL [Salmonella
enterica subsp. enterica serovar Montevideo str. 29N]
gi|363574253|gb|EHL58122.1| outer membrane protein assembly complex subunit YfgL [Salmonella
enterica subsp. enterica serovar Montevideo str. 4441 H]
gi|363574439|gb|EHL58307.1| outer membrane protein assembly complex subunit YfgL [Salmonella
enterica subsp. enterica serovar Montevideo str. 42N]
gi|366063056|gb|EHN27277.1| outer membrane protein assembly complex subunit YfgL [Salmonella
enterica subsp. enterica serovar Montevideo str.
80959-06]
gi|366064126|gb|EHN28330.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Montevideo str. CT_02035318]
gi|366066559|gb|EHN30721.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Montevideo str. CT_02035278]
gi|366069331|gb|EHN33455.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Montevideo str. CT_02035321]
gi|366074239|gb|EHN38303.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Montevideo str. CT_02035320]
gi|366082650|gb|EHN46581.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Montevideo str. CT_02035327]
gi|366083092|gb|EHN47020.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Pomona str. ATCC 10729]
gi|366829127|gb|EHN56005.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Montevideo str. 507440-20]
gi|372205940|gb|EHP19445.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008286]
Length = 392
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 92/243 (37%), Gaps = 58/243 (23%)
Query: 44 PAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG--------------LSGTGIVV 89
P +A+ VVY G + A+NA +G IW NL + G ++G + +
Sbjct: 65 PVMADNVVYAADRAGVVKALNADDGKEIWSVNLGEKDGWFSRSSALLSGGVTVAGGHVYI 124
Query: 90 NVTVAVVVAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCT 149
A V A++ S+G W T++ S+ +S + + T
Sbjct: 125 GSEKAEVYALNTSDGTTAWQTKVAGEALSRPVVSDGIVL------------------IHT 166
Query: 150 FRGSLAKLDVRNGRIIWQTYMLPDNGGKRG------GYSGAAVWGSSPAIDVIRR----- 198
G L L+ +G I W + + RG + A V G + + +
Sbjct: 167 SNGQLQALNQADGAIKWTVNLDMPSLSLRGESAPATAFGAAIVGGDNGRVSAVLMQQGQM 226
Query: 199 --QKQNNQTTKPTHPDQCISSDI-------------YANSIVALDIDSGRIAWAKPLGGY 243
Q++ +Q T PT D+ D Y ++ ALD+ SG+I W + LG
Sbjct: 227 IWQQRISQATGPTEIDRLSDVDTTPVVVNGVVYALAYNGNLTALDLRSGQIMWKRELGSV 286
Query: 244 DIF 246
+ F
Sbjct: 287 NDF 289
Score = 43.1 bits (100), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 61/155 (39%), Gaps = 30/155 (19%)
Query: 32 WSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLS----KLTGLSGTGI 87
W + + P V++G+V + NG L A+N +GA+ W NL L G S
Sbjct: 143 WQTKVAGEALSRPVVSDGIVLIHTSNGQLQALNQADGAIKWTVNLDMPSLSLRGESAPAT 202
Query: 88 VVNVTVA-----VVVAVSRSNGELVWSTQI-------DPRPRSQITMSGSVYMGAFYVGL 135
+ V AV G+++W +I + S + + V G Y
Sbjct: 203 AFGAAIVGGDNGRVSAVLMQQGQMIWQQRISQATGPTEIDRLSDVDTTPVVVNGVVY--- 259
Query: 136 SSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYM 170
+ G+L LD+R+G+I+W+ +
Sbjct: 260 -----------ALAYNGNLTALDLRSGQIMWKREL 283
Score = 42.4 bits (98), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 61/131 (46%), Gaps = 19/131 (14%)
Query: 39 DISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG--LSGTGIVVNVTVAVV 96
D+ TP V NGVVY ++NG L A++ +G ++W++ L + + G I + V
Sbjct: 246 DVDTTPVVVNGVVYALAYNGNLTALDLRSGQIMWKRELGSVNDFIVDGDRIYLVDQNDRV 305
Query: 97 VAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAK 156
+A++ G +W TQ D R + S +Y G VG S G L
Sbjct: 306 LALTTDGGVTLW-TQSDLLHR--LLTSPVLYNGDLVVGDS--------------EGYLHW 348
Query: 157 LDVRNGRIIWQ 167
+DV +GR + Q
Sbjct: 349 IDVDDGRFVAQ 359
>gi|452207989|ref|YP_007488111.1| PQQ repeat protein [Natronomonas moolapensis 8.8.11]
gi|452084089|emb|CCQ37422.1| PQQ repeat protein [Natronomonas moolapensis 8.8.11]
Length = 394
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 54/113 (47%), Gaps = 5/113 (4%)
Query: 32 WSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTGLSGT----GI 87
WSF ++ TPAVA+G VY S + LYA++ +G W ++ G S T +
Sbjct: 118 WSFETDGPVTTTPAVADGTVYVGSGDERLYAIDGADGTETWRFDVGDRVGSSPTVTEEAV 177
Query: 88 VVNVTVAVVVAVSRSNGELVWSTQIDPRPRSQ-ITMSGSVYMGAFYVGLSSLE 139
V + V AV R +GE W S + G+VY+G+ + + +LE
Sbjct: 178 YVGGVNSAVFAVDRDSGERRWRFGTGASVLSTPAVVDGTVYVGSGDLNVYALE 230
Score = 44.3 bits (103), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 64/136 (47%), Gaps = 13/136 (9%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAGKDISATPAVANGVVYFPSWNGYL 60
W G D N YA G + P T + RW F I+A+PAVA +Y S +G +
Sbjct: 51 WPTFGRDAANTGYAPG--ISGPYT--EIGERWRFETDGSIAASPAVAGDTLYIGSTDGSV 106
Query: 61 YAVNAFNGALIWEQNLSKLTGLSGTGIVVNVTVAV------VVAVSRSNGELVWSTQIDP 114
YA++ + GA IW + ++ T V + TV V + A+ ++G W +
Sbjct: 107 YALDPYVGAEIW--SFETDGPVTTTPAVADGTVYVGSGDERLYAIDGADGTETWRFDVGD 164
Query: 115 RPRSQITMS-GSVYMG 129
R S T++ +VY+G
Sbjct: 165 RVGSSPTVTEEAVYVG 180
Score = 39.3 bits (90), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 51/112 (45%), Gaps = 12/112 (10%)
Query: 31 RWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTGLSGTGIVVN 90
RW F G + +TPAV +G VY S + +YA+ A +G W + +S VV+
Sbjct: 197 RWRFGTGASVLSTPAVVDGTVYVGSGDLNVYALEAVSGEERWRFGTRGI--VSAGPAVVD 254
Query: 91 VTVAV------VVAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLS 136
TV V + A+ GE W ++ QI S ++ G +VG S
Sbjct: 255 GTVYVGSRDSDLYALDAEGGEQRWQFDVN----GQIQGSPAIAGGTAFVGSS 302
>gi|417375015|ref|ZP_12144605.1| Outer membrane protein Yfg [Salmonella enterica subsp. enterica
serovar Inverness str. R8-3668]
gi|353597717|gb|EHC54349.1| Outer membrane protein Yfg [Salmonella enterica subsp. enterica
serovar Inverness str. R8-3668]
Length = 374
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 92/243 (37%), Gaps = 58/243 (23%)
Query: 44 PAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG--------------LSGTGIVV 89
P +A+ VVY G + A+NA +G IW NL + G ++G + +
Sbjct: 34 PVMADNVVYAADRAGVVKALNADDGKEIWSVNLGEKDGWFSRSSALLSGGVTVAGGHVYI 93
Query: 90 NVTVAVVVAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCT 149
A V A++ S+G W T++ S+ +S + + T
Sbjct: 94 GSEKAEVYALNTSDGTTAWQTKVAGEALSRPVVSDGIVL------------------IHT 135
Query: 150 FRGSLAKLDVRNGRIIWQTYMLPDNGGKRG------GYSGAAVWGSSPAIDVIRR----- 198
G L L+ +G I W + + RG + A V G + + +
Sbjct: 136 SNGQLQALNQADGAIKWTVNLDMPSLSLRGESAPATAFGAAIVGGDNGRVSAVLMQQGQM 195
Query: 199 --QKQNNQTTKPTHPDQCISSDI-------------YANSIVALDIDSGRIAWAKPLGGY 243
Q++ +Q T PT D+ D Y ++ ALD+ SG+I W + LG
Sbjct: 196 IWQQRISQATGPTEIDRLSDVDTTPVVVNGVVYALAYNGNLTALDLRSGQIMWKRELGSV 255
Query: 244 DIF 246
+ F
Sbjct: 256 NDF 258
Score = 43.1 bits (100), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 61/155 (39%), Gaps = 30/155 (19%)
Query: 32 WSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLS----KLTGLSGTGI 87
W + + P V++G+V + NG L A+N +GA+ W NL L G S
Sbjct: 112 WQTKVAGEALSRPVVSDGIVLIHTSNGQLQALNQADGAIKWTVNLDMPSLSLRGESAPAT 171
Query: 88 VVNVTVA-----VVVAVSRSNGELVWSTQI-------DPRPRSQITMSGSVYMGAFYVGL 135
+ V AV G+++W +I + S + + V G Y
Sbjct: 172 AFGAAIVGGDNGRVSAVLMQQGQMIWQQRISQATGPTEIDRLSDVDTTPVVVNGVVY--- 228
Query: 136 SSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYM 170
+ G+L LD+R+G+I+W+ +
Sbjct: 229 -----------ALAYNGNLTALDLRSGQIMWKREL 252
>gi|289803193|ref|ZP_06533822.1| outer membrane protein assembly complex subunit YfgL [Salmonella
enterica subsp. enterica serovar Typhi str. AG3]
Length = 295
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 91/243 (37%), Gaps = 58/243 (23%)
Query: 44 PAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG--------------LSGTGIVV 89
P +A+ VVY G + A+NA +G IW NL + G ++G + +
Sbjct: 65 PVMADNVVYAADRAGVVKALNADDGKEIWSVNLGEKDGWFSRSSALLSGGVTVAGGHVYI 124
Query: 90 NVTVAVVVAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCT 149
A V A++ S+G W T++ S+ +S + + T
Sbjct: 125 GSEKAEVYALNTSDGTTAWQTKVAGEALSRPVVSDGIVL------------------IHT 166
Query: 150 FRGSLAKLDVRNGRIIWQTYMLPDNGGKRG------GYSGAAVWGSSPAIDVIRRQKQN- 202
G L L+ +G I W + + RG + A V G + + + Q+
Sbjct: 167 SNGQLQALNQADGAIKWTVNLDMPSLSLRGESAPATAFGAAIVGGDNGRVSAVLMQQGQM 226
Query: 203 ------NQTTKPTHPDQCISSDI-------------YANSIVALDIDSGRIAWAKPLGGY 243
+Q T PT D+ D Y ++ ALD+ SG+I W + LG
Sbjct: 227 IWQQRISQATGPTEIDRLSDVDTTPVVVNGVVYALAYNGNLTALDLRSGQIMWKRELGSV 286
Query: 244 DIF 246
+ F
Sbjct: 287 NDF 289
Score = 42.7 bits (99), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 61/155 (39%), Gaps = 30/155 (19%)
Query: 32 WSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLS----KLTGLSGTGI 87
W + + P V++G+V + NG L A+N +GA+ W NL L G S
Sbjct: 143 WQTKVAGEALSRPVVSDGIVLIHTSNGQLQALNQADGAIKWTVNLDMPSLSLRGESAPAT 202
Query: 88 VVNVTVA-----VVVAVSRSNGELVWSTQI-------DPRPRSQITMSGSVYMGAFYVGL 135
+ V AV G+++W +I + S + + V G Y
Sbjct: 203 AFGAAIVGGDNGRVSAVLMQQGQMIWQQRISQATGPTEIDRLSDVDTTPVVVNGVVY--- 259
Query: 136 SSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYM 170
+ G+L LD+R+G+I+W+ +
Sbjct: 260 -----------ALAYNGNLTALDLRSGQIMWKREL 283
>gi|148261780|ref|YP_001235907.1| Pyrrolo-quinoline quinone [Acidiphilium cryptum JF-5]
gi|146403461|gb|ABQ31988.1| Pyrrolo-quinoline quinone [Acidiphilium cryptum JF-5]
Length = 557
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 69/328 (21%), Positives = 131/328 (39%), Gaps = 57/328 (17%)
Query: 9 NNRRYAYGEVLINPVTVRNLRLRWSFYAGKD--ISATPAVANGVVYFPSWNGYLYAVNAF 66
NNR G+ I P V L+ W+F+ + I A P V NG Y S + ++YA++
Sbjct: 66 NNRYVDIGQ--ITPANVAQLKPVWTFHISDNGPIEAAPVVWNGTAYITSAHDHVYAIDVK 123
Query: 67 NGALIWE--QNLSKLTGLSGTGIVV---NVTVAV----VVAVSRSNGELVW-STQIDPRP 116
G L W+ N ++ + G+ + V +A ++A++ + G+ V+ ++
Sbjct: 124 TGKLKWQFSDNPHVISFAANRGVTLLDGKVYLATLDGHLIALNATTGKKVFDKVEVSDTA 183
Query: 117 RSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNGG 176
S TM Y G + L + G++ ++ NG + W+ +P G
Sbjct: 184 NSFYTMQPLPYTNP-KTGKTVLLLGISNGDWGGI-GTIQAINPANGAVEWKYETIPGPGQ 241
Query: 177 -----------KRGGYSGAAVWGSSPAIDVIRRQKQNNQTTKPTHPD----QCISSDIYA 221
KRGG + + P ++ N Q PD S++Y+
Sbjct: 242 KGNKTWSGDSWKRGGGAVWTMMALDPKTGILYANAGNPQ------PDFNGPARKGSNLYS 295
Query: 222 NSIVALDIDSG--RIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTIST 279
+S++A++I ++ WA +D + ++P P+L T
Sbjct: 296 DSLLAINISGAKPKMVWAHQFIPHDTHDWDPVMP------------------PILFTGKV 337
Query: 280 NGRFRDVVVAVQKSGFAWAFDRDSGDII 307
+G+ +V K+G W + +G ++
Sbjct: 338 DGKEMPLVADGDKAGNFWLLNSQTGKLV 365
>gi|217978409|ref|YP_002362556.1| PQQ-dependent dehydrogenase [Methylocella silvestris BL2]
gi|217503785|gb|ACK51194.1| PQQ-dependent dehydrogenase, methanol/ethanol family [Methylocella
silvestris BL2]
Length = 601
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 79/354 (22%), Positives = 130/354 (36%), Gaps = 79/354 (22%)
Query: 3 NHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAG--KDISATPAVANGVVYFPS-WNGY 59
N D N RY+ IN TV+NL W+F G + P VA G +Y + +
Sbjct: 40 NADSDYANLRYS-SLSEINVDTVQNLAPVWTFSTGVLRGHEGAPLVAGGALYLVTPFPNR 98
Query: 60 LYAVN-AFNGALIWEQNLSKLTGLSGT---------------GIVVNVTVAVVVAVSRSN 103
+YA++ A G ++W+ + G+ I + A +VA+
Sbjct: 99 VYALDIAHEGKILWQYEPRQDAGVVAVMCCDVVSRGLAYGFGKIFLYQADATLVALDAVT 158
Query: 104 GELVWSTQI-DPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNG 162
G+ WS + DP + T + V VG++ E L RG L D G
Sbjct: 159 GKPAWSVKNGDPAKGATGTSAPIVVKDKVLVGVAGGEFGL--------RGYLTAYDAATG 210
Query: 163 RIIWQTYML-PDN-------------------------GGKRGGYSGAAVWGS---SPAI 193
IW+ Y PD+ G + G A WG P +
Sbjct: 211 AKIWRAYSTGPDSETLIDPVTTRELGRSVGAEASLKSWSGDQWALGGGAPWGRISYDPGL 270
Query: 194 DVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVP 253
+++ N T P Q + +A +I+A + D+G AW ++P
Sbjct: 271 NLVYYGTGNPSTWNPA---QRPGDNKWAMTILARNADTGEAAW-----------LYQMIP 316
Query: 254 NNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
++ D D +L + +GR R + ++GF + DR G+++
Sbjct: 317 HD-------QWDYDGVNEMILGEAAIDGRARKTLTHFDRNGFVYVLDRADGELL 363
>gi|437838918|ref|ZP_20846086.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. SARB17]
gi|435298127|gb|ELO74371.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Enteritidis str. SARB17]
Length = 392
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 92/243 (37%), Gaps = 58/243 (23%)
Query: 44 PAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG--------------LSGTGIVV 89
P +A+ VVY G + A+NA +G IW NL + G ++G + +
Sbjct: 65 PVMADNVVYAADRAGVVKALNADDGKEIWSVNLGEKDGWFSRSSALLSGGVTVAGGHVYI 124
Query: 90 NVTVAVVVAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCT 149
A V A++ S+G W T++ S+ +S + + T
Sbjct: 125 GSEKAEVYALNTSDGTTAWQTKVAGEALSRPVVSDGIVL------------------IHT 166
Query: 150 FRGSLAKLDVRNGRIIWQTYMLPDNGGKRG------GYSGAAVWGSSPAIDVIRR----- 198
G L L+ +G I W + + RG + A V G + + +
Sbjct: 167 SNGQLQALNQADGAIKWTVNLDMPSLSLRGESAPATAFGAAIVGGDNGRVSAVLMQQGQM 226
Query: 199 --QKQNNQTTKPTHPDQCISSDI-------------YANSIVALDIDSGRIAWAKPLGGY 243
Q++ +Q T PT D+ D Y ++ ALD+ SG+I W + LG
Sbjct: 227 IWQQRISQATGPTEIDRLSDVDTTPVVVNGVVYALAYNGNLTALDLRSGQIMWKRELGSV 286
Query: 244 DIF 246
+ F
Sbjct: 287 NDF 289
Score = 42.7 bits (99), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 61/155 (39%), Gaps = 30/155 (19%)
Query: 32 WSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLS----KLTGLSGTGI 87
W + + P V++G+V + NG L A+N +GA+ W NL L G S
Sbjct: 143 WQTKVAGEALSRPVVSDGIVLIHTSNGQLQALNQADGAIKWTVNLDMPSLSLRGESAPAT 202
Query: 88 VVNVTVA-----VVVAVSRSNGELVWSTQI-------DPRPRSQITMSGSVYMGAFYVGL 135
+ V AV G+++W +I + S + + V G Y
Sbjct: 203 AFGAAIVGGDNGRVSAVLMQQGQMIWQQRISQATGPTEIDRLSDVDTTPVVVNGVVY--- 259
Query: 136 SSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYM 170
+ G+L LD+R+G+I+W+ +
Sbjct: 260 -----------ALAYNGNLTALDLRSGQIMWKREL 283
Score = 39.7 bits (91), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 64/139 (46%), Gaps = 13/139 (9%)
Query: 39 DISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG--LSGTGIVVNVTVAVV 96
D+ TP V NGVVY ++NG L A++ +G ++W++ L + + G I + V
Sbjct: 246 DVDTTPVVVNGVVYALAYNGNLTALDLRSGQIMWKRELGSVNDFIVDGDRIYLVDQNDRV 305
Query: 97 VAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSS--------LEEALPADQCC 148
+A++ G +W TQ D R + S +Y G VG S + A Q
Sbjct: 306 LALTIDGGVTLW-TQSDLLHR--LLTSPVLYNGDLVVGDSEGYLHWINVDDGRFVAQQKV 362
Query: 149 TFRGSLAKLDVRNGRIIWQ 167
G L + V +G+++ Q
Sbjct: 363 DSSGFLTEPTVADGKLLIQ 381
>gi|269140142|ref|YP_003296843.1| outer membrane protein assembly complex subunit [Edwardsiella tarda
EIB202]
gi|387868663|ref|YP_005700132.1| Outer membrane protein YfgL [Edwardsiella tarda FL6-60]
gi|267985803|gb|ACY85632.1| outer membrane protein assembly complex subunit [Edwardsiella tarda
EIB202]
gi|304559976|gb|ADM42640.1| Outer membrane protein YfgL [Edwardsiella tarda FL6-60]
Length = 392
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 89/239 (37%), Gaps = 58/239 (24%)
Query: 44 PAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG--------------LSGTGIVV 89
PA + +Y G + A+NA NG +W NL + G +SG+ + V
Sbjct: 65 PAFQDNHIYAADRQGLVMAMNAENGEKLWSVNLGEKEGWFSRSDALLSGGLTVSGSKVYV 124
Query: 90 NVTVAVVVAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCT 149
AVV A++ +G + W T + S+ +S + + T
Sbjct: 125 GSEHAVVYALNSDDGSVAWKTTVAGEAISRPVVSDGLVL------------------IHT 166
Query: 150 FRGSLAKLDVRNGRIIWQTYMLPDNGGKRG------GYSGAAVWGSSPAIDVIRRQK--- 200
G L LD +G I W + + RG Y A V G + + + Q+
Sbjct: 167 SNGMLQALDESDGTIKWTISLDIPSLTLRGESAPAVAYGAAIVGGDNGRVSAVLLQQGQM 226
Query: 201 ----QNNQTTKPTHPDQCISSDI-------------YANSIVALDIDSGRIAWAKPLGG 242
+ Q T T D+ D+ Y S+ ALD+ SG+I W + +GG
Sbjct: 227 IWQQRVAQPTGATEIDRLNDIDMTPVVVDGVVYTLGYNGSLSALDLRSGQIVWKRDMGG 285
Score = 41.6 bits (96), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 67/153 (43%), Gaps = 35/153 (22%)
Query: 36 AGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLS----KLTGLSGTGIVVNV 91
AG+ IS P V++G+V + NG L A++ +G + W +L L G S +
Sbjct: 148 AGEAIS-RPVVSDGLVLIHTSNGMLQALDESDGTIKWTISLDIPSLTLRGESAPAVAYGA 206
Query: 92 TVA-----VVVAVSRSNGELVW---------STQIDPRPRSQITMSGSVYMGAFYVGLSS 137
+ V AV G+++W +T+ID + I M+ V G Y
Sbjct: 207 AIVGGDNGRVSAVLLQQGQMIWQQRVAQPTGATEID--RLNDIDMTPVVVDGVVY----- 259
Query: 138 LEEALPADQCCTFRGSLAKLDVRNGRIIWQTYM 170
+ GSL+ LD+R+G+I+W+ M
Sbjct: 260 ---------TLGYNGSLSALDLRSGQIVWKRDM 283
>gi|319791396|ref|YP_004153036.1| pqq-dependent enzyme-like protein [Variovorax paradoxus EPS]
gi|315593859|gb|ADU34925.1| PQQ-dependent enzyme-like protein [Variovorax paradoxus EPS]
Length = 741
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 78/339 (23%), Positives = 125/339 (36%), Gaps = 77/339 (22%)
Query: 5 GGDLNNRRYAYGEVLINPVTVRNLRLRW-----SFYAGKDISATPAVANGVVYFPSWNGY 59
GG+L N+ Y+ I+ V L W A + +T V +GV+Y S G
Sbjct: 82 GGNLGNQNYS-SLAKIDKAQVAKLGGAWVNQIEGGMATGNNQSTTVVVDGVIYIESALGN 140
Query: 60 LYAVNAFNGALIWEQNLSKLTGLSGTGIVVNVTVAVVVAVSRSN---------GELVWST 110
+ AV+ G W+ + ++ G+ V + +V V+ N G + W
Sbjct: 141 VIAVDGKTGLTKWKWT-TPYGSITRRGVAVAKDLGLVFTVASGNRLVALRTDTGAIAWIK 199
Query: 111 QIDPRPRSQITMSGSVYMGAFY-VGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTY 169
Q P S Y GA V L ++ L RG+ D G+++ +
Sbjct: 200 QY---PSSATDPD---YQGALQKVALVYHDKRLFLGTNDGSRGAAFSADALTGKVLTSFW 253
Query: 170 MLPDNGGKRGGYSGAAVWGSS-------------PAIDV-----------IRRQKQNNQT 205
+P R G G WG + PA+D +R N +
Sbjct: 254 GVP-----RAGEIGYDTWGGAAESDRAGATPWIHPAVDPELGLIYWTFGNVRGGSSQNGS 308
Query: 206 TKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLD 265
+P +++ANSIVALD+ +G W +DI+ D
Sbjct: 309 ARP-------GLNLFANSIVALDLKTGEYKWHFQSVHHDIW------------------D 343
Query: 266 ADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSG 304
D +P+L + +G+ R VV+ K+G + DR G
Sbjct: 344 MDNVMSPVLADVKIDGKDRKVVIYGSKTGMYYILDRKDG 382
>gi|427384451|ref|ZP_18880956.1| hypothetical protein HMPREF9447_01989 [Bacteroides oleiciplenus YIT
12058]
gi|425727712|gb|EKU90571.1| hypothetical protein HMPREF9447_01989 [Bacteroides oleiciplenus YIT
12058]
Length = 619
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 64/296 (21%), Positives = 118/296 (39%), Gaps = 47/296 (15%)
Query: 25 VRNLRLRWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIW----EQNLSKLT 80
++N + W+F +GK I TPAVA+G+V F S + +Y +N+ +G+L+W E+ +
Sbjct: 323 LKNGKKLWNFQSGKRIVGTPAVADGIVVFGSADRNIYGLNSKDGSLLWTVRAEEPVLGAV 382
Query: 81 GLSGTGIVVNVTVAVVVAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEE 140
+ + + + A+ G+++W+ Y G+ E
Sbjct: 383 AIENSIAYIGASDHTFRAIDIHTGKVIWA----------------------YTGVKGYIE 420
Query: 141 ALP---ADQCC--TFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYSGAAVWGSSPAIDV 195
P AD+ + +L L+ +G+ +W+ G R +S AAVW + V
Sbjct: 421 TKPLITADKVIFGAWDNTLYALNKADGKELWKW----TGGLTRMHFSPAAVWPVAANGKV 476
Query: 196 IRRQKQNNQTTKPTHPDQCISSDIYANSIVALDI---DSGRIAWAKPLGGYDIFYFTCLV 252
Q T + + SIV I + G ++K + + Y T
Sbjct: 477 FITDPQRAMTAINIENGETVWRTF--QSIVRETIGLSEDGEQVYSKTMNDSIVCYATQ-- 532
Query: 253 PNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDIIW 308
N P N+ + AP + + +G V+ K G +A + +G ++W
Sbjct: 533 GNQPRELWASNVGFGYEHAPS-MQVEKDG----VMFGSTKEGLIFALEPKTGKVLW 583
>gi|253988870|ref|YP_003040226.1| conserved hypothetical protein [Photorhabdus asymbiotica]
gi|253780320|emb|CAQ83481.1| conserved hypothetical protein [Photorhabdus asymbiotica]
Length = 390
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 94/240 (39%), Gaps = 59/240 (24%)
Query: 43 TPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG---------------LSGTGI 87
TP VVY NG + A++ +G IW NL++ G +SG +
Sbjct: 61 TPTWQGSVVYVADRNGIVKALDIDSGKEIWSVNLAEKAGFLSSRIPALLSGGLTVSGDHL 120
Query: 88 VVNVTVAVVVAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQC 147
V A V+A++ ++G++ W +++ S+ +S + +
Sbjct: 121 YVGTERAKVIALNTADGQVAWESEVAGEALSRPVVSDGLVL------------------I 162
Query: 148 CTFRGSLAKLDVRNGRIIWQTYMLPDNGGKRG------GYSGAAVWGSSPAIDVI----- 196
T G L L+ +G+I W M + RG Y A V G + I+ I
Sbjct: 163 HTSNGMLQALNESDGKIQWSVNMDTPSLSLRGESAPAVAYGAAIVGGDNGRINAILISQG 222
Query: 197 -----RRQKQNNQTTK----------PTHPDQCISSDIYANSIVALDIDSGRIAWAKPLG 241
+R Q +T+ P + I + Y ++VALD+ SG+I W + LG
Sbjct: 223 QLIWQQRISQVTSSTEIGRLNDIDMTPVISEGVIYAIAYNGNLVALDMRSGQILWKRDLG 282
Score = 44.3 bits (103), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 63/155 (40%), Gaps = 30/155 (19%)
Query: 29 RLRWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLS----KLTGLSG 84
++ W + + P V++G+V + NG L A+N +G + W N+ L G S
Sbjct: 138 QVAWESEVAGEALSRPVVSDGLVLIHTSNGMLQALNESDGKIQWSVNMDTPSLSLRGESA 197
Query: 85 TGIVVNVTVA-----VVVAVSRSNGELVWSTQIDPRPRS-------QITMSGSVYMGAFY 132
+ + + A+ S G+L+W +I S I M+ + G Y
Sbjct: 198 PAVAYGAAIVGGDNGRINAILISQGQLIWQQRISQVTSSTEIGRLNDIDMTPVISEGVIY 257
Query: 133 VGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQ 167
+ G+L LD+R+G+I+W+
Sbjct: 258 --------------AIAYNGNLVALDMRSGQILWK 278
Score = 42.0 bits (97), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 55/101 (54%), Gaps = 5/101 (4%)
Query: 39 DISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTGL--SGTGIVVNVTVAVV 96
DI TP ++ GV+Y ++NG L A++ +G ++W+++L + + SG I + V
Sbjct: 244 DIDMTPVISEGVIYAIAYNGNLVALDMRSGQILWKRDLGSVNEMVVSGDNIYIVDQNDRV 303
Query: 97 VAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSS 137
+++ +S+G +W TQ + R+ + +Y G VG S
Sbjct: 304 MSLRQSDGVTLW-TQTKLQHRN--LTAPEMYNGYLVVGDSE 341
>gi|347818030|ref|ZP_08871464.1| PQQ-dependent dehydrogenase [Verminephrobacter aporrectodeae subsp.
tuberculatae At4]
Length = 608
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 70/359 (19%), Positives = 135/359 (37%), Gaps = 82/359 (22%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAG--KDISATPAVANGVVYFPS-WN 57
W GD+ N+RY+ + IN V +++ W+F G + +P V +G +Y S +
Sbjct: 43 WATQAGDMFNQRYSKLQ-QINKGNVGKMQVAWTFSTGVLRGHEGSPLVVDGTMYLHSPFP 101
Query: 58 GYLYAVNAFNGALIWE---------------QNLSKLTGLSGTGIVVNVTVAVVVAVSRS 102
++A++ ++W+ +++ + + + +VA+
Sbjct: 102 NKVFALDLETQKILWKYEPKQDQSVIAVMCCDTVNRGLAYAEGKVFLQQADTTLVALDAK 161
Query: 103 NGELVWSTQI-DPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRN 161
G++VW + DP+ + T + V+ G+S E + RG L +++
Sbjct: 162 TGKVVWQVKNGDPKLGATNTNAPHVFKDKVITGISGGEFGV--------RGFLVAYHIKD 213
Query: 162 GRIIWQTY-------MLPD-------NGGK----------------RGGYSGAAVWG--- 188
G + W+ Y ML D + GK + G WG
Sbjct: 214 GSLAWKGYSTGPDEEMLIDPVKTMTWSDGKLAPVGKDSSLKTWKEDQWKIGGGTTWGWYS 273
Query: 189 SSPAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYF 248
A + + N T P+ Q + ++ SI + D+D+G++ W + +D
Sbjct: 274 FDKATNAVYYGSGNPSTWNPS---QRPGDNKWSMSIWSRDVDTGKVNWVYQMTPFD---- 326
Query: 249 TCLVPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
D D +L I G+ +V ++GFA+ DR SG ++
Sbjct: 327 --------------EWDYDGVNEMILADIDVKGKPTKALVHFDRNGFAYTLDRVSGALL 371
>gi|219850569|ref|YP_002465002.1| serine/threonine protein kinase [Chloroflexus aggregans DSM 9485]
gi|219544828|gb|ACL26566.1| serine/threonine protein kinase [Chloroflexus aggregans DSM 9485]
Length = 687
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 74/169 (43%), Gaps = 26/169 (15%)
Query: 25 VRNLRLRWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQN----LSKLT 80
+R +RW+F + K I ++P + + VV+ S + ++YA++ G LIW+ +
Sbjct: 447 MRRGSVRWTFRSEKAIRSSPRIEDRVVFVGSDDQHVYAIDGLRGTLIWKYRTWNPIRSSA 506
Query: 81 GLSGTGIVVNVTVAVVVAVSRSNGELVWSTQIDPRPRSQITMS-GSVYMGAFYVGLSSL- 138
+ G+ + + V + G + W + RS T S G V++G+ L +L
Sbjct: 507 CIHGSSVYIGGDDGNVYCLDIRTGAVKWKQRTQQPVRSSPTYSDGLVFVGSLDQNLYALD 566
Query: 139 -EEALPADQCCT-------------------FRGSLAKLDVRNGRIIWQ 167
E PA + T G+L LD +NGR++W+
Sbjct: 567 AEGGWPAWRFRTGHYINSSPFVVGTRVFVGGVDGNLYALDTKNGRLVWK 615
Score = 43.1 bits (100), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 67/149 (44%), Gaps = 22/149 (14%)
Query: 23 VTVRNLRLRWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTGL 82
+ +R ++W + + ++P ++G+V+ S + LYA++A G W
Sbjct: 525 LDIRTGAVKWKQRTQQPVRSSPTYSDGLVFVGSLDQNLYALDAEGGWPAWRFRTGHYINS 584
Query: 83 S----GTGIVVNVTVAVVVAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSL 138
S GT + V + A+ NG LVW ++ SQIT S V G Y G ++
Sbjct: 585 SPFVVGTRVFVGGVDGNLYALDTKNGRLVWKYEVG----SQITSSPRVEGGRLYFG--AV 638
Query: 139 EEALPADQCCTFRGSLAKLDVRNGRIIWQ 167
++A+ C LD NG++IW+
Sbjct: 639 DQAV----YC--------LDAGNGQLIWK 655
Score = 39.3 bits (90), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 58/143 (40%), Gaps = 22/143 (15%)
Query: 29 RLRWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIW----EQNLSKLTGLSG 84
RW + IS++PAV +VY S +G LYA + G++ W E+ + +
Sbjct: 411 EFRWKYATEGGISSSPAVWQDMVYIGSEDGKLYAFDMRRGSVRWTFRSEKAIRSSPRIED 470
Query: 85 TGIVVNVTVAVVVAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPA 144
+ V V A+ G L+W R + I S ++ + Y+G
Sbjct: 471 RVVFVGSDDQHVYAIDGLRGTLIWKY----RTWNPIRSSACIHGSSVYIGGDD------- 519
Query: 145 DQCCTFRGSLAKLDVRNGRIIWQ 167
G++ LD+R G + W+
Sbjct: 520 -------GNVYCLDIRTGAVKWK 535
>gi|390956251|ref|YP_006420008.1| glucose dehydrogenase [Terriglobus roseus DSM 18391]
gi|390411169|gb|AFL86673.1| glucose dehydrogenase [Terriglobus roseus DSM 18391]
Length = 565
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 60/290 (20%), Positives = 114/290 (39%), Gaps = 50/290 (17%)
Query: 40 ISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTGLSGTG----------IVV 89
I T + +GV+Y + + ++A++A +G +W L K G + G I
Sbjct: 113 IKGTMIMVDGVMYVTTPDN-VWALDARDGHELWHY-LWKTRGGTHIGNRGVGMWKDRIFF 170
Query: 90 NVTVAVVVAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCT 149
+VAV G+ +W +I + + +G + + + P
Sbjct: 171 ETPDDFLVAVEAKTGKEIWHKEIASFDLQYFSTVAPIVIGNHVIVGTGDDLDEP------ 224
Query: 150 FRGSLAKLDVRNGRIIWQTYMLPDNGGKRG----------GYSGAAVW--GSSPAIDVIR 197
G L D G + W+ Y +P G G + G +W G+ +
Sbjct: 225 --GLLQSFDPMTGELQWKYYPVPMKEGDPGLDTWKNLDAASHGGGNIWVPGAYDPETHLY 282
Query: 198 RQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPD 257
N T T ++ +++Y S+VALD+++G++ W +Y T
Sbjct: 283 IFGTGNPTAAYTSMNRGPGANLYTCSLVALDVETGKMKW---------YYQTS------- 326
Query: 258 CPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
P D D + P L+ + NG+ R +V+ ++G+ + DR +G+ +
Sbjct: 327 --PHDTHDFDSAQTPTLVDGTWNGKPRKLVLTAARNGYFFVIDRLTGEHL 374
>gi|146312647|ref|YP_001177721.1| outer membrane protein assembly complex subunit YfgL [Enterobacter
sp. 638]
gi|145319523|gb|ABP61670.1| Pyrrolo-quinoline quinone [Enterobacter sp. 638]
Length = 392
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 93/226 (41%), Gaps = 24/226 (10%)
Query: 44 PAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG--------------LSGTGIVV 89
PA A+ VVY G + A NA +G +W NL++ G +SG + V
Sbjct: 65 PAFADNVVYAADRKGTVRAFNADDGKEVWSVNLAEKDGWFSRAPALLSGGLTVSGGHVYV 124
Query: 90 NVTVAVVVAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVG-LSSLEEALPADQCC 148
A V A++ ++G + W +++ S+ +S V + G L +L EA A +
Sbjct: 125 GSEKAQVYALNTNDGSVAWQSRVAGEALSRPVVSDGVVLIHTSNGQLQALNEADGAVK-W 183
Query: 149 TFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYS------GAAVWGS--SPAIDVIRRQK 200
T + L +R + GG G S G +W S A +
Sbjct: 184 TVNLDMPALSLRGESAPATAFGAAIVGGDNGRVSAVLMQQGQMIWQQRISQATGPTEIDR 243
Query: 201 QNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIF 246
++ T P D + + Y ++ ALD+ SG++ W + LG + F
Sbjct: 244 LSDVDTTPVIVDNVVYALAYNGNLTALDLRSGQVMWKRELGSVNDF 289
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 63/153 (41%), Gaps = 26/153 (16%)
Query: 32 WSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLS----KLTGLSGTGI 87
W + + P V++GVV + NG L A+N +GA+ W NL L G S
Sbjct: 143 WQSRVAGEALSRPVVSDGVVLIHTSNGQLQALNEADGAVKWTVNLDMPALSLRGESAPAT 202
Query: 88 VVNVTVA-----VVVAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEAL 142
+ V AV G+++W +I SQ T G + S +
Sbjct: 203 AFGAAIVGGDNGRVSAVLMQQGQMIWQQRI-----SQAT-------GPTEIDRLSDVDTT 250
Query: 143 P--ADQ---CCTFRGSLAKLDVRNGRIIWQTYM 170
P D + G+L LD+R+G+++W+ +
Sbjct: 251 PVIVDNVVYALAYNGNLTALDLRSGQVMWKREL 283
>gi|319443752|pdb|3PRW|A Chain A, Crystal Structure Of The Lipoprotein Bamb
Length = 377
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 95/226 (42%), Gaps = 24/226 (10%)
Query: 44 PAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG--------------LSGTGIVV 89
PA+A+ VVY G + A+NA +G IW +L++ G +SG + +
Sbjct: 50 PALADNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVSGGHVYI 109
Query: 90 NVTVAVVVAVSRSNGELVWSTQIDPRPRSQITMS-GSVYMGAFYVGLSSLEEALPADQCC 148
A V A++ S+G + W T++ S+ +S G V + L +L EA A +
Sbjct: 110 GSEKAQVYALNTSDGTVAWQTKVAGEALSRPVVSDGLVLIHTSNGQLQALNEADGAVK-W 168
Query: 149 TFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYS------GAAVWGS--SPAIDVIRRQK 200
T + L +R + GG G S G +W S A +
Sbjct: 169 TVNLDMPSLSLRGESAPTTAFGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDR 228
Query: 201 QNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIF 246
++ T P + + + Y ++ ALD+ SG+I W + LG + F
Sbjct: 229 LSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQIMWKRELGSVNDF 274
Score = 41.6 bits (96), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 63/157 (40%), Gaps = 34/157 (21%)
Query: 32 WSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLS----KLTGLSGTGI 87
W + + P V++G+V + NG L A+N +GA+ W NL L G S
Sbjct: 128 WQTKVAGEALSRPVVSDGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTT 187
Query: 88 VVNVTVA-----VVVAVSRSNGELVW---------STQIDPRPRSQITMSGSVYMGAFYV 133
V V AV G+++W ST+ID S + + V G +
Sbjct: 188 AFGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEID--RLSDVDTTPVVVNGVVF- 244
Query: 134 GLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYM 170
+ G+L LD+R+G+I+W+ +
Sbjct: 245 -------------ALAYNGNLTALDLRSGQIMWKREL 268
Score = 39.3 bits (90), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 61/131 (46%), Gaps = 19/131 (14%)
Query: 39 DISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG--LSGTGIVVNVTVAVV 96
D+ TP V NGVV+ ++NG L A++ +G ++W++ L + + G I + V
Sbjct: 231 DVDTTPVVVNGVVFALAYNGNLTALDLRSGQIMWKRELGSVNDFIVDGNRIYLVDQNDRV 290
Query: 97 VAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAK 156
+A++ G +W TQ D R + S +Y G VG S G L
Sbjct: 291 MALTIDGGVTLW-TQSDLLHR--LLTSPVLYNGNLVVGDS--------------EGYLHW 333
Query: 157 LDVRNGRIIWQ 167
++V +GR + Q
Sbjct: 334 INVEDGRFVAQ 344
>gi|213022895|ref|ZP_03337342.1| outer membrane protein assembly complex subunit YfgL [Salmonella
enterica subsp. enterica serovar Typhi str. 404ty]
Length = 302
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 91/243 (37%), Gaps = 58/243 (23%)
Query: 44 PAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG--------------LSGTGIVV 89
P +A+ VVY G + A+NA +G IW NL + G ++G + +
Sbjct: 65 PVMADNVVYAADRAGVVKALNADDGKEIWSVNLGEKDGWFSRSSALLSGGVTVAGGHVYI 124
Query: 90 NVTVAVVVAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCT 149
A V A++ S+G W T++ S+ +S + + T
Sbjct: 125 GSEKAEVYALNTSDGTTAWQTKVAGEALSRPVVSDGIVL------------------IHT 166
Query: 150 FRGSLAKLDVRNGRIIWQTYMLPDNGGKRG------GYSGAAVWGSSPAIDVIRRQKQN- 202
G L L+ +G I W + + RG + A V G + + + Q+
Sbjct: 167 SNGQLQALNQADGAIKWTVNLDMPSLSLRGESAPATAFGAAIVGGDNGRVSAVLMQQGQM 226
Query: 203 ------NQTTKPTHPDQCISSDI-------------YANSIVALDIDSGRIAWAKPLGGY 243
+Q T PT D+ D Y ++ ALD+ SG+I W + LG
Sbjct: 227 IWQQRISQATGPTEIDRLSDVDTTPVVVNGVVYALAYNGNLTALDLRSGQIMWKRELGSV 286
Query: 244 DIF 246
+ F
Sbjct: 287 NDF 289
Score = 42.7 bits (99), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 61/155 (39%), Gaps = 30/155 (19%)
Query: 32 WSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLS----KLTGLSGTGI 87
W + + P V++G+V + NG L A+N +GA+ W NL L G S
Sbjct: 143 WQTKVAGEALSRPVVSDGIVLIHTSNGQLQALNQADGAIKWTVNLDMPSLSLRGESAPAT 202
Query: 88 VVNVTVA-----VVVAVSRSNGELVWSTQI-------DPRPRSQITMSGSVYMGAFYVGL 135
+ V AV G+++W +I + S + + V G Y
Sbjct: 203 AFGAAIVGGDNGRVSAVLMQQGQMIWQQRISQATGPTEIDRLSDVDTTPVVVNGVVY--- 259
Query: 136 SSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYM 170
+ G+L LD+R+G+I+W+ +
Sbjct: 260 -----------ALAYNGNLTALDLRSGQIMWKREL 283
>gi|255035398|ref|YP_003086019.1| glycerol dehydrogenase [Dyadobacter fermentans DSM 18053]
gi|254948154|gb|ACT92854.1| Glycerol dehydrogenase (acceptor) [Dyadobacter fermentans DSM
18053]
Length = 722
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 46/91 (50%), Gaps = 18/91 (19%)
Query: 218 DIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTI 277
++Y NS+VALD +GR W L +D++ D D P L+T+
Sbjct: 294 NLYGNSVVALDAATGRYIWHYQLVHHDLW------------------DYDLPAPPNLVTV 335
Query: 278 STNGRFRDVVVAVQKSGFAWAFDRDSGDIIW 308
+ +G+ D V V K GF + F+R++G+ ++
Sbjct: 336 NRDGQKIDAVAQVTKHGFVFVFNRENGEPLF 366
>gi|326800163|ref|YP_004317982.1| quinoprotein glucose dehydrogenase [Sphingobacterium sp. 21]
gi|326550927|gb|ADZ79312.1| Quinoprotein glucose dehydrogenase [Sphingobacterium sp. 21]
Length = 733
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 77/372 (20%), Positives = 131/372 (35%), Gaps = 105/372 (28%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAGK--------DISATPAVANGVVY 52
W +GG+ RY+ IN V+ L + W + G+ +I P + NGV+Y
Sbjct: 35 WPVYGGNNFGNRYSPLN-QINTENVQYLNVAWEYQTGENKSGERPFEIQCQPIIVNGVLY 93
Query: 53 FPSWNGYLYAVNAFNGALIW--------EQNLSKLTGLS-----GTGIVVNVTVAVVVAV 99
+ ++A++A G IW E GLS G ++ + + A+
Sbjct: 94 GTTPQLKVFALDAATGKEIWVFDPFKTSEPQYHANRGLSFWEGKGAKRILFTAGSFLYAI 153
Query: 100 SRSNG----ELVWSTQIDPRPRSQITMS-------------GSVYMGAFYVG--LSSLEE 140
G E + ++D + +S G +Y +G +S +
Sbjct: 154 DAYTGLPVTEFGEAGKVDLHKGLEENLSHDISNLFVIATSPGIIYKNTIVMGSRVSEFGD 213
Query: 141 ALPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNGG------KRGGYS---GAAVWGS-- 189
A P G + DV +G+I W + +P G + Y GA W
Sbjct: 214 AAP--------GHIRAYDVLSGKIKWIFHTIPQPGEFGYDTWPKDAYKKIGGANCWSGMV 265
Query: 190 -------------SPAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAW 236
SP++D + ++++AN I+ALD ++GR W
Sbjct: 266 LDSKRGVVYLGTGSPSVDFYGGDRH--------------GTNLFANCILALDAETGRRIW 311
Query: 237 AKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFA 296
+D++ D D P L+ + G+ D V K G
Sbjct: 312 HFQTIHHDLW------------------DRDLSNPPNLVRVKHQGKLIDAVAQATKDGVI 353
Query: 297 WAFDRDSGDIIW 308
+ DRDSG ++
Sbjct: 354 YVLDRDSGKPLF 365
>gi|182678186|ref|YP_001832332.1| Pyrrolo-quinoline quinone [Beijerinckia indica subsp. indica ATCC
9039]
gi|182634069|gb|ACB94843.1| Pyrrolo-quinoline quinone [Beijerinckia indica subsp. indica ATCC
9039]
Length = 545
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 63/294 (21%), Positives = 114/294 (38%), Gaps = 61/294 (20%)
Query: 44 PAVANGVVY----FPSWNGYLYAVNAFNGALIW-------EQNLS---KLTGLSGTGIVV 89
PA ++ V+Y F S A++A N IW ++ LS + + ++
Sbjct: 94 PAQSSPVLYDNHLFLSIGQTTVAIDARNCKEIWRYEWVLKDKALSTPNRGVAIKDGKVIR 153
Query: 90 NVTVAVVVAVSRSNGELVWSTQIDPRPRSQ-ITMSGSVYMGAFYVGLSSLEEALPADQCC 148
+ ++A+ S+G+L+W QI S ++M V A G + +
Sbjct: 154 GTSDGFLIALDMSDGKLLWERQITSASDSHYLSMPAMVVEDAIIYGTAGADWG------- 206
Query: 149 TFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYSGAAVWGSSPAI--------DVIRRQK 200
RG + +++G+ +W+ LP + G SGA WG A+ I +
Sbjct: 207 -SRGWIGAFSLKDGQQLWRFEALP-----KPGESGAETWGKGEALAHGGGSFWTPISIDR 260
Query: 201 QNNQTTKPT-------HPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVP 253
NN P + D ++ N++ ALD+ +G+ WA VP
Sbjct: 261 ANNLAFVPIGNPAPDFYGDARKGDNLDTNALAALDLKTGQKVWAHQF-----------VP 309
Query: 254 NNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
++ D D + L+++ G+ +++V K G DRD+ I
Sbjct: 310 HD-------EHDWDLSQTSPLVSVDIEGKPHNLIVVSGKDGRVRLVDRDTHGIF 356
>gi|116621182|ref|YP_823338.1| pyrrolo-quinoline quinone [Candidatus Solibacter usitatus
Ellin6076]
gi|116224344|gb|ABJ83053.1| Pyrrolo-quinoline quinone [Candidatus Solibacter usitatus
Ellin6076]
Length = 572
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 56/283 (19%), Positives = 108/283 (38%), Gaps = 48/283 (16%)
Query: 46 VANGVVYFPSWNGYLYAVNAFNGALIWE---------QNLSKLTGLSGTGIVVNVTVAVV 96
+ +G++Y S + +A+NA +G ++W ++ G+ G + + +
Sbjct: 123 MVDGILYASSPDN-AWAINAADGHVLWHYVWKTKGGTHTGNRGMGMWGNWLFLETPDDYL 181
Query: 97 VAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAK 156
V++ G+ W QI + + + +G + + + PA L
Sbjct: 182 VSLDARTGKERWHKQIASLAAQYFSTAAPMVVGRHVLVGTGNDLDSPA--------FLQS 233
Query: 157 LDVRNGRIIWQTYMLPDNGGKRGG----------YSGAAVW--GSSPAIDVIRRQKQNNQ 204
D G + W+ Y P G G + G +W GS + N
Sbjct: 234 FDPETGDLQWKWYATPQKKGDPGLDTWANLDAAIHGGGQMWIPGSYDPETHLYIVGTGNP 293
Query: 205 TTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNL 264
T T + ++Y S+VA+++D+G++AW YF P
Sbjct: 294 TPAYTSQTRGEGDNLYTCSLVAINVDTGKLAW----------YF--------QTSPHDTH 335
Query: 265 DADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
D D + P+L NGR R + + ++G+ + DR +G+ +
Sbjct: 336 DWDSTQMPVLFDAEFNGRKRKMAMQATRNGYFYVVDRLTGEHL 378
>gi|334132598|ref|ZP_08506355.1| Pyrrolo-quinoline quinone [Methyloversatilis universalis FAM5]
gi|333442564|gb|EGK70534.1| Pyrrolo-quinoline quinone [Methyloversatilis universalis FAM5]
Length = 583
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 79/325 (24%), Positives = 121/325 (37%), Gaps = 99/325 (30%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAG--KDISATPAVANGVVYFPSWNG 58
W G D N R A I P +V+ L +W + +G ATP V G +Y
Sbjct: 27 WPTFGLDYANTRLA-DLPGITPRSVKKLVPKWIYQSGIAATFQATPIVTGGKIYVSLPGS 85
Query: 59 YLYAVNAFNGALIWEQNLSKLT-----GLSGTGIVVN---VTVAVV----VAVSRSNGEL 106
++ A++A G +W SK + G + G+ V+ V VA V VA+ ++G+
Sbjct: 86 HVVALDARTGVELWRYTHSKRSEKLCCGPANRGVAVDDGRVFVATVDARLVALDAASGKP 145
Query: 107 VWSTQIDPRPRSQITMSGS-------------------VYMGAFYVGLSSLEEALPAD-- 145
+W ++ RP + IT SG+ V G VG++ + L D
Sbjct: 146 LWDIEL-ARPDNAITESGAGIKGEVGGGSGVGAAAAPLVVDGKVIVGINGVGYGLHIDAQ 204
Query: 146 ----QCCTFR---------GSLAKLDVRNGRIIWQ--TYMLPDNGGKRGG---------- 180
Q G LA D + G+ +WQ T P +GG G
Sbjct: 205 GRAGQLAAVVGIAGKYGGIGFLAAFDAKTGQRVWQFDTVRKPADGGWEGDFVERTGDGLP 264
Query: 181 --------------------YSGAAVWGSSPAIDVI---------RRQKQNNQTTKPTHP 211
Y G +VW ++PA D Q N +T+P
Sbjct: 265 LNRNIAEERANADRHRDAWEYGGGSVW-NAPAYDAKTGLLYFGTGNPSPQINDSTRP--- 320
Query: 212 DQCISSDIYANSIVALDIDSGRIAW 236
++Y S++A+D +GR AW
Sbjct: 321 ----GDNLYTASLIAVDAKTGRYAW 341
>gi|328542636|ref|YP_004302745.1| methanol dehydrogenase large subunit-like protein [Polymorphum
gilvum SL003B-26A1]
gi|326412382|gb|ADZ69445.1| Methanol dehydrogenase large subunit-like protein [Polymorphum
gilvum SL003B-26A1]
Length = 600
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 78/359 (21%), Positives = 138/359 (38%), Gaps = 85/359 (23%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAG--KDISATPAVANGVVY----FP 54
W+ GD N R++ + IN V++L++ W+F G + +P V V+Y FP
Sbjct: 35 WVLQTGDYANTRFSQLDE-INKDNVKDLQVAWTFSTGVLRGHEGSPLVVGDVMYVHTPFP 93
Query: 55 SWNGYLYAVNAFN-GALIWE---------------QNLSKLTGLSGTGIVVNVTVAVVVA 98
+ ++A++ N G ++W + + + + ++ VVA
Sbjct: 94 N---NVFALDLNNDGKILWRYEPKQDPDVIAVMCCDTVYRGLAYADGKLFLHQADTTVVA 150
Query: 99 VSRSNGELVWST-QIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKL 157
+ +G ++WS DP T + VG+S E + RGS+
Sbjct: 151 LDAKSGAVLWSVVNGDPSIGETNTATVLPVKDKVIVGISGGEFGV--------RGSVTAY 202
Query: 158 DVRNGRIIWQTY-MLPDNG---------------GKRGGYS----------GAAVWG--- 188
++ G +W+ Y M PD GK G + G WG
Sbjct: 203 NMNTGERVWRAYSMGPDEDILVDPEKTTHLGKPVGKDSGLNTWEGDQWKIGGGTTWGWYS 262
Query: 189 SSPAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYF 248
P D++ N T P+ Q + ++ +I+A + D+G +W F
Sbjct: 263 YDPEADLVYYGTGNPSTWNPS---QRPGDNRWSMTIMARNPDTGMASW-----------F 308
Query: 249 TCLVPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
+ P++ D D +L NG R V+V ++GFA+ DR SG+++
Sbjct: 309 YQMTPHD-------EWDYDGINEMILSDQEINGEMRKVLVHFDRNGFAYTMDRLSGELL 360
>gi|296445435|ref|ZP_06887392.1| PQQ-dependent dehydrogenase, methanol/ethanol family [Methylosinus
trichosporium OB3b]
gi|296257001|gb|EFH04071.1| PQQ-dependent dehydrogenase, methanol/ethanol family [Methylosinus
trichosporium OB3b]
Length = 621
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 94/242 (38%), Gaps = 59/242 (24%)
Query: 96 VVAVSRSNGELVWSTQI-DPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSL 154
VVAV G+ VW ++ DP + + + G S E + RGS+
Sbjct: 165 VVAVDAKTGKQVWRKKVADPWTGETLNTAPIIVRDKVIFGSSGSEMGI--------RGSV 216
Query: 155 AKLDVRNGRIIWQTY-----------------MLPDNGGKRGGYS---------GAAVWG 188
LD+ G ++WQ Y D G RG + GA+ W
Sbjct: 217 RALDLATGALVWQAYSTGPDAEVKIDSSFHPFYAKDQGVDRGATTWPGSLWRNGGASSWT 276
Query: 189 ---SSPAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDI 245
PA+D+I T +PD + +A +I A ++G+ AWA
Sbjct: 277 WVTYDPALDLIFYGTSQPGTF---NPDMRPGENKWAATIFARKPETGQAAWA-------- 325
Query: 246 FYFTCLVPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGD 305
Y T VP++ N D D ++ ++ G R V+V K+GF + DR +G+
Sbjct: 326 -YQT--VPHD-------NWDYDATSENTVVDLTIGGVKRQVIVNFHKNGFNYILDRATGE 375
Query: 306 II 307
++
Sbjct: 376 LV 377
>gi|429027649|ref|ZP_19093664.1| outer membrane assembly lipoprotein YfgL [Escherichia coli 96.0427]
gi|427278855|gb|EKW43310.1| outer membrane assembly lipoprotein YfgL [Escherichia coli 96.0427]
Length = 361
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 95/226 (42%), Gaps = 24/226 (10%)
Query: 44 PAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG--------------LSGTGIVV 89
PA+A+ VVY G + A+NA +G IW +L++ G +SG + +
Sbjct: 34 PALADNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVSGGHVYI 93
Query: 90 NVTVAVVVAVSRSNGELVWSTQIDPRPRSQITMS-GSVYMGAFYVGLSSLEEALPADQCC 148
A V A++ S+G + W T++ S+ +S G V + L +L EA A +
Sbjct: 94 GSEKAQVYALNTSDGTVAWQTKVAGEALSRPVVSDGLVLIHTSNGQLQALNEADGAVK-W 152
Query: 149 TFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYS------GAAVWGS--SPAIDVIRRQK 200
T + L +R + GG G S G +W S A +
Sbjct: 153 TVNLDMPSLSLRGESAPATAFGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDR 212
Query: 201 QNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIF 246
++ T P + + + Y ++ ALD+ SG+I W + LG + F
Sbjct: 213 LSDVDTTPAVVNGVVFALAYNGNLTALDLRSGQIMWKRELGSVNDF 258
Score = 43.1 bits (100), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 64/157 (40%), Gaps = 34/157 (21%)
Query: 32 WSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLS----KLTGLSGTGI 87
W + + P V++G+V + NG L A+N +GA+ W NL L G S
Sbjct: 112 WQTKVAGEALSRPVVSDGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPAT 171
Query: 88 VVNVTVA-----VVVAVSRSNGELVW---------STQIDPRPRSQITMSGSVYMGAFYV 133
V V AV G+++W ST+ID S + + +V G +
Sbjct: 172 AFGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEID--RLSDVDTTPAVVNGVVF- 228
Query: 134 GLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYM 170
+ G+L LD+R+G+I+W+ +
Sbjct: 229 -------------ALAYNGNLTALDLRSGQIMWKREL 252
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 62/131 (47%), Gaps = 19/131 (14%)
Query: 39 DISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG--LSGTGIVVNVTVAVV 96
D+ TPAV NGVV+ ++NG L A++ +G ++W++ L + + G I + V
Sbjct: 215 DVDTTPAVVNGVVFALAYNGNLTALDLRSGQIMWKRELGSVNDFIVDGNRIYLVDQNDRV 274
Query: 97 VAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAK 156
+A++ G +W TQ D R + S +Y G VG S G L
Sbjct: 275 MALTIDGGVTLW-TQSDLLHR--LLTSPVLYNGNLVVGDS--------------EGYLHW 317
Query: 157 LDVRNGRIIWQ 167
++V +GR + Q
Sbjct: 318 INVEDGRFVAQ 328
>gi|196230092|ref|ZP_03128955.1| Pyrrolo-quinoline quinone [Chthoniobacter flavus Ellin428]
gi|196225689|gb|EDY20196.1| Pyrrolo-quinoline quinone [Chthoniobacter flavus Ellin428]
Length = 717
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 72/339 (21%), Positives = 126/339 (37%), Gaps = 76/339 (22%)
Query: 20 INPVTVRNLRLRWSFYAGK--DISATPAVANGVVYFPSWNGYLYAVNAFNGALIWE---- 73
IN V L++ W++ G + + + GV+Y + + A++A G +W+
Sbjct: 57 INRDNVSQLQVAWTYDTGDKGEYQSNNLIVGGVLYTATPTRKVVALDAATGKELWKWDPV 116
Query: 74 -----QNLSKLTGL-------SGTGIVVNVTVAVVVAVSRSNGELVWSTQIDPRPRSQIT 121
N S+ GL G G + + A+ G+ P
Sbjct: 117 SERPGGNRSRERGLVFWQNESGGEGRIFTGVGNYLYALDTKTGQ----------PIRNFG 166
Query: 122 MSGSVYMGAFYVGLSSLEEALPA----DQCCTFR-----------GSLAKLDVRNGRIIW 166
+GS+++G GL E LPA T++ G++ DV G W
Sbjct: 167 QNGSIHLG---TGLDV--EGLPAVGLNTPGVTYKDMLIIGGFGGPGAMRAFDVHTGERRW 221
Query: 167 QTYMLPDNGGKRGGYSGAAVWGSSPAIDVIRRQKQNNQ------TTKPTHPD----QCIS 216
+++P G + ++ + Q + Q TK PD +
Sbjct: 222 IFHLIPRPGDVGYDTWPPEAYKTATGLMPWCGQSLDEQRGILYVATKTAEPDFYGGERHG 281
Query: 217 SDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLT 276
+++AN +VALD ++G+ W + +D+ LD D P+L+T
Sbjct: 282 DNLFANCLVALDANTGKRLWHFQIVHHDL------------------LDRDLPCPPVLIT 323
Query: 277 ISTNGRFRDVVVAVQKSGFAWAFDRDSGDIIWFKLAGPG 315
+ +G+ D V K G + FDR +G +W PG
Sbjct: 324 VMHDGKKVDAVAQGTKQGLLFVFDRVTGHPLWPIEEKPG 362
>gi|448576165|ref|ZP_21642208.1| serine/threonine protein kinase [Haloferax larsenii JCM 13917]
gi|445729845|gb|ELZ81439.1| serine/threonine protein kinase [Haloferax larsenii JCM 13917]
Length = 2029
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 66/149 (44%), Gaps = 18/149 (12%)
Query: 32 WSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTGLSGTGIVVNV 91
W++ ++ + PAV +GVVYF S +G + AVNA G +W LSK + VV+
Sbjct: 195 WNYSTQTNVRSAPAVVDGVVYFGSNDGNMTAVNASTGEELWYHTLSKPFLVESNPAVVDG 254
Query: 92 TVAV------VVAVSRSNGELVWS-TQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPA 144
V V A++ + G+ +W+ T +D +I +V ++G S
Sbjct: 255 VVYFGADDDNVTALNATTGQRIWNYTAMD-----EIQSDATVANNTVFIGSDSTSGTTSG 309
Query: 145 DQCCTFRGSLAKLDVRNGRIIWQTYMLPD 173
D G + L+ +G + W M D
Sbjct: 310 D------GQVYALNATDGSLRWNYTMTGD 332
Score = 46.2 bits (108), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 66/149 (44%), Gaps = 18/149 (12%)
Query: 32 WSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTGLSGTGIVVNV 91
W++ ++ + PAV +GVVYF S +G + A+NA G +W LS+ + VV+
Sbjct: 732 WNYSTQTNVRSAPAVVDGVVYFGSNDGNMTALNASTGEELWYHTLSQPVLVESNPAVVDG 791
Query: 92 TVAV------VVAVSRSNGELVWS-TQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPA 144
V V A++ + G+ +W+ T +D +I +V ++G S
Sbjct: 792 VVYFGADDDNVTALNATTGQKIWNYTAVD-----EIQSDATVANDTVFIGSDSTSGTTSG 846
Query: 145 DQCCTFRGSLAKLDVRNGRIIWQTYMLPD 173
D G + L+ +G + W M D
Sbjct: 847 D------GQVYALNATDGSLRWNYTMTGD 869
Score = 38.5 bits (88), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 29/52 (55%)
Query: 30 LRWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG 81
LRW++ D+ +P A+G++Y S G L A+NA +G +W + S G
Sbjct: 323 LRWNYTMTGDVDGSPVYADGILYAGSRGGDLVALNAADGTKVWNVSRSDFRG 374
>gi|422835602|ref|ZP_16883656.1| lipoprotein yfgL [Escherichia coli E101]
gi|371612214|gb|EHO00730.1| lipoprotein yfgL [Escherichia coli E101]
Length = 392
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 94/226 (41%), Gaps = 24/226 (10%)
Query: 44 PAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG--------------LSGTGIVV 89
PA+A+ VVY G + A+NA +G IW +L++ G +SG + +
Sbjct: 65 PALADNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVSGGHVYI 124
Query: 90 NVTVAVVVAVSRSNGELVWSTQIDPRPRSQ-ITMSGSVYMGAFYVGLSSLEEALPADQCC 148
A V A++ S+G + W T++ S+ + G V + L +L EA A +
Sbjct: 125 GSEKAQVYALNTSDGTVAWQTKVTGEALSRPVVSDGLVLIHTSNGQLQALNEADGAVK-W 183
Query: 149 TFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYS------GAAVWGS--SPAIDVIRRQK 200
T + L +R + GG G S G +W S A +
Sbjct: 184 TVNLDMPSLSLRGESAPATAFGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDR 243
Query: 201 QNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIF 246
++ T P + + + Y ++ ALD+ SG+I W + LG + F
Sbjct: 244 LSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQIMWKRELGSVNDF 289
Score = 41.2 bits (95), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 63/157 (40%), Gaps = 34/157 (21%)
Query: 32 WSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLS----KLTGLSGTGI 87
W + + P V++G+V + NG L A+N +GA+ W NL L G S
Sbjct: 143 WQTKVTGEALSRPVVSDGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPAT 202
Query: 88 VVNVTVA-----VVVAVSRSNGELVW---------STQIDPRPRSQITMSGSVYMGAFYV 133
V V AV G+++W ST+ID S + + V G +
Sbjct: 203 AFGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEID--RLSDVDTTPVVVNGVVF- 259
Query: 134 GLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYM 170
+ G+L LD+R+G+I+W+ +
Sbjct: 260 -------------ALAYNGNLTALDLRSGQIMWKREL 283
Score = 38.9 bits (89), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 61/131 (46%), Gaps = 19/131 (14%)
Query: 39 DISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG--LSGTGIVVNVTVAVV 96
D+ TP V NGVV+ ++NG L A++ +G ++W++ L + + G I + V
Sbjct: 246 DVDTTPVVVNGVVFALAYNGNLTALDLRSGQIMWKRELGSVNDFIVDGNRIYLVDQNDRV 305
Query: 97 VAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAK 156
+A++ G +W TQ D R + S +Y G VG S G L
Sbjct: 306 MALTIDGGVTLW-TQSDLLHR--LLTSPVLYNGNLVVGDS--------------EGYLHW 348
Query: 157 LDVRNGRIIWQ 167
++V +GR + Q
Sbjct: 349 INVEDGRFVAQ 359
>gi|76803159|ref|YP_331254.1| cell surface protein/ lipoprotein [Natronomonas pharaonis DSM 2160]
gi|76559024|emb|CAI50622.1| PQQ repeat protein [Natronomonas pharaonis DSM 2160]
Length = 377
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 62/125 (49%), Gaps = 9/125 (7%)
Query: 29 RLRWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTGLSGTGIV 88
R W F ++A+PAVA+G VY S +G +YA+NA GA W G+ + V
Sbjct: 120 RDEWRFETTDWVTASPAVADGTVYVGSTDGTMYALNAETGAEQW--RFETGDGIVSSPAV 177
Query: 89 VNVTVAV------VVAVSRSNGELVWSTQIDPRPRSQITMS-GSVYMGAFYVGLSSLEEA 141
V+ TV V V A+ +G W + R S T++ G+VY+G++ + +++
Sbjct: 178 VDGTVYVGSTDGTVYALDADSGTDRWQFDTEGRVYSSPTVADGTVYVGSYDANIYAIDTT 237
Query: 142 LPADQ 146
+Q
Sbjct: 238 DGVEQ 242
>gi|423095151|ref|ZP_17082947.1| quinoprotein ethanol dehydrogenase PedH [Pseudomonas fluorescens
Q2-87]
gi|397889198|gb|EJL05681.1| quinoprotein ethanol dehydrogenase PedH [Pseudomonas fluorescens
Q2-87]
Length = 591
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 71/351 (20%), Positives = 134/351 (38%), Gaps = 75/351 (21%)
Query: 2 LNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAG----KDISATPAVANGVVYFPSWN 57
+ +G + +RY+ + L N V++LR W+F G + A P + +GV+Y
Sbjct: 45 VTNGLGVQGQRYSPLDTL-NIDNVKDLRPVWAFSFGGEKQRGQQAQPMIKDGVMYLTGSY 103
Query: 58 GYLYAVNAFNGALIWEQN-------------LSKLTGLSGTGIVVNVTVAVVVAVSRSNG 104
++AV+A G +W+ + +++ L G + A +VA+++ G
Sbjct: 104 SRVFAVDARTGKKLWQYDARLPDDIRPCCDVINRGVALYGDLVFFGTLDAKLVALNKDTG 163
Query: 105 ELVWSTQI-DPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGR 163
++VWS ++ D + I+ + V G G++ E + G ++ D +NG
Sbjct: 164 KVVWSKKVADHKEGYSISAAPLVVNGKLITGVAGGEFGV--------VGQISAYDPKNGD 215
Query: 164 IIWQT--------YMLPDNGGKRGGYSGAA--------VW---GSSPAIDVIRRQKQN-- 202
++W Y+ D G SG +W G++P + + N
Sbjct: 216 LLWTRPTVEGHMGYVYKDGKAVENGISGGEAGKTWPGDLWKTGGAAPWLGGYYDPETNLL 275
Query: 203 ---NQTTKPTHPDQCISSDIYANSIVALDIDSGRIAW---AKPLGGYDIFYFTCLVPNNP 256
P + ++Y++S +AL+ D G I W + P G+D L+ N
Sbjct: 276 LFGTGNPAPWNSHLRPGDNLYSSSRLALNPDDGTIKWHFQSTPHDGWDYDGVNELISFN- 334
Query: 257 DCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
G+ ++GF + DR +G I
Sbjct: 335 --------------------YKEGGKEIKAAATADRNGFFYVLDRTNGKFI 365
>gi|238788167|ref|ZP_04631962.1| hypothetical protein yfred0001_36150 [Yersinia frederiksenii ATCC
33641]
gi|238723754|gb|EEQ15399.1| hypothetical protein yfred0001_36150 [Yersinia frederiksenii ATCC
33641]
Length = 393
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 66/161 (40%), Gaps = 36/161 (22%)
Query: 29 RLRWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLS----KLTGLSG 84
++ W + + P V++GVV + NG L A+N +GA+ W NL L G S
Sbjct: 141 QVAWQTVVAGEALSRPVVSDGVVLIHTSNGMLQALNESDGAIKWTLNLDTPALSLRGESA 200
Query: 85 TGIVVNVTVA-----VVVAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLE 139
+ + V AV G+L+W +I SQ+T G + ++
Sbjct: 201 PAVAFGAAIVGGDNGRVSAVMMEQGQLIWQQRI-----SQVT------------GTTEID 243
Query: 140 EALPADQ----------CCTFRGSLAKLDVRNGRIIWQTYM 170
D + G+L LD+R+G+I+W+ M
Sbjct: 244 RLNDVDTTPVVVDGVVYALAYNGNLTALDLRSGQILWKREM 284
Score = 40.0 bits (92), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 85/197 (43%), Gaps = 40/197 (20%)
Query: 51 VYFPSWNGYLYAVNAFNGALIWE-----QNLSKLTGLSGTGIVVNVTVAVVVAVSRSNGE 105
VY S +YA+N+ +G + W+ + LS+ G ++++ + ++ A++ S+G
Sbjct: 123 VYVGSEKAVVYALNSDDGQVAWQTVVAGEALSRPVVSDGV-VLIHTSNGMLQALNESDGA 181
Query: 106 LVWSTQIDPRPRSQITMSG-SVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRI 164
+ W+ +D S S +V GA VG + G ++ + + G++
Sbjct: 182 IKWTLNLDTPALSLRGESAPAVAFGAAIVGGDN--------------GRVSAVMMEQGQL 227
Query: 165 IWQTYMLPDNGGKRGGYSGAAVWGSSPAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSI 224
IWQ + G + ID + N+ T P D + + Y ++
Sbjct: 228 IWQQRISQVTG--------------TTEID-----RLNDVDTTPVVVDGVVYALAYNGNL 268
Query: 225 VALDIDSGRIAWAKPLG 241
ALD+ SG+I W + +G
Sbjct: 269 TALDLRSGQILWKREMG 285
>gi|386783161|pdb|3Q54|A Chain A, Crystal Structure Of Escherichia Coli Bamb
Length = 368
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 95/226 (42%), Gaps = 24/226 (10%)
Query: 44 PAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG--------------LSGTGIVV 89
PA+A+ VVY G + A+NA +G IW +L++ G +SG + +
Sbjct: 41 PALADNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVSGGHVYI 100
Query: 90 NVTVAVVVAVSRSNGELVWSTQIDPRPRSQITMS-GSVYMGAFYVGLSSLEEALPADQCC 148
A V A++ S+G + W T++ S+ +S G V + L +L EA A +
Sbjct: 101 GSEKAQVYALNTSDGTVAWQTKVAGEALSRPVVSDGLVLIHTSNGQLQALNEADGAVK-W 159
Query: 149 TFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYS------GAAVWGS--SPAIDVIRRQK 200
T + L +R + GG G S G +W S A +
Sbjct: 160 TVNLDMPSLSLRGESAPTTAFGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDR 219
Query: 201 QNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIF 246
++ T P + + + Y ++ ALD+ SG+I W + LG + F
Sbjct: 220 LSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQIMWKRELGSVNDF 265
Score = 41.6 bits (96), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 63/157 (40%), Gaps = 34/157 (21%)
Query: 32 WSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLS----KLTGLSGTGI 87
W + + P V++G+V + NG L A+N +GA+ W NL L G S
Sbjct: 119 WQTKVAGEALSRPVVSDGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTT 178
Query: 88 VVNVTVA-----VVVAVSRSNGELVW---------STQIDPRPRSQITMSGSVYMGAFYV 133
V V AV G+++W ST+ID S + + V G +
Sbjct: 179 AFGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEID--RLSDVDTTPVVVNGVVF- 235
Query: 134 GLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYM 170
+ G+L LD+R+G+I+W+ +
Sbjct: 236 -------------ALAYNGNLTALDLRSGQIMWKREL 259
Score = 39.3 bits (90), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 61/131 (46%), Gaps = 19/131 (14%)
Query: 39 DISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG--LSGTGIVVNVTVAVV 96
D+ TP V NGVV+ ++NG L A++ +G ++W++ L + + G I + V
Sbjct: 222 DVDTTPVVVNGVVFALAYNGNLTALDLRSGQIMWKRELGSVNDFIVDGNRIYLVDQNDRV 281
Query: 97 VAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAK 156
+A++ G +W TQ D R + S +Y G VG S G L
Sbjct: 282 MALTIDGGVTLW-TQSDLLHR--LLTSPVLYNGNLVVGDS--------------EGYLHW 324
Query: 157 LDVRNGRIIWQ 167
++V +GR + Q
Sbjct: 325 INVEDGRFVAQ 335
>gi|417718404|ref|ZP_12367301.1| outer membrane assembly lipoprotein YfgL [Shigella flexneri K-227]
gi|333016130|gb|EGK35462.1| outer membrane assembly lipoprotein YfgL [Shigella flexneri K-227]
Length = 392
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 94/226 (41%), Gaps = 24/226 (10%)
Query: 44 PAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG--------------LSGTGIVV 89
PA+A+ VVY G + A+NA +G IW +L++ G +SG + +
Sbjct: 65 PALADNVVYAADRAGLVKALNADDGKEIWSVSLAEKEGWFSKEPALLSGGVTVSGGHVYI 124
Query: 90 NVTVAVVVAVSRSNGELVWSTQIDPRPRSQ-ITMSGSVYMGAFYVGLSSLEEALPADQCC 148
A V A++ S+G + W T++ S+ + G V + L +L EA A +
Sbjct: 125 GSEKAQVYALNTSDGTVAWQTKVAGEALSRPVVSDGLVLIHTSNGQLQALNEADGAVK-W 183
Query: 149 TFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYS------GAAVWGS--SPAIDVIRRQK 200
T + L +R + GG G S G +W S A +
Sbjct: 184 TVNLDMPSLSLRGESAPATAFGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDR 243
Query: 201 QNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIF 246
++ T P + + + Y ++ ALD+ SG+I W + LG + F
Sbjct: 244 LSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQIMWKRELGSVNDF 289
Score = 42.0 bits (97), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 63/157 (40%), Gaps = 34/157 (21%)
Query: 32 WSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLS----KLTGLSGTGI 87
W + + P V++G+V + NG L A+N +GA+ W NL L G S
Sbjct: 143 WQTKVAGEALSRPVVSDGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPAT 202
Query: 88 VVNVTVA-----VVVAVSRSNGELVW---------STQIDPRPRSQITMSGSVYMGAFYV 133
V V AV G+++W ST+ID S + + V G +
Sbjct: 203 AFGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEID--RLSDVDTTPVVVNGVVF- 259
Query: 134 GLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYM 170
+ G+L LD+R+G+I+W+ +
Sbjct: 260 -------------ALAYNGNLTALDLRSGQIMWKREL 283
>gi|448283963|ref|ZP_21475228.1| pyrrolo-quinoline quinone [Natrialba magadii ATCC 43099]
gi|445572058|gb|ELY26600.1| pyrrolo-quinoline quinone [Natrialba magadii ATCC 43099]
Length = 275
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 57/111 (51%), Gaps = 8/111 (7%)
Query: 26 RNLRLRWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTGLSGT 85
R+ W+F G + +PAV +G VY S + LYA+NA +G W + +
Sbjct: 78 RDGTEEWAFETGDSVQTSPAVDDGTVYAGSRDNSLYALNAADGTEEWA--FETESSIVSD 135
Query: 86 GIVVNVTVAV-----VVAVSRSNGELVWSTQIDPRPRSQITMS-GSVYMGA 130
VVN T+ + V++ ++GE +WS + + S T++ G+VY+G+
Sbjct: 136 PTVVNGTIYIANSDGVLSAVDTHGEELWSFETNGGTNSNPTVADGTVYVGS 186
Score = 45.1 bits (105), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 54/112 (48%), Gaps = 4/112 (3%)
Query: 32 WSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKL--TGLSGTGIV- 88
WSF ++ P VA+G VY S +G LYAV+A +G W + L + S GIV
Sbjct: 163 WSFETNGGTNSNPTVADGTVYVGSGDGKLYAVDASDGTEEWTFDTDGLVFSPSSADGIVY 222
Query: 89 VNVTVAVVVAVSRSNGELVWSTQIDPRPRSQITMSGS-VYMGAFYVGLSSLE 139
V + AV ++G WS Q D S +S V +G+F L +LE
Sbjct: 223 VGSADNSLYAVDAADGSERWSYQTDDEVGSTPAISDELVVVGSFDGTLHALE 274
>gi|297517160|ref|ZP_06935546.1| outer membrane protein assembly complex subunit YfgL [Escherichia
coli OP50]
Length = 377
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 95/226 (42%), Gaps = 24/226 (10%)
Query: 44 PAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG--------------LSGTGIVV 89
PA+A+ VVY G + A+NA +G IW +L++ G +SG + +
Sbjct: 50 PALADNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVSGGHVYI 109
Query: 90 NVTVAVVVAVSRSNGELVWSTQIDPRPRSQITMS-GSVYMGAFYVGLSSLEEALPADQCC 148
A V A++ S+G + W T++ S+ +S G V + L +L EA A +
Sbjct: 110 GSEKAQVYALNTSDGTVAWQTKVAGEALSRPVVSDGLVLIHTSNGQLQALNEADGAVK-W 168
Query: 149 TFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYS------GAAVWGS--SPAIDVIRRQK 200
T + L +R + GG G S G +W S A +
Sbjct: 169 TVNLDMPSLSLRGESAPATAFGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDR 228
Query: 201 QNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIF 246
++ T P + + + Y ++ ALD+ SG+I W + LG + F
Sbjct: 229 LSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQIMWKRELGSVNDF 274
Score = 42.0 bits (97), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 63/157 (40%), Gaps = 34/157 (21%)
Query: 32 WSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLS----KLTGLSGTGI 87
W + + P V++G+V + NG L A+N +GA+ W NL L G S
Sbjct: 128 WQTKVAGEALSRPVVSDGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPAT 187
Query: 88 VVNVTVA-----VVVAVSRSNGELVW---------STQIDPRPRSQITMSGSVYMGAFYV 133
V V AV G+++W ST+ID S + + V G +
Sbjct: 188 AFGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEID--RLSDVDTTPVVVNGVVF- 244
Query: 134 GLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYM 170
+ G+L LD+R+G+I+W+ +
Sbjct: 245 -------------ALAYNGNLTALDLRSGQIMWKREL 268
Score = 39.3 bits (90), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 61/131 (46%), Gaps = 19/131 (14%)
Query: 39 DISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG--LSGTGIVVNVTVAVV 96
D+ TP V NGVV+ ++NG L A++ +G ++W++ L + + G I + V
Sbjct: 231 DVDTTPVVVNGVVFALAYNGNLTALDLRSGQIMWKRELGSVNDFIVDGNRIYLVDQNDRV 290
Query: 97 VAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAK 156
+A++ G +W TQ D R + S +Y G VG S G L
Sbjct: 291 MALTIDGGVTLW-TQSDLLHR--LLTSPVLYNGNLVVGDS--------------EGYLHW 333
Query: 157 LDVRNGRIIWQ 167
++V +GR + Q
Sbjct: 334 INVEDGRFVAQ 344
>gi|110806443|ref|YP_689963.1| outer membrane protein assembly complex subunit YfgL [Shigella
flexneri 5 str. 8401]
gi|424838838|ref|ZP_18263475.1| outer membrane protein assembly complex subunit YfgL [Shigella
flexneri 5a str. M90T]
gi|110615991|gb|ABF04658.1| putative dehydrogenase [Shigella flexneri 5 str. 8401]
gi|383467890|gb|EID62911.1| outer membrane protein assembly complex subunit YfgL [Shigella
flexneri 5a str. M90T]
Length = 392
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 94/226 (41%), Gaps = 24/226 (10%)
Query: 44 PAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG--------------LSGTGIVV 89
PA+A+ VVY G + A+NA +G IW +L++ G +SG + +
Sbjct: 65 PALADNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVSGRHVYI 124
Query: 90 NVTVAVVVAVSRSNGELVWSTQIDPRPRSQ-ITMSGSVYMGAFYVGLSSLEEALPADQCC 148
A V A++ S+G + W T++ S+ + G V + L +L EA A +
Sbjct: 125 GSEKAQVYALNTSDGTVAWQTKVAGEALSRPVVSDGLVLIHTSNGQLQALNEADGAVK-W 183
Query: 149 TFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYS------GAAVWGS--SPAIDVIRRQK 200
T + L +R + GG G S G +W S A +
Sbjct: 184 TVNLDMPSLSLRGESAPATAFGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDR 243
Query: 201 QNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIF 246
++ T P + + + Y ++ ALD+ SG+I W + LG + F
Sbjct: 244 LSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQIMWKRELGSVNDF 289
Score = 42.0 bits (97), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 63/157 (40%), Gaps = 34/157 (21%)
Query: 32 WSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLS----KLTGLSGTGI 87
W + + P V++G+V + NG L A+N +GA+ W NL L G S
Sbjct: 143 WQTKVAGEALSRPVVSDGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPAT 202
Query: 88 VVNVTVA-----VVVAVSRSNGELVW---------STQIDPRPRSQITMSGSVYMGAFYV 133
V V AV G+++W ST+ID S + + V G +
Sbjct: 203 AFGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEID--RLSDVDTTPVVVNGVVF- 259
Query: 134 GLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYM 170
+ G+L LD+R+G+I+W+ +
Sbjct: 260 -------------ALAYNGNLTALDLRSGQIMWKREL 283
>gi|315364663|pdb|3P1L|A Chain A, Crystal Structure Of Escherichia Coli Bamb, A Lipoprotein
Component Of The Beta-Barrel Assembly Machinery Complex,
Native Crystals
Length = 393
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 95/226 (42%), Gaps = 24/226 (10%)
Query: 44 PAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG--------------LSGTGIVV 89
PA+A+ VVY G + A+NA +G IW +L++ G +SG + +
Sbjct: 66 PALADNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVSGGHVYI 125
Query: 90 NVTVAVVVAVSRSNGELVWSTQIDPRPRSQITMS-GSVYMGAFYVGLSSLEEALPADQCC 148
A V A++ S+G + W T++ S+ +S G V + L +L EA A +
Sbjct: 126 GSEKAQVYALNTSDGTVAWQTKVAGEALSRPVVSDGLVLIHTSNGQLQALNEADGAVK-W 184
Query: 149 TFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYS------GAAVWGS--SPAIDVIRRQK 200
T + L +R + GG G S G +W S A +
Sbjct: 185 TVNLDMPSLSLRGESAPTTAFGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDR 244
Query: 201 QNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIF 246
++ T P + + + Y ++ ALD+ SG+I W + LG + F
Sbjct: 245 LSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQIMWKRELGSVNDF 290
Score = 41.6 bits (96), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 63/157 (40%), Gaps = 34/157 (21%)
Query: 32 WSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLS----KLTGLSGTGI 87
W + + P V++G+V + NG L A+N +GA+ W NL L G S
Sbjct: 144 WQTKVAGEALSRPVVSDGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTT 203
Query: 88 VVNVTVA-----VVVAVSRSNGELVW---------STQIDPRPRSQITMSGSVYMGAFYV 133
V V AV G+++W ST+ID S + + V G +
Sbjct: 204 AFGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEID--RLSDVDTTPVVVNGVVF- 260
Query: 134 GLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYM 170
+ G+L LD+R+G+I+W+ +
Sbjct: 261 -------------ALAYNGNLTALDLRSGQIMWKREL 284
Score = 38.9 bits (89), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 61/131 (46%), Gaps = 19/131 (14%)
Query: 39 DISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG--LSGTGIVVNVTVAVV 96
D+ TP V NGVV+ ++NG L A++ +G ++W++ L + + G I + V
Sbjct: 247 DVDTTPVVVNGVVFALAYNGNLTALDLRSGQIMWKRELGSVNDFIVDGNRIYLVDQNDRV 306
Query: 97 VAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAK 156
+A++ G +W TQ D R + S +Y G VG S G L
Sbjct: 307 MALTIDGGVTLW-TQSDLLHR--LLTSPVLYNGNLVVGDS--------------EGYLHW 349
Query: 157 LDVRNGRIIWQ 167
++V +GR + Q
Sbjct: 350 INVEDGRFVAQ 360
>gi|262165911|ref|ZP_06033648.1| conserved hypothetical membrane-spanning protein [Vibrio mimicus
VM223]
gi|262025627|gb|EEY44295.1| conserved hypothetical membrane-spanning protein [Vibrio mimicus
VM223]
Length = 386
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 33/148 (22%), Positives = 65/148 (43%), Gaps = 21/148 (14%)
Query: 25 VRNLRLRWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTGLSG 84
++ + +WS+ I +TP V +G+V F S +G +YA+N NG L+W+ +
Sbjct: 161 LKEGKAKWSYATQNAIRSTPVVYDGLVVFGSKDGGVYALNQRNGKLVWKHQTG--AAVVS 218
Query: 85 TGIVVNVTVAV------VVAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSL 138
IV++ V + + A+ G++VW + + + + F++G S
Sbjct: 219 DPIVMDDKVIISSRDTKIYALEVKTGKVVWQYAFPDQSWVESSAAADPSGKHFFIGSSDS 278
Query: 139 EEALPADQCCTFRGSLAKLDVRNGRIIW 166
+ L K D + G+++W
Sbjct: 279 HK-------------LQKFDAKTGKLVW 293
>gi|238752472|ref|ZP_04613948.1| hypothetical protein yrohd0001_22440 [Yersinia rohdei ATCC 43380]
gi|238709321|gb|EEQ01563.1| hypothetical protein yrohd0001_22440 [Yersinia rohdei ATCC 43380]
Length = 393
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 66/161 (40%), Gaps = 36/161 (22%)
Query: 29 RLRWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLS----KLTGLSG 84
++ W + + P V++GVV + NG L A+N +GA+ W NL L G S
Sbjct: 141 QVAWQTVVAGEALSRPVVSDGVVLIHTSNGMLQALNESDGAIKWTLNLDTPALSLRGESA 200
Query: 85 TGIVVNVTVA-----VVVAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLE 139
+ + V AV G+L+W +I SQ+T G + ++
Sbjct: 201 PAVAFGAAIVGGDNGRVSAVMMEQGQLIWQQRI-----SQVT------------GTTEID 243
Query: 140 EALPADQ----------CCTFRGSLAKLDVRNGRIIWQTYM 170
D + G+L LD+R+G+I+W+ M
Sbjct: 244 RLNDVDTTPVVVDGVVYALAYNGNLTALDLRSGQILWKREM 284
Score = 40.0 bits (92), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 43/197 (21%), Positives = 86/197 (43%), Gaps = 40/197 (20%)
Query: 51 VYFPSWNGYLYAVNAFNGALIWE-----QNLSKLTGLSGTGIVVNVTVAVVVAVSRSNGE 105
VY S +YA+N+ +G + W+ + LS+ G ++++ + ++ A++ S+G
Sbjct: 123 VYVGSEKAVVYALNSDDGQVAWQTVVAGEALSRPVVSDGV-VLIHTSNGMLQALNESDGA 181
Query: 106 LVWSTQID-PRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRI 164
+ W+ +D P + + +V GA VG + G ++ + + G++
Sbjct: 182 IKWTLNLDTPALSLRGESAPAVAFGAAIVGGDN--------------GRVSAVMMEQGQL 227
Query: 165 IWQTYMLPDNGGKRGGYSGAAVWGSSPAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSI 224
IWQ + G + ID + N+ T P D + + Y ++
Sbjct: 228 IWQQRISQVTG--------------TTEID-----RLNDVDTTPVVVDGVVYALAYNGNL 268
Query: 225 VALDIDSGRIAWAKPLG 241
ALD+ SG+I W + +G
Sbjct: 269 TALDLRSGQILWKREMG 285
>gi|432486294|ref|ZP_19728209.1| lipoprotein yfgL [Escherichia coli KTE212]
gi|433174414|ref|ZP_20358936.1| lipoprotein yfgL [Escherichia coli KTE232]
gi|431015503|gb|ELD29058.1| lipoprotein yfgL [Escherichia coli KTE212]
gi|431691626|gb|ELJ57084.1| lipoprotein yfgL [Escherichia coli KTE232]
Length = 392
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 95/243 (39%), Gaps = 58/243 (23%)
Query: 44 PAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG--------------LSGTGIVV 89
PA+A+ VVY G + A+NA +G IW +L++ G +SG + +
Sbjct: 65 PALADNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVSGGHVYI 124
Query: 90 NVTVAVVVAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCT 149
A V A++ S+G + W T++ S+ +S + + T
Sbjct: 125 GSEKAQVYALNTSDGTVAWQTKVAGEALSRPVVSDGLVL------------------IHT 166
Query: 150 FRGSLAKLDVRNGRIIWQTYMLPDNGGKRG------GYSGAAVWGSSPAIDVIRR----- 198
G L L+ +G + W + + RG + A V G + + +
Sbjct: 167 SNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPATAFGAAVVGGDNGRVSAVLMEQGQM 226
Query: 199 --QKQNNQTTKPTHPDQCISSDI-------------YANSIVALDIDSGRIAWAKPLGGY 243
Q++ +Q T T D+ D+ Y ++ ALD+ SG+I W + LG
Sbjct: 227 IWQQRISQATGSTEIDRLSDVDMTPVVVNGVVFALAYNGNLTALDLRSGQIMWKRELGSV 286
Query: 244 DIF 246
+ F
Sbjct: 287 NDF 289
Score = 44.7 bits (104), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 64/157 (40%), Gaps = 34/157 (21%)
Query: 32 WSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLS----KLTGLSGTGI 87
W + + P V++G+V + NG L A+N +GA+ W NL L G S
Sbjct: 143 WQTKVAGEALSRPVVSDGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPAT 202
Query: 88 VVNVTVA-----VVVAVSRSNGELVW---------STQIDPRPRSQITMSGSVYMGAFYV 133
V V AV G+++W ST+ID S + M+ V G +
Sbjct: 203 AFGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEID--RLSDVDMTPVVVNGVVF- 259
Query: 134 GLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYM 170
+ G+L LD+R+G+I+W+ +
Sbjct: 260 -------------ALAYNGNLTALDLRSGQIMWKREL 283
Score = 38.9 bits (89), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 61/131 (46%), Gaps = 19/131 (14%)
Query: 39 DISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG--LSGTGIVVNVTVAVV 96
D+ TP V NGVV+ ++NG L A++ +G ++W++ L + + G I + V
Sbjct: 246 DVDMTPVVVNGVVFALAYNGNLTALDLRSGQIMWKRELGSVNDFIVDGNRIYLVDQNDRV 305
Query: 97 VAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAK 156
+A++ G +W TQ D R + S +Y G VG S G L
Sbjct: 306 MALTIDGGVTLW-TQSDLLHR--LLTSPVLYNGNLVVGDS--------------EGYLHW 348
Query: 157 LDVRNGRIIWQ 167
++V +GR + Q
Sbjct: 349 INVEDGRFVAQ 359
>gi|421884937|ref|ZP_16316141.1| outer membrane protein assembly complex subunit YfgL [Salmonella
enterica subsp. enterica serovar Senftenberg str. SS209]
gi|379985471|emb|CCF88414.1| outer membrane protein assembly complex subunit YfgL [Salmonella
enterica subsp. enterica serovar Senftenberg str. SS209]
Length = 392
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 92/243 (37%), Gaps = 58/243 (23%)
Query: 44 PAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG--------------LSGTGIVV 89
P +A+ VVY G + A+NA +G IW NL + G ++G + +
Sbjct: 65 PVMADNVVYAADRAGVVKALNADDGKEIWSVNLGEKDGWFSRSSALLSGGVTVAGGHVYI 124
Query: 90 NVTVAVVVAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCT 149
A V A++ S+G W T++ S+ +S + + T
Sbjct: 125 GSEKAEVYALNTSDGTTAWQTKVAGEALSRPVVSDGIVL------------------IHT 166
Query: 150 FRGSLAKLDVRNGRIIWQTYMLPDNGGKRG------GYSGAAVWGSSPAIDVIRR----- 198
G L L+ +G I W + + RG + A V G + + +
Sbjct: 167 SNGQLQALNQADGVIKWTVNLDMPSLSLRGESAPATAFGAAIVGGDNGRVSAVLMQQGQM 226
Query: 199 --QKQNNQTTKPTHPDQCISSDI-------------YANSIVALDIDSGRIAWAKPLGGY 243
Q++ +Q T PT D+ D Y ++ ALD+ SG+I W + LG
Sbjct: 227 IWQQRISQATGPTEIDRLSDVDTTPVVVNGVVYALAYNGNLTALDLRSGQIMWKRELGSV 286
Query: 244 DIF 246
+ F
Sbjct: 287 NDF 289
Score = 41.2 bits (95), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 60/155 (38%), Gaps = 30/155 (19%)
Query: 32 WSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLS----KLTGLSGTGI 87
W + + P V++G+V + NG L A+N +G + W NL L G S
Sbjct: 143 WQTKVAGEALSRPVVSDGIVLIHTSNGQLQALNQADGVIKWTVNLDMPSLSLRGESAPAT 202
Query: 88 VVNVTVA-----VVVAVSRSNGELVWSTQI-------DPRPRSQITMSGSVYMGAFYVGL 135
+ V AV G+++W +I + S + + V G Y
Sbjct: 203 AFGAAIVGGDNGRVSAVLMQQGQMIWQQRISQATGPTEIDRLSDVDTTPVVVNGVVY--- 259
Query: 136 SSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYM 170
+ G+L LD+R+G+I+W+ +
Sbjct: 260 -----------ALAYNGNLTALDLRSGQIMWKREL 283
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 64/139 (46%), Gaps = 13/139 (9%)
Query: 39 DISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG--LSGTGIVVNVTVAVV 96
D+ TP V NGVVY ++NG L A++ +G ++W++ L + + G I + V
Sbjct: 246 DVDTTPVVVNGVVYALAYNGNLTALDLRSGQIMWKRELGSVNDFIVDGDRIYLVDQNDRV 305
Query: 97 VAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSS--------LEEALPADQCC 148
+A++ G +W TQ D R + S +Y G VG S + A Q
Sbjct: 306 LALTTDGGVTLW-TQSDLLHR--LLTSPVLYNGDLVVGDSEGYLHWINVDDGRFVAQQKV 362
Query: 149 TFRGSLAKLDVRNGRIIWQ 167
G L + V +G+++ Q
Sbjct: 363 DSSGFLTEPTVADGKLLIQ 381
>gi|448594648|ref|ZP_21652995.1| PQQ enzyme repeat domain protein [Haloferax alexandrinus JCM 10717]
gi|445744284|gb|ELZ95763.1| PQQ enzyme repeat domain protein [Haloferax alexandrinus JCM 10717]
Length = 419
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 30/49 (61%)
Query: 31 RWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKL 79
RWSF AG I TPA A+GVVY S++ +LYA++A G W + L
Sbjct: 110 RWSFEAGHRIEGTPAHADGVVYVGSYDKHLYALDAETGEERWSRGFGGL 158
Score = 38.1 bits (87), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 61/146 (41%), Gaps = 13/146 (8%)
Query: 30 LRWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTGLSGTGIVV 89
+ W+F A +P VA+G VY S + LYA++A G W + + GT
Sbjct: 69 VEWTFEADDAFWGSPIVADGTVYIGSADSALYALDAETGEERW--SFEAGHRIEGTPAHA 126
Query: 90 NVTVAV------VVAVSRSNGELVWSTQIDPRPRSQITM-SGSVYMGAFYVGLSSLEEAL 142
+ V V + A+ GE WS R T+ G+VY G VG +L A
Sbjct: 127 DGVVYVGSYDKHLYALDAETGEERWSRGFGGLIRGSPTVWDGTVYTG---VGCHNLACAW 183
Query: 143 PADQC-CTFRGSLAKLDVRNGRIIWQ 167
A++ + G + LD G W+
Sbjct: 184 YAEEANVSETGWVYALDAETGETEWR 209
Score = 38.1 bits (87), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Query: 9 NNRRY-AYGEVLINPVTVRNLRLRWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFN 67
NNR Y + + ++ + W++ I ++PAVA G VYF WNG ++A +A
Sbjct: 224 NNRVYVGTSDEALYALSRSTGEVEWTYETRDMIWSSPAVAYGSVYFTDWNGNVHAADAAT 283
Query: 68 GALIW 72
G W
Sbjct: 284 GEQEW 288
>gi|333944133|pdb|2YH3|A Chain A, The Structure Of Bamb From E. Coli
Length = 379
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 94/226 (41%), Gaps = 24/226 (10%)
Query: 44 PAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG--------------LSGTGIVV 89
PA+A+ VVY G + A+NA +G IW +L++ G +SG + +
Sbjct: 44 PALADNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVSGGHVYI 103
Query: 90 NVTVAVVVAVSRSNGELVWSTQIDPRPRSQ-ITMSGSVYMGAFYVGLSSLEEALPADQCC 148
A V A++ S+G + W T++ S+ + G V + L +L EA A +
Sbjct: 104 GSEKAQVYALNTSDGTVAWQTKVAGEALSRPVVSDGLVLIHTSNGQLQALNEADGAVK-W 162
Query: 149 TFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYS------GAAVWGS--SPAIDVIRRQK 200
T + L +R + GG G S G +W S A +
Sbjct: 163 TVNLDMPSLSLRGESAPTTAFGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDR 222
Query: 201 QNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIF 246
++ T P + + + Y ++ ALD+ SG+I W + LG + F
Sbjct: 223 LSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQIMWKRELGSVNDF 268
Score = 41.6 bits (96), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 63/157 (40%), Gaps = 34/157 (21%)
Query: 32 WSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLS----KLTGLSGTGI 87
W + + P V++G+V + NG L A+N +GA+ W NL L G S
Sbjct: 122 WQTKVAGEALSRPVVSDGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTT 181
Query: 88 VVNVTVA-----VVVAVSRSNGELVW---------STQIDPRPRSQITMSGSVYMGAFYV 133
V V AV G+++W ST+ID S + + V G +
Sbjct: 182 AFGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEID--RLSDVDTTPVVVNGVVF- 238
Query: 134 GLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYM 170
+ G+L LD+R+G+I+W+ +
Sbjct: 239 -------------ALAYNGNLTALDLRSGQIMWKREL 262
Score = 39.3 bits (90), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 61/131 (46%), Gaps = 19/131 (14%)
Query: 39 DISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG--LSGTGIVVNVTVAVV 96
D+ TP V NGVV+ ++NG L A++ +G ++W++ L + + G I + V
Sbjct: 225 DVDTTPVVVNGVVFALAYNGNLTALDLRSGQIMWKRELGSVNDFIVDGNRIYLVDQNDRV 284
Query: 97 VAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAK 156
+A++ G +W TQ D R + S +Y G VG S G L
Sbjct: 285 MALTIDGGVTLW-TQSDLLHR--LLTSPVLYNGNLVVGDS--------------EGYLHW 327
Query: 157 LDVRNGRIIWQ 167
++V +GR + Q
Sbjct: 328 INVEDGRFVAQ 338
>gi|416268571|ref|ZP_11642200.1| outer membrane protein assembly complex subunit YfgL [Shigella
dysenteriae CDC 74-1112]
gi|416299204|ref|ZP_11652285.1| outer membrane protein assembly complex subunit YfgL [Shigella
flexneri CDC 796-83]
gi|417683140|ref|ZP_12332490.1| outer membrane assembly lipoprotein YfgL [Shigella boydii 3594-74]
gi|420326669|ref|ZP_14828420.1| outer membrane assembly lipoprotein YfgL [Shigella flexneri CCH060]
gi|420353928|ref|ZP_14855028.1| outer membrane assembly lipoprotein YfgL [Shigella boydii 4444-74]
gi|420381538|ref|ZP_14880985.1| outer membrane assembly lipoprotein YfgL [Shigella dysenteriae
225-75]
gi|421683596|ref|ZP_16123389.1| outer membrane assembly lipoprotein YfgL [Shigella flexneri
1485-80]
gi|320175075|gb|EFW50188.1| outer membrane protein assembly complex subunit YfgL [Shigella
dysenteriae CDC 74-1112]
gi|320185212|gb|EFW59992.1| outer membrane protein assembly complex subunit YfgL [Shigella
flexneri CDC 796-83]
gi|332092753|gb|EGI97822.1| outer membrane assembly lipoprotein YfgL [Shigella boydii 3594-74]
gi|391250186|gb|EIQ09409.1| outer membrane assembly lipoprotein YfgL [Shigella flexneri CCH060]
gi|391277261|gb|EIQ36011.1| outer membrane assembly lipoprotein YfgL [Shigella boydii 4444-74]
gi|391299857|gb|EIQ57796.1| outer membrane assembly lipoprotein YfgL [Shigella dysenteriae
225-75]
gi|404337952|gb|EJZ64400.1| outer membrane assembly lipoprotein YfgL [Shigella flexneri
1485-80]
Length = 392
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 94/226 (41%), Gaps = 24/226 (10%)
Query: 44 PAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG--------------LSGTGIVV 89
PA+A+ VVY G + A+NA +G IW +L++ G +SG + +
Sbjct: 65 PALADNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVSGGHVYI 124
Query: 90 NVTVAVVVAVSRSNGELVWSTQIDPRPRSQ-ITMSGSVYMGAFYVGLSSLEEALPADQCC 148
A V A++ S+G + W T++ S+ + G V + L +L EA A +
Sbjct: 125 GSEKAQVYALNTSDGTVAWQTKVAGEALSRPVVSDGLVLIHTSNGQLQALNEADGAVK-W 183
Query: 149 TFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYS------GAAVWGS--SPAIDVIRRQK 200
T + L +R + GG G S G +W S A +
Sbjct: 184 TVNLDMPSLSLRGESAPATAFGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDR 243
Query: 201 QNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIF 246
++ T P + + + Y ++ ALD+ SG+I W + LG + F
Sbjct: 244 LSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQIMWKRELGSVNDF 289
Score = 42.0 bits (97), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 63/157 (40%), Gaps = 34/157 (21%)
Query: 32 WSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLS----KLTGLSGTGI 87
W + + P V++G+V + NG L A+N +GA+ W NL L G S
Sbjct: 143 WQTKVAGEALSRPVVSDGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPAT 202
Query: 88 VVNVTVA-----VVVAVSRSNGELVW---------STQIDPRPRSQITMSGSVYMGAFYV 133
V V AV G+++W ST+ID S + + V G +
Sbjct: 203 AFGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEID--RLSDVDTTPVVVNGVVF- 259
Query: 134 GLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYM 170
+ G+L LD+R+G+I+W+ +
Sbjct: 260 -------------ALAYNGNLTALDLRSGQIMWKREL 283
Score = 38.9 bits (89), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 61/131 (46%), Gaps = 19/131 (14%)
Query: 39 DISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG--LSGTGIVVNVTVAVV 96
D+ TP V NGVV+ ++NG L A++ +G ++W++ L + + G I + V
Sbjct: 246 DVDTTPVVVNGVVFALAYNGNLTALDLRSGQIMWKRELGSVNDFIVDGNRIYLVDQNDRV 305
Query: 97 VAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAK 156
+A++ G +W TQ D R + S +Y G VG S G L
Sbjct: 306 MALTIDGGVTLW-TQSDLLHR--LLTSPVLYDGNLVVGDS--------------EGYLHW 348
Query: 157 LDVRNGRIIWQ 167
++V +GR + Q
Sbjct: 349 INVEDGRFVAQ 359
>gi|238763553|ref|ZP_04624514.1| hypothetical protein ykris0001_7680 [Yersinia kristensenii ATCC
33638]
gi|238698185|gb|EEP90941.1| hypothetical protein ykris0001_7680 [Yersinia kristensenii ATCC
33638]
Length = 393
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 66/161 (40%), Gaps = 36/161 (22%)
Query: 29 RLRWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLS----KLTGLSG 84
++ W + + P V++GVV + NG L A+N +GA+ W NL L G S
Sbjct: 141 KVAWQTVVAGEALSRPVVSDGVVLIHTSNGMLQALNESDGAIKWTLNLDTPALSLRGESA 200
Query: 85 TGIVVNVTVA-----VVVAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLE 139
+ + V AV G+L+W +I SQ+T G + ++
Sbjct: 201 PTVAFGAAIVGGDNGRVSAVMMEQGQLIWQQRI-----SQVT------------GTTEID 243
Query: 140 EALPADQ----------CCTFRGSLAKLDVRNGRIIWQTYM 170
D + G+L LD+R+G+I+W+ M
Sbjct: 244 RLNDVDTTPVVVDGVVYALAYNGNLTALDLRSGQILWKREM 284
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 85/197 (43%), Gaps = 40/197 (20%)
Query: 51 VYFPSWNGYLYAVNAFNGALIWE-----QNLSKLTGLSGTGIVVNVTVAVVVAVSRSNGE 105
VY S +YA+N+ +G + W+ + LS+ G ++++ + ++ A++ S+G
Sbjct: 123 VYVGSEKAVVYALNSDDGKVAWQTVVAGEALSRPVVSDGV-VLIHTSNGMLQALNESDGA 181
Query: 106 LVWSTQIDPRPRSQITMSG-SVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRI 164
+ W+ +D S S +V GA VG + G ++ + + G++
Sbjct: 182 IKWTLNLDTPALSLRGESAPTVAFGAAIVGGDN--------------GRVSAVMMEQGQL 227
Query: 165 IWQTYMLPDNGGKRGGYSGAAVWGSSPAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSI 224
IWQ + G + ID + N+ T P D + + Y ++
Sbjct: 228 IWQQRISQVTG--------------TTEID-----RLNDVDTTPVVVDGVVYALAYNGNL 268
Query: 225 VALDIDSGRIAWAKPLG 241
ALD+ SG+I W + +G
Sbjct: 269 TALDLRSGQILWKREMG 285
>gi|292494159|ref|YP_003533302.1| PQQ enzyme repeat domain protein [Haloferax volcanii DS2]
gi|448289563|ref|ZP_21480733.1| PQQ enzyme repeat domain protein [Haloferax volcanii DS2]
gi|291369045|gb|ADE01275.1| PQQ enzyme repeat domain protein [Haloferax volcanii DS2]
gi|445582011|gb|ELY36357.1| PQQ enzyme repeat domain protein [Haloferax volcanii DS2]
Length = 419
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 30/49 (61%)
Query: 31 RWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKL 79
RWSF AG I TPA A+GVVY S++ +LYA++A G W + L
Sbjct: 110 RWSFEAGHRIEGTPAYADGVVYVGSYDKHLYALDAGTGEERWSRGFGGL 158
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 62/146 (42%), Gaps = 13/146 (8%)
Query: 30 LRWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTGLSGTGIVV 89
+ W+F AG +P VA+G VY S + LYA++A G W + + GT
Sbjct: 69 VEWTFEAGDAFWGSPIVADGTVYIGSADSALYALDAETGEERW--SFEAGHRIEGTPAYA 126
Query: 90 NVTVAV------VVAVSRSNGELVWSTQIDPRPRSQITM-SGSVYMGAFYVGLSSLEEAL 142
+ V V + A+ GE WS R T+ G+VY G VG +L A
Sbjct: 127 DGVVYVGSYDKHLYALDAGTGEERWSRGFGGLIRGSPTVWDGTVYTG---VGCHNLACAW 183
Query: 143 PADQC-CTFRGSLAKLDVRNGRIIWQ 167
A++ + G + LD G W+
Sbjct: 184 YAEEANVSETGWVYALDAETGETEWR 209
Score = 37.7 bits (86), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Query: 9 NNRRY-AYGEVLINPVTVRNLRLRWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFN 67
NNR Y + + ++ + W++ I ++PAVA G VYF WNG ++A +A
Sbjct: 224 NNRVYVGTSDEALYALSRSTGEVEWTYETRDMIWSSPAVAYGSVYFTDWNGNVHAADAAT 283
Query: 68 GALIW 72
G W
Sbjct: 284 GEQEW 288
>gi|209522393|ref|ZP_03271004.1| PQQ-dependent dehydrogenase, methanol/ethanol family [Burkholderia
sp. H160]
gi|209497172|gb|EDZ97416.1| PQQ-dependent dehydrogenase, methanol/ethanol family [Burkholderia
sp. H160]
Length = 605
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 77/359 (21%), Positives = 135/359 (37%), Gaps = 82/359 (22%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAG--KDISATPAVANGVVYFPS-WN 57
W GD N RY+ + IN V L++ W+ G + P V +Y S +
Sbjct: 39 WAAQAGDYANHRYSPLK-QINENNVGKLQVAWTMSTGVLRGHEGAPLVLGDTMYIHSPFP 97
Query: 58 GYLYAVNAFNGALIWE-------QNLSKLT------GLS-GTG-IVVNVTVAVVVAVSRS 102
+ A+N + +W+ Q +S + GL+ G G I + +VA++
Sbjct: 98 NKVIAINLKDQTFLWQYQPKQDDQVVSVMCCDTVNRGLAYGDGKIFLQQADTKLVALNAK 157
Query: 103 NGELVWSTQI-DPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRN 161
GE+VW+ Q +P+ T + V+ G+S E + RG L D++
Sbjct: 158 TGEVVWTAQNGNPKAGETNTNAPHVFGDKVLTGISGGEFGV--------RGRLIAYDIKT 209
Query: 162 GRIIWQTYML-PDN-----------------------------GGKRGGYSGAAVWGS-- 189
G+ +W Y PDN G + G WG
Sbjct: 210 GKPVWTAYSTGPDNEMLLDPQKTMTYSNGQMVPVGSDSSVKSWKGDQWKLGGGTTWGWYA 269
Query: 190 -SPAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYF 248
P ++++ N T PT Q + ++ SI A D+++G W ++
Sbjct: 270 WDPKLNLVYYGTGNPGTWNPT---QRPGDNKWSMSIFARDLNTGTAKW--------VYQM 318
Query: 249 TCLVPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
T P D D +L ++ NG+ +V ++GF + +R++G ++
Sbjct: 319 T----------PHDEWDYDGVNEMILSDLTINGKKVPAIVHFDRNGFGYTLNRETGQLL 367
>gi|375336913|ref|ZP_09778257.1| outer membrane assembly lipoprotein YfgL [Succinivibrionaceae
bacterium WG-1]
Length = 401
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 43/80 (53%), Gaps = 4/80 (5%)
Query: 40 ISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSK----LTGLSGTGIVVNVTVAV 95
+S + +G +Y P+ NGY+YA+NA +G L W+ N+ T + V +
Sbjct: 107 LSGGITLGDGYIYIPAENGYVYALNAEDGELYWKHNIGTEIIAATAYDYDKLYVMTSSGH 166
Query: 96 VVAVSRSNGELVWSTQIDPR 115
+ A++ SNGE +WST D +
Sbjct: 167 LYALNSSNGEEIWSTGNDSK 186
>gi|416898705|ref|ZP_11928251.1| outer membrane assembly lipoprotein YfgL [Escherichia coli STEC_7v]
gi|417115288|ref|ZP_11966424.1| outer membrane assembly lipoprotein YfgL [Escherichia coli 1.2741]
gi|422780587|ref|ZP_16833372.1| outer membrane assembly lipoprotein YfgL [Escherichia coli TW10509]
gi|422799825|ref|ZP_16848324.1| outer membrane assembly lipoprotein YfgL [Escherichia coli M863]
gi|323967960|gb|EGB63372.1| outer membrane assembly lipoprotein YfgL [Escherichia coli M863]
gi|323977305|gb|EGB72391.1| outer membrane assembly lipoprotein YfgL [Escherichia coli TW10509]
gi|327252219|gb|EGE63891.1| outer membrane assembly lipoprotein YfgL [Escherichia coli STEC_7v]
gi|386140707|gb|EIG81859.1| outer membrane assembly lipoprotein YfgL [Escherichia coli 1.2741]
Length = 392
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 94/226 (41%), Gaps = 24/226 (10%)
Query: 44 PAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG--------------LSGTGIVV 89
PA+A+ VVY G + A+NA +G IW +L++ G +SG + +
Sbjct: 65 PALADNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVSGGHVYI 124
Query: 90 NVTVAVVVAVSRSNGELVWSTQIDPRPRSQ-ITMSGSVYMGAFYVGLSSLEEALPADQCC 148
A V A++ S+G + W T++ S+ + G V + L +L EA A +
Sbjct: 125 GSEKAQVYALNTSDGTVAWQTKVAGEALSRPVVSDGLVLIHTSNGQLQALNEADGAVK-W 183
Query: 149 TFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYS------GAAVWGS--SPAIDVIRRQK 200
T + L +R + GG G S G +W S A +
Sbjct: 184 TVNLDMPSLSLRGESAPATAFGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDR 243
Query: 201 QNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIF 246
++ T P + + + Y ++ ALD+ SG+I W + LG + F
Sbjct: 244 LSDVDTTPVIVNGVVFALAYNGNLTALDLRSGQIMWKRELGSVNDF 289
Score = 41.6 bits (96), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 63/157 (40%), Gaps = 34/157 (21%)
Query: 32 WSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLS----KLTGLSGTGI 87
W + + P V++G+V + NG L A+N +GA+ W NL L G S
Sbjct: 143 WQTKVAGEALSRPVVSDGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPAT 202
Query: 88 VVNVTVA-----VVVAVSRSNGELVW---------STQIDPRPRSQITMSGSVYMGAFYV 133
V V AV G+++W ST+ID S + + + G +
Sbjct: 203 AFGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEID--RLSDVDTTPVIVNGVVF- 259
Query: 134 GLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYM 170
+ G+L LD+R+G+I+W+ +
Sbjct: 260 -------------ALAYNGNLTALDLRSGQIMWKREL 283
Score = 38.5 bits (88), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 61/131 (46%), Gaps = 19/131 (14%)
Query: 39 DISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG--LSGTGIVVNVTVAVV 96
D+ TP + NGVV+ ++NG L A++ +G ++W++ L + + G I + V
Sbjct: 246 DVDTTPVIVNGVVFALAYNGNLTALDLRSGQIMWKRELGSVNDFIVDGNRIYLVDQNDRV 305
Query: 97 VAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAK 156
+A++ G +W TQ D R + S +Y G VG S G L
Sbjct: 306 MALTIDGGVTLW-TQSDLLHR--LLTSPVLYNGNLVVGDS--------------EGYLHW 348
Query: 157 LDVRNGRIIWQ 167
++V +GR + Q
Sbjct: 349 INVEDGRFVAQ 359
>gi|422767161|ref|ZP_16820888.1| outer membrane assembly lipoprotein YfgL [Escherichia coli E1520]
gi|323936405|gb|EGB32695.1| outer membrane assembly lipoprotein YfgL [Escherichia coli E1520]
Length = 392
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 94/226 (41%), Gaps = 24/226 (10%)
Query: 44 PAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG--------------LSGTGIVV 89
PA+A+ VVY G + A+NA +G IW +L++ G +SG + +
Sbjct: 65 PALADNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVSGGHVYI 124
Query: 90 NVTVAVVVAVSRSNGELVWSTQIDPRPRSQ-ITMSGSVYMGAFYVGLSSLEEALPADQCC 148
A V A++ S+G + W T++ S+ + G V + L +L EA A +
Sbjct: 125 GSEKAQVYALNTSDGTVAWQTKVAGEALSRPVVSDGLVLIHTSNGQLQALNEADGAVK-W 183
Query: 149 TFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYS------GAAVWGS--SPAIDVIRRQK 200
T + L +R + GG G S G +W S A +
Sbjct: 184 TVNLDMPSLSLRGESAPATAFGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDR 243
Query: 201 QNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIF 246
++ T P + + + Y ++ ALD+ SG+I W + LG + F
Sbjct: 244 LSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQIMWKRELGSVNDF 289
Score = 42.0 bits (97), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 63/157 (40%), Gaps = 34/157 (21%)
Query: 32 WSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLS----KLTGLSGTGI 87
W + + P V++G+V + NG L A+N +GA+ W NL L G S
Sbjct: 143 WQTKVAGEALSRPVVSDGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPAT 202
Query: 88 VVNVTVA-----VVVAVSRSNGELVW---------STQIDPRPRSQITMSGSVYMGAFYV 133
V V AV G+++W ST+ID S + + V G +
Sbjct: 203 AFGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEID--RLSDVDTTPVVVNGVVF- 259
Query: 134 GLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYM 170
+ G+L LD+R+G+I+W+ +
Sbjct: 260 -------------ALAYNGNLTALDLRSGQIMWKREL 283
Score = 39.7 bits (91), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 63/131 (48%), Gaps = 19/131 (14%)
Query: 39 DISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG--LSGTGIVVNVTVAVV 96
D+ TP V NGVV+ ++NG L A++ +G ++W++ L + + G I + V
Sbjct: 246 DVDTTPVVVNGVVFALAYNGNLTALDLRSGQIMWKRELGSVNDFIVDGNRIYLVDQNDRV 305
Query: 97 VAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAK 156
+A++ G +W TQ D R Q+T S +Y G VG S G L
Sbjct: 306 MALTIDGGVTLW-TQSDLLHR-QLT-SPVLYNGNLVVGDS--------------EGYLHW 348
Query: 157 LDVRNGRIIWQ 167
++V +GR + Q
Sbjct: 349 INVEDGRFVAQ 359
>gi|416283492|ref|ZP_11646834.1| outer membrane protein assembly complex subunit YfgL [Shigella
boydii ATCC 9905]
gi|417690636|ref|ZP_12339856.1| outer membrane assembly lipoprotein YfgL [Shigella boydii 5216-82]
gi|320180502|gb|EFW55433.1| outer membrane protein assembly complex subunit YfgL [Shigella
boydii ATCC 9905]
gi|332087959|gb|EGI93084.1| outer membrane assembly lipoprotein YfgL [Shigella boydii 5216-82]
Length = 392
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 94/226 (41%), Gaps = 24/226 (10%)
Query: 44 PAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG--------------LSGTGIVV 89
PA+A+ VVY G + A+NA +G IW +L++ G +SG + +
Sbjct: 65 PALADNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVSGGHVYI 124
Query: 90 NVTVAVVVAVSRSNGELVWSTQIDPRPRSQ-ITMSGSVYMGAFYVGLSSLEEALPADQCC 148
A V A++ S+G + W T++ S+ + G V + L +L EA A +
Sbjct: 125 GSEKAQVYALNTSDGTVAWQTKVAGEALSRPVVSDGLVLIHTSNGQLQALNEADGAVK-W 183
Query: 149 TFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYS------GAAVWGS--SPAIDVIRRQK 200
T + L +R + GG G S G +W S A +
Sbjct: 184 TVNLDMPSLSLRGESAPATAFGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDR 243
Query: 201 QNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIF 246
++ T P + + + Y ++ ALD+ SG+I W + LG + F
Sbjct: 244 LSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQIMWKRELGSVNDF 289
Score = 42.0 bits (97), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 63/157 (40%), Gaps = 34/157 (21%)
Query: 32 WSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLS----KLTGLSGTGI 87
W + + P V++G+V + NG L A+N +GA+ W NL L G S
Sbjct: 143 WQTKVAGEALSRPVVSDGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPAT 202
Query: 88 VVNVTVA-----VVVAVSRSNGELVW---------STQIDPRPRSQITMSGSVYMGAFYV 133
V V AV G+++W ST+ID S + + V G +
Sbjct: 203 AFGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEID--RLSDVDTTPVVVNGVVF- 259
Query: 134 GLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYM 170
+ G+L LD+R+G+I+W+ +
Sbjct: 260 -------------ALAYNGNLTALDLRSGQIMWKREL 283
>gi|218555037|ref|YP_002387950.1| outer membrane protein assembly complex subunit YfgL [Escherichia
coli IAI1]
gi|218696139|ref|YP_002403806.1| outer membrane protein assembly complex subunit YfgL [Escherichia
coli 55989]
gi|260856606|ref|YP_003230497.1| outer membrane protein assembly complex subunit YfgL [Escherichia
coli O26:H11 str. 11368]
gi|260869201|ref|YP_003235603.1| protein assembly complex, lipoprotein component [Escherichia coli
O111:H- str. 11128]
gi|300817718|ref|ZP_07097933.1| outer membrane assembly lipoprotein YfgL [Escherichia coli MS
107-1]
gi|407470408|ref|YP_006783149.1| outer membrane biogenesis protein BamB [Escherichia coli O104:H4
str. 2009EL-2071]
gi|407480930|ref|YP_006778079.1| outer membrane biogenesis protein BamB [Escherichia coli O104:H4
str. 2011C-3493]
gi|410481496|ref|YP_006769042.1| outer membrane biogenesis protein BamB [Escherichia coli O104:H4
str. 2009EL-2050]
gi|415784562|ref|ZP_11492383.1| outer membrane assembly lipoprotein YfgL [Escherichia coli EPECa14]
gi|415822431|ref|ZP_11511059.1| outer membrane assembly lipoprotein YfgL [Escherichia coli OK1180]
gi|415828723|ref|ZP_11515195.1| outer membrane assembly lipoprotein YfgL [Escherichia coli OK1357]
gi|415874037|ref|ZP_11541179.1| outer membrane assembly lipoprotein YfgL [Escherichia coli MS
79-10]
gi|417133966|ref|ZP_11978751.1| outer membrane assembly lipoprotein YfgL [Escherichia coli 5.0588]
gi|417146208|ref|ZP_11987166.1| outer membrane assembly lipoprotein YfgL [Escherichia coli 1.2264]
gi|417154866|ref|ZP_11992995.1| outer membrane assembly lipoprotein YfgL [Escherichia coli 96.0497]
gi|417188984|ref|ZP_12012542.1| outer membrane assembly lipoprotein YfgL [Escherichia coli 4.0522]
gi|417207658|ref|ZP_12019879.1| outer membrane assembly lipoprotein YfgL [Escherichia coli JB1-95]
gi|417232032|ref|ZP_12033430.1| outer membrane assembly lipoprotein YfgL [Escherichia coli 5.0959]
gi|417237762|ref|ZP_12035493.1| outer membrane assembly lipoprotein YfgL [Escherichia coli 9.0111]
gi|417300058|ref|ZP_12087285.1| outer membrane assembly lipoprotein YfgL [Escherichia coli 900105
(10e)]
gi|417582015|ref|ZP_12232817.1| outer membrane assembly lipoprotein YfgL [Escherichia coli
STEC_B2F1]
gi|417592847|ref|ZP_12243542.1| outer membrane assembly lipoprotein YfgL [Escherichia coli 2534-86]
gi|417667914|ref|ZP_12317459.1| outer membrane assembly lipoprotein YfgL [Escherichia coli
STEC_O31]
gi|417806063|ref|ZP_12453009.1| outer membrane biogenesis protein BamB [Escherichia coli O104:H4
str. LB226692]
gi|417833806|ref|ZP_12480253.1| outer membrane biogenesis protein BamB [Escherichia coli O104:H4
str. 01-09591]
gi|417863149|ref|ZP_12508197.1| hypothetical protein C22711_0082 [Escherichia coli O104:H4 str.
C227-11]
gi|419198012|ref|ZP_13741398.1| outer membrane assembly lipoprotein YfgL [Escherichia coli DEC8A]
gi|419204506|ref|ZP_13747686.1| outer membrane assembly lipoprotein YfgL [Escherichia coli DEC8B]
gi|419210741|ref|ZP_13753818.1| outer membrane assembly lipoprotein YfgL [Escherichia coli DEC8C]
gi|419216602|ref|ZP_13759601.1| outer membrane assembly lipoprotein YfgL [Escherichia coli DEC8D]
gi|419222521|ref|ZP_13765442.1| outer membrane assembly lipoprotein YfgL [Escherichia coli DEC8E]
gi|419227867|ref|ZP_13770718.1| outer membrane assembly lipoprotein YfgL [Escherichia coli DEC9A]
gi|419233328|ref|ZP_13776103.1| outer membrane assembly lipoprotein YfgL [Escherichia coli DEC9B]
gi|419238880|ref|ZP_13781595.1| outer membrane assembly lipoprotein YfgL [Escherichia coli DEC9C]
gi|419244357|ref|ZP_13786995.1| outer membrane assembly lipoprotein YfgL [Escherichia coli DEC9D]
gi|419250168|ref|ZP_13792747.1| outer membrane assembly lipoprotein YfgL [Escherichia coli DEC9E]
gi|419255994|ref|ZP_13798507.1| outer membrane assembly lipoprotein YfgL [Escherichia coli DEC10A]
gi|419262304|ref|ZP_13804718.1| outer membrane assembly lipoprotein YfgL [Escherichia coli DEC10B]
gi|419267947|ref|ZP_13810299.1| outer membrane assembly lipoprotein YfgL [Escherichia coli DEC10C]
gi|419273744|ref|ZP_13816039.1| outer membrane assembly lipoprotein YfgL [Escherichia coli DEC10D]
gi|419285212|ref|ZP_13827383.1| outer membrane assembly lipoprotein YfgL [Escherichia coli DEC10F]
gi|419803533|ref|ZP_14328703.1| outer membrane assembly lipoprotein YfgL [Escherichia coli AI27]
gi|419878640|ref|ZP_14400104.1| outer membrane biogenesis protein BamB [Escherichia coli O111:H11
str. CVM9534]
gi|419885688|ref|ZP_14406376.1| outer membrane biogenesis protein BamB [Escherichia coli O111:H11
str. CVM9545]
gi|419887603|ref|ZP_14408177.1| outer membrane biogenesis protein BamB [Escherichia coli O111:H8
str. CVM9570]
gi|419894064|ref|ZP_14414004.1| outer membrane biogenesis protein BamB [Escherichia coli O111:H8
str. CVM9574]
gi|419899545|ref|ZP_14419048.1| outer membrane biogenesis protein BamB [Escherichia coli O26:H11
str. CVM9942]
gi|419906604|ref|ZP_14425494.1| protein assembly complex, lipoprotein component [Escherichia coli
O26:H11 str. CVM10026]
gi|420087418|ref|ZP_14599388.1| outer membrane biogenesis protein BamB [Escherichia coli O111:H8
str. CVM9602]
gi|420097595|ref|ZP_14608890.1| outer membrane biogenesis protein BamB [Escherichia coli O111:H8
str. CVM9634]
gi|420105082|ref|ZP_14615663.1| outer membrane biogenesis protein BamB [Escherichia coli O111:H11
str. CVM9455]
gi|420111505|ref|ZP_14621336.1| outer membrane biogenesis protein BamB [Escherichia coli O111:H11
str. CVM9553]
gi|420119927|ref|ZP_14629170.1| outer membrane biogenesis protein BamB [Escherichia coli O26:H11
str. CVM10030]
gi|420124628|ref|ZP_14633475.1| outer membrane biogenesis protein BamB [Escherichia coli O26:H11
str. CVM10224]
gi|420134519|ref|ZP_14642624.1| outer membrane biogenesis protein BamB [Escherichia coli O26:H11
str. CVM9952]
gi|422761956|ref|ZP_16815713.1| outer membrane assembly lipoprotein YfgL [Escherichia coli E1167]
gi|422988638|ref|ZP_16979411.1| lipoprotein yfgL [Escherichia coli O104:H4 str. C227-11]
gi|422995530|ref|ZP_16986294.1| lipoprotein yfgL [Escherichia coli O104:H4 str. C236-11]
gi|423000675|ref|ZP_16991429.1| lipoprotein yfgL [Escherichia coli O104:H4 str. 09-7901]
gi|423004347|ref|ZP_16995093.1| lipoprotein yfgL [Escherichia coli O104:H4 str. 04-8351]
gi|423010847|ref|ZP_17001581.1| lipoprotein yfgL [Escherichia coli O104:H4 str. 11-3677]
gi|423020075|ref|ZP_17010784.1| lipoprotein yfgL [Escherichia coli O104:H4 str. 11-4404]
gi|423025241|ref|ZP_17015938.1| lipoprotein yfgL [Escherichia coli O104:H4 str. 11-4522]
gi|423031061|ref|ZP_17021749.1| lipoprotein yfgL [Escherichia coli O104:H4 str. 11-4623]
gi|423038887|ref|ZP_17029561.1| lipoprotein yfgL [Escherichia coli O104:H4 str. 11-4632 C1]
gi|423044007|ref|ZP_17034674.1| lipoprotein yfgL [Escherichia coli O104:H4 str. 11-4632 C2]
gi|423045735|ref|ZP_17036395.1| lipoprotein yfgL [Escherichia coli O104:H4 str. 11-4632 C3]
gi|423054274|ref|ZP_17043081.1| lipoprotein yfgL [Escherichia coli O104:H4 str. 11-4632 C4]
gi|423061249|ref|ZP_17050045.1| lipoprotein yfgL [Escherichia coli O104:H4 str. 11-4632 C5]
gi|424754450|ref|ZP_18182364.1| outer membrane biogenesis protein BamB [Escherichia coli O26:H11
str. CFSAN001629]
gi|424764623|ref|ZP_18192042.1| outer membrane biogenesis protein BamB [Escherichia coli O111:H11
str. CFSAN001630]
gi|424772062|ref|ZP_18199177.1| outer membrane biogenesis protein BamB [Escherichia coli O111:H8
str. CFSAN001632]
gi|425380688|ref|ZP_18764705.1| outer membrane assembly lipoprotein YfgL [Escherichia coli EC1865]
gi|429720102|ref|ZP_19255031.1| lipoprotein yfgL [Escherichia coli O104:H4 str. Ec11-9450]
gi|429772003|ref|ZP_19304024.1| lipoprotein yfgL [Escherichia coli O104:H4 str. 11-02030]
gi|429776948|ref|ZP_19308924.1| lipoprotein yfgL [Escherichia coli O104:H4 str. 11-02033-1]
gi|429785675|ref|ZP_19317571.1| lipoprotein yfgL [Escherichia coli O104:H4 str. 11-02092]
gi|429791565|ref|ZP_19323420.1| lipoprotein yfgL [Escherichia coli O104:H4 str. 11-02093]
gi|429792413|ref|ZP_19324263.1| lipoprotein yfgL [Escherichia coli O104:H4 str. 11-02281]
gi|429798989|ref|ZP_19330788.1| lipoprotein yfgL [Escherichia coli O104:H4 str. 11-02318]
gi|429807502|ref|ZP_19339227.1| lipoprotein yfgL [Escherichia coli O104:H4 str. 11-02913]
gi|429812402|ref|ZP_19344086.1| lipoprotein yfgL [Escherichia coli O104:H4 str. 11-03439]
gi|429817923|ref|ZP_19349562.1| lipoprotein yfgL [Escherichia coli O104:H4 str. 11-04080]
gi|429823135|ref|ZP_19354730.1| lipoprotein yfgL [Escherichia coli O104:H4 str. 11-03943]
gi|429904510|ref|ZP_19370489.1| lipoprotein yfgL [Escherichia coli O104:H4 str. Ec11-9990]
gi|429908648|ref|ZP_19374612.1| lipoprotein yfgL [Escherichia coli O104:H4 str. Ec11-9941]
gi|429914519|ref|ZP_19380467.1| lipoprotein yfgL [Escherichia coli O104:H4 str. Ec11-4984]
gi|429919549|ref|ZP_19385481.1| lipoprotein yfgL [Escherichia coli O104:H4 str. Ec11-5604]
gi|429925369|ref|ZP_19391283.1| lipoprotein yfgL [Escherichia coli O104:H4 str. Ec11-4986]
gi|429929306|ref|ZP_19395208.1| lipoprotein yfgL [Escherichia coli O104:H4 str. Ec11-4987]
gi|429935845|ref|ZP_19401731.1| lipoprotein yfgL [Escherichia coli O104:H4 str. Ec11-4988]
gi|429941525|ref|ZP_19407399.1| lipoprotein yfgL [Escherichia coli O104:H4 str. Ec11-5603]
gi|429944205|ref|ZP_19410068.1| lipoprotein yfgL [Escherichia coli O104:H4 str. Ec11-6006]
gi|429951764|ref|ZP_19417610.1| lipoprotein yfgL [Escherichia coli O104:H4 str. Ec12-0465]
gi|429955113|ref|ZP_19420945.1| lipoprotein yfgL [Escherichia coli O104:H4 str. Ec12-0466]
gi|432481862|ref|ZP_19723817.1| lipoprotein yfgL [Escherichia coli KTE210]
gi|432806692|ref|ZP_20040620.1| lipoprotein yfgL [Escherichia coli KTE91]
gi|432935409|ref|ZP_20134763.1| lipoprotein yfgL [Escherichia coli KTE184]
gi|433194569|ref|ZP_20378555.1| lipoprotein yfgL [Escherichia coli KTE90]
gi|218352871|emb|CAU98670.1| protein assembly complex, lipoprotein component [Escherichia coli
55989]
gi|218361805|emb|CAQ99404.1| protein assembly complex, lipoprotein component [Escherichia coli
IAI1]
gi|257755255|dbj|BAI26757.1| protein assembly complex, lipoprotein component [Escherichia coli
O26:H11 str. 11368]
gi|257765557|dbj|BAI37052.1| protein assembly complex, lipoprotein component [Escherichia coli
O111:H- str. 11128]
gi|300529706|gb|EFK50768.1| outer membrane assembly lipoprotein YfgL [Escherichia coli MS
107-1]
gi|323156166|gb|EFZ42325.1| outer membrane assembly lipoprotein YfgL [Escherichia coli EPECa14]
gi|323177364|gb|EFZ62952.1| outer membrane assembly lipoprotein YfgL [Escherichia coli OK1180]
gi|323184427|gb|EFZ69802.1| outer membrane assembly lipoprotein YfgL [Escherichia coli OK1357]
gi|324118144|gb|EGC12041.1| outer membrane assembly lipoprotein YfgL [Escherichia coli E1167]
gi|340733450|gb|EGR62581.1| outer membrane biogenesis protein BamB [Escherichia coli O104:H4
str. 01-09591]
gi|340739358|gb|EGR73593.1| outer membrane biogenesis protein BamB [Escherichia coli O104:H4
str. LB226692]
gi|341916438|gb|EGT66055.1| hypothetical protein C22711_0082 [Escherichia coli O104:H4 str.
C227-11]
gi|342930485|gb|EGU99207.1| outer membrane assembly lipoprotein YfgL [Escherichia coli MS
79-10]
gi|345337022|gb|EGW69455.1| outer membrane assembly lipoprotein YfgL [Escherichia coli 2534-86]
gi|345337786|gb|EGW70218.1| outer membrane assembly lipoprotein YfgL [Escherichia coli
STEC_B2F1]
gi|354862365|gb|EHF22803.1| lipoprotein yfgL [Escherichia coli O104:H4 str. C236-11]
gi|354867649|gb|EHF28071.1| lipoprotein yfgL [Escherichia coli O104:H4 str. C227-11]
gi|354868750|gb|EHF29163.1| lipoprotein yfgL [Escherichia coli O104:H4 str. 04-8351]
gi|354873646|gb|EHF34023.1| lipoprotein yfgL [Escherichia coli O104:H4 str. 09-7901]
gi|354880330|gb|EHF40666.1| lipoprotein yfgL [Escherichia coli O104:H4 str. 11-3677]
gi|354889119|gb|EHF49372.1| lipoprotein yfgL [Escherichia coli O104:H4 str. 11-4404]
gi|354893349|gb|EHF53553.1| lipoprotein yfgL [Escherichia coli O104:H4 str. 11-4522]
gi|354894300|gb|EHF54496.1| lipoprotein yfgL [Escherichia coli O104:H4 str. 11-4632 C1]
gi|354897092|gb|EHF57253.1| lipoprotein yfgL [Escherichia coli O104:H4 str. 11-4623]
gi|354898456|gb|EHF58610.1| lipoprotein yfgL [Escherichia coli O104:H4 str. 11-4632 C2]
gi|354912224|gb|EHF72225.1| lipoprotein yfgL [Escherichia coli O104:H4 str. 11-4632 C5]
gi|354915180|gb|EHF75160.1| lipoprotein yfgL [Escherichia coli O104:H4 str. 11-4632 C3]
gi|354917414|gb|EHF77380.1| lipoprotein yfgL [Escherichia coli O104:H4 str. 11-4632 C4]
gi|378046569|gb|EHW08948.1| outer membrane assembly lipoprotein YfgL [Escherichia coli DEC8A]
gi|378047627|gb|EHW09989.1| outer membrane assembly lipoprotein YfgL [Escherichia coli DEC8B]
gi|378053437|gb|EHW15737.1| outer membrane assembly lipoprotein YfgL [Escherichia coli DEC8C]
gi|378060793|gb|EHW22981.1| outer membrane assembly lipoprotein YfgL [Escherichia coli DEC8D]
gi|378065096|gb|EHW27246.1| outer membrane assembly lipoprotein YfgL [Escherichia coli DEC8E]
gi|378073265|gb|EHW35318.1| outer membrane assembly lipoprotein YfgL [Escherichia coli DEC9A]
gi|378076387|gb|EHW38391.1| outer membrane assembly lipoprotein YfgL [Escherichia coli DEC9B]
gi|378083919|gb|EHW45850.1| outer membrane assembly lipoprotein YfgL [Escherichia coli DEC9C]
gi|378090293|gb|EHW52133.1| outer membrane assembly lipoprotein YfgL [Escherichia coli DEC9D]
gi|378094143|gb|EHW55945.1| outer membrane assembly lipoprotein YfgL [Escherichia coli DEC9E]
gi|378099460|gb|EHW61166.1| outer membrane assembly lipoprotein YfgL [Escherichia coli DEC10A]
gi|378104984|gb|EHW66632.1| outer membrane assembly lipoprotein YfgL [Escherichia coli DEC10B]
gi|378110598|gb|EHW72192.1| outer membrane assembly lipoprotein YfgL [Escherichia coli DEC10C]
gi|378116231|gb|EHW77764.1| outer membrane assembly lipoprotein YfgL [Escherichia coli DEC10D]
gi|378130556|gb|EHW91920.1| outer membrane assembly lipoprotein YfgL [Escherichia coli DEC10F]
gi|384473445|gb|EIE57486.1| outer membrane assembly lipoprotein YfgL [Escherichia coli AI27]
gi|386151820|gb|EIH03109.1| outer membrane assembly lipoprotein YfgL [Escherichia coli 5.0588]
gi|386163660|gb|EIH25455.1| outer membrane assembly lipoprotein YfgL [Escherichia coli 1.2264]
gi|386167955|gb|EIH34471.1| outer membrane assembly lipoprotein YfgL [Escherichia coli 96.0497]
gi|386192529|gb|EIH81253.1| outer membrane assembly lipoprotein YfgL [Escherichia coli 4.0522]
gi|386196972|gb|EIH91180.1| outer membrane assembly lipoprotein YfgL [Escherichia coli JB1-95]
gi|386205031|gb|EII09542.1| outer membrane assembly lipoprotein YfgL [Escherichia coli 5.0959]
gi|386213540|gb|EII23965.1| outer membrane assembly lipoprotein YfgL [Escherichia coli 9.0111]
gi|386256893|gb|EIJ12387.1| outer membrane assembly lipoprotein YfgL [Escherichia coli 900105
(10e)]
gi|388334445|gb|EIL01036.1| outer membrane biogenesis protein BamB [Escherichia coli O111:H11
str. CVM9534]
gi|388348464|gb|EIL14059.1| outer membrane biogenesis protein BamB [Escherichia coli O111:H11
str. CVM9545]
gi|388362471|gb|EIL26478.1| outer membrane biogenesis protein BamB [Escherichia coli O111:H8
str. CVM9570]
gi|388365270|gb|EIL29073.1| outer membrane biogenesis protein BamB [Escherichia coli O111:H8
str. CVM9574]
gi|388378698|gb|EIL41412.1| protein assembly complex, lipoprotein component [Escherichia coli
O26:H11 str. CVM10026]
gi|388379682|gb|EIL42329.1| outer membrane biogenesis protein BamB [Escherichia coli O26:H11
str. CVM9942]
gi|394383757|gb|EJE61344.1| outer membrane biogenesis protein BamB [Escherichia coli O111:H8
str. CVM9634]
gi|394393289|gb|EJE69978.1| outer membrane biogenesis protein BamB [Escherichia coli O111:H8
str. CVM9602]
gi|394396704|gb|EJE73036.1| outer membrane biogenesis protein BamB [Escherichia coli O26:H11
str. CVM10224]
gi|394398238|gb|EJE74426.1| outer membrane biogenesis protein BamB [Escherichia coli O111:H11
str. CVM9553]
gi|394400234|gb|EJE76170.1| outer membrane biogenesis protein BamB [Escherichia coli O111:H11
str. CVM9455]
gi|394421289|gb|EJE94765.1| outer membrane biogenesis protein BamB [Escherichia coli O26:H11
str. CVM9952]
gi|394430595|gb|EJF02909.1| outer membrane biogenesis protein BamB [Escherichia coli O26:H11
str. CVM10030]
gi|397785060|gb|EJK95913.1| outer membrane assembly lipoprotein YfgL [Escherichia coli
STEC_O31]
gi|406776658|gb|AFS56082.1| outer membrane biogenesis protein BamB [Escherichia coli O104:H4
str. 2009EL-2050]
gi|407053227|gb|AFS73278.1| outer membrane biogenesis protein BamB [Escherichia coli O104:H4
str. 2011C-3493]
gi|407066443|gb|AFS87490.1| outer membrane biogenesis protein BamB [Escherichia coli O104:H4
str. 2009EL-2071]
gi|408295559|gb|EKJ13864.1| outer membrane assembly lipoprotein YfgL [Escherichia coli EC1865]
gi|421933097|gb|EKT90891.1| outer membrane biogenesis protein BamB [Escherichia coli O26:H11
str. CFSAN001629]
gi|421937589|gb|EKT95198.1| outer membrane biogenesis protein BamB [Escherichia coli O111:H11
str. CFSAN001630]
gi|421939050|gb|EKT96581.1| outer membrane biogenesis protein BamB [Escherichia coli O111:H8
str. CFSAN001632]
gi|429348253|gb|EKY85023.1| lipoprotein yfgL [Escherichia coli O104:H4 str. 11-02092]
gi|429358999|gb|EKY95665.1| lipoprotein yfgL [Escherichia coli O104:H4 str. 11-02030]
gi|429361330|gb|EKY97985.1| lipoprotein yfgL [Escherichia coli O104:H4 str. 11-02093]
gi|429361637|gb|EKY98290.1| lipoprotein yfgL [Escherichia coli O104:H4 str. 11-02033-1]
gi|429364277|gb|EKZ00897.1| lipoprotein yfgL [Escherichia coli O104:H4 str. 11-02318]
gi|429375126|gb|EKZ11664.1| lipoprotein yfgL [Escherichia coli O104:H4 str. 11-02913]
gi|429376283|gb|EKZ12812.1| lipoprotein yfgL [Escherichia coli O104:H4 str. 11-02281]
gi|429378592|gb|EKZ15100.1| lipoprotein yfgL [Escherichia coli O104:H4 str. 11-03439]
gi|429379456|gb|EKZ15956.1| lipoprotein yfgL [Escherichia coli O104:H4 str. 11-03943]
gi|429391159|gb|EKZ27564.1| lipoprotein yfgL [Escherichia coli O104:H4 str. 11-04080]
gi|429405523|gb|EKZ41789.1| lipoprotein yfgL [Escherichia coli O104:H4 str. Ec11-4984]
gi|429406059|gb|EKZ42320.1| lipoprotein yfgL [Escherichia coli O104:H4 str. Ec11-9990]
gi|429409964|gb|EKZ46189.1| lipoprotein yfgL [Escherichia coli O104:H4 str. Ec11-9450]
gi|429413876|gb|EKZ50056.1| lipoprotein yfgL [Escherichia coli O104:H4 str. Ec11-4987]
gi|429420654|gb|EKZ56779.1| lipoprotein yfgL [Escherichia coli O104:H4 str. Ec11-4986]
gi|429428826|gb|EKZ64901.1| lipoprotein yfgL [Escherichia coli O104:H4 str. Ec11-5604]
gi|429432379|gb|EKZ68419.1| lipoprotein yfgL [Escherichia coli O104:H4 str. Ec11-4988]
gi|429436585|gb|EKZ72601.1| lipoprotein yfgL [Escherichia coli O104:H4 str. Ec11-5603]
gi|429438790|gb|EKZ74783.1| lipoprotein yfgL [Escherichia coli O104:H4 str. Ec11-6006]
gi|429447159|gb|EKZ83083.1| lipoprotein yfgL [Escherichia coli O104:H4 str. Ec12-0465]
gi|429451412|gb|EKZ87303.1| lipoprotein yfgL [Escherichia coli O104:H4 str. Ec11-9941]
gi|429458070|gb|EKZ93908.1| lipoprotein yfgL [Escherichia coli O104:H4 str. Ec12-0466]
gi|431006384|gb|ELD21390.1| lipoprotein yfgL [Escherichia coli KTE210]
gi|431354834|gb|ELG41560.1| lipoprotein yfgL [Escherichia coli KTE91]
gi|431452192|gb|ELH32641.1| lipoprotein yfgL [Escherichia coli KTE184]
gi|431715069|gb|ELJ79238.1| lipoprotein yfgL [Escherichia coli KTE90]
Length = 392
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 95/226 (42%), Gaps = 24/226 (10%)
Query: 44 PAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG--------------LSGTGIVV 89
PA+A+ VVY G + A+NA +G IW +L++ G +SG + +
Sbjct: 65 PALADNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGLTVSGGHVYI 124
Query: 90 NVTVAVVVAVSRSNGELVWSTQIDPRPRSQITMS-GSVYMGAFYVGLSSLEEALPADQCC 148
A V A++ S+G + W T++ S+ +S G V + L +L EA A +
Sbjct: 125 GSEKAQVYALNTSDGTVAWQTKVAGEALSRPVVSDGLVLIHTSNGQLQALNEADGAVK-W 183
Query: 149 TFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYS------GAAVWGS--SPAIDVIRRQK 200
T + L +R + GG G S G +W S A +
Sbjct: 184 TVNLDMPSLSLRGESAPATAFGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDR 243
Query: 201 QNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIF 246
++ T P + + + Y ++ ALD+ SG+I W + LG + F
Sbjct: 244 LSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQIMWKRELGSVNDF 289
Score = 42.0 bits (97), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 63/157 (40%), Gaps = 34/157 (21%)
Query: 32 WSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLS----KLTGLSGTGI 87
W + + P V++G+V + NG L A+N +GA+ W NL L G S
Sbjct: 143 WQTKVAGEALSRPVVSDGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPAT 202
Query: 88 VVNVTVA-----VVVAVSRSNGELVW---------STQIDPRPRSQITMSGSVYMGAFYV 133
V V AV G+++W ST+ID S + + V G +
Sbjct: 203 AFGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEID--RLSDVDTTPVVVNGVVF- 259
Query: 134 GLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYM 170
+ G+L LD+R+G+I+W+ +
Sbjct: 260 -------------ALAYNGNLTALDLRSGQIMWKREL 283
Score = 38.9 bits (89), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 61/131 (46%), Gaps = 19/131 (14%)
Query: 39 DISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG--LSGTGIVVNVTVAVV 96
D+ TP V NGVV+ ++NG L A++ +G ++W++ L + + G I + V
Sbjct: 246 DVDTTPVVVNGVVFALAYNGNLTALDLRSGQIMWKRELGSVNDFIVDGNRIYLVDQNDRV 305
Query: 97 VAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAK 156
+A++ G +W TQ D R + S +Y G VG S G L
Sbjct: 306 MALTIDGGVTLW-TQSDLLHR--LLTSPVLYNGNLVVGDS--------------EGYLHW 348
Query: 157 LDVRNGRIIWQ 167
++V +GR + Q
Sbjct: 349 INVEDGRFVAQ 359
>gi|334145200|ref|YP_004538410.1| alcohol dehydrogenase [Novosphingobium sp. PP1Y]
gi|333937084|emb|CCA90443.1| alcohol dehydrogenase [Novosphingobium sp. PP1Y]
Length = 704
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 80/331 (24%), Positives = 125/331 (37%), Gaps = 73/331 (22%)
Query: 20 INPVTVRNLRLRWSFYAGKDISAT-PAVANGVVYFPSWNGYLYAVNAFNGALIW------ 72
IN V L L WS AT P +G VY S + A++ G + W
Sbjct: 61 INDGNVDQLGLAWSVDLPPGNPATGPIEVDGTVYLASGYSVVRAIDVETGKVKWTYDPRA 120
Query: 73 -EQNLSKL-TGLSGTGI------VVNVTV-AVVVAVSRSNGELVWSTQI----DPRPRSQ 119
E + KL G GI V+ T ++A+ G+ VW+ + DP
Sbjct: 121 PEASGIKLRQGWGSRGIAYWNHKVITATQDGRLIAIDEKTGKPVWTAETFGKDDP----- 175
Query: 120 ITMSG--SVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYMLP----- 172
+ +SG V+ G +G +E+ RG + D G+ +W+ Y +P
Sbjct: 176 LFISGPPRVFDGKVIIGNGGSDES-------PVRGFVTAWDADTGKFLWKFYTVPGNPAD 228
Query: 173 ---DNGGKRGGYSGAAVW----GSSPAIDVIRRQKQNNQTTKPT-------HPDQCISS- 217
DN K + + W G + I K N+Q T H + + +
Sbjct: 229 GFEDNAMKMAAKTWSGDWWNYGGGGSVWNAITYDKANDQILIGTGNGAPWNHKIRSMGNG 288
Query: 218 -DIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLT 276
+++ SIVALD +G+ W Y I PG + D + L
Sbjct: 289 DNLFVCSIVALDAKTGKYKWH-----YQIN-------------PGESWDFNASMDMELAD 330
Query: 277 ISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
+ +G+ R VV+ K+GF + DR G +I
Sbjct: 331 LEIDGKPRQVVMTAPKNGFFYVIDRKDGKLI 361
>gi|420337231|ref|ZP_14838797.1| outer membrane assembly lipoprotein YfgL [Shigella flexneri K-315]
gi|391260109|gb|EIQ19174.1| outer membrane assembly lipoprotein YfgL [Shigella flexneri K-315]
Length = 392
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 94/226 (41%), Gaps = 24/226 (10%)
Query: 44 PAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG--------------LSGTGIVV 89
PA+A+ VVY G + A+NA +G IW +L++ G +SG + +
Sbjct: 65 PALADNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVSGGHVYI 124
Query: 90 NVTVAVVVAVSRSNGELVWSTQIDPRPRSQ-ITMSGSVYMGAFYVGLSSLEEALPADQCC 148
A V A++ S+G + W T++ S+ + G V + L +L EA A +
Sbjct: 125 GSEKAQVYALNTSDGTVAWQTKVAGEALSRPVVSDGLVLIHTSNGQLQALNEADGAVK-W 183
Query: 149 TFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYS------GAAVWGS--SPAIDVIRRQK 200
T + L +R + GG G S G +W S A +
Sbjct: 184 TVNLDMPSLSLRGESAPATAFGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDR 243
Query: 201 QNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIF 246
++ T P + + + Y ++ ALD+ SG+I W + LG + F
Sbjct: 244 LSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQIMWKRELGSVNDF 289
Score = 42.0 bits (97), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 63/157 (40%), Gaps = 34/157 (21%)
Query: 32 WSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLS----KLTGLSGTGI 87
W + + P V++G+V + NG L A+N +GA+ W NL L G S
Sbjct: 143 WQTKVAGEALSRPVVSDGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPAT 202
Query: 88 VVNVTVA-----VVVAVSRSNGELVW---------STQIDPRPRSQITMSGSVYMGAFYV 133
V V AV G+++W ST+ID S + + V G +
Sbjct: 203 AFGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEID--RLSDVDTTPVVVNGVVF- 259
Query: 134 GLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYM 170
+ G+L LD+R+G+I+W+ +
Sbjct: 260 -------------ALAYNGNLTALDLRSGQIMWKREL 283
Score = 38.9 bits (89), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 61/131 (46%), Gaps = 19/131 (14%)
Query: 39 DISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG--LSGTGIVVNVTVAVV 96
D+ TP V NGVV+ ++NG L A++ +G ++W++ L + + G I + V
Sbjct: 246 DVDTTPVVVNGVVFALAYNGNLTALDLRSGQIMWKRELGSVNDFIVDGNRIYLVDQNDRV 305
Query: 97 VAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAK 156
+A++ G +W TQ D R + S +Y G VG S G L
Sbjct: 306 MALTIDGGVTLW-TQSDLLHR--LLTSPVLYDGNLVVGDS--------------EGYLHW 348
Query: 157 LDVRNGRIIWQ 167
++V +GR + Q
Sbjct: 349 INVEDGRFVAQ 359
>gi|300904314|ref|ZP_07122171.1| outer membrane assembly lipoprotein YfgL [Escherichia coli MS 84-1]
gi|301302869|ref|ZP_07208997.1| outer membrane assembly lipoprotein YfgL [Escherichia coli MS
124-1]
gi|415862460|ref|ZP_11535926.1| outer membrane assembly lipoprotein YfgL [Escherichia coli MS 85-1]
gi|300403746|gb|EFJ87284.1| outer membrane assembly lipoprotein YfgL [Escherichia coli MS 84-1]
gi|300841804|gb|EFK69564.1| outer membrane assembly lipoprotein YfgL [Escherichia coli MS
124-1]
gi|315256532|gb|EFU36500.1| outer membrane assembly lipoprotein YfgL [Escherichia coli MS 85-1]
Length = 392
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 95/226 (42%), Gaps = 24/226 (10%)
Query: 44 PAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG--------------LSGTGIVV 89
PA+A+ VVY G + A+NA +G IW +L++ G +SG + +
Sbjct: 65 PALADNVVYTADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVSGGHVYI 124
Query: 90 NVTVAVVVAVSRSNGELVWSTQIDPRPRSQITMS-GSVYMGAFYVGLSSLEEALPADQCC 148
A V A++ S+G + W T++ S+ +S G V + L +L EA A +
Sbjct: 125 GSEKAQVYALNTSDGTVAWQTKVAGEALSRPVVSDGLVLIHTSNGQLQALNEADGAVK-W 183
Query: 149 TFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYS------GAAVWGS--SPAIDVIRRQK 200
T + L +R + GG G S G +W S A +
Sbjct: 184 TVNLDMPSLSLRGESAPATAFGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDR 243
Query: 201 QNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIF 246
++ T P + + + Y ++ ALD+ SG+I W + LG + F
Sbjct: 244 LSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQIMWKRELGSVNDF 289
Score = 42.0 bits (97), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 63/157 (40%), Gaps = 34/157 (21%)
Query: 32 WSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLS----KLTGLSGTGI 87
W + + P V++G+V + NG L A+N +GA+ W NL L G S
Sbjct: 143 WQTKVAGEALSRPVVSDGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPAT 202
Query: 88 VVNVTVA-----VVVAVSRSNGELVW---------STQIDPRPRSQITMSGSVYMGAFYV 133
V V AV G+++W ST+ID S + + V G +
Sbjct: 203 AFGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEID--RLSDVDTTPVVVNGVVF- 259
Query: 134 GLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYM 170
+ G+L LD+R+G+I+W+ +
Sbjct: 260 -------------ALAYNGNLTALDLRSGQIMWKREL 283
>gi|15803035|ref|NP_289065.1| outer membrane protein assembly complex subunit YfgL [Escherichia
coli O157:H7 str. EDL933]
gi|15832628|ref|NP_311401.1| outer membrane protein assembly complex subunit YfgL [Escherichia
coli O157:H7 str. Sakai]
gi|168748429|ref|ZP_02773451.1| outer membrane assembly lipoprotein YfgL [Escherichia coli O157:H7
str. EC4113]
gi|168756284|ref|ZP_02781291.1| outer membrane assembly lipoprotein YfgL [Escherichia coli O157:H7
str. EC4401]
gi|168761122|ref|ZP_02786129.1| outer membrane assembly lipoprotein YfgL [Escherichia coli O157:H7
str. EC4501]
gi|168768604|ref|ZP_02793611.1| outer membrane assembly lipoprotein YfgL [Escherichia coli O157:H7
str. EC4486]
gi|168773574|ref|ZP_02798581.1| outer membrane assembly lipoprotein YfgL [Escherichia coli O157:H7
str. EC4196]
gi|168778478|ref|ZP_02803485.1| outer membrane assembly lipoprotein YfgL [Escherichia coli O157:H7
str. EC4076]
gi|168787858|ref|ZP_02812865.1| outer membrane assembly lipoprotein YfgL [Escherichia coli O157:H7
str. EC869]
gi|168798883|ref|ZP_02823890.1| outer membrane assembly lipoprotein YfgL [Escherichia coli O157:H7
str. EC508]
gi|195936654|ref|ZP_03082036.1| outer membrane protein assembly complex subunit YfgL [Escherichia
coli O157:H7 str. EC4024]
gi|208807176|ref|ZP_03249513.1| outer membrane assembly lipoprotein YfgL [Escherichia coli O157:H7
str. EC4206]
gi|208813941|ref|ZP_03255270.1| outer membrane assembly lipoprotein YfgL [Escherichia coli O157:H7
str. EC4045]
gi|208820918|ref|ZP_03261238.1| outer membrane assembly lipoprotein YfgL [Escherichia coli O157:H7
str. EC4042]
gi|209398578|ref|YP_002271982.1| outer membrane protein assembly complex subunit YfgL [Escherichia
coli O157:H7 str. EC4115]
gi|217327735|ref|ZP_03443818.1| outer membrane assembly lipoprotein YfgL [Escherichia coli O157:H7
str. TW14588]
gi|254794458|ref|YP_003079295.1| outer membrane protein assembly complex subunit YfgL [Escherichia
coli O157:H7 str. TW14359]
gi|261223056|ref|ZP_05937337.1| protein assembly complex, lipoprotein component [Escherichia coli
O157:H7 str. FRIK2000]
gi|261259393|ref|ZP_05951926.1| protein assembly complex, lipoprotein component [Escherichia coli
O157:H7 str. FRIK966]
gi|387883706|ref|YP_006314008.1| outer membrane protein assembly complex subunit YfgL [Escherichia
coli Xuzhou21]
gi|416309998|ref|ZP_11656197.1| outer membrane protein assembly complex subunit YfgL [Escherichia
coli O157:H7 str. 1044]
gi|416321665|ref|ZP_11663513.1| outer membrane protein assembly complex subunit YfgL [Escherichia
coli O157:H7 str. EC1212]
gi|416329939|ref|ZP_11669066.1| outer membrane protein assembly complex subunit YfgL [Escherichia
coli O157:H7 str. 1125]
gi|419046400|ref|ZP_13593337.1| outer membrane assembly lipoprotein YfgL [Escherichia coli DEC3A]
gi|419052223|ref|ZP_13599094.1| outer membrane assembly lipoprotein YfgL [Escherichia coli DEC3B]
gi|419058258|ref|ZP_13605063.1| outer membrane assembly lipoprotein YfgL [Escherichia coli DEC3C]
gi|419063725|ref|ZP_13610452.1| outer membrane assembly lipoprotein YfgL [Escherichia coli DEC3D]
gi|419070623|ref|ZP_13616244.1| outer membrane assembly lipoprotein YfgL [Escherichia coli DEC3E]
gi|419081704|ref|ZP_13627152.1| outer membrane assembly lipoprotein YfgL [Escherichia coli DEC4A]
gi|419087559|ref|ZP_13632915.1| outer membrane assembly lipoprotein YfgL [Escherichia coli DEC4B]
gi|419093194|ref|ZP_13638479.1| outer membrane assembly lipoprotein YfgL [Escherichia coli DEC4C]
gi|419099261|ref|ZP_13644458.1| outer membrane assembly lipoprotein YfgL [Escherichia coli DEC4D]
gi|419105076|ref|ZP_13650205.1| outer membrane assembly lipoprotein YfgL [Escherichia coli DEC4E]
gi|419110536|ref|ZP_13655592.1| outer membrane assembly lipoprotein YfgL [Escherichia coli DEC4F]
gi|420270778|ref|ZP_14773136.1| outer membrane assembly lipoprotein YfgL [Escherichia coli PA22]
gi|420276514|ref|ZP_14778798.1| outer membrane assembly lipoprotein YfgL [Escherichia coli PA40]
gi|420287850|ref|ZP_14790036.1| outer membrane assembly lipoprotein YfgL [Escherichia coli TW10246]
gi|420293542|ref|ZP_14795658.1| outer membrane assembly lipoprotein YfgL [Escherichia coli TW11039]
gi|420299384|ref|ZP_14801433.1| outer membrane assembly lipoprotein YfgL [Escherichia coli TW09109]
gi|420305357|ref|ZP_14807351.1| outer membrane assembly lipoprotein YfgL [Escherichia coli TW10119]
gi|420310851|ref|ZP_14812784.1| outer membrane assembly lipoprotein YfgL [Escherichia coli EC1738]
gi|420316368|ref|ZP_14818243.1| outer membrane assembly lipoprotein YfgL [Escherichia coli EC1734]
gi|421813499|ref|ZP_16249217.1| outer membrane assembly lipoprotein YfgL [Escherichia coli 8.0416]
gi|421819314|ref|ZP_16254810.1| outer membrane assembly lipoprotein YfgL [Escherichia coli 10.0821]
gi|421825308|ref|ZP_16260666.1| outer membrane assembly lipoprotein YfgL [Escherichia coli FRIK920]
gi|421832041|ref|ZP_16267328.1| outer membrane assembly lipoprotein YfgL [Escherichia coli PA7]
gi|423726223|ref|ZP_17700284.1| outer membrane assembly lipoprotein YfgL [Escherichia coli PA31]
gi|424078600|ref|ZP_17815591.1| outer membrane assembly lipoprotein YfgL [Escherichia coli FDA505]
gi|424085065|ref|ZP_17821568.1| outer membrane assembly lipoprotein YfgL [Escherichia coli FDA517]
gi|424091474|ref|ZP_17827419.1| outer membrane assembly lipoprotein YfgL [Escherichia coli
FRIK1996]
gi|424098096|ref|ZP_17833418.1| outer membrane assembly lipoprotein YfgL [Escherichia coli
FRIK1985]
gi|424104329|ref|ZP_17839110.1| outer membrane assembly lipoprotein YfgL [Escherichia coli
FRIK1990]
gi|424111001|ref|ZP_17845245.1| outer membrane assembly lipoprotein YfgL [Escherichia coli 93-001]
gi|424116940|ref|ZP_17850788.1| outer membrane assembly lipoprotein YfgL [Escherichia coli PA3]
gi|424123122|ref|ZP_17856453.1| outer membrane assembly lipoprotein YfgL [Escherichia coli PA5]
gi|424129286|ref|ZP_17862202.1| outer membrane assembly lipoprotein YfgL [Escherichia coli PA9]
gi|424135560|ref|ZP_17868032.1| outer membrane assembly lipoprotein YfgL [Escherichia coli PA10]
gi|424142125|ref|ZP_17874021.1| outer membrane assembly lipoprotein YfgL [Escherichia coli PA14]
gi|424148555|ref|ZP_17879939.1| outer membrane assembly lipoprotein YfgL [Escherichia coli PA15]
gi|424154372|ref|ZP_17885336.1| outer membrane assembly lipoprotein YfgL [Escherichia coli PA24]
gi|424250484|ref|ZP_17890899.1| outer membrane assembly lipoprotein YfgL [Escherichia coli PA25]
gi|424328679|ref|ZP_17896811.1| outer membrane assembly lipoprotein YfgL [Escherichia coli PA28]
gi|424450806|ref|ZP_17902521.1| outer membrane assembly lipoprotein YfgL [Escherichia coli PA32]
gi|424457006|ref|ZP_17908152.1| outer membrane assembly lipoprotein YfgL [Escherichia coli PA33]
gi|424463443|ref|ZP_17913891.1| outer membrane assembly lipoprotein YfgL [Escherichia coli PA39]
gi|424469783|ref|ZP_17919616.1| outer membrane assembly lipoprotein YfgL [Escherichia coli PA41]
gi|424476308|ref|ZP_17925633.1| outer membrane assembly lipoprotein YfgL [Escherichia coli PA42]
gi|424482061|ref|ZP_17931051.1| outer membrane assembly lipoprotein YfgL [Escherichia coli TW07945]
gi|424488221|ref|ZP_17936798.1| outer membrane assembly lipoprotein YfgL [Escherichia coli TW09098]
gi|424494785|ref|ZP_17942520.1| outer membrane assembly lipoprotein YfgL [Escherichia coli TW09195]
gi|424501591|ref|ZP_17948497.1| outer membrane assembly lipoprotein YfgL [Escherichia coli EC4203]
gi|424507838|ref|ZP_17954243.1| outer membrane assembly lipoprotein YfgL [Escherichia coli EC4196]
gi|424515159|ref|ZP_17959853.1| outer membrane assembly lipoprotein YfgL [Escherichia coli TW14313]
gi|424521379|ref|ZP_17965516.1| outer membrane assembly lipoprotein YfgL [Escherichia coli TW14301]
gi|424527272|ref|ZP_17970997.1| outer membrane assembly lipoprotein YfgL [Escherichia coli EC4421]
gi|424533420|ref|ZP_17976779.1| outer membrane assembly lipoprotein YfgL [Escherichia coli EC4422]
gi|424539520|ref|ZP_17982472.1| outer membrane assembly lipoprotein YfgL [Escherichia coli EC4013]
gi|424545571|ref|ZP_17987986.1| outer membrane assembly lipoprotein YfgL [Escherichia coli EC4402]
gi|424551811|ref|ZP_17993679.1| outer membrane assembly lipoprotein YfgL [Escherichia coli EC4439]
gi|424557997|ref|ZP_17999423.1| outer membrane assembly lipoprotein YfgL [Escherichia coli EC4436]
gi|424564343|ref|ZP_18005353.1| outer membrane assembly lipoprotein YfgL [Escherichia coli EC4437]
gi|424570476|ref|ZP_18011039.1| outer membrane assembly lipoprotein YfgL [Escherichia coli EC4448]
gi|424576623|ref|ZP_18016707.1| outer membrane assembly lipoprotein YfgL [Escherichia coli EC1845]
gi|424582462|ref|ZP_18022116.1| outer membrane assembly lipoprotein YfgL [Escherichia coli EC1863]
gi|425099169|ref|ZP_18501908.1| outer membrane assembly lipoprotein YfgL [Escherichia coli 3.4870]
gi|425105228|ref|ZP_18507554.1| outer membrane assembly lipoprotein YfgL [Escherichia coli 5.2239]
gi|425111243|ref|ZP_18513170.1| outer membrane assembly lipoprotein YfgL [Escherichia coli 6.0172]
gi|425127168|ref|ZP_18528345.1| outer membrane assembly lipoprotein YfgL [Escherichia coli 8.0586]
gi|425132901|ref|ZP_18533758.1| outer membrane assembly lipoprotein YfgL [Escherichia coli 8.2524]
gi|425139408|ref|ZP_18539797.1| outer membrane assembly lipoprotein YfgL [Escherichia coli 10.0833]
gi|425151311|ref|ZP_18550932.1| outer membrane assembly lipoprotein YfgL [Escherichia coli 88.0221]
gi|425157174|ref|ZP_18556447.1| outer membrane assembly lipoprotein YfgL [Escherichia coli PA34]
gi|425163533|ref|ZP_18562428.1| outer membrane assembly lipoprotein YfgL [Escherichia coli FDA506]
gi|425169273|ref|ZP_18567757.1| outer membrane assembly lipoprotein YfgL [Escherichia coli FDA507]
gi|425181365|ref|ZP_18579071.1| outer membrane assembly lipoprotein YfgL [Escherichia coli
FRIK1999]
gi|425187635|ref|ZP_18584918.1| outer membrane assembly lipoprotein YfgL [Escherichia coli
FRIK1997]
gi|425194407|ref|ZP_18591186.1| outer membrane assembly lipoprotein YfgL [Escherichia coli NE1487]
gi|425200883|ref|ZP_18597101.1| outer membrane assembly lipoprotein YfgL [Escherichia coli NE037]
gi|425207265|ref|ZP_18603074.1| outer membrane assembly lipoprotein YfgL [Escherichia coli
FRIK2001]
gi|425213024|ref|ZP_18608434.1| outer membrane assembly lipoprotein YfgL [Escherichia coli PA4]
gi|425219144|ref|ZP_18614121.1| outer membrane assembly lipoprotein YfgL [Escherichia coli PA23]
gi|425225694|ref|ZP_18620171.1| outer membrane assembly lipoprotein YfgL [Escherichia coli PA49]
gi|425231958|ref|ZP_18626007.1| outer membrane assembly lipoprotein YfgL [Escherichia coli PA45]
gi|425237877|ref|ZP_18631606.1| outer membrane assembly lipoprotein YfgL [Escherichia coli TT12B]
gi|425244092|ref|ZP_18637410.1| outer membrane assembly lipoprotein YfgL [Escherichia coli MA6]
gi|425256085|ref|ZP_18648613.1| outer membrane assembly lipoprotein YfgL [Escherichia coli CB7326]
gi|425295776|ref|ZP_18685987.1| outer membrane assembly lipoprotein YfgL [Escherichia coli PA38]
gi|425312482|ref|ZP_18701675.1| outer membrane assembly lipoprotein YfgL [Escherichia coli EC1735]
gi|425318476|ref|ZP_18707274.1| outer membrane assembly lipoprotein YfgL [Escherichia coli EC1736]
gi|425324544|ref|ZP_18712922.1| outer membrane assembly lipoprotein YfgL [Escherichia coli EC1737]
gi|425330909|ref|ZP_18718774.1| outer membrane assembly lipoprotein YfgL [Escherichia coli EC1846]
gi|425337085|ref|ZP_18724467.1| outer membrane assembly lipoprotein YfgL [Escherichia coli EC1847]
gi|425343427|ref|ZP_18730326.1| outer membrane assembly lipoprotein YfgL [Escherichia coli EC1848]
gi|425349236|ref|ZP_18735713.1| outer membrane assembly lipoprotein YfgL [Escherichia coli EC1849]
gi|425355530|ref|ZP_18741605.1| outer membrane assembly lipoprotein YfgL [Escherichia coli EC1850]
gi|425361493|ref|ZP_18747150.1| outer membrane assembly lipoprotein YfgL [Escherichia coli EC1856]
gi|425367675|ref|ZP_18752845.1| outer membrane assembly lipoprotein YfgL [Escherichia coli EC1862]
gi|425374025|ref|ZP_18758675.1| outer membrane assembly lipoprotein YfgL [Escherichia coli EC1864]
gi|425386914|ref|ZP_18770480.1| outer membrane assembly lipoprotein YfgL [Escherichia coli EC1866]
gi|425393601|ref|ZP_18776716.1| outer membrane assembly lipoprotein YfgL [Escherichia coli EC1868]
gi|425399700|ref|ZP_18782414.1| outer membrane assembly lipoprotein YfgL [Escherichia coli EC1869]
gi|425405789|ref|ZP_18788020.1| outer membrane assembly lipoprotein YfgL [Escherichia coli EC1870]
gi|425412179|ref|ZP_18793950.1| outer membrane assembly lipoprotein YfgL [Escherichia coli NE098]
gi|425418500|ref|ZP_18799779.1| outer membrane assembly lipoprotein YfgL [Escherichia coli FRIK523]
gi|425429761|ref|ZP_18810381.1| outer membrane assembly lipoprotein YfgL [Escherichia coli 0.1304]
gi|428948181|ref|ZP_19020475.1| outer membrane assembly lipoprotein YfgL [Escherichia coli 88.1467]
gi|428954277|ref|ZP_19026086.1| outer membrane assembly lipoprotein YfgL [Escherichia coli 88.1042]
gi|428960242|ref|ZP_19031560.1| outer membrane assembly lipoprotein YfgL [Escherichia coli 89.0511]
gi|428966866|ref|ZP_19037595.1| outer membrane assembly lipoprotein YfgL [Escherichia coli 90.0091]
gi|428972579|ref|ZP_19042930.1| outer membrane assembly lipoprotein YfgL [Escherichia coli 90.0039]
gi|428979091|ref|ZP_19048927.1| outer membrane assembly lipoprotein YfgL [Escherichia coli 90.2281]
gi|428984767|ref|ZP_19054173.1| outer membrane assembly lipoprotein YfgL [Escherichia coli 93.0055]
gi|428990990|ref|ZP_19059991.1| outer membrane assembly lipoprotein YfgL [Escherichia coli 93.0056]
gi|428996856|ref|ZP_19065465.1| outer membrane assembly lipoprotein YfgL [Escherichia coli 94.0618]
gi|429003102|ref|ZP_19071239.1| outer membrane assembly lipoprotein YfgL [Escherichia coli 95.0183]
gi|429009187|ref|ZP_19076714.1| outer membrane assembly lipoprotein YfgL [Escherichia coli 95.1288]
gi|429015716|ref|ZP_19082621.1| outer membrane assembly lipoprotein YfgL [Escherichia coli 95.0943]
gi|429021584|ref|ZP_19088119.1| outer membrane assembly lipoprotein YfgL [Escherichia coli 96.0428]
gi|429033837|ref|ZP_19099373.1| outer membrane assembly lipoprotein YfgL [Escherichia coli 96.0939]
gi|429039895|ref|ZP_19105016.1| outer membrane assembly lipoprotein YfgL [Escherichia coli 96.0932]
gi|429045779|ref|ZP_19110505.1| outer membrane assembly lipoprotein YfgL [Escherichia coli 96.0107]
gi|429051225|ref|ZP_19115796.1| outer membrane assembly lipoprotein YfgL [Escherichia coli 97.0003]
gi|429056599|ref|ZP_19120925.1| outer membrane assembly lipoprotein YfgL [Escherichia coli 97.1742]
gi|429062096|ref|ZP_19126123.1| outer membrane assembly lipoprotein YfgL [Escherichia coli 97.0007]
gi|429068371|ref|ZP_19131849.1| outer membrane assembly lipoprotein YfgL [Escherichia coli 99.0672]
gi|429074319|ref|ZP_19137575.1| outer membrane assembly lipoprotein YfgL [Escherichia coli 99.0678]
gi|429079513|ref|ZP_19142653.1| outer membrane assembly lipoprotein YfgL [Escherichia coli 99.0713]
gi|429827529|ref|ZP_19358583.1| outer membrane assembly lipoprotein YfgL [Escherichia coli 96.0109]
gi|429833890|ref|ZP_19364252.1| outer membrane assembly lipoprotein YfgL [Escherichia coli 97.0010]
gi|444926064|ref|ZP_21245367.1| outer membrane assembly lipoprotein YfgL [Escherichia coli
09BKT078844]
gi|444931774|ref|ZP_21250819.1| outer membrane assembly lipoprotein YfgL [Escherichia coli 99.0814]
gi|444937224|ref|ZP_21256005.1| outer membrane assembly lipoprotein YfgL [Escherichia coli 99.0815]
gi|444942855|ref|ZP_21261377.1| outer membrane assembly lipoprotein YfgL [Escherichia coli 99.0816]
gi|444948338|ref|ZP_21266653.1| outer membrane assembly lipoprotein YfgL [Escherichia coli 99.0839]
gi|444953883|ref|ZP_21271983.1| outer membrane assembly lipoprotein YfgL [Escherichia coli 99.0848]
gi|444959408|ref|ZP_21277265.1| outer membrane assembly lipoprotein YfgL [Escherichia coli 99.1753]
gi|444966204|ref|ZP_21283746.1| outer membrane assembly lipoprotein YfgL [Escherichia coli 99.1775]
gi|444970539|ref|ZP_21287906.1| outer membrane assembly lipoprotein YfgL [Escherichia coli 99.1793]
gi|444975827|ref|ZP_21292955.1| outer membrane assembly lipoprotein YfgL [Escherichia coli 99.1805]
gi|444981210|ref|ZP_21298126.1| outer membrane assembly lipoprotein YfgL [Escherichia coli ATCC
700728]
gi|444986605|ref|ZP_21303390.1| outer membrane assembly lipoprotein YfgL [Escherichia coli PA11]
gi|444991920|ref|ZP_21308567.1| outer membrane assembly lipoprotein YfgL [Escherichia coli PA19]
gi|444997226|ref|ZP_21313728.1| outer membrane assembly lipoprotein YfgL [Escherichia coli PA13]
gi|445002803|ref|ZP_21319196.1| outer membrane assembly lipoprotein YfgL [Escherichia coli PA2]
gi|445008241|ref|ZP_21324484.1| outer membrane assembly lipoprotein YfgL [Escherichia coli PA47]
gi|445019201|ref|ZP_21335170.1| outer membrane assembly lipoprotein YfgL [Escherichia coli PA8]
gi|445024657|ref|ZP_21340485.1| outer membrane assembly lipoprotein YfgL [Escherichia coli 7.1982]
gi|445029992|ref|ZP_21345671.1| outer membrane assembly lipoprotein YfgL [Escherichia coli 99.1781]
gi|445035460|ref|ZP_21350996.1| outer membrane assembly lipoprotein YfgL [Escherichia coli 99.1762]
gi|445041084|ref|ZP_21356461.1| outer membrane assembly lipoprotein YfgL [Escherichia coli PA35]
gi|445046307|ref|ZP_21361562.1| outer membrane assembly lipoprotein YfgL [Escherichia coli 3.4880]
gi|445051826|ref|ZP_21366877.1| outer membrane assembly lipoprotein YfgL [Escherichia coli 95.0083]
gi|445057598|ref|ZP_21372460.1| outer membrane assembly lipoprotein YfgL [Escherichia coli 99.0670]
gi|12516903|gb|AAG57622.1|AE005480_9 putative dehydrogenase [Escherichia coli O157:H7 str. EDL933]
gi|13362844|dbj|BAB36797.1| putative dehydrogenase [Escherichia coli O157:H7 str. Sakai]
gi|187770643|gb|EDU34487.1| outer membrane assembly lipoprotein YfgL [Escherichia coli O157:H7
str. EC4196]
gi|188017133|gb|EDU55255.1| outer membrane assembly lipoprotein YfgL [Escherichia coli O157:H7
str. EC4113]
gi|189003558|gb|EDU72544.1| outer membrane assembly lipoprotein YfgL [Escherichia coli O157:H7
str. EC4076]
gi|189356580|gb|EDU74999.1| outer membrane assembly lipoprotein YfgL [Escherichia coli O157:H7
str. EC4401]
gi|189362265|gb|EDU80684.1| outer membrane assembly lipoprotein YfgL [Escherichia coli O157:H7
str. EC4486]
gi|189368416|gb|EDU86832.1| outer membrane assembly lipoprotein YfgL [Escherichia coli O157:H7
str. EC4501]
gi|189372258|gb|EDU90674.1| outer membrane assembly lipoprotein YfgL [Escherichia coli O157:H7
str. EC869]
gi|189378665|gb|EDU97081.1| outer membrane assembly lipoprotein YfgL [Escherichia coli O157:H7
str. EC508]
gi|208726977|gb|EDZ76578.1| outer membrane assembly lipoprotein YfgL [Escherichia coli O157:H7
str. EC4206]
gi|208735218|gb|EDZ83905.1| outer membrane assembly lipoprotein YfgL [Escherichia coli O157:H7
str. EC4045]
gi|208741041|gb|EDZ88723.1| outer membrane assembly lipoprotein YfgL [Escherichia coli O157:H7
str. EC4042]
gi|209159978|gb|ACI37411.1| outer membrane assembly lipoprotein YfgL [Escherichia coli O157:H7
str. EC4115]
gi|209763410|gb|ACI80017.1| putative dehydrogenase [Escherichia coli]
gi|209763412|gb|ACI80018.1| putative dehydrogenase [Escherichia coli]
gi|209763416|gb|ACI80020.1| putative dehydrogenase [Escherichia coli]
gi|217320102|gb|EEC28527.1| outer membrane assembly lipoprotein YfgL [Escherichia coli O157:H7
str. TW14588]
gi|254593858|gb|ACT73219.1| protein assembly complex, lipoprotein component [Escherichia coli
O157:H7 str. TW14359]
gi|320188845|gb|EFW63504.1| outer membrane protein assembly complex subunit YfgL [Escherichia
coli O157:H7 str. EC1212]
gi|326340310|gb|EGD64114.1| outer membrane protein assembly complex subunit YfgL [Escherichia
coli O157:H7 str. 1125]
gi|326344994|gb|EGD68738.1| outer membrane protein assembly complex subunit YfgL [Escherichia
coli O157:H7 str. 1044]
gi|377892852|gb|EHU57292.1| outer membrane assembly lipoprotein YfgL [Escherichia coli DEC3B]
gi|377893230|gb|EHU57669.1| outer membrane assembly lipoprotein YfgL [Escherichia coli DEC3A]
gi|377904845|gb|EHU69123.1| outer membrane assembly lipoprotein YfgL [Escherichia coli DEC3C]
gi|377909365|gb|EHU73567.1| outer membrane assembly lipoprotein YfgL [Escherichia coli DEC3D]
gi|377911597|gb|EHU75766.1| outer membrane assembly lipoprotein YfgL [Escherichia coli DEC3E]
gi|377926334|gb|EHU90269.1| outer membrane assembly lipoprotein YfgL [Escherichia coli DEC4A]
gi|377929814|gb|EHU93702.1| outer membrane assembly lipoprotein YfgL [Escherichia coli DEC4B]
gi|377941377|gb|EHV05117.1| outer membrane assembly lipoprotein YfgL [Escherichia coli DEC4D]
gi|377941636|gb|EHV05373.1| outer membrane assembly lipoprotein YfgL [Escherichia coli DEC4C]
gi|377947559|gb|EHV11226.1| outer membrane assembly lipoprotein YfgL [Escherichia coli DEC4E]
gi|377956792|gb|EHV20335.1| outer membrane assembly lipoprotein YfgL [Escherichia coli DEC4F]
gi|386797164|gb|AFJ30198.1| outer membrane protein assembly complex subunit YfgL [Escherichia
coli Xuzhou21]
gi|390641158|gb|EIN20590.1| outer membrane assembly lipoprotein YfgL [Escherichia coli
FRIK1996]
gi|390642791|gb|EIN22180.1| outer membrane assembly lipoprotein YfgL [Escherichia coli FDA517]
gi|390643579|gb|EIN22918.1| outer membrane assembly lipoprotein YfgL [Escherichia coli FDA505]
gi|390659989|gb|EIN37726.1| outer membrane assembly lipoprotein YfgL [Escherichia coli 93-001]
gi|390661305|gb|EIN38964.1| outer membrane assembly lipoprotein YfgL [Escherichia coli
FRIK1985]
gi|390663145|gb|EIN40670.1| outer membrane assembly lipoprotein YfgL [Escherichia coli
FRIK1990]
gi|390676906|gb|EIN52984.1| outer membrane assembly lipoprotein YfgL [Escherichia coli PA3]
gi|390680257|gb|EIN56112.1| outer membrane assembly lipoprotein YfgL [Escherichia coli PA5]
gi|390683365|gb|EIN59061.1| outer membrane assembly lipoprotein YfgL [Escherichia coli PA9]
gi|390695821|gb|EIN70332.1| outer membrane assembly lipoprotein YfgL [Escherichia coli PA10]
gi|390700183|gb|EIN74494.1| outer membrane assembly lipoprotein YfgL [Escherichia coli PA15]
gi|390700768|gb|EIN75049.1| outer membrane assembly lipoprotein YfgL [Escherichia coli PA14]
gi|390714290|gb|EIN87204.1| outer membrane assembly lipoprotein YfgL [Escherichia coli PA22]
gi|390722135|gb|EIN94824.1| outer membrane assembly lipoprotein YfgL [Escherichia coli PA25]
gi|390723558|gb|EIN96146.1| outer membrane assembly lipoprotein YfgL [Escherichia coli PA24]
gi|390726569|gb|EIN99007.1| outer membrane assembly lipoprotein YfgL [Escherichia coli PA28]
gi|390741703|gb|EIO12757.1| outer membrane assembly lipoprotein YfgL [Escherichia coli PA31]
gi|390742190|gb|EIO13206.1| outer membrane assembly lipoprotein YfgL [Escherichia coli PA32]
gi|390744868|gb|EIO15709.1| outer membrane assembly lipoprotein YfgL [Escherichia coli PA33]
gi|390757924|gb|EIO27394.1| outer membrane assembly lipoprotein YfgL [Escherichia coli PA40]
gi|390766953|gb|EIO36062.1| outer membrane assembly lipoprotein YfgL [Escherichia coli PA41]
gi|390768100|gb|EIO37148.1| outer membrane assembly lipoprotein YfgL [Escherichia coli PA39]
gi|390768566|gb|EIO37597.1| outer membrane assembly lipoprotein YfgL [Escherichia coli PA42]
gi|390789589|gb|EIO57038.1| outer membrane assembly lipoprotein YfgL [Escherichia coli TW10246]
gi|390789914|gb|EIO57343.1| outer membrane assembly lipoprotein YfgL [Escherichia coli TW07945]
gi|390795865|gb|EIO63142.1| outer membrane assembly lipoprotein YfgL [Escherichia coli TW11039]
gi|390805344|gb|EIO72291.1| outer membrane assembly lipoprotein YfgL [Escherichia coli TW09098]
gi|390807079|gb|EIO73981.1| outer membrane assembly lipoprotein YfgL [Escherichia coli TW09109]
gi|390815662|gb|EIO82190.1| outer membrane assembly lipoprotein YfgL [Escherichia coli TW10119]
gi|390825526|gb|EIO91445.1| outer membrane assembly lipoprotein YfgL [Escherichia coli EC4203]
gi|390830038|gb|EIO95615.1| outer membrane assembly lipoprotein YfgL [Escherichia coli TW09195]
gi|390830300|gb|EIO95847.1| outer membrane assembly lipoprotein YfgL [Escherichia coli EC4196]
gi|390845609|gb|EIP09237.1| outer membrane assembly lipoprotein YfgL [Escherichia coli TW14301]
gi|390845921|gb|EIP09541.1| outer membrane assembly lipoprotein YfgL [Escherichia coli TW14313]
gi|390850251|gb|EIP13639.1| outer membrane assembly lipoprotein YfgL [Escherichia coli EC4421]
gi|390860942|gb|EIP23224.1| outer membrane assembly lipoprotein YfgL [Escherichia coli EC4422]
gi|390864872|gb|EIP26941.1| outer membrane assembly lipoprotein YfgL [Escherichia coli EC4013]
gi|390870150|gb|EIP31709.1| outer membrane assembly lipoprotein YfgL [Escherichia coli EC4402]
gi|390878176|gb|EIP39051.1| outer membrane assembly lipoprotein YfgL [Escherichia coli EC4439]
gi|390883329|gb|EIP43771.1| outer membrane assembly lipoprotein YfgL [Escherichia coli EC4436]
gi|390892976|gb|EIP52546.1| outer membrane assembly lipoprotein YfgL [Escherichia coli EC4437]
gi|390895488|gb|EIP54953.1| outer membrane assembly lipoprotein YfgL [Escherichia coli EC4448]
gi|390900130|gb|EIP59366.1| outer membrane assembly lipoprotein YfgL [Escherichia coli EC1738]
gi|390907732|gb|EIP66585.1| outer membrane assembly lipoprotein YfgL [Escherichia coli EC1734]
gi|390918706|gb|EIP77095.1| outer membrane assembly lipoprotein YfgL [Escherichia coli EC1863]
gi|390919978|gb|EIP78298.1| outer membrane assembly lipoprotein YfgL [Escherichia coli EC1845]
gi|408064413|gb|EKG98895.1| outer membrane assembly lipoprotein YfgL [Escherichia coli PA7]
gi|408066322|gb|EKH00781.1| outer membrane assembly lipoprotein YfgL [Escherichia coli FRIK920]
gi|408069879|gb|EKH04261.1| outer membrane assembly lipoprotein YfgL [Escherichia coli PA34]
gi|408079121|gb|EKH13249.1| outer membrane assembly lipoprotein YfgL [Escherichia coli FDA506]
gi|408082587|gb|EKH16553.1| outer membrane assembly lipoprotein YfgL [Escherichia coli FDA507]
gi|408097390|gb|EKH30289.1| outer membrane assembly lipoprotein YfgL [Escherichia coli
FRIK1999]
gi|408103689|gb|EKH36019.1| outer membrane assembly lipoprotein YfgL [Escherichia coli
FRIK1997]
gi|408108267|gb|EKH40284.1| outer membrane assembly lipoprotein YfgL [Escherichia coli NE1487]
gi|408114664|gb|EKH46190.1| outer membrane assembly lipoprotein YfgL [Escherichia coli NE037]
gi|408120607|gb|EKH51583.1| outer membrane assembly lipoprotein YfgL [Escherichia coli
FRIK2001]
gi|408127106|gb|EKH57610.1| outer membrane assembly lipoprotein YfgL [Escherichia coli PA4]
gi|408137507|gb|EKH67208.1| outer membrane assembly lipoprotein YfgL [Escherichia coli PA23]
gi|408139568|gb|EKH69165.1| outer membrane assembly lipoprotein YfgL [Escherichia coli PA49]
gi|408145795|gb|EKH74945.1| outer membrane assembly lipoprotein YfgL [Escherichia coli PA45]
gi|408154828|gb|EKH83158.1| outer membrane assembly lipoprotein YfgL [Escherichia coli TT12B]
gi|408159590|gb|EKH87643.1| outer membrane assembly lipoprotein YfgL [Escherichia coli MA6]
gi|408173193|gb|EKI00239.1| outer membrane assembly lipoprotein YfgL [Escherichia coli CB7326]
gi|408217243|gb|EKI41519.1| outer membrane assembly lipoprotein YfgL [Escherichia coli PA38]
gi|408226758|gb|EKI50382.1| outer membrane assembly lipoprotein YfgL [Escherichia coli EC1735]
gi|408237949|gb|EKI60784.1| outer membrane assembly lipoprotein YfgL [Escherichia coli EC1736]
gi|408241898|gb|EKI64503.1| outer membrane assembly lipoprotein YfgL [Escherichia coli EC1737]
gi|408246280|gb|EKI68578.1| outer membrane assembly lipoprotein YfgL [Escherichia coli EC1846]
gi|408255114|gb|EKI76577.1| outer membrane assembly lipoprotein YfgL [Escherichia coli EC1847]
gi|408258545|gb|EKI79805.1| outer membrane assembly lipoprotein YfgL [Escherichia coli EC1848]
gi|408265064|gb|EKI85819.1| outer membrane assembly lipoprotein YfgL [Escherichia coli EC1849]
gi|408273921|gb|EKI93961.1| outer membrane assembly lipoprotein YfgL [Escherichia coli EC1850]
gi|408276715|gb|EKI96599.1| outer membrane assembly lipoprotein YfgL [Escherichia coli EC1856]
gi|408285842|gb|EKJ04825.1| outer membrane assembly lipoprotein YfgL [Escherichia coli EC1862]
gi|408290649|gb|EKJ09353.1| outer membrane assembly lipoprotein YfgL [Escherichia coli EC1864]
gi|408307429|gb|EKJ24770.1| outer membrane assembly lipoprotein YfgL [Escherichia coli EC1868]
gi|408307657|gb|EKJ24986.1| outer membrane assembly lipoprotein YfgL [Escherichia coli EC1866]
gi|408318657|gb|EKJ34860.1| outer membrane assembly lipoprotein YfgL [Escherichia coli EC1869]
gi|408324642|gb|EKJ40568.1| outer membrane assembly lipoprotein YfgL [Escherichia coli EC1870]
gi|408325805|gb|EKJ41650.1| outer membrane assembly lipoprotein YfgL [Escherichia coli NE098]
gi|408336172|gb|EKJ50971.1| outer membrane assembly lipoprotein YfgL [Escherichia coli FRIK523]
gi|408345972|gb|EKJ60283.1| outer membrane assembly lipoprotein YfgL [Escherichia coli 0.1304]
gi|408549141|gb|EKK26503.1| outer membrane assembly lipoprotein YfgL [Escherichia coli 3.4870]
gi|408549242|gb|EKK26603.1| outer membrane assembly lipoprotein YfgL [Escherichia coli 5.2239]
gi|408550421|gb|EKK27750.1| outer membrane assembly lipoprotein YfgL [Escherichia coli 6.0172]
gi|408568605|gb|EKK44634.1| outer membrane assembly lipoprotein YfgL [Escherichia coli 8.0586]
gi|408578462|gb|EKK53980.1| outer membrane assembly lipoprotein YfgL [Escherichia coli 10.0833]
gi|408580907|gb|EKK56280.1| outer membrane assembly lipoprotein YfgL [Escherichia coli 8.2524]
gi|408596060|gb|EKK70252.1| outer membrane assembly lipoprotein YfgL [Escherichia coli 88.0221]
gi|408600694|gb|EKK74527.1| outer membrane assembly lipoprotein YfgL [Escherichia coli 8.0416]
gi|408612235|gb|EKK85580.1| outer membrane assembly lipoprotein YfgL [Escherichia coli 10.0821]
gi|427204356|gb|EKV74633.1| outer membrane assembly lipoprotein YfgL [Escherichia coli 88.1042]
gi|427206409|gb|EKV76622.1| outer membrane assembly lipoprotein YfgL [Escherichia coli 89.0511]
gi|427208153|gb|EKV78290.1| outer membrane assembly lipoprotein YfgL [Escherichia coli 88.1467]
gi|427220496|gb|EKV89416.1| outer membrane assembly lipoprotein YfgL [Escherichia coli 90.0091]
gi|427223948|gb|EKV92673.1| outer membrane assembly lipoprotein YfgL [Escherichia coli 90.2281]
gi|427227724|gb|EKV96255.1| outer membrane assembly lipoprotein YfgL [Escherichia coli 90.0039]
gi|427241481|gb|EKW08912.1| outer membrane assembly lipoprotein YfgL [Escherichia coli 93.0056]
gi|427241872|gb|EKW09291.1| outer membrane assembly lipoprotein YfgL [Escherichia coli 93.0055]
gi|427245640|gb|EKW12921.1| outer membrane assembly lipoprotein YfgL [Escherichia coli 94.0618]
gi|427260555|gb|EKW26538.1| outer membrane assembly lipoprotein YfgL [Escherichia coli 95.0183]
gi|427261060|gb|EKW27010.1| outer membrane assembly lipoprotein YfgL [Escherichia coli 95.0943]
gi|427264272|gb|EKW29962.1| outer membrane assembly lipoprotein YfgL [Escherichia coli 95.1288]
gi|427276165|gb|EKW40744.1| outer membrane assembly lipoprotein YfgL [Escherichia coli 96.0428]
gi|427282987|gb|EKW47225.1| outer membrane assembly lipoprotein YfgL [Escherichia coli 96.0939]
gi|427291467|gb|EKW54869.1| outer membrane assembly lipoprotein YfgL [Escherichia coli 96.0932]
gi|427298994|gb|EKW61984.1| outer membrane assembly lipoprotein YfgL [Escherichia coli 96.0107]
gi|427300125|gb|EKW63077.1| outer membrane assembly lipoprotein YfgL [Escherichia coli 97.0003]
gi|427311960|gb|EKW74130.1| outer membrane assembly lipoprotein YfgL [Escherichia coli 97.1742]
gi|427315038|gb|EKW77053.1| outer membrane assembly lipoprotein YfgL [Escherichia coli 97.0007]
gi|427319317|gb|EKW81139.1| outer membrane assembly lipoprotein YfgL [Escherichia coli 99.0672]
gi|427327385|gb|EKW88774.1| outer membrane assembly lipoprotein YfgL [Escherichia coli 99.0678]
gi|427328845|gb|EKW90196.1| outer membrane assembly lipoprotein YfgL [Escherichia coli 99.0713]
gi|429253329|gb|EKY37819.1| outer membrane assembly lipoprotein YfgL [Escherichia coli 96.0109]
gi|429254900|gb|EKY39257.1| outer membrane assembly lipoprotein YfgL [Escherichia coli 97.0010]
gi|444537774|gb|ELV17683.1| outer membrane assembly lipoprotein YfgL [Escherichia coli 99.0814]
gi|444539335|gb|ELV19101.1| outer membrane assembly lipoprotein YfgL [Escherichia coli
09BKT078844]
gi|444547144|gb|ELV25772.1| outer membrane assembly lipoprotein YfgL [Escherichia coli 99.0815]
gi|444557039|gb|ELV34404.1| outer membrane assembly lipoprotein YfgL [Escherichia coli 99.0839]
gi|444557759|gb|ELV35084.1| outer membrane assembly lipoprotein YfgL [Escherichia coli 99.0816]
gi|444563074|gb|ELV40109.1| outer membrane assembly lipoprotein YfgL [Escherichia coli 99.0848]
gi|444571575|gb|ELV48051.1| outer membrane assembly lipoprotein YfgL [Escherichia coli 99.1775]
gi|444572586|gb|ELV49008.1| outer membrane assembly lipoprotein YfgL [Escherichia coli 99.1753]
gi|444578972|gb|ELV54993.1| outer membrane assembly lipoprotein YfgL [Escherichia coli 99.1793]
gi|444592922|gb|ELV68160.1| outer membrane assembly lipoprotein YfgL [Escherichia coli PA11]
gi|444593193|gb|ELV68424.1| outer membrane assembly lipoprotein YfgL [Escherichia coli ATCC
700728]
gi|444594765|gb|ELV69920.1| outer membrane assembly lipoprotein YfgL [Escherichia coli 99.1805]
gi|444606365|gb|ELV80984.1| outer membrane assembly lipoprotein YfgL [Escherichia coli PA13]
gi|444606770|gb|ELV81376.1| outer membrane assembly lipoprotein YfgL [Escherichia coli PA19]
gi|444615309|gb|ELV89515.1| outer membrane assembly lipoprotein YfgL [Escherichia coli PA2]
gi|444622831|gb|ELV96775.1| outer membrane assembly lipoprotein YfgL [Escherichia coli PA47]
gi|444629349|gb|ELW03053.1| outer membrane assembly lipoprotein YfgL [Escherichia coli PA8]
gi|444638190|gb|ELW11541.1| outer membrane assembly lipoprotein YfgL [Escherichia coli 7.1982]
gi|444640515|gb|ELW13774.1| outer membrane assembly lipoprotein YfgL [Escherichia coli 99.1781]
gi|444644875|gb|ELW17970.1| outer membrane assembly lipoprotein YfgL [Escherichia coli 99.1762]
gi|444653963|gb|ELW26658.1| outer membrane assembly lipoprotein YfgL [Escherichia coli PA35]
gi|444659366|gb|ELW31784.1| outer membrane assembly lipoprotein YfgL [Escherichia coli 3.4880]
gi|444663951|gb|ELW36155.1| outer membrane assembly lipoprotein YfgL [Escherichia coli 95.0083]
gi|444669402|gb|ELW41385.1| outer membrane assembly lipoprotein YfgL [Escherichia coli 99.0670]
Length = 392
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 94/226 (41%), Gaps = 24/226 (10%)
Query: 44 PAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG--------------LSGTGIVV 89
PA+A+ VVY G + A+NA +G IW +L++ G +SG + +
Sbjct: 65 PALADNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVSGGHVYI 124
Query: 90 NVTVAVVVAVSRSNGELVWSTQIDPRPRSQ-ITMSGSVYMGAFYVGLSSLEEALPADQCC 148
A V A++ S+G + W T++ S+ + G V + L +L EA A +
Sbjct: 125 GSEKAQVYALNTSDGTVAWQTKVAGEALSRPVVSDGLVLIHTSNGQLQALNEADGAVK-W 183
Query: 149 TFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYS------GAAVWGS--SPAIDVIRRQK 200
T + L +R + GG G S G +W S A +
Sbjct: 184 TVNLDMPSLSLRGESAPATAFGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDR 243
Query: 201 QNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIF 246
++ T P + + + Y ++ ALD+ SG+I W + LG + F
Sbjct: 244 LSDVDTTPAVVNGVVFALAYNGNLTALDLRSGQIMWKRELGSVNDF 289
Score = 43.1 bits (100), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 64/157 (40%), Gaps = 34/157 (21%)
Query: 32 WSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLS----KLTGLSGTGI 87
W + + P V++G+V + NG L A+N +GA+ W NL L G S
Sbjct: 143 WQTKVAGEALSRPVVSDGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPAT 202
Query: 88 VVNVTVA-----VVVAVSRSNGELVW---------STQIDPRPRSQITMSGSVYMGAFYV 133
V V AV G+++W ST+ID S + + +V G +
Sbjct: 203 AFGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEID--RLSDVDTTPAVVNGVVF- 259
Query: 134 GLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYM 170
+ G+L LD+R+G+I+W+ +
Sbjct: 260 -------------ALAYNGNLTALDLRSGQIMWKREL 283
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 62/131 (47%), Gaps = 19/131 (14%)
Query: 39 DISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG--LSGTGIVVNVTVAVV 96
D+ TPAV NGVV+ ++NG L A++ +G ++W++ L + + G I + V
Sbjct: 246 DVDTTPAVVNGVVFALAYNGNLTALDLRSGQIMWKRELGSVNDFIVDGNRIYLVDQNDRV 305
Query: 97 VAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAK 156
+A++ G +W TQ D R + S +Y G VG S G L
Sbjct: 306 MALTIDGGVTLW-TQSDLLHR--LLTSPVLYNGNLVVGDS--------------EGYLHW 348
Query: 157 LDVRNGRIIWQ 167
++V +GR + Q
Sbjct: 349 INVEDGRFVAQ 359
>gi|425306242|ref|ZP_18695944.1| outer membrane assembly lipoprotein YfgL [Escherichia coli N1]
gi|408227874|gb|EKI51443.1| outer membrane assembly lipoprotein YfgL [Escherichia coli N1]
Length = 392
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 94/226 (41%), Gaps = 24/226 (10%)
Query: 44 PAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG--------------LSGTGIVV 89
PA+A+ VVY G + A+NA +G IW +L++ G +SG + +
Sbjct: 65 PALADNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVSGGHVYI 124
Query: 90 NVTVAVVVAVSRSNGELVWSTQIDPRPRSQ-ITMSGSVYMGAFYVGLSSLEEALPADQCC 148
A V A++ S+G + W T++ S+ + G V + L +L EA A +
Sbjct: 125 GSEKAQVYALNTSDGTVAWQTKVAGEALSRPVVSDGLVLIHTSNGQLQALNEADGAVK-W 183
Query: 149 TFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYS------GAAVWGS--SPAIDVIRRQK 200
T + L +R + GG G S G +W S A +
Sbjct: 184 TVNLDMPSLSLRGESAPATAFGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDR 243
Query: 201 QNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIF 246
++ T P + + + Y ++ ALD+ SG+I W + LG + F
Sbjct: 244 LSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQIMWKRELGSVNDF 289
Score = 42.0 bits (97), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 63/157 (40%), Gaps = 34/157 (21%)
Query: 32 WSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLS----KLTGLSGTGI 87
W + + P V++G+V + NG L A+N +GA+ W NL L G S
Sbjct: 143 WQTKVAGEALSRPVVSDGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPAT 202
Query: 88 VVNVTVA-----VVVAVSRSNGELVW---------STQIDPRPRSQITMSGSVYMGAFYV 133
V V AV G+++W ST+ID S + + V G +
Sbjct: 203 AFGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEID--RLSDVDTTPVVVNGVVF- 259
Query: 134 GLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYM 170
+ G+L LD+R+G+I+W+ +
Sbjct: 260 -------------ALAYNGNLTALDLRSGQIMWKREL 283
Score = 38.9 bits (89), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 61/131 (46%), Gaps = 19/131 (14%)
Query: 39 DISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG--LSGTGIVVNVTVAVV 96
D+ TP V NGVV+ ++NG L A++ +G ++W++ L + + G I + V
Sbjct: 246 DVDTTPVVVNGVVFALAYNGNLTALDLRSGQIMWKRELGSVNDFIVDGNRIYLVDQNDRV 305
Query: 97 VAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAK 156
+A++ G +W TQ D R + S +Y G VG S G L
Sbjct: 306 MALTIDGGVTLW-TQSDLLHR--LLTSPVLYNGNLVVGDS--------------EGYLHW 348
Query: 157 LDVRNGRIIWQ 167
++V +GR + Q
Sbjct: 349 INVEDGRFVAQ 359
>gi|16130437|ref|NP_417007.1| lipoprotein required for OM biogenesis, in BamABCDE complex
[Escherichia coli str. K-12 substr. MG1655]
gi|170082122|ref|YP_001731442.1| outer membrane protein assembly complex subunit YfgL [Escherichia
coli str. K-12 substr. DH10B]
gi|238901677|ref|YP_002927473.1| outer membrane protein assembly complex subunit YfgL [Escherichia
coli BW2952]
gi|386594719|ref|YP_006091119.1| outer membrane assembly lipoprotein YfgL [Escherichia coli DH1]
gi|387622212|ref|YP_006129840.1| outer membrane protein assembly complex subunit [Escherichia coli
DH1]
gi|388478548|ref|YP_490740.1| protein assembly complex, lipoprotein component [Escherichia coli
str. K-12 substr. W3110]
gi|417943684|ref|ZP_12586931.1| outer membrane biogenesis protein BamB [Escherichia coli XH140A]
gi|417975809|ref|ZP_12616606.1| outer membrane biogenesis protein BamB [Escherichia coli XH001]
gi|418941809|ref|ZP_13495121.1| outer membrane biogenesis protein BamB [Escherichia coli O157:H43
str. T22]
gi|418957116|ref|ZP_13509040.1| protein assembly complex, lipoprotein component [Escherichia coli
J53]
gi|450246565|ref|ZP_21901002.1| outer membrane biogenesis protein BamB [Escherichia coli S17]
gi|3183438|sp|P77774.1|BAMB_ECOLI RecName: Full=Outer membrane protein assembly factor BamB; Flags:
Precursor
gi|1788859|gb|AAC75565.1| lipoprotein required for OM biogenesis, in BamABCDE complex
[Escherichia coli str. K-12 substr. MG1655]
gi|1805571|dbj|BAA16398.1| protein assembly complex, lipoprotein component [Escherichia coli
str. K12 substr. W3110]
gi|169889957|gb|ACB03664.1| protein assembly complex, lipoprotein component [Escherichia coli
str. K-12 substr. DH10B]
gi|238863292|gb|ACR65290.1| protein assembly complex, lipoprotein component [Escherichia coli
BW2952]
gi|260448408|gb|ACX38830.1| outer membrane assembly lipoprotein YfgL [Escherichia coli DH1]
gi|315137136|dbj|BAJ44295.1| outer membrane protein assembly complex subunit [Escherichia coli
DH1]
gi|342364546|gb|EGU28646.1| outer membrane biogenesis protein BamB [Escherichia coli XH140A]
gi|344194578|gb|EGV48651.1| outer membrane biogenesis protein BamB [Escherichia coli XH001]
gi|359332821|dbj|BAL39268.1| protein assembly complex, lipoprotein component [Escherichia coli
str. K-12 substr. MDS42]
gi|375322866|gb|EHS68599.1| outer membrane biogenesis protein BamB [Escherichia coli O157:H43
str. T22]
gi|384379763|gb|EIE37630.1| protein assembly complex, lipoprotein component [Escherichia coli
J53]
gi|449319212|gb|EMD09267.1| outer membrane biogenesis protein BamB [Escherichia coli S17]
Length = 392
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 94/226 (41%), Gaps = 24/226 (10%)
Query: 44 PAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG--------------LSGTGIVV 89
PA+A+ VVY G + A+NA +G IW +L++ G +SG + +
Sbjct: 65 PALADNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVSGGHVYI 124
Query: 90 NVTVAVVVAVSRSNGELVWSTQIDPRPRSQ-ITMSGSVYMGAFYVGLSSLEEALPADQCC 148
A V A++ S+G + W T++ S+ + G V + L +L EA A +
Sbjct: 125 GSEKAQVYALNTSDGTVAWQTKVAGEALSRPVVSDGLVLIHTSNGQLQALNEADGAVK-W 183
Query: 149 TFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYS------GAAVWGS--SPAIDVIRRQK 200
T + L +R + GG G S G +W S A +
Sbjct: 184 TVNLDMPSLSLRGESAPTTAFGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDR 243
Query: 201 QNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIF 246
++ T P + + + Y ++ ALD+ SG+I W + LG + F
Sbjct: 244 LSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQIMWKRELGSVNDF 289
Score = 41.2 bits (95), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 63/157 (40%), Gaps = 34/157 (21%)
Query: 32 WSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLS----KLTGLSGTGI 87
W + + P V++G+V + NG L A+N +GA+ W NL L G S
Sbjct: 143 WQTKVAGEALSRPVVSDGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTT 202
Query: 88 VVNVTVA-----VVVAVSRSNGELVW---------STQIDPRPRSQITMSGSVYMGAFYV 133
V V AV G+++W ST+ID S + + V G +
Sbjct: 203 AFGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEID--RLSDVDTTPVVVNGVVF- 259
Query: 134 GLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYM 170
+ G+L LD+R+G+I+W+ +
Sbjct: 260 -------------ALAYNGNLTALDLRSGQIMWKREL 283
Score = 38.9 bits (89), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 61/131 (46%), Gaps = 19/131 (14%)
Query: 39 DISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG--LSGTGIVVNVTVAVV 96
D+ TP V NGVV+ ++NG L A++ +G ++W++ L + + G I + V
Sbjct: 246 DVDTTPVVVNGVVFALAYNGNLTALDLRSGQIMWKRELGSVNDFIVDGNRIYLVDQNDRV 305
Query: 97 VAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAK 156
+A++ G +W TQ D R + S +Y G VG S G L
Sbjct: 306 MALTIDGGVTLW-TQSDLLHR--LLTSPVLYNGNLVVGDS--------------EGYLHW 348
Query: 157 LDVRNGRIIWQ 167
++V +GR + Q
Sbjct: 349 INVEDGRFVAQ 359
>gi|398858907|ref|ZP_10614591.1| PQQ-dependent dehydrogenase, methanol/ethanol family [Pseudomonas
sp. GM79]
gi|398238008|gb|EJN23745.1| PQQ-dependent dehydrogenase, methanol/ethanol family [Pseudomonas
sp. GM79]
Length = 591
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 71/351 (20%), Positives = 135/351 (38%), Gaps = 75/351 (21%)
Query: 2 LNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAG----KDISATPAVANGVVYFPSWN 57
+ +G + +RY+ + L N V++LR W+F G + A P + +GV+Y
Sbjct: 45 VTNGLGVQGQRYSPLDTL-NVDNVKDLRPVWAFSFGGEKQRGQQAQPMIKDGVMYMTGSY 103
Query: 58 GYLYAVNAFNGALIWEQN-------------LSKLTGLSGTGIVVNVTVAVVVAVSRSNG 104
++AV+A G +W+ + +++ L G ++ A +VA+++ G
Sbjct: 104 SRVFAVDARTGRKLWQYDARLPDDIRPCCDVINRGVALYGDLVIFGTLDAKLVALNKDTG 163
Query: 105 ELVWSTQI-DPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGR 163
++VWS ++ D + I+ + V G G++ E + G + D +NG
Sbjct: 164 KVVWSKKVADHKEGYSISAAPLVINGKLITGVAGGEFGV--------VGKIEAYDPKNGN 215
Query: 164 IIWQT--------YMLPDNGGKRGGYSGAA--------VW---GSSPAIDVIRRQKQN-- 202
++W Y+ + G SG +W G++P + + N
Sbjct: 216 LLWTRPTVEGHMGYVYKEGKAVENGISGGEAGKTWPGDLWKTGGAAPWLGGYYDPETNLL 275
Query: 203 ---NQTTKPTHPDQCISSDIYANSIVALDIDSGRIAW---AKPLGGYDIFYFTCLVPNNP 256
P + ++Y++S +AL+ D G I W + P G+D LV N
Sbjct: 276 LFGTGNPAPWNSHLRPGDNLYSSSRLALNPDDGTIKWHFQSTPHDGWDYDGVNELVSFN- 334
Query: 257 DCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
+ G+ ++GF + DR +G I
Sbjct: 335 --------------------YNEGGKEIKAAATADRNGFFYVLDRTNGKFI 365
>gi|385232696|ref|YP_005794038.1| precursor of SSDA3 [Ketogulonicigenium vulgare WSH-001]
gi|343461607|gb|AEM40042.1| Precursor of SSDA3 [Ketogulonicigenium vulgare WSH-001]
Length = 578
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 78/340 (22%), Positives = 124/340 (36%), Gaps = 43/340 (12%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWS--FYAGKDISATPAVANGVVYFPSWNG 58
W+N+G + N R++ I V L+L W+ AGK I TP V +GV+Y +
Sbjct: 40 WINYGQNQENYRHS-PLTQITADNVGQLQLVWARGMEAGK-IQVTPLVHDGVMYLANPGD 97
Query: 59 YLYAVNAFNGALIWEQ-----NLSKLT---------GLSGTGIVVNVTVAVVVAVSRSNG 104
+ A++A G LIWE N++ L L GT + +VA+ S G
Sbjct: 98 VIQAIDAATGDLIWEHRRQLPNIATLNSFGEPTRGMALYGTNVYFVSWDNHLVALDTSTG 157
Query: 105 ELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRI 164
++V+ SG + V S+ Q F ++ D G
Sbjct: 158 QVVFDVDRGQGTDMVSNSSGPIVANGVIVAGSTC-------QYSPFGCFVSGHDSATGEE 210
Query: 165 IWQTYMLPDNGGKRGGYSG--------AAVWGSSPAIDVIRRQKQNNQTTKPTHPDQ--C 214
+W+ +P G + G VWG V P Q
Sbjct: 211 LWRNTFIPRAGEEGDETWGNDYEARWMTGVWGQITYDPVGGLVHYGTSAVGPAAEIQRGT 270
Query: 215 ISSDIY-ANSIVALDIDSGRIAWAK---PLGGYDIFYFTCLVPNNPDCPPGPNLDADFGE 270
+ +Y N+ A+ ++G I W P +D ++ N D P ++
Sbjct: 271 VGGSMYGTNTRFAVRPETGEIVWRHQTLPRDNWDQECTFEMMVVNVDVQPSAEMEGLHAI 330
Query: 271 APMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDIIWFK 310
P T G R V K+G W FD ++G+ +W +
Sbjct: 331 NPDAAT----GERRVVTGVPCKNGTMWQFDAETGEFLWAR 366
>gi|194427386|ref|ZP_03059936.1| outer membrane assembly lipoprotein YfgL [Escherichia coli B171]
gi|415803707|ref|ZP_11500686.1| outer membrane assembly lipoprotein YfgL [Escherichia coli E128010]
gi|419307357|ref|ZP_13849256.1| outer membrane assembly lipoprotein YfgL [Escherichia coli DEC11D]
gi|419312367|ref|ZP_13854229.1| outer membrane assembly lipoprotein YfgL [Escherichia coli DEC11E]
gi|419317803|ref|ZP_13859605.1| outer membrane assembly lipoprotein YfgL [Escherichia coli DEC12A]
gi|419323952|ref|ZP_13865645.1| outer membrane assembly lipoprotein YfgL [Escherichia coli DEC12B]
gi|419329941|ref|ZP_13871545.1| outer membrane assembly lipoprotein YfgL [Escherichia coli DEC12C]
gi|419335574|ref|ZP_13877099.1| outer membrane assembly lipoprotein YfgL [Escherichia coli DEC12D]
gi|419340951|ref|ZP_13882415.1| outer membrane assembly lipoprotein YfgL [Escherichia coli DEC12E]
gi|420392258|ref|ZP_14891509.1| outer membrane assembly lipoprotein YfgL [Escherichia coli EPEC
C342-62]
gi|194414707|gb|EDX30979.1| outer membrane assembly lipoprotein YfgL [Escherichia coli B171]
gi|323159382|gb|EFZ45367.1| outer membrane assembly lipoprotein YfgL [Escherichia coli E128010]
gi|378148340|gb|EHX09480.1| outer membrane assembly lipoprotein YfgL [Escherichia coli DEC11D]
gi|378157995|gb|EHX19026.1| outer membrane assembly lipoprotein YfgL [Escherichia coli DEC11E]
gi|378165028|gb|EHX25969.1| outer membrane assembly lipoprotein YfgL [Escherichia coli DEC12B]
gi|378168496|gb|EHX29400.1| outer membrane assembly lipoprotein YfgL [Escherichia coli DEC12A]
gi|378170257|gb|EHX31143.1| outer membrane assembly lipoprotein YfgL [Escherichia coli DEC12C]
gi|378181006|gb|EHX41683.1| outer membrane assembly lipoprotein YfgL [Escherichia coli DEC12D]
gi|378187862|gb|EHX48473.1| outer membrane assembly lipoprotein YfgL [Escherichia coli DEC12E]
gi|391312025|gb|EIQ69648.1| outer membrane assembly lipoprotein YfgL [Escherichia coli EPEC
C342-62]
Length = 392
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 94/226 (41%), Gaps = 24/226 (10%)
Query: 44 PAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG--------------LSGTGIVV 89
PA+A+ VVY G + A+NA +G IW +L++ G +SG + +
Sbjct: 65 PALADNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVSGGHVYI 124
Query: 90 NVTVAVVVAVSRSNGELVWSTQIDPRPRSQ-ITMSGSVYMGAFYVGLSSLEEALPADQCC 148
A V A++ S+G + W T++ S+ + G V + L +L EA A +
Sbjct: 125 GSEKAQVYALNTSDGTVAWQTKVAGEALSRPVVSDGLVLIHTSNGQLQALNEADGAVK-W 183
Query: 149 TFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYS------GAAVWGS--SPAIDVIRRQK 200
T + L +R + GG G S G +W S A +
Sbjct: 184 TVNLDMPSLSLRGESAPATAFGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDR 243
Query: 201 QNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIF 246
++ T P + + + Y ++ ALD+ SG+I W + LG + F
Sbjct: 244 LSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQIMWKRELGSVNDF 289
Score = 42.0 bits (97), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 63/157 (40%), Gaps = 34/157 (21%)
Query: 32 WSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLS----KLTGLSGTGI 87
W + + P V++G+V + NG L A+N +GA+ W NL L G S
Sbjct: 143 WQTKVAGEALSRPVVSDGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPAT 202
Query: 88 VVNVTVA-----VVVAVSRSNGELVW---------STQIDPRPRSQITMSGSVYMGAFYV 133
V V AV G+++W ST+ID S + + V G +
Sbjct: 203 AFGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEID--RLSDVDTTPVVVNGVVF- 259
Query: 134 GLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYM 170
+ G+L LD+R+G+I+W+ +
Sbjct: 260 -------------ALAYNGNLTALDLRSGQIMWKREL 283
Score = 37.7 bits (86), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 61/131 (46%), Gaps = 19/131 (14%)
Query: 39 DISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG--LSGTGIVVNVTVAVV 96
D+ TP V NGVV+ ++NG L A++ +G ++W++ L + + G I + V
Sbjct: 246 DVDTTPVVVNGVVFALAYNGNLTALDLRSGQIMWKRELGSVNDFIVDGNHIYLVDQNDRV 305
Query: 97 VAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAK 156
+A++ G +W+ Q D R + S +Y G VG S G L
Sbjct: 306 MALTIDGGVTLWA-QSDLLHR--LLTSPVLYNGNLVVGDS--------------EGYLHW 348
Query: 157 LDVRNGRIIWQ 167
++V +GR + Q
Sbjct: 349 INVEDGRFVAQ 359
>gi|322812787|pdb|3Q7O|A Chain A, The Crystal Structure Of Bamb From The Bam Complex In
Spacegroup P213
Length = 376
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 94/226 (41%), Gaps = 24/226 (10%)
Query: 44 PAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG--------------LSGTGIVV 89
PA+A+ VVY G + A+NA +G IW +L++ G +SG + +
Sbjct: 49 PALADNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVSGGHVYI 108
Query: 90 NVTVAVVVAVSRSNGELVWSTQIDPRPRSQ-ITMSGSVYMGAFYVGLSSLEEALPADQCC 148
A V A++ S+G + W T++ S+ + G V + L +L EA A +
Sbjct: 109 GSEKAQVYALNTSDGTVAWQTKVAGEALSRPVVSDGLVLIHTSNGQLQALNEADGAVK-W 167
Query: 149 TFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYS------GAAVWGS--SPAIDVIRRQK 200
T + L +R + GG G S G +W S A +
Sbjct: 168 TVNLDMPSLSLRGESAPTTAFGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDR 227
Query: 201 QNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIF 246
++ T P + + + Y ++ ALD+ SG+I W + LG + F
Sbjct: 228 LSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQIMWKRELGSVNDF 273
Score = 41.2 bits (95), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 63/157 (40%), Gaps = 34/157 (21%)
Query: 32 WSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLS----KLTGLSGTGI 87
W + + P V++G+V + NG L A+N +GA+ W NL L G S
Sbjct: 127 WQTKVAGEALSRPVVSDGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTT 186
Query: 88 VVNVTVA-----VVVAVSRSNGELVW---------STQIDPRPRSQITMSGSVYMGAFYV 133
V V AV G+++W ST+ID S + + V G +
Sbjct: 187 AFGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEID--RLSDVDTTPVVVNGVVF- 243
Query: 134 GLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYM 170
+ G+L LD+R+G+I+W+ +
Sbjct: 244 -------------ALAYNGNLTALDLRSGQIMWKREL 267
Score = 38.9 bits (89), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 61/131 (46%), Gaps = 19/131 (14%)
Query: 39 DISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG--LSGTGIVVNVTVAVV 96
D+ TP V NGVV+ ++NG L A++ +G ++W++ L + + G I + V
Sbjct: 230 DVDTTPVVVNGVVFALAYNGNLTALDLRSGQIMWKRELGSVNDFIVDGNRIYLVDQNDRV 289
Query: 97 VAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAK 156
+A++ G +W TQ D R + S +Y G VG S G L
Sbjct: 290 MALTIDGGVTLW-TQSDLLHR--LLTSPVLYNGNLVVGDS--------------EGYLHW 332
Query: 157 LDVRNGRIIWQ 167
++V +GR + Q
Sbjct: 333 INVEDGRFVAQ 343
>gi|74313038|ref|YP_311457.1| outer membrane protein assembly complex subunit YfgL [Shigella
sonnei Ss046]
gi|82777897|ref|YP_404246.1| outer membrane protein assembly complex subunit YfgL [Shigella
dysenteriae Sd197]
gi|157155949|ref|YP_001463834.1| outer membrane protein assembly complex subunit YfgL [Escherichia
coli E24377A]
gi|157161987|ref|YP_001459305.1| outer membrane protein assembly complex subunit YfgL [Escherichia
coli HS]
gi|170019205|ref|YP_001724159.1| outer membrane protein assembly complex subunit YfgL [Escherichia
coli ATCC 8739]
gi|194437685|ref|ZP_03069781.1| outer membrane assembly lipoprotein YfgL [Escherichia coli 101-1]
gi|218706015|ref|YP_002413534.1| outer membrane protein assembly complex subunit YfgL [Escherichia
coli UMN026]
gi|251785837|ref|YP_003000141.1| BamB, subunit of Outer Membrane Protein Assembly Complex
[Escherichia coli BL21(DE3)]
gi|253772594|ref|YP_003035425.1| outer membrane protein assembly complex subunit YfgL [Escherichia
coli 'BL21-Gold(DE3)pLysS AG']
gi|254162486|ref|YP_003045594.1| outer membrane protein assembly complex subunit YfgL [Escherichia
coli B str. REL606]
gi|254289247|ref|YP_003054995.1| protein assembly complex, lipoprotein component [Escherichia coli
BL21(DE3)]
gi|291283733|ref|YP_003500551.1| outer membrane assembly lipoprotein YfgL [Escherichia coli O55:H7
str. CB9615]
gi|293405953|ref|ZP_06649945.1| lipoprotein yfgL [Escherichia coli FVEC1412]
gi|293415777|ref|ZP_06658420.1| outer membrane assembly lipoprotein YfgL [Escherichia coli B185]
gi|298381754|ref|ZP_06991353.1| lipoprotein yfgL [Escherichia coli FVEC1302]
gi|300820818|ref|ZP_07100968.1| outer membrane assembly lipoprotein YfgL [Escherichia coli MS
119-7]
gi|300898384|ref|ZP_07116727.1| outer membrane assembly lipoprotein YfgL [Escherichia coli MS
198-1]
gi|300920667|ref|ZP_07137078.1| outer membrane assembly lipoprotein YfgL [Escherichia coli MS
115-1]
gi|300930152|ref|ZP_07145573.1| outer membrane assembly lipoprotein YfgL [Escherichia coli MS
187-1]
gi|300951783|ref|ZP_07165598.1| outer membrane assembly lipoprotein YfgL [Escherichia coli MS
116-1]
gi|300958858|ref|ZP_07170966.1| outer membrane assembly lipoprotein YfgL [Escherichia coli MS
175-1]
gi|301024744|ref|ZP_07188384.1| outer membrane assembly lipoprotein YfgL [Escherichia coli MS 69-1]
gi|301648267|ref|ZP_07248010.1| outer membrane assembly lipoprotein YfgL [Escherichia coli MS
146-1]
gi|309784737|ref|ZP_07679370.1| outer membrane assembly lipoprotein YfgL [Shigella dysenteriae
1617]
gi|312973247|ref|ZP_07787419.1| outer membrane assembly lipoprotein YfgL [Escherichia coli 1827-70]
gi|331643132|ref|ZP_08344267.1| outer membrane assembly lipoprotein YfgL [Escherichia coli H736]
gi|331653940|ref|ZP_08354941.1| outer membrane assembly lipoprotein YfgL [Escherichia coli M718]
gi|331664075|ref|ZP_08364985.1| outer membrane assembly lipoprotein YfgL [Escherichia coli TA143]
gi|331673967|ref|ZP_08374730.1| outer membrane assembly lipoprotein YfgL [Escherichia coli TA280]
gi|331678503|ref|ZP_08379178.1| outer membrane assembly lipoprotein YfgL [Escherichia coli H591]
gi|383179522|ref|YP_005457527.1| outer membrane biogenesis protein BamB [Shigella sonnei 53G]
gi|386281579|ref|ZP_10059241.1| lipoprotein yfgL [Escherichia sp. 4_1_40B]
gi|386615215|ref|YP_006134881.1| outer membrane assembly lipoprotein YfgL [Escherichia coli UMNK88]
gi|386705777|ref|YP_006169624.1| Outer membrane assembly lipoprotein YfgL [Escherichia coli P12b]
gi|387507877|ref|YP_006160133.1| outer membrane biogenesis protein BamB [Escherichia coli O55:H7
str. RM12579]
gi|387608162|ref|YP_006097018.1| putative dehydrogenase [Escherichia coli 042]
gi|387613108|ref|YP_006116224.1| putative dehydrogenase [Escherichia coli ETEC H10407]
gi|404375853|ref|ZP_10981033.1| lipoprotein yfgL [Escherichia sp. 1_1_43]
gi|414577233|ref|ZP_11434412.1| outer membrane assembly lipoprotein YfgL [Shigella sonnei 3233-85]
gi|415778568|ref|ZP_11489614.1| outer membrane assembly lipoprotein YfgL [Escherichia coli 3431]
gi|415844088|ref|ZP_11523892.1| outer membrane assembly lipoprotein YfgL [Shigella sonnei 53G]
gi|416344044|ref|ZP_11677944.1| outer membrane protein assembly complex subunit YfgL [Escherichia
coli EC4100B]
gi|416775876|ref|ZP_11874612.1| outer membrane biogenesis protein BamB [Escherichia coli O157:H7
str. G5101]
gi|416787460|ref|ZP_11879524.1| outer membrane biogenesis protein BamB [Escherichia coli O157:H-
str. 493-89]
gi|416799090|ref|ZP_11884439.1| outer membrane biogenesis protein BamB [Escherichia coli O157:H-
str. H 2687]
gi|416809522|ref|ZP_11889124.1| outer membrane biogenesis protein BamB [Escherichia coli O55:H7
str. 3256-97]
gi|416820193|ref|ZP_11893682.1| outer membrane biogenesis protein BamB [Escherichia coli O55:H7
str. USDA 5905]
gi|416831013|ref|ZP_11898972.1| outer membrane biogenesis protein BamB [Escherichia coli O157:H7
str. LSU-61]
gi|417140842|ref|ZP_11983953.1| outer membrane assembly lipoprotein YfgL [Escherichia coli 97.0259]
gi|417261426|ref|ZP_12048914.1| outer membrane assembly lipoprotein YfgL [Escherichia coli 2.3916]
gi|417271986|ref|ZP_12059335.1| outer membrane assembly lipoprotein YfgL [Escherichia coli 2.4168]
gi|417278121|ref|ZP_12065437.1| outer membrane assembly lipoprotein YfgL [Escherichia coli 3.2303]
gi|417291401|ref|ZP_12078682.1| outer membrane assembly lipoprotein YfgL [Escherichia coli B41]
gi|417308997|ref|ZP_12095838.1| Lipoprotein yfgL [Escherichia coli PCN033]
gi|417587511|ref|ZP_12238280.1| outer membrane assembly lipoprotein YfgL [Escherichia coli
STEC_C165-02]
gi|417613978|ref|ZP_12264436.1| outer membrane assembly lipoprotein YfgL [Escherichia coli
STEC_EH250]
gi|417619096|ref|ZP_12269510.1| outer membrane assembly lipoprotein YfgL [Escherichia coli G58-1]
gi|417629811|ref|ZP_12280048.1| outer membrane assembly lipoprotein YfgL [Escherichia coli
STEC_MHI813]
gi|417635484|ref|ZP_12285696.1| outer membrane assembly lipoprotein YfgL [Escherichia coli
STEC_S1191]
gi|418041592|ref|ZP_12679811.1| outer membrane assembly lipoprotein YfgL [Escherichia coli W26]
gi|418267008|ref|ZP_12886451.1| outer membrane assembly lipoprotein YfgL [Shigella sonnei str.
Moseley]
gi|418303961|ref|ZP_12915755.1| outer membrane assembly lipoprotein YfgL [Escherichia coli UMNF18]
gi|419076582|ref|ZP_13622096.1| outer membrane assembly lipoprotein YfgL [Escherichia coli DEC3F]
gi|419115895|ref|ZP_13660911.1| outer membrane assembly lipoprotein YfgL [Escherichia coli DEC5A]
gi|419121466|ref|ZP_13666422.1| outer membrane assembly lipoprotein YfgL [Escherichia coli DEC5B]
gi|419127007|ref|ZP_13671891.1| outer membrane assembly lipoprotein YfgL [Escherichia coli DEC5C]
gi|419132526|ref|ZP_13677363.1| outer membrane assembly lipoprotein YfgL [Escherichia coli DEC5D]
gi|419137562|ref|ZP_13682357.1| outer membrane assembly lipoprotein YfgL [Escherichia coli DEC5E]
gi|419143462|ref|ZP_13688200.1| outer membrane assembly lipoprotein YfgL [Escherichia coli DEC6A]
gi|419149287|ref|ZP_13693940.1| outer membrane assembly lipoprotein YfgL [Escherichia coli DEC6B]
gi|419154911|ref|ZP_13699472.1| outer membrane assembly lipoprotein YfgL [Escherichia coli DEC6C]
gi|419160198|ref|ZP_13704703.1| outer membrane assembly lipoprotein YfgL [Escherichia coli DEC6D]
gi|419165315|ref|ZP_13709771.1| outer membrane assembly lipoprotein YfgL [Escherichia coli DEC6E]
gi|419175973|ref|ZP_13719789.1| outer membrane assembly lipoprotein YfgL [Escherichia coli DEC7B]
gi|419346159|ref|ZP_13887533.1| outer membrane assembly lipoprotein YfgL [Escherichia coli DEC13A]
gi|419350619|ref|ZP_13891956.1| outer membrane assembly lipoprotein YfgL [Escherichia coli DEC13B]
gi|419356042|ref|ZP_13897299.1| outer membrane assembly lipoprotein YfgL [Escherichia coli DEC13C]
gi|419361136|ref|ZP_13902353.1| outer membrane assembly lipoprotein YfgL [Escherichia coli DEC13D]
gi|419366208|ref|ZP_13907369.1| outer membrane assembly lipoprotein YfgL [Escherichia coli DEC13E]
gi|419810221|ref|ZP_14335103.1| outer membrane biogenesis protein BamB [Escherichia coli O32:H37
str. P4]
gi|419865996|ref|ZP_14388367.1| outer membrane biogenesis protein BamB [Escherichia coli O103:H25
str. CVM9340]
gi|419920348|ref|ZP_14438466.1| outer membrane protein assembly complex subunit YfgL [Escherichia
coli KD2]
gi|419921566|ref|ZP_14439618.1| outer membrane protein assembly complex subunit YfgL [Escherichia
coli 541-15]
gi|419933196|ref|ZP_14450464.1| outer membrane protein assembly complex subunit YfgL [Escherichia
coli 576-1]
gi|419939149|ref|ZP_14455950.1| outer membrane protein assembly complex subunit YfgL [Escherichia
coli 75]
gi|419950854|ref|ZP_14467059.1| outer membrane protein assembly complex subunit YfgL [Escherichia
coli CUMT8]
gi|420281678|ref|ZP_14783914.1| outer membrane assembly lipoprotein YfgL [Escherichia coli TW06591]
gi|420359712|ref|ZP_14860682.1| outer membrane assembly lipoprotein YfgL [Shigella sonnei 3226-85]
gi|420363934|ref|ZP_14864817.1| outer membrane assembly lipoprotein YfgL [Shigella sonnei 4822-66]
gi|421774680|ref|ZP_16211292.1| outer membrane assembly lipoprotein YfgL [Escherichia coli AD30]
gi|422333544|ref|ZP_16414554.1| lipoprotein yfgL [Escherichia coli 4_1_47FAA]
gi|422787129|ref|ZP_16839868.1| outer membrane assembly lipoprotein YfgL [Escherichia coli H489]
gi|422792452|ref|ZP_16845152.1| outer membrane assembly lipoprotein YfgL [Escherichia coli TA007]
gi|422819336|ref|ZP_16867547.1| lipoprotein yfgL [Escherichia coli M919]
gi|422972907|ref|ZP_16975519.1| lipoprotein yfgL [Escherichia coli TA124]
gi|423704109|ref|ZP_17678534.1| lipoprotein yfgL [Escherichia coli H730]
gi|425115989|ref|ZP_18517788.1| outer membrane assembly lipoprotein YfgL [Escherichia coli 8.0566]
gi|425120754|ref|ZP_18522450.1| outer membrane assembly lipoprotein YfgL [Escherichia coli 8.0569]
gi|425145202|ref|ZP_18545204.1| outer membrane assembly lipoprotein YfgL [Escherichia coli 10.0869]
gi|425250256|ref|ZP_18643202.1| outer membrane assembly lipoprotein YfgL [Escherichia coli 5905]
gi|425262345|ref|ZP_18654362.1| outer membrane assembly lipoprotein YfgL [Escherichia coli EC96038]
gi|425268342|ref|ZP_18659980.1| outer membrane assembly lipoprotein YfgL [Escherichia coli 5412]
gi|425273662|ref|ZP_18665073.1| outer membrane assembly lipoprotein YfgL [Escherichia coli TW15901]
gi|425284207|ref|ZP_18675245.1| outer membrane assembly lipoprotein YfgL [Escherichia coli TW00353]
gi|432354428|ref|ZP_19597699.1| lipoprotein yfgL [Escherichia coli KTE2]
gi|432370735|ref|ZP_19613820.1| lipoprotein yfgL [Escherichia coli KTE10]
gi|432402777|ref|ZP_19645529.1| lipoprotein yfgL [Escherichia coli KTE26]
gi|432427043|ref|ZP_19669542.1| lipoprotein yfgL [Escherichia coli KTE181]
gi|432450644|ref|ZP_19692906.1| lipoprotein yfgL [Escherichia coli KTE193]
gi|432461509|ref|ZP_19703656.1| lipoprotein yfgL [Escherichia coli KTE204]
gi|432476733|ref|ZP_19718730.1| lipoprotein yfgL [Escherichia coli KTE208]
gi|432490280|ref|ZP_19732149.1| lipoprotein yfgL [Escherichia coli KTE213]
gi|432518611|ref|ZP_19755797.1| lipoprotein yfgL [Escherichia coli KTE228]
gi|432534833|ref|ZP_19771805.1| lipoprotein yfgL [Escherichia coli KTE234]
gi|432538734|ref|ZP_19775634.1| lipoprotein yfgL [Escherichia coli KTE235]
gi|432544097|ref|ZP_19780939.1| lipoprotein yfgL [Escherichia coli KTE236]
gi|432549588|ref|ZP_19786354.1| lipoprotein yfgL [Escherichia coli KTE237]
gi|432564802|ref|ZP_19801382.1| lipoprotein yfgL [Escherichia coli KTE51]
gi|432576775|ref|ZP_19813232.1| lipoprotein yfgL [Escherichia coli KTE56]
gi|432603143|ref|ZP_19839387.1| lipoprotein yfgL [Escherichia coli KTE66]
gi|432622743|ref|ZP_19858771.1| lipoprotein yfgL [Escherichia coli KTE76]
gi|432628136|ref|ZP_19864112.1| lipoprotein yfgL [Escherichia coli KTE77]
gi|432632273|ref|ZP_19868198.1| lipoprotein yfgL [Escherichia coli KTE80]
gi|432637754|ref|ZP_19873623.1| lipoprotein yfgL [Escherichia coli KTE81]
gi|432641989|ref|ZP_19877821.1| lipoprotein yfgL [Escherichia coli KTE83]
gi|432661723|ref|ZP_19897363.1| lipoprotein yfgL [Escherichia coli KTE111]
gi|432666938|ref|ZP_19902517.1| lipoprotein yfgL [Escherichia coli KTE116]
gi|432671617|ref|ZP_19907145.1| lipoprotein yfgL [Escherichia coli KTE119]
gi|432686338|ref|ZP_19921633.1| lipoprotein yfgL [Escherichia coli KTE156]
gi|432692460|ref|ZP_19927687.1| lipoprotein yfgL [Escherichia coli KTE161]
gi|432705290|ref|ZP_19940389.1| lipoprotein yfgL [Escherichia coli KTE171]
gi|432719660|ref|ZP_19954628.1| lipoprotein yfgL [Escherichia coli KTE9]
gi|432738003|ref|ZP_19972760.1| lipoprotein yfgL [Escherichia coli KTE42]
gi|432771464|ref|ZP_20005789.1| lipoprotein yfgL [Escherichia coli KTE50]
gi|432775592|ref|ZP_20009861.1| lipoprotein yfgL [Escherichia coli KTE54]
gi|432793703|ref|ZP_20027787.1| lipoprotein yfgL [Escherichia coli KTE78]
gi|432799662|ref|ZP_20033683.1| lipoprotein yfgL [Escherichia coli KTE79]
gi|432816239|ref|ZP_20050022.1| lipoprotein yfgL [Escherichia coli KTE115]
gi|432840304|ref|ZP_20073769.1| lipoprotein yfgL [Escherichia coli KTE140]
gi|432869848|ref|ZP_20090441.1| lipoprotein yfgL [Escherichia coli KTE147]
gi|432876257|ref|ZP_20094297.1| lipoprotein yfgL [Escherichia coli KTE154]
gi|432887489|ref|ZP_20101542.1| lipoprotein yfgL [Escherichia coli KTE158]
gi|432913729|ref|ZP_20119362.1| lipoprotein yfgL [Escherichia coli KTE190]
gi|432948359|ref|ZP_20143515.1| lipoprotein yfgL [Escherichia coli KTE196]
gi|432956066|ref|ZP_20147885.1| lipoprotein yfgL [Escherichia coli KTE197]
gi|432962777|ref|ZP_20152309.1| lipoprotein yfgL [Escherichia coli KTE202]
gi|432968591|ref|ZP_20157505.1| lipoprotein yfgL [Escherichia coli KTE203]
gi|433019575|ref|ZP_20207775.1| lipoprotein yfgL [Escherichia coli KTE105]
gi|433034338|ref|ZP_20222047.1| lipoprotein yfgL [Escherichia coli KTE112]
gi|433044064|ref|ZP_20231558.1| lipoprotein yfgL [Escherichia coli KTE117]
gi|433048928|ref|ZP_20236275.1| lipoprotein yfgL [Escherichia coli KTE120]
gi|433054156|ref|ZP_20241330.1| lipoprotein yfgL [Escherichia coli KTE122]
gi|433063952|ref|ZP_20250871.1| lipoprotein yfgL [Escherichia coli KTE125]
gi|433068802|ref|ZP_20255588.1| lipoprotein yfgL [Escherichia coli KTE128]
gi|433159557|ref|ZP_20344392.1| lipoprotein yfgL [Escherichia coli KTE177]
gi|433179347|ref|ZP_20363742.1| lipoprotein yfgL [Escherichia coli KTE82]
gi|433204181|ref|ZP_20387948.1| lipoprotein yfgL [Escherichia coli KTE95]
gi|442592529|ref|ZP_21010504.1| Outer membrane protein YfgL, lipoprotein component of the protein
assembly complex (forms a complex with YaeT, YfiO, and
NlpB) [Escherichia coli O10:K5(L):H4 str. ATCC 23506]
gi|442599043|ref|ZP_21016778.1| Outer membrane protein YfgL, lipoprotein component of the protein
assembly complex (forms a complex with YaeT, YfiO, and
NlpB) [Escherichia coli O5:K4(L):H4 str. ATCC 23502]
gi|445013336|ref|ZP_21329447.1| outer membrane assembly lipoprotein YfgL [Escherichia coli PA48]
gi|123561918|sp|Q32D50.1|BAMB_SHIDS RecName: Full=Outer membrane protein assembly factor BamB; Flags:
Precursor
gi|73856515|gb|AAZ89222.1| putative dehydrogenase [Shigella sonnei Ss046]
gi|81242045|gb|ABB62755.1| putative dehydrogenase [Shigella dysenteriae Sd197]
gi|157067667|gb|ABV06922.1| outer membrane assembly lipoprotein YfgL [Escherichia coli HS]
gi|157077979|gb|ABV17687.1| outer membrane assembly lipoprotein YfgL [Escherichia coli E24377A]
gi|169754133|gb|ACA76832.1| outer membrane assembly lipoprotein YfgL [Escherichia coli ATCC
8739]
gi|194423491|gb|EDX39482.1| outer membrane assembly lipoprotein YfgL [Escherichia coli 101-1]
gi|209763408|gb|ACI80016.1| putative dehydrogenase [Escherichia coli]
gi|209763414|gb|ACI80019.1| putative dehydrogenase [Escherichia coli]
gi|218433112|emb|CAR14009.1| protein assembly complex, lipoprotein component [Escherichia coli
UMN026]
gi|242378110|emb|CAQ32883.1| BamB, subunit of Outer Membrane Protein Assembly Complex
[Escherichia coli BL21(DE3)]
gi|253323638|gb|ACT28240.1| outer membrane assembly lipoprotein YfgL [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|253974387|gb|ACT40058.1| protein assembly complex, lipoprotein component [Escherichia coli B
str. REL606]
gi|253978554|gb|ACT44224.1| protein assembly complex, lipoprotein component [Escherichia coli
BL21(DE3)]
gi|284922462|emb|CBG35549.1| putative dehydrogenase [Escherichia coli 042]
gi|290763606|gb|ADD57567.1| Outer membrane assembly lipoprotein YfgL [Escherichia coli O55:H7
str. CB9615]
gi|291428161|gb|EFF01188.1| lipoprotein yfgL [Escherichia coli FVEC1412]
gi|291433425|gb|EFF06404.1| outer membrane assembly lipoprotein YfgL [Escherichia coli B185]
gi|298279196|gb|EFI20710.1| lipoprotein yfgL [Escherichia coli FVEC1302]
gi|300314510|gb|EFJ64294.1| outer membrane assembly lipoprotein YfgL [Escherichia coli MS
175-1]
gi|300357924|gb|EFJ73794.1| outer membrane assembly lipoprotein YfgL [Escherichia coli MS
198-1]
gi|300396413|gb|EFJ79951.1| outer membrane assembly lipoprotein YfgL [Escherichia coli MS 69-1]
gi|300412348|gb|EFJ95658.1| outer membrane assembly lipoprotein YfgL [Escherichia coli MS
115-1]
gi|300448980|gb|EFK12600.1| outer membrane assembly lipoprotein YfgL [Escherichia coli MS
116-1]
gi|300461958|gb|EFK25451.1| outer membrane assembly lipoprotein YfgL [Escherichia coli MS
187-1]
gi|300526571|gb|EFK47640.1| outer membrane assembly lipoprotein YfgL [Escherichia coli MS
119-7]
gi|301073654|gb|EFK88460.1| outer membrane assembly lipoprotein YfgL [Escherichia coli MS
146-1]
gi|308927107|gb|EFP72581.1| outer membrane assembly lipoprotein YfgL [Shigella dysenteriae
1617]
gi|309702844|emb|CBJ02175.1| putative dehydrogenase [Escherichia coli ETEC H10407]
gi|310331842|gb|EFP99077.1| outer membrane assembly lipoprotein YfgL [Escherichia coli 1827-70]
gi|315615771|gb|EFU96403.1| outer membrane assembly lipoprotein YfgL [Escherichia coli 3431]
gi|320200076|gb|EFW74665.1| outer membrane protein assembly complex subunit YfgL [Escherichia
coli EC4100B]
gi|320640856|gb|EFX10344.1| outer membrane biogenesis protein BamB [Escherichia coli O157:H7
str. G5101]
gi|320646299|gb|EFX15226.1| outer membrane biogenesis protein BamB [Escherichia coli O157:H-
str. 493-89]
gi|320651804|gb|EFX20184.1| outer membrane biogenesis protein BamB [Escherichia coli O157:H-
str. H 2687]
gi|320657190|gb|EFX24999.1| outer membrane biogenesis protein BamB [Escherichia coli O55:H7
str. 3256-97 TW 07815]
gi|320662796|gb|EFX30128.1| outer membrane biogenesis protein BamB [Escherichia coli O55:H7
str. USDA 5905]
gi|320667600|gb|EFX34515.1| outer membrane biogenesis protein BamB [Escherichia coli O157:H7
str. LSU-61]
gi|323169044|gb|EFZ54721.1| outer membrane assembly lipoprotein YfgL [Shigella sonnei 53G]
gi|323961328|gb|EGB56940.1| outer membrane assembly lipoprotein YfgL [Escherichia coli H489]
gi|323971075|gb|EGB66323.1| outer membrane assembly lipoprotein YfgL [Escherichia coli TA007]
gi|331039930|gb|EGI12150.1| outer membrane assembly lipoprotein YfgL [Escherichia coli H736]
gi|331048789|gb|EGI20865.1| outer membrane assembly lipoprotein YfgL [Escherichia coli M718]
gi|331059874|gb|EGI31851.1| outer membrane assembly lipoprotein YfgL [Escherichia coli TA143]
gi|331069240|gb|EGI40632.1| outer membrane assembly lipoprotein YfgL [Escherichia coli TA280]
gi|331074963|gb|EGI46283.1| outer membrane assembly lipoprotein YfgL [Escherichia coli H591]
gi|332344384|gb|AEE57718.1| outer membrane assembly lipoprotein YfgL [Escherichia coli UMNK88]
gi|338769625|gb|EGP24404.1| Lipoprotein yfgL [Escherichia coli PCN033]
gi|339416059|gb|AEJ57731.1| outer membrane assembly lipoprotein YfgL [Escherichia coli UMNF18]
gi|345335541|gb|EGW67979.1| outer membrane assembly lipoprotein YfgL [Escherichia coli
STEC_C165-02]
gi|345362172|gb|EGW94329.1| outer membrane assembly lipoprotein YfgL [Escherichia coli
STEC_EH250]
gi|345372558|gb|EGX04522.1| outer membrane assembly lipoprotein YfgL [Escherichia coli
STEC_MHI813]
gi|345375810|gb|EGX07757.1| outer membrane assembly lipoprotein YfgL [Escherichia coli G58-1]
gi|345387024|gb|EGX16853.1| outer membrane assembly lipoprotein YfgL [Escherichia coli
STEC_S1191]
gi|371597540|gb|EHN86361.1| lipoprotein yfgL [Escherichia coli TA124]
gi|373245515|gb|EHP64983.1| lipoprotein yfgL [Escherichia coli 4_1_47FAA]
gi|374359871|gb|AEZ41578.1| outer membrane biogenesis protein BamB [Escherichia coli O55:H7
str. RM12579]
gi|377920979|gb|EHU84993.1| outer membrane assembly lipoprotein YfgL [Escherichia coli DEC3F]
gi|377960004|gb|EHV23495.1| outer membrane assembly lipoprotein YfgL [Escherichia coli DEC5A]
gi|377966690|gb|EHV30101.1| outer membrane assembly lipoprotein YfgL [Escherichia coli DEC5B]
gi|377974063|gb|EHV37392.1| outer membrane assembly lipoprotein YfgL [Escherichia coli DEC5C]
gi|377975489|gb|EHV38810.1| outer membrane assembly lipoprotein YfgL [Escherichia coli DEC5D]
gi|377983979|gb|EHV47220.1| outer membrane assembly lipoprotein YfgL [Escherichia coli DEC5E]
gi|377992409|gb|EHV55556.1| outer membrane assembly lipoprotein YfgL [Escherichia coli DEC6B]
gi|377993975|gb|EHV57106.1| outer membrane assembly lipoprotein YfgL [Escherichia coli DEC6A]
gi|377995844|gb|EHV58955.1| outer membrane assembly lipoprotein YfgL [Escherichia coli DEC6C]
gi|378007542|gb|EHV70511.1| outer membrane assembly lipoprotein YfgL [Escherichia coli DEC6D]
gi|378009767|gb|EHV72721.1| outer membrane assembly lipoprotein YfgL [Escherichia coli DEC6E]
gi|378031945|gb|EHV94527.1| outer membrane assembly lipoprotein YfgL [Escherichia coli DEC7B]
gi|378185607|gb|EHX46232.1| outer membrane assembly lipoprotein YfgL [Escherichia coli DEC13A]
gi|378199880|gb|EHX60339.1| outer membrane assembly lipoprotein YfgL [Escherichia coli DEC13B]
gi|378200304|gb|EHX60760.1| outer membrane assembly lipoprotein YfgL [Escherichia coli DEC13C]
gi|378202783|gb|EHX63210.1| outer membrane assembly lipoprotein YfgL [Escherichia coli DEC13D]
gi|378212517|gb|EHX72840.1| outer membrane assembly lipoprotein YfgL [Escherichia coli DEC13E]
gi|383103945|gb|AFG41454.1| Outer membrane assembly lipoprotein YfgL [Escherichia coli P12b]
gi|383475451|gb|EID67411.1| outer membrane assembly lipoprotein YfgL [Escherichia coli W26]
gi|385156943|gb|EIF18937.1| outer membrane biogenesis protein BamB [Escherichia coli O32:H37
str. P4]
gi|385537115|gb|EIF83998.1| lipoprotein yfgL [Escherichia coli M919]
gi|385707225|gb|EIG44257.1| lipoprotein yfgL [Escherichia coli H730]
gi|386121718|gb|EIG70333.1| lipoprotein yfgL [Escherichia sp. 4_1_40B]
gi|386156175|gb|EIH12522.1| outer membrane assembly lipoprotein YfgL [Escherichia coli 97.0259]
gi|386224553|gb|EII46888.1| outer membrane assembly lipoprotein YfgL [Escherichia coli 2.3916]
gi|386235686|gb|EII67662.1| outer membrane assembly lipoprotein YfgL [Escherichia coli 2.4168]
gi|386239089|gb|EII76023.1| outer membrane assembly lipoprotein YfgL [Escherichia coli 3.2303]
gi|386253723|gb|EIJ03413.1| outer membrane assembly lipoprotein YfgL [Escherichia coli B41]
gi|388336177|gb|EIL02724.1| outer membrane biogenesis protein BamB [Escherichia coli O103:H25
str. CVM9340]
gi|388384880|gb|EIL46586.1| outer membrane protein assembly complex subunit YfgL [Escherichia
coli KD2]
gi|388397517|gb|EIL58495.1| outer membrane protein assembly complex subunit YfgL [Escherichia
coli 541-15]
gi|388408640|gb|EIL68981.1| outer membrane protein assembly complex subunit YfgL [Escherichia
coli 75]
gi|388414226|gb|EIL74192.1| outer membrane protein assembly complex subunit YfgL [Escherichia
coli 576-1]
gi|388415960|gb|EIL75867.1| outer membrane protein assembly complex subunit YfgL [Escherichia
coli CUMT8]
gi|390781015|gb|EIO48704.1| outer membrane assembly lipoprotein YfgL [Escherichia coli TW06591]
gi|391281282|gb|EIQ39934.1| outer membrane assembly lipoprotein YfgL [Shigella sonnei 3226-85]
gi|391283875|gb|EIQ42484.1| outer membrane assembly lipoprotein YfgL [Shigella sonnei 3233-85]
gi|391293597|gb|EIQ51856.1| outer membrane assembly lipoprotein YfgL [Shigella sonnei 4822-66]
gi|397899125|gb|EJL15501.1| outer membrane assembly lipoprotein YfgL [Shigella sonnei str.
Moseley]
gi|404290616|gb|EJZ47523.1| lipoprotein yfgL [Escherichia sp. 1_1_43]
gi|408163439|gb|EKH91305.1| outer membrane assembly lipoprotein YfgL [Escherichia coli 5905]
gi|408179702|gb|EKI06356.1| outer membrane assembly lipoprotein YfgL [Escherichia coli EC96038]
gi|408182461|gb|EKI08967.1| outer membrane assembly lipoprotein YfgL [Escherichia coli 5412]
gi|408192939|gb|EKI18498.1| outer membrane assembly lipoprotein YfgL [Escherichia coli TW15901]
gi|408201384|gb|EKI26539.1| outer membrane assembly lipoprotein YfgL [Escherichia coli TW00353]
gi|408460428|gb|EKJ84207.1| outer membrane assembly lipoprotein YfgL [Escherichia coli AD30]
gi|408567701|gb|EKK43755.1| outer membrane assembly lipoprotein YfgL [Escherichia coli 8.0566]
gi|408568504|gb|EKK44535.1| outer membrane assembly lipoprotein YfgL [Escherichia coli 8.0569]
gi|408590981|gb|EKK65433.1| outer membrane assembly lipoprotein YfgL [Escherichia coli 10.0869]
gi|430874835|gb|ELB98387.1| lipoprotein yfgL [Escherichia coli KTE2]
gi|430884539|gb|ELC07478.1| lipoprotein yfgL [Escherichia coli KTE10]
gi|430925248|gb|ELC45921.1| lipoprotein yfgL [Escherichia coli KTE26]
gi|430954742|gb|ELC73597.1| lipoprotein yfgL [Escherichia coli KTE181]
gi|430979136|gb|ELC95922.1| lipoprotein yfgL [Escherichia coli KTE193]
gi|430988330|gb|ELD04824.1| lipoprotein yfgL [Escherichia coli KTE204]
gi|431004551|gb|ELD19765.1| lipoprotein yfgL [Escherichia coli KTE208]
gi|431019732|gb|ELD33126.1| lipoprotein yfgL [Escherichia coli KTE213]
gi|431050405|gb|ELD60155.1| lipoprotein yfgL [Escherichia coli KTE228]
gi|431059588|gb|ELD68941.1| lipoprotein yfgL [Escherichia coli KTE234]
gi|431068614|gb|ELD77088.1| lipoprotein yfgL [Escherichia coli KTE235]
gi|431073847|gb|ELD81485.1| lipoprotein yfgL [Escherichia coli KTE236]
gi|431079220|gb|ELD86190.1| lipoprotein yfgL [Escherichia coli KTE237]
gi|431092773|gb|ELD98454.1| lipoprotein yfgL [Escherichia coli KTE51]
gi|431114449|gb|ELE17991.1| lipoprotein yfgL [Escherichia coli KTE56]
gi|431141717|gb|ELE43482.1| lipoprotein yfgL [Escherichia coli KTE66]
gi|431158403|gb|ELE59002.1| lipoprotein yfgL [Escherichia coli KTE76]
gi|431162747|gb|ELE63188.1| lipoprotein yfgL [Escherichia coli KTE77]
gi|431169851|gb|ELE70066.1| lipoprotein yfgL [Escherichia coli KTE80]
gi|431170494|gb|ELE70687.1| lipoprotein yfgL [Escherichia coli KTE81]
gi|431181252|gb|ELE81123.1| lipoprotein yfgL [Escherichia coli KTE83]
gi|431198682|gb|ELE97465.1| lipoprotein yfgL [Escherichia coli KTE111]
gi|431199764|gb|ELE98491.1| lipoprotein yfgL [Escherichia coli KTE116]
gi|431209899|gb|ELF07966.1| lipoprotein yfgL [Escherichia coli KTE119]
gi|431221058|gb|ELF18380.1| lipoprotein yfgL [Escherichia coli KTE156]
gi|431226390|gb|ELF23555.1| lipoprotein yfgL [Escherichia coli KTE161]
gi|431242172|gb|ELF36593.1| lipoprotein yfgL [Escherichia coli KTE171]
gi|431261853|gb|ELF53876.1| lipoprotein yfgL [Escherichia coli KTE9]
gi|431281792|gb|ELF72691.1| lipoprotein yfgL [Escherichia coli KTE42]
gi|431313930|gb|ELG01885.1| lipoprotein yfgL [Escherichia coli KTE50]
gi|431317596|gb|ELG05374.1| lipoprotein yfgL [Escherichia coli KTE54]
gi|431339366|gb|ELG26428.1| lipoprotein yfgL [Escherichia coli KTE78]
gi|431342770|gb|ELG29741.1| lipoprotein yfgL [Escherichia coli KTE79]
gi|431363654|gb|ELG50207.1| lipoprotein yfgL [Escherichia coli KTE115]
gi|431388338|gb|ELG72074.1| lipoprotein yfgL [Escherichia coli KTE140]
gi|431410434|gb|ELG93596.1| lipoprotein yfgL [Escherichia coli KTE147]
gi|431415838|gb|ELG98333.1| lipoprotein yfgL [Escherichia coli KTE158]
gi|431419779|gb|ELH02119.1| lipoprotein yfgL [Escherichia coli KTE154]
gi|431438994|gb|ELH20363.1| lipoprotein yfgL [Escherichia coli KTE190]
gi|431458337|gb|ELH38674.1| lipoprotein yfgL [Escherichia coli KTE196]
gi|431466917|gb|ELH46933.1| lipoprotein yfgL [Escherichia coli KTE197]
gi|431470007|gb|ELH49931.1| lipoprotein yfgL [Escherichia coli KTE203]
gi|431472651|gb|ELH52538.1| lipoprotein yfgL [Escherichia coli KTE202]
gi|431529883|gb|ELI06574.1| lipoprotein yfgL [Escherichia coli KTE105]
gi|431549730|gb|ELI23806.1| lipoprotein yfgL [Escherichia coli KTE112]
gi|431555370|gb|ELI29212.1| lipoprotein yfgL [Escherichia coli KTE117]
gi|431563705|gb|ELI36903.1| lipoprotein yfgL [Escherichia coli KTE120]
gi|431569585|gb|ELI42527.1| lipoprotein yfgL [Escherichia coli KTE122]
gi|431580738|gb|ELI53295.1| lipoprotein yfgL [Escherichia coli KTE125]
gi|431582685|gb|ELI54697.1| lipoprotein yfgL [Escherichia coli KTE128]
gi|431677049|gb|ELJ43131.1| lipoprotein yfgL [Escherichia coli KTE177]
gi|431700230|gb|ELJ65212.1| lipoprotein yfgL [Escherichia coli KTE82]
gi|431720128|gb|ELJ84162.1| lipoprotein yfgL [Escherichia coli KTE95]
gi|441607800|emb|CCP95951.1| Outer membrane protein YfgL, lipoprotein component of the protein
assembly complex (forms a complex with YaeT, YfiO, and
NlpB) [Escherichia coli O10:K5(L):H4 str. ATCC 23506]
gi|441652213|emb|CCQ02275.1| Outer membrane protein YfgL, lipoprotein component of the protein
assembly complex (forms a complex with YaeT, YfiO, and
NlpB) [Escherichia coli O5:K4(L):H4 str. ATCC 23502]
gi|444623675|gb|ELV97592.1| outer membrane assembly lipoprotein YfgL [Escherichia coli PA48]
Length = 392
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 95/226 (42%), Gaps = 24/226 (10%)
Query: 44 PAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG--------------LSGTGIVV 89
PA+A+ VVY G + A+NA +G IW +L++ G +SG + +
Sbjct: 65 PALADNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVSGGHVYI 124
Query: 90 NVTVAVVVAVSRSNGELVWSTQIDPRPRSQITMS-GSVYMGAFYVGLSSLEEALPADQCC 148
A V A++ S+G + W T++ S+ +S G V + L +L EA A +
Sbjct: 125 GSEKAQVYALNTSDGTVAWQTKVAGEALSRPVVSDGLVLIHTSNGQLQALNEADGAVK-W 183
Query: 149 TFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYS------GAAVWGS--SPAIDVIRRQK 200
T + L +R + GG G S G +W S A +
Sbjct: 184 TVNLDMPSLSLRGESAPATAFGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDR 243
Query: 201 QNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIF 246
++ T P + + + Y ++ ALD+ SG+I W + LG + F
Sbjct: 244 LSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQIMWKRELGSVNDF 289
Score = 42.0 bits (97), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 63/157 (40%), Gaps = 34/157 (21%)
Query: 32 WSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLS----KLTGLSGTGI 87
W + + P V++G+V + NG L A+N +GA+ W NL L G S
Sbjct: 143 WQTKVAGEALSRPVVSDGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPAT 202
Query: 88 VVNVTVA-----VVVAVSRSNGELVW---------STQIDPRPRSQITMSGSVYMGAFYV 133
V V AV G+++W ST+ID S + + V G +
Sbjct: 203 AFGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEID--RLSDVDTTPVVVNGVVF- 259
Query: 134 GLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYM 170
+ G+L LD+R+G+I+W+ +
Sbjct: 260 -------------ALAYNGNLTALDLRSGQIMWKREL 283
Score = 38.9 bits (89), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 61/131 (46%), Gaps = 19/131 (14%)
Query: 39 DISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG--LSGTGIVVNVTVAVV 96
D+ TP V NGVV+ ++NG L A++ +G ++W++ L + + G I + V
Sbjct: 246 DVDTTPVVVNGVVFALAYNGNLTALDLRSGQIMWKRELGSVNDFIVDGNRIYLVDQNDRV 305
Query: 97 VAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAK 156
+A++ G +W TQ D R + S +Y G VG S G L
Sbjct: 306 MALTIDGGVTLW-TQSDLLHR--LLTSPVLYNGNLVVGDS--------------EGYLHW 348
Query: 157 LDVRNGRIIWQ 167
++V +GR + Q
Sbjct: 349 INVEDGRFVAQ 359
>gi|293410926|ref|ZP_06654502.1| outer membrane assembly lipoprotein YfgL [Escherichia coli B354]
gi|291471394|gb|EFF13878.1| outer membrane assembly lipoprotein YfgL [Escherichia coli B354]
Length = 392
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 95/226 (42%), Gaps = 24/226 (10%)
Query: 44 PAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG--------------LSGTGIVV 89
PA+A+ VVY G + A+NA +G IW +L++ G +SG + +
Sbjct: 65 PALADNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVSGGHVYI 124
Query: 90 NVTVAVVVAVSRSNGELVWSTQIDPRPRSQITMS-GSVYMGAFYVGLSSLEEALPADQCC 148
A V A++ S+G + W T++ S+ +S G V + L +L EA A +
Sbjct: 125 GSEKAQVYALNTSDGTVAWQTKVAGEALSRPVVSDGLVLIHTSNGQLQALNEADGAVK-W 183
Query: 149 TFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYS------GAAVWGS--SPAIDVIRRQK 200
T + L +R + GG G S G +W S A +
Sbjct: 184 TVNLDMPSLSLRGESAPATAFGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDR 243
Query: 201 QNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIF 246
++ T P + + + Y ++ ALD+ SG+I W + LG + F
Sbjct: 244 LSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQIMWKRELGSVNDF 289
Score = 42.0 bits (97), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 63/157 (40%), Gaps = 34/157 (21%)
Query: 32 WSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLS----KLTGLSGTGI 87
W + + P V++G+V + NG L A+N +GA+ W NL L G S
Sbjct: 143 WQTKVAGEALSRPVVSDGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPAT 202
Query: 88 VVNVTVA-----VVVAVSRSNGELVW---------STQIDPRPRSQITMSGSVYMGAFYV 133
V V AV G+++W ST+ID S + + V G +
Sbjct: 203 AFGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEID--RLSDVDTTPVVVNGVVF- 259
Query: 134 GLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYM 170
+ G+L LD+R+G+I+W+ +
Sbjct: 260 -------------ALAYNGNLTALDLRSGQIMWKREL 283
Score = 38.9 bits (89), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 61/131 (46%), Gaps = 19/131 (14%)
Query: 39 DISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG--LSGTGIVVNVTVAVV 96
D+ TP V NGVV+ ++NG L A++ +G ++W++ L + + G I + V
Sbjct: 246 DVDTTPVVVNGVVFALAYNGNLTALDLRSGQIMWKRELGSVNDFIVDGNRIYLVDQNDRV 305
Query: 97 VAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAK 156
+A++ G +W TQ D R + S +Y G VG S G L
Sbjct: 306 MALTIDGGVTLW-TQSDLLHR--LLTSPVLYNGNLVVGDS--------------EGYLHW 348
Query: 157 LDVRNGRIIWQ 167
++V +GR + Q
Sbjct: 349 INVEDGRFVAQ 359
>gi|188493649|ref|ZP_03000919.1| outer membrane assembly lipoprotein YfgL [Escherichia coli 53638]
gi|188488848|gb|EDU63951.1| outer membrane assembly lipoprotein YfgL [Escherichia coli 53638]
Length = 392
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 94/226 (41%), Gaps = 24/226 (10%)
Query: 44 PAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG--------------LSGTGIVV 89
PA+A+ VVY G + A+NA +G IW +L++ G +SG + +
Sbjct: 65 PALADNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVSGGHVYI 124
Query: 90 NVTVAVVVAVSRSNGELVWSTQIDPRPRSQ-ITMSGSVYMGAFYVGLSSLEEALPADQCC 148
A V A++ S+G + W T++ S+ + G V + L +L EA A +
Sbjct: 125 GSEKAQVYALNTSDGTVAWQTKVAGEALSRPVVSDGLVLIHTSNGQLQALNEADGAVK-W 183
Query: 149 TFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYS------GAAVWGS--SPAIDVIRRQK 200
T + L +R + GG G S G +W S A +
Sbjct: 184 TVNLDMPSLSLRGESAPATAFGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDR 243
Query: 201 QNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIF 246
++ T P + + + Y ++ ALD+ SG+I W + LG + F
Sbjct: 244 LSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQIMWKRELGSVNDF 289
Score = 42.0 bits (97), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 63/157 (40%), Gaps = 34/157 (21%)
Query: 32 WSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLS----KLTGLSGTGI 87
W + + P V++G+V + NG L A+N +GA+ W NL L G S
Sbjct: 143 WQTKVAGEALSRPVVSDGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPAT 202
Query: 88 VVNVTVA-----VVVAVSRSNGELVW---------STQIDPRPRSQITMSGSVYMGAFYV 133
V V AV G+++W ST+ID S + + V G +
Sbjct: 203 AFGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEID--RLSDVDTTPVVVNGVVF- 259
Query: 134 GLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYM 170
+ G+L LD+R+G+I+W+ +
Sbjct: 260 -------------ALAYNGNLTALDLRSGQIMWKREL 283
Score = 37.7 bits (86), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 50/98 (51%), Gaps = 5/98 (5%)
Query: 39 DISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG--LSGTGIVVNVTVAVV 96
D+ TP V NGVV+ ++NG L A++ +G ++W++ L + + G I + V
Sbjct: 246 DVDTTPVVVNGVVFALAYNGNLTALDLRSGQIMWKRELGSVNDFIVDGNRIYLVDQNDRV 305
Query: 97 VAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVG 134
+A++ G +W TQ D R + S +Y G VG
Sbjct: 306 MALTIDGGVTLW-TQSDLLHR--LLTSPVLYNGNLVVG 340
>gi|124266787|ref|YP_001020791.1| glucose dehydrogenase [Methylibium petroleiphilum PM1]
gi|124259562|gb|ABM94556.1| glucose dehydrogenase [Methylibium petroleiphilum PM1]
Length = 651
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 42/90 (46%), Gaps = 18/90 (20%)
Query: 219 IYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTIS 278
++ S+VAL+ +G+IAW Y I + D D AP L+ ++
Sbjct: 300 LFGESLVALNAKTGKIAWY-----YQIVHHGIW-------------DYDLPAAPNLMDLT 341
Query: 279 TNGRFRDVVVAVQKSGFAWAFDRDSGDIIW 308
+GR V V K GF +AFDR +G IW
Sbjct: 342 VDGRKIKAAVQVTKQGFVFAFDRVNGKPIW 371
>gi|24113841|ref|NP_708351.1| outer membrane biogenesis protein BamB [Shigella flexneri 2a str.
301]
gi|30063904|ref|NP_838075.1| outer membrane protein assembly complex subunit YfgL [Shigella
flexneri 2a str. 2457T]
gi|82544961|ref|YP_408908.1| outer membrane protein assembly complex subunit YfgL [Shigella
boydii Sb227]
gi|191167678|ref|ZP_03029487.1| outer membrane assembly lipoprotein YfgL [Escherichia coli B7A]
gi|193064036|ref|ZP_03045121.1| outer membrane assembly lipoprotein YfgL [Escherichia coli E22]
gi|193068371|ref|ZP_03049334.1| outer membrane assembly lipoprotein YfgL [Escherichia coli E110019]
gi|209919989|ref|YP_002294073.1| outer membrane protein assembly complex subunit YfgL [Escherichia
coli SE11]
gi|260845142|ref|YP_003222920.1| protein assembly complex, lipoprotein component [Escherichia coli
O103:H2 str. 12009]
gi|293446865|ref|ZP_06663287.1| outer membrane assembly lipoprotein YfgL [Escherichia coli B088]
gi|300927125|ref|ZP_07142873.1| outer membrane assembly lipoprotein YfgL [Escherichia coli MS
182-1]
gi|301330397|ref|ZP_07223039.1| outer membrane assembly lipoprotein YfgL [Escherichia coli MS 78-1]
gi|307312493|ref|ZP_07592126.1| outer membrane assembly lipoprotein YfgL [Escherichia coli W]
gi|309794441|ref|ZP_07688864.1| outer membrane assembly lipoprotein YfgL [Escherichia coli MS
145-7]
gi|331669258|ref|ZP_08370106.1| outer membrane assembly lipoprotein YfgL [Escherichia coli TA271]
gi|378712027|ref|YP_005276920.1| outer membrane assembly lipoprotein YfgL [Escherichia coli KO11FL]
gi|384544128|ref|YP_005728191.1| putative dehydrogenase [Shigella flexneri 2002017]
gi|386609914|ref|YP_006125400.1| protein assembly complex, lipoprotein component [Escherichia coli
W]
gi|386700542|ref|YP_006164379.1| outer membrane biogenesis protein BamB [Escherichia coli KO11FL]
gi|386710402|ref|YP_006174123.1| outer membrane biogenesis protein BamB [Escherichia coli W]
gi|415853752|ref|ZP_11529682.1| outer membrane assembly lipoprotein YfgL [Shigella flexneri 2a str.
2457T]
gi|417122235|ref|ZP_11971493.1| outer membrane assembly lipoprotein YfgL [Escherichia coli 97.0246]
gi|417163668|ref|ZP_11998856.1| outer membrane assembly lipoprotein YfgL [Escherichia coli 99.0741]
gi|417173985|ref|ZP_12003781.1| outer membrane assembly lipoprotein YfgL [Escherichia coli 3.2608]
gi|417185026|ref|ZP_12010522.1| outer membrane assembly lipoprotein YfgL [Escherichia coli 93.0624]
gi|417220968|ref|ZP_12024408.1| outer membrane assembly lipoprotein YfgL [Escherichia coli 96.154]
gi|417251658|ref|ZP_12043423.1| outer membrane assembly lipoprotein YfgL [Escherichia coli 4.0967]
gi|417268758|ref|ZP_12056118.1| outer membrane assembly lipoprotein YfgL [Escherichia coli 3.3884]
gi|417597818|ref|ZP_12248454.1| outer membrane assembly lipoprotein YfgL [Escherichia coli 3030-1]
gi|417603166|ref|ZP_12253736.1| outer membrane assembly lipoprotein YfgL [Escherichia coli
STEC_94C]
gi|417609137|ref|ZP_12259640.1| outer membrane assembly lipoprotein YfgL [Escherichia coli
STEC_DG131-3]
gi|417624467|ref|ZP_12274766.1| outer membrane assembly lipoprotein YfgL [Escherichia coli
STEC_H.1.8]
gi|417640265|ref|ZP_12290406.1| outer membrane assembly lipoprotein YfgL [Escherichia coli TX1999]
gi|417702911|ref|ZP_12352022.1| outer membrane assembly lipoprotein YfgL [Shigella flexneri K-218]
gi|417713565|ref|ZP_12362530.1| outer membrane assembly lipoprotein YfgL [Shigella flexneri K-272]
gi|417724188|ref|ZP_12372992.1| outer membrane assembly lipoprotein YfgL [Shigella flexneri K-304]
gi|417729437|ref|ZP_12378135.1| outer membrane assembly lipoprotein YfgL [Shigella flexneri K-671]
gi|417734548|ref|ZP_12383199.1| outer membrane assembly lipoprotein YfgL [Shigella flexneri
2747-71]
gi|417739383|ref|ZP_12387962.1| outer membrane assembly lipoprotein YfgL [Shigella flexneri
4343-70]
gi|417744404|ref|ZP_12392930.1| outer membrane assembly lipoprotein YfgL [Shigella flexneri
2930-71]
gi|417828923|ref|ZP_12475474.1| outer membrane assembly lipoprotein YfgL [Shigella flexneri J1713]
gi|418257517|ref|ZP_12881185.1| outer membrane assembly lipoprotein YfgL [Shigella flexneri
6603-63]
gi|419171181|ref|ZP_13715067.1| outer membrane assembly lipoprotein YfgL [Escherichia coli DEC7A]
gi|419181812|ref|ZP_13725425.1| outer membrane assembly lipoprotein YfgL [Escherichia coli DEC7C]
gi|419187259|ref|ZP_13730773.1| outer membrane assembly lipoprotein YfgL [Escherichia coli DEC7D]
gi|419192558|ref|ZP_13736010.1| outer membrane assembly lipoprotein YfgL [Escherichia coli DEC7E]
gi|419290440|ref|ZP_13832532.1| outer membrane assembly lipoprotein YfgL [Escherichia coli DEC11A]
gi|419295834|ref|ZP_13837877.1| outer membrane assembly lipoprotein YfgL [Escherichia coli DEC11B]
gi|419301229|ref|ZP_13843228.1| outer membrane assembly lipoprotein YfgL [Escherichia coli DEC11C]
gi|419370996|ref|ZP_13912115.1| outer membrane assembly lipoprotein YfgL [Escherichia coli DEC14A]
gi|419392630|ref|ZP_13933437.1| outer membrane assembly lipoprotein YfgL [Escherichia coli DEC15A]
gi|419397615|ref|ZP_13938383.1| outer membrane assembly lipoprotein YfgL [Escherichia coli DEC15B]
gi|419402957|ref|ZP_13943681.1| outer membrane assembly lipoprotein YfgL [Escherichia coli DEC15C]
gi|419408076|ref|ZP_13948765.1| outer membrane assembly lipoprotein YfgL [Escherichia coli DEC15D]
gi|419868345|ref|ZP_14390626.1| outer membrane biogenesis protein BamB [Escherichia coli O103:H2
str. CVM9450]
gi|419931188|ref|ZP_14448776.1| outer membrane protein assembly complex subunit YfgL [Escherichia
coli 541-1]
gi|420321402|ref|ZP_14823230.1| outer membrane assembly lipoprotein YfgL [Shigella flexneri
2850-71]
gi|420342838|ref|ZP_14844311.1| outer membrane assembly lipoprotein YfgL [Shigella flexneri K-404]
gi|420386565|ref|ZP_14885914.1| outer membrane assembly lipoprotein YfgL [Escherichia coli EPECa12]
gi|422351894|ref|ZP_16432699.1| outer membrane assembly lipoprotein YfgL [Escherichia coli MS
117-3]
gi|422777771|ref|ZP_16831423.1| outer membrane assembly lipoprotein YfgL [Escherichia coli H120]
gi|422956109|ref|ZP_16968583.1| lipoprotein yfgL [Escherichia coli H494]
gi|423706632|ref|ZP_17681015.1| lipoprotein yfgL [Escherichia coli B799]
gi|425423356|ref|ZP_18804524.1| outer membrane assembly lipoprotein YfgL [Escherichia coli 0.1288]
gi|427805693|ref|ZP_18972760.1| putative dehydrogenase [Escherichia coli chi7122]
gi|427810189|ref|ZP_18977254.1| putative dehydrogenase [Escherichia coli]
gi|432377722|ref|ZP_19620711.1| lipoprotein yfgL [Escherichia coli KTE12]
gi|432675636|ref|ZP_19911092.1| lipoprotein yfgL [Escherichia coli KTE142]
gi|432750961|ref|ZP_19985563.1| lipoprotein yfgL [Escherichia coli KTE29]
gi|432832569|ref|ZP_20066141.1| lipoprotein yfgL [Escherichia coli KTE135]
gi|432835466|ref|ZP_20069004.1| lipoprotein yfgL [Escherichia coli KTE136]
gi|433092886|ref|ZP_20279150.1| lipoprotein yfgL [Escherichia coli KTE138]
gi|433131054|ref|ZP_20316489.1| lipoprotein yfgL [Escherichia coli KTE163]
gi|443618567|ref|YP_007382423.1| outer membrane biogenesis protein BamB [Escherichia coli APEC O78]
gi|450219664|ref|ZP_21896206.1| outer membrane biogenesis protein BamB [Escherichia coli O08]
gi|24052932|gb|AAN44058.1| putative dehydrogenase [Shigella flexneri 2a str. 301]
gi|30042159|gb|AAP17885.1| putative dehydrogenase [Shigella flexneri 2a str. 2457T]
gi|81246372|gb|ABB67080.1| putative dehydrogenase [Shigella boydii Sb227]
gi|190902277|gb|EDV62017.1| outer membrane assembly lipoprotein YfgL [Escherichia coli B7A]
gi|192929271|gb|EDV82880.1| outer membrane assembly lipoprotein YfgL [Escherichia coli E22]
gi|192958323|gb|EDV88763.1| outer membrane assembly lipoprotein YfgL [Escherichia coli E110019]
gi|209913248|dbj|BAG78322.1| putative dehydrogenase [Escherichia coli SE11]
gi|257760289|dbj|BAI31786.1| protein assembly complex, lipoprotein component [Escherichia coli
O103:H2 str. 12009]
gi|281601914|gb|ADA74898.1| putative dehydrogenase [Shigella flexneri 2002017]
gi|291323695|gb|EFE63123.1| outer membrane assembly lipoprotein YfgL [Escherichia coli B088]
gi|300416895|gb|EFK00206.1| outer membrane assembly lipoprotein YfgL [Escherichia coli MS
182-1]
gi|300843626|gb|EFK71386.1| outer membrane assembly lipoprotein YfgL [Escherichia coli MS 78-1]
gi|306907416|gb|EFN37920.1| outer membrane assembly lipoprotein YfgL [Escherichia coli W]
gi|308121897|gb|EFO59159.1| outer membrane assembly lipoprotein YfgL [Escherichia coli MS
145-7]
gi|313650998|gb|EFS15398.1| outer membrane assembly lipoprotein YfgL [Shigella flexneri 2a str.
2457T]
gi|315061831|gb|ADT76158.1| protein assembly complex, lipoprotein component [Escherichia coli
W]
gi|323377588|gb|ADX49856.1| outer membrane assembly lipoprotein YfgL [Escherichia coli KO11FL]
gi|323944734|gb|EGB40801.1| outer membrane assembly lipoprotein YfgL [Escherichia coli H120]
gi|324020072|gb|EGB89291.1| outer membrane assembly lipoprotein YfgL [Escherichia coli MS
117-3]
gi|331064452|gb|EGI36363.1| outer membrane assembly lipoprotein YfgL [Escherichia coli TA271]
gi|332754199|gb|EGJ84567.1| outer membrane assembly lipoprotein YfgL [Shigella flexneri
4343-70]
gi|332755562|gb|EGJ85926.1| outer membrane assembly lipoprotein YfgL [Shigella flexneri K-671]
gi|332756622|gb|EGJ86973.1| outer membrane assembly lipoprotein YfgL [Shigella flexneri
2747-71]
gi|332766345|gb|EGJ96555.1| outer membrane assembly lipoprotein YfgL [Shigella flexneri
2930-71]
gi|333001771|gb|EGK21337.1| outer membrane assembly lipoprotein YfgL [Shigella flexneri K-218]
gi|333002307|gb|EGK21871.1| outer membrane assembly lipoprotein YfgL [Shigella flexneri K-272]
gi|333016483|gb|EGK35814.1| outer membrane assembly lipoprotein YfgL [Shigella flexneri K-304]
gi|335574778|gb|EGM61096.1| outer membrane assembly lipoprotein YfgL [Shigella flexneri J1713]
gi|345350832|gb|EGW83107.1| outer membrane assembly lipoprotein YfgL [Escherichia coli
STEC_94C]
gi|345352615|gb|EGW84861.1| outer membrane assembly lipoprotein YfgL [Escherichia coli 3030-1]
gi|345358346|gb|EGW90534.1| outer membrane assembly lipoprotein YfgL [Escherichia coli
STEC_DG131-3]
gi|345377428|gb|EGX09360.1| outer membrane assembly lipoprotein YfgL [Escherichia coli
STEC_H.1.8]
gi|345393267|gb|EGX23045.1| outer membrane assembly lipoprotein YfgL [Escherichia coli TX1999]
gi|371600407|gb|EHN89181.1| lipoprotein yfgL [Escherichia coli H494]
gi|378015225|gb|EHV78122.1| outer membrane assembly lipoprotein YfgL [Escherichia coli DEC7A]
gi|378023445|gb|EHV86122.1| outer membrane assembly lipoprotein YfgL [Escherichia coli DEC7C]
gi|378029251|gb|EHV91867.1| outer membrane assembly lipoprotein YfgL [Escherichia coli DEC7D]
gi|378037911|gb|EHW00433.1| outer membrane assembly lipoprotein YfgL [Escherichia coli DEC7E]
gi|378130241|gb|EHW91611.1| outer membrane assembly lipoprotein YfgL [Escherichia coli DEC11A]
gi|378140559|gb|EHX01782.1| outer membrane assembly lipoprotein YfgL [Escherichia coli DEC11B]
gi|378150845|gb|EHX11960.1| outer membrane assembly lipoprotein YfgL [Escherichia coli DEC11C]
gi|378217590|gb|EHX77869.1| outer membrane assembly lipoprotein YfgL [Escherichia coli DEC14A]
gi|378236824|gb|EHX96863.1| outer membrane assembly lipoprotein YfgL [Escherichia coli DEC15A]
gi|378243736|gb|EHY03682.1| outer membrane assembly lipoprotein YfgL [Escherichia coli DEC15B]
gi|378247491|gb|EHY07410.1| outer membrane assembly lipoprotein YfgL [Escherichia coli DEC15C]
gi|378254455|gb|EHY14319.1| outer membrane assembly lipoprotein YfgL [Escherichia coli DEC15D]
gi|383392069|gb|AFH17027.1| outer membrane biogenesis protein BamB [Escherichia coli KO11FL]
gi|383406094|gb|AFH12337.1| outer membrane biogenesis protein BamB [Escherichia coli W]
gi|385711597|gb|EIG48555.1| lipoprotein yfgL [Escherichia coli B799]
gi|386147515|gb|EIG93955.1| outer membrane assembly lipoprotein YfgL [Escherichia coli 97.0246]
gi|386172893|gb|EIH44907.1| outer membrane assembly lipoprotein YfgL [Escherichia coli 99.0741]
gi|386176677|gb|EIH54156.1| outer membrane assembly lipoprotein YfgL [Escherichia coli 3.2608]
gi|386183088|gb|EIH65839.1| outer membrane assembly lipoprotein YfgL [Escherichia coli 93.0624]
gi|386200770|gb|EIH99760.1| outer membrane assembly lipoprotein YfgL [Escherichia coli 96.154]
gi|386218507|gb|EII34990.1| outer membrane assembly lipoprotein YfgL [Escherichia coli 4.0967]
gi|386227563|gb|EII54919.1| outer membrane assembly lipoprotein YfgL [Escherichia coli 3.3884]
gi|388344971|gb|EIL10767.1| outer membrane biogenesis protein BamB [Escherichia coli O103:H2
str. CVM9450]
gi|388398923|gb|EIL59734.1| outer membrane protein assembly complex subunit YfgL [Escherichia
coli 541-1]
gi|391247473|gb|EIQ06722.1| outer membrane assembly lipoprotein YfgL [Shigella flexneri
2850-71]
gi|391265911|gb|EIQ24878.1| outer membrane assembly lipoprotein YfgL [Shigella flexneri K-404]
gi|391304852|gb|EIQ62654.1| outer membrane assembly lipoprotein YfgL [Escherichia coli EPECa12]
gi|397897139|gb|EJL13550.1| outer membrane assembly lipoprotein YfgL [Shigella flexneri
6603-63]
gi|408343248|gb|EKJ57652.1| outer membrane assembly lipoprotein YfgL [Escherichia coli 0.1288]
gi|412963875|emb|CCK47801.1| putative dehydrogenase [Escherichia coli chi7122]
gi|412970368|emb|CCJ45014.1| putative dehydrogenase [Escherichia coli]
gi|430897742|gb|ELC19936.1| lipoprotein yfgL [Escherichia coli KTE12]
gi|431213443|gb|ELF11317.1| lipoprotein yfgL [Escherichia coli KTE142]
gi|431295979|gb|ELF85709.1| lipoprotein yfgL [Escherichia coli KTE29]
gi|431374847|gb|ELG60192.1| lipoprotein yfgL [Escherichia coli KTE135]
gi|431384630|gb|ELG68676.1| lipoprotein yfgL [Escherichia coli KTE136]
gi|431609569|gb|ELI78886.1| lipoprotein yfgL [Escherichia coli KTE138]
gi|431645851|gb|ELJ13395.1| lipoprotein yfgL [Escherichia coli KTE163]
gi|443423075|gb|AGC87979.1| outer membrane biogenesis protein BamB [Escherichia coli APEC O78]
gi|449316969|gb|EMD07065.1| outer membrane biogenesis protein BamB [Escherichia coli O08]
Length = 392
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 95/226 (42%), Gaps = 24/226 (10%)
Query: 44 PAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG--------------LSGTGIVV 89
PA+A+ VVY G + A+NA +G IW +L++ G +SG + +
Sbjct: 65 PALADNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVSGGHVYI 124
Query: 90 NVTVAVVVAVSRSNGELVWSTQIDPRPRSQITMS-GSVYMGAFYVGLSSLEEALPADQCC 148
A V A++ S+G + W T++ S+ +S G V + L +L EA A +
Sbjct: 125 GSEKAQVYALNTSDGTVAWQTKVAGEALSRPVVSDGLVLIHTSNGQLQALNEADGAVK-W 183
Query: 149 TFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYS------GAAVWGS--SPAIDVIRRQK 200
T + L +R + GG G S G +W S A +
Sbjct: 184 TVNLDMPSLSLRGESAPATAFGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDR 243
Query: 201 QNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIF 246
++ T P + + + Y ++ ALD+ SG+I W + LG + F
Sbjct: 244 LSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQIMWKRELGSVNDF 289
Score = 42.0 bits (97), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 63/157 (40%), Gaps = 34/157 (21%)
Query: 32 WSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLS----KLTGLSGTGI 87
W + + P V++G+V + NG L A+N +GA+ W NL L G S
Sbjct: 143 WQTKVAGEALSRPVVSDGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPAT 202
Query: 88 VVNVTVA-----VVVAVSRSNGELVW---------STQIDPRPRSQITMSGSVYMGAFYV 133
V V AV G+++W ST+ID S + + V G +
Sbjct: 203 AFGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEID--RLSDVDTTPVVVNGVVF- 259
Query: 134 GLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYM 170
+ G+L LD+R+G+I+W+ +
Sbjct: 260 -------------ALAYNGNLTALDLRSGQIMWKREL 283
>gi|405374852|ref|ZP_11029146.1| PQQ enzyme repeat domain protein [Chondromyces apiculatus DSM 436]
gi|397086520|gb|EJJ17623.1| PQQ enzyme repeat domain protein [Myxococcus sp. (contaminant ex
DSM 436)]
Length = 387
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 90/222 (40%), Gaps = 47/222 (21%)
Query: 29 RLRWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWE----QNLSKLTGLSG 84
+++W + SA P V +G+VY P +G LYA++A G W+ + L+ + +S
Sbjct: 97 KVKWLYKTASRFSAGPRVVDGIVYVPGGDGVLYALDAATGDEKWKYVAGEALATVPVVSE 156
Query: 85 TGIVVNVTVAVVVAVSRSNGELVWSTQIDPRPRSQITMSGS----VYMGAFYVGLSSLEE 140
++V + AV ++G+ W + D P + T+ G+ V G Y+G S
Sbjct: 157 GLVLVASESDTLFAVKVTDGQWAWQYRRD--PPTGFTVRGASRPLVREGVAYIGFSD--- 211
Query: 141 ALPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYSGAAVWGSSPAIDVIRRQK 200
G + L +G + W+ + G S SSP +D
Sbjct: 212 -----------GYIVALSADDGGVTWERSL-------SGSGSEFLDVDSSPVMDA----- 248
Query: 201 QNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGG 242
N Q + Y + I AL+ DSG + W+ + G
Sbjct: 249 -NGQ----------LYVTSYKSGIFALEADSGDVVWSTSVPG 279
>gi|386828671|ref|ZP_10115778.1| PQQ-dependent dehydrogenase, methanol/ethanol family [Beggiatoa
alba B18LD]
gi|386429555|gb|EIJ43383.1| PQQ-dependent dehydrogenase, methanol/ethanol family [Beggiatoa
alba B18LD]
Length = 604
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 71/333 (21%), Positives = 121/333 (36%), Gaps = 78/333 (23%)
Query: 20 INPVTVRNLRLRWSFYAG----KDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQN 75
+N TV +L WSF G + A P + +G +Y + L+A++A G IWE
Sbjct: 68 VNKDTVADLVPAWSFSFGGEKQRGQQAQPLIFDGKIYVTASYSRLFAIDAATGQEIWEYE 127
Query: 76 -------------LSKLTGLSGTGIVVNVTVAVVVAVSRSNGELVWSTQI-DPRPRSQIT 121
+++ L I+ A +VA+ R G+ VW + D + T
Sbjct: 128 HRLPDGIMPCCDVINRGAALYDNLIIFGTLNAELVALDRETGKRVWKEVLGDYKAGYSFT 187
Query: 122 MSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIW-----QTYMLPDNGG 176
+ ++ G+S E + G + D + G+++W Q +M NG
Sbjct: 188 AAPTIVKNMVVTGISGGEFGV--------VGKVEARDAKTGKLVWSRPTVQGHMGYLNGK 239
Query: 177 KRG---------------GYSGAAVW---GSSPAIDVIRRQKQN----NQTTKPTHPDQC 214
+ G G A W P ++I N N T+P
Sbjct: 240 ENGITGGDLPMTWEGDMWKTGGGAPWLGGTYDPETNLIFYGTGNPSPWNAHTRP------ 293
Query: 215 ISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPML 274
+++ +S +ALD D+G I W FY T P D D +
Sbjct: 294 -GDNLFTSSTLALDADTGVIKW---------FYQTT---------PHDGWDYDGVNEFIP 334
Query: 275 LTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
+ +G+ ++GF + DR +G ++
Sbjct: 335 FDLEKDGKIIKAGAKADRNGFFYILDRTNGKLL 367
>gi|260575632|ref|ZP_05843629.1| PQQ-dependent dehydrogenase, methanol/ethanol family [Rhodobacter
sp. SW2]
gi|259022030|gb|EEW25329.1| PQQ-dependent dehydrogenase, methanol/ethanol family [Rhodobacter
sp. SW2]
Length = 600
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 76/357 (21%), Positives = 136/357 (38%), Gaps = 81/357 (22%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAG--KDISATPAVANGVVYFPS-WN 57
W+ GD N+RY+ + IN V +L++ W+F G + +P V ++Y S +
Sbjct: 35 WVIQTGDYANQRYSELD-QINTGNVADLQVAWTFSTGVLRGHEGSPLVVGDIMYVHSPFP 93
Query: 58 GYLYAVNAF-NGALIWE---------------QNLSKLTGLSGTGIVVNVTVAVVVAVSR 101
+YA++ NG +IW +++ + I ++ VVA+
Sbjct: 94 NKVYALDLNDNGKIIWRYEPVQDPTVIPVMCCDTVNRGVAYADGKIFLHQADTTVVALDA 153
Query: 102 SNGELVWSTQI-DPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVR 160
G +VWS + DP T + VG+S E + RGS+ ++
Sbjct: 154 LTGAVVWSVKNGDPTKGETNTATVMPVKDKLIVGISGGEFGV--------RGSVTAYNIA 205
Query: 161 NGRIIWQTYML---------------------PDNG-----GKRGGYSGAAVWG---SSP 191
+G + W+ Y + PD+G G + G WG P
Sbjct: 206 DGSLAWRGYSMGPDSDTLIDPVNTTHLGKPVGPDSGTNTWEGDQWKIGGGTTWGWYSYDP 265
Query: 192 AIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCL 251
+++I N T P+ Q + ++ +I A D D+G W + +D + F
Sbjct: 266 ELNLIYYGSGNPSTWNPS---QRPGDNRWSMTIWARDADTGVAKWVYQMTPHDEWDFD-- 320
Query: 252 VPNNPDCPPGPNLDADFGEAPMLLTIST-NGRFRDVVVAVQKSGFAWAFDRDSGDII 307
G M+LT G R ++ ++GF + DR +G+++
Sbjct: 321 -----------------GVNEMVLTEQQIGGVDRKLLTHFDRNGFGYTLDRVTGELL 360
>gi|435848241|ref|YP_007310491.1| hypothetical protein Natoc_2946 [Natronococcus occultus SP4]
gi|433674509|gb|AGB38701.1| hypothetical protein Natoc_2946 [Natronococcus occultus SP4]
Length = 598
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 52/112 (46%), Gaps = 8/112 (7%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAGKDISATPAVANGVVYFPSWNGYL 60
W +H G R E I+ L W+ +I AVA+GVVY NG +
Sbjct: 46 WPSHRGGAGQARDVANEPAIDAA---ELEADWAVDHHDEI----AVADGVVYASIDNGVV 98
Query: 61 YAVNAFNGALIWEQNLSKLTGLSGTGIVVNVTVAVVVAVSRSNGELVWSTQI 112
A++A +GAL+WE T S G V +T VVA+ RS+G + W T
Sbjct: 99 -ALDAADGALVWENPDVAATAPSVDGERVFLTGTEVVALDRSDGRVRWRTDF 149
>gi|432810181|ref|ZP_20044074.1| lipoprotein yfgL [Escherichia coli KTE101]
gi|431362949|gb|ELG49527.1| lipoprotein yfgL [Escherichia coli KTE101]
Length = 392
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 94/226 (41%), Gaps = 24/226 (10%)
Query: 44 PAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG--------------LSGTGIVV 89
PA+A+ VVY G + A+NA +G IW +L++ G +SG + +
Sbjct: 65 PALADNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVSGGHVYI 124
Query: 90 NVTVAVVVAVSRSNGELVWSTQIDPRPRSQ-ITMSGSVYMGAFYVGLSSLEEALPADQCC 148
A V A++ S+G + W T++ S+ + G V + L +L EA A +
Sbjct: 125 GSEKAQVYALNTSDGTVAWQTKVAGEALSRPVVSDGLVLIHTSNGQLQALNEADGAVK-W 183
Query: 149 TFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYS------GAAVWGS--SPAIDVIRRQK 200
T + L +R + GG G S G +W S A +
Sbjct: 184 TVNLDMPSLSLRGESAPATAFGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDR 243
Query: 201 QNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIF 246
++ T P + + + Y ++ ALD+ SG+I W + LG + F
Sbjct: 244 LSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQIMWKRELGSVNDF 289
Score = 42.0 bits (97), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 63/157 (40%), Gaps = 34/157 (21%)
Query: 32 WSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLS----KLTGLSGTGI 87
W + + P V++G+V + NG L A+N +GA+ W NL L G S
Sbjct: 143 WQTKVAGEALSRPVVSDGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPAT 202
Query: 88 VVNVTVA-----VVVAVSRSNGELVW---------STQIDPRPRSQITMSGSVYMGAFYV 133
V V AV G+++W ST+ID S + + V G +
Sbjct: 203 AFGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEID--RLSDVDTTPVVVNGVVF- 259
Query: 134 GLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYM 170
+ G+L LD+R+G+I+W+ +
Sbjct: 260 -------------ALAYNGNLTALDLRSGQIMWKREL 283
Score = 38.9 bits (89), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 61/131 (46%), Gaps = 19/131 (14%)
Query: 39 DISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG--LSGTGIVVNVTVAVV 96
D+ TP V NGVV+ ++NG L A++ +G ++W++ L + + G I + V
Sbjct: 246 DVDTTPVVVNGVVFALAYNGNLTALDLRSGQIMWKRELGSVNDFIVDGNRIYLVDQNDRV 305
Query: 97 VAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAK 156
+A++ G +W TQ D R + S +Y G VG S G L
Sbjct: 306 MALTIDGGVTLW-TQSDLLHR--LLTSPVLYNGNLVVGDS--------------EGYLHW 348
Query: 157 LDVRNGRIIWQ 167
++V +GR + Q
Sbjct: 349 INVEDGRFVAQ 359
>gi|332278335|ref|ZP_08390748.1| outer membrane protein assembly complex subunit YfgL [Shigella sp.
D9]
gi|332100687|gb|EGJ04033.1| outer membrane protein assembly complex subunit YfgL [Shigella sp.
D9]
Length = 392
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 94/226 (41%), Gaps = 24/226 (10%)
Query: 44 PAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG--------------LSGTGIVV 89
PA+A+ VVY G + A+NA +G IW +L++ G +SG + +
Sbjct: 65 PALADNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVSGGHVYI 124
Query: 90 NVTVAVVVAVSRSNGELVWSTQIDPRPRSQ-ITMSGSVYMGAFYVGLSSLEEALPADQCC 148
A V A++ S+G + W T++ S+ + G V + L +L EA A +
Sbjct: 125 GSEKAQVYALNTSDGTVAWQTKVAGEALSRPVVSDGLVLIHTSNGQLQALNEADGAVK-W 183
Query: 149 TFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYS------GAAVWGS--SPAIDVIRRQK 200
T + L +R + GG G S G +W S A +
Sbjct: 184 TVNLDMPSLSLRGESAPATAFGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDR 243
Query: 201 QNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIF 246
++ T P + + + Y ++ ALD+ SG+I W + LG + F
Sbjct: 244 LSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQIMWKRELGSVNDF 289
Score = 42.0 bits (97), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 63/157 (40%), Gaps = 34/157 (21%)
Query: 32 WSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLS----KLTGLSGTGI 87
W + + P V++G+V + NG L A+N +GA+ W NL L G S
Sbjct: 143 WQTKVAGEALSRPVVSDGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPAT 202
Query: 88 VVNVTVA-----VVVAVSRSNGELVW---------STQIDPRPRSQITMSGSVYMGAFYV 133
V V AV G+++W ST+ID S + + V G +
Sbjct: 203 AFGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEID--RLSDVDTTPVVVNGVVF- 259
Query: 134 GLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYM 170
+ G+L LD+R+G+I+W+ +
Sbjct: 260 -------------ALAYNGNLTALDLRSGQIMWKREL 283
>gi|419279045|ref|ZP_13821291.1| outer membrane assembly lipoprotein YfgL [Escherichia coli DEC10E]
gi|419376444|ref|ZP_13917468.1| outer membrane assembly lipoprotein YfgL [Escherichia coli DEC14B]
gi|419381781|ref|ZP_13922731.1| outer membrane assembly lipoprotein YfgL [Escherichia coli DEC14C]
gi|419387125|ref|ZP_13928003.1| outer membrane assembly lipoprotein YfgL [Escherichia coli DEC14D]
gi|378127746|gb|EHW89134.1| outer membrane assembly lipoprotein YfgL [Escherichia coli DEC10E]
gi|378219167|gb|EHX79436.1| outer membrane assembly lipoprotein YfgL [Escherichia coli DEC14B]
gi|378227424|gb|EHX87596.1| outer membrane assembly lipoprotein YfgL [Escherichia coli DEC14C]
gi|378231652|gb|EHX91763.1| outer membrane assembly lipoprotein YfgL [Escherichia coli DEC14D]
Length = 392
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 95/226 (42%), Gaps = 24/226 (10%)
Query: 44 PAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG--------------LSGTGIVV 89
PA+A+ VVY G + A+NA +G IW +L++ G +SG + +
Sbjct: 65 PALADNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVSGGHVYI 124
Query: 90 NVTVAVVVAVSRSNGELVWSTQIDPRPRSQITMS-GSVYMGAFYVGLSSLEEALPADQCC 148
A V A++ S+G + W T++ S+ +S G V + L +L EA A +
Sbjct: 125 GSEKAQVYALNTSDGTVAWQTKVAGEALSRPVVSDGLVLIHTSNGQLQALNEADGAVK-W 183
Query: 149 TFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYS------GAAVWGS--SPAIDVIRRQK 200
T + L +R + GG G S G +W S A +
Sbjct: 184 TVNLDMPSLSLRGESAPATAFGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDR 243
Query: 201 QNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIF 246
++ T P + + + Y ++ ALD+ SG+I W + LG + F
Sbjct: 244 LSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQIMWKRELGSVNDF 289
Score = 42.0 bits (97), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 63/157 (40%), Gaps = 34/157 (21%)
Query: 32 WSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLS----KLTGLSGTGI 87
W + + P V++G+V + NG L A+N +GA+ W NL L G S
Sbjct: 143 WQTKVAGEALSRPVVSDGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPAT 202
Query: 88 VVNVTVA-----VVVAVSRSNGELVW---------STQIDPRPRSQITMSGSVYMGAFYV 133
V V AV G+++W ST+ID S + + V G +
Sbjct: 203 AFGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEID--RLSDVDTTPVVVNGVVF- 259
Query: 134 GLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYM 170
+ G+L LD+R+G+I+W+ +
Sbjct: 260 -------------ALAYNGNLTALDLRSGQIMWKREL 283
>gi|312879931|ref|ZP_07739731.1| Pyrrolo-quinoline quinone [Aminomonas paucivorans DSM 12260]
gi|310783222|gb|EFQ23620.1| Pyrrolo-quinoline quinone [Aminomonas paucivorans DSM 12260]
Length = 368
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 32/43 (74%)
Query: 31 RWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWE 73
+W F AG+++ ++PAVA+GVVY + +G LYA++A G L+W
Sbjct: 175 KWKFKAGREVYSSPAVADGVVYVGNHDGKLYALDAQKGTLLWR 217
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 54/117 (46%), Gaps = 5/117 (4%)
Query: 30 LRWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWE----QNLSKLTGLSGT 85
L W G IS +PAVA+G++YF SW+G +YA + A++W ++ +SG
Sbjct: 214 LLWRAVVGGPISGSPAVADGMLYFGSWDGKVYAARVKHRAVVWRYAAGASVESSPVVSGG 273
Query: 86 GIVVNVTVAVVVAVSRSNGELVWSTQIDPR-PRSQITMSGSVYMGAFYVGLSSLEEA 141
+ V + + + G +W + P S +G VY G+ L L+ A
Sbjct: 274 KLYVGDMAGQLHCLDAATGNPLWVFKTHMGIPSSPAVAAGKVYFGSNDDALFCLDAA 330
Score = 40.0 bits (92), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 51/108 (47%), Gaps = 5/108 (4%)
Query: 29 RLRWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTGLS---GT 85
+L W F K++ ++PAVA+G+V+F +GY+Y V+ G W+ + S
Sbjct: 133 KLAWRFTTHKNVHSSPAVADGLVFFGGVDGYVYGVDLKKGWQKWKFKAGREVYSSPAVAD 192
Query: 86 GIV-VNVTVAVVVAVSRSNGELVWSTQI-DPRPRSQITMSGSVYMGAF 131
G+V V + A+ G L+W + P S G +Y G++
Sbjct: 193 GVVYVGNHDGKLYALDAQKGTLLWRAVVGGPISGSPAVADGMLYFGSW 240
Score = 38.9 bits (89), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 59/144 (40%), Gaps = 22/144 (15%)
Query: 29 RLRWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIW----EQNLSKLTGLSG 84
R+RW+F ++++P V+ G+V F S++ +YA++A G L W +N+ ++
Sbjct: 93 RVRWTFPTENWVASSPCVSGGLVIFGSYDSRVYALDAATGKLAWRFTTHKNVHSSPAVAD 152
Query: 85 TGIVVNVTVAVVVAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPA 144
+ V V G W + ++ S +V G YVG
Sbjct: 153 GLVFFGGVDGYVYGVDLKKGWQKWKFKAG----REVYSSPAVADGVVYVG---------- 198
Query: 145 DQCCTFRGSLAKLDVRNGRIIWQT 168
G L LD + G ++W+
Sbjct: 199 ----NHDGKLYALDAQKGTLLWRA 218
>gi|238921036|ref|YP_002934551.1| outer membrane assembly lipoprotein YfgL, putative [Edwardsiella
ictaluri 93-146]
gi|238870605|gb|ACR70316.1| outer membrane assembly lipoprotein YfgL, putative [Edwardsiella
ictaluri 93-146]
Length = 392
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 96/243 (39%), Gaps = 66/243 (27%)
Query: 44 PAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG--------------LSGTGIVV 89
PA + +Y G + A+NA NG +W NL + G +SG+ + V
Sbjct: 65 PAFQDNHIYAADRQGLVMAMNAENGDKLWSVNLGEKEGWFSRSDALLSGGLTVSGSKVYV 124
Query: 90 NVTVAVVVAVSRSNGELVWSTQIDPRPRSQITMS-GSVYMGAFYVGLSSLEEA------- 141
AVV A++ +G + W T + S+ +S G V + L +L+E+
Sbjct: 125 GSEHAVVYALNSDDGSIAWKTTVAGEAISRPVVSDGLVLIHTSNGMLQALDESDGTIKWT 184
Query: 142 ----LPADQCCTFRGS------------------LAKLDVRNGRIIWQTYMLPDNGGKRG 179
+P+ T RG ++ + ++ G++IWQ + NG
Sbjct: 185 ISLDIPS---LTLRGESAPAVAYGAAIVGGDNGRVSAVLLQQGQMIWQQRVAQPNG---- 237
Query: 180 GYSGAAVWGSSPAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKP 239
+ ID + N+ P D + + Y S+ ALD+ SG+I W +
Sbjct: 238 ----------ATEID-----RLNDIDMTPVVVDGVVYTLGYNGSLSALDLRSGQIVWKRD 282
Query: 240 LGG 242
+GG
Sbjct: 283 MGG 285
Score = 41.6 bits (96), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 67/153 (43%), Gaps = 35/153 (22%)
Query: 36 AGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLS----KLTGLSGTGIVVNV 91
AG+ IS P V++G+V + NG L A++ +G + W +L L G S +
Sbjct: 148 AGEAIS-RPVVSDGLVLIHTSNGMLQALDESDGTIKWTISLDIPSLTLRGESAPAVAYGA 206
Query: 92 TVA-----VVVAVSRSNGELVW---------STQIDPRPRSQITMSGSVYMGAFYVGLSS 137
+ V AV G+++W +T+ID + I M+ V G Y
Sbjct: 207 AIVGGDNGRVSAVLLQQGQMIWQQRVAQPNGATEID--RLNDIDMTPVVVDGVVY----- 259
Query: 138 LEEALPADQCCTFRGSLAKLDVRNGRIIWQTYM 170
+ GSL+ LD+R+G+I+W+ M
Sbjct: 260 ---------TLGYNGSLSALDLRSGQIVWKRDM 283
>gi|114763242|ref|ZP_01442666.1| Glucose dehydrogenase [Pelagibaca bermudensis HTCC2601]
gi|114544040|gb|EAU47050.1| Glucose dehydrogenase [Roseovarius sp. HTCC2601]
Length = 741
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 69/158 (43%), Gaps = 21/158 (13%)
Query: 152 GSLAKLDVRNGRIIWQTYMLPDNGGKRGGYSGAAVWGSSPAIDVIRRQKQNNQTTKPTHP 211
GS+ ++ + G + W +P+ +R G A VW + A + + P +
Sbjct: 325 GSVFSVNAQTGELEWTFDTIPEEIRERTGT--ANVWTAMSADEERGIVYLPVASPSPNYW 382
Query: 212 DQCISSDI-YANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGE 270
+ DI YA S ALDI++G + W++ +DI+ D D
Sbjct: 383 GGNRTEDIPYATSTTALDIETGEVIWSRQWVHHDIW------------------DYDINS 424
Query: 271 APMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDIIW 308
AP L+ I+ +G ++ K GF + +R++G+ IW
Sbjct: 425 APTLMDITVDGEEIPALMQATKMGFLFVVNRETGEDIW 462
>gi|322812785|pdb|3Q7M|A Chain A, The Crystal Structure Of Bamb From The Bam Complex In
Spacegroup I222
gi|322812786|pdb|3Q7N|A Chain A, The Crystal Structure Of Bamb From The Bam Complex In
Spacegroup P212121
Length = 376
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 94/243 (38%), Gaps = 58/243 (23%)
Query: 44 PAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG--------------LSGTGIVV 89
PA+A+ VVY G + A+NA +G IW +L++ G +SG + +
Sbjct: 49 PALADNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVSGGHVYI 108
Query: 90 NVTVAVVVAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCT 149
A V A++ S+G + W T++ S+ +S + + T
Sbjct: 109 GSEKAQVYALNTSDGTVAWQTKVAGEALSRPVVSDGLVL------------------IHT 150
Query: 150 FRGSLAKLDVRNGRIIWQTYMLPDNGGKRG------GYSGAAVWGSSPAIDVIRR----- 198
G L L+ +G + W + + RG + A V G + + +
Sbjct: 151 SNGQLQALNEADGAVKWTVNLDXPSLSLRGESAPTTAFGAAVVGGDNGRVSAVLXEQGQX 210
Query: 199 --QKQNNQTTKPTHPDQCISSDI-------------YANSIVALDIDSGRIAWAKPLGGY 243
Q++ +Q T T D+ D Y ++ ALD+ SG+I W + LG
Sbjct: 211 IWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQIXWKRELGSV 270
Query: 244 DIF 246
+ F
Sbjct: 271 NDF 273
Score = 38.9 bits (89), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 61/157 (38%), Gaps = 34/157 (21%)
Query: 32 WSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLS----KLTGLSGTGI 87
W + + P V++G+V + NG L A+N +GA+ W NL L G S
Sbjct: 127 WQTKVAGEALSRPVVSDGLVLIHTSNGQLQALNEADGAVKWTVNLDXPSLSLRGESAPTT 186
Query: 88 VVNVTVA-----VVVAVSRSNGELVW---------STQIDPRPRSQITMSGSVYMGAFYV 133
V V AV G+ +W ST+ID S + + V G +
Sbjct: 187 AFGAAVVGGDNGRVSAVLXEQGQXIWQQRISQATGSTEID--RLSDVDTTPVVVNGVVF- 243
Query: 134 GLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYM 170
+ G+L LD+R+G+I W+ +
Sbjct: 244 -------------ALAYNGNLTALDLRSGQIXWKREL 267
>gi|115500909|dbj|BAF34130.1| precursor of SSDA3 [Ketogulonicigenium vulgare]
Length = 578
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 78/340 (22%), Positives = 124/340 (36%), Gaps = 43/340 (12%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWS--FYAGKDISATPAVANGVVYFPSWNG 58
W+N+G + N R++ I V L+L W+ AGK I TP V +GV+Y +
Sbjct: 40 WINYGQNQENYRHS-PLTQITADNVGQLQLVWARGMEAGK-IQVTPLVHDGVMYLANPGD 97
Query: 59 YLYAVNAFNGALIWEQ-----NLSKLT---------GLSGTGIVVNVTVAVVVAVSRSNG 104
+ A++A G LIWE N++ L L GT + +VA+ S G
Sbjct: 98 VIQAIDAATGDLIWEHRRQLPNIATLNSFGEPTRGMALYGTNVYFVSWDNHLVALDTSTG 157
Query: 105 ELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRI 164
++V+ SG + V S+ Q F ++ D G
Sbjct: 158 QVVFDVDRGQGTDMVSNSSGPIVANGVIVAGSTC-------QYSPFGCFVSGHDSATGEE 210
Query: 165 IWQTYMLPDNGGKRGGYSG--------AAVWGSSPAIDVIRRQKQNNQTTKPTHPDQ--C 214
+W+ +P G + G VWG V P Q
Sbjct: 211 LWRNTFIPRAGEEGDETWGNDYEARWMTGVWGQITYDPVGGLVHYGTSAVGPAAEIQRGT 270
Query: 215 ISSDIY-ANSIVALDIDSGRIAWAK---PLGGYDIFYFTCLVPNNPDCPPGPNLDADFGE 270
+ +Y N+ A+ ++G I W P +D ++ N D P ++
Sbjct: 271 VGGSMYGTNTRFAVRPETGEIVWRHQTLPRDNWDQECTFEMMVVNVDVQPSAEMEGLHAI 330
Query: 271 APMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDIIWFK 310
P T G R V K+G W FD ++G+ +W +
Sbjct: 331 NPDAAT----GERRVVTGVPCKNGTMWQFDAETGEFLWAR 366
>gi|110634944|ref|YP_675152.1| Pyrrolo-quinoline quinone [Chelativorans sp. BNC1]
gi|110285928|gb|ABG63987.1| Pyrrolo-quinoline quinone [Chelativorans sp. BNC1]
Length = 563
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 80/350 (22%), Positives = 132/350 (37%), Gaps = 66/350 (18%)
Query: 6 GDLNNRRYAY---GEVLINPVTVRN---LRLRW--SFYAGKDISATPAVANGVVYFP--- 54
GD N R Y G +N +T N + W S A + + P V NG+++
Sbjct: 19 GDWPNYRRTYDGWGYSPLNQITTDNVADMEPVWMISTGAAEGHESPPMVINGIMFVTQAT 78
Query: 55 SWNGYLYAVNAFNGALIWE------------QNLSKLTGLSGTGIVVNVTVAVVVAVSRS 102
+ + + A+ A G ++W ++ G G I AV+VA+
Sbjct: 79 TTSNQVMAIKADTGEILWRYQRALPEDMHSSHPTNRGVGFWGDKIFFTSRDAVLVALDAK 138
Query: 103 NGELVWSTQIDPRPRSQIT-MSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRN 161
+G VW+ ID ++ V G VG S E + RG +A + +
Sbjct: 139 SGAEVWTAPIDDYKNGYYANLAPLVIDGKVIVGTSGGERGI--------RGFVAAFNADD 190
Query: 162 GRIIWQTYML-----------PDNGGKRGGYSGAAVWGS-SPAIDVIRRQKQNNQTTKPT 209
G+ +W+TY + PDN + G + G P +I N P
Sbjct: 191 GKEVWRTYTIPAPGEPGSETWPDNEAWKTGAGSTWITGHYDPENKLIYWGVGNG---GPW 247
Query: 210 HPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFG 269
DQ ++Y S++ALD +SG I G+ ++ P + D D
Sbjct: 248 MGDQRPGDNLYVTSVIALDPESGEIK------GHFQYH------------PNDSFDWDEV 289
Query: 270 EAPMLLTI-STNGRFRDVVVAVQKSGFAWAFDRDSGDIIWFKLAGPGGRE 318
AP+L+ + + +G +V ++G W +R I F P +E
Sbjct: 290 AAPILVDLPNKDGETVPGLVHAARNGVLWELERKPDGEIGFIKGTPYVKE 339
>gi|423196245|ref|ZP_17182828.1| outer membrane assembly lipoprotein YfgL [Aeromonas hydrophila SSU]
gi|404633046|gb|EKB29648.1| outer membrane assembly lipoprotein YfgL [Aeromonas hydrophila SSU]
Length = 394
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 53/98 (54%), Gaps = 8/98 (8%)
Query: 39 DISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLS--KLTGLSGTGIVVNVTVAVV 96
D+ ATP +A +Y ++NG L A +G +W++ S + ++G IV+ + + +
Sbjct: 247 DVDATPLIAGDELYAIAYNGQLMARKLMSGDEVWKRKYSGYRDMAVTGNAIVLTDSRSHL 306
Query: 97 VAVSRSNGELVWS-TQIDPRPRSQITMSGSVYMGAFYV 133
AV R NG +WS TQ++ R T++ V MG + V
Sbjct: 307 FAVDRRNGLELWSNTQLENR-----TVTAPVIMGDYVV 339
>gi|385234652|ref|YP_005795994.1| precursor of SSDA1 [Ketogulonicigenium vulgare WSH-001]
gi|115500905|dbj|BAF34128.1| precursor of SSDA1 [Ketogulonicigenium vulgare]
gi|343463563|gb|AEM41998.1| Precursor of SSDA1 [Ketogulonicigenium vulgare WSH-001]
Length = 579
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 72/348 (20%), Positives = 126/348 (36%), Gaps = 59/348 (16%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWS--FYAGKDISATPAVANGVVYFPSWNG 58
W+++G + N R++ I V L+L W+ GK + TP + +GV+Y +
Sbjct: 41 WISYGQNQENYRHS-PLTQITTENVGQLQLVWARGMQPGK-VQVTPLIHDGVMYLANPGD 98
Query: 59 YLYAVNAFNGALIWEQ-----NLSKLT---------GLSGTGIVVNVTVAVVVAVSRSNG 104
+ A++A G LIWE N++ L L GT + +VA+ + G
Sbjct: 99 VIQAIDAKTGDLIWEHRRQLPNIATLNSFGEPTRGMALYGTNVYFVSWDNHLVALDTATG 158
Query: 105 ELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRI 164
++ + SG + V S+ Q F ++ D G
Sbjct: 159 QVTFDVDRGQGEDMVSNSSGPIVANGVIVAGSTC-------QYSPFGCFVSGHDSATGEE 211
Query: 165 IWQTYMLPDNGGKRGGYSGAAVWGSS----------------PAIDVIRRQKQNNQTTKP 208
+W+ Y +P R G G WG+ P +++
Sbjct: 212 LWRNYFIP-----RAGEEGDETWGNDYEARWMTGAWGQITYDPVTNLVHYGSTAVGPASE 266
Query: 209 THPDQCISSDIYANSIVALDIDSGRIAWAK---PLGGYDIFYFTCLVPNNPDCPPGPNLD 265
T + N+ A+ D+G I W P +D ++ N D P ++
Sbjct: 267 TQRGTPGGTLYGTNTRFAVRPDTGEIVWRHQTLPRDNWDQECTFEMMVTNVDVQPSTEME 326
Query: 266 ADFGEAPMLLTISTN---GRFRDVVVAVQKSGFAWAFDRDSGDIIWFK 310
L +I+ N G R + K+G W FD ++G+ +W +
Sbjct: 327 G-------LQSINPNAATGERRVLTGVPCKTGTMWQFDAETGEFLWAR 367
>gi|425175338|ref|ZP_18573467.1| outer membrane assembly lipoprotein YfgL [Escherichia coli FDA504]
gi|408090998|gb|EKH24235.1| outer membrane assembly lipoprotein YfgL [Escherichia coli FDA504]
Length = 390
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 95/226 (42%), Gaps = 24/226 (10%)
Query: 44 PAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG--------------LSGTGIVV 89
PA+A+ VVY G + A+NA +G IW +L++ G +SG + +
Sbjct: 63 PALADNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVSGGHVYI 122
Query: 90 NVTVAVVVAVSRSNGELVWSTQIDPRPRSQITMS-GSVYMGAFYVGLSSLEEALPADQCC 148
A V A++ S+G + W T++ S+ +S G V + L +L EA A +
Sbjct: 123 GSEKAQVYALNTSDGTVAWQTKVAGEALSRPVVSDGLVLIHTSNGQLQALNEADGAVK-W 181
Query: 149 TFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYS------GAAVWGS--SPAIDVIRRQK 200
T + L +R + GG G S G +W S A +
Sbjct: 182 TVNLDMPSLSLRGESAPATAFGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDR 241
Query: 201 QNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIF 246
++ T P + + + Y ++ ALD+ SG+I W + LG + F
Sbjct: 242 LSDVDTTPAVVNGVVFALAYNGNLTALDLRSGQIMWKRELGSVNDF 287
Score = 43.1 bits (100), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 64/157 (40%), Gaps = 34/157 (21%)
Query: 32 WSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLS----KLTGLSGTGI 87
W + + P V++G+V + NG L A+N +GA+ W NL L G S
Sbjct: 141 WQTKVAGEALSRPVVSDGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPAT 200
Query: 88 VVNVTVA-----VVVAVSRSNGELVW---------STQIDPRPRSQITMSGSVYMGAFYV 133
V V AV G+++W ST+ID S + + +V G +
Sbjct: 201 AFGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEID--RLSDVDTTPAVVNGVVF- 257
Query: 134 GLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYM 170
+ G+L LD+R+G+I+W+ +
Sbjct: 258 -------------ALAYNGNLTALDLRSGQIMWKREL 281
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 62/131 (47%), Gaps = 19/131 (14%)
Query: 39 DISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG--LSGTGIVVNVTVAVV 96
D+ TPAV NGVV+ ++NG L A++ +G ++W++ L + + G I + V
Sbjct: 244 DVDTTPAVVNGVVFALAYNGNLTALDLRSGQIMWKRELGSVNDFIVDGNRIYLVDQNDRV 303
Query: 97 VAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAK 156
+A++ G +W TQ D R + S +Y G VG S G L
Sbjct: 304 MALTIDGGVTLW-TQSDLLHR--LLTSPVLYNGNLVVGDS--------------EGYLHW 346
Query: 157 LDVRNGRIIWQ 167
++V +GR + Q
Sbjct: 347 INVEDGRFVAQ 357
>gi|429097412|ref|ZP_19159518.1| Outer membrane protein YfgL, lipoprotein component of the protein
assembly complex (forms a complex with YaeT, YfiO, and
NlpB) [Cronobacter dublinensis 582]
gi|426283752|emb|CCJ85631.1| Outer membrane protein YfgL, lipoprotein component of the protein
assembly complex (forms a complex with YaeT, YfiO, and
NlpB) [Cronobacter dublinensis 582]
Length = 393
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 101/244 (41%), Gaps = 59/244 (24%)
Query: 44 PAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG---------LSG--TGIVVNVT 92
PA +G VY G + AVN+ +G +W +LS+ TG LSG T + +V
Sbjct: 65 PAFLDGTVYAADRRGTVKAVNSQDGKEVWSVDLSEKTGFFSRNRPALLSGGVTAVGAHVY 124
Query: 93 V----AVVVAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCC 148
V A V A++ S+G + W T++ S+ +S + +
Sbjct: 125 VGSEKAQVYALNTSDGSVAWQTKVAGEALSRPVVSDGLVL------------------IH 166
Query: 149 TFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYSGAAVWGSS--------PAIDVIRR-- 198
T G L L+ +G I W + + RG + A+ +G++ + +++R
Sbjct: 167 TSNGMLQALNESDGAIKWTVNLDMPSLSLRGESAPASAFGAAIVGGDNGRVSAVLMQRGQ 226
Query: 199 ---QKQNNQTTKPTHPDQCISSDI-------------YANSIVALDIDSGRIAWAKPLGG 242
Q++ +Q T T D+ D Y ++ ALD+ SG+I W + LG
Sbjct: 227 MIWQQRISQATGATEIDRLSDVDTTPVIVNGVVYALAYNGNLTALDLRSGQIMWKRELGS 286
Query: 243 YDIF 246
+ F
Sbjct: 287 VNDF 290
Score = 41.2 bits (95), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 63/153 (41%), Gaps = 26/153 (16%)
Query: 32 WSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLS----KLTGLSGTGI 87
W + + P V++G+V + NG L A+N +GA+ W NL L G S
Sbjct: 144 WQTKVAGEALSRPVVSDGLVLIHTSNGMLQALNESDGAIKWTVNLDMPSLSLRGESAPAS 203
Query: 88 VVNVTVA-----VVVAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEAL 142
+ V AV G+++W +I SQ T GA + S +
Sbjct: 204 AFGAAIVGGDNGRVSAVLMQRGQMIWQQRI-----SQAT-------GATEIDRLSDVDTT 251
Query: 143 PAD-----QCCTFRGSLAKLDVRNGRIIWQTYM 170
P + G+L LD+R+G+I+W+ +
Sbjct: 252 PVIVNGVVYALAYNGNLTALDLRSGQIMWKREL 284
Score = 39.7 bits (91), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 60/131 (45%), Gaps = 19/131 (14%)
Query: 39 DISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG--LSGTGIVVNVTVAVV 96
D+ TP + NGVVY ++NG L A++ +G ++W++ L + + G I + V
Sbjct: 247 DVDTTPVIVNGVVYALAYNGNLTALDLRSGQIMWKRELGSVNDFIVDGGRIFLVDQSDNV 306
Query: 97 VAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAK 156
+A++ G +W TQ R+ T +Y G+ VG S G L
Sbjct: 307 LALNVEGGVTLW-TQTQLLHRNLTT--PVLYNGSLVVGDS--------------EGYLHW 349
Query: 157 LDVRNGRIIWQ 167
+D NGR + Q
Sbjct: 350 MDTDNGRFVAQ 360
>gi|425289650|ref|ZP_18680490.1| outer membrane assembly lipoprotein YfgL [Escherichia coli 3006]
gi|432527274|ref|ZP_19764366.1| lipoprotein yfgL [Escherichia coli KTE233]
gi|408213025|gb|EKI37529.1| outer membrane assembly lipoprotein YfgL [Escherichia coli 3006]
gi|431063094|gb|ELD72351.1| lipoprotein yfgL [Escherichia coli KTE233]
Length = 392
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 94/226 (41%), Gaps = 24/226 (10%)
Query: 44 PAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG--------------LSGTGIVV 89
PA+A+ VVY G + A+NA +G IW +L++ G +SG + +
Sbjct: 65 PALADNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVSGGHVYI 124
Query: 90 NVTVAVVVAVSRSNGELVWSTQIDPRPRSQ-ITMSGSVYMGAFYVGLSSLEEALPADQCC 148
A V A++ S+G + W T++ S+ + G V + L +L EA A +
Sbjct: 125 GSEKAQVYALNTSDGTVAWQTKVAGEALSRPVVSDGLVLIHTSNGQLQALNEADGAVK-W 183
Query: 149 TFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYS------GAAVWGS--SPAIDVIRRQK 200
T + L +R + GG G S G +W S A +
Sbjct: 184 TVNLDMPSLSLRGESAPATAFGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDR 243
Query: 201 QNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIF 246
++ T P + + + Y ++ ALD+ SG+I W + LG + F
Sbjct: 244 LSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQIMWKRELGSVNDF 289
Score = 42.0 bits (97), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 63/157 (40%), Gaps = 34/157 (21%)
Query: 32 WSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLS----KLTGLSGTGI 87
W + + P V++G+V + NG L A+N +GA+ W NL L G S
Sbjct: 143 WQTKVAGEALSRPVVSDGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPAT 202
Query: 88 VVNVTVA-----VVVAVSRSNGELVW---------STQIDPRPRSQITMSGSVYMGAFYV 133
V V AV G+++W ST+ID S + + V G +
Sbjct: 203 AFGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEID--RLSDVDTTPVVVNGVVF- 259
Query: 134 GLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYM 170
+ G+L LD+R+G+I+W+ +
Sbjct: 260 -------------ALAYNGNLTALDLRSGQIMWKREL 283
>gi|385332901|ref|YP_005886852.1| quinoprotein alcohol dehydrogenase [Marinobacter adhaerens HP15]
gi|311696051|gb|ADP98924.1| quinoprotein alcohol dehydrogenase [Marinobacter adhaerens HP15]
Length = 591
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 72/351 (20%), Positives = 132/351 (37%), Gaps = 75/351 (21%)
Query: 2 LNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAGKDI----SATPAVANGVVYFPSWN 57
+++G +RY+ E L N V+ L+ W+F G + + P + +GV+Y +
Sbjct: 42 VSYGMGTQGQRYSILEDL-NTSNVQYLQPAWAFSFGSEKMRGQESQPLIKDGVMYVTASY 100
Query: 58 GYLYAVNAFNGALIWEQN-------------LSKLTGLSGTGIVVNVTVAVVVAVSRSNG 104
+YA++A G IW+ + +++ + G ++ A +VA+++ G
Sbjct: 101 SRIYAIDARTGEEIWQYDARLPDGIMPCCDVVNRGAAIYGDKVIFGTLDAKLVALNKDTG 160
Query: 105 ELVWSTQI-DPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGR 163
+ +W ++ D + IT + V G G+S E + G + D G
Sbjct: 161 KPMWIKKVADYQAGYAITAAPMVIKGKVITGVSGGEFGI--------VGKVEAYDANTGD 212
Query: 164 IIWQT--------YMLPD--------NGGKRG--------GYSGAAVW---GSSPAIDVI 196
++W Y+ D +GGK G GAA W P D +
Sbjct: 213 LVWTRPTVEGHMGYVYKDGKKIENGISGGKAGVTWPGEMWKNGGAATWLGGTYDPDTDSL 272
Query: 197 RRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNP 256
N P + +++++S +A+D D G I W +F
Sbjct: 273 FFGTGN---PAPWNSHLRPGDNLFSSSRLAIDPDDGSIKW----------HFQTT----- 314
Query: 257 DCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
P D D + NG+ ++GF + +R++GD I
Sbjct: 315 ---PNDGWDYDGVNELISFDYEENGKTVKAAATADRNGFFYVLNRENGDFI 362
>gi|114046808|ref|YP_737358.1| outer membrane protein assembly complex subunit YfgL [Shewanella
sp. MR-7]
gi|113888250|gb|ABI42301.1| Pyrrolo-quinoline quinone [Shewanella sp. MR-7]
Length = 395
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 76/169 (44%), Gaps = 21/169 (12%)
Query: 10 NRRYAYGEV-LINPVTVRNLRLRWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNG 68
N+ + GE L+ + + ++ W AG ++ + P VA+ VV + +G L A N G
Sbjct: 122 NKIFVGGESGLLAALNAEDGQVLWHVVAGGELLSKPTVADDVVVVSTSSGALEAFNVDTG 181
Query: 69 ALIW--EQNLSKLTGLSGT--------GIVVNVTVAVVVAVSRSNGELVWSTQI-DPRPR 117
A +W E L LT L GT G + V V ++NG+ W I +
Sbjct: 182 AKLWAYEMQLPNLT-LRGTGSAAYEAGGFFIGTADGKVAVVVKNNGQAAWEQAIYNSTGG 240
Query: 118 SQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIW 166
++ T V M +G + L A ++ G+L +++R GR++W
Sbjct: 241 NEFTRMADVDMTPLILG-----DNLYA---VSYNGNLVSMELRTGRVVW 281
>gi|432852170|ref|ZP_20082212.1| lipoprotein yfgL [Escherichia coli KTE144]
gi|431399426|gb|ELG82833.1| lipoprotein yfgL [Escherichia coli KTE144]
Length = 392
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 94/226 (41%), Gaps = 24/226 (10%)
Query: 44 PAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG--------------LSGTGIVV 89
PA+A+ VVY G + A+NA +G IW +L++ G +SG + +
Sbjct: 65 PALADNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVSGGHVYI 124
Query: 90 NVTVAVVVAVSRSNGELVWSTQIDPRPRSQ-ITMSGSVYMGAFYVGLSSLEEALPADQCC 148
A V A++ S+G + W T++ S+ + G V + L +L EA A +
Sbjct: 125 GSEKAQVYALNTSDGTVAWQTKVAGEALSRPVVSDGLVLIHTSNGQLQALNEADGAVK-W 183
Query: 149 TFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYS------GAAVWGS--SPAIDVIRRQK 200
T + L +R + GG G S G +W S A +
Sbjct: 184 TVNLDMPSLSLRGESAPATAFGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDR 243
Query: 201 QNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIF 246
++ T P + + + Y ++ ALD+ SG+I W + LG + F
Sbjct: 244 LSDVDTTPIVVNGVVFALAYNGNLTALDLRSGQIMWKRELGSVNDF 289
Score = 42.0 bits (97), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 63/157 (40%), Gaps = 34/157 (21%)
Query: 32 WSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLS----KLTGLSGTGI 87
W + + P V++G+V + NG L A+N +GA+ W NL L G S
Sbjct: 143 WQTKVAGEALSRPVVSDGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPAT 202
Query: 88 VVNVTVA-----VVVAVSRSNGELVW---------STQIDPRPRSQITMSGSVYMGAFYV 133
V V AV G+++W ST+ID S + + V G +
Sbjct: 203 AFGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEID--RLSDVDTTPIVVNGVVF- 259
Query: 134 GLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYM 170
+ G+L LD+R+G+I+W+ +
Sbjct: 260 -------------ALAYNGNLTALDLRSGQIMWKREL 283
Score = 38.5 bits (88), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 61/131 (46%), Gaps = 19/131 (14%)
Query: 39 DISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG--LSGTGIVVNVTVAVV 96
D+ TP V NGVV+ ++NG L A++ +G ++W++ L + + G I + V
Sbjct: 246 DVDTTPIVVNGVVFALAYNGNLTALDLRSGQIMWKRELGSVNDFIVDGNRIYLVDQNDRV 305
Query: 97 VAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAK 156
+A++ G +W TQ D R + S +Y G VG S G L
Sbjct: 306 MALTIDGGVTLW-TQSDLLHR--LLTSPVLYNGNLVVGDS--------------EGYLHW 348
Query: 157 LDVRNGRIIWQ 167
++V +GR + Q
Sbjct: 349 INVEDGRFVAQ 359
>gi|411009712|ref|ZP_11386041.1| WD40 domain-containing protein [Aeromonas aquariorum AAK1]
Length = 394
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 53/98 (54%), Gaps = 8/98 (8%)
Query: 39 DISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLS--KLTGLSGTGIVVNVTVAVV 96
D+ ATP +A +Y ++NG L A +G +W++ S + ++G IV+ + + +
Sbjct: 247 DVDATPLIAGDELYAIAYNGQLMARKLMSGDEVWKRKYSGYRDMAVTGNAIVLTDSRSHL 306
Query: 97 VAVSRSNGELVWS-TQIDPRPRSQITMSGSVYMGAFYV 133
AV R NG +WS TQ++ R T++ V MG + V
Sbjct: 307 FAVDRRNGLELWSNTQLENR-----TVTAPVIMGDYVV 339
>gi|379335432|gb|AFD03412.1| quinoprotein alcohol dehydrogenase PPQ-dependent protein
[uncultured archaeon W5-61a]
Length = 592
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 70/313 (22%), Positives = 116/313 (37%), Gaps = 69/313 (22%)
Query: 40 ISATPAVANGVVYFPSWNGYLYAVNAFNGALIW----------------EQNLSKLTGLS 83
I TP + G+VY S L A+ A +G +W ++ ++ +
Sbjct: 66 IQTTPLIFQGIVYIASGYNELLAIEASSGKELWSFRPDLASYGDASFWPKRLATRSLSIH 125
Query: 84 GTGIVVNVTVAVVVAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFY-VGLSSLEEAL 142
I + + + + GE+ + + PR QI + +Y F +L
Sbjct: 126 SGSIYMQTSECSIYGFGLTTGEVNF---LLPRTCDQIPGNSGLYFATFAPTFFDNLLITR 182
Query: 143 PADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNGGKRG-GYSGA---------AVWGSSP- 191
RG ++ D+ ++WQ +P GG G S A WG S
Sbjct: 183 AQGNAFGGRGFVSAYDLTTKELVWQWLSVPPEGGDPNWGISEADKGNIAPFKGDWGDSDL 242
Query: 192 ----------AID------VIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIA 235
AID + + NQ P ++++NSIVALD +G +
Sbjct: 243 IGGGTSWGLIAIDSEAGKIFLLTGEPANQFDAALRP----GPNLFSNSIVALDARTGEMV 298
Query: 236 WAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGF 295
W +G +DI NN D PG + +L I G R VV++ KS F
Sbjct: 299 WYYQVGPHDI--------NNHD--PGWKV--------ILAQIDQGGVNRKVVISATKSNF 340
Query: 296 AWAFDRDSGDIIW 308
+ D ++G+ ++
Sbjct: 341 VYVLDAETGEQVF 353
>gi|429087659|ref|ZP_19150391.1| Outer membrane protein YfgL, lipoprotein component of the protein
assembly complex (forms a complex with YaeT, YfiO, and
NlpB) [Cronobacter universalis NCTC 9529]
gi|426507462|emb|CCK15503.1| Outer membrane protein YfgL, lipoprotein component of the protein
assembly complex (forms a complex with YaeT, YfiO, and
NlpB) [Cronobacter universalis NCTC 9529]
Length = 393
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 96/244 (39%), Gaps = 59/244 (24%)
Query: 44 PAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTGL---------------SGTGIV 88
PA +G VY G + AVN+ +G IW +LS+ TG G +
Sbjct: 65 PAFLDGNVYAADRRGTVKAVNSQDGKEIWSIDLSEKTGFFSRNRPALLSGGLTAVGAHVY 124
Query: 89 VNVTVAVVVAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCC 148
V A V A++ S+G + W T++ S+ +S + +
Sbjct: 125 VGSEKAQVYALNTSDGSIAWQTKVAGEALSRPVVSDGLVL------------------VH 166
Query: 149 TFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYSGAAVWGSS--------PAIDVIRR-- 198
T G L L+ +G I W + + RG + A+ +G++ + +++R
Sbjct: 167 TSNGMLQALNESDGAIKWTVNLDMPSLSLRGESAPASAFGAAIVGGDNGRVSAVLMQRGQ 226
Query: 199 ---QKQNNQTTKPTHPDQCISSDI-------------YANSIVALDIDSGRIAWAKPLGG 242
Q++ +Q T T D+ D Y ++ ALD+ SG+I W + LG
Sbjct: 227 MIWQQRISQATGATEIDRLSDVDTTPVVVNGVVYALAYNGNLTALDLRSGQIMWKRELGS 286
Query: 243 YDIF 246
+ F
Sbjct: 287 VNDF 290
Score = 41.2 bits (95), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 62/157 (39%), Gaps = 30/157 (19%)
Query: 30 LRWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLS----KLTGLSGT 85
+ W + + P V++G+V + NG L A+N +GA+ W NL L G S
Sbjct: 142 IAWQTKVAGEALSRPVVSDGLVLVHTSNGMLQALNESDGAIKWTVNLDMPSLSLRGESAP 201
Query: 86 GIVVNVTVA-----VVVAVSRSNGELVWSTQI-------DPRPRSQITMSGSVYMGAFYV 133
+ V AV G+++W +I + S + + V G Y
Sbjct: 202 ASAFGAAIVGGDNGRVSAVLMQRGQMIWQQRISQATGATEIDRLSDVDTTPVVVNGVVY- 260
Query: 134 GLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYM 170
+ G+L LD+R+G+I+W+ +
Sbjct: 261 -------------ALAYNGNLTALDLRSGQIMWKREL 284
Score = 39.3 bits (90), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 61/132 (46%), Gaps = 21/132 (15%)
Query: 39 DISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG--LSGTGIVVNVTVAVV 96
D+ TP V NGVVY ++NG L A++ +G ++W++ L + + G I + V
Sbjct: 247 DVDTTPVVVNGVVYALAYNGNLTALDLRSGQIMWKRELGSVNDFIVDGGRIYLVDQNDNV 306
Query: 97 VAVSRSNGELVWS-TQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLA 155
+A++ G +W+ TQ+ R + + Y G+ VG S G L
Sbjct: 307 LALNVEGGVTLWTQTQLLHRNLTAPVL----YNGSLVVGDS--------------EGYLH 348
Query: 156 KLDVRNGRIIWQ 167
+D NGR + Q
Sbjct: 349 WMDTDNGRFVAQ 360
>gi|167588813|ref|ZP_02381201.1| quinate/shikimate dehydrogenase, putative [Burkholderia ubonensis
Bu]
Length = 670
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 79/195 (40%), Gaps = 41/195 (21%)
Query: 129 GAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYSGAAVWG 188
GA VG + L+ L G + D R G+++W + +P+NG +GA+ W
Sbjct: 219 GAVIVGSNILDFPLAQPMAP---GDVRGFDPRTGQLLWTFHTVPENG-----ETGASTWV 270
Query: 189 SSPAID-----VIRRQKQNNQTTKPTHPDQCISSDIYA----------NSIVALDIDSGR 233
++ ++ V ++++ P S+D Y +S++AL +G+
Sbjct: 271 ANDNVNTGGANVWAPMSCDSESGIVYLPVSTPSNDYYGGKRAGDGWFGDSLLALRGRTGK 330
Query: 234 IAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKS 293
+ W L + ++ D D AP L + +GR V V K
Sbjct: 331 LVWNYQLIHHGLW------------------DYDPPAAPTLFDVRHDGRLVKAVAQVSKQ 372
Query: 294 GFAWAFDRDSGDIIW 308
GF + FDR SG IW
Sbjct: 373 GFVYVFDRTSGRPIW 387
>gi|238794827|ref|ZP_04638428.1| hypothetical protein yinte0001_7850 [Yersinia intermedia ATCC
29909]
gi|238725840|gb|EEQ17393.1| hypothetical protein yinte0001_7850 [Yersinia intermedia ATCC
29909]
Length = 393
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 66/161 (40%), Gaps = 36/161 (22%)
Query: 29 RLRWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLS----KLTGLSG 84
++ W + + P V++GVV + NG L A+N +GA+ W NL L G S
Sbjct: 141 QVAWQTVVAGEALSRPIVSDGVVLIHTSNGMLQALNESDGAIKWTLNLDTPALSLRGESA 200
Query: 85 TGIVVNVTVA-----VVVAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLE 139
+ + V AV G+L+W +I SQ+T G + ++
Sbjct: 201 PAVAFGAAIVGGDNGRVSAVMMEQGQLIWQQRI-----SQVT------------GTTEID 243
Query: 140 EALPADQ----------CCTFRGSLAKLDVRNGRIIWQTYM 170
D + G+L LD+R+G+I+W+ M
Sbjct: 244 RLNDVDTTPVVVDGVVYALAYNGNLTALDLRSGQILWKREM 284
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 87/230 (37%), Gaps = 41/230 (17%)
Query: 44 PAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTGL---------------SGTGIV 88
PA V+ G + A++A +G IW+ +LS+ T SG +
Sbjct: 65 PAWQGTTVFAADRKGLVKAMDADSGKQIWQTDLSEKTNFLSSNRSAMLSGGVTASGAHVY 124
Query: 89 VNVTVAVVVAVSRSNGELVWSTQIDPRPRSQ-ITMSGSVYMGAFYVGLSSLEEALPADQ- 146
V AVV A++ +G++ W T + S+ I G V + L +L E+ A +
Sbjct: 125 VGSEKAVVYALNSDDGQVAWQTVVAGEALSRPIVSDGVVLIHTSNGMLQALNESDGAIKW 184
Query: 147 -------CCTFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYS------GAAVWGS--SP 191
+ RG A I+ GG G S G +W S
Sbjct: 185 TLNLDTPALSLRGESAPAVAFGAAIV---------GGDNGRVSAVMMEQGQLIWQQRISQ 235
Query: 192 AIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLG 241
+ N+ T P D + + Y ++ ALD+ SG+I W + +G
Sbjct: 236 VTGTTEIDRLNDVDTTPVVVDGVVYALAYNGNLTALDLRSGQILWKREMG 285
>gi|313147775|ref|ZP_07809968.1| pyrrolo-quinoline quinone [Bacteroides fragilis 3_1_12]
gi|313136542|gb|EFR53902.1| pyrrolo-quinoline quinone [Bacteroides fragilis 3_1_12]
Length = 465
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 66/297 (22%), Positives = 116/297 (39%), Gaps = 47/297 (15%)
Query: 24 TVRNLRLRWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIW-----EQNLSK 78
T+++ + W+F +GK I TP VA+GVV F S + +Y ++A G W E L
Sbjct: 166 TLKSGQKLWNFQSGKRIVGTPDVADGVVVFGSADHNIYGLDARTGKERWRVTAGEPVLGA 225
Query: 79 LTGLSGTGIVVNVTVAVVVAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSL 138
+T G + + + A+ +G+++WS Y G+
Sbjct: 226 VTIEKGVA-YIGASDSTFRAIHIKSGKVLWS----------------------YAGIKGY 262
Query: 139 EEALPADQ-----CCTFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYSGAAVWGSSPAI 193
E P + + +L LD NG+ +W+ G R +S AAVW +
Sbjct: 263 VETKPLIEGNKVIFGAWDNTLYALDKTNGKELWKW----TGGLTRMHFSPAAVWPVAAHG 318
Query: 194 DVIRRQKQNNQTTKPTHPDQCI--SSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCL 251
V Q T + + + + L D RI ++K + + Y T
Sbjct: 319 KVFITDPQRAMTAINLETGETVWRTFQSMVRETIGLSADKKRI-YSKTMNDSVVCYST-- 375
Query: 252 VPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDIIW 308
+ + P N+ + AP + + +G VV + K G +A + +G ++W
Sbjct: 376 IGDVPKKLWASNVGFGYEHAPS-MQMEKDG----VVFSSTKEGLIFALEASTGQVLW 427
>gi|397164515|ref|ZP_10487970.1| outer membrane assembly lipoprotein YfgL [Enterobacter
radicincitans DSM 16656]
gi|396093663|gb|EJI91218.1| outer membrane assembly lipoprotein YfgL [Enterobacter
radicincitans DSM 16656]
Length = 392
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 92/226 (40%), Gaps = 24/226 (10%)
Query: 44 PAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG--------------LSGTGIVV 89
PA A+GVVY +G + AV+ +G IW NL++ G +SG + V
Sbjct: 65 PAFADGVVYAADRHGVVKAVSIEDGHEIWSVNLAEKDGWFSTRAALLSGGVTVSGGHVYV 124
Query: 90 NVTVAVVVAVSRSNGELVWSTQIDPRPRSQITMS-GSVYMGAFYVGLSSLEEALPADQCC 148
A V A++ S+G W ++ S+ +S G V + L +L E+ A +
Sbjct: 125 GTEKAQVYALNTSDGSKAWQAKVAGEALSRPVVSDGLVLIHTSNGQLQALNESDGAVK-W 183
Query: 149 TFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYS------GAAVWGS--SPAIDVIRRQK 200
T + L +R + GG G S G +W S A +
Sbjct: 184 TVNLDMPALSLRGESAPTTAFGAAIVGGDNGRVSAVLMQQGQMIWQQRISQANGPTEIDR 243
Query: 201 QNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIF 246
++ T P D + + Y ++ ALD+ SG+I W + LG F
Sbjct: 244 LSDVDTTPVVVDNVVYALAYNGNLTALDLRSGQIMWKRELGSVSDF 289
Score = 38.5 bits (88), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 60/155 (38%), Gaps = 30/155 (19%)
Query: 32 WSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLS----KLTGLSGTGI 87
W + + P V++G+V + NG L A+N +GA+ W NL L G S
Sbjct: 143 WQAKVAGEALSRPVVSDGLVLIHTSNGQLQALNESDGAVKWTVNLDMPALSLRGESAPTT 202
Query: 88 VVNVTVA-----VVVAVSRSNGELVWSTQI-------DPRPRSQITMSGSVYMGAFYVGL 135
+ V AV G+++W +I + S + + V Y
Sbjct: 203 AFGAAIVGGDNGRVSAVLMQQGQMIWQQRISQANGPTEIDRLSDVDTTPVVVDNVVY--- 259
Query: 136 SSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYM 170
+ G+L LD+R+G+I+W+ +
Sbjct: 260 -----------ALAYNGNLTALDLRSGQIMWKREL 283
>gi|386826280|ref|ZP_10113387.1| PQQ-dependent dehydrogenase, methanol/ethanol family [Beggiatoa
alba B18LD]
gi|386427164|gb|EIJ40992.1| PQQ-dependent dehydrogenase, methanol/ethanol family [Beggiatoa
alba B18LD]
Length = 598
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 76/358 (21%), Positives = 136/358 (37%), Gaps = 84/358 (23%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAG--KDISATPAVANGVVY----FP 54
W+ GG+ + RY+ + IN V+ LR W+F G + P V Y FP
Sbjct: 39 WVMWGGNYSGTRYSTLD-QINNKNVKELRPVWTFSTGVLRGHEGGPLVVGDTQYVHTPFP 97
Query: 55 SWNGYLYAVNAFNGALIW----EQN-----------LSKLTGLSGTGIVVNVTVAVVVAV 99
+ +YA++ + + W +QN +++ + + + +VA+
Sbjct: 98 N---KVYAIDLNDQTVKWMYEPKQNPDVIAIMCCDTVNRGLAYADGKVFLQQADTTLVAL 154
Query: 100 SRSNGELVWSTQI-DPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLD 158
G +VWS + DP T + + + G+S E + RG L
Sbjct: 155 DAKTGAVVWSIKNGDPSKGETNTNAPLIIKDKIFTGISGGEFGV--------RGRLTAYY 206
Query: 159 VRNGRIIWQTYML-PDNG---------------GKRGGYS----------GAAVWG---S 189
+++G + WQ + + PD GK S G WG
Sbjct: 207 IKDGSVAWQAHSVGPDKDLLVDPEKTTAMLKPIGKDSSVSTWQGDQWKTGGGTTWGWYTY 266
Query: 190 SPAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFT 249
PA++++ N T P Q + ++ +I+A D D+G W F T
Sbjct: 267 DPALNLVYYGTGNPSTWNPA---QRPGDNKWSMTIMARDADTGMAKW--------FFQKT 315
Query: 250 CLVPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
P D D +L+ G+ R ++V + ++GFA+ DR++G+++
Sbjct: 316 ----------PHDEWDYDGVNENILVDKEFQGKPRKLLVNMDRNGFAYTLDRETGELL 363
>gi|448459115|ref|ZP_21596562.1| pyrrolo-quinoline quinone [Halorubrum lipolyticum DSM 21995]
gi|445808700|gb|EMA58759.1| pyrrolo-quinoline quinone [Halorubrum lipolyticum DSM 21995]
Length = 421
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 53/113 (46%), Gaps = 10/113 (8%)
Query: 31 RWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWE-----QNLSKLTGLSGT 85
RW+F G +S++P VA + + S +G LYAV+A +G WE + S T GT
Sbjct: 178 RWTFETGGAVSSSPTVAGDIAFVGSTDGRLYAVDADSGERRWEFETDAEVSSSPTVADGT 237
Query: 86 GIVVNVTVAVVVAVSRSNGELVWS----TQIDPRPRSQITMSGSVYMGAFYVG 134
V + + AV +GE W +ID P I S +V G +VG
Sbjct: 238 AFVGSRD-QTLYAVDAESGEQRWEFGTGDRIDSSPTVAIDSSPTVAGGVVFVG 289
Score = 42.7 bits (99), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 82/181 (45%), Gaps = 23/181 (12%)
Query: 31 RWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIW-----EQNLSKLTGLSGT 85
W F G + ++P VA+G +F S +G LYAV+A G W E S T ++GT
Sbjct: 58 EWVFETGNQVWSSPTVADGTAFFGSADGSLYAVDADAGEQQWAFETPEPIQSSPTVVAGT 117
Query: 86 GIVVNVTVAVVVAVSRSNGELVWSTQIDPRPRSQITMS-GSVYMGAFYVGLSSLEEALPA 144
V + AV ++G+ W+ + D S T++ +V++G+ L ++ +A
Sbjct: 118 AF-VGSNDGNLYAVDAASGDRRWTFETDDVVFSSPTVARDTVFVGSVDSALYAV-DATSG 175
Query: 145 DQCCTFR------------GSLAKLDVRNGRIIWQTYMLPDNGGKRGGYSGAAVWGSSPA 192
D+ TF G +A + +GR+ + D+G +R + A SSP
Sbjct: 176 DRRWTFETGGAVSSSPTVAGDIAFVGSTDGRLY---AVDADSGERRWEFETDAEVSSSPT 232
Query: 193 I 193
+
Sbjct: 233 V 233
>gi|384919801|ref|ZP_10019837.1| quinoprotein glucose dehydrogenase [Citreicella sp. 357]
gi|384466320|gb|EIE50829.1| quinoprotein glucose dehydrogenase [Citreicella sp. 357]
Length = 659
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 86/202 (42%), Gaps = 25/202 (12%)
Query: 152 GSLAKLDVRNGRIIWQTYMLPDNGGKRGGYSGAAVWGSSPAIDVIRRQKQNNQTTKPTHP 211
GS+ ++ ++G + W LP++ R G A VW + A + + P +
Sbjct: 244 GSVFSVNAQSGALEWTFDTLPEDIRARTGT--ANVWTAMSADEDRGIVYLPVASPSPNYW 301
Query: 212 DQCISSDI-YANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGE 270
+ DI YA S ALD+D+G + W++ +DI+ D D
Sbjct: 302 GGNRTEDIPYATSTTALDVDTGEVIWSRQWVHHDIW------------------DYDINA 343
Query: 271 APMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDIIW--FKLAGPGGREGGGVWGAATD 328
AP L+ I+ +G ++ K GF + +R++G+ IW + P G G +
Sbjct: 344 APTLMDITVDGENVPALMQPTKMGFLFVVNRETGEDIWPIEERPVPAGDIPGERYAETQP 403
Query: 329 GRRVYTNIVNNDRI--IWSTAD 348
V +++ R+ +W+ AD
Sbjct: 404 FPTVPAPLLDQSRLPDVWTLAD 425
>gi|383643088|ref|ZP_09955494.1| Pyrrolo-quinoline quinone [Sphingomonas elodea ATCC 31461]
Length = 443
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 60/123 (48%), Gaps = 4/123 (3%)
Query: 6 GDLNNRRYAYGEVLINPVTVRNLRLRWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNA 65
G+LN RY G L V RN + S + DI A P + G VY G + AV+
Sbjct: 258 GELNAYRYENGLSLWGDVLTRNT-MTTSVSSLSDIDAEPVIDQGRVYALGEGGRMVAVDI 316
Query: 66 FNGALIWEQNLSKLTGLSGTG--IVVNVTVAVVVAVSRSNGELVWSTQIDPRPRSQITMS 123
+G+ +WEQ++ L G + V A ++ +SRS+G+ W Q+ + R++ +
Sbjct: 317 TSGSTLWEQSIGGLASPYAVGEWLFVVTDDARLLCLSRSSGKPRWIVQLQ-KYRNEKKLK 375
Query: 124 GSV 126
G +
Sbjct: 376 GPI 378
>gi|296104191|ref|YP_003614337.1| outer membrane protein assembly complex subunit YfgL [Enterobacter
cloacae subsp. cloacae ATCC 13047]
gi|295058650|gb|ADF63388.1| outer membrane protein assembly complex subunit YfgL [Enterobacter
cloacae subsp. cloacae ATCC 13047]
Length = 392
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 90/227 (39%), Gaps = 26/227 (11%)
Query: 44 PAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG--------------LSGTGIVV 89
PA A+ V+Y G + A+NA +G +W NL++ G ++G + V
Sbjct: 65 PAFADSVIYAADRKGTVKALNADDGKEVWSVNLAEKDGWFSRKPALLSGGLTVAGGHVYV 124
Query: 90 NVTVAVVVAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCC- 148
A + A++ S+G + W T + S+ +S + + + L+ AD
Sbjct: 125 GSEKAQIYALNTSDGSVAWQTTVAGESLSRPVVSDGLVL--IHTSNGQLQALNEADGLVK 182
Query: 149 -TFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYS------GAAVWGS--SPAIDVIRRQ 199
T + L +R + GG G S G +W S A
Sbjct: 183 WTVNLDMPSLSLRGESAPATAFGAAIVGGDNGRVSAVLMQQGQMIWQQRISQATGSTEID 242
Query: 200 KQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIF 246
+ N+ T P + + + Y ++ ALD+ SG+I W + LG + F
Sbjct: 243 RLNDVDTTPVIVNGVVYALAYNGNLTALDLRSGQIMWKRELGSVNDF 289
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 53/101 (52%), Gaps = 5/101 (4%)
Query: 39 DISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG--LSGTGIVVNVTVAVV 96
D+ TP + NGVVY ++NG L A++ +G ++W++ L + + G I + +
Sbjct: 246 DVDTTPVIVNGVVYALAYNGNLTALDLRSGQIMWKRELGSVNDFIVDGNRIYMVDQNDRL 305
Query: 97 VAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSS 137
+A+S G +W TQ D R + + ++Y G+ VG S
Sbjct: 306 LALSTDGGVTLW-TQSDLLHR--LLTAPALYNGSLVVGDSE 343
>gi|448350691|ref|ZP_21539503.1| pyrrolo-quinoline quinone [Natrialba taiwanensis DSM 12281]
gi|445636260|gb|ELY89423.1| pyrrolo-quinoline quinone [Natrialba taiwanensis DSM 12281]
Length = 561
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 68/149 (45%), Gaps = 11/149 (7%)
Query: 1 WLNHGGDLNNRRY-AYGEVLINPVTVRNLRLRWSFYAGKDISATPAVANGVVYFPSWNGY 59
W +H GD + RY A G + + L WS +T AVA+ VY S +G
Sbjct: 48 WPSHRGDPGHARYIADG----HEFSGGELEAAWSVEGAG--GSTIAVADETVY-TSTDGG 100
Query: 60 LYAVNAFNGALIWEQNLSKLTGLSGTGIVVNVTVAVVVAVSRSNGELVWSTQIDPRPRSQ 119
+ A++A +G ++WE S G V ++ VVA+ R+NG + W T+ D P +
Sbjct: 101 VVALDATDGTVVWENTDIDAGTPSVAGETVYLSGNEVVALDRANGSVRWETEFD--PEEE 158
Query: 120 ITMSGSVYMGAFYVGLSSLEEALPADQCC 148
I Y G + V +L AL AD
Sbjct: 159 IVWQTVAYGGVYAVADGTL-YALEADDGS 186
>gi|289580291|ref|YP_003478757.1| pyrrolo-quinoline quinone [Natrialba magadii ATCC 43099]
gi|289529844|gb|ADD04195.1| Pyrrolo-quinoline quinone [Natrialba magadii ATCC 43099]
Length = 352
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 57/111 (51%), Gaps = 8/111 (7%)
Query: 26 RNLRLRWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTGLSGT 85
R+ W+F G + +PAV +G VY S + LYA+NA +G W + +
Sbjct: 155 RDGTEEWAFETGDSVQTSPAVDDGTVYAGSRDNSLYALNAADGTEEWA--FETESSIVSD 212
Query: 86 GIVVNVTVAV-----VVAVSRSNGELVWSTQIDPRPRSQITMS-GSVYMGA 130
VVN T+ + V++ ++GE +WS + + S T++ G+VY+G+
Sbjct: 213 PTVVNGTIYIANSDGVLSAVDTHGEELWSFETNGGTNSNPTVADGTVYVGS 263
Score = 45.1 bits (105), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 54/112 (48%), Gaps = 4/112 (3%)
Query: 32 WSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKL--TGLSGTGIV- 88
WSF ++ P VA+G VY S +G LYAV+A +G W + L + S GIV
Sbjct: 240 WSFETNGGTNSNPTVADGTVYVGSGDGKLYAVDASDGTEEWTFDTDGLVFSPSSADGIVY 299
Query: 89 VNVTVAVVVAVSRSNGELVWSTQIDPRPRSQITMSGS-VYMGAFYVGLSSLE 139
V + AV ++G WS Q D S +S V +G+F L +LE
Sbjct: 300 VGSADNSLYAVDAADGSERWSYQTDDEVGSTPAISDELVVVGSFDGTLHALE 351
>gi|238797967|ref|ZP_04641457.1| hypothetical protein ymoll0001_28290 [Yersinia mollaretii ATCC
43969]
gi|238718172|gb|EEQ09998.1| hypothetical protein ymoll0001_28290 [Yersinia mollaretii ATCC
43969]
Length = 393
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 66/161 (40%), Gaps = 36/161 (22%)
Query: 29 RLRWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLS----KLTGLSG 84
++ W + + P V++GVV + NG L A+N +GA+ W NL L G S
Sbjct: 141 QIAWQTAVAGEALSRPVVSDGVVLIHTSNGMLQALNESDGAIKWTLNLDTPALSLRGESA 200
Query: 85 TGIVVNVTVA-----VVVAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLE 139
+ + V AV G+L+W +I SQ+T G + ++
Sbjct: 201 PAVAFGAALVGGDNGRVSAVMMEQGQLIWQQRI-----SQVT------------GTTEID 243
Query: 140 EALPADQ----------CCTFRGSLAKLDVRNGRIIWQTYM 170
D + G+L LD+R+G+I+W+ M
Sbjct: 244 RLNDVDTTPVVVDGVVYALAYNGNLTALDLRSGQILWKREM 284
Score = 41.2 bits (95), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 87/222 (39%), Gaps = 25/222 (11%)
Query: 44 PAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTGL---------------SGTGIV 88
PA V+ G + A++A G IW+ +LS+ T SG+ +
Sbjct: 65 PAWQGNTVFAADRKGLVKAMDADTGKQIWQTDLSEKTNFLSSNRSAMLSGGVTASGSHVY 124
Query: 89 VNVTVAVVVAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVG-LSSLEEALPADQC 147
V A+V A++ +G++ W T + S+ +S V + G L +L E+ A +
Sbjct: 125 VGSEKAIVYALNTDDGQIAWQTAVAGEALSRPVVSDGVVLIHTSNGMLQALNESDGAIKW 184
Query: 148 CTFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYS------GAAVWGS--SPAIDVIRRQ 199
T L +R + GG G S G +W S
Sbjct: 185 -TLNLDTPALSLRGESAPAVAFGAALVGGDNGRVSAVMMEQGQLIWQQRISQVTGTTEID 243
Query: 200 KQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLG 241
+ N+ T P D + + Y ++ ALD+ SG+I W + +G
Sbjct: 244 RLNDVDTTPVVVDGVVYALAYNGNLTALDLRSGQILWKREMG 285
>gi|429081713|ref|ZP_19144813.1| Outer membrane protein YfgL, lipoprotein component of the protein
assembly complex (forms a complex with YaeT, YfiO, and
NlpB) [Cronobacter condimenti 1330]
gi|426549605|emb|CCJ70854.1| Outer membrane protein YfgL, lipoprotein component of the protein
assembly complex (forms a complex with YaeT, YfiO, and
NlpB) [Cronobacter condimenti 1330]
Length = 393
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 95/244 (38%), Gaps = 59/244 (24%)
Query: 44 PAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTGL---------------SGTGIV 88
PA +G VY G + AVN+ +G +W +LS+ TG G +
Sbjct: 65 PAFLDGNVYAADRRGTVKAVNSQDGKEVWSVDLSEKTGFFSRNRPALLSGGVTAVGAHVY 124
Query: 89 VNVTVAVVVAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCC 148
V A V A++ S+G + W T++ S+ +S + +
Sbjct: 125 VGSEKAQVYALNTSDGSIAWQTKVAGEALSRPVVSDGLVL------------------IH 166
Query: 149 TFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYSGAAVWGSS---------PAIDVIRR- 198
T G L L+ +G I W + + RG + A+ +G++ AI + R
Sbjct: 167 TSNGMLQALNESDGAIKWTVNLDMPSLSLRGESAPASAFGAAIVGGDNGRVSAILMQRGQ 226
Query: 199 ---QKQNNQTTKPTHPDQCISSDI-------------YANSIVALDIDSGRIAWAKPLGG 242
Q++ +Q T T D+ D Y ++ ALD+ SG+I W + LG
Sbjct: 227 MIWQQRISQATGATEIDRLSDVDTTPVIVNGVVYALAYNGNLTALDLRSGQIMWKRELGS 286
Query: 243 YDIF 246
+ F
Sbjct: 287 VNDF 290
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 64/155 (41%), Gaps = 26/155 (16%)
Query: 30 LRWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLS----KLTGLSGT 85
+ W + + P V++G+V + NG L A+N +GA+ W NL L G S
Sbjct: 142 IAWQTKVAGEALSRPVVSDGLVLIHTSNGMLQALNESDGAIKWTVNLDMPSLSLRGESAP 201
Query: 86 GIVVNVTVA-----VVVAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEE 140
+ V A+ G+++W +I SQ T GA + S +
Sbjct: 202 ASAFGAAIVGGDNGRVSAILMQRGQMIWQQRI-----SQAT-------GATEIDRLSDVD 249
Query: 141 ALPAD-----QCCTFRGSLAKLDVRNGRIIWQTYM 170
P + G+L LD+R+G+I+W+ +
Sbjct: 250 TTPVIVNGVVYALAYNGNLTALDLRSGQIMWKREL 284
Score = 38.9 bits (89), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 61/132 (46%), Gaps = 21/132 (15%)
Query: 39 DISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG--LSGTGIVVNVTVAVV 96
D+ TP + NGVVY ++NG L A++ +G ++W++ L + + G I + V
Sbjct: 247 DVDTTPVIVNGVVYALAYNGNLTALDLRSGQIMWKRELGSVNDFIVDGGRIYLVDQSDNV 306
Query: 97 VAVSRSNGELVWS-TQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLA 155
+A++ G +W+ TQ+ R + + Y G+ VG S G L
Sbjct: 307 LALNVEGGVTLWTQTQLLHRNLTAPVL----YNGSLVVGDS--------------EGYLH 348
Query: 156 KLDVRNGRIIWQ 167
+D NGR + Q
Sbjct: 349 WMDTDNGRFVAQ 360
>gi|167041652|gb|ABZ06398.1| putative PQQ enzyme repeat protein [uncultured marine microorganism
HF4000_009G21]
Length = 678
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 44/91 (48%), Gaps = 18/91 (19%)
Query: 218 DIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTI 277
++Y S++ALD+ +G AW L +DI+ F D AP+LL +
Sbjct: 320 NLYGTSLIALDVRTGERAWHYQLVHHDIWNF------------------DTPTAPILLDV 361
Query: 278 STNGRFRDVVVAVQKSGFAWAFDRDSGDIIW 308
T+ +VV K G + F+R++G+ IW
Sbjct: 362 MTDQGPTAIVVQPTKQGLVYTFNRETGEPIW 392
>gi|374990844|ref|YP_004966339.1| serine/threonine protein kinase, partial [Streptomyces
bingchenggensis BCW-1]
gi|297161496|gb|ADI11208.1| serine/threonine protein kinase [Streptomyces bingchenggensis
BCW-1]
Length = 731
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 46/91 (50%), Gaps = 11/91 (12%)
Query: 32 WSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLS------KLTGLSGT 85
W F AG +I ++P VA+G VYF S +G LYAV++ +G +W + + +G
Sbjct: 568 WEFKAGSEIVSSPVVADGTVYFGSKDGTLYAVDSDSGREVWRRGFDGKLWDPAVANGAGA 627
Query: 86 GIVVNVTV-----AVVVAVSRSNGELVWSTQ 111
IV + V V A + NG+ +W +
Sbjct: 628 PIVADGVVYFENDGYVCAFTADNGKPLWRQK 658
>gi|298483691|ref|ZP_07001865.1| cell surface protein [Bacteroides sp. D22]
gi|295087581|emb|CBK69104.1| FOG: WD40-like repeat [Bacteroides xylanisolvens XB1A]
gi|298270108|gb|EFI11695.1| cell surface protein [Bacteroides sp. D22]
Length = 654
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 91/221 (41%), Gaps = 45/221 (20%)
Query: 51 VYFPSWN--GYLYAVNAFNGALIWEQNLSKLTGLSGTGI---------VVNVTVAVVVAV 99
+Y P+ G+L+A++ +G W +S++T G + V N T+ V A+
Sbjct: 321 MYIPTSTPAGHLFAIDVVSGEFKWVFAISQITYGGGALVASDGTIYQCVRNATINNVYAI 380
Query: 100 SRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPAD---QCCTFRGSLAK 156
+ NG W+ ++D +GAF AL D C T + +L
Sbjct: 381 N-PNGTQKWAVKLDAA------------VGAF--------PALSVDGVLYCLTNKSTLYA 419
Query: 157 LDVRNGRIIWQTYM--------LPDNGGKRGGYSGAAVWGSSPAIDVIRRQKQNNQTTKP 208
LD +G I WQ + D G + AA++ P D I + ++ N T +
Sbjct: 420 LDASSGVIKWQQSLDGATGSAVAIDKAGNVYAGTSAAIYAFKPNKDQIWKLEEVNVTEQA 479
Query: 209 TH--PDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFY 247
T DQ + + + +VA+D+ +G W P D ++
Sbjct: 480 TFALKDQMLYATLKGGGLVAVDMTNGTKKWTYPTTKGDAYF 520
>gi|381395632|ref|ZP_09921328.1| alcohol dehydrogenase [cytochrome c] [Glaciecola punicea DSM 14233
= ACAM 611]
gi|379328712|dbj|GAB56461.1| alcohol dehydrogenase [cytochrome c] [Glaciecola punicea DSM 14233
= ACAM 611]
Length = 708
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 81/355 (22%), Positives = 127/355 (35%), Gaps = 79/355 (22%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSF--YAGKDISATPAVANGVVYFPSWNG 58
W HG D R++ I+ V L L WS+ + + + ATP V +GV+Y S
Sbjct: 45 WTMHGLDEEETRFSKLS-QIDASNVDRLGLAWSYDLESTRSVQATPIVKDGVMYVTSSWS 103
Query: 59 YLYAVNAFNGALIWEQNLSKLTGLSGTGI--VVNVTVA-------------VVVAVSRSN 103
L+AV+A G +W + + G VVN VA + A+ +
Sbjct: 104 ILHAVDAITGKRLWVYDPEVPGDYASKGCCGVVNRGVAYHDGKIFLGAFDGYLHALDAKS 163
Query: 104 GELVWSTQ-IDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTF--RGSLAKLDVR 160
G L+W ++ R T++G+ + A ++ + + F RG + +V
Sbjct: 164 GALIWKQDTLERRGEFSYTITGAPRIVAG-------DKVIIGNGGAEFGVRGYVTAYNVD 216
Query: 161 NGRIIWQTYMLPDNGGK----------------RGGY----SGAAVWGSSP--------A 192
G W+ Y +P + K G Y G VW S
Sbjct: 217 TGEQQWRWYTVPGDPSKPFENEAMEMAAKTWDPSGKYWKVGGGGTVWDSMAYDSDLNLLY 276
Query: 193 IDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLV 252
I V N P+ D +++ SIVAL+ D+G W
Sbjct: 277 IGVGNGSPWNRDFRSPSGGD-----NLFLASIVALNPDTGEYVW---------------- 315
Query: 253 PNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
+ PG D + L + G R V + K+GF + DR +G I
Sbjct: 316 --HYQGTPGDTWDYTHTQQITLADLVIKGELRKVAMQAPKNGFFYVIDRVTGAFI 368
>gi|386002047|ref|YP_005920346.1| Pyrrolo-quinoline quinone [Methanosaeta harundinacea 6Ac]
gi|357210103|gb|AET64723.1| Pyrrolo-quinoline quinone [Methanosaeta harundinacea 6Ac]
Length = 408
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 52/230 (22%), Positives = 83/230 (36%), Gaps = 57/230 (24%)
Query: 29 RLRWSFYAGKDISATPAVANGVVYFPSWN----GYLYAVNAFNGALIWEQNLSKLTGLSG 84
R W+F +TPA+A+G V F +W G +Y + G+ IW ++ G
Sbjct: 189 REIWNFTVEGAAQSTPAIADGRVVFGAWEWGLGGKIYCADLEEGSEIW--SIQTENSPCG 246
Query: 85 TGIVVNVTVAV----------VVAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVG 134
+ V + TV + ++A+S S+G L+W +I P + G VY+ G
Sbjct: 247 SAAVHDGTVYMTTYNFNGNGDLLALSLSDGSLLWRREISPTDSTPTLAEGKVYVCGGVEG 306
Query: 135 LSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNGGKRG--GYSGAAVWGSSPA 192
SS + G ++W+T G R Y+ V+ P
Sbjct: 307 FSS--------------SKTYAFEAATGELVWETDEAEKIGDWRCSMAYADGLVFVGRPD 352
Query: 193 IDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGG 242
D VALD +G++ W+ P GG
Sbjct: 353 FDDF-------------------------GGTVALDAATGKVVWSHPGGG 377
>gi|402771928|ref|YP_006591465.1| PQQ-dependent dehydrogenase [Methylocystis sp. SC2]
gi|401773948|emb|CCJ06814.1| PQQ-dependent dehydrogenase, methanol/ethanol family [Methylocystis
sp. SC2]
Length = 613
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 79/361 (21%), Positives = 138/361 (38%), Gaps = 88/361 (24%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRN---LRLRWSFYAG--KDISATPAVANGVVY--- 52
W+ GD N R++ + +T N L W F G + P V V+Y
Sbjct: 45 WVMPTGDYANLRHS----ALKQITTENVGKLAPAWQFSTGVLRGHEGAPLVIGDVMYLHT 100
Query: 53 -FPSWNGYLYAVNAFNGALIWE----QNLSKL---------TGLS-GTG-IVVNVTVAVV 96
FP+ N Y + + ++W+ Q+ S + GL+ G G I + +
Sbjct: 101 PFPN-NVYALDLKDPDHKILWKYEPKQDPSVVPVMCCDTVNRGLAYGDGKIFLAQADTTL 159
Query: 97 VAVSRSNGELVWSTQI-DPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLA 155
VA+ G+L+WS + DP T + V+ +VG++ E + RG +
Sbjct: 160 VALDAKTGKLLWSVKNGDPSKGQTSTAAPHVFKDKVFVGIAGGEFGV--------RGHIT 211
Query: 156 KLDVRNGRIIWQTY-MLPDNG-------------------------GKRGGYSGAAVWG- 188
DV+ G+ +W+ Y M PD G + G WG
Sbjct: 212 AYDVKTGQQVWRGYSMGPDADTLIEPGKTTHLGKPVEKDSGITTWEGDQWKIGGGTTWGW 271
Query: 189 --SSPAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIF 246
P ++++ N T +P Q + ++ +I A D+D+G++ W ++
Sbjct: 272 YSYDPDLNLVYYGSGNPSTW---NPKQRPGDNRWSMTIWARDLDTGKVKW--------VY 320
Query: 247 YFTCLVPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDI 306
T P D D +L G+ R +V ++GFA+ DR +G++
Sbjct: 321 QMT----------PHDEWDYDGINEMILADQDMGGQKRKTLVHFDRNGFAYTLDRATGEL 370
Query: 307 I 307
+
Sbjct: 371 L 371
>gi|150014706|gb|ABR57227.1| PedH [Pseudomonas putida]
Length = 595
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 66/334 (19%), Positives = 123/334 (36%), Gaps = 74/334 (22%)
Query: 19 LINPVTVRNLRLRWSFYAG----KDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQ 74
L+N V+ LR W+F G + A P + +GV+Y ++AV+A G +W+
Sbjct: 61 LLNANNVKELRPVWAFSFGGEKQRGQQAQPLIKDGVMYLTGSYSRVFAVDARTGKKLWQY 120
Query: 75 N-------------LSKLTGLSGTGIVVNVTVAVVVAVSRSNGELVWSTQI-DPRPRSQI 120
+ +++ L G + A +VA+++ G++VWS ++ D + I
Sbjct: 121 DARLPDDIRPCCDVINRGVALYGDLVFFGTLDAKLVALNKDTGKVVWSKKVADHKEGYSI 180
Query: 121 TMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQT--------YMLP 172
+ + + G G++ E + G + + NG ++W Y+
Sbjct: 181 SAAPMIVNGKLITGVAGGEFGV--------VGKIQAYNPENGELLWMRPTVEGHMGYVYK 232
Query: 173 DNGGKRGGYSGAA--------VW---GSSPAIDVIRRQKQN-----NQTTKPTHPDQCIS 216
D G SG +W G++P + + N P +
Sbjct: 233 DGKAIENGISGGEAGKTWPGDLWKTGGAAPWLGGYYDPETNLILFGTGNPAPWNSHLRPG 292
Query: 217 SDIYANSIVALDIDSGRIAW---AKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPM 273
++Y++S +AL+ D G I W + P G+D L+ N
Sbjct: 293 DNLYSSSRLALNPDDGTIKWHFQSTPHDGWDFDGVNELISFN------------------ 334
Query: 274 LLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
G+ ++GF + DR +G I
Sbjct: 335 ---YKDGGKEVKAAATADRNGFFYVLDRTNGKFI 365
>gi|410649022|ref|ZP_11359416.1| alcohol dehydrogenase [cytochrome c] [Glaciecola agarilytica NO2]
gi|410131376|dbj|GAC07815.1| alcohol dehydrogenase [cytochrome c] [Glaciecola agarilytica NO2]
Length = 579
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 77/314 (24%), Positives = 121/314 (38%), Gaps = 59/314 (18%)
Query: 20 INPVTVRNLRLRWSFYAGKD--ISATPAVANGVVYFPSWNGYLYAVNAFNGALIWE---- 73
IN V L W++ D A + NGV++ + + A+NA G L W
Sbjct: 55 INSKNVSKLTPVWTYSTNLDSGHEAPAQINNGVMFVSTPYNNVIALNAKTGQLYWRYKHD 114
Query: 74 --------QNLSKLTGLSGTGIVVNVTVAVVVAVSRSNGELVWSTQI-DPRPRSQITMSG 124
N S+ L G + V + A+ + GE + +QI D + IT +
Sbjct: 115 NPYDLSVMHNTSRGVALWGDKVYVAGLDGTLNALDAATGERLCQSQIGDWSIGAYITSAP 174
Query: 125 SVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNG--------- 175
+ G VG S E + RG L +D W+TY +P G
Sbjct: 175 TPVKGKILVGPSGGEYGV--------RGFLEAMDAETCETAWKTYSVPGPGEAGHETWKK 226
Query: 176 -GKRGG---YSGAAVW--GSSPAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDI 229
GKR Y G ++W G+ A + I N + P DQ ++Y S +A+D
Sbjct: 227 EGKRPDAWKYGGGSMWMPGNYDADEDILYWGVGNGS--PWLGDQRPGDNLYVASSIAMDP 284
Query: 230 DSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTISTNGRFR-DVVV 288
D+G+I G Y Y + D APML+ +G + +V
Sbjct: 285 DTGKIK-----GHYQYHY-------------NDSWDWAAMNAPMLIDGLKDGEKKVKGLV 326
Query: 289 AVQKSGFAWAFDRD 302
+ Q++G+ + +RD
Sbjct: 327 SPQRNGYMYWLERD 340
>gi|435848240|ref|YP_007310490.1| hypothetical protein Natoc_2945 [Natronococcus occultus SP4]
gi|433674508|gb|AGB38700.1| hypothetical protein Natoc_2945 [Natronococcus occultus SP4]
Length = 407
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 62/129 (48%), Gaps = 19/129 (14%)
Query: 39 DISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTGLSGTGIVVNVTVAVVVA 98
D + AVA+GVVY + +G + A++A +G +WE + + + G V + VVA
Sbjct: 82 DHDGSVAVADGVVYATTEDGVV-ALDAADGEPVWETDAVAASDPAVAGDGVYLCGEEVVA 140
Query: 99 VSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLD 158
+ RS+G + W + ++P ++ T S +V YV GSL LD
Sbjct: 141 LDRSDGNVRWESSLEP---TEWTSSHTVAHDGVYV---------------VADGSLYALD 182
Query: 159 VRNGRIIWQ 167
+ +G + W+
Sbjct: 183 IEDGSVRWR 191
>gi|429105676|ref|ZP_19167545.1| Outer membrane protein YfgL, lipoprotein component of the protein
assembly complex (forms a complex with YaeT, YfiO, and
NlpB) [Cronobacter malonaticus 681]
gi|426292399|emb|CCJ93658.1| Outer membrane protein YfgL, lipoprotein component of the protein
assembly complex (forms a complex with YaeT, YfiO, and
NlpB) [Cronobacter malonaticus 681]
Length = 393
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 101/244 (41%), Gaps = 59/244 (24%)
Query: 44 PAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG---------LSG--TGIVVNVT 92
PA +G VY G + AVN+ +G IW +LS+ TG LSG T + +V
Sbjct: 65 PAFLDGNVYAADRRGTVKAVNSQDGKEIWSIDLSEKTGFFSRNRPALLSGGLTAVGAHVY 124
Query: 93 V----AVVVAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCC 148
V A V A++ S+G + W T++ S+ +S + +
Sbjct: 125 VGSEKAQVYALNTSDGSIAWQTKVAGEALSRPVVSDGLVL------------------IH 166
Query: 149 TFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYSGAAVWGSS--------PAIDVIRR-- 198
T G L L+ +G I W + + RG + A+ +G++ + +++R
Sbjct: 167 TSNGMLQALNESDGAIKWTVNLDMPSLSLRGESAPASAFGAAIVGGDNGRVSAVLMQRGQ 226
Query: 199 ---QKQNNQTTKPTHPDQCISSDI-------------YANSIVALDIDSGRIAWAKPLGG 242
Q++ +Q T T D+ D Y ++ ALD+ SG+I W + LG
Sbjct: 227 MIWQQRISQATGATEIDRLSDVDTTPVVVNGVVYALAYNGNLTALDLRSGQIMWKRELGS 286
Query: 243 YDIF 246
+ F
Sbjct: 287 VNDF 290
Score = 41.6 bits (96), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 62/157 (39%), Gaps = 30/157 (19%)
Query: 30 LRWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLS----KLTGLSGT 85
+ W + + P V++G+V + NG L A+N +GA+ W NL L G S
Sbjct: 142 IAWQTKVAGEALSRPVVSDGLVLIHTSNGMLQALNESDGAIKWTVNLDMPSLSLRGESAP 201
Query: 86 GIVVNVTVA-----VVVAVSRSNGELVWSTQI-------DPRPRSQITMSGSVYMGAFYV 133
+ V AV G+++W +I + S + + V G Y
Sbjct: 202 ASAFGAAIVGGDNGRVSAVLMQRGQMIWQQRISQATGATEIDRLSDVDTTPVVVNGVVY- 260
Query: 134 GLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYM 170
+ G+L LD+R+G+I+W+ +
Sbjct: 261 -------------ALAYNGNLTALDLRSGQIMWKREL 284
Score = 39.7 bits (91), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 61/132 (46%), Gaps = 21/132 (15%)
Query: 39 DISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG--LSGTGIVVNVTVAVV 96
D+ TP V NGVVY ++NG L A++ +G ++W++ L + + G I + V
Sbjct: 247 DVDTTPVVVNGVVYALAYNGNLTALDLRSGQIMWKRELGSVNDFIVDGGRIYLVDQSDNV 306
Query: 97 VAVSRSNGELVWS-TQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLA 155
+A++ G +W+ TQ+ R + + Y G+ VG S G L
Sbjct: 307 LALNVEGGVTLWTQTQLLHRNLTAPVL----YNGSLVVGDS--------------EGYLH 348
Query: 156 KLDVRNGRIIWQ 167
+D NGR + Q
Sbjct: 349 WMDTDNGRFVAQ 360
>gi|167034121|ref|YP_001669352.1| methanol/ethanol family PQQ-dependent dehydrogenase [Pseudomonas
putida GB-1]
gi|166860609|gb|ABY99016.1| PQQ-dependent dehydrogenase, methanol/ethanol family [Pseudomonas
putida GB-1]
Length = 595
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 66/334 (19%), Positives = 123/334 (36%), Gaps = 74/334 (22%)
Query: 19 LINPVTVRNLRLRWSFYAG----KDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQ 74
L+N V+ LR W+F G + A P + +GV+Y ++AV+A G +W+
Sbjct: 61 LLNANNVKELRPVWAFSFGGEKQRGQQAQPLIKDGVMYLTGSYSRVFAVDARTGKKLWQY 120
Query: 75 N-------------LSKLTGLSGTGIVVNVTVAVVVAVSRSNGELVWSTQI-DPRPRSQI 120
+ +++ L G + A +VA+++ G++VWS ++ D + I
Sbjct: 121 DARLPDDIRPCCDVINRGVALYGDLVFFGTLDAKLVALNKDTGKVVWSKKVADHKEGYSI 180
Query: 121 TMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQT--------YMLP 172
+ + + G G++ E + G + + NG ++W Y+
Sbjct: 181 SAAPMIVNGKLITGVAGGEFGV--------VGKIQAYNPENGELLWMRPTVEGHMGYVYK 232
Query: 173 DNGGKRGGYSGAA--------VW---GSSPAIDVIRRQKQN-----NQTTKPTHPDQCIS 216
D G SG +W G++P + + N P +
Sbjct: 233 DGKAIENGISGGEAGKTWPGDLWKTGGAAPWLGGYYDPETNLILFGTGNPAPWNSHLRPG 292
Query: 217 SDIYANSIVALDIDSGRIAW---AKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPM 273
++Y++S +AL+ D G I W + P G+D L+ N
Sbjct: 293 DNLYSSSRLALNPDDGTIKWHFQSTPHDGWDFDGVNELISFN------------------ 334
Query: 274 LLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
G+ ++GF + DR +G I
Sbjct: 335 ---YKDGGKEVKAAATADRNGFFYVLDRTNGKFI 365
>gi|424666008|ref|ZP_18103044.1| hypothetical protein HMPREF1205_01883 [Bacteroides fragilis HMW
616]
gi|404574261|gb|EKA79012.1| hypothetical protein HMPREF1205_01883 [Bacteroides fragilis HMW
616]
Length = 623
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 66/297 (22%), Positives = 116/297 (39%), Gaps = 47/297 (15%)
Query: 24 TVRNLRLRWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIW-----EQNLSK 78
T+++ + W+F +GK I TP VA+GVV F S + +Y ++A G W E L
Sbjct: 324 TLKSGQKLWNFQSGKRIVGTPDVADGVVVFGSADHNIYGLDARTGKERWRVTAGEPVLGA 383
Query: 79 LTGLSGTGIVVNVTVAVVVAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSL 138
+T G + + + A+ +G+++WS Y G+
Sbjct: 384 VTIEKGVA-YIGASDSTFRAIHIKSGKVLWS----------------------YAGIKGY 420
Query: 139 EEALPADQ-----CCTFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYSGAAVWGSSPAI 193
E P + + +L LD NG+ +W+ G R +S AAVW +
Sbjct: 421 VETKPLIEGNKVIFGAWDNTLYALDKTNGKELWKW----TGGLTRMHFSPAAVWPVAAHG 476
Query: 194 DVIRRQKQNNQTTKPTHPDQCI--SSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCL 251
V Q T + + + + L D RI ++K + + Y T
Sbjct: 477 KVFITDPQRAMTAINLETGETVWRTFQSMVRETIGLSADKKRI-YSKTMNDSVVCYST-- 533
Query: 252 VPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDIIW 308
+ + P N+ + AP + + +G VV + K G +A + +G ++W
Sbjct: 534 IGDVPKKLWASNVGFGYEHAPS-MQMEKDG----VVFSSTKEGLIFALEASTGQVLW 585
>gi|348571883|ref|XP_003471724.1| PREDICTED: acyl-CoA synthetase family member 4-like [Cavia
porcellus]
Length = 1088
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 57/120 (47%), Gaps = 16/120 (13%)
Query: 27 NLRLRWSFYAGKDISATPAV-------ANGVVYFPSWNGYLYAVNAFNGALIWEQNL--- 76
LR+RW GK + A+P V ++ VY S +G + AV+ +G + WEQ L
Sbjct: 745 ELRVRWRSDTGKCVDASPLVVIPAADNSSATVYIGSHSGRMKAVDLCSGKVKWEQILGDR 804
Query: 77 ---SKLTGLSGTGIVVNVTVAVVVAVSRSNGELVWSTQIDPRPRSQITM---SGSVYMGA 130
S + G I+V +V + ++GE+ W + +S TM +G +Y+G+
Sbjct: 805 IESSACVSVCGNFIIVGCYNGLVYVLKSNSGEMYWMFTTEDTVKSSATMDPTTGLIYIGS 864
>gi|393725414|ref|ZP_10345341.1| pyrrolo-quinoline quinone repeat-containing protein [Sphingomonas
sp. PAMC 26605]
Length = 455
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 60/126 (47%), Gaps = 3/126 (2%)
Query: 6 GDLNNRRYAYGEVLINPVTVRNLRLRWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNA 65
G+LN RY G L R+ + S + D+ A P + G+VY G + A+
Sbjct: 260 GELNAYRYENGRTLWQDALSRST-ISTSVSSLADVDADPVIDRGIVYAVGQGGRMVAIEI 318
Query: 66 FNGALIWEQNLSKLTG--LSGTGIVVNVTVAVVVAVSRSNGELVWSTQIDPRPRSQITMS 123
+G +WEQN + ++ ++G + + A +V ++R+ G++ W +Q+ +
Sbjct: 319 DSGQRLWEQNFAGISTPWVAGEWVFIVTDDARLVCLARATGKVRWISQLRHYMSEKTKKD 378
Query: 124 GSVYMG 129
G++ G
Sbjct: 379 GTLKEG 384
>gi|217978999|ref|YP_002363146.1| Pyrrolo-quinoline quinone [Methylocella silvestris BL2]
gi|217504375|gb|ACK51784.1| Pyrrolo-quinoline quinone [Methylocella silvestris BL2]
Length = 614
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 87/393 (22%), Positives = 137/393 (34%), Gaps = 106/393 (26%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAGK--DISATPAVANGVVYFPSWNG 58
WL +G +N R++ IN V+ L +W + GK ATP V++GV+Y
Sbjct: 49 WLTNGRSFSNLRFSPLSE-INTANVQTLVPKWIYQTGKAATFQATPLVSDGVIYLSEPFS 107
Query: 59 YLYAVNAFNGALIW--EQNL--SKLT------GLS-GTGIVVNVTV-AVVVAVSRSNGEL 106
+ A++A G IW E L KL G++ G G V TV A ++A+ +GE+
Sbjct: 108 SVSAIDARTGEKIWRYEHKLPAQKLCCGPANRGVALGEGKVFVATVDARLIALDAKSGEI 167
Query: 107 VWS---------TQIDPRPRSQITMSGS----------------VYMGAFYVGLS----- 136
VW+ T D + I +GS Y G ++G++
Sbjct: 168 VWNVLLAAPDAGTAEDKAALANIAGAGSRAATGQSGVGANSAPLYYDGKVFIGVTGVGYG 227
Query: 137 -SLEEALPADQCCTF---------RGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYSGAAV 186
LE P T G LA D G IWQ G G +
Sbjct: 228 LHLESERPGAPLGTVVGLAGKYGSSGFLAAFDAATGDRIWQ--FDSTQAGWEGDFVEKTA 285
Query: 187 WGSSPAIDVIRRQKQNNQ-------------TTKPTHP------------------DQCI 215
+G D+ R + Q T P D
Sbjct: 286 YGVPLPRDISREKADMAQFPDAWRTGGGTVWHTPALDPALGLLYFGIGNPSPQATGDGRP 345
Query: 216 SSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLL 275
++Y S+VA+D+++G++ W +D++ + D P L
Sbjct: 346 GDNLYTVSLVAVDVETGKLRWHFQQVPHDLWGY------------------DVASPPSLF 387
Query: 276 TISTNGRFRDVVVAVQKSGFAWAFDRDSGDIIW 308
+ G+ V K G+ + DR G ++
Sbjct: 388 DVEIGGKIIPAVGQASKLGWYFVNDRRDGKFLF 420
>gi|156932945|ref|YP_001436861.1| outer membrane protein assembly complex subunit YfgL [Cronobacter
sakazakii ATCC BAA-894]
gi|424800629|ref|ZP_18226171.1| Outer membrane protein YfgL, lipoprotein component of the protein
assembly complex (forms a complex with YaeT, YfiO, and
NlpB) [Cronobacter sakazakii 696]
gi|429121148|ref|ZP_19181794.1| Outer membrane protein YfgL, lipoprotein component of the protein
assembly complex (forms a complex with YaeT, YfiO, and
NlpB) [Cronobacter sakazakii 680]
gi|156531199|gb|ABU76025.1| hypothetical protein ESA_00748 [Cronobacter sakazakii ATCC BAA-894]
gi|423236350|emb|CCK08041.1| Outer membrane protein YfgL, lipoprotein component of the protein
assembly complex (forms a complex with YaeT, YfiO, and
NlpB) [Cronobacter sakazakii 696]
gi|426324432|emb|CCK12531.1| Outer membrane protein YfgL, lipoprotein component of the protein
assembly complex (forms a complex with YaeT, YfiO, and
NlpB) [Cronobacter sakazakii 680]
Length = 393
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 96/244 (39%), Gaps = 59/244 (24%)
Query: 44 PAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTGL---------------SGTGIV 88
PA +G VY G + AVN+ +G IW +LS+ TG G +
Sbjct: 65 PAFLDGNVYAADRRGTVKAVNSQDGKEIWSIDLSEKTGFFSRNRPALLSGGLTAVGAHVY 124
Query: 89 VNVTVAVVVAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCC 148
V A V A++ S+G + W T++ S+ +S + +
Sbjct: 125 VGSEKAQVYALNTSDGSIAWQTKVAGEALSRPVVSDGLVL------------------IH 166
Query: 149 TFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYSGAAVWGSS--------PAIDVIRR-- 198
T G L L+ +G I W + + RG + A+ +G++ + +++R
Sbjct: 167 TSNGMLQALNESDGAIKWTVNLDMPSLSLRGESAPASAFGAAIVGGDNGRVSAVLMQRGQ 226
Query: 199 ---QKQNNQTTKPTHPDQCISSDI-------------YANSIVALDIDSGRIAWAKPLGG 242
Q++ +Q T T D+ D Y ++ ALD+ SG+I W + LG
Sbjct: 227 MIWQQRISQATGATEIDRLSDVDTTPVVVNGVVYALAYNGNLTALDLRSGQIMWKRELGS 286
Query: 243 YDIF 246
+ F
Sbjct: 287 VNDF 290
Score = 41.6 bits (96), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 62/157 (39%), Gaps = 30/157 (19%)
Query: 30 LRWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLS----KLTGLSGT 85
+ W + + P V++G+V + NG L A+N +GA+ W NL L G S
Sbjct: 142 IAWQTKVAGEALSRPVVSDGLVLIHTSNGMLQALNESDGAIKWTVNLDMPSLSLRGESAP 201
Query: 86 GIVVNVTVA-----VVVAVSRSNGELVWSTQI-------DPRPRSQITMSGSVYMGAFYV 133
+ V AV G+++W +I + S + + V G Y
Sbjct: 202 ASAFGAAIVGGDNGRVSAVLMQRGQMIWQQRISQATGATEIDRLSDVDTTPVVVNGVVY- 260
Query: 134 GLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYM 170
+ G+L LD+R+G+I+W+ +
Sbjct: 261 -------------ALAYNGNLTALDLRSGQIMWKREL 284
Score = 39.3 bits (90), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 61/132 (46%), Gaps = 21/132 (15%)
Query: 39 DISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG--LSGTGIVVNVTVAVV 96
D+ TP V NGVVY ++NG L A++ +G ++W++ L + + G I + V
Sbjct: 247 DVDTTPVVVNGVVYALAYNGNLTALDLRSGQIMWKRELGSVNDFIVDGGRIYLVDQNDNV 306
Query: 97 VAVSRSNGELVWS-TQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLA 155
+A++ G +W+ TQ+ R + + Y G+ VG S G L
Sbjct: 307 LALNVEGGVTLWTQTQLLHRNLTAPVL----YNGSLVVGDS--------------EGYLH 348
Query: 156 KLDVRNGRIIWQ 167
+D NGR + Q
Sbjct: 349 WMDTDNGRFVAQ 360
>gi|410862887|ref|YP_006978121.1| methanol/ethanol family PQQ-dependent dehydrogenase [Alteromonas
macleodii AltDE1]
gi|410820149|gb|AFV86766.1| methanol/ethanol family PQQ-dependent dehydrogenase [Alteromonas
macleodii AltDE1]
Length = 595
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 71/348 (20%), Positives = 129/348 (37%), Gaps = 69/348 (19%)
Query: 2 LNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAG----KDISATPAVANGVVYFPSWN 57
+ +G L +RY+ IN TV +R W+F G + + P V +GV+Y
Sbjct: 44 VTYGMGLKAQRYS-PLTAINRDTVEEVRPVWAFSLGGEKQRGQESQPMVKDGVMYVTGSY 102
Query: 58 GYLYAVNAFNGALIWEQNLSKLTGLSGTGIVVNVTVAV-------------VVAVSRSNG 104
++A++A G +W+ G+ V+N VA+ +VA+ + G
Sbjct: 103 SRVWAIDARTGEELWQYEARLPDGIMPCCDVINRGVALYDNLVIFGTLDAKLVALDKDTG 162
Query: 105 ELVWSTQI-DPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGR 163
+ VW ++ D R IT + V G G+S E + G + D ++G+
Sbjct: 163 KTVWKKKVEDYRAGYAITAAPIVVDGKVITGISGGEFGI--------VGKVYAYDAKSGK 214
Query: 164 IIW--------QTYMLPDNGGKRGGYSGAA--------VWGSSPAIDVIRRQKQNNQ--- 204
+W Y+ D G SG A +W + A + ++
Sbjct: 215 QLWVRPTVEGHMGYLWKDGKKTENGISGGAPGKTWPADLWKTGGAATWLGGTYDSDTGLL 274
Query: 205 -----TTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCP 259
P + + +++S +A+D ++G+I W +F
Sbjct: 275 FFGTGNPAPWNSHLRPGDNYFSSSRLAIDPNTGKIVW----------HFQTT-------- 316
Query: 260 PGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
P D D + NG+ ++GF + +R++GD I
Sbjct: 317 PHDGWDFDGVNELISFDYQENGKTVKAAATADRNGFFYVLNRENGDFI 364
>gi|87200891|ref|YP_498148.1| Pyrrolo-quinoline quinone [Novosphingobium aromaticivorans DSM
12444]
gi|87136572|gb|ABD27314.1| Pyrrolo-quinoline quinone [Novosphingobium aromaticivorans DSM
12444]
Length = 727
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 75/350 (21%), Positives = 123/350 (35%), Gaps = 71/350 (20%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAG--KDISATPAVANGVVYFPSWNG 58
W GGD ++ IN V L L W G + ATP V +GV+Y G
Sbjct: 32 WPGPGGDAGKTHHSR-LTAINAENVGRLGLAWQVELGTLRGQEATPVVVDGVLYTSGTTG 90
Query: 59 YLYAVNAFNGALIW--EQNLSKLTGLSGTGIVVNVTVAV-------------VVAVSRSN 103
YA +A G +W E + + +VN VAV + A+
Sbjct: 91 RAYAFDAATGKELWRFEPEVDMQVNRTVCCDMVNRGVAVGRGKVFVASLDGWMYALDART 150
Query: 104 GELVWSTQ-IDPRPRSQITMSGSVYMG-AFYVGLSSLEEALPADQCCTFRGSLAKLDVRN 161
G +VW + I+ R + + G +G+ E RG + LD+
Sbjct: 151 GAVVWKSDFIENRAKGDNSTGAPEIAGDVVVIGMGGAE--------YDVRGYVTALDLDT 202
Query: 162 GRIIWQTYMLP--------------------DNGGKRGGYSGAAVWGS---SPAIDVIRR 198
G++ W+ +++P D + G + W + P ++
Sbjct: 203 GKLRWRWHVVPRDPKLGPQETPELEAALKTWDPNSRWDIGGGGSPWDAINYDPETGLVLV 262
Query: 199 QKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDC 258
N + ++Y S+VALD +GR+ W D + FT
Sbjct: 263 GTGNGGPYATSKRSPAGGDNLYLASLVALDPKTGRMKWHYQETPGDNWDFTA-------- 314
Query: 259 PPGPNLDADFGEAPMLLT-ISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
PM+ T + +G R VV+ K+G+ + DR G ++
Sbjct: 315 -----------TQPMIFTRMKIDGEDRPVVLHAPKNGYLYILDRRDGKLL 353
>gi|389840016|ref|YP_006342100.1| outer membrane protein assembly complex subunit YfgL [Cronobacter
sakazakii ES15]
gi|387850492|gb|AFJ98589.1| outer membrane protein assembly complex subunit YfgL [Cronobacter
sakazakii ES15]
Length = 393
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 96/244 (39%), Gaps = 59/244 (24%)
Query: 44 PAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTGL---------------SGTGIV 88
PA +G VY G + AVN+ +G IW +LS+ TG G +
Sbjct: 65 PAFLDGNVYAADRRGTVKAVNSQDGKEIWSIDLSEKTGFFSRNRPALLSGGLTAVGAHVY 124
Query: 89 VNVTVAVVVAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCC 148
V A V A++ S+G + W T++ S+ +S + +
Sbjct: 125 VGSEKAQVYALNTSDGSIAWQTKVAGEALSRPVVSDGLVL------------------IH 166
Query: 149 TFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYSGAAVWGSS--------PAIDVIRR-- 198
T G L L+ +G I W + + RG + A+ +G++ + +++R
Sbjct: 167 TSNGMLQALNESDGAIKWTVNLDMPSLSLRGESAPASAFGAAIVGGDNGRVSAVLMQRGQ 226
Query: 199 ---QKQNNQTTKPTHPDQCISSDI-------------YANSIVALDIDSGRIAWAKPLGG 242
Q++ +Q T T D+ D Y ++ ALD+ SG+I W + LG
Sbjct: 227 MIWQQRISQATGATEIDRLSDVDTTPVVVNGVVYALAYNGNLTALDLRSGQIMWKRELGS 286
Query: 243 YDIF 246
+ F
Sbjct: 287 VNDF 290
Score = 41.6 bits (96), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 64/155 (41%), Gaps = 26/155 (16%)
Query: 30 LRWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLS----KLTGLSGT 85
+ W + + P V++G+V + NG L A+N +GA+ W NL L G S
Sbjct: 142 IAWQTKVAGEALSRPVVSDGLVLIHTSNGMLQALNESDGAIKWTVNLDMPSLSLRGESAP 201
Query: 86 GIVVNVTVA-----VVVAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEE 140
+ V AV G+++W +I SQ T GA + S +
Sbjct: 202 ASAFGAAIVGGDNGRVSAVLMQRGQMIWQQRI-----SQAT-------GATEIDRLSDVD 249
Query: 141 ALP-----ADQCCTFRGSLAKLDVRNGRIIWQTYM 170
P + G+L LD+R+G+I+W+ +
Sbjct: 250 TTPVVVNGVVYALAYNGNLTALDLRSGQIMWKREL 284
Score = 39.3 bits (90), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 61/132 (46%), Gaps = 21/132 (15%)
Query: 39 DISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG--LSGTGIVVNVTVAVV 96
D+ TP V NGVVY ++NG L A++ +G ++W++ L + + G I + V
Sbjct: 247 DVDTTPVVVNGVVYALAYNGNLTALDLRSGQIMWKRELGSVNDFIVDGGRIYLVDQNDNV 306
Query: 97 VAVSRSNGELVWS-TQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLA 155
+A++ G +W+ TQ+ R + + Y G+ VG S G L
Sbjct: 307 LALNVEGGVTLWTQTQLLHRNLTAPVL----YNGSLVVGDS--------------EGYLH 348
Query: 156 KLDVRNGRIIWQ 167
+D NGR + Q
Sbjct: 349 WMDTDNGRFVAQ 360
>gi|448715257|ref|ZP_21702364.1| pyrrolo-quinoline quinone [Halobiforma nitratireducens JCM 10879]
gi|445787863|gb|EMA38596.1| pyrrolo-quinoline quinone [Halobiforma nitratireducens JCM 10879]
Length = 431
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 61/128 (47%), Gaps = 10/128 (7%)
Query: 31 RWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTGLSGTGIVVN 90
W+F G +S++PAV +GVVY S +G +YA+ A +G W G++ + VV+
Sbjct: 145 EWAFTTGDQVSSSPAVVDGVVYVGSTDGSVYAIEADSGDREW--TFETEGGVASSPAVVD 202
Query: 91 VTVAV------VVAVSRSNGELVWSTQIDPR-PRSQITMSGSVYMGAFYVGLSSLEEALP 143
V V V A+ +G+ W+ + R+ G+VY G+ L ++ EA
Sbjct: 203 GVVYVGSNDGSVYAIDADSGDREWAFETGGSVQRAPAVADGTVYAGSTDNHLYAI-EADS 261
Query: 144 ADQCCTFR 151
DQ F
Sbjct: 262 GDQEWAFE 269
Score = 41.6 bits (96), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 51/109 (46%), Gaps = 10/109 (9%)
Query: 31 RWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIW-----EQNLSKLTGLSGT 85
RW F + ++PAV +GVVY S +G LYA++A +G W +Q S + G
Sbjct: 105 RWEFETDGPVYSSPAVVDGVVYVGSNDGSLYAIDADSGDREWAFTTGDQVSSSPAVVDGV 164
Query: 86 GIVVNVTVAVVVAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVG 134
+ V T V A+ +G+ W+ + + S +V G YVG
Sbjct: 165 -VYVGSTDGSVYAIEADSGDREWTFET----EGGVASSPAVVDGVVYVG 208
>gi|429111260|ref|ZP_19173030.1| Outer membrane protein YfgL, lipoprotein component of the protein
assembly complex (forms a complex with YaeT, YfiO, and
NlpB) [Cronobacter malonaticus 507]
gi|426312417|emb|CCJ99143.1| Outer membrane protein YfgL, lipoprotein component of the protein
assembly complex (forms a complex with YaeT, YfiO, and
NlpB) [Cronobacter malonaticus 507]
Length = 393
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 96/244 (39%), Gaps = 59/244 (24%)
Query: 44 PAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTGL---------------SGTGIV 88
PA +G VY G + AVN+ +G IW +LS+ TG G +
Sbjct: 65 PAFLDGNVYAADRRGTVKAVNSQDGKEIWSIDLSEKTGFFSRNRPALLSGGLTAVGAHVY 124
Query: 89 VNVTVAVVVAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCC 148
V A V A++ S+G + W T++ S+ +S + +
Sbjct: 125 VGSEKAQVYALNTSDGSIAWQTKVAGEALSRPVVSDGLVL------------------IH 166
Query: 149 TFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYSGAAVWGSS--------PAIDVIRR-- 198
T G L L+ +G I W + + RG + A+ +G++ + +++R
Sbjct: 167 TSNGMLQALNESDGAIKWTVNLDMPSLSLRGESAPASAFGAAIVGGDNGRVSAVLMQRGQ 226
Query: 199 ---QKQNNQTTKPTHPDQCISSDI-------------YANSIVALDIDSGRIAWAKPLGG 242
Q++ +Q T T D+ D Y ++ ALD+ SG+I W + LG
Sbjct: 227 MIWQQRISQATGATEIDRLSDVDTTPVIVNGVVYALAYNGNLTALDLRSGQIMWKRELGS 286
Query: 243 YDIF 246
+ F
Sbjct: 287 VNDF 290
Score = 41.6 bits (96), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 64/155 (41%), Gaps = 26/155 (16%)
Query: 30 LRWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLS----KLTGLSGT 85
+ W + + P V++G+V + NG L A+N +GA+ W NL L G S
Sbjct: 142 IAWQTKVAGEALSRPVVSDGLVLIHTSNGMLQALNESDGAIKWTVNLDMPSLSLRGESAP 201
Query: 86 GIVVNVTVA-----VVVAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEE 140
+ V AV G+++W +I SQ T GA + S +
Sbjct: 202 ASAFGAAIVGGDNGRVSAVLMQRGQMIWQQRI-----SQAT-------GATEIDRLSDVD 249
Query: 141 ALPAD-----QCCTFRGSLAKLDVRNGRIIWQTYM 170
P + G+L LD+R+G+I+W+ +
Sbjct: 250 TTPVIVNGVVYALAYNGNLTALDLRSGQIMWKREL 284
Score = 39.3 bits (90), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 61/132 (46%), Gaps = 21/132 (15%)
Query: 39 DISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG--LSGTGIVVNVTVAVV 96
D+ TP + NGVVY ++NG L A++ +G ++W++ L + + G I + V
Sbjct: 247 DVDTTPVIVNGVVYALAYNGNLTALDLRSGQIMWKRELGSVNDFIVDGGRIYLVDQSDNV 306
Query: 97 VAVSRSNGELVWS-TQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLA 155
+A++ G +W+ TQ+ R + + Y G+ VG S G L
Sbjct: 307 LALNVEGGVTLWTQTQLLHRNLTAPVL----YNGSLVVGDS--------------EGYLH 348
Query: 156 KLDVRNGRIIWQ 167
+D NGR + Q
Sbjct: 349 WMDTDNGRFVAQ 360
>gi|114562297|ref|YP_749810.1| outer membrane protein assembly complex subunit YfgL [Shewanella
frigidimarina NCIMB 400]
gi|114333590|gb|ABI70972.1| Pyrrolo-quinoline quinone [Shewanella frigidimarina NCIMB 400]
Length = 411
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 85/223 (38%), Gaps = 29/223 (13%)
Query: 32 WSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIW--EQNLSKLTGLSGT---- 85
WS A ++ + P VA VV + G A N NG +W E L LT L GT
Sbjct: 145 WSAQANGELLSAPTVAEDVVAVNTSKGAFEAFNIDNGKKLWTYEMQLPNLT-LRGTGSAA 203
Query: 86 ----GIVVNVTVAVVVAVSRSNGELVWSTQI-DPRPRSQITMSGSVYMGAFYVGLSSLEE 140
G + V V +SNG+ W + P ++ T + M +G E
Sbjct: 204 YEAGGFFLGTADGKVAVVVKSNGQAAWEQPVFSPTGANEFTRMADIDMTPLVLG-----E 258
Query: 141 ALPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYSGAAVWGSSPAIDVIRRQ- 199
L ++ G+L +++R+GR++W N G S V S V RR
Sbjct: 259 NL---YVASYNGNLVSMELRSGRVVWSRKYSSFNDLAAAGISLYLVDDHSRIYSVDRRNG 315
Query: 200 --------KQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRI 234
+N + T P D I + + +D +SG I
Sbjct: 316 LELWSTSVLKNRELTAPAVIDNYIVVGDFEGYLHFIDRNSGDI 358
>gi|254434401|ref|ZP_05047909.1| outer membrane assembly lipoprotein YfgL [Nitrosococcus oceani
AFC27]
gi|207090734|gb|EDZ68005.1| outer membrane assembly lipoprotein YfgL [Nitrosococcus oceani
AFC27]
Length = 399
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 72/156 (46%), Gaps = 32/156 (20%)
Query: 32 WSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIW--EQNLSKLTGLSGTG--I 87
W +I + P+VA+GVV S + +Y ++A +G+ +W + N+ LT L G I
Sbjct: 148 WRTSVSSEILSAPSVADGVVVIRSGDDQVYGLDARDGSRLWAYQHNVPILT-LRGVAAPI 206
Query: 88 VVNVTVAV------VVAVSRSNGELVWSTQI-DPRPRSQ------ITMSGSVYMGAFYVG 134
VV+ + +VA+S +G+L+W I PR R++ I +VY G Y
Sbjct: 207 VVDRKAIIGLAGGKLVALSLEDGQLLWERAIVVPRGRTELDRLADIDSKPAVYGGYLY-- 264
Query: 135 LSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYM 170
T+ G +A L + +G I+W M
Sbjct: 265 ------------TVTYNGRIAALWLADGDILWTREM 288
>gi|20093073|ref|NP_619148.1| cell surface protein [Methanosarcina acetivorans C2A]
gi|19918398|gb|AAM07628.1| cell surface protein [Methanosarcina acetivorans C2A]
Length = 1386
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 49/112 (43%), Gaps = 9/112 (8%)
Query: 27 NLRLRWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTGL---- 82
N L W + G ++ + P VA ++Y N ++YA N G L+WE++ S G
Sbjct: 48 NSTLSWEYKLGANVDSAPIVAGDMMYALVGNNHIYAFNRITGELVWEESTSGSLGFLIGN 107
Query: 83 --SGTGIV-VNVTVAVVVAVSRSNGELVWSTQIDPRPRSQ--ITMSGSVYMG 129
G GIV V T + A G+L W+ + + + G +Y G
Sbjct: 108 AAVGNGIVFVPTTNGQIFAFDAETGDLKWNKTVSSKQLDTPIVYSDGKIYFG 159
>gi|417791227|ref|ZP_12438702.1| outer membrane biogenesis protein BamB [Cronobacter sakazakii E899]
gi|429116537|ref|ZP_19177455.1| Outer membrane protein YfgL, lipoprotein component of the protein
assembly complex (forms a complex with YaeT, YfiO, and
NlpB) [Cronobacter sakazakii 701]
gi|449307265|ref|YP_007439621.1| outer membrane biogenesis protein BamB [Cronobacter sakazakii
SP291]
gi|333954670|gb|EGL72497.1| outer membrane biogenesis protein BamB [Cronobacter sakazakii E899]
gi|426319666|emb|CCK03568.1| Outer membrane protein YfgL, lipoprotein component of the protein
assembly complex (forms a complex with YaeT, YfiO, and
NlpB) [Cronobacter sakazakii 701]
gi|449097298|gb|AGE85332.1| outer membrane biogenesis protein BamB [Cronobacter sakazakii
SP291]
Length = 393
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 96/244 (39%), Gaps = 59/244 (24%)
Query: 44 PAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTGL---------------SGTGIV 88
PA +G VY G + AVN+ +G IW +LS+ TG G +
Sbjct: 65 PAFLDGNVYAADRRGTVKAVNSQDGKEIWSIDLSEKTGFFSRNRPALLSGGLTAVGAHVY 124
Query: 89 VNVTVAVVVAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCC 148
V A V A++ S+G + W T++ S+ +S + +
Sbjct: 125 VGSEKAQVYALNTSDGSIAWQTKVAGEALSRPVVSDGLVL------------------IH 166
Query: 149 TFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYSGAAVWGSS--------PAIDVIRR-- 198
T G L L+ +G I W + + RG + A+ +G++ + +++R
Sbjct: 167 TSNGMLQALNESDGAIKWTVNLDMPSLSLRGESAPASAFGAAIVGGDNGRVSAVLMQRGQ 226
Query: 199 ---QKQNNQTTKPTHPDQCISSDI-------------YANSIVALDIDSGRIAWAKPLGG 242
Q++ +Q T T D+ D Y ++ ALD+ SG+I W + LG
Sbjct: 227 MIWQQRISQATGATEIDRLSDVDTTPVIVNGVVYALAYNGNLTALDLRSGQIMWKRELGS 286
Query: 243 YDIF 246
+ F
Sbjct: 287 VNDF 290
Score = 41.6 bits (96), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 64/155 (41%), Gaps = 26/155 (16%)
Query: 30 LRWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLS----KLTGLSGT 85
+ W + + P V++G+V + NG L A+N +GA+ W NL L G S
Sbjct: 142 IAWQTKVAGEALSRPVVSDGLVLIHTSNGMLQALNESDGAIKWTVNLDMPSLSLRGESAP 201
Query: 86 GIVVNVTVA-----VVVAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEE 140
+ V AV G+++W +I SQ T GA + S +
Sbjct: 202 ASAFGAAIVGGDNGRVSAVLMQRGQMIWQQRI-----SQAT-------GATEIDRLSDVD 249
Query: 141 ALPAD-----QCCTFRGSLAKLDVRNGRIIWQTYM 170
P + G+L LD+R+G+I+W+ +
Sbjct: 250 TTPVIVNGVVYALAYNGNLTALDLRSGQIMWKREL 284
Score = 38.5 bits (88), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 61/132 (46%), Gaps = 21/132 (15%)
Query: 39 DISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG--LSGTGIVVNVTVAVV 96
D+ TP + NGVVY ++NG L A++ +G ++W++ L + + G I + V
Sbjct: 247 DVDTTPVIVNGVVYALAYNGNLTALDLRSGQIMWKRELGSVNDFIVDGGRIYLVDQNDNV 306
Query: 97 VAVSRSNGELVWS-TQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLA 155
+A++ G +W+ TQ+ R + + Y G+ VG S G L
Sbjct: 307 LALNVEGGITLWTQTQLLHRNLTAPVL----YNGSLVVGDS--------------EGYLH 348
Query: 156 KLDVRNGRIIWQ 167
+D NGR + Q
Sbjct: 349 WMDTDNGRFVAQ 360
>gi|300023134|ref|YP_003755745.1| methanol/ethanol family PQQ-dependent dehydrogenase [Hyphomicrobium
denitrificans ATCC 51888]
gi|299524955|gb|ADJ23424.1| PQQ-dependent dehydrogenase, methanol/ethanol family
[Hyphomicrobium denitrificans ATCC 51888]
Length = 608
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 68/362 (18%), Positives = 133/362 (36%), Gaps = 85/362 (23%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRN---LRLRWSFYAG--KDISATPAVANGVVYFPS 55
W GD RY+ ++ +T N L++ W+F G + P V ++ S
Sbjct: 36 WAIQSGDYAGTRYS----TLDQITTENVGQLKVAWTFSTGVLRGHEGGPLVIGDTMWLHS 91
Query: 56 -WNGYLYAVN-AFNGALIWE---------------QNLSKLTGLSGTGIVVNVTVAVVVA 98
+ ++A+N A +IW+ +++ + I ++ +VA
Sbjct: 92 AFPNIVFALNLADEQKIIWKYEPKQDPSVIPVMCCDTVNRGLAYADGKIFLHQADTSLVA 151
Query: 99 VSRSNGELVWST-QIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKL 157
+ G+ +W DP+ T + V +G+S E + R +
Sbjct: 152 LDAKTGKELWKVVDGDPKKGETGTQAPMVVKDKVVIGISGAEFGV--------RCHMTAY 203
Query: 158 DVRNGRIIWQTY-MLPDN-------------------------GGKRGGYSGAAVWGS-- 189
D+ +G+ +W+ Y M PD+ G + G + WG
Sbjct: 204 DINSGKKVWRAYSMGPDSDILVDPEKTMMLGKPVGKDSSLKTWNGDQWKIGGGSTWGYMA 263
Query: 190 -SPAIDVIRRQKQNNQTTKPTH---PDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDI 245
P ++++ N T P+ PD +Y+ ++ A D+D+G WA + +D
Sbjct: 264 YDPDLNLMYYGTGNPSTWNPSQRAGPDGKPIDQLYSMTMFARDVDTGVAKWAYQMTPFD- 322
Query: 246 FYFTCLVPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGD 305
D D P+L + +G R + ++GF + +DR +G+
Sbjct: 323 -----------------EWDYDGINEPILAELDFDGTKRAIATHFDRNGFGYTWDRATGE 365
Query: 306 II 307
++
Sbjct: 366 LL 367
>gi|77164339|ref|YP_342864.1| Pyrrolo-quinoline quinone [Nitrosococcus oceani ATCC 19707]
gi|76882653|gb|ABA57334.1| Pyrrolo-quinoline quinone [Nitrosococcus oceani ATCC 19707]
Length = 372
Score = 46.6 bits (109), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 72/156 (46%), Gaps = 32/156 (20%)
Query: 32 WSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIW--EQNLSKLTGLSGTG--I 87
W +I + P+VA+GVV S + +Y ++A +G+ +W + N+ LT L G I
Sbjct: 121 WRTSVSSEILSAPSVADGVVVIRSGDDQVYGLDARDGSRLWAYQHNVPILT-LRGVAAPI 179
Query: 88 VVNVTVAV------VVAVSRSNGELVWSTQI-DPRPRSQ------ITMSGSVYMGAFYVG 134
VV+ + +VA+S +G+L+W I PR R++ I +VY G Y
Sbjct: 180 VVDRKAIIGLAGGKLVALSLEDGQLLWERAIVVPRGRTELDRLADIDSKPAVYGGYLY-- 237
Query: 135 LSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYM 170
T+ G +A L + +G I+W M
Sbjct: 238 ------------TVTYNGRIAALWLADGDILWTREM 261
>gi|338740427|ref|YP_004677389.1| PQQ-linked dehydrogenase [Hyphomicrobium sp. MC1]
gi|337760990|emb|CCB66823.1| putative PQQ-linked dehydrogenase precursor [Hyphomicrobium sp.
MC1]
Length = 622
Score = 46.6 bits (109), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 70/304 (23%), Positives = 110/304 (36%), Gaps = 101/304 (33%)
Query: 44 PAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTGLSGTGIVVNVTVAVVVAVSRSN 103
PA ANG V+F + +G AV+A +G IW L +T +
Sbjct: 162 PAYANGRVFFNTLDGNTIAVDATSGKEIWRTQLGDIT----------------------H 199
Query: 104 GELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGR 163
GE ITM+ V VG S E + RG +A LD G+
Sbjct: 200 GE-------------TITMAPLVAKDKVLVGDSGGEMGV--------RGWIAALDQATGK 238
Query: 164 IIWQTY----------------MLPDNGGKRGGYS----------GAAVWG---SSPAID 194
I W+ Y P GK G S G VWG P ++
Sbjct: 239 IDWKAYSTGPDSEVLIGSDFKPFYPQYKGKDLGVSTWPADMWRHGGGTVWGWVAYDPDLN 298
Query: 195 VIRRQKQN----NQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTC 250
++ N N + +P +++ I A D+++G+ W FY T
Sbjct: 299 LVYYGTSNPGPWNSSMRP-------GDNMWTAGIFARDLNTGQARW---------FYQTS 342
Query: 251 LVPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDIIWFK 310
P D D +L+ + NG+ R ++V ++G+ + DR++G+++ K
Sbjct: 343 ---------PHDMSDYDGVNETILIDANWNGKPRKLLVHPDRNGYVYVLDRETGEVLSAK 393
Query: 311 LAGP 314
P
Sbjct: 394 PFAP 397
>gi|217979830|ref|YP_002363977.1| Pyrrolo-quinoline quinone [Methylocella silvestris BL2]
gi|217505206|gb|ACK52615.1| Pyrrolo-quinoline quinone [Methylocella silvestris BL2]
Length = 562
Score = 46.6 bits (109), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 67/320 (20%), Positives = 124/320 (38%), Gaps = 68/320 (21%)
Query: 20 INPVTVRNLRLRWSFYAGKDIS---ATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQN- 75
IN V LR+ W G S +TP VA+G+ Y+ + N ++A+N G +W
Sbjct: 61 INAKNVGKLRVAWIHQPGDITSGLLSTPLVADGIFYYVAANDNVFALNGATGEKLWHYQP 120
Query: 76 -----------LSKLTGLS-GTGIVVNVTV-AVVVAVSRSNGELVWST--QIDPRP---- 116
S++ +S G G + T+ VVA+ + G+ WS+ +D +
Sbjct: 121 KLAPVASQSFYASQIRNISMGHGFIYLGTLDGRVVAIDQKTGKEAWSSVPLVDLKKCYGC 180
Query: 117 --RSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDN 174
S ++G V +G G DQ G + +D G+++W D+
Sbjct: 181 LFSSTPVLAGDVLVGGTTGG----------DQ--PIAGQIFGVDAHTGKLLWTFKTTKDD 228
Query: 175 ----GGKRGGYSGAAVWGS---SPAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVAL 227
G G G+ W P D + N + + ++Y+ S++AL
Sbjct: 229 PKSWPGDTGAVGGSTAWNVGTYDPTTDTVFIGVGN--AAPDFYWNDRHGDNLYSASLLAL 286
Query: 228 DIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVV 287
D +G++ W + PG + D D +++ + + ++
Sbjct: 287 DPKTGKLKWHR------------------QEVPGDHYDYDASYEAVVI----DHEGKQLI 324
Query: 288 VAVQKSGFAWAFDRDSGDII 307
+ + KSGF + D++ G +
Sbjct: 325 MHLSKSGFVFVMDKEDGKLF 344
>gi|146306991|ref|YP_001187456.1| Pyrrolo-quinoline quinone [Pseudomonas mendocina ymp]
gi|145575192|gb|ABP84724.1| Pyrrolo-quinoline quinone [Pseudomonas mendocina ymp]
Length = 591
Score = 46.6 bits (109), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 76/351 (21%), Positives = 132/351 (37%), Gaps = 75/351 (21%)
Query: 2 LNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAG----KDISATPAVANGVVYFPSWN 57
+ +G L +RY+ +L N V+ LR W+ G + A P + +GV+Y +
Sbjct: 45 VTNGLGLQGQRYSPLNIL-NDQNVKELRPVWTMSFGGEKQRGQQAQPLIKDGVMYVTASY 103
Query: 58 GYLYAVNAFNGALIWEQNLSKLTGLSGTGIVVNVTVAV-------------VVAVSRSNG 104
++AV+A G +W+ + V+N VA+ +VA+++ +G
Sbjct: 104 SRVFAVDARTGRELWQYEARLPDDIRPCCDVINRGVALYDDLVIFGTLDAKLVALNKDSG 163
Query: 105 ELVWSTQI-DPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGR 163
++VWS ++ D + IT + V G G+S E + G + D +NG
Sbjct: 164 KVVWSKRVADHKAGYSITAAPLVVGGKLITGVSGGEFGV--------VGKIEAYDPKNGD 215
Query: 164 IIWQT--------YMLPDNGGKRGGYSGAA--------VW---GSSPAIDVIRRQKQN-- 202
++W Y+ D G SG +W G++P + N
Sbjct: 216 LLWSRPTVEGHMGYVYKDGKAVENGISGGEAGKTWPGDLWKTGGAAPWLGGYYDADTNLL 275
Query: 203 ---NQTTKPTHPDQCISSDIYANSIVALDIDSGRIAW---AKPLGGYDIFYFTCLVPNNP 256
P + ++Y++S +AL+ D G I W P G+D LV
Sbjct: 276 FFGTGNPAPWNSHLRPGDNLYSSSRLALNPDDGSIKWHFQTTPHDGWDFDGVNELV---- 331
Query: 257 DCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
D+ E G+ ++GF + DR +G I
Sbjct: 332 --------SFDYQEG---------GKTIKAAATADRNGFFYVLDRTNGKFI 365
>gi|432393024|ref|ZP_19635854.1| lipoprotein yfgL [Escherichia coli KTE21]
gi|432863375|ref|ZP_20087422.1| lipoprotein yfgL [Escherichia coli KTE146]
gi|430918180|gb|ELC39219.1| lipoprotein yfgL [Escherichia coli KTE21]
gi|431403973|gb|ELG87233.1| lipoprotein yfgL [Escherichia coli KTE146]
Length = 392
Score = 46.6 bits (109), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 94/243 (38%), Gaps = 58/243 (23%)
Query: 44 PAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG--------------LSGTGIVV 89
PA+A+ VVY G + A+NA +G IW +L++ G +SG + +
Sbjct: 65 PALADNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVSGGHVYI 124
Query: 90 NVTVAVVVAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCT 149
A V A++ S+G + W T++ S+ +S + + T
Sbjct: 125 GSEKAQVYALNTSDGTVAWQTKVAGEALSRPVVSDGLVL------------------IHT 166
Query: 150 FRGSLAKLDVRNGRIIWQTYMLPDNGGKRG------GYSGAAVWGSSPAIDVIRR----- 198
G L L+ +G + W + + RG + A V G + + +
Sbjct: 167 SNGQLQALNETDGAVKWTVNLDMPSLSLRGESAPATAFGAAVVGGDNGRVSAVLMEQGQM 226
Query: 199 --QKQNNQTTKPTHPDQCISSDI-------------YANSIVALDIDSGRIAWAKPLGGY 243
Q++ +Q T T D+ D Y ++ ALD+ SG+I W + LG
Sbjct: 227 IWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQIMWKRELGSV 286
Query: 244 DIF 246
+ F
Sbjct: 287 NDF 289
Score = 42.0 bits (97), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 63/157 (40%), Gaps = 34/157 (21%)
Query: 32 WSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLS----KLTGLSGTGI 87
W + + P V++G+V + NG L A+N +GA+ W NL L G S
Sbjct: 143 WQTKVAGEALSRPVVSDGLVLIHTSNGQLQALNETDGAVKWTVNLDMPSLSLRGESAPAT 202
Query: 88 VVNVTVA-----VVVAVSRSNGELVW---------STQIDPRPRSQITMSGSVYMGAFYV 133
V V AV G+++W ST+ID S + + V G +
Sbjct: 203 AFGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEID--RLSDVDTTPVVVNGVVF- 259
Query: 134 GLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYM 170
+ G+L LD+R+G+I+W+ +
Sbjct: 260 -------------ALAYNGNLTALDLRSGQIMWKREL 283
Score = 38.9 bits (89), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 61/131 (46%), Gaps = 19/131 (14%)
Query: 39 DISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG--LSGTGIVVNVTVAVV 96
D+ TP V NGVV+ ++NG L A++ +G ++W++ L + + G I + V
Sbjct: 246 DVDTTPVVVNGVVFALAYNGNLTALDLRSGQIMWKRELGSVNDFIVDGNRIYLVDQNDRV 305
Query: 97 VAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAK 156
+A++ G +W TQ D R + S +Y G VG S G L
Sbjct: 306 MALTIDGGVTLW-TQSDLLHR--LLTSPVLYNGNLVVGDS--------------EGYLHW 348
Query: 157 LDVRNGRIIWQ 167
++V +GR + Q
Sbjct: 349 INVEDGRFVAQ 359
>gi|384215933|ref|YP_005607099.1| alcohol dehydrogenase [Bradyrhizobium japonicum USDA 6]
gi|354954832|dbj|BAL07511.1| alcohol dehydrogenase [Bradyrhizobium japonicum USDA 6]
Length = 572
Score = 46.6 bits (109), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 71/343 (20%), Positives = 131/343 (38%), Gaps = 72/343 (20%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAGKD---ISATPAVANGVVYFPSWN 57
WL + G + Y+ IN T+ NL + W+ G+ + + P VA+GV+Y+
Sbjct: 41 WLTYHGSYKSHHYS-PLAQINANTIGNLGVAWTHIPGRSTRGLQSMPLVADGVLYYSGSY 99
Query: 58 GYLYAVNAFNGALIW-------EQNLSKLT--------GLSGTGIVVNVTVAVVVAVSRS 102
++A+N G +IW E +S+ T L + V + +
Sbjct: 100 SRVFALNGATGEVIWSFFPELDEALISRQTHSPYNRGVALGEGKVFVGTMDGRLFGLDAK 159
Query: 103 NGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNG 162
+G+++W T++ + + +G+ V + S P RG + +D G
Sbjct: 160 SGKVLWETRLIDSQKLTVGFTGAPLYAKGSVIIGSQGGEWPG------RGPIFAVDATTG 213
Query: 163 RIIWQ--TYMLPDNGGKRGG-------------------YSGAAVWGSSPAIDVIRRQKQ 201
+ W+ T D K G + + +WG++ +
Sbjct: 214 KKKWEFLTVAGTDEAMKTWGNDSWRTGGGGGWMPGTYDSETNSILWGTANPAPLYDWSGA 273
Query: 202 NNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPG 261
+ +T D ++Y +S++ALDID+G++ +D + F
Sbjct: 274 DYKTQGARPGD-----NLYTSSVIALDIDTGKLKSYHQELPHDAWDF------------- 315
Query: 262 PNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSG 304
D+ GE ML +G + VV K GF + +DR+ G
Sbjct: 316 ---DSAVGEFVML---ERDG--QKYVVHPNKGGFVFVYDRNLG 350
>gi|407685037|ref|YP_006800211.1| methanol/ethanol family PQQ-dependent dehydrogenase [Alteromonas
macleodii str. 'English Channel 673']
gi|407246648|gb|AFT75834.1| methanol/ethanol family PQQ-dependent dehydrogenase [Alteromonas
macleodii str. 'English Channel 673']
Length = 595
Score = 46.6 bits (109), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 71/348 (20%), Positives = 129/348 (37%), Gaps = 69/348 (19%)
Query: 2 LNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAG----KDISATPAVANGVVYFPSWN 57
+ +G L +RY+ IN TV +R W+F G + + P V +GV+Y
Sbjct: 44 VTYGMGLKAQRYS-PLTAINRDTVEEVRPVWAFSLGGEKQRGQESQPLVKDGVMYVTGSY 102
Query: 58 GYLYAVNAFNGALIWEQNLSKLTGLSGTGIVVNVTVAV-------------VVAVSRSNG 104
++A++A G +W+ G+ V+N VA+ +VA+ + G
Sbjct: 103 SRVWAIDARTGEELWQYEARLPDGIMPCCDVINRGVALYDNLVIFGTLDAKLVALDKDTG 162
Query: 105 ELVWSTQI-DPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGR 163
+ VW ++ D R IT + V G G+S E + G + D ++G+
Sbjct: 163 KTVWKKKVEDYRAGYAITAAPIVVDGKVITGISGGEFGI--------VGKVYAYDAKSGK 214
Query: 164 IIW--------QTYMLPDNGGKRGGYSGAA--------VWGSSPAIDVIRRQKQNNQ--- 204
+W Y+ D G SG A +W + A + ++
Sbjct: 215 QLWVRPTVEGHMGYLWKDGKKTENGISGGAPGKTWPADLWKTGGAATWLGGTYDSDTGLL 274
Query: 205 -----TTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCP 259
P + + +++S +A+D ++G+I W +F
Sbjct: 275 FFGTGNPAPWNSHLRPGDNYFSSSRLAIDPNTGKIVW----------HFQTT-------- 316
Query: 260 PGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
P D D + NG+ ++GF + +R++GD I
Sbjct: 317 PHDGWDFDGVNELISFDYQENGKTVKAAATADRNGFFYVLNRENGDFI 364
>gi|435849092|ref|YP_007311342.1| PQQ repeat protein [Natronococcus occultus SP4]
gi|433675360|gb|AGB39552.1| PQQ repeat protein [Natronococcus occultus SP4]
Length = 594
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 56/125 (44%), Gaps = 19/125 (15%)
Query: 43 TPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTGLSGTGIVVNVTVAVVVAVSRS 102
T AVA+ VY P+ +G + A++A +G + WE + S G V ++ +VA+ RS
Sbjct: 87 TVAVADETVYAPT-DGAVLALDATDGTVRWENAEIDASTPSVAGESVYLSGEEIVALDRS 145
Query: 103 NGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNG 162
+G + W T D P +I Y G + V G+L LD +G
Sbjct: 146 DGSVRWETSFD--PEEEIHWQTVAYGGVYAV----------------VDGTLYALDADDG 187
Query: 163 RIIWQ 167
+ W+
Sbjct: 188 SVRWE 192
>gi|432111618|gb|ELK34720.1| Acyl-CoA synthetase family member 4 [Myotis davidii]
Length = 675
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 62/137 (45%), Gaps = 17/137 (12%)
Query: 10 NRRYAYGEVLINPVTVRNLRLRWSFYAGKDISATPAV-------ANGVVYFPSWNGYLYA 62
+ Y G +I T+ LR+RW GK + A+P V ++ VY S + + A
Sbjct: 316 EKVYEDGTSVITAETME-LRVRWRADTGKCVDASPLVVIPAVDKSSATVYIGSHSHRMMA 374
Query: 63 VNAFNGALIWEQNL------SKLTGLSGTGIVVNVTVAVVVAVSRSNGELVWSTQIDPRP 116
V+ ++G + WEQ L S G IVV +V + +NGE W +
Sbjct: 375 VDLYSGKVKWEQLLGDRIESSACVSKCGNFIVVGCYNGLVYVLKSNNGEKHWMFTTEDAV 434
Query: 117 RSQITM---SGSVYMGA 130
+S TM +G +Y+G+
Sbjct: 435 KSSATMDPSTGFLYLGS 451
>gi|407701279|ref|YP_006826066.1| methanol/ethanol family PQQ-dependent dehydrogenase [Alteromonas
macleodii str. 'Black Sea 11']
gi|407250426|gb|AFT79611.1| methanol/ethanol family PQQ-dependent dehydrogenase [Alteromonas
macleodii str. 'Black Sea 11']
Length = 604
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 71/348 (20%), Positives = 129/348 (37%), Gaps = 69/348 (19%)
Query: 2 LNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAG----KDISATPAVANGVVYFPSWN 57
+ +G L +RY+ IN TV +R W+F G + + P V +GV+Y
Sbjct: 53 VTYGMGLKAQRYS-PLTAINRDTVEEVRPVWAFSLGGEKQRGQESQPLVKDGVMYVTGSY 111
Query: 58 GYLYAVNAFNGALIWEQNLSKLTGLSGTGIVVNVTVAV-------------VVAVSRSNG 104
++A++A G +W+ G+ V+N VA+ +VA+ + G
Sbjct: 112 SRVWAIDARTGEELWQYEARLPDGIMPCCDVINRGVALYDNLVIFGTLDAKLVALDKDTG 171
Query: 105 ELVWSTQI-DPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGR 163
+ VW ++ D R IT + V G G+S E + G + D ++G+
Sbjct: 172 KTVWKKKVEDYRAGYAITAAPIVVDGKVITGISGGEFGI--------VGKVYAYDAKSGK 223
Query: 164 IIW--------QTYMLPDNGGKRGGYSGAA--------VWGSSPAIDVIRRQKQNNQ--- 204
+W Y+ D G SG A +W + A + ++
Sbjct: 224 QLWVRPTVEGHMGYLWKDGKKTENGISGGAPGKTWPADLWKTGGAATWLGGTYDSDTGLL 283
Query: 205 -----TTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCP 259
P + + +++S +A+D ++G+I W +F
Sbjct: 284 FFGTGNPAPWNSHLRPGDNYFSSSRLAIDPNTGKIVW----------HFQTT-------- 325
Query: 260 PGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
P D D + NG+ ++GF + +R++GD I
Sbjct: 326 PHDGWDFDGVNELISFDYQENGKTVKAAATADRNGFFYVLNRENGDFI 373
>gi|163849340|ref|YP_001637384.1| protein kinase [Chloroflexus aurantiacus J-10-fl]
gi|222527334|ref|YP_002571805.1| serine/threonine protein kinase [Chloroflexus sp. Y-400-fl]
gi|163670629|gb|ABY36995.1| protein kinase [Chloroflexus aurantiacus J-10-fl]
gi|222451213|gb|ACM55479.1| serine/threonine protein kinase [Chloroflexus sp. Y-400-fl]
Length = 672
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 71/164 (43%), Gaps = 26/164 (15%)
Query: 30 LRWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQN----LSKLTGLSGT 85
+RW+F GK I ++P + + V++ S + ++YA++ G LIW+ + ++G+
Sbjct: 437 VRWTFRTGKAIRSSPRIDDRVIFVGSDDQHVYAIDGLRGTLIWKYRTWNPIRSSACINGS 496
Query: 86 GIVVNVTVAVVVAVSRSNGELVWSTQIDPRPRSQITMS-GSVYMGAFYVGLSSL--EEAL 142
+ + V + G + W + RS S G V++G+ L +L E
Sbjct: 497 SVFIGGDDGNVYCLDSRTGSVKWKQRTQQPVRSSPAYSDGLVFVGSLDQNLYALDAEGGW 556
Query: 143 PADQCCT-------------------FRGSLAKLDVRNGRIIWQ 167
PA + T G + LD +NGR++W+
Sbjct: 557 PAWRFRTGHYINSSPFVVGTRVFVGGVDGVMYALDTKNGRLVWK 600
Score = 44.7 bits (104), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 67/146 (45%), Gaps = 22/146 (15%)
Query: 26 RNLRLRWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTGLS-- 83
R ++W + + ++PA ++G+V+ S + LYA++A G W S
Sbjct: 513 RTGSVKWKQRTQQPVRSSPAYSDGLVFVGSLDQNLYALDAEGGWPAWRFRTGHYINSSPF 572
Query: 84 --GTGIVVNVTVAVVVAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEA 141
GT + V V+ A+ NG LVW ++ SQIT S V G Y G ++++A
Sbjct: 573 VVGTRVFVGGVDGVMYALDTKNGRLVWKYEVG----SQITSSPRVEGGRLYFG--AVDQA 626
Query: 142 LPADQCCTFRGSLAKLDVRNGRIIWQ 167
+ C LD +G++IW+
Sbjct: 627 V----YC--------LDAGSGQLIWK 640
>gi|432417993|ref|ZP_19660591.1| lipoprotein yfgL [Escherichia coli KTE44]
gi|430938098|gb|ELC58341.1| lipoprotein yfgL [Escherichia coli KTE44]
Length = 392
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 94/226 (41%), Gaps = 24/226 (10%)
Query: 44 PAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG--------------LSGTGIVV 89
PA+A+ VVY G + A+NA +G IW +L++ G +SG + +
Sbjct: 65 PALADNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVSGGHVYI 124
Query: 90 NVTVAVVVAVSRSNGELVWSTQIDPRPRSQ-ITMSGSVYMGAFYVGLSSLEEALPADQCC 148
A V A++ S+G + W T++ S+ + G V + L +L EA A +
Sbjct: 125 GSEKAQVYALNTSDGTVAWQTKVAGEALSRPVVSDGLVLIHTSNGQLQALNEADGAVK-W 183
Query: 149 TFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYS------GAAVWGS--SPAIDVIRRQK 200
T + L +R + GG G S G +W S A +
Sbjct: 184 TVNLDMPSLSLRGESAPATAFGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDR 243
Query: 201 QNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIF 246
++ T P + + + Y ++ ALD+ SG+I W + LG + F
Sbjct: 244 LSDVDTIPVVVNGVVFALAYNGNLTALDLRSGQIMWKRELGSVNDF 289
Score = 42.0 bits (97), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 64/153 (41%), Gaps = 26/153 (16%)
Query: 32 WSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLS----KLTGLSGTGI 87
W + + P V++G+V + NG L A+N +GA+ W NL L G S
Sbjct: 143 WQTKVAGEALSRPVVSDGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPAT 202
Query: 88 VVNVTVA-----VVVAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEAL 142
V V AV G+++W +I SQ T G+ + S + +
Sbjct: 203 AFGAAVVGGDNGRVSAVLMEQGQMIWQQRI-----SQAT-------GSTEIDRLSDVDTI 250
Query: 143 PADQ-----CCTFRGSLAKLDVRNGRIIWQTYM 170
P + G+L LD+R+G+I+W+ +
Sbjct: 251 PVVVNGVVFALAYNGNLTALDLRSGQIMWKREL 283
>gi|170741185|ref|YP_001769840.1| methanol/ethanol family PQQ-dependent dehydrogenase
[Methylobacterium sp. 4-46]
gi|168195459|gb|ACA17406.1| PQQ-dependent dehydrogenase, methanol/ethanol family
[Methylobacterium sp. 4-46]
Length = 613
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 70/338 (20%), Positives = 127/338 (37%), Gaps = 79/338 (23%)
Query: 20 INPVTVRNLRLRWSFYAG--KDISATPAVANGVVYFPS-WNGYLYAVNAFN--GALIWEQ 74
I P ++LR+ ++F G + ++P V G +Y S + L+A++ L W+
Sbjct: 74 ITPENAKSLRVAFTFSVGVNRGQESSPLVVGGTMYVLSPYPNILHALDLTKPGAPLKWQY 133
Query: 75 NLSKLTGLSGTG---------------IVVNVTVAVVVAVSRSNGELVWSTQI-DPRPRS 118
N G + N VV+V + G W T++ +
Sbjct: 134 NPKPEAAAQGVACCDVVNRGPTYADGHLFFNTLDGNVVSVDAATGVEAWKTRVGNIHLGE 193
Query: 119 QITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTY--------- 169
+TM+ V G VG + E + RG + LD ++G++ W+ +
Sbjct: 194 TMTMAPLVAHGKVLVGNAGGEMGV--------RGWIQALDQQSGKVAWKAFNTGPDKDVL 245
Query: 170 --------MLPDNGGKRGGYS---------GAAVWG---SSPAIDVIRRQKQNNQTTKPT 209
D G G S G VWG P ++++ N P
Sbjct: 246 IGSDFKPFYESDKGQDLGVRSWPPNAWEQGGGTVWGWLSYDPDLNLVYHGTGN---PGPW 302
Query: 210 HPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFG 269
+ DQ + + + I A D D+G+ W +D++ D D
Sbjct: 303 NADQRPGDNKWTSGIFARDADTGQARWFYQWSPHDLY------------------DWDGI 344
Query: 270 EAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
+LL ++ G+ R V+V +++G+ + DR SG+++
Sbjct: 345 NEQILLDMTWKGQPRKVLVRPERNGYVYILDRTSGEVL 382
>gi|407688952|ref|YP_006804125.1| methanol/ethanol family PQQ-dependent dehydrogenase [Alteromonas
macleodii str. 'Balearic Sea AD45']
gi|407292332|gb|AFT96644.1| methanol/ethanol family PQQ-dependent dehydrogenase [Alteromonas
macleodii str. 'Balearic Sea AD45']
Length = 595
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 71/348 (20%), Positives = 129/348 (37%), Gaps = 69/348 (19%)
Query: 2 LNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAG----KDISATPAVANGVVYFPSWN 57
+ +G L +RY+ IN TV +R W+F G + + P V +GV+Y
Sbjct: 44 VTYGMGLKAQRYS-PLTAINRDTVEEVRPVWAFSLGGEKQRGQESQPLVKDGVMYVTGSY 102
Query: 58 GYLYAVNAFNGALIWEQNLSKLTGLSGTGIVVNVTVAV-------------VVAVSRSNG 104
++A++A G +W+ G+ V+N VA+ +VA+ + G
Sbjct: 103 SRVWAIDARTGEELWQYEARLPDGIMPCCDVINRGVALYDNLVIFGTLDAKLVALDKDTG 162
Query: 105 ELVWSTQI-DPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGR 163
+ VW ++ D R IT + V G G+S E + G + D ++G+
Sbjct: 163 KTVWKKKVEDYRAGYAITAAPIVVDGKVITGISGGEFGI--------VGKVYAYDAKSGK 214
Query: 164 IIW--------QTYMLPDNGGKRGGYSGAA--------VWGSSPAIDVIRRQKQNNQ--- 204
+W Y+ D G SG A +W + A + ++
Sbjct: 215 QLWVRPTVEGHMGYLWKDGKKTENGISGGAPGKTWPADLWKTGGAATWLGGTYDSDTGLL 274
Query: 205 -----TTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCP 259
P + + +++S +A+D ++G+I W +F
Sbjct: 275 FFGTGNPAPWNSHLRPGDNYFSSSRLAIDPNTGKIVW----------HFQTT-------- 316
Query: 260 PGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
P D D + NG+ ++GF + +R++GD I
Sbjct: 317 PHDGWDFDGVNELISFDYQENGKTVKAAATADRNGFFYVLNRENGDFI 364
>gi|452747017|ref|ZP_21946823.1| quinoprotein alcohol dehydrogenase [Pseudomonas stutzeri NF13]
gi|452009130|gb|EME01357.1| quinoprotein alcohol dehydrogenase [Pseudomonas stutzeri NF13]
Length = 591
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 78/183 (42%), Gaps = 27/183 (14%)
Query: 2 LNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAG----KDISATPAVANGVVYFPSWN 57
+ +G L +RY+ + L N + LR W F G + A P + +GV+Y
Sbjct: 45 VTNGLGLQGQRYSTLDTL-NTNNINQLRPVWGFSLGGEKQRGQEAQPLIKDGVMYITGSY 103
Query: 58 GYLYAVNAFNGALIWEQN-------------LSKLTGLSGTGIVVNVTVAVVVAVSRSNG 104
+YA++A G +W+ + +++ L G ++ A +VA+++ G
Sbjct: 104 SRVYALDARTGKELWQYDARLPDGIMPCCDVINRGVALYGDLVIFGTLDAKLVALNKDTG 163
Query: 105 ELVWSTQI-DPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGR 163
++VW + D + +T + V G G+S E + G + D +NG
Sbjct: 164 KVVWKKTVADYKAGYSLTAAPLVVNGKLITGVSGGEFGV--------VGKIEAYDAKNGE 215
Query: 164 IIW 166
++W
Sbjct: 216 LLW 218
>gi|421520711|ref|ZP_15967373.1| Pyrrolo-quinoline quinone [Pseudomonas putida LS46]
gi|402755321|gb|EJX15793.1| Pyrrolo-quinoline quinone [Pseudomonas putida LS46]
Length = 595
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 66/334 (19%), Positives = 123/334 (36%), Gaps = 74/334 (22%)
Query: 19 LINPVTVRNLRLRWSFYAG----KDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQ 74
L+N V+ LR W+F G + A P + +GV+Y ++AV+A G +W+
Sbjct: 61 LLNVNNVKELRPVWAFSFGGEKQRGQQAQPLIKDGVMYLTGSYSRVFAVDARTGKKLWQY 120
Query: 75 N-------------LSKLTGLSGTGIVVNVTVAVVVAVSRSNGELVWSTQI-DPRPRSQI 120
+ +++ L G + A +VA+++ G++VWS ++ D + I
Sbjct: 121 DARLPDDIRPCCDVINRGVALYGNLVFFGTLDAKLVALNKDTGKVVWSKKVADHKEGYSI 180
Query: 121 TMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQT--------YMLP 172
+ + + G G++ E + G + + NG ++W Y+
Sbjct: 181 SAAPMIVNGKLITGVAGGEFGV--------VGKIQAYNPENGELLWMRPTVEGHMGYVYK 232
Query: 173 DNGGKRGGYSGAA--------VW---GSSPAIDVIRRQKQN-----NQTTKPTHPDQCIS 216
D G SG +W G++P + + N P +
Sbjct: 233 DGKAIENGISGGEAGKTWPGDLWKTGGAAPWLGGYYDPETNLILFGTGNPAPWNSHLRPG 292
Query: 217 SDIYANSIVALDIDSGRIAW---AKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPM 273
++Y++S +AL+ D G I W + P G+D L+ N
Sbjct: 293 DNLYSSSRLALNPDDGTIKWHFQSTPHDGWDFDGVNELISFN------------------ 334
Query: 274 LLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
G+ ++GF + DR +G I
Sbjct: 335 ---YKDGGKEVKAAATADRNGFFYVLDRTNGKFI 365
>gi|170725904|ref|YP_001759930.1| outer membrane protein assembly complex subunit YfgL [Shewanella
woodyi ATCC 51908]
gi|169811251|gb|ACA85835.1| outer membrane assembly lipoprotein YfgL [Shewanella woodyi ATCC
51908]
Length = 395
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 67/159 (42%), Gaps = 20/159 (12%)
Query: 19 LINPVTVRNLRLRWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIW--EQNL 76
L+ + WS G ++ + P VA +V + G L A + +G W E L
Sbjct: 132 LLGALDAETGETEWSVVTGGELLSAPTVAEDIVVVNTSAGTLEAYSVEDGEQQWIYESKL 191
Query: 77 SKLTGLSGTG--------IVVNVTVAVVVAVSRSNGELVWSTQI-DPRPRSQITMSGSVY 127
LT L GTG V + V ++NG+ W I P+ ++ T V
Sbjct: 192 PTLT-LRGTGSANYEAGGFFVGTADGKIAVVIKNNGQAAWEQAIYTPKGGNEFTRMADVD 250
Query: 128 MGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIW 166
M +G E L A +F G+L +++R+GR++W
Sbjct: 251 MMPLIIG-----ENLYA---VSFNGNLVSMELRSGRVVW 281
>gi|395448863|ref|YP_006389116.1| quinoprotein ethanol dehydrogenase [Pseudomonas putida ND6]
gi|388562860|gb|AFK72001.1| quinoprotein ethanol dehydrogenase [Pseudomonas putida ND6]
Length = 584
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 66/334 (19%), Positives = 123/334 (36%), Gaps = 74/334 (22%)
Query: 19 LINPVTVRNLRLRWSFYAG----KDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQ 74
L+N V+ LR W+F G + A P + +GV+Y ++AV+A G +W+
Sbjct: 50 LLNVNNVKELRPVWAFSFGGEKQRGQQAQPLIKDGVMYLTGSYSRVFAVDARTGKKLWQY 109
Query: 75 N-------------LSKLTGLSGTGIVVNVTVAVVVAVSRSNGELVWSTQI-DPRPRSQI 120
+ +++ L G + A +VA+++ G++VWS ++ D + I
Sbjct: 110 DARLPDDIRPCCDVINRGVALYGNLVFFGTLDAKLVALNKDTGKVVWSKKVADHKEGYSI 169
Query: 121 TMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQT--------YMLP 172
+ + + G G++ E + G + + NG ++W Y+
Sbjct: 170 SAAPMIVNGKLITGVAGGEFGV--------VGKIQAYNPENGELLWMRPTVEGHMGYVYK 221
Query: 173 DNGGKRGGYSGAA--------VW---GSSPAIDVIRRQKQN-----NQTTKPTHPDQCIS 216
D G SG +W G++P + + N P +
Sbjct: 222 DGKAIENGISGGEAGKTWPGDLWKTGGAAPWLGGYYDPETNLILFGTGNPAPWNSHLRPG 281
Query: 217 SDIYANSIVALDIDSGRIAW---AKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPM 273
++Y++S +AL+ D G I W + P G+D L+ N
Sbjct: 282 DNLYSSSRLALNPDDGTIKWHFQSTPHDGWDFDGVNELISFN------------------ 323
Query: 274 LLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
G+ ++GF + DR +G I
Sbjct: 324 ---YQDGGKEIKAAATADRNGFFYVLDRTNGKFI 354
>gi|374999193|ref|YP_004974691.1| Quinoprotein methanol/ethanol dehydrogenase [Azospirillum lipoferum
4B]
gi|357426618|emb|CBS89547.1| Quinoprotein methanol/ethanol dehydrogenase [Azospirillum lipoferum
4B]
Length = 584
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 70/325 (21%), Positives = 113/325 (34%), Gaps = 63/325 (19%)
Query: 20 INPVTVRNLRLRWSFYAG----KDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQN 75
+N TV+ L WSF G + A P V +G +Y LYAV+A G WE N
Sbjct: 61 LNADTVKKLVPVWSFSFGGEKQRGQEAQPIVYDGTIYVTGSYSRLYAVDARTGQKKWEYN 120
Query: 76 LSKLTGLSGTGIVVNVTVAV-------------VVAVSRSNGELVWSTQI-DPRPRSQIT 121
G+ VVN A+ +VA++R G++VW+ ++ D + T
Sbjct: 121 HRLPDGIMPCCDVVNRGAAIYKDKIYFATLDARLVALNRQTGKVVWNKKLQDYKEGYSNT 180
Query: 122 MSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGY 181
+ + G G S E + G + D G ++WQ + N G G
Sbjct: 181 AAPMIVDGKIITGNSGGEFGV--------IGMVEARDAETGELVWQRPTIEGNMGTLNGK 232
Query: 182 S-------------------GAAVWGSSPAIDVIRRQKQNNQTTKPTHPDQCISSDIYAN 222
G A W + P + ++Y +
Sbjct: 233 ESTVTGKTNASWPGDMYKTGGGATWLGGTYDPETKSLFFGTGNPAPWNSHLRPGDNLYTS 292
Query: 223 SIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTISTNGR 282
S +A++ D+G I W Y T P D D + + +G+
Sbjct: 293 STLAINPDNGEIKW---------HYQTT---------PHDGWDFDGVNEFVSFDLKKDGK 334
Query: 283 FRDVVVAVQKSGFAWAFDRDSGDII 307
++GF + DR++G +I
Sbjct: 335 VIKAGGKADRNGFFYVIDRNTGKLI 359
>gi|422771584|ref|ZP_16825273.1| outer membrane assembly lipoprotein YfgL [Escherichia coli E482]
gi|323941226|gb|EGB37411.1| outer membrane assembly lipoprotein YfgL [Escherichia coli E482]
Length = 392
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 94/243 (38%), Gaps = 58/243 (23%)
Query: 44 PAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG--------------LSGTGIVV 89
PA+A+ VVY G + A+NA +G IW +L++ G +SG + +
Sbjct: 65 PALADNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVSGGHVYI 124
Query: 90 NVTVAVVVAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCT 149
A V A++ S+G + W T++ S+ +S + + T
Sbjct: 125 GSEKAQVYALNTSDGTVAWQTKVAGEALSRPVVSDGLVL------------------IHT 166
Query: 150 FRGSLAKLDVRNGRIIWQTYMLPDNGGKRG------GYSGAAVWGSSPAIDVIRR----- 198
G L L+ +G + W + + RG + A V G + + +
Sbjct: 167 SNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPVTAFGAAVVGGDNGRVSAVLMEQGQM 226
Query: 199 --QKQNNQTTKPTHPDQCISSDI-------------YANSIVALDIDSGRIAWAKPLGGY 243
Q++ +Q T T D+ D Y ++ ALD+ SG+I W + LG
Sbjct: 227 IWQQRISQVTGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQIMWKRELGSV 286
Query: 244 DIF 246
+ F
Sbjct: 287 NDF 289
Score = 43.1 bits (100), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 66/152 (43%), Gaps = 24/152 (15%)
Query: 32 WSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLT-GLSGTGIVVN 90
W + + P V++G+V + NG L A+N +GA+ W NL + L G V
Sbjct: 143 WQTKVAGEALSRPVVSDGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPVT 202
Query: 91 VTVAVVV--------AVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEAL 142
A VV AV G+++W +I SQ+T S + LS ++
Sbjct: 203 AFGAAVVGGDNGRVSAVLMEQGQMIWQQRI-----SQVTGSTEIDR------LSDVDTTP 251
Query: 143 PADQCCTF----RGSLAKLDVRNGRIIWQTYM 170
F G+L LD+R+G+I+W+ +
Sbjct: 252 VVVNGVVFALAYNGNLTALDLRSGQIMWKREL 283
Score = 38.9 bits (89), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 61/131 (46%), Gaps = 19/131 (14%)
Query: 39 DISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG--LSGTGIVVNVTVAVV 96
D+ TP V NGVV+ ++NG L A++ +G ++W++ L + + G I + V
Sbjct: 246 DVDTTPVVVNGVVFALAYNGNLTALDLRSGQIMWKRELGSVNDFIVDGNRIYLVDQNDRV 305
Query: 97 VAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAK 156
+A++ G +W TQ D R + S +Y G VG S G L
Sbjct: 306 MALTIDGGVTLW-TQSDLLHR--LLTSPVLYNGNLVVGDS--------------EGYLHW 348
Query: 157 LDVRNGRIIWQ 167
++V +GR + Q
Sbjct: 349 INVEDGRFVAQ 359
>gi|423280985|ref|ZP_17259896.1| hypothetical protein HMPREF1203_04113 [Bacteroides fragilis HMW
610]
gi|404583435|gb|EKA88114.1| hypothetical protein HMPREF1203_04113 [Bacteroides fragilis HMW
610]
Length = 623
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 65/297 (21%), Positives = 116/297 (39%), Gaps = 47/297 (15%)
Query: 24 TVRNLRLRWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIW-----EQNLSK 78
T+++ + W+F +GK I TP VA+GVV F S + +Y ++A G W E L
Sbjct: 324 TLKSGQKLWNFQSGKRIVGTPDVADGVVVFGSADHNIYGLDARTGKERWRVTAGEPVLGA 383
Query: 79 LTGLSGTGIVVNVTVAVVVAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSL 138
+T G + + + A+ +G+++WS Y G+
Sbjct: 384 VTIEKGVA-YIGASDSTFRAIHIKSGKVLWS----------------------YAGIKGY 420
Query: 139 EEALPADQ-----CCTFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYSGAAVWGSSPAI 193
E P + + +L LD NG+ +W+ G R +S AAVW +
Sbjct: 421 VETKPLIEGNKVIFGAWDNTLYALDKTNGKELWKW----TGGLTRMHFSPAAVWPVAAHG 476
Query: 194 DVIRRQKQNNQTTKPTHPDQCI--SSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCL 251
V Q T + + + + L D RI ++K + + Y T
Sbjct: 477 KVFITDPQRAMTAINLETGETVWRTFQSMVRETIGLSADKKRI-YSKTMNDSVVCYST-- 533
Query: 252 VPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDIIW 308
+ + P N+ + AP + + +G +V + K G +A + +G ++W
Sbjct: 534 IGDVPKKLWASNVGFGYEHAPS-MQMEKDG----IVFSSTKEGLIFALEASTGQVLW 585
>gi|26989398|ref|NP_744823.1| quinoprotein ethanol dehydrogenase [Pseudomonas putida KT2440]
gi|24984261|gb|AAN68287.1|AE016463_1 quinoprotein ethanol dehydrogenase, putative [Pseudomonas putida
KT2440]
Length = 595
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 66/334 (19%), Positives = 123/334 (36%), Gaps = 74/334 (22%)
Query: 19 LINPVTVRNLRLRWSFYAG----KDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQ 74
L+N V+ LR W+F G + A P + +GV+Y ++AV+A G +W+
Sbjct: 61 LLNVNNVKELRPVWAFSFGGEKQRGQQAQPLIKDGVMYLTGSYSRVFAVDARTGKKLWQY 120
Query: 75 N-------------LSKLTGLSGTGIVVNVTVAVVVAVSRSNGELVWSTQI-DPRPRSQI 120
+ +++ L G + A +VA+++ G++VWS ++ D + I
Sbjct: 121 DARLPDDIRPCCDVINRGVALYGNLVFFGTLDAKLVALNKDTGKVVWSKKVADHKEGYSI 180
Query: 121 TMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQT--------YMLP 172
+ + + G G++ E + G + + NG ++W Y+
Sbjct: 181 SAAPMIVNGKLITGVAGGEFGV--------VGKIQAYNPENGELLWMRPTVEGHMGYVYK 232
Query: 173 DNGGKRGGYSGAA--------VW---GSSPAIDVIRRQKQN-----NQTTKPTHPDQCIS 216
D G SG +W G++P + + N P +
Sbjct: 233 DGKAIENGISGGEAGKTWPGDLWKTGGAAPWLGGYYDPETNLILFGTGNPAPWNSHLRPG 292
Query: 217 SDIYANSIVALDIDSGRIAW---AKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPM 273
++Y++S +AL+ D G I W + P G+D L+ N
Sbjct: 293 DNLYSSSRLALNPDDGTIKWHFQSTPHDGWDFDGVNELISFN------------------ 334
Query: 274 LLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
G+ ++GF + DR +G I
Sbjct: 335 ---YKDGGKEVKAAATADRNGFFYVLDRTNGKFI 365
>gi|404450797|ref|ZP_11015775.1| quinoprotein glucose dehydrogenase [Indibacter alkaliphilus LW1]
gi|403763577|gb|EJZ24525.1| quinoprotein glucose dehydrogenase [Indibacter alkaliphilus LW1]
Length = 733
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 46/92 (50%), Gaps = 18/92 (19%)
Query: 217 SDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLT 276
S++Y N ++ALD ++G++ W +D + D D P+L+T
Sbjct: 298 SNLYTNCLLALDANTGKLKWHFQYIHHDTW------------------DYDPSSYPVLVT 339
Query: 277 ISTNGRFRDVVVAVQKSGFAWAFDRDSGDIIW 308
+ +G+ D V K+GF + FDR++G+ ++
Sbjct: 340 VDKDGKKIDAVTQTSKTGFVYVFDRETGEPVF 371
>gi|150376090|ref|YP_001312686.1| Pyrrolo-quinoline quinone [Sinorhizobium medicae WSM419]
gi|150030637|gb|ABR62753.1| Pyrrolo-quinoline quinone [Sinorhizobium medicae WSM419]
Length = 601
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 71/359 (19%), Positives = 138/359 (38%), Gaps = 85/359 (23%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAG--KDISATPAVANGVVY----FP 54
W GD N RY+ + IN V L++ W+F G + +P V ++Y FP
Sbjct: 36 WAIQTGDYANLRYSKLD-QINKDNVGKLQVAWTFSTGVLRGHEGSPLVIGDMMYVHTPFP 94
Query: 55 SWNGYLYAVN-AFNGALIWE---------------QNLSKLTGLSGTGIVVNVTVAVVVA 98
+ +YA++ + +G ++W+ +++ + I ++ VVA
Sbjct: 95 N---TVYALDLSKDGQIVWKYEPKQDPNVIPVMCCDTVNRGVAYADNKIFLHQADTTVVA 151
Query: 99 VSRSNGELVWSTQIDPRPRSQI-TMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKL 157
+ G++ WS + + + T + VG+S E + RG +
Sbjct: 152 LDAKTGKVAWSVKNGDATKGETNTATVMPVKDKVLVGISGGEFGV--------RGHVTAY 203
Query: 158 DVRNGRIIWQTY-MLPDNG---------------GKRGGYS----------GAAVWG--- 188
+ +G+++W+ Y M PD+ GK G + G WG
Sbjct: 204 SIADGKLLWRAYSMGPDSDTLMNPEKTTHLGKPVGKDSGLTTWEGDQWKIGGGTTWGWYS 263
Query: 189 SSPAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYF 248
P ++++ N T PT Q + ++ ++ A D+D+G W ++
Sbjct: 264 YDPELNMVYYGTGNPSTWNPT---QRPGDNRWSMTVFARDVDTGEAKW--------VYQM 312
Query: 249 TCLVPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
T P D D +L +G+ R ++ ++GF + DR +G+++
Sbjct: 313 T----------PHDEWDYDGVNEMILTEQQIDGKDRKLLTHFDRNGFGYTMDRVTGELL 361
>gi|386012536|ref|YP_005930813.1| Pyrrolo-quinoline quinone [Pseudomonas putida BIRD-1]
gi|313499242|gb|ADR60608.1| Pyrrolo-quinoline quinone [Pseudomonas putida BIRD-1]
Length = 595
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 66/334 (19%), Positives = 123/334 (36%), Gaps = 74/334 (22%)
Query: 19 LINPVTVRNLRLRWSFYAG----KDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQ 74
L+N V+ LR W+F G + A P + +GV+Y ++AV+A G +W+
Sbjct: 61 LLNVNNVKELRPVWAFSFGGEKQRGQQAQPLIKDGVMYLTGSYSRVFAVDARTGKKLWQY 120
Query: 75 N-------------LSKLTGLSGTGIVVNVTVAVVVAVSRSNGELVWSTQI-DPRPRSQI 120
+ +++ L G + A +VA+++ G++VWS ++ D + I
Sbjct: 121 DARLPDDIRPCCDVINRGVALYGNLVFFGTLDAKLVALNKDTGKVVWSKKVADHKEGYSI 180
Query: 121 TMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQT--------YMLP 172
+ + + G G++ E + G + + NG ++W Y+
Sbjct: 181 SAAPMIVNGKLITGVAGGEFGV--------VGKIQAYNPENGELLWMRPTVEGHMGYVYK 232
Query: 173 DNGGKRGGYSGAA--------VW---GSSPAIDVIRRQKQN-----NQTTKPTHPDQCIS 216
D G SG +W G++P + + N P +
Sbjct: 233 DGKAIENGISGGEAGKTWPGDLWKTGGAAPWLGGYYDPETNLILFGTGNPAPWNSHLRPG 292
Query: 217 SDIYANSIVALDIDSGRIAW---AKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPM 273
++Y++S +AL+ D G I W + P G+D L+ N
Sbjct: 293 DNLYSSSRLALNPDDGTIKWHFQSTPHDGWDFDGVNELISFN------------------ 334
Query: 274 LLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
G+ ++GF + DR +G I
Sbjct: 335 ---YKDGGKEIKAAATADRNGFFYVLDRTNGKFI 365
>gi|150020291|ref|YP_001305645.1| Pyrrolo-quinoline quinone [Thermosipho melanesiensis BI429]
gi|149792812|gb|ABR30260.1| Pyrrolo-quinoline quinone [Thermosipho melanesiensis BI429]
Length = 486
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 47/84 (55%), Gaps = 7/84 (8%)
Query: 30 LRWSFYAGKDISATPAV-ANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTGLS----G 84
L+W F G DI+ +P + +G +Y SW+ LYA+N +G L W+ N+S L S
Sbjct: 339 LKWKFETGDDITTSPVIGEDGTIYVGSWDDNLYALNP-DGTLKWKFNVSSLIYSSPVIGS 397
Query: 85 TGIVVNVTVAVVVAVSRSNGELVW 108
GI+ T + AV++ +G L+W
Sbjct: 398 DGIIYVSTYYYLYAVNK-DGTLLW 420
>gi|260598898|ref|YP_003211469.1| outer membrane biogenesis protein BamB [Cronobacter turicensis
z3032]
gi|260218075|emb|CBA32821.1| Lipoprotein yfgL [Cronobacter turicensis z3032]
Length = 393
Score = 46.6 bits (109), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 95/244 (38%), Gaps = 59/244 (24%)
Query: 44 PAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTGL---------------SGTGIV 88
PA +G VY G + AVNA +G IW +LS+ TG G +
Sbjct: 65 PAFLDGNVYAADRRGTVKAVNAQDGKEIWSIDLSEKTGFFSRNRPALLSGGLTAVGAHVY 124
Query: 89 VNVTVAVVVAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCC 148
V A V A++ S+G + W ++ S+ +S + +
Sbjct: 125 VGSEKAQVYALNTSDGSIAWQAKVAGEALSRPVVSDGLVL------------------VH 166
Query: 149 TFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYSGAAVWGSS--------PAIDVIRR-- 198
T G L L+ +G I W + + RG + A+ +G++ + +++R
Sbjct: 167 TSNGMLQALNESDGAIKWTVNLDMPSLSLRGESAPASAFGAAIVGGDNGRVSAVLMQRGQ 226
Query: 199 ---QKQNNQTTKPTHPDQCISSDI-------------YANSIVALDIDSGRIAWAKPLGG 242
Q++ +Q T T D+ D Y ++ ALD+ SG+I W + LG
Sbjct: 227 LIWQQRISQATGATEIDRLSDVDTTPVIVNGVVYALAYNGNLTALDLRSGQIMWKRELGS 286
Query: 243 YDIF 246
+ F
Sbjct: 287 VNDF 290
Score = 41.6 bits (96), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 64/155 (41%), Gaps = 26/155 (16%)
Query: 30 LRWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLS----KLTGLSGT 85
+ W + + P V++G+V + NG L A+N +GA+ W NL L G S
Sbjct: 142 IAWQAKVAGEALSRPVVSDGLVLVHTSNGMLQALNESDGAIKWTVNLDMPSLSLRGESAP 201
Query: 86 GIVVNVTVA-----VVVAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEE 140
+ V AV G+L+W +I SQ T GA + S +
Sbjct: 202 ASAFGAAIVGGDNGRVSAVLMQRGQLIWQQRI-----SQAT-------GATEIDRLSDVD 249
Query: 141 ALPAD-----QCCTFRGSLAKLDVRNGRIIWQTYM 170
P + G+L LD+R+G+I+W+ +
Sbjct: 250 TTPVIVNGVVYALAYNGNLTALDLRSGQIMWKREL 284
Score = 38.5 bits (88), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 61/132 (46%), Gaps = 21/132 (15%)
Query: 39 DISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG--LSGTGIVVNVTVAVV 96
D+ TP + NGVVY ++NG L A++ +G ++W++ L + + G I + V
Sbjct: 247 DVDTTPVIVNGVVYALAYNGNLTALDLRSGQIMWKRELGSVNDFIVDGGRIYLVDQNDNV 306
Query: 97 VAVSRSNGELVWS-TQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLA 155
+A++ G +W+ TQ+ R + + Y G+ VG S G L
Sbjct: 307 LALNVEGGVTLWTQTQLLHRNLTAPVL----YNGSLVVGDS--------------EGYLH 348
Query: 156 KLDVRNGRIIWQ 167
+D NGR + Q
Sbjct: 349 WMDTDNGRFVAQ 360
>gi|406598013|ref|YP_006749143.1| methanol/ethanol family PQQ-dependent dehydrogenase [Alteromonas
macleodii ATCC 27126]
gi|406375334|gb|AFS38589.1| methanol/ethanol family PQQ-dependent dehydrogenase [Alteromonas
macleodii ATCC 27126]
Length = 595
Score = 46.6 bits (109), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 71/348 (20%), Positives = 128/348 (36%), Gaps = 69/348 (19%)
Query: 2 LNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAG----KDISATPAVANGVVYFPSWN 57
+ +G L +RY+ IN TV +R W+F G + + P V +GV+Y
Sbjct: 44 VTYGMGLKAQRYS-PLTAINRDTVEEVRPVWAFSLGGEKQRGQESQPLVKDGVMYVTGSY 102
Query: 58 GYLYAVNAFNGALIWEQNLSKLTGLSGTGIVVNVTVAV-------------VVAVSRSNG 104
++A++A G +W+ G+ V+N VA+ +VA+ + G
Sbjct: 103 SRVWAIDARTGEELWQYEARLPDGIMPCCDVINRGVALYDNLVIFGTLDAKLVALDKDTG 162
Query: 105 ELVWSTQI-DPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGR 163
+ VW ++ D R IT + V G G+S E + G + D ++G+
Sbjct: 163 KTVWKKKVEDYRAGYAITAAPIVVDGKVITGISGGEFGI--------VGKVYAYDAKSGK 214
Query: 164 IIW--------QTYMLPDNGGKRGGYSGAA--------VWGSSPAIDVIRRQKQNNQ--- 204
+W Y+ D G SG A +W + A + +
Sbjct: 215 QLWVRPTVEGHMGYLWKDGKKTENGISGGAPGKTWPADLWKTGGAATWLGGTYDTDTGLL 274
Query: 205 -----TTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCP 259
P + + +++S +A+D ++G+I W +F
Sbjct: 275 FFGTGNPAPWNSHLRPGDNYFSSSRLAIDPNTGKIVW----------HFQTT-------- 316
Query: 260 PGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
P D D + NG+ ++GF + +R++GD I
Sbjct: 317 PHDGWDFDGVNELISFDYQENGKTVKAAATADRNGFFYVLNRENGDFI 364
>gi|325272488|ref|ZP_08138868.1| Pyrrolo-quinoline quinone [Pseudomonas sp. TJI-51]
gi|324102390|gb|EGB99856.1| Pyrrolo-quinoline quinone [Pseudomonas sp. TJI-51]
Length = 577
Score = 46.6 bits (109), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 65/334 (19%), Positives = 123/334 (36%), Gaps = 74/334 (22%)
Query: 19 LINPVTVRNLRLRWSFYAG----KDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQ 74
++N V+ LR W+F G + A P + +GV+Y ++AV+A G +W+
Sbjct: 43 MLNTNNVKELRPVWAFSFGGEKQRGQQAQPLIKDGVMYLTGSYSRVFAVDARTGKKLWQY 102
Query: 75 N-------------LSKLTGLSGTGIVVNVTVAVVVAVSRSNGELVWSTQI-DPRPRSQI 120
+ +++ L G + A +VA+++ G++VWS ++ D + I
Sbjct: 103 DARLPDDIRPCCDVINRGVALYGNLVFFGTLDAKLVALNKDTGKVVWSKKVADHKEGYSI 162
Query: 121 TMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQT--------YMLP 172
+ + + G G++ E + G + + NG ++W Y+
Sbjct: 163 SAAPMIVNGKLITGVAGGEFGV--------VGKIQAYNPENGELLWMRPTVEGHMGYVYK 214
Query: 173 DNGGKRGGYSGAA--------VW---GSSPAIDVIRRQKQN-----NQTTKPTHPDQCIS 216
D G SG +W G++P + + N P +
Sbjct: 215 DGKAIENGISGGEAGKTWPGDLWKTGGAAPWLGGYYDPETNLILFGTGNPAPWNSHLRPG 274
Query: 217 SDIYANSIVALDIDSGRIAW---AKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPM 273
++Y++S +AL+ D G I W + P G+D L+ N
Sbjct: 275 DNLYSSSRLALNPDDGTIKWHFQSTPHDGWDFDGVNELISFN------------------ 316
Query: 274 LLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
G+ ++GF + DR +G I
Sbjct: 317 ---YKDGGKEVKAAATADRNGFFYVLDRTNGKFI 347
>gi|148548294|ref|YP_001268396.1| Pyrrolo-quinoline quinone [Pseudomonas putida F1]
gi|397695433|ref|YP_006533316.1| Pyrrolo-quinoline quinone [Pseudomonas putida DOT-T1E]
gi|148512352|gb|ABQ79212.1| Pyrrolo-quinoline quinone [Pseudomonas putida F1]
gi|298682206|gb|ADI95273.1| PedH [Pseudomonas putida DOT-T1E]
gi|397332163|gb|AFO48522.1| Pyrrolo-quinoline quinone [Pseudomonas putida DOT-T1E]
Length = 595
Score = 46.6 bits (109), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 66/334 (19%), Positives = 123/334 (36%), Gaps = 74/334 (22%)
Query: 19 LINPVTVRNLRLRWSFYAG----KDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQ 74
L+N V+ LR W+F G + A P + +GV+Y ++AV+A G +W+
Sbjct: 61 LLNVNNVKELRPVWAFSFGGEKQRGQQAQPLIKDGVMYLTGSYSRVFAVDARTGKKLWQY 120
Query: 75 N-------------LSKLTGLSGTGIVVNVTVAVVVAVSRSNGELVWSTQI-DPRPRSQI 120
+ +++ L G + A +VA+++ G++VWS ++ D + I
Sbjct: 121 DARLPDDIRPCCDVINRGVALYGNLVFFGTLDAKLVALNKDTGKVVWSKKVADHKEGYSI 180
Query: 121 TMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQT--------YMLP 172
+ + + G G++ E + G + + NG ++W Y+
Sbjct: 181 SAAPMIVNGKLITGVAGGEFGV--------VGKIQAYNPENGELLWMRPTVEGHMGYVYK 232
Query: 173 DNGGKRGGYSGAA--------VW---GSSPAIDVIRRQKQN-----NQTTKPTHPDQCIS 216
D G SG +W G++P + + N P +
Sbjct: 233 DGKAIENGISGGEAGKTWPGDLWKTGGAAPWLGGYYDPETNLILFGTGNPAPWNSHLRPG 292
Query: 217 SDIYANSIVALDIDSGRIAW---AKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPM 273
++Y++S +AL+ D G I W + P G+D L+ N
Sbjct: 293 DNLYSSSRLALNPDDGTIKWHFQSTPHDGWDFDGVNELISFN------------------ 334
Query: 274 LLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
G+ ++GF + DR +G I
Sbjct: 335 ---YKDGGKEIKAAATADRNGFFYVLDRTNGKFI 365
>gi|448458285|ref|ZP_21596076.1| PQQ enzyme repeat domain protein [Halorubrum lipolyticum DSM 21995]
gi|445809622|gb|EMA59662.1| PQQ enzyme repeat domain protein [Halorubrum lipolyticum DSM 21995]
Length = 421
Score = 46.6 bits (109), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 63/140 (45%), Gaps = 10/140 (7%)
Query: 32 WSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTGLSGTGIVVNV 91
W + G ++ +TPAV + VY + + YA++A +G +W ++ + S T V
Sbjct: 210 WRYGVGDEVVSTPAVDDDTVYVGASDDTFYALDAGSGEEVWTYDVGDMVWSSPTLAFDTV 269
Query: 92 TV----AVVVAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQC 147
+V AV ++GE W+ DP R I+ S +V YVG + D
Sbjct: 270 YFGDWNGIVHAVDAASGEAEWTA--DPFAR-YISGSVAVDDSGVYVGDTPYN---TLDDP 323
Query: 148 CTFRGSLAKLDVRNGRIIWQ 167
T G + K D R+G +W
Sbjct: 324 NTHYGEMHKFDRRSGEELWS 343
Score = 42.7 bits (99), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 88/379 (23%), Positives = 138/379 (36%), Gaps = 79/379 (20%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAGKDISATPAVANGVVYFPSWNGYL 60
W + GD N +A G ++P T + + W++ A +P VA+G V+ + +G +
Sbjct: 43 WPSFRGDRYNTGFARG---VSP-TSADPSVEWTYDADGPFWGSPVVADGAVFVGNADGTV 98
Query: 61 YAVNAFNGALIWEQNLSKLTGLSGTGIVVNVTVAV------VVAVSRSNGELVWSTQIDP 114
YA +A G W + + G+ + TV V V A+ +GE W +
Sbjct: 99 YAFDAATGEERW--TFATDNRIEGSPAYADGTVYVGSYDTRVYAIDADSGEATWRRDLGG 156
Query: 115 RPRSQITMSG-SVYMGAFYVGLSSLEEALPADQ----CCTFRGSLAKLDVRNGRIIWQTY 169
R T+ G + Y+G VG +L A+ A++ T G + LD G W
Sbjct: 157 LIRGSPTVVGETAYIG---VGCHNLACAVYAEESDAPSATDDGWVYALDTVTGETDW--- 210
Query: 170 MLPDNGGKRGGYSGAAVWGSSPAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDI 229
R G V S+PA+D + T D + +
Sbjct: 211 --------RYGVGDEVV--STPAVD--------DDTVYVGASDDTFYALDAGSGEEVWTY 252
Query: 230 DSGRIAWAKPLGGYDIFYFTCL--VPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVV 287
D G + W+ P +D YF + + D G +A++ P IS + D
Sbjct: 253 DVGDMVWSSPTLAFDTVYFGDWNGIVHAVDAASG---EAEWTADPFARYISGSVAVDDSG 309
Query: 288 VAVQKS------------GFAWAFDRDSGDIIW---------------------FKLAGP 314
V V + G FDR SG+ +W F G
Sbjct: 310 VYVGDTPYNTLDDPNTHYGEMHKFDRRSGEELWSFETDALEVGSSPVVTDDRLYFGTHGQ 369
Query: 315 GGREGGGVWGAATDGRRVY 333
R+G GV+G TDG +
Sbjct: 370 TDRDGLGVYGLTTDGDEAW 388
>gi|418056205|ref|ZP_12694258.1| PQQ-dependent dehydrogenase, methanol/ethanol family
[Hyphomicrobium denitrificans 1NES1]
gi|353209424|gb|EHB74827.1| PQQ-dependent dehydrogenase, methanol/ethanol family
[Hyphomicrobium denitrificans 1NES1]
Length = 608
Score = 46.6 bits (109), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 71/363 (19%), Positives = 133/363 (36%), Gaps = 87/363 (23%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRN---LRLRWSFYAG--KDISATPAVANGVVYFPS 55
W GD RY+ ++ +T N L++ W+F G + P V ++ S
Sbjct: 36 WAIQSGDYAGTRYS----TLDQITTENVGQLKVAWTFSTGVLRGHEGGPLVVGDTMWLHS 91
Query: 56 -WNGYLYAVN-AFNGALIWE---------------QNLSKLTGLSGTGIVVNVTVAVVVA 98
+ ++A+N A +IW+ +++ + I ++ +VA
Sbjct: 92 AFPNVVFALNLADEQKIIWKYEPKQDPSVIPVMCCDTVNRGVQYADGKIFLHQADTSLVA 151
Query: 99 VSRSNGELVWSTQIDPRPRSQITMSGS--VYMGAFYVGLSSLEEALPADQCCTFRGSLAK 156
+ G+ +W +D P+ T +G+ V +G+S E + R L
Sbjct: 152 LDAKTGKELWKV-VDGDPKKGETGTGAPIVVKDKVIIGISGAEFGV--------RCHLTA 202
Query: 157 LDVRNGRIIWQTY-MLPDN-------------------------GGKRGGYSGAAVWGS- 189
D+ +G+ +W+ Y M PD+ G + G + WG
Sbjct: 203 YDINSGKKVWRAYSMGPDSDILVDPEKTTMLGKPVGKNSSLKTWNGDQWKIGGGSTWGYM 262
Query: 190 --SPAIDVIRRQKQNNQTTKPTH---PDQCISSDIYANSIVALDIDSGRIAWAKPLGGYD 244
P ++++ N T P PD +Y+ ++ A D D+G WA + +D
Sbjct: 263 AYDPDLNLVYYGTGNPSTWNPAQRAGPDGKPIDQLYSMTMFARDADTGVAKWAYQMTPFD 322
Query: 245 IFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSG 304
D D P+L + NG R ++GF + +DR +G
Sbjct: 323 ------------------EWDYDGINEPILAELDFNGTKRATATHFDRNGFGYTWDRATG 364
Query: 305 DII 307
+++
Sbjct: 365 ELL 367
>gi|238785324|ref|ZP_04629313.1| hypothetical protein yberc0001_29840 [Yersinia bercovieri ATCC
43970]
gi|238713777|gb|EEQ05800.1| hypothetical protein yberc0001_29840 [Yersinia bercovieri ATCC
43970]
Length = 393
Score = 46.6 bits (109), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 65/161 (40%), Gaps = 36/161 (22%)
Query: 29 RLRWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLS----KLTGLSG 84
++ W + + P ++GVV + NG L A+N +GA+ W NL L G S
Sbjct: 141 QIAWQTVVAGEALSRPVASDGVVLIHTSNGMLQALNESDGAIKWTLNLDTPALSLRGESA 200
Query: 85 TGIVVNVTVA-----VVVAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLE 139
+ + V AV G+L+W +I SQ+T G + ++
Sbjct: 201 PAVAFGAAIVGGDNGRVSAVMMEQGQLIWQQRI-----SQVT------------GTTEID 243
Query: 140 EALPADQ----------CCTFRGSLAKLDVRNGRIIWQTYM 170
D + G+L LD+R+G+I+W+ M
Sbjct: 244 RLNDVDTTPVVVDGVVYALAYNGNLTALDLRSGQILWKREM 284
Score = 41.6 bits (96), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 85/197 (43%), Gaps = 40/197 (20%)
Query: 51 VYFPSWNGYLYAVNAFNGALIWE-----QNLSKLTGLSGTGIVVNVTVAVVVAVSRSNGE 105
VY S +YA+N+ +G + W+ + LS+ G ++++ + ++ A++ S+G
Sbjct: 123 VYVGSEKAVVYALNSDDGQIAWQTVVAGEALSRPVASDGV-VLIHTSNGMLQALNESDGA 181
Query: 106 LVWSTQIDPRPRSQITMSG-SVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRI 164
+ W+ +D S S +V GA VG + G ++ + + G++
Sbjct: 182 IKWTLNLDTPALSLRGESAPAVAFGAAIVGGDN--------------GRVSAVMMEQGQL 227
Query: 165 IWQTYMLPDNGGKRGGYSGAAVWGSSPAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSI 224
IWQ + G + ID + N+ T P D + + Y ++
Sbjct: 228 IWQQRISQVTG--------------TTEID-----RLNDVDTTPVVVDGVVYALAYNGNL 268
Query: 225 VALDIDSGRIAWAKPLG 241
ALD+ SG+I W + +G
Sbjct: 269 TALDLRSGQILWKREMG 285
>gi|387815651|ref|YP_005431143.1| Quinoprotein ethanol dehydrogenase precursor (QEDH) [Marinobacter
hydrocarbonoclasticus ATCC 49840]
gi|381340673|emb|CCG96720.1| Quinoprotein ethanol dehydrogenase precursor (QEDH) [Marinobacter
hydrocarbonoclasticus ATCC 49840]
Length = 591
Score = 46.6 bits (109), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 67/333 (20%), Positives = 123/333 (36%), Gaps = 74/333 (22%)
Query: 20 INPVTVRNLRLRWSFYAGKDI----SATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQN 75
+N V+ L+ W+F G + + P V +GV+Y + +YA++A G +W+ +
Sbjct: 59 LNTSNVQYLQPAWAFSFGSEKMRGQESQPLVKDGVMYVTASYSRMYAIDARTGEELWQYD 118
Query: 76 -------------LSKLTGLSGTGIVVNVTVAVVVAVSRSNGELVWSTQI-DPRPRSQIT 121
+++ + G ++ A +VA+++ G+ VW ++ D + IT
Sbjct: 119 ARLPDGIMPCCDVVNRGAAIYGDKVIFGTLDAKLVALNKETGKPVWIKKVADYQAGYAIT 178
Query: 122 MSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQT--------YMLPD 173
+ + G G+S E + G + D G ++W Y+ D
Sbjct: 179 AAPMIVKGKVITGVSGGEFGI--------VGKVEAYDANTGDLVWTRPTVEGHMGYVYKD 230
Query: 174 --------NGGKRG--------GYSGAAVW---GSSPAIDVIRRQKQNNQTTKPTHPDQC 214
+GGK G GAA W P D + N P +
Sbjct: 231 GKKIENGISGGKAGVTWPGEMWKNGGAATWLGGTYDPDTDSLFFGTGN---PAPWNSHLR 287
Query: 215 ISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPML 274
+++++S +A+D D G I W +F P D D +
Sbjct: 288 PGDNLFSSSRLAIDPDDGSIKW----------HFQTT--------PNDGWDYDGVNELIS 329
Query: 275 LTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
NG+ ++GF + +R++GD I
Sbjct: 330 FDYEENGKIVKAAATADRNGFFYVLNRENGDFI 362
>gi|417342952|ref|ZP_12123631.1| Outer membrane protein Yfg [Salmonella enterica subsp. enterica
serovar Baildon str. R6-199]
gi|357955995|gb|EHJ81606.1| Outer membrane protein Yfg [Salmonella enterica subsp. enterica
serovar Baildon str. R6-199]
Length = 405
Score = 46.6 bits (109), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 91/243 (37%), Gaps = 58/243 (23%)
Query: 44 PAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG--------------LSGTGIVV 89
P + + VVY G + A+NA +G IW NL + G ++G + +
Sbjct: 65 PVMVDNVVYAADRAGVVKALNADDGKEIWSVNLGEKDGWFSRSSALLSGGVTVAGGHVYI 124
Query: 90 NVTVAVVVAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCT 149
A V A++ S+G W T++ S+ +S + + T
Sbjct: 125 GSEKAEVYALNTSDGTTAWQTKVAGEALSRPVVSDGIVL------------------IHT 166
Query: 150 FRGSLAKLDVRNGRIIWQTYMLPDNGGKRG------GYSGAAVWGSSPAIDVIRR----- 198
G L L+ +G I W + + RG + A V G + + +
Sbjct: 167 SNGQLQALNQADGAIKWTVNLDMPSLSLRGESAPATAFGAAIVGGDNGRVSAVLMQQGQM 226
Query: 199 --QKQNNQTTKPTHPDQCISSDI-------------YANSIVALDIDSGRIAWAKPLGGY 243
Q++ +Q T PT D+ D Y ++ ALD+ SG+I W + LG
Sbjct: 227 IWQQRISQATGPTEIDRLSDVDTTPVVVNGVVYALAYNGNLTALDLRSGQIMWKRELGSV 286
Query: 244 DIF 246
+ F
Sbjct: 287 NDF 289
Score = 42.7 bits (99), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 61/155 (39%), Gaps = 30/155 (19%)
Query: 32 WSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLS----KLTGLSGTGI 87
W + + P V++G+V + NG L A+N +GA+ W NL L G S
Sbjct: 143 WQTKVAGEALSRPVVSDGIVLIHTSNGQLQALNQADGAIKWTVNLDMPSLSLRGESAPAT 202
Query: 88 VVNVTVA-----VVVAVSRSNGELVWSTQI-------DPRPRSQITMSGSVYMGAFYVGL 135
+ V AV G+++W +I + S + + V G Y
Sbjct: 203 AFGAAIVGGDNGRVSAVLMQQGQMIWQQRISQATGPTEIDRLSDVDTTPVVVNGVVY--- 259
Query: 136 SSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYM 170
+ G+L LD+R+G+I+W+ +
Sbjct: 260 -----------ALAYNGNLTALDLRSGQIMWKREL 283
>gi|147921371|ref|YP_684815.1| hypothetical protein LRC556 [Methanocella arvoryzae MRE50]
gi|110620211|emb|CAJ35489.1| hypothetical protein LRC556 [Methanocella arvoryzae MRE50]
Length = 419
Score = 46.2 bits (108), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 69/317 (21%), Positives = 121/317 (38%), Gaps = 90/317 (28%)
Query: 21 NPVTVRNL---RLRWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLS 77
N +T +L +++W F I TPA+AN + F S++ ++Y V +G+L+W+ +
Sbjct: 78 NALTAADLATGKVQWIFRTDGSIENTPALANDTLVFGSYDSHVYRVRISDGSLVWKTPVG 137
Query: 78 KLTGLSGTGIVVNVTVAV------VVAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAF 131
G+ + +V + V A+ + G +VW + R +Q + +G G
Sbjct: 138 D--GMYSSPLVYDGRVYAGTDGSNFYALDLATGNVVWKLE---RNTTQASPAGD--QGKV 190
Query: 132 YVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQ---------TYMLPDNG---GKRG 179
++G+ G + LD G ++W + M+ D RG
Sbjct: 191 FIGMHD--------------GHVYALDAATGNVVWSYDTASQIHASPMIFDGKVFIATRG 236
Query: 180 GY-------SGAAVWGSSPAIDVIRRQKQNNQTTKPTHPDQ-CISSDIYANSIVALDIDS 231
G SGA +W + D+ R TT P+Q + Y + A D+
Sbjct: 237 GELFAFDEASGAVLWQA----DLGYRA----DTTPSADPEQGTVVVGTYGGYVKAFHADN 288
Query: 232 GRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQ 291
G + WA G PM T++ +G D + V
Sbjct: 289 GTLKWASGFYG-----------------------------PMYSTLTISG---DSIYGVT 316
Query: 292 KSGFAWAFDRDSGDIIW 308
+ G+ +A DR+ G +W
Sbjct: 317 QDGWIFALDREDGSGLW 333
>gi|62181087|ref|YP_217504.1| outer membrane protein assembly complex subunit YfgL [Salmonella
enterica subsp. enterica serovar Choleraesuis str.
SC-B67]
gi|375115428|ref|ZP_09760598.1| putative lipoprotein [Salmonella enterica subsp. enterica serovar
Choleraesuis str. SCSA50]
gi|62128720|gb|AAX66423.1| putative serine/threonine protein kinase [Salmonella enterica
subsp. enterica serovar Choleraesuis str. SC-B67]
gi|322715574|gb|EFZ07145.1| putative lipoprotein [Salmonella enterica subsp. enterica serovar
Choleraesuis str. SCSA50]
Length = 392
Score = 46.2 bits (108), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 91/243 (37%), Gaps = 58/243 (23%)
Query: 44 PAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG--------------LSGTGIVV 89
P + + VVY G + A+NA +G IW NL + G ++G + +
Sbjct: 65 PVMVDNVVYAADRAGVVKALNADDGKEIWSVNLGEKDGWFSRSSALLSGGVTVAGGHVYI 124
Query: 90 NVTVAVVVAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCT 149
A V A++ S+G W T++ S+ +S + + T
Sbjct: 125 GSEKAEVYALNTSDGTTAWQTKVAGEALSRPVVSDGIVL------------------IHT 166
Query: 150 FRGSLAKLDVRNGRIIWQTYMLPDNGGKRG------GYSGAAVWGSSPAIDVIRR----- 198
G L L+ +G I W + + RG + A V G + + +
Sbjct: 167 SNGQLQALNQADGAIKWTVNLDMPSLSLRGESAPATAFGAAIVGGDNGRVSAVLMQQGQM 226
Query: 199 --QKQNNQTTKPTHPDQCISSDI-------------YANSIVALDIDSGRIAWAKPLGGY 243
Q++ +Q T PT D+ D Y ++ ALD+ SG+I W + LG
Sbjct: 227 IWQQRISQATGPTEIDRLSDVDTTPVVVNGVVYALAYNGNLTALDLRSGQIMWKRELGSV 286
Query: 244 DIF 246
+ F
Sbjct: 287 NDF 289
Score = 42.7 bits (99), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 61/155 (39%), Gaps = 30/155 (19%)
Query: 32 WSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLS----KLTGLSGTGI 87
W + + P V++G+V + NG L A+N +GA+ W NL L G S
Sbjct: 143 WQTKVAGEALSRPVVSDGIVLIHTSNGQLQALNQADGAIKWTVNLDMPSLSLRGESAPAT 202
Query: 88 VVNVTVA-----VVVAVSRSNGELVWSTQI-------DPRPRSQITMSGSVYMGAFYVGL 135
+ V AV G+++W +I + S + + V G Y
Sbjct: 203 AFGAAIVGGDNGRVSAVLMQQGQMIWQQRISQATGPTEIDRLSDVDTTPVVVNGVVY--- 259
Query: 136 SSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYM 170
+ G+L LD+R+G+I+W+ +
Sbjct: 260 -----------ALAYNGNLTALDLRSGQIMWKREL 283
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 64/139 (46%), Gaps = 13/139 (9%)
Query: 39 DISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG--LSGTGIVVNVTVAVV 96
D+ TP V NGVVY ++NG L A++ +G ++W++ L + + G I + V
Sbjct: 246 DVDTTPVVVNGVVYALAYNGNLTALDLRSGQIMWKRELGSVNDFIVDGDRIYLVDQNDRV 305
Query: 97 VAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSS--------LEEALPADQCC 148
+A++ G +W TQ D R + S +Y G VG S + A Q
Sbjct: 306 LALATDGGVTLW-TQSDLLHR--LLTSPVLYNGDLVVGDSEGYLHWINVDDGRFVAQQKV 362
Query: 149 TFRGSLAKLDVRNGRIIWQ 167
G L + V +G+++ Q
Sbjct: 363 DSSGFLTEPTVADGKLLIQ 381
>gi|400406434|ref|YP_006589182.1| outer membrane assembly lipoprotein YfgL [secondary endosymbiont of
Heteropsylla cubana]
gi|400364687|gb|AFP85754.1| outer membrane assembly lipoprotein YfgL [secondary endosymbiont of
Heteropsylla cubana]
Length = 394
Score = 46.2 bits (108), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 51/238 (21%), Positives = 100/238 (42%), Gaps = 47/238 (19%)
Query: 27 NLRLRWSFYAGKDI---SATPAVANGVVYFPSWNGYLYAVNAFNGALIWE-----QNLSK 78
NL ++ F++ D+ S A +Y S +Y+++A NG +IWE + LS+
Sbjct: 97 NLFVKKGFFSQNDLTNLSGGLAATASRLYVASELAKVYSLDAKNGTIIWETDIIGEGLSR 156
Query: 79 LTGLSGTGIVVNVTVAVVVAVSRSNGELVWSTQID-PRPRSQITMSGSVYMGAFYVGLSS 137
+S +V++ ++ ++ NG + W+ +D P + + + ++ GA +G
Sbjct: 157 PV-ISNNIVVIHTNNGILQGLNEKNGLVKWTVSLDVPLLKLRGASTPAIAYGAAIIG--- 212
Query: 138 LEEALPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYSGAAVWGSSPAIDVIR 197
+ GS++ + + G +IWQ + P N +
Sbjct: 213 -----------SDNGSISAVMINKGHLIWQRNISPINSS-------------------VE 242
Query: 198 RQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNN 255
N T P + I + + N+ A+D+ SG+I W++ +G F L+ NN
Sbjct: 243 TSHINTVKTTPIIINGVIYTLTHDNNFSAIDLYSGQIIWSREIGPLTNF----LIENN 296
>gi|383786386|ref|YP_005470955.1| WD40-like repeat protein [Fervidobacterium pennivorans DSM 9078]
gi|383109233|gb|AFG34836.1| WD40-like repeat protein [Fervidobacterium pennivorans DSM 9078]
Length = 390
Score = 46.2 bits (108), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 59/126 (46%), Gaps = 13/126 (10%)
Query: 20 INPVTVRNLRLRWSFYAGKDISATPAV-ANGVVYFPSWNGYLYAVNAFNGALIWEQNLSK 78
INP N L+W + I ++PA+ ++G +Y SW+G LYA+N +G L WE N
Sbjct: 222 INP----NGTLKWKYTIDDLIDSSPAIGSDGTIYVGSWDGNLYAINP-DGTLKWEYNTPL 276
Query: 79 LTGLSGTGIVVNVTVAV-----VVAVSRSNGELVWSTQIDPRPRSQ--ITMSGSVYMGAF 131
+ +S I + T+ + + NG L W D S I G++Y G++
Sbjct: 277 IPIISSPAIGSDGTIYIGSVDGTLHAINPNGSLKWKYTTDGFIESSPAIGSDGAIYFGSW 336
Query: 132 YVGLSS 137
G S
Sbjct: 337 DTGSES 342
Score = 40.0 bits (92), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 59/121 (48%), Gaps = 16/121 (13%)
Query: 20 INPVTVRNLRLRWSFYAGKDISATPAV-ANGVVYFPSWNGYLYAVNAFNGALIWEQ---- 74
INP N L+W + G DI ++PA+ ++G +Y S + LYA+N NG L W+
Sbjct: 142 INP----NGTLKWKYTTGSDIWSSPAIGSDGTIYIGSDDNNLYAINP-NGTLKWKYTTGG 196
Query: 75 --NLSKLTGLSGTGIVVNVTVAVVVAVSRSNGELVWSTQIDPRPRSQ--ITMSGSVYMGA 130
+ S G GT I V + A+ NG L W ID S I G++Y+G+
Sbjct: 197 NIHSSPAIGSDGT-IYVGSHDGNLYAI-NPNGTLKWKYTIDDLIDSSPAIGSDGTIYVGS 254
Query: 131 F 131
+
Sbjct: 255 W 255
>gi|341615760|ref|ZP_08702629.1| hypothetical protein CJLT1_12423 [Citromicrobium sp. JLT1363]
Length = 446
Score = 46.2 bits (108), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 57/124 (45%), Gaps = 4/124 (3%)
Query: 6 GDLNNRRYAYGEVLINPVTVRNLRLRWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNA 65
G+L RY G VL R + + DI A P + NG VY G + A
Sbjct: 261 GELVAYRYENGRVLWADALART-SISTEVGSISDIDADPIIDNGRVYALGQGGRMAAYEL 319
Query: 66 FNGALIWEQNLSKLT--GLSGTGIVVNVTVAVVVAVSRSNGELVWSTQIDPRPRSQITMS 123
G IWE NLS ++ L+G + + A ++A++RS G++ W TQ+ R R
Sbjct: 320 VTGQRIWELNLSGISTPALAGEWLFTLTSDARLLAIARSTGKVRWITQLR-RYRDAEDRK 378
Query: 124 GSVY 127
G ++
Sbjct: 379 GEIF 382
Score = 41.6 bits (96), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 67/310 (21%), Positives = 116/310 (37%), Gaps = 76/310 (24%)
Query: 10 NRRYAYGEVLINPVTVRNLRLRWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGA 69
++ Y + + NP V + R+ S + + + A P VANG +Y +G ++A+NA GA
Sbjct: 82 SKSYGHLSLAANPTAVWSQRIEGS-TSSRRLGAAPVVANGTLYAVDTSGTVHAMNAETGA 140
Query: 70 LIWEQN---LSKLTG--------LSGTGIVVNVTVAVVVAVSRSNGELVWSTQIDPRPRS 118
+W+ + S + G ++G + V VVA+ +NG VWS R
Sbjct: 141 RLWQYSPDIASDMRGTVYGGGIAVAGNRLFVTSGTGRVVALDTANGAEVWSANPAGPLRD 200
Query: 119 QITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNGGKR 178
T++ ++ + T + L+ +G I WQ +
Sbjct: 201 APTLAFNLVL------------------VMTQDNRIIALNQNDGEIAWQ---------ES 233
Query: 179 GGYSGAAVWGSSPAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAK 238
G + A V+G P + + + +VA ++GR+ WA
Sbjct: 234 GSLAQAGVFG----------------VASPAAGQGTVVAGYSSGELVAYRYENGRVLWAD 277
Query: 239 PLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWA 298
L I + V + D P +D NGR V A+ + G A
Sbjct: 278 ALARTSI---STEVGSISDIDADPIID--------------NGR----VYALGQGGRMAA 316
Query: 299 FDRDSGDIIW 308
++ +G IW
Sbjct: 317 YELVTGQRIW 326
>gi|224582943|ref|YP_002636741.1| outer membrane protein assembly complex subunit YfgL [Salmonella
enterica subsp. enterica serovar Paratyphi C strain
RKS4594]
gi|224467470|gb|ACN45300.1| putative lipoprotein [Salmonella enterica subsp. enterica serovar
Paratyphi C strain RKS4594]
Length = 390
Score = 46.2 bits (108), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 91/243 (37%), Gaps = 58/243 (23%)
Query: 44 PAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG--------------LSGTGIVV 89
P + + VVY G + A+NA +G IW NL + G ++G + +
Sbjct: 63 PVMVDNVVYAADRAGVVKALNADDGKEIWSVNLGEKDGWFSRSSALLSGGVTVAGGHVYI 122
Query: 90 NVTVAVVVAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCT 149
A V A++ S+G W T++ S+ +S + + T
Sbjct: 123 GSEKAEVYALNTSDGTTAWQTKVAGEALSRPVVSDGIVL------------------IHT 164
Query: 150 FRGSLAKLDVRNGRIIWQTYMLPDNGGKRG------GYSGAAVWGSSPAIDVIRR----- 198
G L L+ +G I W + + RG + A V G + + +
Sbjct: 165 SNGQLQALNQADGAIKWTVNLDMPSLSLRGESAPATAFGAAIVGGDNGRVSAVLMQQGQM 224
Query: 199 --QKQNNQTTKPTHPDQCISSDI-------------YANSIVALDIDSGRIAWAKPLGGY 243
Q++ +Q T PT D+ D Y ++ ALD+ SG+I W + LG
Sbjct: 225 IWQQRISQATGPTEIDRLSDVDTTPVVVNGVVYALAYNGNLTALDLRSGQIMWKRELGSV 284
Query: 244 DIF 246
+ F
Sbjct: 285 NDF 287
Score = 42.7 bits (99), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 61/155 (39%), Gaps = 30/155 (19%)
Query: 32 WSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLS----KLTGLSGTGI 87
W + + P V++G+V + NG L A+N +GA+ W NL L G S
Sbjct: 141 WQTKVAGEALSRPVVSDGIVLIHTSNGQLQALNQADGAIKWTVNLDMPSLSLRGESAPAT 200
Query: 88 VVNVTVA-----VVVAVSRSNGELVWSTQI-------DPRPRSQITMSGSVYMGAFYVGL 135
+ V AV G+++W +I + S + + V G Y
Sbjct: 201 AFGAAIVGGDNGRVSAVLMQQGQMIWQQRISQATGPTEIDRLSDVDTTPVVVNGVVY--- 257
Query: 136 SSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYM 170
+ G+L LD+R+G+I+W+ +
Sbjct: 258 -----------ALAYNGNLTALDLRSGQIMWKREL 281
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 64/139 (46%), Gaps = 13/139 (9%)
Query: 39 DISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG--LSGTGIVVNVTVAVV 96
D+ TP V NGVVY ++NG L A++ +G ++W++ L + + G I + V
Sbjct: 244 DVDTTPVVVNGVVYALAYNGNLTALDLRSGQIMWKRELGSVNDFIVDGDRIYLVDQNDRV 303
Query: 97 VAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSS--------LEEALPADQCC 148
+A++ G +W TQ D R + S +Y G VG S + A Q
Sbjct: 304 LALATDGGVTLW-TQSDLLHR--LLTSPVLYNGDLVVGDSEGYLHWINVDDGRFVAQQKV 360
Query: 149 TFRGSLAKLDVRNGRIIWQ 167
G L + V +G+++ Q
Sbjct: 361 DSSGFLTEPTVADGKLLIQ 379
>gi|448320323|ref|ZP_21509810.1| pyrrolo-quinoline quinone beta-propeller repeat protein
[Natronococcus amylolyticus DSM 10524]
gi|445605788|gb|ELY59703.1| pyrrolo-quinoline quinone beta-propeller repeat protein
[Natronococcus amylolyticus DSM 10524]
Length = 637
Score = 46.2 bits (108), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 69/167 (41%), Gaps = 25/167 (14%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAGKDISATPAVANGVVYFPSWNGYL 60
W + GD + RYA + L W+F + + AV +GVVY + +G +
Sbjct: 44 WPSFDGDAGHARYAADAPEFDG---EALEAAWTF---ERATGEAAVVDGVVYASTPDG-I 96
Query: 61 YAVNAFNGALIWEQNLSKLTGLSGTGIVVNVTVAVVVAVSRSNGELVWSTQIDPRPRSQI 120
A++A +G+ IWE S G V V + A+ ++G++ W T+++P S
Sbjct: 97 VALDAADGSTIWENTDVDANRPSVVGDTVYVVEDELYALDAADGDVRWQTELEPEDSSGT 156
Query: 121 TMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQ 167
Y AF V G+L LD +G + W+
Sbjct: 157 QT--VAYGSAFVVA----------------DGTLYALDTDDGSVRWE 185
>gi|441499353|ref|ZP_20981539.1| protein kinase [Fulvivirga imtechensis AK7]
gi|441436886|gb|ELR70244.1| protein kinase [Fulvivirga imtechensis AK7]
Length = 372
Score = 46.2 bits (108), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 67/147 (45%), Gaps = 29/147 (19%)
Query: 30 LRWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLS---KLTGLSGTG 86
L+W F G + ++P V N ++YF S +G YAV+ G W + + + + G
Sbjct: 26 LKWKFKTGDKVISSPVVYNDLIYFGSEDGNFYAVD-LEGNEKWRLHTAGKIRSKAIIAEG 84
Query: 87 IVVNVTVAVVVAVSRSNGELVW---------STQIDPRPRSQITMSGSVYMGAFYVGLSS 137
I+ + + A++ ++G+ +W + QIDP + SG+++ G YVG SS
Sbjct: 85 ILFFESGNIFYALNPASGKKLWIYDPADTLYANQIDPYDDKR--PSGTLHEGIIYVGSSS 142
Query: 138 LEEALPADQCCTFRGSLAKLDVRNGRI 164
G+L D + G+I
Sbjct: 143 --------------GTLYGFDTKTGKI 155
>gi|16765840|ref|NP_461455.1| outer membrane protein assembly complex subunit YfgL [Salmonella
enterica subsp. enterica serovar Typhimurium str. LT2]
gi|161612722|ref|YP_001586687.1| outer membrane protein assembly complex subunit YfgL [Salmonella
enterica subsp. enterica serovar Paratyphi B str. SPB7]
gi|167991828|ref|ZP_02572927.1| outer membrane assembly lipoprotein YfgL [Salmonella enterica
subsp. enterica serovar 4,[5],12:i:- str. CVM23701]
gi|197261764|ref|ZP_03161838.1| outer membrane assembly lipoprotein YfgL [Salmonella enterica
subsp. enterica serovar Saintpaul str. SARA23]
gi|374981962|ref|ZP_09723284.1| Outer membrane protein YfgL [Salmonella enterica subsp. enterica
serovar Typhimurium str. TN061786]
gi|378445937|ref|YP_005233569.1| putative lipoprotein [Salmonella enterica subsp. enterica serovar
Typhimurium str. D23580]
gi|378451259|ref|YP_005238618.1| outer membrane protein assembly complex subunit YfgL [Salmonella
enterica subsp. enterica serovar Typhimurium str.
14028S]
gi|378700421|ref|YP_005182378.1| putative lipoprotein [Salmonella enterica subsp. enterica serovar
Typhimurium str. SL1344]
gi|378985079|ref|YP_005248234.1| outer membrane protein assembly complex subunit YfgL [Salmonella
enterica subsp. enterica serovar Typhimurium str.
T000240]
gi|378989900|ref|YP_005253064.1| outer membrane protein assembly complex subunit YfgL [Salmonella
enterica subsp. enterica serovar Typhimurium str. UK-1]
gi|379701749|ref|YP_005243477.1| outer membrane protein assembly complex subunit YfgL [Salmonella
enterica subsp. enterica serovar Typhimurium str.
ST4/74]
gi|383497208|ref|YP_005397897.1| lipoprotein [Salmonella enterica subsp. enterica serovar
Typhimurium str. 798]
gi|417519794|ref|ZP_12181850.1| Outer membrane protein YfgL [Salmonella enterica subsp. enterica
serovar Uganda str. R8-3404]
gi|417540936|ref|ZP_12192808.1| Outer membrane protein Yfg [Salmonella enterica subsp. enterica
serovar Wandsworth str. A4-580]
gi|418790865|ref|ZP_13346634.1| outer membrane protein assembly complex subunit YfgL [Salmonella
enterica subsp. enterica serovar Newport str. CVM 19447]
gi|418792020|ref|ZP_13347769.1| outer membrane protein assembly complex subunit YfgL [Salmonella
enterica subsp. enterica serovar Newport str. CVM 19449]
gi|418799209|ref|ZP_13354877.1| outer membrane protein assembly complex subunit YfgL [Salmonella
enterica subsp. enterica serovar Newport str. CVM 19567]
gi|422026814|ref|ZP_16373188.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm1]
gi|422031847|ref|ZP_16377992.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm2]
gi|427552544|ref|ZP_18928485.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm8]
gi|427569101|ref|ZP_18933203.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm9]
gi|427589363|ref|ZP_18937996.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm3]
gi|427612784|ref|ZP_18942858.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm4]
gi|427637090|ref|ZP_18947760.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm6]
gi|427656839|ref|ZP_18952519.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm10]
gi|427662093|ref|ZP_18957431.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm11]
gi|427672714|ref|ZP_18962247.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm12]
gi|427799637|ref|ZP_18967548.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm5]
gi|391737988|sp|H9L451.1|BAMB_SALTY RecName: Full=Outer membrane protein assembly factor BamB; Flags:
Precursor
gi|11127988|gb|AAG31169.1| unknown [Salmonella enterica subsp. enterica serovar Typhimurium]
gi|16421064|gb|AAL21414.1| putative serine/threonine protein kinase [Salmonella enterica
subsp. enterica serovar Typhimurium str. LT2]
gi|161362086|gb|ABX65854.1| hypothetical protein SPAB_00421 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|197240019|gb|EDY22639.1| outer membrane assembly lipoprotein YfgL [Salmonella enterica
subsp. enterica serovar Saintpaul str. SARA23]
gi|205329935|gb|EDZ16699.1| outer membrane assembly lipoprotein YfgL [Salmonella enterica
subsp. enterica serovar 4,[5],12:i:- str. CVM23701]
gi|261247716|emb|CBG25544.1| putative lipoprotein [Salmonella enterica subsp. enterica serovar
Typhimurium str. D23580]
gi|267994637|gb|ACY89522.1| outer membrane protein assembly complex subunit YfgL [Salmonella
enterica subsp. enterica serovar Typhimurium str.
14028S]
gi|301159069|emb|CBW18583.1| hypothetical lipoprotein [Salmonella enterica subsp. enterica
serovar Typhimurium str. SL1344]
gi|312913507|dbj|BAJ37481.1| outer membrane protein assembly complex subunit YfgL [Salmonella
enterica subsp. enterica serovar Typhimurium str.
T000240]
gi|321222779|gb|EFX47850.1| Outer membrane protein YfgL [Salmonella enterica subsp. enterica
serovar Typhimurium str. TN061786]
gi|323130848|gb|ADX18278.1| outer membrane protein assembly complex subunit YfgL [Salmonella
enterica subsp. enterica serovar Typhimurium str.
ST4/74]
gi|332989447|gb|AEF08430.1| outer membrane protein assembly complex subunit YfgL [Salmonella
enterica subsp. enterica serovar Typhimurium str. UK-1]
gi|353645691|gb|EHC89322.1| Outer membrane protein YfgL [Salmonella enterica subsp. enterica
serovar Uganda str. R8-3404]
gi|353661731|gb|EHD00967.1| Outer membrane protein Yfg [Salmonella enterica subsp. enterica
serovar Wandsworth str. A4-580]
gi|380464029|gb|AFD59432.1| putative lipoprotein [Salmonella enterica subsp. enterica serovar
Typhimurium str. 798]
gi|392756901|gb|EJA13795.1| outer membrane protein assembly complex subunit YfgL [Salmonella
enterica subsp. enterica serovar Newport str. CVM 19447]
gi|392764397|gb|EJA21197.1| outer membrane protein assembly complex subunit YfgL [Salmonella
enterica subsp. enterica serovar Newport str. CVM 19567]
gi|392769152|gb|EJA25896.1| outer membrane protein assembly complex subunit YfgL [Salmonella
enterica subsp. enterica serovar Newport str. CVM 19449]
gi|414016806|gb|EKT00565.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm1]
gi|414017596|gb|EKT01303.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm8]
gi|414018300|gb|EKT01963.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm2]
gi|414031047|gb|EKT14125.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm9]
gi|414032529|gb|EKT15532.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm3]
gi|414035746|gb|EKT18603.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm4]
gi|414045814|gb|EKT28181.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm10]
gi|414046450|gb|EKT28777.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm6]
gi|414051398|gb|EKT33501.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm11]
gi|414058559|gb|EKT40219.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm12]
gi|414064196|gb|EKT45186.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm5]
Length = 392
Score = 46.2 bits (108), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 91/243 (37%), Gaps = 58/243 (23%)
Query: 44 PAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG--------------LSGTGIVV 89
P + + VVY G + A+NA +G IW NL + G ++G + +
Sbjct: 65 PVMVDNVVYAADRAGVVKALNADDGKEIWSVNLGEKDGWFSRSSALLSGGVTVAGGHVYI 124
Query: 90 NVTVAVVVAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCT 149
A V A++ S+G W T++ S+ +S + + T
Sbjct: 125 GSEKAEVYALNTSDGTTAWQTKVAGEALSRPVVSDGIVL------------------IHT 166
Query: 150 FRGSLAKLDVRNGRIIWQTYMLPDNGGKRG------GYSGAAVWGSSPAIDVIRR----- 198
G L L+ +G I W + + RG + A V G + + +
Sbjct: 167 SNGQLQALNQADGAIKWTVNLDMPSLSLRGESAPATAFGAAIVGGDNGRVSAVLMQQGQM 226
Query: 199 --QKQNNQTTKPTHPDQCISSDI-------------YANSIVALDIDSGRIAWAKPLGGY 243
Q++ +Q T PT D+ D Y ++ ALD+ SG+I W + LG
Sbjct: 227 IWQQRISQATGPTEIDRLSDVDTTPVVVNGVVYALAYNGNLTALDLRSGQIMWKRELGSV 286
Query: 244 DIF 246
+ F
Sbjct: 287 NDF 289
Score = 42.7 bits (99), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 61/155 (39%), Gaps = 30/155 (19%)
Query: 32 WSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLS----KLTGLSGTGI 87
W + + P V++G+V + NG L A+N +GA+ W NL L G S
Sbjct: 143 WQTKVAGEALSRPVVSDGIVLIHTSNGQLQALNQADGAIKWTVNLDMPSLSLRGESAPAT 202
Query: 88 VVNVTVA-----VVVAVSRSNGELVWSTQI-------DPRPRSQITMSGSVYMGAFYVGL 135
+ V AV G+++W +I + S + + V G Y
Sbjct: 203 AFGAAIVGGDNGRVSAVLMQQGQMIWQQRISQATGPTEIDRLSDVDTTPVVVNGVVY--- 259
Query: 136 SSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYM 170
+ G+L LD+R+G+I+W+ +
Sbjct: 260 -----------ALAYNGNLTALDLRSGQIMWKREL 283
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 64/139 (46%), Gaps = 13/139 (9%)
Query: 39 DISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG--LSGTGIVVNVTVAVV 96
D+ TP V NGVVY ++NG L A++ +G ++W++ L + + G I + V
Sbjct: 246 DVDTTPVVVNGVVYALAYNGNLTALDLRSGQIMWKRELGSVNDFIVDGDRIYLVDQNDRV 305
Query: 97 VAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSS--------LEEALPADQCC 148
+A++ G +W TQ D R + S +Y G VG S + A Q
Sbjct: 306 LALTTDGGVTLW-TQSDLLHR--LLTSPVLYNGDLVVGDSEGYLHWINVDDGRFVAQQKV 362
Query: 149 TFRGSLAKLDVRNGRIIWQ 167
G L + V +G+++ Q
Sbjct: 363 DSSGFLTEPTVADGKLLIQ 381
>gi|390958672|ref|YP_006422429.1| glucose dehydrogenase [Terriglobus roseus DSM 18391]
gi|390413590|gb|AFL89094.1| glucose dehydrogenase [Terriglobus roseus DSM 18391]
Length = 560
Score = 46.2 bits (108), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 71/360 (19%), Positives = 126/360 (35%), Gaps = 81/360 (22%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFY------------------------- 35
W +H GD RRY+ +N +TV+NL W+
Sbjct: 41 WYSHSGDYTARRYS-SLTAVNRLTVKNLTPAWTAKMTQGENPVALTGYSRVRPGSNTGGE 99
Query: 36 -------AGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWE---------QNLSKL 79
+G I AT +G++Y S ++AV+A +G +W S+
Sbjct: 100 SPTGFNSSGGSIKATMLEVDGILY-ASMPDNVWAVDARSGETLWHYYWKARGGTHIASRG 158
Query: 80 TGLSGTGIVVNVTVAVVVAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLE 139
GL + +V++ G+ W +I + + + + + +
Sbjct: 159 VGLWHDYLFFETPDNYLVSLDAKTGKERWHREIAKVEGGYFSTPAPMIVKDHVLAGTGND 218
Query: 140 EALPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNGGKRG----------GYSGAAVW-- 187
PA L D G + W Y+ P G G + G +W
Sbjct: 219 IDAPA--------FLKSYDPETGDLQWTFYVTPQKEGDPGLDTWKSLDAARHGGGNIWMP 270
Query: 188 GSSPAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFY 247
G+ + N T + ++Y S+VALD+D+G++ W Y
Sbjct: 271 GAYDPQTNLYITGTGNPTPSWQTGQRGDGDNLYTCSLVALDVDTGKLKW----------Y 320
Query: 248 FTCLVPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
F+ P D D + P+L+ NGR R + + ++G+ + DR +G+ +
Sbjct: 321 FS--------TSPHDTHDYDSSQVPVLVDGIFNGRPRKMALTASRNGYFFVVDRITGEHL 372
>gi|417708569|ref|ZP_12357600.1| outer membrane assembly lipoprotein YfgL [Shigella flexneri VA-6]
gi|420331958|ref|ZP_14833615.1| outer membrane assembly lipoprotein YfgL [Shigella flexneri K-1770]
gi|333000700|gb|EGK20276.1| outer membrane assembly lipoprotein YfgL [Shigella flexneri VA-6]
gi|391251518|gb|EIQ10733.1| outer membrane assembly lipoprotein YfgL [Shigella flexneri K-1770]
Length = 392
Score = 46.2 bits (108), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 94/226 (41%), Gaps = 24/226 (10%)
Query: 44 PAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG--------------LSGTGIVV 89
PA+A+ VVY G + A+NA +G IW +L++ G +SG + +
Sbjct: 65 PALADNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVSGGHVYI 124
Query: 90 NVTVAVVVAVSRSNGELVWSTQIDPRPRSQITMS-GSVYMGAFYVGLSSLEEALPADQCC 148
A V A++ S+G + W T + S+ +S G V + L +L EA A +
Sbjct: 125 GSEKAQVYALNTSDGTVAWQTTVAGEALSRPVVSDGLVLIHTSNGQLQALNEADGAVK-W 183
Query: 149 TFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYS------GAAVWGS--SPAIDVIRRQK 200
T + L +R + GG G S G +W S A +
Sbjct: 184 TVNLDMPSLSLRGESAPATAFGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDR 243
Query: 201 QNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIF 246
++ T P + + + Y ++ ALD+ SG+I W + LG + F
Sbjct: 244 LSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQIMWKRELGSVNDF 289
Score = 42.0 bits (97), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 63/157 (40%), Gaps = 34/157 (21%)
Query: 32 WSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLS----KLTGLSGTGI 87
W + + P V++G+V + NG L A+N +GA+ W NL L G S
Sbjct: 143 WQTTVAGEALSRPVVSDGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPAT 202
Query: 88 VVNVTVA-----VVVAVSRSNGELVW---------STQIDPRPRSQITMSGSVYMGAFYV 133
V V AV G+++W ST+ID S + + V G +
Sbjct: 203 AFGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEID--RLSDVDTTPVVVNGVVF- 259
Query: 134 GLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYM 170
+ G+L LD+R+G+I+W+ +
Sbjct: 260 -------------ALAYNGNLTALDLRSGQIMWKREL 283
>gi|429190221|ref|YP_007175899.1| WD40-like repeat protein [Natronobacterium gregoryi SP2]
gi|448326132|ref|ZP_21515501.1| pyrrolo-quinoline quinone [Natronobacterium gregoryi SP2]
gi|429134439|gb|AFZ71450.1| WD40-like repeat protein [Natronobacterium gregoryi SP2]
gi|445613041|gb|ELY66752.1| pyrrolo-quinoline quinone [Natronobacterium gregoryi SP2]
Length = 404
Score = 46.2 bits (108), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 113/284 (39%), Gaps = 60/284 (21%)
Query: 27 NLRLRWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTGLSGTG 86
++R RW F K + ++PAV +GVVY S + LYA++A +G W +S +
Sbjct: 74 DVRARWEFPTEKAVYSSPAVVDGVVYVGSNDDSLYAIDADSGDEEWRVRTGDT--VSSSP 131
Query: 87 IVVNVTVAV------VVAVSRSNGELVWSTQIDPRPRSQIT-MSGSVYMGAFYVGLSSLE 139
VV+ TV V V A+ +G W+ Q S T + +VY+G+ L ++
Sbjct: 132 AVVDGTVYVGSHDETVYALEADDGAEEWTFQTGEMVASSPTVVDETVYVGSNDDSLYAI- 190
Query: 140 EALPADQCCTFR--GSLAKLDVRNGRIIWQTYMLPDNGGKRGGY-------SGAAVWGSS 190
+A ++ TF GS+ + +++ G G+ SG VW
Sbjct: 191 DADSGEESWTFETGGSVQRAPAVADGVVY--------AGSTDGFLYAVDAASGEEVWA-- 240
Query: 191 PAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAW---------AKP-- 239
+ + ++P D + +S+ A+D DSG + W + P
Sbjct: 241 -------FETDDWVQSRPAVADGTVYVGSNDDSLYAIDADSGDLHWQFVTEGSVTSSPAV 293
Query: 240 ------LGGYD-IFYFTCLVPNNP--DCPPGPN----LDADFGE 270
+G YD Y + P D P P D DFGE
Sbjct: 294 VDDVVFVGSYDNRLYALSAAADEPEGDREPRPEHFYWYDTDFGE 337
>gi|410624072|ref|ZP_11334880.1| alcohol dehydrogenase [Glaciecola pallidula DSM 14239 = ACAM 615]
gi|410156412|dbj|GAC30254.1| alcohol dehydrogenase [Glaciecola pallidula DSM 14239 = ACAM 615]
Length = 598
Score = 46.2 bits (108), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 68/351 (19%), Positives = 135/351 (38%), Gaps = 75/351 (21%)
Query: 2 LNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAG----KDISATPAVANGVVYFPSWN 57
+ G L +RY+ E IN TV ++R WSF G + + P + NGV++
Sbjct: 44 VTSGMGLKGQRYSTLET-INTSTVEDIRPVWSFSLGGEKQRGQESQPMIKNGVMFVTGSY 102
Query: 58 GYLYAVNAFNGALIWEQN-------------LSKLTGLSGTGIVVNVTVAVVVAVSRSNG 104
++A++A G +W+ + +++ L G ++ A +VA+++ G
Sbjct: 103 SRVFAIDARTGDELWQYDARLPDGIMPCCDVINRGVALYGDLVIFGTLDAKLVALNKDTG 162
Query: 105 ELVWSTQI-DPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGR 163
++VW + D + I+ + + G G++ E + G + + NG
Sbjct: 163 KVVWKKTVEDYKAGYSISAAPIIVKGNVITGIAGGEFGV--------VGKVRAYNATNGD 214
Query: 164 IIWQT--------YMLPDNGGKRGGYSGAA--------VW---GSSPAI--------DVI 196
++W+ Y++ D G SG A +W G++P + D++
Sbjct: 215 LVWERPTVEGHMGYLVKDGKKLENGISGGAPGKTWPADLWKTGGAAPWLGGTYDVDTDLL 274
Query: 197 RRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNP 256
N P + + +++S +A++ D+G I W +F
Sbjct: 275 FFGTGN---PSPWNSHLRPGDNYFSSSRLAINPDTGEIVW----------HFQTT----- 316
Query: 257 DCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
P D D + G+ ++GF + +R++GD I
Sbjct: 317 ---PNDGWDYDGVNEVISFDYDDKGKTIKAAATADRNGFFYVLNRENGDFI 364
>gi|338989026|ref|ZP_08633910.1| Pyrrolo-quinoline quinone [Acidiphilium sp. PM]
gi|338206054|gb|EGO94306.1| Pyrrolo-quinoline quinone [Acidiphilium sp. PM]
Length = 552
Score = 46.2 bits (108), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 68/328 (20%), Positives = 131/328 (39%), Gaps = 57/328 (17%)
Query: 9 NNRRYAYGEVLINPVTVRNLRLRWSFYAGKD--ISATPAVANGVVYFPSWNGYLYAVNAF 66
NNR G+ I P V L+ W+F+ + I A P V +G Y S + ++YA++
Sbjct: 61 NNRYVDIGQ--ITPANVAQLKPVWTFHISDNGPIEAAPVVWDGTAYITSAHDHVYAIDVK 118
Query: 67 NGALIWE--QNLSKLTGLSGTGIVV---NVTVAV----VVAVSRSNGELVW-STQIDPRP 116
G L W+ N ++ + G+ + V +A ++A++ + G+ V+ ++
Sbjct: 119 TGKLKWQFSDNPHVISFAANRGVTLLDGKVYLATLDGHLIALNATTGKKVFDKVEVSDTA 178
Query: 117 RSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNGG 176
S TM Y G + L + G++ ++ NG + W+ +P G
Sbjct: 179 NSFYTMQPLPYTNP-KTGKTVLLLGISNGDWGGI-GTIQAINPANGAVEWKYETIPGPGQ 236
Query: 177 -----------KRGGYSGAAVWGSSPAIDVIRRQKQNNQTTKPTHPD----QCISSDIYA 221
KRGG + + P ++ N Q PD S++Y+
Sbjct: 237 KGNKTWSGDSWKRGGGAVWTMMALDPKTGILYANAGNPQ------PDFNGPARKGSNLYS 290
Query: 222 NSIVALDIDSG--RIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTIST 279
+S++A++I ++ WA +D + ++P P+L T
Sbjct: 291 DSLLAINISGAKPKMVWAHQFIPHDTHDWDPVMP------------------PILFTGKV 332
Query: 280 NGRFRDVVVAVQKSGFAWAFDRDSGDII 307
+G+ +V K+G W + +G ++
Sbjct: 333 DGKEMPLVADGDKAGNFWLLNSQTGKLV 360
>gi|51597154|ref|YP_071345.1| outer membrane protein assembly complex subunit YfgL [Yersinia
pseudotuberculosis IP 32953]
gi|153948388|ref|YP_001400170.1| outer membrane protein assembly complex subunit YfgL [Yersinia
pseudotuberculosis IP 31758]
gi|170023542|ref|YP_001720047.1| outer membrane protein assembly complex subunit YfgL [Yersinia
pseudotuberculosis YPIII]
gi|186896249|ref|YP_001873361.1| outer membrane protein assembly complex subunit YfgL [Yersinia
pseudotuberculosis PB1/+]
gi|51590436|emb|CAH22076.1| putative lipoprotein [Yersinia pseudotuberculosis IP 32953]
gi|152959883|gb|ABS47344.1| putative lipoprotein [Yersinia pseudotuberculosis IP 31758]
gi|169750076|gb|ACA67594.1| outer membrane assembly lipoprotein YfgL [Yersinia
pseudotuberculosis YPIII]
gi|186699275|gb|ACC89904.1| outer membrane assembly lipoprotein YfgL [Yersinia
pseudotuberculosis PB1/+]
Length = 393
Score = 46.2 bits (108), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 64/155 (41%), Gaps = 30/155 (19%)
Query: 29 RLRWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLS----KLTGLSG 84
++ W + + P V++GVV + NG L A+N +GA+ W NL L G S
Sbjct: 141 QVAWQTVVAGEALSRPVVSDGVVLIHTSNGMLQALNESDGAIKWTLNLDTPALSLRGESA 200
Query: 85 TGIVVNVTVA-----VVVAVSRSNGELVWSTQI-------DPRPRSQITMSGSVYMGAFY 132
+ + V AV G+L+W +I + + I ++ V G Y
Sbjct: 201 PAVAFGAAIVGGDNGRVSAVMMEQGQLIWQQRISQVTGATEIDRLNDIDITPVVVDGVVY 260
Query: 133 VGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQ 167
+ G+L LD+R+G+I+W+
Sbjct: 261 --------------ALAYNGNLTALDLRSGQILWK 281
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 54/244 (22%), Positives = 90/244 (36%), Gaps = 59/244 (24%)
Query: 44 PAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTGL---------------SGTGIV 88
PA V+ G + A++A G IW+ +LS+ T SG+ +
Sbjct: 65 PAWQGTSVFAADRKGLVKAMDADTGKQIWQTDLSEKTNFLSSNHSAMLSGGVTASGSHVY 124
Query: 89 VNVTVAVVVAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCC 148
V AVV A++ +G++ W T + S+ +S V +
Sbjct: 125 VGSEKAVVYALNADDGQVAWQTVVAGEALSRPVVSDGVVL------------------IH 166
Query: 149 TFRGSLAKLDVRNGRIIWQTYMLPDNGGKRG------GYSGAAVWGSSPAIDVIRR---- 198
T G L L+ +G I W + RG + A V G + + +
Sbjct: 167 TSNGMLQALNESDGAIKWTLNLDTPALSLRGESAPAVAFGAAIVGGDNGRVSAVMMEQGQ 226
Query: 199 ---QKQNNQTTKPTHPDQCISSDI-------------YANSIVALDIDSGRIAWAKPLGG 242
Q++ +Q T T D+ DI Y ++ ALD+ SG+I W + +G
Sbjct: 227 LIWQQRISQVTGATEIDRLNDIDITPVVVDGVVYALAYNGNLTALDLRSGQILWKREIGS 286
Query: 243 YDIF 246
+ F
Sbjct: 287 VNDF 290
>gi|283786128|ref|YP_003365993.1| dehydrogenase [Citrobacter rodentium ICC168]
gi|282949582|emb|CBG89200.1| putative dehydrogenase [Citrobacter rodentium ICC168]
Length = 392
Score = 46.2 bits (108), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 94/226 (41%), Gaps = 24/226 (10%)
Query: 44 PAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG--------------LSGTGIVV 89
PA+A+ VVY G + A+NA +G IW NL++ G ++G + +
Sbjct: 65 PALADNVVYAADRAGVVKALNADDGKEIWSVNLNEKDGWFSRTPALLSGGVTVAGGHVYL 124
Query: 90 NVTVAVVVAVSRSNGELVWSTQIDPRPRSQ-ITMSGSVYMGAFYVGLSSLEEALPADQCC 148
A V A++ ++G + W T++ S+ + G V + L +L EA A +
Sbjct: 125 GSEKAQVYALNAADGTVAWQTKVAGEALSRPVVSDGLVLVHTSNGQLQALNEADGAIK-W 183
Query: 149 TFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYS------GAAVWGS--SPAIDVIRRQK 200
T + L +R + GG G S G +W S A +
Sbjct: 184 TVNLDMPSLSLRGESAPATAFGAAIVGGDNGRVSAVLMQQGQMIWQQRISQATGSTEIDR 243
Query: 201 QNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIF 246
++ T P + + + Y ++ ALD+ SG+I W + LG + F
Sbjct: 244 LSDVDTTPVIVNGVVYALAYNGNLTALDLRSGQIMWKRELGSVNDF 289
Score = 42.7 bits (99), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 63/157 (40%), Gaps = 34/157 (21%)
Query: 32 WSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLS----KLTGLSGTGI 87
W + + P V++G+V + NG L A+N +GA+ W NL L G S
Sbjct: 143 WQTKVAGEALSRPVVSDGLVLVHTSNGQLQALNEADGAIKWTVNLDMPSLSLRGESAPAT 202
Query: 88 VVNVTVA-----VVVAVSRSNGELVW---------STQIDPRPRSQITMSGSVYMGAFYV 133
+ V AV G+++W ST+ID S + + + G Y
Sbjct: 203 AFGAAIVGGDNGRVSAVLMQQGQMIWQQRISQATGSTEID--RLSDVDTTPVIVNGVVY- 259
Query: 134 GLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYM 170
+ G+L LD+R+G+I+W+ +
Sbjct: 260 -------------ALAYNGNLTALDLRSGQIMWKREL 283
Score = 40.0 bits (92), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 62/134 (46%), Gaps = 19/134 (14%)
Query: 39 DISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG--LSGTGIVVNVTVAVV 96
D+ TP + NGVVY ++NG L A++ +G ++W++ L + + G I + +
Sbjct: 246 DVDTTPVIVNGVVYALAYNGNLTALDLRSGQIMWKRELGSVNDFIVEGDRIYLVDQNDRI 305
Query: 97 VAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAK 156
+A++ G +W TQ D R + S +Y G VG S G L
Sbjct: 306 LALTTDGGVTLW-TQSDLLHR--LLTSPVLYNGNLVVGDS--------------EGYLHW 348
Query: 157 LDVRNGRIIWQTYM 170
++V +GR + Q +
Sbjct: 349 INVDDGRFVAQQEL 362
>gi|224536466|ref|ZP_03677005.1| hypothetical protein BACCELL_01340 [Bacteroides cellulosilyticus
DSM 14838]
gi|224521908|gb|EEF91013.1| hypothetical protein BACCELL_01340 [Bacteroides cellulosilyticus
DSM 14838]
Length = 619
Score = 46.2 bits (108), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 65/291 (22%), Positives = 117/291 (40%), Gaps = 37/291 (12%)
Query: 25 VRNLRLRWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTGLSG 84
++N + W+F +GK I TPA A+G+V F S + +Y +N+ +G L+W
Sbjct: 323 LKNGKKLWNFQSGKRIVGTPAAADGIVVFGSADRNIYGLNSKDGKLLW------------ 370
Query: 85 TGIVVNVTVAVVVAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALP- 143
V V+ AV+ NG + + + R+ ++G V Y G+ E P
Sbjct: 371 ---TVKAKAPVLGAVTIENG-IAYIGASNSTFRAIDILTGKVLWA--YTGVKGYIETKPL 424
Query: 144 --ADQCC--TFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYSGAAVWGSSPAIDVIRRQ 199
AD+ + +L L+ +G+ +W+ G R +S AAVW + V
Sbjct: 425 VTADKVIFGAWDNTLYALNKADGKELWKW----TGGLTRMHFSPAAVWPVAAEGKVFITD 480
Query: 200 KQNNQTTKPTHPDQCI--SSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPD 257
Q T + + + + L D R+ ++K + + Y T + P
Sbjct: 481 PQRAMTAINIENGETVWRTFQSMVRETIGLSEDGTRV-FSKTMNDSIVCYATQ--GDQPR 537
Query: 258 CPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDIIW 308
N+ + AP + + G V+ K G +A + +G ++W
Sbjct: 538 ELWASNVGFGYEHAPS-MQVEKGG----VMFGSTKEGLIFALEAQTGKVLW 583
>gi|60679962|ref|YP_210106.1| PQQ-binding phosphoesterase [Bacteroides fragilis NCTC 9343]
gi|375356818|ref|YP_005109590.1| putative PQQ-binding exported phosphoesterase [Bacteroides fragilis
638R]
gi|383116729|ref|ZP_09937477.1| hypothetical protein BSHG_1185 [Bacteroides sp. 3_2_5]
gi|60491396|emb|CAH06145.1| putative PQQ-binding exported phosphoesterase [Bacteroides fragilis
NCTC 9343]
gi|251947984|gb|EES88266.1| hypothetical protein BSHG_1185 [Bacteroides sp. 3_2_5]
gi|301161499|emb|CBW21039.1| putative PQQ-binding exported phosphoesterase [Bacteroides fragilis
638R]
Length = 621
Score = 46.2 bits (108), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 63/297 (21%), Positives = 116/297 (39%), Gaps = 47/297 (15%)
Query: 24 TVRNLRLRWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSK----- 78
T++ R WSF +GK I TPA +G+V F S + +Y ++A G W +++
Sbjct: 324 TLKEGRKLWSFQSGKRIVGTPAATDGIVVFGSADHNIYGLDAVTGKERWRVTVAQPVLGA 383
Query: 79 LTGLSGTGIVVNVTVAVVVAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSL 138
+T G + + + A+ NG++VW+ Y G+
Sbjct: 384 VTIEKGIA-YIGGSDSTFRAIRIKNGKVVWT----------------------YTGIKGY 420
Query: 139 EEALP---ADQCC--TFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYSGAAVWGSSPAI 193
E P D+ + +L L+ NG+ +W+ G R +S AAVW +
Sbjct: 421 IETKPLVEGDKVIFGAWDNTLYALNKSNGKELWKW----TGGLTRMHFSPAAVWPVAAHG 476
Query: 194 DVIRRQKQNNQTTKPTHPDQCI--SSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCL 251
V Q T + + + + L + +I ++K + + Y T
Sbjct: 477 KVFITDPQRAMTAISLKTGKTVWRTFQSMVRETIGLSANKNQI-YSKTMNDSVVCYST-- 533
Query: 252 VPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDIIW 308
+ + P N+ + AP + + +G +V + K G +A D +G ++W
Sbjct: 534 ISDTPKEIWASNVGFGYEHAPS-MQMEKDG----IVFSSTKEGLIFALDASTGQVLW 585
>gi|392413546|ref|YP_006450153.1| PQQ enzyme repeat-containing protein [Desulfomonile tiedjei DSM
6799]
gi|390626682|gb|AFM27889.1| PQQ enzyme repeat-containing protein [Desulfomonile tiedjei DSM
6799]
Length = 462
Score = 46.2 bits (108), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 34/57 (59%)
Query: 16 GEVLINPVTVRNLRLRWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIW 72
G+ + V +R+ + RWSF G I++ PA+ GVVYF S + ++YAV+ G W
Sbjct: 334 GDRHMYAVDIRSGKERWSFRTGDKITSCPAIVGGVVYFGSADKHVYAVDVRTGLDKW 390
Score = 41.6 bits (96), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 31/54 (57%)
Query: 20 INPVTVRNLRLRWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWE 73
+ V VR +WSF G + ++P VAN ++YF S + +LYA+ G +W+
Sbjct: 378 VYAVDVRTGLDKWSFETGSAVYSSPTVANEMIYFGSGDKHLYALEMKTGRELWK 431
Score = 39.7 bits (91), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 27/42 (64%)
Query: 32 WSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWE 73
W F AG I ++ ++ + VVYF + NG LY VNA +G +++
Sbjct: 190 WQFNAGSSIYSSCSLLDSVVYFGTLNGTLYGVNALDGKAVFQ 231
Score = 39.3 bits (90), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 53/105 (50%), Gaps = 9/105 (8%)
Query: 25 VRNL-RLRWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTGLS 83
VR L L+W + G +SA+PAV++ V+ S +G LY ++ +G IW+ N +
Sbjct: 142 VRELTELKWRYKTGGWVSASPAVSSAGVFVGSLDGNLYLLDEDSGRPIWQFN-------A 194
Query: 84 GTGIVVNVTVA-VVVAVSRSNGELVWSTQIDPRPRSQITMSGSVY 127
G+ I + ++ VV NG L +D + Q + +G +Y
Sbjct: 195 GSSIYSSCSLLDSVVYFGTLNGTLYGVNALDGKAVFQFSTAGPIY 239
>gi|53711726|ref|YP_097718.1| serine/threonine protein kinase-like protein [Bacteroides fragilis
YCH46]
gi|52214591|dbj|BAD47184.1| serine/threonine protein kinase related protein [Bacteroides
fragilis YCH46]
Length = 621
Score = 46.2 bits (108), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 63/297 (21%), Positives = 116/297 (39%), Gaps = 47/297 (15%)
Query: 24 TVRNLRLRWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSK----- 78
T++ R WSF +GK I TPA +G+V F S + +Y ++A G W +++
Sbjct: 324 TLKEGRKLWSFQSGKRIVGTPAATDGIVVFGSADHNIYGLDAVTGKERWRVTVAQPVLGA 383
Query: 79 LTGLSGTGIVVNVTVAVVVAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSL 138
+T G + + + A+ NG++VW+ Y G+
Sbjct: 384 VTIEKGIA-YIGGSDSTFRAIRIKNGKVVWT----------------------YTGIKGY 420
Query: 139 EEALP---ADQCC--TFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYSGAAVWGSSPAI 193
E P D+ + +L L+ NG+ +W+ G R +S AAVW +
Sbjct: 421 IETKPLVEGDKVIFGAWDNTLYALNKSNGKELWKW----TGGLTRMHFSPAAVWPVAAHG 476
Query: 194 DVIRRQKQNNQTTKPTHPDQCI--SSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCL 251
V Q T + + + + L + +I ++K + + Y T
Sbjct: 477 KVFITDPQRAMTAISLKTGKTVWRTFQSMVRETIGLSANKNQI-YSKTMNDSVVCYST-- 533
Query: 252 VPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDIIW 308
+ + P N+ + AP + + +G +V + K G +A D +G ++W
Sbjct: 534 ISDTPKEIWASNVGFGYEHAPS-MQMEKDG----IVFSSTKEGLIFALDASTGQVLW 585
>gi|326405276|ref|YP_004285358.1| alcohol dehydrogenase [Acidiphilium multivorum AIU301]
gi|325052138|dbj|BAJ82476.1| alcohol dehydrogenase [Acidiphilium multivorum AIU301]
Length = 552
Score = 46.2 bits (108), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 68/328 (20%), Positives = 131/328 (39%), Gaps = 57/328 (17%)
Query: 9 NNRRYAYGEVLINPVTVRNLRLRWSFYAGKD--ISATPAVANGVVYFPSWNGYLYAVNAF 66
NNR G+ I P V L+ W+F+ + I A P V +G Y S + ++YA++
Sbjct: 61 NNRYVDIGQ--ITPANVAQLKPVWTFHISDNGPIEAAPVVWDGTAYITSAHDHVYAIDVK 118
Query: 67 NGALIWE--QNLSKLTGLSGTGIVV---NVTVAV----VVAVSRSNGELVW-STQIDPRP 116
G L W+ N ++ + G+ + V +A ++A++ + G+ V+ ++
Sbjct: 119 TGKLKWQFSDNPHVISFAANRGVTLLDGKVYLATLDGHLIALNATTGKKVFDKVEVSDTA 178
Query: 117 RSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNGG 176
S TM Y G + L + G++ ++ NG + W+ +P G
Sbjct: 179 NSFYTMQPLPYTNP-KTGKTVLLLGISNGDWGGI-GTIQAINPANGAVEWKYETIPGPGQ 236
Query: 177 -----------KRGGYSGAAVWGSSPAIDVIRRQKQNNQTTKPTHPD----QCISSDIYA 221
KRGG + + P ++ N Q PD S++Y+
Sbjct: 237 KGNKTWSGDSWKRGGGAVWTMMALDPKTGILYANAGNPQ------PDFNGPARKGSNLYS 290
Query: 222 NSIVALDIDSG--RIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTIST 279
+S++A++I ++ WA +D + ++P P+L T
Sbjct: 291 DSLLAINISGAKPKMVWAHQFIPHDTHDWDPVMP------------------PILFTGKV 332
Query: 280 NGRFRDVVVAVQKSGFAWAFDRDSGDII 307
+G+ +V K+G W + +G ++
Sbjct: 333 DGKEMPLVADGDKAGNFWLLNSQTGKLV 360
>gi|282877739|ref|ZP_06286554.1| PQQ enzyme repeat protein [Prevotella buccalis ATCC 35310]
gi|281300311|gb|EFA92665.1| PQQ enzyme repeat protein [Prevotella buccalis ATCC 35310]
Length = 619
Score = 46.2 bits (108), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 44/83 (53%), Gaps = 6/83 (7%)
Query: 32 WSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQN-----LSKLTGLSGTG 86
W++ +G I TPAV NG+V F S + Y+Y ++A NG+L W L +T G
Sbjct: 331 WAYQSGNRIVGTPAVENGIVVFGSADQYIYGIDAKNGSLKWRVQAEAPVLGAVTIQQGIA 390
Query: 87 IVVNVTVAVVVAVSRSNGELVWS 109
+ + + A+ NG++VW+
Sbjct: 391 -YIGSSDHIFRAIDIQNGKVVWT 412
>gi|156742137|ref|YP_001432266.1| serine/threonine protein kinase [Roseiflexus castenholzii DSM
13941]
gi|156233465|gb|ABU58248.1| serine/threonine protein kinase [Roseiflexus castenholzii DSM
13941]
Length = 652
Score = 46.2 bits (108), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 33/51 (64%)
Query: 23 VTVRNLRLRWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWE 73
+ ++N +L W + G I+++P V G VYF + +G +Y ++A NG+LIW
Sbjct: 570 IELKNGKLAWKYDTGSQITSSPRVEQGRVYFGAADGCVYCLDAANGSLIWR 620
Score = 45.8 bits (107), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 66/156 (42%), Gaps = 22/156 (14%)
Query: 16 GEVLINPVTVRNLRLRWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQN 75
G+ + + ++N +RW + + ++PA A +V S + LYA+++ G +W+
Sbjct: 483 GDGFVYALNIKNGGVRWKQRTQQPVISSPAFAENMVIVGSMDHMLYALDSEGGWPVWKYR 542
Query: 76 LSKLTGLS----GTGIVVNVTVAVVVAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAF 131
+ S GT + V + A+ NG+L W SQIT S V G
Sbjct: 543 TNHYVNSSPFVFGTRVFVGSVDGNLYAIELKNGKLAWKYDTG----SQITSSPRVEQGRV 598
Query: 132 YVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQ 167
Y G AD C + LD NG +IW+
Sbjct: 599 YFG--------AADGC------VYCLDAANGSLIWR 620
Score = 41.2 bits (95), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 28/49 (57%)
Query: 25 VRNLRLRWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWE 73
+R LRW+F K + A+P V V++ S + + YA++ GA IW+
Sbjct: 412 IRRGALRWTFRTSKPVRASPRVLERVIFIGSDDQHFYAIDGLRGAQIWK 460
>gi|334345751|ref|YP_004554303.1| PQQ-dependent dehydrogenase methanol/ethanol family protein
[Sphingobium chlorophenolicum L-1]
gi|334102373|gb|AEG49797.1| PQQ-dependent dehydrogenase, methanol/ethanol family [Sphingobium
chlorophenolicum L-1]
Length = 704
Score = 46.2 bits (108), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 65/303 (21%), Positives = 113/303 (37%), Gaps = 65/303 (21%)
Query: 44 PAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTGLSGT---------------GIV 88
P GV+Y+ + + AVNA G +W + ++T G G +
Sbjct: 95 PLEVGGVLYYTTGYSVITAVNAATGKELWRYD-PQVTDEIGEKQRASWGPRGIAYWNGKI 153
Query: 89 VNVTVA-VVVAVSRSNGELVWSTQIDPRPRSQITMSGS--VYMGAFYVGLSSLEEALPAD 145
+ T+ + AVS + G+L+WS P +SG+ V+ G +G +
Sbjct: 154 IAPTLGGRLFAVSAATGKLLWSQDTTEGPEDGRFISGAPRVFRGKVIIGHGGAD------ 207
Query: 146 QCCTFRGSLAKLDVRNGRIIWQTYMLP--------DNGGKRGGYS----------GAAVW 187
RG + + G +W+ + +P D+ +R + G W
Sbjct: 208 -TGNVRGYVTAYNADTGARMWRFHTVPGNPADGFEDDAQRRAAKTWRGEWWKLGGGGTAW 266
Query: 188 GS---SPAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYD 244
S +D I N +++ +S+VALD ++G+ W
Sbjct: 267 NSFTYDAELDRIYVGTGNGAPWNQNIRSPGGGDNLFLSSVVALDANTGKYIW-------- 318
Query: 245 IFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSG 304
Y T PG D + L T+ +G+ R +++ K+GF + DRDSG
Sbjct: 319 -HYQTN---------PGETWDFNSTMDMTLATVDIDGKSRRILMHAPKNGFFYVLDRDSG 368
Query: 305 DII 307
+I
Sbjct: 369 KLI 371
>gi|423282305|ref|ZP_17261190.1| hypothetical protein HMPREF1204_00728 [Bacteroides fragilis HMW
615]
gi|404581873|gb|EKA86568.1| hypothetical protein HMPREF1204_00728 [Bacteroides fragilis HMW
615]
Length = 621
Score = 46.2 bits (108), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 63/297 (21%), Positives = 116/297 (39%), Gaps = 47/297 (15%)
Query: 24 TVRNLRLRWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSK----- 78
T++ R WSF +GK I TPA +G+V F S + +Y ++A G W +++
Sbjct: 324 TLKEGRKLWSFQSGKRIVGTPAATDGIVVFGSADHNIYGLDAVTGKERWRVTVAQPVLGA 383
Query: 79 LTGLSGTGIVVNVTVAVVVAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSL 138
+T G + + + A+ NG++VW+ Y G+
Sbjct: 384 VTIEKGIA-YIGGSDSTFRAIRIKNGKVVWT----------------------YTGIKGY 420
Query: 139 EEALP---ADQCC--TFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYSGAAVWGSSPAI 193
E P D+ + +L L+ NG+ +W+ G R +S AAVW +
Sbjct: 421 IETKPLVEGDKVIFGAWDNTLYALNKSNGKELWKW----TGGLTRMHFSPAAVWPVAAHG 476
Query: 194 DVIRRQKQNNQTTKPTHPDQCI--SSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCL 251
V Q T + + + + L + +I ++K + + Y T
Sbjct: 477 KVFITDPQRAMTAISLKTGKTVWRTFQSMVRETIGLSANKNQI-YSKTMNDSVVCYST-- 533
Query: 252 VPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDIIW 308
+ + P N+ + AP + + +G +V + K G +A D +G ++W
Sbjct: 534 ISDTPKEIWASNVGFGYEHAPS-MQMEKDG----IVFSSTKEGLIFALDASTGQVLW 585
>gi|22125255|ref|NP_668678.1| outer membrane protein assembly complex subunit YfgL [Yersinia
pestis KIM10+]
gi|45442514|ref|NP_994053.1| outer membrane protein assembly complex subunit YfgL [Yersinia
pestis biovar Microtus str. 91001]
gi|108808310|ref|YP_652226.1| outer membrane protein assembly complex subunit YfgL [Yersinia
pestis Antiqua]
gi|108811425|ref|YP_647192.1| outer membrane protein assembly complex subunit YfgL [Yersinia
pestis Nepal516]
gi|145599493|ref|YP_001163569.1| outer membrane protein assembly complex subunit YfgL [Yersinia
pestis Pestoides F]
gi|149365336|ref|ZP_01887371.1| putative lipoprotein [Yersinia pestis CA88-4125]
gi|162420773|ref|YP_001605021.1| outer membrane protein assembly complex subunit YfgL [Yersinia
pestis Angola]
gi|165925914|ref|ZP_02221746.1| putative lipoprotein [Yersinia pestis biovar Orientalis str.
F1991016]
gi|165937179|ref|ZP_02225744.1| putative lipoprotein [Yersinia pestis biovar Orientalis str. IP275]
gi|166008179|ref|ZP_02229077.1| putative lipoprotein [Yersinia pestis biovar Antiqua str. E1979001]
gi|166212407|ref|ZP_02238442.1| putative lipoprotein [Yersinia pestis biovar Antiqua str.
B42003004]
gi|167399659|ref|ZP_02305183.1| putative lipoprotein [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|167421455|ref|ZP_02313208.1| putative lipoprotein [Yersinia pestis biovar Orientalis str.
MG05-1020]
gi|167423653|ref|ZP_02315406.1| putative lipoprotein [Yersinia pestis biovar Mediaevalis str.
K1973002]
gi|167470077|ref|ZP_02334781.1| putative lipoprotein [Yersinia pestis FV-1]
gi|218929936|ref|YP_002347811.1| outer membrane protein assembly complex subunit YfgL [Yersinia
pestis CO92]
gi|229838455|ref|ZP_04458614.1| protein assembly complex, lipoprotein component [Yersinia pestis
biovar Orientalis str. PEXU2]
gi|229895157|ref|ZP_04510333.1| protein assembly complex, lipoprotein component [Yersinia pestis
Pestoides A]
gi|229899022|ref|ZP_04514166.1| protein assembly complex, lipoprotein component [Yersinia pestis
biovar Orientalis str. India 195]
gi|229901682|ref|ZP_04516804.1| protein assembly complex, lipoprotein component [Yersinia pestis
Nepal516]
gi|270489877|ref|ZP_06206951.1| outer membrane assembly lipoprotein YfgL [Yersinia pestis KIM D27]
gi|294504562|ref|YP_003568624.1| putative lipoprotein [Yersinia pestis Z176003]
gi|384122847|ref|YP_005505467.1| putative lipoprotein [Yersinia pestis D106004]
gi|384126886|ref|YP_005509500.1| putative lipoprotein [Yersinia pestis D182038]
gi|384139291|ref|YP_005521993.1| outer membrane biogenesis protein BamB [Yersinia pestis A1122]
gi|384415508|ref|YP_005624870.1| protein assembly complex, lipoprotein component [Yersinia pestis
biovar Medievalis str. Harbin 35]
gi|420547918|ref|ZP_15045766.1| outer membrane assembly lipoprotein YfgL [Yersinia pestis PY-01]
gi|420553231|ref|ZP_15050518.1| outer membrane assembly lipoprotein YfgL [Yersinia pestis PY-02]
gi|420558799|ref|ZP_15055385.1| outer membrane assembly lipoprotein YfgL [Yersinia pestis PY-03]
gi|420564247|ref|ZP_15060240.1| outer membrane assembly lipoprotein YfgL [Yersinia pestis PY-04]
gi|420569281|ref|ZP_15064815.1| outer membrane assembly lipoprotein YfgL [Yersinia pestis PY-05]
gi|420574953|ref|ZP_15069944.1| outer membrane assembly lipoprotein YfgL [Yersinia pestis PY-06]
gi|420580276|ref|ZP_15074781.1| outer membrane assembly lipoprotein YfgL [Yersinia pestis PY-07]
gi|420585606|ref|ZP_15079613.1| outer membrane assembly lipoprotein YfgL [Yersinia pestis PY-08]
gi|420590727|ref|ZP_15084219.1| outer membrane assembly lipoprotein YfgL [Yersinia pestis PY-09]
gi|420596110|ref|ZP_15089062.1| outer membrane assembly lipoprotein YfgL [Yersinia pestis PY-10]
gi|420601762|ref|ZP_15094094.1| outer membrane assembly lipoprotein YfgL [Yersinia pestis PY-11]
gi|420607211|ref|ZP_15099010.1| outer membrane assembly lipoprotein YfgL [Yersinia pestis PY-12]
gi|420612587|ref|ZP_15103837.1| outer membrane assembly lipoprotein YfgL [Yersinia pestis PY-13]
gi|420617961|ref|ZP_15108542.1| outer membrane assembly lipoprotein YfgL [Yersinia pestis PY-14]
gi|420623272|ref|ZP_15113305.1| outer membrane assembly lipoprotein YfgL [Yersinia pestis PY-15]
gi|420628347|ref|ZP_15117913.1| outer membrane assembly lipoprotein YfgL [Yersinia pestis PY-16]
gi|420633477|ref|ZP_15122514.1| outer membrane assembly lipoprotein YfgL [Yersinia pestis PY-19]
gi|420638679|ref|ZP_15127194.1| outer membrane assembly lipoprotein YfgL [Yersinia pestis PY-25]
gi|420644185|ref|ZP_15132207.1| outer membrane assembly lipoprotein YfgL [Yersinia pestis PY-29]
gi|420649435|ref|ZP_15136960.1| outer membrane assembly lipoprotein YfgL [Yersinia pestis PY-32]
gi|420655090|ref|ZP_15142047.1| outer membrane assembly lipoprotein YfgL [Yersinia pestis PY-34]
gi|420660562|ref|ZP_15146953.1| outer membrane assembly lipoprotein YfgL [Yersinia pestis PY-36]
gi|420665880|ref|ZP_15151726.1| outer membrane assembly lipoprotein YfgL [Yersinia pestis PY-42]
gi|420670740|ref|ZP_15156145.1| outer membrane assembly lipoprotein YfgL [Yersinia pestis PY-45]
gi|420676095|ref|ZP_15161018.1| outer membrane assembly lipoprotein YfgL [Yersinia pestis PY-46]
gi|420681700|ref|ZP_15166091.1| outer membrane assembly lipoprotein YfgL [Yersinia pestis PY-47]
gi|420687017|ref|ZP_15170822.1| outer membrane assembly lipoprotein YfgL [Yersinia pestis PY-48]
gi|420692233|ref|ZP_15175407.1| outer membrane assembly lipoprotein YfgL [Yersinia pestis PY-52]
gi|420697998|ref|ZP_15180477.1| outer membrane assembly lipoprotein YfgL [Yersinia pestis PY-53]
gi|420703751|ref|ZP_15185103.1| outer membrane assembly lipoprotein YfgL [Yersinia pestis PY-54]
gi|420709215|ref|ZP_15189873.1| outer membrane assembly lipoprotein YfgL [Yersinia pestis PY-55]
gi|420714661|ref|ZP_15194732.1| outer membrane assembly lipoprotein YfgL [Yersinia pestis PY-56]
gi|420720162|ref|ZP_15199467.1| outer membrane assembly lipoprotein YfgL [Yersinia pestis PY-58]
gi|420725649|ref|ZP_15204274.1| outer membrane assembly lipoprotein YfgL [Yersinia pestis PY-59]
gi|420731263|ref|ZP_15209310.1| outer membrane assembly lipoprotein YfgL [Yersinia pestis PY-60]
gi|420736298|ref|ZP_15213861.1| outer membrane assembly lipoprotein YfgL [Yersinia pestis PY-61]
gi|420741741|ref|ZP_15218752.1| outer membrane assembly lipoprotein YfgL [Yersinia pestis PY-63]
gi|420747413|ref|ZP_15223574.1| outer membrane assembly lipoprotein YfgL [Yersinia pestis PY-64]
gi|420752901|ref|ZP_15228440.1| outer membrane assembly lipoprotein YfgL [Yersinia pestis PY-65]
gi|420758591|ref|ZP_15233077.1| outer membrane assembly lipoprotein YfgL [Yersinia pestis PY-66]
gi|420763941|ref|ZP_15237711.1| outer membrane assembly lipoprotein YfgL [Yersinia pestis PY-71]
gi|420769167|ref|ZP_15242403.1| outer membrane assembly lipoprotein YfgL [Yersinia pestis PY-72]
gi|420774157|ref|ZP_15246914.1| outer membrane assembly lipoprotein YfgL [Yersinia pestis PY-76]
gi|420779765|ref|ZP_15251862.1| outer membrane assembly lipoprotein YfgL [Yersinia pestis PY-88]
gi|420785343|ref|ZP_15256744.1| outer membrane assembly lipoprotein YfgL [Yersinia pestis PY-89]
gi|420790515|ref|ZP_15261378.1| outer membrane assembly lipoprotein YfgL [Yersinia pestis PY-90]
gi|420796032|ref|ZP_15266338.1| outer membrane assembly lipoprotein YfgL [Yersinia pestis PY-91]
gi|420801091|ref|ZP_15270880.1| outer membrane assembly lipoprotein YfgL [Yersinia pestis PY-92]
gi|420806459|ref|ZP_15275738.1| outer membrane assembly lipoprotein YfgL [Yersinia pestis PY-93]
gi|420811796|ref|ZP_15280541.1| outer membrane assembly lipoprotein YfgL [Yersinia pestis PY-94]
gi|420817339|ref|ZP_15285539.1| outer membrane assembly lipoprotein YfgL [Yersinia pestis PY-95]
gi|420822640|ref|ZP_15290299.1| outer membrane assembly lipoprotein YfgL [Yersinia pestis PY-96]
gi|420827723|ref|ZP_15294864.1| outer membrane assembly lipoprotein YfgL [Yersinia pestis PY-98]
gi|420833403|ref|ZP_15299997.1| outer membrane assembly lipoprotein YfgL [Yersinia pestis PY-99]
gi|420838278|ref|ZP_15304406.1| outer membrane assembly lipoprotein YfgL [Yersinia pestis PY-100]
gi|420843466|ref|ZP_15309107.1| outer membrane assembly lipoprotein YfgL [Yersinia pestis PY-101]
gi|420849123|ref|ZP_15314194.1| outer membrane assembly lipoprotein YfgL [Yersinia pestis PY-102]
gi|420854740|ref|ZP_15318982.1| outer membrane assembly lipoprotein YfgL [Yersinia pestis PY-103]
gi|420859982|ref|ZP_15323570.1| outer membrane assembly lipoprotein YfgL [Yersinia pestis PY-113]
gi|421764380|ref|ZP_16201172.1| outer membrane biogenesis protein BamB [Yersinia pestis INS]
gi|123776896|sp|Q7CJM5.1|BAMB_YERPE RecName: Full=Outer membrane protein assembly factor BamB; Flags:
Precursor
gi|21958126|gb|AAM84929.1|AE013738_6 putative dehydrogenase [Yersinia pestis KIM10+]
gi|45437379|gb|AAS62930.1| putative lipoprotein [Yersinia pestis biovar Microtus str. 91001]
gi|108775073|gb|ABG17592.1| lipoprotein [Yersinia pestis Nepal516]
gi|108780223|gb|ABG14281.1| putative lipoprotein [Yersinia pestis Antiqua]
gi|115348547|emb|CAL21487.1| putative lipoprotein [Yersinia pestis CO92]
gi|145211189|gb|ABP40596.1| lipoprotein [Yersinia pestis Pestoides F]
gi|149291749|gb|EDM41823.1| putative lipoprotein [Yersinia pestis CA88-4125]
gi|162353588|gb|ABX87536.1| putative lipoprotein [Yersinia pestis Angola]
gi|165915042|gb|EDR33654.1| putative lipoprotein [Yersinia pestis biovar Orientalis str. IP275]
gi|165922118|gb|EDR39295.1| putative lipoprotein [Yersinia pestis biovar Orientalis str.
F1991016]
gi|165992561|gb|EDR44862.1| putative lipoprotein [Yersinia pestis biovar Antiqua str. E1979001]
gi|166206338|gb|EDR50818.1| putative lipoprotein [Yersinia pestis biovar Antiqua str.
B42003004]
gi|166960944|gb|EDR56965.1| putative lipoprotein [Yersinia pestis biovar Orientalis str.
MG05-1020]
gi|167052163|gb|EDR63571.1| putative lipoprotein [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|167057823|gb|EDR67569.1| putative lipoprotein [Yersinia pestis biovar Mediaevalis str.
K1973002]
gi|229681611|gb|EEO77705.1| protein assembly complex, lipoprotein component [Yersinia pestis
Nepal516]
gi|229687967|gb|EEO80039.1| protein assembly complex, lipoprotein component [Yersinia pestis
biovar Orientalis str. India 195]
gi|229694821|gb|EEO84868.1| protein assembly complex, lipoprotein component [Yersinia pestis
biovar Orientalis str. PEXU2]
gi|229701919|gb|EEO89942.1| protein assembly complex, lipoprotein component [Yersinia pestis
Pestoides A]
gi|262362443|gb|ACY59164.1| putative lipoprotein [Yersinia pestis D106004]
gi|262366550|gb|ACY63107.1| putative lipoprotein [Yersinia pestis D182038]
gi|270338381|gb|EFA49158.1| outer membrane assembly lipoprotein YfgL [Yersinia pestis KIM D27]
gi|294355021|gb|ADE65362.1| putative lipoprotein [Yersinia pestis Z176003]
gi|320016012|gb|ADV99583.1| protein assembly complex, lipoprotein component [Yersinia pestis
biovar Medievalis str. Harbin 35]
gi|342854420|gb|AEL72973.1| outer membrane biogenesis protein BamB [Yersinia pestis A1122]
gi|391424139|gb|EIQ86556.1| outer membrane assembly lipoprotein YfgL [Yersinia pestis PY-01]
gi|391425013|gb|EIQ87332.1| outer membrane assembly lipoprotein YfgL [Yersinia pestis PY-02]
gi|391425534|gb|EIQ87789.1| outer membrane assembly lipoprotein YfgL [Yersinia pestis PY-03]
gi|391439175|gb|EIQ99855.1| outer membrane assembly lipoprotein YfgL [Yersinia pestis PY-04]
gi|391440421|gb|EIR00995.1| outer membrane assembly lipoprotein YfgL [Yersinia pestis PY-05]
gi|391444013|gb|EIR04278.1| outer membrane assembly lipoprotein YfgL [Yersinia pestis PY-06]
gi|391455982|gb|EIR15048.1| outer membrane assembly lipoprotein YfgL [Yersinia pestis PY-07]
gi|391456941|gb|EIR15921.1| outer membrane assembly lipoprotein YfgL [Yersinia pestis PY-08]
gi|391459102|gb|EIR17908.1| outer membrane assembly lipoprotein YfgL [Yersinia pestis PY-09]
gi|391472078|gb|EIR29575.1| outer membrane assembly lipoprotein YfgL [Yersinia pestis PY-10]
gi|391473754|gb|EIR31101.1| outer membrane assembly lipoprotein YfgL [Yersinia pestis PY-11]
gi|391474227|gb|EIR31532.1| outer membrane assembly lipoprotein YfgL [Yersinia pestis PY-12]
gi|391488235|gb|EIR44101.1| outer membrane assembly lipoprotein YfgL [Yersinia pestis PY-13]
gi|391489586|gb|EIR45319.1| outer membrane assembly lipoprotein YfgL [Yersinia pestis PY-15]
gi|391490914|gb|EIR46521.1| outer membrane assembly lipoprotein YfgL [Yersinia pestis PY-14]
gi|391504025|gb|EIR58158.1| outer membrane assembly lipoprotein YfgL [Yersinia pestis PY-16]
gi|391504336|gb|EIR58436.1| outer membrane assembly lipoprotein YfgL [Yersinia pestis PY-19]
gi|391509286|gb|EIR62926.1| outer membrane assembly lipoprotein YfgL [Yersinia pestis PY-25]
gi|391519890|gb|EIR72490.1| outer membrane assembly lipoprotein YfgL [Yersinia pestis PY-29]
gi|391521898|gb|EIR74329.1| outer membrane assembly lipoprotein YfgL [Yersinia pestis PY-34]
gi|391522872|gb|EIR75230.1| outer membrane assembly lipoprotein YfgL [Yersinia pestis PY-32]
gi|391534881|gb|EIR86014.1| outer membrane assembly lipoprotein YfgL [Yersinia pestis PY-36]
gi|391537634|gb|EIR88511.1| outer membrane assembly lipoprotein YfgL [Yersinia pestis PY-42]
gi|391539870|gb|EIR90557.1| outer membrane assembly lipoprotein YfgL [Yersinia pestis PY-45]
gi|391552882|gb|EIS02267.1| outer membrane assembly lipoprotein YfgL [Yersinia pestis PY-46]
gi|391553334|gb|EIS02666.1| outer membrane assembly lipoprotein YfgL [Yersinia pestis PY-47]
gi|391554144|gb|EIS03415.1| outer membrane assembly lipoprotein YfgL [Yersinia pestis PY-48]
gi|391568022|gb|EIS15808.1| outer membrane assembly lipoprotein YfgL [Yersinia pestis PY-52]
gi|391569155|gb|EIS16782.1| outer membrane assembly lipoprotein YfgL [Yersinia pestis PY-53]
gi|391574494|gb|EIS21371.1| outer membrane assembly lipoprotein YfgL [Yersinia pestis PY-54]
gi|391582024|gb|EIS27836.1| outer membrane assembly lipoprotein YfgL [Yersinia pestis PY-55]
gi|391584656|gb|EIS30156.1| outer membrane assembly lipoprotein YfgL [Yersinia pestis PY-56]
gi|391595166|gb|EIS39240.1| outer membrane assembly lipoprotein YfgL [Yersinia pestis PY-58]
gi|391597919|gb|EIS41695.1| outer membrane assembly lipoprotein YfgL [Yersinia pestis PY-60]
gi|391599291|gb|EIS42924.1| outer membrane assembly lipoprotein YfgL [Yersinia pestis PY-59]
gi|391612266|gb|EIS54356.1| outer membrane assembly lipoprotein YfgL [Yersinia pestis PY-61]
gi|391612912|gb|EIS54933.1| outer membrane assembly lipoprotein YfgL [Yersinia pestis PY-63]
gi|391616592|gb|EIS58234.1| outer membrane assembly lipoprotein YfgL [Yersinia pestis PY-64]
gi|391625258|gb|EIS65785.1| outer membrane assembly lipoprotein YfgL [Yersinia pestis PY-65]
gi|391631120|gb|EIS70787.1| outer membrane assembly lipoprotein YfgL [Yersinia pestis PY-66]
gi|391636038|gb|EIS75118.1| outer membrane assembly lipoprotein YfgL [Yersinia pestis PY-71]
gi|391638255|gb|EIS77080.1| outer membrane assembly lipoprotein YfgL [Yersinia pestis PY-72]
gi|391648027|gb|EIS85592.1| outer membrane assembly lipoprotein YfgL [Yersinia pestis PY-76]
gi|391651844|gb|EIS88971.1| outer membrane assembly lipoprotein YfgL [Yersinia pestis PY-88]
gi|391656649|gb|EIS93252.1| outer membrane assembly lipoprotein YfgL [Yersinia pestis PY-89]
gi|391661083|gb|EIS97164.1| outer membrane assembly lipoprotein YfgL [Yersinia pestis PY-90]
gi|391668934|gb|EIT04122.1| outer membrane assembly lipoprotein YfgL [Yersinia pestis PY-91]
gi|391678144|gb|EIT12388.1| outer membrane assembly lipoprotein YfgL [Yersinia pestis PY-93]
gi|391679114|gb|EIT13275.1| outer membrane assembly lipoprotein YfgL [Yersinia pestis PY-92]
gi|391679930|gb|EIT14021.1| outer membrane assembly lipoprotein YfgL [Yersinia pestis PY-94]
gi|391692091|gb|EIT24961.1| outer membrane assembly lipoprotein YfgL [Yersinia pestis PY-95]
gi|391694969|gb|EIT27583.1| outer membrane assembly lipoprotein YfgL [Yersinia pestis PY-96]
gi|391696744|gb|EIT29197.1| outer membrane assembly lipoprotein YfgL [Yersinia pestis PY-98]
gi|391708395|gb|EIT39656.1| outer membrane assembly lipoprotein YfgL [Yersinia pestis PY-99]
gi|391712574|gb|EIT43439.1| outer membrane assembly lipoprotein YfgL [Yersinia pestis PY-100]
gi|391713113|gb|EIT43921.1| outer membrane assembly lipoprotein YfgL [Yersinia pestis PY-101]
gi|391724825|gb|EIT54361.1| outer membrane assembly lipoprotein YfgL [Yersinia pestis PY-102]
gi|391726215|gb|EIT55595.1| outer membrane assembly lipoprotein YfgL [Yersinia pestis PY-103]
gi|391728617|gb|EIT57705.1| outer membrane assembly lipoprotein YfgL [Yersinia pestis PY-113]
gi|411175694|gb|EKS45720.1| outer membrane biogenesis protein BamB [Yersinia pestis INS]
Length = 393
Score = 46.2 bits (108), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 64/155 (41%), Gaps = 30/155 (19%)
Query: 29 RLRWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLS----KLTGLSG 84
++ W + + P V++GVV + NG L A+N +GA+ W NL L G S
Sbjct: 141 QVAWQTVVAGEALSRPVVSDGVVLIHTSNGMLQALNESDGAIKWTLNLDTPALSLRGESA 200
Query: 85 TGIVVNVTVA-----VVVAVSRSNGELVWSTQI-------DPRPRSQITMSGSVYMGAFY 132
+ + V AV G+L+W +I + + I ++ V G Y
Sbjct: 201 PAVAFGAAIVGGDNGRVSAVMMEQGQLIWQQRISQVTGATEIDRLNDIDITPVVVDGVVY 260
Query: 133 VGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQ 167
+ G+L LD+R+G+I+W+
Sbjct: 261 --------------ALAYNGNLTALDLRSGQILWK 281
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 54/244 (22%), Positives = 90/244 (36%), Gaps = 59/244 (24%)
Query: 44 PAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTGL---------------SGTGIV 88
PA V+ G + A++A G IW+ +LS+ T SG+ +
Sbjct: 65 PAWQGTSVFAADRKGLVKAMDADTGKQIWQTDLSEKTNFLSSNHSAMLSGGVTASGSHVY 124
Query: 89 VNVTVAVVVAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCC 148
V AVV A++ +G++ W T + S+ +S V +
Sbjct: 125 VGSEKAVVYALNAYDGQVAWQTVVAGEALSRPVVSDGVVL------------------IH 166
Query: 149 TFRGSLAKLDVRNGRIIWQTYMLPDNGGKRG------GYSGAAVWGSSPAIDVIRR---- 198
T G L L+ +G I W + RG + A V G + + +
Sbjct: 167 TSNGMLQALNESDGAIKWTLNLDTPALSLRGESAPAVAFGAAIVGGDNGRVSAVMMEQGQ 226
Query: 199 ---QKQNNQTTKPTHPDQCISSDI-------------YANSIVALDIDSGRIAWAKPLGG 242
Q++ +Q T T D+ DI Y ++ ALD+ SG+I W + +G
Sbjct: 227 LIWQQRISQVTGATEIDRLNDIDITPVVVDGVVYALAYNGNLTALDLRSGQILWKREIGS 286
Query: 243 YDIF 246
+ F
Sbjct: 287 VNDF 290
>gi|423248378|ref|ZP_17229394.1| hypothetical protein HMPREF1066_00404 [Bacteroides fragilis
CL03T00C08]
gi|423253326|ref|ZP_17234257.1| hypothetical protein HMPREF1067_00901 [Bacteroides fragilis
CL03T12C07]
gi|392657226|gb|EIY50863.1| hypothetical protein HMPREF1067_00901 [Bacteroides fragilis
CL03T12C07]
gi|392659591|gb|EIY53209.1| hypothetical protein HMPREF1066_00404 [Bacteroides fragilis
CL03T00C08]
Length = 621
Score = 46.2 bits (108), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 63/297 (21%), Positives = 116/297 (39%), Gaps = 47/297 (15%)
Query: 24 TVRNLRLRWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSK----- 78
T++ R WSF +GK I TPA +G+V F S + +Y ++A G W +++
Sbjct: 324 TLKEGRKLWSFQSGKRIVGTPAATDGIVVFGSADHNIYGLDAVTGKERWRVTVAQPVLGA 383
Query: 79 LTGLSGTGIVVNVTVAVVVAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSL 138
+T G + + + A+ NG++VW+ Y G+
Sbjct: 384 VTIEKGIA-YIGGSDSTFRAIRIKNGKVVWT----------------------YTGIKGY 420
Query: 139 EEALP---ADQCC--TFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYSGAAVWGSSPAI 193
E P D+ + +L L+ NG+ +W+ G R +S AAVW +
Sbjct: 421 IETKPLVEGDKVIFGAWDNTLYALNKSNGKELWKW----TGGLTRMHFSPAAVWPVAAHG 476
Query: 194 DVIRRQKQNNQTTKPTHPDQCI--SSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCL 251
V Q T + + + + L + +I ++K + + Y T
Sbjct: 477 KVFITDPQRAMTAISLKTGKTVWRTFQSMVRETIGLSANKNQI-YSKTMNDSVVCYST-- 533
Query: 252 VPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDIIW 308
+ + P N+ + AP + + +G +V + K G +A D +G ++W
Sbjct: 534 ISDTPKEIWASNVGFGYEHAPS-MQMEKDG----IVFSSTKEGLIFALDASTGQVLW 585
>gi|383317547|ref|YP_005378389.1| PQQ-dependent dehydrogenase [Frateuria aurantia DSM 6220]
gi|379044651|gb|AFC86707.1| PQQ-dependent dehydrogenase, methanol/ethanol family [Frateuria
aurantia DSM 6220]
Length = 737
Score = 46.2 bits (108), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 74/354 (20%), Positives = 125/354 (35%), Gaps = 70/354 (19%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRW--SFYAGKDISATPAVANGVVYFPSWNG 58
WL +G + +RY+ + IN + L L W + + TP V NGV+Y +
Sbjct: 57 WLTYGRTYSEQRYSPLD-QINRGNIGQLHLAWYQDLDSNRGQEGTPLVVNGVIYATTNWS 115
Query: 59 YLYAVNAFNGALIWEQNLSKLTGL---SGTGIVVNVTVAV-------------VVAVSRS 102
+ A + G L+W + K+ G G VN A ++A+
Sbjct: 116 KVRAYDGATGKLLWSYD-PKVPGYVADKGCCDTVNRGAAYWNGKIYFGTFDGRLIALDAK 174
Query: 103 NGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTF--RGSLAKLDVR 160
G+LVWS P+ S GA + + + + F RG ++ D
Sbjct: 175 TGKLVWSVYTIPKTGSLGQQRSYTVDGAPRIAKGRV---IIGNGGAEFGARGFVSAFDAE 231
Query: 161 NGRIIWQTYMLPD------------------------NGGKRGGYSGAAVWGS---SPAI 193
G++ W+ Y +P+ NG + G VW S P
Sbjct: 232 TGKLDWRFYTVPNPENKPDGAASDSVLMSKAYQTWSANGAWKRQGGGGTVWDSIVYDPQT 291
Query: 194 DVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVP 253
D+I N + + + SIVA+ ++G W D + +T +
Sbjct: 292 DLIYLGVGNGSPWNYKLRSEGKGDNWFLGSIVAIKPETGEYVWHFQETPMDQWDYTSV-- 349
Query: 254 NNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
+ M I NG+ R V++ K+GF + D +G+ +
Sbjct: 350 ----------------QQIMTADIMVNGQKRHVIMHAPKNGFFYILDAKTGEFL 387
>gi|265765104|ref|ZP_06093379.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
gi|423259241|ref|ZP_17240164.1| hypothetical protein HMPREF1055_02441 [Bacteroides fragilis
CL07T00C01]
gi|423263788|ref|ZP_17242791.1| hypothetical protein HMPREF1056_00478 [Bacteroides fragilis
CL07T12C05]
gi|263254488|gb|EEZ25922.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
gi|387776821|gb|EIK38921.1| hypothetical protein HMPREF1055_02441 [Bacteroides fragilis
CL07T00C01]
gi|392706054|gb|EIY99177.1| hypothetical protein HMPREF1056_00478 [Bacteroides fragilis
CL07T12C05]
Length = 621
Score = 46.2 bits (108), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 63/297 (21%), Positives = 116/297 (39%), Gaps = 47/297 (15%)
Query: 24 TVRNLRLRWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSK----- 78
T++ R WSF +GK I TPA +G+V F S + +Y ++A G W +++
Sbjct: 324 TLKEGRKLWSFQSGKRIVGTPAATDGIVVFGSADHNIYGLDAVTGKERWRVTVAQPVLGA 383
Query: 79 LTGLSGTGIVVNVTVAVVVAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSL 138
+T G + + + A+ NG++VW+ Y G+
Sbjct: 384 VTIEKGIA-YIGGSDSTFRAIRIKNGKVVWT----------------------YTGIKGY 420
Query: 139 EEALP---ADQCC--TFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYSGAAVWGSSPAI 193
E P D+ + +L L+ NG+ +W+ G R +S AAVW +
Sbjct: 421 IETKPLVEGDKVIFGAWDNTLYALNKSNGKELWKW----TGGLTRMHFSPAAVWPVAAHG 476
Query: 194 DVIRRQKQNNQTTKPTHPDQCI--SSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCL 251
V Q T + + + + L + +I ++K + + Y T
Sbjct: 477 KVFITDPQRAMTAISLKTGKTVWRTFQSMVRETIGLSANKNQI-YSKTMNDSVVCYST-- 533
Query: 252 VPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDIIW 308
+ + P N+ + AP + + +G +V + K G +A D +G ++W
Sbjct: 534 ISDTPKEIWASNVGFGYEHAPS-MQMEKDG----IVFSSTKEGLIFALDASTGQVLW 585
>gi|255035169|ref|YP_003085790.1| quinoprotein glucose dehydrogenase [Dyadobacter fermentans DSM
18053]
gi|254947925|gb|ACT92625.1| Quinoprotein glucose dehydrogenase [Dyadobacter fermentans DSM
18053]
Length = 769
Score = 46.2 bits (108), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 83/401 (20%), Positives = 136/401 (33%), Gaps = 134/401 (33%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAGK---------------------- 38
W+ +GG+ RY+ IN V LR+ W + A K
Sbjct: 43 WIAYGGNKAGNRYS-PLTQINLSNVSQLRVAWEYDAAKLAEVTPAAGAPAAGSPAAGAPA 101
Query: 39 ----------DISATPAVANGVVY---------------------FPSWNGYLYAVNAFN 67
+I P + NGV+Y F + G +A
Sbjct: 102 SGSPARRRPMEIQCQPIIVNGVLYGTTPYLSLFALKADTGEELWRFDPFAGGTPRFHANR 161
Query: 68 GALIWEQNLSKLTGLSGTGIVVNVTVAVVVAVSR--SNGELVWSTQIDPRP-RSQITMS- 123
G + WE K + + V A V R G + S + RP R +S
Sbjct: 162 GVMFWEDGRDKRILYTAGNHLCAVDAATGKLVQRFGDGGRVDLSAGVTGRPGRDNDKLSV 221
Query: 124 -----GSVYMGAFYVG--LSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNGG 176
G +Y +G +S +A P G + DVR G++ W + +P+ G
Sbjct: 222 DATSPGVIYKDMLVIGSRVSEYGDAAP--------GHIRAFDVRTGKLKWTFHTVPEPGE 273
Query: 177 -----------KRGG------------YSGAAVWGS-SPAIDVIRRQKQNNQTTKPTHPD 212
KR G GA +G+ SP++D ++
Sbjct: 274 PGHDTWPKDAWKRIGGANNWAGMVLDEKRGAVYFGTGSPSVDFYGADRE----------- 322
Query: 213 QCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAP 272
++YAN +++L+ + G++ W +D++ D D P
Sbjct: 323 ---GKNLYANCVISLNAEKGKMNWYYQTVHHDLW------------------DRDISCQP 361
Query: 273 MLLTIS---TNGRFR--DVVVAVQKSGFAWAFDRDSGDIIW 308
LLT++ +NG+ R D V K G + DRD+G ++
Sbjct: 362 NLLTVTHKGSNGKPRKIDAVAQATKDGLLFLLDRDTGKPLF 402
>gi|189464398|ref|ZP_03013183.1| hypothetical protein BACINT_00739 [Bacteroides intestinalis DSM
17393]
gi|189438188|gb|EDV07173.1| PQQ enzyme repeat protein [Bacteroides intestinalis DSM 17393]
Length = 619
Score = 46.2 bits (108), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 67/291 (23%), Positives = 116/291 (39%), Gaps = 37/291 (12%)
Query: 25 VRNLRLRWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTGLSG 84
++N + W+F +GK I TPA A+GVV F S + +Y +N+ +G L+W
Sbjct: 323 LKNGKKLWNFQSGKRIVGTPAAADGVVVFGSADRNIYGLNSKDGKLLW------------ 370
Query: 85 TGIVVNVTVAVVVAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALP- 143
V V+ AV+ NG + + D R+ +G V Y G+ E P
Sbjct: 371 ---TVKAKSPVLGAVTIENG-IAYIGASDSTFRAIDIHTGKVIW--VYTGVKGYIETKPL 424
Query: 144 --ADQCC--TFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYSGAAVWGSSPAIDVIRRQ 199
AD+ + +L L+ +G+ +W+ G R +S AAVW + V
Sbjct: 425 VTADKVIFGAWDNTLYALNKADGKELWKW----TGGLTRMHFSPAAVWPVAAEGKVFITD 480
Query: 200 KQNNQTTKPTHPDQCI--SSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPD 257
Q T + + + + L D R+ ++K + + Y T + P
Sbjct: 481 PQRAMTAINIENGETVWRTFQSMVRETIGLSEDGTRV-FSKTMNDSIVCYATQ--GDQPR 537
Query: 258 CPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDIIW 308
N+ + AP + + G V+ K G +A + +G ++W
Sbjct: 538 ELWASNVGFGYEHAPS-MQVEKGG----VMFGSTKEGLIFALEAQTGKVLW 583
>gi|395235037|ref|ZP_10413257.1| outer membrane biogenesis protein BamB [Enterobacter sp. Ag1]
gi|394730322|gb|EJF30180.1| outer membrane biogenesis protein BamB [Enterobacter sp. Ag1]
Length = 393
Score = 46.2 bits (108), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 64/155 (41%), Gaps = 26/155 (16%)
Query: 30 LRWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLS----KLTGLSGT 85
+ W + + P V++GVV + NG L A+N +GA+ W NL L G S
Sbjct: 142 IAWQAKVAGEALSRPVVSDGVVLIHTSNGMLQALNEADGAVKWSVNLDMPALSLRGESAP 201
Query: 86 GIVVNVTVA-----VVVAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEE 140
+ V AV G+L+W +I SQ T GA + S +
Sbjct: 202 ATAFGAAIVGGDNGRVSAVLMQQGQLIWQQRI-----SQAT-------GATEIDRLSDVD 249
Query: 141 ALPAD-----QCCTFRGSLAKLDVRNGRIIWQTYM 170
P + G+L LD+R+G+I+W+ M
Sbjct: 250 TTPVIVNGVVYALAYNGNLTALDLRSGQIMWKREM 284
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 90/235 (38%), Gaps = 41/235 (17%)
Query: 44 PAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG---------------LSGTGIV 88
PA +Y G + A+NA +G W+ +LS+ TG + G +
Sbjct: 65 PAWQGSTIYAADRRGIVKALNADDGKEEWKVDLSEKTGFFSSNIPALLSGGLTVDGGHVY 124
Query: 89 VNVTVAVVVAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVG-LSSLEEALPADQ- 146
V A V A++ S+G + W ++ S+ +S V + G L +L EA A +
Sbjct: 125 VGTEKAKVFALNTSDGSIAWQAKVAGEALSRPVVSDGVVLIHTSNGMLQALNEADGAVKW 184
Query: 147 -------CCTFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYS------GAAVWGS--SP 191
+ RG A I+ GG G S G +W S
Sbjct: 185 SVNLDMPALSLRGESAPATAFGAAIV---------GGDNGRVSAVLMQQGQLIWQQRISQ 235
Query: 192 AIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIF 246
A + ++ T P + + + Y ++ ALD+ SG+I W + +G + F
Sbjct: 236 ATGATEIDRLSDVDTTPVIVNGVVYALAYNGNLTALDLRSGQIMWKREMGSVNDF 290
>gi|418055161|ref|ZP_12693216.1| PQQ-dependent dehydrogenase, methanol/ethanol family
[Hyphomicrobium denitrificans 1NES1]
gi|353210743|gb|EHB76144.1| PQQ-dependent dehydrogenase, methanol/ethanol family
[Hyphomicrobium denitrificans 1NES1]
Length = 607
Score = 46.2 bits (108), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 77/359 (21%), Positives = 132/359 (36%), Gaps = 84/359 (23%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAG--KDISATPAVANGVVY----FP 54
W GD +N RY+ + IN V +LR W+F G + +P V ++Y FP
Sbjct: 36 WAMQQGDYSNHRYSKLD-QINTKNVGSLRTEWTFSTGVLRGHEGSPLVIGNLMYVHTPFP 94
Query: 55 SWNGYLYAVNAFNGA-LIWE----QNLSKLTGLSGTGIVVNVTVA-----------VVVA 98
+ +YA++ N ++W+ Q+ S + + + V A +VA
Sbjct: 95 N---IVYALDLDNNEKIVWKYTPKQDPSVIPVMCCDTVNRGVQYADGTIFLYQADTTLVA 151
Query: 99 VSRSNGELVWST-QIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKL 157
+ G+ W DP+ T + + VG+S E + RG L
Sbjct: 152 LDAKTGKEKWKVVNGDPKKGETGTSAPLIVKDKVIVGISGAEYGI--------RGRLTAY 203
Query: 158 DVRNGRIIW----------------QTYMLPDNGGKRGGYS----------GAAVWG--- 188
++ +G++ W T L GK S G + WG
Sbjct: 204 NISDGKLAWRAWSTGSDKDILVDPEHTMFLGKPVGKDSSLSTWNGDQWKIGGGSTWGWYS 263
Query: 189 SSPAIDVIRRQKQNNQTTKPTH---PDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDI 245
P +++I N T P PD + +I A + D+G AWA + +D
Sbjct: 264 YDPKLNLIYYGTANPGTWNPVQRAGPDGKPIDQKWTMTIFARNPDTGVAAWAYQMTPFDE 323
Query: 246 FYFTCLVPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSG 304
+ + + E + ++ NG +V+V ++GFA+ DR +G
Sbjct: 324 WDYDGI-----------------NEMILADDMTINGEKHNVLVHFDRNGFAYTLDRKTG 365
>gi|218533308|ref|YP_002424123.1| PQQ-dependent dehydrogenase, methanol/ethanol family
[Methylobacterium extorquens CM4]
gi|218525611|gb|ACK86195.1| PQQ-dependent dehydrogenase, methanol/ethanol family
[Methylobacterium extorquens CM4]
Length = 599
Score = 46.2 bits (108), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 71/353 (20%), Positives = 135/353 (38%), Gaps = 85/353 (24%)
Query: 7 DLNNRRYAYGEVLINPVTVRNLRLRWSFYAG--KDISATPAVANGVVY----FPSWNGYL 60
D N RY+ + IN V+NL++ W+F G + +P V ++Y FP+ +
Sbjct: 40 DYANTRYSKLD-QINASNVKNLQVAWTFSTGVLRGHEGSPLVVGDIMYVHTPFPN---IV 95
Query: 61 YAVNAFNGA-LIWE---------------QNLSKLTGLSGTGIVVNVTVAVVVAVSRSNG 104
YA++ N A ++W+ +++ + I ++ +V++ +G
Sbjct: 96 YALDLNNEAKILWKYEPKQDPSVIPVMCCDTVNRGLAYADGAIFLHQADTTLVSLDAKSG 155
Query: 105 ELVWSTQI-DPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGR 163
++ WS + DP T + VG+S E + RG + ++++G+
Sbjct: 156 KVNWSVKNGDPAVGETNTATVMPVKDKLIVGISGAEFGI--------RGHITAYNLKDGK 207
Query: 164 IIWQTYML-PDN-------------------------GGKRGGYSGAAVWG---SSPAID 194
W+ Y + PDN G + G A WG P ++
Sbjct: 208 RAWRAYTVGPDNEMLVDPEKTTHLGKPIGKDSSLKTWDGDQWKTGGGATWGWYSYDPKLN 267
Query: 195 VIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPN 254
++ N T +P Q + + SI A D D+G W ++ T
Sbjct: 268 LVYYGTANPSTW---NPKQRPGDNKWTMSIFARDPDTGMAKW--------VYQMT----- 311
Query: 255 NPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
P D D +L +G+ R ++ ++GF + DR +G+++
Sbjct: 312 -----PHDEWDYDGINEMILTDQKVDGKDRPLLTHFDRNGFGYTLDRATGEVL 359
>gi|432765870|ref|ZP_20000308.1| lipoprotein yfgL [Escherichia coli KTE48]
gi|431310045|gb|ELF98238.1| lipoprotein yfgL [Escherichia coli KTE48]
Length = 392
Score = 46.2 bits (108), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 94/226 (41%), Gaps = 24/226 (10%)
Query: 44 PAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG--------------LSGTGIVV 89
PA+A+ VVY G + A+NA +G IW +L++ G ++G + +
Sbjct: 65 PALADNVVYAADRAGLVKAMNADDGKEIWSVSLAEKDGWLSKEPALLSGGVTVAGGHVYI 124
Query: 90 NVTVAVVVAVSRSNGELVWSTQIDPRPRSQ-ITMSGSVYMGAFYVGLSSLEEALPADQCC 148
A V A++ S+G + W T++ S+ + G V + L +L EA A +
Sbjct: 125 GSEKAQVYALNTSDGTVAWQTKVAGEALSRPVVSDGLVLIHTSNGQLQALNEADGAVK-W 183
Query: 149 TFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYS------GAAVWGS--SPAIDVIRRQK 200
T + L +R + GG G S G +W S A +
Sbjct: 184 TVNLDMPSLSLRGESAPATAFGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDR 243
Query: 201 QNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIF 246
++ T P + + + Y ++ ALD+ SG+I W + LG + F
Sbjct: 244 LSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQIMWKRELGSVNDF 289
Score = 42.0 bits (97), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 63/157 (40%), Gaps = 34/157 (21%)
Query: 32 WSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLS----KLTGLSGTGI 87
W + + P V++G+V + NG L A+N +GA+ W NL L G S
Sbjct: 143 WQTKVAGEALSRPVVSDGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPAT 202
Query: 88 VVNVTVA-----VVVAVSRSNGELVW---------STQIDPRPRSQITMSGSVYMGAFYV 133
V V AV G+++W ST+ID S + + V G +
Sbjct: 203 AFGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEID--RLSDVDTTPVVVNGVVF- 259
Query: 134 GLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYM 170
+ G+L LD+R+G+I+W+ +
Sbjct: 260 -------------ALAYNGNLTALDLRSGQIMWKREL 283
Score = 38.9 bits (89), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 61/131 (46%), Gaps = 19/131 (14%)
Query: 39 DISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG--LSGTGIVVNVTVAVV 96
D+ TP V NGVV+ ++NG L A++ +G ++W++ L + + G I + V
Sbjct: 246 DVDTTPVVVNGVVFALAYNGNLTALDLRSGQIMWKRELGSVNDFIVDGNRIYLVDQNDRV 305
Query: 97 VAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAK 156
+A++ G +W TQ D R + S +Y G VG S G L
Sbjct: 306 MALTIDGGVTLW-TQSDLLHR--LLTSPVLYNGNLVVGDS--------------EGYLHW 348
Query: 157 LDVRNGRIIWQ 167
++V +GR + Q
Sbjct: 349 INVEDGRFVAQ 359
>gi|393719014|ref|ZP_10338941.1| pyrrolo-quinoline quinone repeat-containing protein [Sphingomonas
echinoides ATCC 14820]
Length = 455
Score = 46.2 bits (108), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 59/123 (47%), Gaps = 3/123 (2%)
Query: 6 GDLNNRRYAYGEVLINPVTVRNLRLRWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNA 65
G+LN RY G L R+ + S + DI A P + GVV+ G + A+
Sbjct: 260 GELNAYRYENGRTLWQDALSRST-ISTSVSSLADIDADPVIDRGVVFAVGQGGRMVALEI 318
Query: 66 FNGALIWEQNLSKLTG--LSGTGIVVNVTVAVVVAVSRSNGELVWSTQIDPRPRSQITMS 123
+G +WEQN + ++ ++G + + A +V ++R+ G++ W +Q+ +
Sbjct: 319 VSGQRMWEQNFAGISTPWVAGEWVFLVTDDARLVCLARATGKVRWISQLQHFKSEKRKKD 378
Query: 124 GSV 126
G++
Sbjct: 379 GTI 381
Score = 41.6 bits (96), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 65/152 (42%), Gaps = 24/152 (15%)
Query: 29 RLRWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLT-------- 80
++ W G + P VANG VY S + LYA++ +GA++W Q+ S T
Sbjct: 186 KVLWRVKPGAPLRGAPTVANGQVYILSQDNQLYALSQADGAVVWTQSGSIETQGVFGVAA 245
Query: 81 -GLSGTGIVVNVTVAVVVAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLE 139
+S +V + + A NG +W D RS I+ S S L+ ++
Sbjct: 246 PAVSQGTVVAGFSSGELNAYRYENGRTLWQ---DALSRSTISTSVS--------SLADID 294
Query: 140 EALPADQCCTFR----GSLAKLDVRNGRIIWQ 167
D+ F G + L++ +G+ +W+
Sbjct: 295 ADPVIDRGVVFAVGQGGRMVALEIVSGQRMWE 326
>gi|445494701|ref|ZP_21461745.1| putative serine/threonine protein kinase [Janthinobacterium sp.
HH01]
gi|444790862|gb|ELX12409.1| putative serine/threonine protein kinase [Janthinobacterium sp.
HH01]
Length = 419
Score = 46.2 bits (108), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 31/44 (70%)
Query: 29 RLRWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIW 72
+L W +AG I++TPAVA+G+VYF + +G LYAV+A G W
Sbjct: 70 KLAWLHHAGAGIASTPAVADGIVYFLARDGKLYAVDAQTGVRRW 113
>gi|409396124|ref|ZP_11247145.1| quinoprotein alcohol dehydrogenase [Pseudomonas sp. Chol1]
gi|409119377|gb|EKM95761.1| quinoprotein alcohol dehydrogenase [Pseudomonas sp. Chol1]
Length = 590
Score = 46.2 bits (108), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 66/291 (22%), Positives = 113/291 (38%), Gaps = 60/291 (20%)
Query: 2 LNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAG----KDISATPAVANGVVYFPSWN 57
+ +G L +RY+ L N V+ LR W+F G + A P + +GV+Y
Sbjct: 45 VTNGMGLQGQRYSPLSTL-NTENVQQLRPVWAFSLGGEKQRGQEAQPLIKDGVMYITGSY 103
Query: 58 GYLYAVNAFNGALIWEQNLSKLTGLSGTGIVVNVTVAV-------------VVAVSRSNG 104
+YAV+A G +W+ + G+ V+N VA+ +VA+++ G
Sbjct: 104 SRVYAVDARTGKELWQYDARLPDGIMPCCDVINRGVALYDDLVIFGTLDAKLVALNKDTG 163
Query: 105 ELVWSTQI-DPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGR 163
++VW + D + +T + + G G+S E + G + + +NG
Sbjct: 164 KVVWKKTVADYKAGYSLTAAPLIVKGKLITGVSGGEFGV--------VGKVEAYNPKNGD 215
Query: 164 IIWQT--------YMLPDNGGKRGGYS----------------GAAVWGS---SPAIDVI 196
++W Y+ D G S GAA W P D +
Sbjct: 216 LLWTRPTVEGHMGYVWKDGKKVESGISGGEAGKTWPGDLWKTGGAATWLGGYYDPDTDSL 275
Query: 197 RRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAW---AKPLGGYD 244
N P + ++Y++S +A+D D G I W + P G+D
Sbjct: 276 LFGTGN---PSPWNSHLRPGDNLYSSSRLAIDPDDGSIKWHFQSTPHDGWD 323
>gi|407803173|ref|ZP_11150010.1| cell surface protein [Alcanivorax sp. W11-5]
gi|407022806|gb|EKE34556.1| cell surface protein [Alcanivorax sp. W11-5]
Length = 570
Score = 46.2 bits (108), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 69/143 (48%), Gaps = 18/143 (12%)
Query: 6 GDLNNRRYAYGEVLINPVTVRNLRLRWSFYAGKDISATPAV-ANGVVYFPSWNGYLYAVN 64
G N + YA +NP + RWSF + + ++PAV A+G VY S+NG +YA+N
Sbjct: 396 GSTNGKTYA-----LNP---EDGSERWSFNS-DSVHSSPAVGADGTVYVGSYNGKVYALN 446
Query: 65 AFNGALIWEQNLSKLTGLSGTGIVVNVTVAV------VVAVSRSNGELVWS--TQIDPRP 116
+G+ IW + G S I + TV + V A++ +G +WS T R
Sbjct: 447 PDDGSEIWSFTTAGSVGESSPAIGADGTVYIGSYDKKVYALNPDDGSEIWSFTTGYLLRS 506
Query: 117 RSQITMSGSVYMGAFYVGLSSLE 139
I G+VY+ + L +L+
Sbjct: 507 SPAIGADGTVYIASSDQQLYALD 529
Score = 38.9 bits (89), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 52/109 (47%), Gaps = 11/109 (10%)
Query: 32 WSFYAGKDISATPAV-ANGVVYFPSWNGYLYAVNAFNGALIWEQN-------LSKLTGLS 83
WSF AG + + AV A+G VY S +G +YA++ +G+ +W Q S G
Sbjct: 290 WSFLAGSAVRGSLAVGADGTVYAGSSDGTVYALDPDDGSELWSQPHGIGAAVFSLALGAG 349
Query: 84 GTGIVVNVTVAVVVAVSRSNGELVWSTQIDPRPRSQITM--SGSVYMGA 130
GT + V V A++ NG +WS RS G++Y+G+
Sbjct: 350 GT-LYVGSINGTVYALNPDNGSEIWSFATHSAVRSTPAQGADGTLYIGS 397
>gi|220922320|ref|YP_002497622.1| PQQ-dependent dehydrogenase [Methylobacterium nodulans ORS 2060]
gi|219946927|gb|ACL57319.1| PQQ-dependent dehydrogenase, methanol/ethanol family
[Methylobacterium nodulans ORS 2060]
Length = 611
Score = 46.2 bits (108), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 62/274 (22%), Positives = 107/274 (39%), Gaps = 47/274 (17%)
Query: 40 ISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTGLSGTGIVVNVTVAVVVAV 99
++ P A+G ++F + +G + +V+A G W+ + + L T + + V V
Sbjct: 148 VNRGPTYADGHLFFNTLDGNVVSVDAATGQEAWKTKVGNIN-LGETMTMAPLVAHGKVFV 206
Query: 100 SRSNGEL---VWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAK 156
S GEL W +D + SG V AF G P
Sbjct: 207 GNSGGELGVRGWIQALDQQ-------SGKVAWKAFSTG--------PDKDVLIGSDFKPY 251
Query: 157 LDVRNGRIIWQTYMLPDNGGKRGGYSGAAVWG---SSPAIDVIRRQKQNNQTTKPTHPDQ 213
D G+ + P N ++G G VWG P +++I N P + DQ
Sbjct: 252 YDTDKGQDL-GVKSWPPNAWEQG---GGTVWGWLSYDPDLNLIYYGTGN---PGPWNADQ 304
Query: 214 CISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPM 273
+ + + I A D D+G+ W +D++ D D +
Sbjct: 305 RPGDNKWTSGIFARDADTGQARWFYQWSPHDLY------------------DWDGINEQI 346
Query: 274 LLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
LL ++ GR R V+V +++G+ + DR SG+++
Sbjct: 347 LLDMTWKGRPRKVLVRPERNGYVYVLDRTSGEVL 380
>gi|392969718|ref|ZP_10335133.1| Quinoprotein glucose dehydrogenase [Fibrisoma limi BUZ 3]
gi|387841912|emb|CCH57191.1| Quinoprotein glucose dehydrogenase [Fibrisoma limi BUZ 3]
Length = 739
Score = 45.8 bits (107), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 82/383 (21%), Positives = 132/383 (34%), Gaps = 120/383 (31%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAGK-----------DISATPAVANG 49
W +GG+ RY+ IN V L+ W+F G+ DI P V +G
Sbjct: 32 WPTYGGNPAGTRYS-PLSQINLENVSRLQPAWTFDTGENKNLSADDRGMDIQCQPIVVDG 90
Query: 50 VVYFPSWNGYLYAVNAFNGALIW----------EQNLSKLTGLS---------------G 84
V+Y + L+A++A G IW + L G++
Sbjct: 91 VLYGTTPRHKLFAIDAATGKEIWRFDPYADPNKKPRFHPLRGVTYWADGDDRRILYSSGP 150
Query: 85 TGIVVNVTVAVVVAVSRSNG-----ELVWSTQIDPRPRSQI----TMSGSVYMGAFYVGL 135
T +N ++ ++G E + Q + + T G +Y VG
Sbjct: 151 TLYAINAKTGALIESFGTHGIVDLHEGLGDAQTLGHETASLSIRNTTPGVIYRDLIIVGS 210
Query: 136 SSLE--EALPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYS----------- 182
S E +A P G + +VR G++ W + +P G GY
Sbjct: 211 SVSEGGDAPP--------GHIRAFNVRTGKLAWVFHTIPLPG--EYGYETWMTDSYRKLG 260
Query: 183 GAAVWGS---------------SPAIDVI--RRQKQNNQTTKPTHPDQCISSDIYANSIV 225
GA W SP++D R QN ++AN ++
Sbjct: 261 GANCWAGMVVDEKRGIVYAGTGSPSVDFYGGARAGQN----------------LFANCVL 304
Query: 226 ALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRD 285
ALD +G+ W +D++ D D P L+T+ GR +
Sbjct: 305 ALDASTGKRIWHFQTVHHDLW------------------DRDLPCPPNLITVMYEGRRVE 346
Query: 286 VVVAVQKSGFAWAFDRDSGDIIW 308
V K G+ + FDRD+G ++
Sbjct: 347 AVAQATKDGYVFVFDRDTGKPLF 369
>gi|386811427|ref|ZP_10098653.1| conserved hypothetical protein [planctomycete KSU-1]
gi|386406151|dbj|GAB61534.1| conserved hypothetical protein [planctomycete KSU-1]
Length = 381
Score = 45.8 bits (107), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 36/54 (66%), Gaps = 2/54 (3%)
Query: 26 RNLRLRWSFYAGKDISATPAV-ANGVVYFPSWNGYLYAVNAFNGALIWEQNLSK 78
++ L+W F AG I+A+P + ANGV+Y SW+G +YA+N +G+L W + +
Sbjct: 301 KDGTLKWKFKAGNSITASPGIDANGVIYVGSWDGKVYAINN-DGSLKWSMTIGE 353
Score = 38.9 bits (89), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 27/45 (60%), Gaps = 2/45 (4%)
Query: 29 RLRWSFYAGKDISATPAV-ANGVVYFPSWNGYLYAVNAFNGALIW 72
RL+W F I ++P V G VYF S+ G LYA+ A NG L+W
Sbjct: 144 RLKWKFQTKGAIHSSPVVDEKGTVYFGSYEGKLYAI-ASNGKLLW 187
>gi|307132057|ref|YP_003884073.1| protein assembly complex, lipoprotein component [Dickeya dadantii
3937]
gi|306529586|gb|ADM99516.1| protein assembly complex, lipoprotein component [Dickeya dadantii
3937]
Length = 393
Score = 45.8 bits (107), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 94/215 (43%), Gaps = 44/215 (20%)
Query: 40 ISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG-------LSGTGIVVNVT 92
+S AV+ VY S L+A+NA +GAL W+ +K+ G +S ++++ +
Sbjct: 112 LSGGVAVSGNHVYVGSERAQLFALNADDGALQWQ---TKVAGEVLSSPVVSDGVVIIHTS 168
Query: 93 VAVVVAVSRSNGELVWSTQID-PRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFR 151
++ A+S S+G + W+ +D P + + + GA VG +
Sbjct: 169 NGMLQALSESDGTIKWTVNLDMPSLSLRGESAPTTAFGAAIVGGDN-------------- 214
Query: 152 GSLAKLDVRNGRIIWQTYMLPDNGGKRGGYSGAAVWGSSPAIDVIRRQKQNNQTTKPTHP 211
G ++ + + G++IWQ + + GG + A + N+ T P
Sbjct: 215 GRVSAVMINQGQLIWQQRI-----SQPGGATEIA--------------RLNDVDTTPVVA 255
Query: 212 DQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIF 246
+ + Y ++ ALD+ SG+I W + +G + F
Sbjct: 256 GNVVYALGYNGNLTALDLRSGQITWKREIGSVNDF 290
Score = 42.7 bits (99), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 62/148 (41%), Gaps = 18/148 (12%)
Query: 30 LRWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLS----KLTGLSGT 85
L+W ++ ++P V++GVV + NG L A++ +G + W NL L G S
Sbjct: 142 LQWQTKVAGEVLSSPVVSDGVVIIHTSNGMLQALSESDGTIKWTVNLDMPSLSLRGESAP 201
Query: 86 GIVVNVTVA-----VVVAVSRSNGELVWSTQI-DPRPRSQITMSGSVYMGAFYVGLSSLE 139
+ V AV + G+L+W +I P ++I V G
Sbjct: 202 TTAFGAAIVGGDNGRVSAVMINQGQLIWQQRISQPGGATEIARLNDVDTTPVVAG----- 256
Query: 140 EALPADQCCTFRGSLAKLDVRNGRIIWQ 167
+ G+L LD+R+G+I W+
Sbjct: 257 ---NVVYALGYNGNLTALDLRSGQITWK 281
>gi|366160147|ref|ZP_09460009.1| outer membrane biogenesis protein BamB [Escherichia sp. TW09308]
gi|432373139|ref|ZP_19616177.1| lipoprotein yfgL [Escherichia coli KTE11]
gi|430895145|gb|ELC17416.1| lipoprotein yfgL [Escherichia coli KTE11]
Length = 392
Score = 45.8 bits (107), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 95/226 (42%), Gaps = 24/226 (10%)
Query: 44 PAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG--------------LSGTGIVV 89
PA+A+ VVY G + A+NA +G IW +L++ G ++G + +
Sbjct: 65 PALADNVVYAADRAGLVKAMNADDGKEIWSVSLAEKDGWLSKEPALLSGGVTVAGGHVYI 124
Query: 90 NVTVAVVVAVSRSNGELVWSTQIDPRPRSQITMS-GSVYMGAFYVGLSSLEEALPADQCC 148
A V A++ S+G + W T++ S+ +S G V + L +L EA A +
Sbjct: 125 GSEKAQVYALNTSDGTVAWQTKVAGEALSRPVVSDGLVLIHTSNGQLQALNEADGAVK-W 183
Query: 149 TFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYS------GAAVWGS--SPAIDVIRRQK 200
T + L +R + GG G S G +W S A +
Sbjct: 184 TVNLDMPSLSLRGESAPATAFGAAVVGGDNGRVSAVLMQQGQMIWQQRISQATGSTEIDR 243
Query: 201 QNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIF 246
++ T P + + + Y ++ ALD+ SG+I W + LG + F
Sbjct: 244 LSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQIMWKRELGSVNDF 289
Score = 42.0 bits (97), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 63/157 (40%), Gaps = 34/157 (21%)
Query: 32 WSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLS----KLTGLSGTGI 87
W + + P V++G+V + NG L A+N +GA+ W NL L G S
Sbjct: 143 WQTKVAGEALSRPVVSDGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPAT 202
Query: 88 VVNVTVA-----VVVAVSRSNGELVW---------STQIDPRPRSQITMSGSVYMGAFYV 133
V V AV G+++W ST+ID S + + V G +
Sbjct: 203 AFGAAVVGGDNGRVSAVLMQQGQMIWQQRISQATGSTEID--RLSDVDTTPVVVNGVVF- 259
Query: 134 GLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYM 170
+ G+L LD+R+G+I+W+ +
Sbjct: 260 -------------ALAYNGNLTALDLRSGQIMWKREL 283
Score = 38.9 bits (89), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 61/131 (46%), Gaps = 19/131 (14%)
Query: 39 DISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG--LSGTGIVVNVTVAVV 96
D+ TP V NGVV+ ++NG L A++ +G ++W++ L + + G I + V
Sbjct: 246 DVDTTPVVVNGVVFALAYNGNLTALDLRSGQIMWKRELGSVNDFIVDGNRIYLVDQNDRV 305
Query: 97 VAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAK 156
+A++ G +W TQ D R + S +Y G VG S G L
Sbjct: 306 MALTIDGGVTLW-TQSDLLHR--LLTSPVLYNGNLVVGDS--------------EGYLHW 348
Query: 157 LDVRNGRIIWQ 167
++V +GR + Q
Sbjct: 349 INVEDGRFVAQ 359
>gi|395803854|ref|ZP_10483096.1| Pyrrolo-quinoline quinone [Flavobacterium sp. F52]
gi|395433973|gb|EJF99924.1| Pyrrolo-quinoline quinone [Flavobacterium sp. F52]
Length = 445
Score = 45.8 bits (107), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 54/132 (40%), Gaps = 12/132 (9%)
Query: 23 VTVRNLRLRWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTGL 82
V +N L+W+F I ++P + +YF W+G YA++ G W+ + TG
Sbjct: 190 VDAKNGTLKWNFQTKAAIHSSPILDKSTLYFGGWDGIFYALDCKTGKEKWKFSTEIKTGF 249
Query: 83 SGTGIVVNVTVAVV---------VAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYV 133
+G V+ +V A+ G+L+W + +S I S + YV
Sbjct: 250 TGIQASAAVSNGIVYFGARDPYFFALDTETGKLIWKYNAE---KSWILSSAIIKDNTVYV 306
Query: 134 GLSSLEEALPAD 145
G S L D
Sbjct: 307 GTSDTYALLALD 318
Score = 40.0 bits (92), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 27/44 (61%)
Query: 30 LRWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWE 73
L+W F + ++ ++ N +VYF S++G+ YAVNA G IW
Sbjct: 89 LKWKFKTNGAVHSSSSIYNDIVYFGSFDGHYYAVNAKTGKEIWR 132
>gi|448581243|ref|ZP_21645174.1| PQQ enzyme repeat domain protein [Haloferax gibbonsii ATCC 33959]
gi|445733781|gb|ELZ85345.1| PQQ enzyme repeat domain protein [Haloferax gibbonsii ATCC 33959]
Length = 420
Score = 45.8 bits (107), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 29/49 (59%)
Query: 31 RWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKL 79
RWSF A I TPA A+G+VY S++ +LYA++A G W + L
Sbjct: 111 RWSFEADHRIEGTPAYADGIVYIGSYDKHLYAIDAETGEERWSRAFDGL 159
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 62/146 (42%), Gaps = 13/146 (8%)
Query: 30 LRWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTGLSGTGIVV 89
+ W+F A +P VA+G VY S + LYA++A G W + + GT
Sbjct: 70 VEWTFEADGAFWGSPIVADGTVYIGSADSSLYALDAETGEDRW--SFEADHRIEGTPAYA 127
Query: 90 NVTVAV------VVAVSRSNGELVWSTQIDPRPRSQITM-SGSVYMGAFYVGLSSLEEAL 142
+ V + + A+ GE WS D R T+ G+VY G VG +L A
Sbjct: 128 DGIVYIGSYDKHLYAIDAETGEERWSRAFDGLIRGSPTVWDGTVYTG---VGCHNLACAW 184
Query: 143 PADQC-CTFRGSLAKLDVRNGRIIWQ 167
A++ + G + LD G WQ
Sbjct: 185 YAEEANVSESGWVYALDAETGETEWQ 210
>gi|114328586|ref|YP_745743.1| methanol dehydrogenase subunit 1 [Granulibacter bethesdensis
CGDNIH1]
gi|114316760|gb|ABI62820.1| methanol dehydrogenase subunit 1 [Granulibacter bethesdensis
CGDNIH1]
Length = 615
Score = 45.8 bits (107), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 76/361 (21%), Positives = 132/361 (36%), Gaps = 90/361 (24%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRN---LRLRWSFYAG--KDISATPAVANGVVY--- 52
W GD N+RY+ + +TV N L WSF G + P V V+Y
Sbjct: 57 WSMQAGDFANQRYS----ALKQITVANAGKLHPVWSFSTGVLRGHEGGPLVIGDVMYVHT 112
Query: 53 -FPSWNGYLYAVNAF-NGALIWE---------------QNLSKLTGLSGTGIVVNVTVAV 95
FP+ ++A++ NG +IW +++ I++
Sbjct: 113 PFPN---KVFALDLNDNGRVIWSYEPKQDPEVIPVMCCDTVNRGVAYGDGKIILAQADTK 169
Query: 96 VVAVSRSNGELVWS-TQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSL 154
VVA+ G+ VW T DP+ T + + VG+S E + +G L
Sbjct: 170 VVALDAKTGKEVWKVTNGDPKKGETSTSAPFIVKDKVIVGISGGEFGV--------QGRL 221
Query: 155 AKLDVRNGRIIWQTYML-PDNG------------------------GKRGGYSGAAVWG- 188
+++G+++W+ + PD+ G + G A WG
Sbjct: 222 TAYSLKDGKLVWKAFSTGPDDQILFDDKTTALGKPVGKDSSIKTWQGDQWKTGGGATWGW 281
Query: 189 --SSPAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIF 246
P ++++ N T P Q + ++ +I A D D+G W ++
Sbjct: 282 YSYDPKLNLVYYGSGNPSTWNPV---QRPGENKWSMTIFARDADTGVAKW--------VY 330
Query: 247 YFTCLVPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDI 306
T P D D +L NG+ +V ++GFA+ DR +G++
Sbjct: 331 QMT----------PHDEWDYDGINEMILADTKVNGKETKALVHFDRNGFAYVLDRVTGEL 380
Query: 307 I 307
+
Sbjct: 381 L 381
>gi|358636581|dbj|BAL23878.1| PQQ-dependent dehydrogenase, methanol/ethanol family [Azoarcus sp.
KH32C]
Length = 597
Score = 45.8 bits (107), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 58/271 (21%), Positives = 108/271 (39%), Gaps = 53/271 (19%)
Query: 20 INPVTVRNLRLRWSFYAG----KDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQN 75
+N TV+NL WSF G + + P V +G +Y + ++A++ G +W+
Sbjct: 66 VNTSTVKNLVPVWSFSFGGEKQRGQQSQPIVFDGKMYVTASYSRIFALDMKTGEKLWKYE 125
Query: 76 -------------LSKLTGLSGTGIVVNVTVAVVVAVSRSNGELVWSTQI-DPRPRSQIT 121
+++ + G ++ A +VA+ + G++VW +I D + T
Sbjct: 126 HRLPEGIMPCCDVINRGAAIYGNLVIFGTLDAQLVALDKDTGKVVWKEKIEDYKGGYSFT 185
Query: 122 MSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNGGKR--- 178
+ + G G+S E + G + D + G+++W + N G +
Sbjct: 186 AAPQIVKGMVITGVSGGEFGI--------VGKVEARDAKTGKLVWSRPTVEGNMGYKYDK 237
Query: 179 ------GGYSGA--AVW--------GSSPAIDVIRRQKQNNQTTKPTHPDQCIS-----S 217
G SG A W G++P + + N +P S
Sbjct: 238 DGKEIENGVSGTTNATWPGDLWKSGGAAPWLSAYYDPEVNLIFIGTGNPAPWNSWLRPGD 297
Query: 218 DIYANSIVALDIDSGRIAW---AKPLGGYDI 245
++Y++S VA+D D+G+I W P G+D
Sbjct: 298 NLYSSSTVAIDPDTGKIVWHYQTTPHDGWDF 328
>gi|410612520|ref|ZP_11323597.1| lipoprotein yfgL [Glaciecola psychrophila 170]
gi|410167861|dbj|GAC37486.1| lipoprotein yfgL [Glaciecola psychrophila 170]
Length = 409
Score = 45.8 bits (107), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 35/159 (22%), Positives = 68/159 (42%), Gaps = 38/159 (23%)
Query: 29 RLRWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQN----------LSK 78
+ +WS ++ A+PA+ G+V + +G+++A+NA G +W +S
Sbjct: 152 KQKWSTTVKGEVLASPAIDAGIVLINTGSGFIFALNADTGEEVWSSESDVPPLSLRGVSS 211
Query: 79 LTGLSGTGIVVNVTVAVVVAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSL 138
T ++G I+ T ++V + + G+ W I G++ L
Sbjct: 212 PTAVNGGAIIGTATGKLIVNILET-GQTAWEQVISAA-----------------TGVTEL 253
Query: 139 EEALPADQ----------CCTFRGSLAKLDVRNGRIIWQ 167
E + D ++ GSLA +++R GR+IW+
Sbjct: 254 ERIVDIDSEPLVAAGNVYVISYDGSLAAVELRTGRVIWK 292
>gi|423269636|ref|ZP_17248608.1| hypothetical protein HMPREF1079_01690 [Bacteroides fragilis
CL05T00C42]
gi|423272805|ref|ZP_17251752.1| hypothetical protein HMPREF1080_00405 [Bacteroides fragilis
CL05T12C13]
gi|392700482|gb|EIY93644.1| hypothetical protein HMPREF1079_01690 [Bacteroides fragilis
CL05T00C42]
gi|392708369|gb|EIZ01476.1| hypothetical protein HMPREF1080_00405 [Bacteroides fragilis
CL05T12C13]
Length = 621
Score = 45.8 bits (107), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 63/297 (21%), Positives = 116/297 (39%), Gaps = 47/297 (15%)
Query: 24 TVRNLRLRWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSK----- 78
T++ R WSF +GK I TPA +G+V F S + +Y ++A G W +++
Sbjct: 324 TLKEGRKLWSFQSGKRIVGTPAATDGIVVFGSADHNIYGLDAVTGKERWRITVAQPVLGA 383
Query: 79 LTGLSGTGIVVNVTVAVVVAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSL 138
+T G + + + A+ NG++VW+ Y G+
Sbjct: 384 VTIEKGIA-YIGGSDSTFRAIRIKNGKVVWT----------------------YTGIKGY 420
Query: 139 EEALP---ADQCC--TFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYSGAAVWGSSPAI 193
E P D+ + +L L+ NG+ +W+ G R +S AAVW +
Sbjct: 421 IETKPLVEGDKVIFGAWDNTLYALNKSNGKELWKW----TGGLTRMHFSPAAVWPVAAHG 476
Query: 194 DVIRRQKQNNQTTKPTHPDQCI--SSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCL 251
V Q T + + + + L + +I ++K + + Y T
Sbjct: 477 KVFITDPQRAMTAISLKTGKTVWRTFQSMVRETIGLSANKNQI-YSKTMNDSVVCYST-- 533
Query: 252 VPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDIIW 308
+ + P N+ + AP + + +G +V + K G +A D +G ++W
Sbjct: 534 ISDTPKEIWASNVGFGYEHAPS-MQMEKDG----IVFSSTKEGLIFALDASTGQVLW 585
>gi|297172895|gb|ADI23857.1| glucose dehydrogenase [uncultured gamma proteobacterium
HF4000_48E10]
Length = 569
Score = 45.8 bits (107), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 63/289 (21%), Positives = 110/289 (38%), Gaps = 61/289 (21%)
Query: 62 AVNAFNGALIWEQNLS----------KLTGLS-------GTGIVVNVTVAV-VVAVSRSN 103
A++A G L+W L+ KL+G G G+++ VT +VA++
Sbjct: 18 ALDAATGELLWMHRLNEGERGEAAPRKLSGRGLTYWDDGGNGVILYVTPGYQLVALNART 77
Query: 104 G------------ELVWSTQIDPRPRSQITMSGS--VYMGAFYVGLSSLEEALPADQCCT 149
G +L + D P S+I + + V +G + L P +
Sbjct: 78 GARIQSFGDGGIVDLKQNIDQDLEPTSEIGLHAAPIVAGNTIIIGAAHLPGGAPPSRT-N 136
Query: 150 FRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYSGAAVWGSSPAIDVIRRQKQNNQTTKPT 209
+G + D+R G W + +PD W S+ V + + +
Sbjct: 137 VKGYVRGFDLRIGDRKWIFHTIPDADEFGNDSWLNDSWRSTGNTGVWAQMSIDPELNMVY 196
Query: 210 HPDQCISSD----------IYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCP 259
P + + D ++A S+VA+D+D+G AW +DI+
Sbjct: 197 FPVEAPTGDYYGGHRHGDNLFAGSVVAVDLDTGERAWHYQTVHHDIW------------- 243
Query: 260 PGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDIIW 308
D D AP+LL I+ +GR +V K + + DR +G+ +W
Sbjct: 244 -----DWDLPAAPVLLDITVDGRAIKALVLPTKQSYMFVLDRVTGEPVW 287
>gi|167041667|gb|ABZ06412.1| putative PQQ enzyme repeat protein [uncultured marine microorganism
HF4000_009L19]
Length = 659
Score = 45.8 bits (107), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 81/385 (21%), Positives = 137/385 (35%), Gaps = 84/385 (21%)
Query: 1 WLNHGGDLNNRRYAYGE------------VLINPVTVRNLRLRW-SFYAGKDISATPAVA 47
W +GGD RYA + V P L RW ++ +TP +
Sbjct: 41 WRVNGGDSGFTRYASLDQISADTVHDLAIVWRRPAVDATLHTRWPDLRYSNNLRSTPVMV 100
Query: 48 NGVVYFPSWNGYLYAVNAFNGALIWEQNLSKL-----TGLSGTGI------------VVN 90
GV+Y + G + A + +G +W Q L G G+ +++
Sbjct: 101 GGVLYASNGIGLVEAFDPASGQTLWVQETPFLGDETPRGAPNRGVGYWEDEGGAARRILS 160
Query: 91 VTVAVVVAVSRSNGELVW----STQIDPRPRSQI--------TMSGSVYMGAFYVGLSSL 138
V ++A+ G L+ + +D R + + V VG +
Sbjct: 161 VRPPYLLAIDVETGRLIEDFGDAGTVDLRVYADTPELVDYSWSSPPLVVRDVVIVGSAMA 220
Query: 139 EEALPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYSGAAVW-----GSSPAI 193
+ L +Q G + DVR G + W +P R G G W S
Sbjct: 221 DHPLTKEQRP---GYVRAYDVRTGELRWTWNPIP-----RAGEPGVETWLDDSWAYSGMA 272
Query: 194 DVIRRQKQNNQTTKPTHPDQCISSDIY----------ANSIVALDIDSGRIAWAKPLGGY 243
+V + + P ++D+Y ANS+V + ++G W + +
Sbjct: 273 NVWTMMSADEELGLVYLPTGAPTNDMYGGHRPGNNLFANSLVCVRAETGEQVWHFQMVHH 332
Query: 244 DIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDS 303
D++ D D AP+L+ I+ +GR VV + K A+ FDR +
Sbjct: 333 DLW------------------DYDNNVAPILMDITVDGREIKAVVQLTKQAIAYVFDRVT 374
Query: 304 GDIIWFKLAGP-GGREGGGVWGAAT 327
G+ +W + P G + G W + T
Sbjct: 375 GEPVWPIVERPVPGSQTPGEWISPT 399
>gi|452207299|ref|YP_007487421.1| PQQ repeat protein / protein kinase domain protein [Natronomonas
moolapensis 8.8.11]
gi|452083399|emb|CCQ36693.1| PQQ repeat protein / protein kinase domain protein [Natronomonas
moolapensis 8.8.11]
Length = 725
Score = 45.8 bits (107), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 54/108 (50%), Gaps = 11/108 (10%)
Query: 31 RWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTGLSGTGIVVN 90
+W F IS++P V + +V F S++G LYA+N+ G W S+ G + V +
Sbjct: 174 KWKFETNDRISSSPVVKDDIVLFGSYDGNLYALNSETGEQRW---ASETGGGQSSPTVAD 230
Query: 91 VTVAV-------VVAVSRSNGELVWSTQIDPRPRSQITM-SGSVYMGA 130
TV + V A +G+L W + D S T+ +GSV++G+
Sbjct: 231 ETVYIGGWQDGNVYAFDVDSGDLRWEFETDDIVSSSPTVAAGSVFVGS 278
Score = 42.0 bits (97), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 72/178 (40%), Gaps = 8/178 (4%)
Query: 30 LRWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTGLSGTGIVV 89
LRW F +S++P VA G V+ S + +YA++A +G W S T +
Sbjct: 253 LRWEFETDDIVSSSPTVAAGSVFVGSADNNVYAIDADSGEPEWVFQTGSTVASSPTVVGE 312
Query: 90 NVTVAV----VVAVSRSNGELVWSTQI-DPRPRSQITMSGSVYMGAFYVGLSSLEEALPA 144
V + V A+ + G +W + D S I + G VY+G+ + AL A
Sbjct: 313 RVFIGSGDGNVYALDSTEGTEIWRFETNDEVSSSPIVVDGVVYIGSREGRDEGIIYALEA 372
Query: 145 DQCCTFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYSGAAVWGSSPAIDVIRRQKQN 202
+ GS A N W+ N +SG G++P + RR ++
Sbjct: 373 GIDGSSEGSRAHDGSLNHHETWRHAGQDIN---IDAFSGGDDGGTNPVAAIFRRASED 427
>gi|420259493|ref|ZP_14762199.1| outer membrane biogenesis protein BamB [Yersinia enterocolitica
subsp. enterocolitica WA-314]
gi|404513049|gb|EKA26878.1| outer membrane biogenesis protein BamB [Yersinia enterocolitica
subsp. enterocolitica WA-314]
Length = 393
Score = 45.8 bits (107), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 66/161 (40%), Gaps = 36/161 (22%)
Query: 29 RLRWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLS----KLTGLSG 84
++ W + + P V++GVV + NG L A+N +GA+ W NL L G S
Sbjct: 141 QVAWQTVVAGEALSRPVVSDGVVLIHTSNGMLQALNESDGAIKWTLNLDTPALSLRGESA 200
Query: 85 TGIVVNVTVA-----VVVAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLE 139
+ + V AV G+L+W +I SQ+T G + ++
Sbjct: 201 PTVAFGAALVGGDNGRVSAVMLEQGQLIWQQRI-----SQVT------------GTTEID 243
Query: 140 EALPADQ----------CCTFRGSLAKLDVRNGRIIWQTYM 170
D + G+L LD+R+G+I+W+ M
Sbjct: 244 RLNDVDTTPVVVDGVVYALAYNGNLTALDLRSGQILWKREM 284
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 85/197 (43%), Gaps = 40/197 (20%)
Query: 51 VYFPSWNGYLYAVNAFNGALIWE-----QNLSKLTGLSGTGIVVNVTVAVVVAVSRSNGE 105
VY S +YA+N+ +G + W+ + LS+ G ++++ + ++ A++ S+G
Sbjct: 123 VYVGSEKAVVYALNSDDGQVAWQTVVAGEALSRPVVSDGV-VLIHTSNGMLQALNESDGA 181
Query: 106 LVWSTQIDPRPRSQITMSG-SVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRI 164
+ W+ +D S S +V GA VG + G ++ + + G++
Sbjct: 182 IKWTLNLDTPALSLRGESAPTVAFGAALVGGDN--------------GRVSAVMLEQGQL 227
Query: 165 IWQTYMLPDNGGKRGGYSGAAVWGSSPAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSI 224
IWQ + G + ID + N+ T P D + + Y ++
Sbjct: 228 IWQQRISQVTG--------------TTEID-----RLNDVDTTPVVVDGVVYALAYNGNL 268
Query: 225 VALDIDSGRIAWAKPLG 241
ALD+ SG+I W + +G
Sbjct: 269 TALDLRSGQILWKREMG 285
>gi|288960261|ref|YP_003450601.1| alcohol dehydrogenase (acceptor) [Azospirillum sp. B510]
gi|288912569|dbj|BAI74057.1| alcohol dehydrogenase (acceptor) [Azospirillum sp. B510]
Length = 584
Score = 45.8 bits (107), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 69/320 (21%), Positives = 121/320 (37%), Gaps = 53/320 (16%)
Query: 20 INPVTVRNLRLRWSFYAG----KDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQN 75
+N TV+ L WSF G + A P + +G +Y LYAV+A G WE N
Sbjct: 61 LNADTVKKLVPVWSFSFGGEKQRGQEAQPIIYDGTIYVTGSYSRLYAVDARTGHKKWEYN 120
Query: 76 LSKLTGLSGTGIVVNVTVAV-------------VVAVSRSNGELVWSTQIDPRPR----- 117
G+ VVN A+ +VA++R G++VW+ ++
Sbjct: 121 HRLPDGIMPCCDVVNRGAAIYKDKIYFATLDARLVALNRETGKVVWNKKLQEYKEGYSNT 180
Query: 118 -SQITMSGSVYMG--AFYVGLSSLEEALPAD------QCCTFRGSLAKLDVRNGRIIWQT 168
+ + + G + G G+ + EA A+ Q T G++ L+ ++ + +T
Sbjct: 181 AAPLIIDGKIITGNSGGEFGVVGMVEARDAETGELVWQRPTIEGNMGTLNGKDSTVTGKT 240
Query: 169 YM-LPDNGGKRGGYSGAAVWGSSPAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVAL 227
P + K GG A W + P + ++Y +S +A+
Sbjct: 241 NASWPGDMYKTGG---GATWLGGTYDPETKTLFFGTGNPAPWNSHLRPGDNLYTSSTLAI 297
Query: 228 DIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVV 287
+ D+G I W Y T P D D + ++ +G+
Sbjct: 298 NPDNGEIKW---------HYQTT---------PHDGWDFDGVNEFVSFDLNKDGKVIKAG 339
Query: 288 VAVQKSGFAWAFDRDSGDII 307
++GF + DR++G +I
Sbjct: 340 GKADRNGFFYVIDRNTGKLI 359
>gi|254284070|ref|ZP_04959038.1| quinoprotein glucose dehydrogenase-A [gamma proteobacterium
NOR51-B]
gi|219680273|gb|EED36622.1| quinoprotein glucose dehydrogenase-A [gamma proteobacterium
NOR51-B]
Length = 654
Score = 45.8 bits (107), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 70/174 (40%), Gaps = 40/174 (22%)
Query: 151 RGSLAKLDVRNGRIIWQTYMLPDNGG------------KRGGYSGAAVWGSSPAIDVIRR 198
RG + D R G+ W +P + G + G + +V S A+D++
Sbjct: 225 RGVVYGFDARTGQPAWTFDPIPQDSGPTDSDWLEGSRHRTGAANMWSVMSSDEALDLLFI 284
Query: 199 QKQNNQTTKPTHPD----QCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPN 254
T+ P PD + + Y NS+VAL +G + W+ L +D++
Sbjct: 285 P-----TSSPA-PDYYGGERPGDNRYGNSLVALKASTGEVVWSFQLVHHDVW-------- 330
Query: 255 NPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDIIW 308
D D P L+TI NG VV K GF + FDR +G+ ++
Sbjct: 331 ----------DYDTPAQPTLMTIDKNGMAIPAVVQTTKHGFIFVFDRRTGEPLF 374
>gi|386311738|ref|YP_006007794.1| outer membrane protein YfgL, lipoprotein component of the protein
assembly complex (forms a complex with YaeT, YfiO, and
NlpB) [Yersinia enterocolitica subsp. palearctica Y11]
gi|418241094|ref|ZP_12867627.1| outer membrane biogenesis protein BamB [Yersinia enterocolitica
subsp. palearctica PhRBD_Ye1]
gi|433548010|ref|ZP_20504060.1| Outer membrane protein YfgL, lipoprotein component of the protein
assembly complex (forms a complex with YaeT, YfiO, and
NlpB) [Yersinia enterocolitica IP 10393]
gi|318606737|emb|CBY28235.1| outer membrane protein YfgL, lipoprotein component of the protein
assembly complex (forms a complex with YaeT, YfiO, and
NlpB) [Yersinia enterocolitica subsp. palearctica Y11]
gi|351779578|gb|EHB21684.1| outer membrane biogenesis protein BamB [Yersinia enterocolitica
subsp. palearctica PhRBD_Ye1]
gi|431790570|emb|CCO67100.1| Outer membrane protein YfgL, lipoprotein component of the protein
assembly complex (forms a complex with YaeT, YfiO, and
NlpB) [Yersinia enterocolitica IP 10393]
Length = 393
Score = 45.8 bits (107), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 66/161 (40%), Gaps = 36/161 (22%)
Query: 29 RLRWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLS----KLTGLSG 84
++ W + + P V++GVV + NG L A+N +GA+ W NL L G S
Sbjct: 141 QVAWQTVVAGEALSRPVVSDGVVLIHTSNGMLQALNESDGAIKWTLNLDTPALSLRGESA 200
Query: 85 TGIVVNVTVA-----VVVAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLE 139
+ + V AV G+L+W +I SQ+T G + ++
Sbjct: 201 PTVAFGAALVGGDNGRVSAVMLEQGQLIWQQRI-----SQVT------------GTTEID 243
Query: 140 EALPADQ----------CCTFRGSLAKLDVRNGRIIWQTYM 170
D + G+L LD+R+G+I+W+ M
Sbjct: 244 RLNDVDTTPVVVDGVVYALAYNGNLTALDLRSGQILWKREM 284
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 85/197 (43%), Gaps = 40/197 (20%)
Query: 51 VYFPSWNGYLYAVNAFNGALIWE-----QNLSKLTGLSGTGIVVNVTVAVVVAVSRSNGE 105
VY S +YA+N+ +G + W+ + LS+ G ++++ + ++ A++ S+G
Sbjct: 123 VYVGSEKAVVYALNSDDGQVAWQTVVAGEALSRPVVSDGV-VLIHTSNGMLQALNESDGA 181
Query: 106 LVWSTQIDPRPRSQITMSG-SVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRI 164
+ W+ +D S S +V GA VG + G ++ + + G++
Sbjct: 182 IKWTLNLDTPALSLRGESAPTVAFGAALVGGDN--------------GRVSAVMLEQGQL 227
Query: 165 IWQTYMLPDNGGKRGGYSGAAVWGSSPAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSI 224
IWQ + G + ID + N+ T P D + + Y ++
Sbjct: 228 IWQQRISQVTG--------------TTEID-----RLNDVDTTPVVVDGVVYALAYNGNL 268
Query: 225 VALDIDSGRIAWAKPLG 241
ALD+ SG+I W + +G
Sbjct: 269 TALDLRSGQILWKREMG 285
>gi|116624422|ref|YP_826578.1| pyrrolo-quinoline quinone [Candidatus Solibacter usitatus
Ellin6076]
gi|116227584|gb|ABJ86293.1| Pyrrolo-quinoline quinone [Candidatus Solibacter usitatus
Ellin6076]
Length = 564
Score = 45.8 bits (107), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 69/166 (41%), Gaps = 30/166 (18%)
Query: 152 GSLAKLDVRNGRIIWQTYMLPDNGGKRG----------GYSGAAVW--GSSPAIDVIRRQ 199
G L D G + W+ Y +P G G + G VW GS + +
Sbjct: 226 GFLQSRDPETGALQWKWYSVPMKKGDPGMETWGDVDTASHGGGNVWIPGSYDPENHLYIF 285
Query: 200 KQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCP 259
N + T+P ++Y +IVAL++D+G++ W +Y T
Sbjct: 286 GTGNPSPAYTNPPGRNGDNLYTCAIVALNVDTGKLVW---------YYQTS--------- 327
Query: 260 PGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGD 305
P D+D E P+L+ G+ R +V+ ++G+ + DR +G+
Sbjct: 328 PHDTHDSDSTETPILVDGEFQGKPRKMVLHASRNGYYFTLDRLTGE 373
>gi|320160920|ref|YP_004174144.1| putative protein kinase [Anaerolinea thermophila UNI-1]
gi|319994773|dbj|BAJ63544.1| putative protein kinase [Anaerolinea thermophila UNI-1]
Length = 630
Score = 45.8 bits (107), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 61/142 (42%), Gaps = 22/142 (15%)
Query: 30 LRWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTGLSGTG--- 86
++W F A + I ++P V G ++F S + LY+V+A G IW + K + S
Sbjct: 475 VKWRFKAKRAIYSSPLVVKGSLFFTSLDSILYSVDARTGWAIWRFRMGKGSVSSPCNVEN 534
Query: 87 -IVVNVTVAVVVAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPAD 145
I+V + V + +W + D Q++ S VY + Y G +
Sbjct: 535 YIIVGSADGFIYCVDGGTSKEIWRFKTD----HQVSGSPLVYRDSVYCGAAD-------- 582
Query: 146 QCCTFRGSLAKLDVRNGRIIWQ 167
G+L L+ R GR+ W+
Sbjct: 583 ------GNLYCLEYRTGRLRWK 598
Score = 41.6 bits (96), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Query: 12 RYAYGEVLINPVTVRNLRLRWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALI 71
R A +LI+ + N + W+F +I PA NG++Y S++ LYAV+A +G +
Sbjct: 300 RIATKSLLIS--SEENTKPLWTFECEDEIRGGPAFENGLIYVGSYDNNLYAVDATDGKFV 357
Query: 72 WE 73
W+
Sbjct: 358 WK 359
>gi|317049133|ref|YP_004116781.1| outer membrane assembly lipoprotein YfgL [Pantoea sp. At-9b]
gi|316950750|gb|ADU70225.1| outer membrane assembly lipoprotein YfgL [Pantoea sp. At-9b]
Length = 393
Score = 45.8 bits (107), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 89/240 (37%), Gaps = 59/240 (24%)
Query: 44 PAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTGL---------------SGTGIV 88
PA +G VY G + A++A NG W+ NLS+ TG +G I
Sbjct: 65 PAWQDGTVYAADRFGIVKALDASNGKEKWKVNLSEKTGFFSKNISALLSGGVTANGDHIF 124
Query: 89 VNVTVAVVVAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCC 148
+ V A++ S+G + W T++ S+ +S + +
Sbjct: 125 IGSERGQVYALNTSDGSIAWQTKVAGEALSRPVVSDGLVL------------------IH 166
Query: 149 TFRGSLAKLDVRNGRIIWQTYMLPDNGGKRG------GYSGAAVWGSSPAID-VIRRQKQ 201
T G L LD G I W + RG + GA V G + + VI Q Q
Sbjct: 167 TSNGQLQGLDQATGAIKWSVNLDMPALSLRGESAPAVAFGGAIVGGDNGRVSAVIMNQGQ 226
Query: 202 -------------------NNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGG 242
N+ T P + + + Y ++ ALD+ SG+I W + +GG
Sbjct: 227 LIWQQRISQPSGATEIDRLNDVDTTPVIVNGVVYALAYNGNLTALDLRSGQIIWKREIGG 286
Score = 41.2 bits (95), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 61/148 (41%), Gaps = 18/148 (12%)
Query: 30 LRWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLS----KLTGLSGT 85
+ W + + P V++G+V + NG L ++ GA+ W NL L G S
Sbjct: 142 IAWQTKVAGEALSRPVVSDGLVLIHTSNGQLQGLDQATGAIKWSVNLDMPALSLRGESAP 201
Query: 86 -----GIVVNVTVAVVVAVSRSNGELVWSTQI-DPRPRSQITMSGSVYMGAFYVGLSSLE 139
G +V V AV + G+L+W +I P ++I V V
Sbjct: 202 AVAFGGAIVGGDNGRVSAVIMNQGQLIWQQRISQPSGATEIDRLNDVDTTPVIVN----- 256
Query: 140 EALPADQCCTFRGSLAKLDVRNGRIIWQ 167
+ G+L LD+R+G+IIW+
Sbjct: 257 ---GVVYALAYNGNLTALDLRSGQIIWK 281
Score = 38.5 bits (88), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 28/44 (63%)
Query: 39 DISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTGL 82
D+ TP + NGVVY ++NG L A++ +G +IW++ + + L
Sbjct: 247 DVDTTPVIVNGVVYALAYNGNLTALDLRSGQIIWKREIGGVKDL 290
>gi|94971193|ref|YP_593241.1| Pyrrolo-quinoline quinone [Candidatus Koribacter versatilis
Ellin345]
gi|94553243|gb|ABF43167.1| Pyrrolo-quinoline quinone [Candidatus Koribacter versatilis
Ellin345]
Length = 432
Score = 45.8 bits (107), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 31/51 (60%)
Query: 23 VTVRNLRLRWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWE 73
V + +L+W F G I ++PAV +GVVY S++G YAV+A G W+
Sbjct: 77 VDLETGKLKWKFETGARIVSSPAVVDGVVYVASYDGNFYAVDAVTGKEKWK 127
Score = 45.4 bits (106), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 34/61 (55%)
Query: 13 YAYGEVLINPVTVRNLRLRWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIW 72
+ G+ + + + L+W F G + A+PA+A+G +Y SW+ Y YA++A G W
Sbjct: 171 FGSGDTNVYALNAADGSLKWKFKTGDVVHASPALADGTLYVGSWDSYFYAIDAATGKEKW 230
Query: 73 E 73
+
Sbjct: 231 K 231
>gi|340781647|ref|YP_004748254.1| hypothetical protein Atc_0905 [Acidithiobacillus caldus SM-1]
gi|340555800|gb|AEK57554.1| conserved hypothetical protein [Acidithiobacillus caldus SM-1]
Length = 485
Score = 45.8 bits (107), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 68/163 (41%), Gaps = 18/163 (11%)
Query: 20 INPVTVRNLRLRWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKL 79
I + + LRW + + TP NG + F + +G++YA+ A NG L+W+ ++
Sbjct: 202 IEAIDTNDGMLRWVYPTKGEDMPTPVFVNGKIIFGNGDGHVYALGAENGTLLWKTSIDSF 261
Query: 80 TGLS------GTGIVV--NVTVAVVVAVSRSNGELVWSTQIDPRPRSQITMSGS----VY 127
+S G IVV + + +S +G+++W PR + SG
Sbjct: 262 VSMSSATPADGGQIVVLGGTHPSAIYGISSVSGKILWKVY----PRGIYSSSGGDGTWAA 317
Query: 128 MGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYM 170
G VG + A A + L+ R+G ++W +
Sbjct: 318 QGNVVVGQIEIHRAAQAKGMSS--SEEIALNARSGHVLWSKVL 358
>gi|218548051|ref|YP_002381842.1| outer membrane protein assembly complex subunit YfgL [Escherichia
fergusonii ATCC 35469]
gi|422806468|ref|ZP_16854900.1| outer membrane assembly lipoprotein YfgL [Escherichia fergusonii
B253]
gi|218355592|emb|CAQ88203.1| protein assembly complex, lipoprotein component [Escherichia
fergusonii ATCC 35469]
gi|324113006|gb|EGC06982.1| outer membrane assembly lipoprotein YfgL [Escherichia fergusonii
B253]
Length = 392
Score = 45.8 bits (107), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 94/226 (41%), Gaps = 24/226 (10%)
Query: 44 PAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG--------------LSGTGIVV 89
PA+A+ VVY G + AVNA +G IW +L++ G ++G + V
Sbjct: 65 PALADNVVYAADRAGVVKAVNADDGKEIWSISLAEKDGWLSKTPALLSGGVTVAGGKVYV 124
Query: 90 NVTVAVVVAVSRSNGELVWSTQIDPRPRSQITMS-GSVYMGAFYVGLSSLEEALPADQCC 148
A V A++ +G + W T++ S+ +S G V + L +L EA A +
Sbjct: 125 GSEKAQVYALNAGDGTVAWQTKVAGEALSRPVVSDGLVLIHTSNGQLQALNEADGAIK-W 183
Query: 149 TFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYS------GAAVWGS--SPAIDVIRRQK 200
T + L +R + GG G S G +W S A +
Sbjct: 184 TVNLDMPSLSLRGESAPATAFGAAIVGGDNGRVSAVLMQQGQMIWQQRISQATGSTEIDR 243
Query: 201 QNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIF 246
++ T P + + + Y ++ ALD+ SG+I W + LG + F
Sbjct: 244 LSDVDTTPVVVNGVVYALAYNGNLTALDLRSGQIMWKRELGSVNDF 289
Score = 43.1 bits (100), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 63/157 (40%), Gaps = 34/157 (21%)
Query: 32 WSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLS----KLTGLSGTGI 87
W + + P V++G+V + NG L A+N +GA+ W NL L G S
Sbjct: 143 WQTKVAGEALSRPVVSDGLVLIHTSNGQLQALNEADGAIKWTVNLDMPSLSLRGESAPAT 202
Query: 88 VVNVTVA-----VVVAVSRSNGELVW---------STQIDPRPRSQITMSGSVYMGAFYV 133
+ V AV G+++W ST+ID S + + V G Y
Sbjct: 203 AFGAAIVGGDNGRVSAVLMQQGQMIWQQRISQATGSTEID--RLSDVDTTPVVVNGVVY- 259
Query: 134 GLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYM 170
+ G+L LD+R+G+I+W+ +
Sbjct: 260 -------------ALAYNGNLTALDLRSGQIMWKREL 283
>gi|424815435|ref|ZP_18240586.1| outer membrane protein assembly complex subunit YfgL [Escherichia
fergusonii ECD227]
gi|325496455|gb|EGC94314.1| outer membrane protein assembly complex subunit YfgL [Escherichia
fergusonii ECD227]
Length = 392
Score = 45.8 bits (107), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 94/226 (41%), Gaps = 24/226 (10%)
Query: 44 PAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG--------------LSGTGIVV 89
PA+A+ VVY G + AVNA +G IW +L++ G ++G + V
Sbjct: 65 PALADNVVYAADRAGVVKAVNADDGKEIWSISLAEKDGWLSKTPALLSGGVTVAGGKVYV 124
Query: 90 NVTVAVVVAVSRSNGELVWSTQIDPRPRSQITMS-GSVYMGAFYVGLSSLEEALPADQCC 148
A V A++ +G + W T++ S+ +S G V + L +L EA A +
Sbjct: 125 GSEKAQVYALNAGDGTVAWQTKVAGEALSRPVVSDGLVLIHTSNGQLQALNEADGAIK-W 183
Query: 149 TFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYS------GAAVWGS--SPAIDVIRRQK 200
T + L +R + GG G S G +W S A +
Sbjct: 184 TVNLDMPSLSLRGESAPATAFGAAIVGGDNGRVSAVLMQQGQMIWQQRISQATGSTEIDR 243
Query: 201 QNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIF 246
++ T P + + + Y ++ ALD+ SG+I W + LG + F
Sbjct: 244 LSDVDTTPVVVNGVVYALAYNGNLTALDLRSGQIMWKRELGSVNDF 289
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 63/157 (40%), Gaps = 34/157 (21%)
Query: 32 WSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLS----KLTGLSGTGI 87
W + + P V++G+V + NG L A+N +GA+ W NL L G S
Sbjct: 143 WQTKVAGEALSRPVVSDGLVLIHTSNGQLQALNEADGAIKWTVNLDMPSLSLRGESAPAT 202
Query: 88 VVNVTVA-----VVVAVSRSNGELVW---------STQIDPRPRSQITMSGSVYMGAFYV 133
+ V AV G+++W ST+ID S + + V G Y
Sbjct: 203 AFGAAIVGGDNGRVSAVLMQQGQMIWQQRISQATGSTEID--RLSDVDTTPVVVNGVVY- 259
Query: 134 GLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYM 170
+ G+L LD+R+G+I+W+ +
Sbjct: 260 -------------ALAYNGNLTALDLRSGQIMWKREL 283
>gi|397676686|ref|YP_006518224.1| pyrrolo-quinoline quinone repeat-containing protein [Zymomonas
mobilis subsp. mobilis ATCC 29191]
gi|395397375|gb|AFN56702.1| Pyrrolo-quinoline quinone repeat-containing protein [Zymomonas
mobilis subsp. mobilis ATCC 29191]
Length = 494
Score = 45.8 bits (107), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 63/134 (47%), Gaps = 20/134 (14%)
Query: 39 DISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG--LSGTGIVVNVTVAVV 96
DI+A P + +G VY G + AV+ F G +WE N+S + + G I V A +
Sbjct: 341 DINAFPVIDSGHVYAVGQGGRMVAVDLFMGQRLWELNISGFSTPWVVGQWIFVVTMDAKL 400
Query: 97 VAVSRSNGELVWSTQI----DPRPRS-QITMSGSVYMGAFYVGLSSLEEALPADQCCTFR 151
+A+ RSNG + W +++ +P ++ I +G V G + R
Sbjct: 401 LAIQRSNGHIRWMSELKAWANPSKKTGPINWNGPVLAGGRLI-------------LTNNR 447
Query: 152 GSLAKLDVRNGRII 165
G L ++D +G++I
Sbjct: 448 GELIEVDPADGQMI 461
>gi|419955113|ref|ZP_14471245.1| quinoprotein alcohol dehydrogenase [Pseudomonas stutzeri TS44]
gi|387968097|gb|EIK52390.1| quinoprotein alcohol dehydrogenase [Pseudomonas stutzeri TS44]
Length = 590
Score = 45.8 bits (107), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 79/183 (43%), Gaps = 27/183 (14%)
Query: 2 LNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAG----KDISATPAVANGVVYFPSWN 57
+ +G L +RY+ L N V+ LR W+F G + A P + +GV+Y
Sbjct: 45 VTNGLGLQGQRYSPLSTL-NTENVQQLRPVWAFSLGGEKQRGQEAQPLIKDGVMYITGSY 103
Query: 58 GYLYAVNAFNGALIWEQNLSKLTGLSGTGIVVNVTVAV-------------VVAVSRSNG 104
+YAV+A G +W+ + G+ V+N VA+ +VA+++ G
Sbjct: 104 SRVYAVDARTGKELWQYDARLPDGIMPCCDVINRGVALYDDLVIFGTLDAKLVALNKDTG 163
Query: 105 ELVWSTQI-DPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGR 163
++VW + D + +T + + G G+S E + G + + +NG
Sbjct: 164 KVVWKKTVADYKAGYSLTAAPLIVKGKLITGVSGGEFGV--------VGKIEAYNPKNGE 215
Query: 164 IIW 166
++W
Sbjct: 216 LLW 218
>gi|290475996|ref|YP_003468892.1| serine/threonine protein kinase with quinoprotein alcohol
dehydrogenase domain [Xenorhabdus bovienii SS-2004]
gi|289175325|emb|CBJ82128.1| putative serine/threonine protein kinase with quinoprotein alcohol
dehydrogenase domain [Xenorhabdus bovienii SS-2004]
Length = 390
Score = 45.8 bits (107), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 35/150 (23%), Positives = 66/150 (44%), Gaps = 16/150 (10%)
Query: 27 NLRLRWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLS----KLTGL 82
N ++ W + + P V++G+V + NG L A+N NG+ +W N+ + G
Sbjct: 136 NGKVEWESSVAGEALSRPVVSDGLVLIHTGNGLLQALNETNGSAVWSVNMDTPSLSVRGE 195
Query: 83 SGTGIVVNVTVA-----VVVAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSS 137
S + + + AV S G+L+W +I M+GS +G +
Sbjct: 196 SAPAVAYGAAIVGGDNGRISAVLMSQGQLIWQQRI-------AQMTGSTEIGRLNDVDMT 248
Query: 138 LEEALPADQCCTFRGSLAKLDVRNGRIIWQ 167
+ + G+L +D+R+G++IW+
Sbjct: 249 PVISNNIIYAIAYNGNLVAMDMRSGQLIWK 278
>gi|260753035|ref|YP_003225928.1| pyrrolo-quinoline quinone [Zymomonas mobilis subsp. mobilis NCIMB
11163]
gi|283856261|ref|YP_162187.2| pyrrolo-quinoline quinone [Zymomonas mobilis subsp. mobilis ZM4]
gi|258552398|gb|ACV75344.1| Pyrrolo-quinoline quinone [Zymomonas mobilis subsp. mobilis NCIMB
11163]
gi|283775256|gb|AAV89076.2| Pyrrolo-quinoline quinone [Zymomonas mobilis subsp. mobilis ZM4]
Length = 494
Score = 45.8 bits (107), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 63/134 (47%), Gaps = 20/134 (14%)
Query: 39 DISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG--LSGTGIVVNVTVAVV 96
DI+A P + +G VY G + AV+ F G +WE N+S + + G I V A +
Sbjct: 341 DINAFPVIDSGHVYAVGQGGRMVAVDLFMGQRLWELNISGFSTPWVVGQWIFVVTMDAKL 400
Query: 97 VAVSRSNGELVWSTQI----DPRPRS-QITMSGSVYMGAFYVGLSSLEEALPADQCCTFR 151
+A+ RSNG + W +++ +P ++ I +G V G + R
Sbjct: 401 LAIQRSNGHIRWMSELKAWANPSKKTGPINWNGPVLAGGRLI-------------LTNNR 447
Query: 152 GSLAKLDVRNGRII 165
G L ++D +G++I
Sbjct: 448 GELIEVDPADGQMI 461
>gi|198243095|ref|YP_002216583.1| outer membrane protein assembly complex subunit YfgL [Salmonella
enterica subsp. enterica serovar Dublin str.
CT_02021853]
gi|375120072|ref|ZP_09765239.1| outer membrane assembly lipoprotein YfgL [Salmonella enterica
subsp. enterica serovar Dublin str. SD3246]
gi|445140339|ref|ZP_21384897.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Dublin str. SL1438]
gi|445150601|ref|ZP_21389817.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Dublin str. HWS51]
gi|197937611|gb|ACH74944.1| outer membrane assembly lipoprotein YfgL [Salmonella enterica
subsp. enterica serovar Dublin str. CT_02021853]
gi|326624339|gb|EGE30684.1| outer membrane assembly lipoprotein YfgL [Salmonella enterica
subsp. enterica serovar Dublin str. SD3246]
gi|444852365|gb|ELX77445.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Dublin str. SL1438]
gi|444856760|gb|ELX81784.1| outer membrane biogenesis protein BamB [Salmonella enterica subsp.
enterica serovar Dublin str. HWS51]
Length = 392
Score = 45.8 bits (107), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 90/238 (37%), Gaps = 48/238 (20%)
Query: 44 PAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG--------------LSGTGIVV 89
P +A+ VVY G + A+NA +G IW NL + G ++G + +
Sbjct: 65 PVMADNVVYAADRAGVVKALNADDGKEIWSVNLGEKDGWFSRSSALLSGGVTVAGGHVYI 124
Query: 90 NVTVAVVVAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCC- 148
A V A++ S+G W T++ S+ +S + + + L+ AD
Sbjct: 125 GSEKAEVYALNTSDGTTAWQTKVAGEALSRPVVSDGIVL--IHTSNDQLQALNQADGAIK 182
Query: 149 -TFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYS------GAAVWGSSPAIDVIRRQKQ 201
T + L +R + GG G S G +W Q++
Sbjct: 183 WTVNLDMPSLSLRGESAPATAFGAAIVGGDNGRVSAVLMQQGQMIW-----------QQR 231
Query: 202 NNQTTKPTHPDQCISSDI-------------YANSIVALDIDSGRIAWAKPLGGYDIF 246
+Q T PT D+ D Y ++ ALD+ SG+I W + LG + F
Sbjct: 232 ISQATGPTEIDRLSDVDTTPVVVNGVVYALAYNGNLTALDLRSGQIMWKRELGSVNDF 289
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 60/155 (38%), Gaps = 30/155 (19%)
Query: 32 WSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLS----KLTGLSGTGI 87
W + + P V++G+V + N L A+N +GA+ W NL L G S
Sbjct: 143 WQTKVAGEALSRPVVSDGIVLIHTSNDQLQALNQADGAIKWTVNLDMPSLSLRGESAPAT 202
Query: 88 VVNVTVA-----VVVAVSRSNGELVWSTQI-------DPRPRSQITMSGSVYMGAFYVGL 135
+ V AV G+++W +I + S + + V G Y
Sbjct: 203 AFGAAIVGGDNGRVSAVLMQQGQMIWQQRISQATGPTEIDRLSDVDTTPVVVNGVVY--- 259
Query: 136 SSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYM 170
+ G+L LD+R+G+I+W+ +
Sbjct: 260 -----------ALAYNGNLTALDLRSGQIMWKREL 283
Score = 40.0 bits (92), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 64/139 (46%), Gaps = 13/139 (9%)
Query: 39 DISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG--LSGTGIVVNVTVAVV 96
D+ TP V NGVVY ++NG L A++ +G ++W++ L + + G I + V
Sbjct: 246 DVDTTPVVVNGVVYALAYNGNLTALDLRSGQIMWKRELGSVNDFIVDGDRIYLVDQNDRV 305
Query: 97 VAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSS--------LEEALPADQCC 148
+A++ G +W TQ D R + S +Y G VG S + A Q
Sbjct: 306 LALTTGGGVTLW-TQSDLLHR--LLTSPVLYNGDLVVGDSEGYLHWINVDDGRFVAQQKV 362
Query: 149 TFRGSLAKLDVRNGRIIWQ 167
G L + V +G+++ Q
Sbjct: 363 DSSGFLTEPTVADGKLLIQ 381
>gi|357384246|ref|YP_004898970.1| pyrrolo-quinoline quinone [Pelagibacterium halotolerans B2]
gi|351592883|gb|AEQ51220.1| pyrrolo-quinoline quinone [Pelagibacterium halotolerans B2]
Length = 565
Score = 45.8 bits (107), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 63/292 (21%), Positives = 108/292 (36%), Gaps = 57/292 (19%)
Query: 20 INPVTVRNLRLRWSFYAGK-DISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSK 78
IN V L+L W + TP + +GV+Y S G ++A++ G L+WE
Sbjct: 63 INTDNVDELQLAWGWAMEPGSQQTTPLIYDGVMYIASPGGIVHALDGATGDLLWEYRREM 122
Query: 79 LTGLSGTGIVVNVTV-----------AVVVAVSRSNGELVWSTQI-DPRPRSQITMSGSV 126
GI + + A +VA+ ++G++VW + + D +IT + V
Sbjct: 123 PEDFRPGGITRGLAIFEDKIYYGTPDASLVALDATSGQVVWESVVADHEGGKRITAAPVV 182
Query: 127 YMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGY----- 181
G +G D+C ++ D G W+ + D +
Sbjct: 183 ADGKVIIGFQGCSR-FSEDKC-----AVVAFDAETGEESWRFVTVEDAEVGEDSWGGTPY 236
Query: 182 ---SGAAVWGSSPAIDVIRRQKQNNQTTKPTHPDQCIS-------SDIYANSIVALDIDS 231
GA VW +S DV +QN + P +Y++S++AL ++
Sbjct: 237 VLRGGADVW-TSATYDV----EQNLILIGVSQPKPWARVSRGQDGPSLYSSSVLALRPEN 291
Query: 232 GRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTISTNGRF 283
G +AW + PG + DAD M++ I R+
Sbjct: 292 GELAWYR------------------QYVPGESTDADEAFEHMIIEIEGERRY 325
>gi|384411905|ref|YP_005621270.1| Pyrrolo-quinoline quinone [Zymomonas mobilis subsp. mobilis ATCC
10988]
gi|335932279|gb|AEH62819.1| Pyrrolo-quinoline quinone [Zymomonas mobilis subsp. mobilis ATCC
10988]
Length = 494
Score = 45.8 bits (107), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 63/134 (47%), Gaps = 20/134 (14%)
Query: 39 DISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG--LSGTGIVVNVTVAVV 96
DI+A P + +G VY G + AV+ F G +WE N+S + + G I V A +
Sbjct: 341 DINAFPVIDSGHVYAVGQGGRMVAVDLFMGQRLWELNISGFSTPWVVGQWIFVVTMDAKL 400
Query: 97 VAVSRSNGELVWSTQI----DPRPRS-QITMSGSVYMGAFYVGLSSLEEALPADQCCTFR 151
+A+ RSNG + W +++ +P ++ I +G V G + R
Sbjct: 401 LAIQRSNGHIRWMSELKAWANPSKKTGPINWNGPVLAGGRLI-------------LTNNR 447
Query: 152 GSLAKLDVRNGRII 165
G L ++D +G++I
Sbjct: 448 GELIEVDPADGQMI 461
>gi|448677332|ref|ZP_21688689.1| pyrrolo-quinoline quinone [Haloarcula argentinensis DSM 12282]
gi|445774222|gb|EMA25244.1| pyrrolo-quinoline quinone [Haloarcula argentinensis DSM 12282]
Length = 214
Score = 45.8 bits (107), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 58/129 (44%), Gaps = 13/129 (10%)
Query: 6 GDLNNRRYAYGEVLINPVTVRNLRLRWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNA 65
G L+ YA I+P T +WS+ + A P V +G VY S +G YA++A
Sbjct: 2 GSLDGHLYA-----IDPDTGEK---QWSYMTQNSVGAGPVVHDGTVYIGSSDGSFYALDA 53
Query: 66 FNGALIW----EQNLSKLTGLSGTGIVVNVTVAVVVAVSRSNGELVWSTQIDPRPRSQ-I 120
G +W E + + G + V + A++R +G L+WS + D S I
Sbjct: 54 TTGESLWDFPTEDQIWAGAPVDGERVFVGSGDGKLYALNRHDGSLLWSLETDLDINSTPI 113
Query: 121 TMSGSVYMG 129
+ +VY G
Sbjct: 114 VWNETVYFG 122
>gi|298247320|ref|ZP_06971125.1| serine/threonine protein kinase [Ktedonobacter racemifer DSM 44963]
gi|297549979|gb|EFH83845.1| serine/threonine protein kinase [Ktedonobacter racemifer DSM 44963]
Length = 778
Score = 45.8 bits (107), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 62/136 (45%), Gaps = 26/136 (19%)
Query: 43 TPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKL---TGLSGTGIVVNVTVAV---- 95
T AVANGVVY + +G L A+NA GA IW L+ T + IVVN T+ +
Sbjct: 473 TVAVANGVVYAAAVSGMLDALNARTGAQIWSIRLTDAVSDTYQNAAPIVVNGTLYLHTIN 532
Query: 96 --VVAVSRSNGELVWSTQID--PRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFR 151
V AV +G + WST +D PR+ + G YVG S
Sbjct: 533 GNVYAVDARSGTVRWSTHVDVPTNPRNGGASIPAEANGVVYVGGSQY------------- 579
Query: 152 GSLAKLDVRNGRIIWQ 167
L +VRNG ++W+
Sbjct: 580 --LYAFEVRNGAMLWR 593
Score = 37.7 bits (86), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 33/54 (61%), Gaps = 7/54 (12%)
Query: 39 DISATPAVANGVVYF-----PSWNG-YLYAVNAFNGALIWEQNLSKLTGLSGTG 86
I P+VANGV+Y P + G YL+AVNA GA +W ++ K TG++G G
Sbjct: 652 QIDYPPSVANGVLYLGTVADPVFGGGYLFAVNARTGATLWNASIDK-TGVAGEG 704
>gi|399544246|ref|YP_006557554.1| Quinoprotein ethanol dehydrogenase [Marinobacter sp. BSs20148]
gi|399159578|gb|AFP30141.1| Quinoprotein ethanol dehydrogenase [Marinobacter sp. BSs20148]
Length = 591
Score = 45.8 bits (107), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 74/351 (21%), Positives = 128/351 (36%), Gaps = 75/351 (21%)
Query: 2 LNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAGKDI----SATPAVANGVVYFPSWN 57
+++G +R++ E L N +R L+ W+F G + + P + +GV+Y +
Sbjct: 42 VSYGMGTQGQRFSTIEDL-NTENIRYLQPAWAFSFGSEKMRGQESQPMIKDGVMYVTASY 100
Query: 58 GYLYAVNAFNGALIWEQNLSKLTGLSGTGIVVNVTVAV-------------VVAVSRSNG 104
+YA++A G IW+ + G+ VVN VA+ +VA+++ G
Sbjct: 101 SRVYAIDARTGEEIWQYDARLPDGIMPCCDVVNRGVALYGDKVYFGTLDAKLVALNKDTG 160
Query: 105 ELVWSTQI-DPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGR 163
+ VW ++ D + IT + V G G+S E + G + D G
Sbjct: 161 KPVWIKKVADYQAGYAITAAPLVVKGKLITGVSGGEFGI--------VGKVEAYDPETGD 212
Query: 164 IIWQT--------YMLPDNGGKRGGYS----------------GAAVW---GSSPAIDVI 196
++W Y+ D G S GAA W P D +
Sbjct: 213 LVWTRPTVEGHMGYVYKDGKAIENGISGGEAGKTWPGDMWKNGGAATWLGGTYDPDTDSL 272
Query: 197 RRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNP 256
N P + ++++ S +A+D D G I W +F
Sbjct: 273 FFGTGN---PAPWNSHLRPGDNLFSASRLAIDPDDGSIKW----------HFQTT----- 314
Query: 257 DCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
P D D + NG+ ++GF + +R++GD I
Sbjct: 315 ---PHDGWDYDGVNELISFNYEENGKTVMAAATADRNGFFYVLNRENGDFI 362
>gi|255019353|ref|ZP_05291471.1| hypothetical protein ACA_0092 [Acidithiobacillus caldus ATCC 51756]
gi|254971206|gb|EET28650.1| hypothetical protein ACA_0092 [Acidithiobacillus caldus ATCC 51756]
Length = 485
Score = 45.8 bits (107), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 68/163 (41%), Gaps = 18/163 (11%)
Query: 20 INPVTVRNLRLRWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKL 79
I + + LRW + + TP NG + F + +G++YA+ A NG L+W+ ++
Sbjct: 202 IEAIDTNDGMLRWVYPTKGEDMPTPVFVNGKIIFGNGDGHVYALGAENGTLLWKTSIDSF 261
Query: 80 TGLS------GTGIVV--NVTVAVVVAVSRSNGELVWSTQIDPRPRSQITMSGS----VY 127
+S G IVV + + +S +G+++W PR + SG
Sbjct: 262 VSMSSATPADGGQIVVLGGTHPSAIYGISSVSGKILWKVY----PRGIYSSSGGDGTWAA 317
Query: 128 MGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYM 170
G VG + A A + L+ R+G ++W +
Sbjct: 318 QGNVVVGQIEIHRAAQAKGMSS--SEEIALNARSGHVLWSKVL 358
>gi|238753872|ref|ZP_04615232.1| hypothetical protein yruck0001_6440 [Yersinia ruckeri ATCC 29473]
gi|238707860|gb|EEQ00218.1| hypothetical protein yruck0001_6440 [Yersinia ruckeri ATCC 29473]
Length = 393
Score = 45.8 bits (107), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 64/155 (41%), Gaps = 30/155 (19%)
Query: 29 RLRWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLS----KLTGLSG 84
++ W + + P V++G+V + NG L A+N +GA+ W NL L G S
Sbjct: 141 KVAWQTTVAGEAMSRPVVSDGMVLVHTTNGMLQALNESDGAIKWTLNLDVPSLSLRGESS 200
Query: 85 TGIVVNVTVA-----VVVAVSRSNGELVWSTQI-------DPRPRSQITMSGSVYMGAFY 132
+ + V AV G+L+W +I + + + M+ V G Y
Sbjct: 201 PTVAFGAAIVGGDNGRVSAVMMQQGQLIWQQRISQVTGTTEIDRLNDVDMTPVVVDGVVY 260
Query: 133 VGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQ 167
+ G+L LD+R+G+I+W+
Sbjct: 261 --------------ALAYNGNLTALDLRSGQILWK 281
Score = 45.1 bits (105), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 51/228 (22%), Positives = 98/228 (42%), Gaps = 41/228 (17%)
Query: 27 NLRLRWSFYAGKD---ISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG-- 81
NL + +FY+ +S V+ V+ S +YA+NA +G + W+ ++
Sbjct: 96 NLSEKTNFYSSNRSAMLSGGLTVSGSHVFVGSEKAIVYALNADDGKVAWQTTVAGEAMSR 155
Query: 82 --LSGTGIVVNVTVAVVVAVSRSNGELVWSTQID-PRPRSQITMSGSVYMGAFYVGLSSL 138
+S ++V+ T ++ A++ S+G + W+ +D P + S +V GA VG +
Sbjct: 156 PVVSDGMVLVHTTNGMLQALNESDGAIKWTLNLDVPSLSLRGESSPTVAFGAAIVGGDN- 214
Query: 139 EEALPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYSGAAVWGSSPAIDVIRR 198
G ++ + ++ G++IWQ + G + ID
Sbjct: 215 -------------GRVSAVMMQQGQLIWQQRISQVTG--------------TTEID---- 243
Query: 199 QKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIF 246
+ N+ P D + + Y ++ ALD+ SG+I W + LG + F
Sbjct: 244 -RLNDVDMTPVVVDGVVYALAYNGNLTALDLRSGQILWKRELGSVNDF 290
>gi|117619948|ref|YP_856298.1| PQQ repeat-containing protein [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
gi|117561355|gb|ABK38303.1| PQQ enzyme repeat domain protein [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
Length = 385
Score = 45.8 bits (107), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 52/98 (53%), Gaps = 8/98 (8%)
Query: 39 DISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLS--KLTGLSGTGIVVNVTVAVV 96
D+ ATP +A +Y ++NG L A G +W++ S + ++G IV+ + + +
Sbjct: 238 DVDATPLIAGDELYAIAYNGQLMARKLMTGDEVWKRKYSGYRDMAVTGNAIVLTDSRSHL 297
Query: 97 VAVSRSNGELVWS-TQIDPRPRSQITMSGSVYMGAFYV 133
AV R NG +WS TQ++ R T++ V +G + V
Sbjct: 298 FAVDRRNGLELWSNTQLENR-----TVTAPVILGDYVV 330
>gi|417405877|gb|JAA49631.1| Putative pqq pyrrolo-quinoline quinone repeat protein [Desmodus
rotundus]
Length = 1105
Score = 45.8 bits (107), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 56/121 (46%), Gaps = 15/121 (12%)
Query: 27 NLRLRWSFYAGKDISATPAV-------ANGVVYFPSWNGYLYAVNAFNGALIWEQNL--- 76
LR+RW GK + A+P V ++ VY S + + A++ ++G + WEQ L
Sbjct: 761 ELRVRWRSDTGKCVDASPLVVIPAVDNSSATVYIGSHSHRMMAIDLYSGKVKWEQILGDR 820
Query: 77 ---SKLTGLSGTGIVVNVTVAVVVAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYV 133
S G IVV +V + +NGE+ W+ + +S TM + G F++
Sbjct: 821 IESSACVSKCGNFIVVGCYNGLVYVLKSNNGEIHWTFPTEDAVKSSPTMDPTT--GLFHL 878
Query: 134 G 134
G
Sbjct: 879 G 879
>gi|448243468|ref|YP_007407521.1| lipoprotein required for OM biogenesis, in BamABCDE complex
[Serratia marcescens WW4]
gi|445213832|gb|AGE19502.1| lipoprotein required for OM biogenesis, in BamABCDE complex
[Serratia marcescens WW4]
gi|453061740|gb|EMF02737.1| outer membrane biogenesis protein BamB [Serratia marcescens VGH107]
Length = 393
Score = 45.8 bits (107), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 94/215 (43%), Gaps = 44/215 (20%)
Query: 40 ISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG-------LSGTGIVVNVT 92
+S VA VY S +YA+N +GA+ W+ +K+ G +S ++V+ +
Sbjct: 112 LSGGLTVAGDKVYVGSEKAVVYALNTADGAIAWQ---TKVAGEAISRPVVSDGMVLVHTS 168
Query: 93 VAVVVAVSRSNGELVWSTQID-PRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFR 151
++ A++ ++G + W+ +D P + + +V GA VG +
Sbjct: 169 NGMLQALNEADGAVKWTVNLDMPSLSLRGESAPAVAFGAAIVGGDN-------------- 214
Query: 152 GSLAKLDVRNGRIIWQTYMLPDNGGKRGGYSGAAVWGSSPAIDVIRRQKQNNQTTKPTHP 211
G ++ + ++ G+IIWQ + +G ID + N+ T P
Sbjct: 215 GRVSAVLMQQGQIIWQQRISQPSGATE--------------ID-----RLNDVDTTPVIV 255
Query: 212 DQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIF 246
D + + Y ++ ALD+ SG+I W + LG + F
Sbjct: 256 DGVVYALGYNGNLTALDLRSGQIIWKRELGSVNDF 290
Score = 42.7 bits (99), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 63/145 (43%), Gaps = 19/145 (13%)
Query: 36 AGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLS----KLTGLSGTGIVVNV 91
AG+ IS P V++G+V + NG L A+N +GA+ W NL L G S +
Sbjct: 149 AGEAIS-RPVVSDGMVLVHTSNGMLQALNEADGAVKWTVNLDMPSLSLRGESAPAVAFGA 207
Query: 92 TVA-----VVVAVSRSNGELVWSTQI-DPRPRSQITMSGSVYMGAFYVGLSSLEEALPAD 145
+ V AV G+++W +I P ++I V V
Sbjct: 208 AIVGGDNGRVSAVLMQQGQIIWQQRISQPSGATEIDRLNDVDTTPVIVD--------GVV 259
Query: 146 QCCTFRGSLAKLDVRNGRIIWQTYM 170
+ G+L LD+R+G+IIW+ +
Sbjct: 260 YALGYNGNLTALDLRSGQIIWKREL 284
>gi|328949588|ref|YP_004366923.1| serine/threonine protein kinase [Marinithermus hydrothermalis DSM
14884]
gi|328449912|gb|AEB10813.1| serine/threonine protein kinase [Marinithermus hydrothermalis DSM
14884]
Length = 615
Score = 45.8 bits (107), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 41/83 (49%), Gaps = 3/83 (3%)
Query: 32 WSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG---LSGTGIV 88
W++ ++ +PAV +G VY W+G LYA++ G +W L +LT L+ +
Sbjct: 502 WTYDVEGELWGSPAVGHGRVYVGGWSGVLYALDLRTGDEVWRAELGRLTASLSLAQNHLY 561
Query: 89 VNVTVAVVVAVSRSNGELVWSTQ 111
++A + GE+VW +
Sbjct: 562 AATEDGRLIAFRAATGEVVWQAE 584
Score = 40.0 bits (92), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 66/144 (45%), Gaps = 21/144 (14%)
Query: 30 LRWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTGL--SGTGI 87
+RW+F AG ++A P + G+++ S NG++YA++ G L ++ + + G+
Sbjct: 421 VRWAFEAGGHLTAGPTLYRGLLFIASENGWMYALDPPTGQLRYKVETGPIHAHLPAADGV 480
Query: 88 VVNVTVA-VVVAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQ 146
++ T A V E++W+ ++ ++ S +V G YVG
Sbjct: 481 LILPTWAGEVHGFDPLRREVLWTYDVE----GELWGSPAVGHGRVYVG------------ 524
Query: 147 CCTFRGSLAKLDVRNGRIIWQTYM 170
+ G L LD+R G +W+ +
Sbjct: 525 --GWSGVLYALDLRTGDEVWRAEL 546
>gi|148261773|ref|YP_001235900.1| Pyrrolo-quinoline quinone [Acidiphilium cryptum JF-5]
gi|326405269|ref|YP_004285351.1| PQQ-dependent dehydrogenase [Acidiphilium multivorum AIU301]
gi|338989018|ref|ZP_08633902.1| Pyrrolo-quinoline quinone [Acidiphilium sp. PM]
gi|146403454|gb|ABQ31981.1| Pyrrolo-quinoline quinone [Acidiphilium cryptum JF-5]
gi|325052131|dbj|BAJ82469.1| PQQ-dependent dehydrogenase [Acidiphilium multivorum AIU301]
gi|338206046|gb|EGO94298.1| Pyrrolo-quinoline quinone [Acidiphilium sp. PM]
Length = 615
Score = 45.8 bits (107), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 75/359 (20%), Positives = 144/359 (40%), Gaps = 83/359 (23%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAGKD--ISATPAVANGVVYFP-SWN 57
W+ G NN RY+ + IN V+NL++ W+ G D + P V ++Y+ S+
Sbjct: 52 WVMPTGTYNNWRYSTLD-QINSKNVKNLQVAWTMSTGTDRGLEGQPIVIGDMMYYETSYP 110
Query: 58 GYLYAVNAFN-GALIWEQNLSKLTGLS--------------GTGIV-VNVTVAVVVAVSR 101
Y+YAVN + + W+ + + G G++ V+ A + A++
Sbjct: 111 NYVYAVNLNHPDQIAWKYTPPRDSNAPPVACCDVVNRGPAYGDGMIFVDALDARLYALNA 170
Query: 102 SNGELVWSTQIDPRPRSQITMSGS--VYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDV 159
G++VWS + P+ TM+G+ V VG++ E + RG + ++
Sbjct: 171 KTGKVVWSAD-NGHPKDGQTMTGAPMVVGNNVIVGIAGGEYGV--------RGYITAYNI 221
Query: 160 RNGRIIWQTY-------MLPDNGGKRGGYSGAAV---------------------WG--- 188
G+++W+ Y L D G +G V WG
Sbjct: 222 HTGKMVWRGYSEGPSKDTLIDPATTINGATGKPVGPHSSIKTWKGDEWKVGGGTTWGWYS 281
Query: 189 SSPAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYF 248
P +++I N T P+ Q + ++ +I A + ++G++ W ++
Sbjct: 282 YDPKLNLIYYGSGNPGTWNPS---QRPGKNRWSMTIWARNPETGKVKW--------VYQM 330
Query: 249 TCLVPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
T P D D +L+ + +G+ +V ++GF++ +R++G I
Sbjct: 331 T----------PHDGWDYDGVNEMVLVNVKYHGKEVPALVHFDRNGFSYVMNRENGSPI 379
>gi|307945181|ref|ZP_07660517.1| methanol dehydrogenase subunit 1 [Roseibium sp. TrichSKD4]
gi|307771054|gb|EFO30279.1| methanol dehydrogenase subunit 1 [Roseibium sp. TrichSKD4]
Length = 599
Score = 45.4 bits (106), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 80/358 (22%), Positives = 136/358 (37%), Gaps = 83/358 (23%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAG--KDISATPAVANGVVY----FP 54
W+ GD N+RY+ E IN V ++++ W+F G + +P V V+Y FP
Sbjct: 34 WVIQTGDYKNQRYSKLE-QINKDNVGDMQVAWTFSTGVLRGHEGSPLVIGDVMYVHTPFP 92
Query: 55 SWNGYLYAVNAFN-GALIWEQNLSKLTGL---------------SGTGIVVNVTVAVVVA 98
+ +YA++ N G +IW+ + T + + I+++ VVA
Sbjct: 93 N---TVYALDLANEGKIIWKYEPKQDTNVIPVMCCDTVNRGVAYADGKILLHQADTKVVA 149
Query: 99 VSRSNGELVWST-QIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKL 157
+ G VWS DP T + VG+S E + RGS+
Sbjct: 150 LDAKTGAEVWSVVNGDPSIGETNTATVMPVGDKVIVGISGGEFGV--------RGSVTAY 201
Query: 158 DVRNGRIIWQTY-MLPDNG-------------------------GKRGGYSGAAVWG--S 189
++ +G W+ Y M PD+ G + G WG S
Sbjct: 202 NLADGSQAWRAYSMGPDSDILVDPEKTTHLGKPVGVDSGLNTWEGDQWKIGGGTTWGWYS 261
Query: 190 SPAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFT 249
A + + N +T +P Q + ++ +I+A D D+G W F
Sbjct: 262 YDAEENLIYYGTGNPST--WNPAQRPGDNRWSMTIMARDADTGMAKW-----------FY 308
Query: 250 CLVPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
+ P++ D D +L NG R ++ ++GF + DR SG+++
Sbjct: 309 QMTPHD-------EWDFDGINEMILTEQEVNGETRKLLTHFDRNGFGYTLDRVSGELL 359
>gi|448684709|ref|ZP_21692796.1| PQQ enzyme repeat domain protein [Haloarcula japonica DSM 6131]
gi|445782640|gb|EMA33481.1| PQQ enzyme repeat domain protein [Haloarcula japonica DSM 6131]
Length = 418
Score = 45.4 bits (106), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 63/144 (43%), Gaps = 9/144 (6%)
Query: 30 LRWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIW----EQNLSKLTGLSGT 85
++W++ A +P VANG VY S + LYA++A G W + + S
Sbjct: 68 IKWTYDADGPFWGSPVVANGTVYVGSTDNSLYAIDAQTGTEEWAFPAQHRIEATPAYSDG 127
Query: 86 GIVVNVTVAVVVAVSRSNGELVWSTQIDPRPRSQITM-SGSVYMGAFYVGLSSLEEALPA 144
+ V + AV ++G WS D R T+ GSV++G VG +L A A
Sbjct: 128 TVYVGSYDKHLYAVDATDGTEEWSRSFDGLVRGSPTVWDGSVFIG---VGCHNLACAWYA 184
Query: 145 DQC-CTFRGSLAKLDVRNGRIIWQ 167
D+ G + LD +G W+
Sbjct: 185 DETDVPENGWVYSLDAASGETNWR 208
>gi|84489025|ref|YP_447257.1| hypothetical protein Msp_0197 [Methanosphaera stadtmanae DSM 3091]
gi|84372344|gb|ABC56614.1| conserved hypothetical membrane-spanning protein [Methanosphaera
stadtmanae DSM 3091]
Length = 412
Score = 45.4 bits (106), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 72/165 (43%), Gaps = 28/165 (16%)
Query: 31 RWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIW----EQNLSKLTGLSGTG 86
W F +G I +TPA+ + +Y S +GY+YA+N +G+++W E ++ + G
Sbjct: 133 NWKFKSGDRIKSTPAIDSTKIYVGSDDGYVYALNRNDGSVVWQYKTEDSVESSPVVHGDT 192
Query: 87 IVVNVTVAVVVAVSRSNGELVWS-TQIDPRPRSQITMSGSVYM----------------- 128
+ + V A++ ++G + W+ T D S +G+VY+
Sbjct: 193 LYIGSNDDKVYALNINDGSVKWTYTTGDDVKSSPAISNGNVYIASEDNQVYALSEDTGLE 252
Query: 129 ------GAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQ 167
G+ S++E + T +G L LD+R+G W
Sbjct: 253 VWSYNTGSKVTSSPSIDERHSSLYIGTEQGDLYSLDLRDGLKKWD 297
Score = 42.7 bits (99), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 51/104 (49%), Gaps = 5/104 (4%)
Query: 32 WSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWE----QNLSKLTGLSGTGI 87
W + I+++P V+ VY S +GYLY+ NA G+ W+ + + T I
Sbjct: 94 WKYETEGAITSSPTVSGDTVYVGSEDGYLYSNNANTGSNNWKFKSGDRIKSTPAIDSTKI 153
Query: 88 VVNVTVAVVVAVSRSNGELVWSTQIDPRPRSQITMSG-SVYMGA 130
V V A++R++G +VW + + S + G ++Y+G+
Sbjct: 154 YVGSDDGYVYALNRNDGSVVWQYKTEDSVESSPVVHGDTLYIGS 197
Score = 41.6 bits (96), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 23 VTVRNLRLRWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNL-SKLT 80
+ + + ++W++ G D+ ++PA++NG VY S + +YA++ G +W N SK+T
Sbjct: 205 LNINDGSVKWTYTTGDDVKSSPAISNGNVYIASEDNQVYALSEDTGLEVWSYNTGSKVT 263
>gi|332162633|ref|YP_004299210.1| outer membrane protein assembly complex subunit YfgL [Yersinia
enterocolitica subsp. palearctica 105.5R(r)]
gi|325666863|gb|ADZ43507.1| outer membrane protein assembly complex subunit YfgL [Yersinia
enterocolitica subsp. palearctica 105.5R(r)]
gi|330859279|emb|CBX69629.1| lipoprotein yfgL [Yersinia enterocolitica W22703]
Length = 393
Score = 45.4 bits (106), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 66/161 (40%), Gaps = 36/161 (22%)
Query: 29 RLRWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLS----KLTGLSG 84
++ W + + P V++GVV + NG L A+N +GA+ W NL L G S
Sbjct: 141 QVAWHTVVAGEALSRPVVSDGVVLIHTSNGMLQALNESDGAIKWTLNLDTPALSLRGESA 200
Query: 85 TGIVVNVTVA-----VVVAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLE 139
+ + V AV G+L+W +I SQ+T G + ++
Sbjct: 201 PTVAFGAALVGGDNGRVSAVMLEQGQLIWQQRI-----SQVT------------GTTEID 243
Query: 140 EALPADQ----------CCTFRGSLAKLDVRNGRIIWQTYM 170
D + G+L LD+R+G+I+W+ M
Sbjct: 244 RLNDVDTTPVVVDGVVYALAYNGNLTALDLRSGQILWKREM 284
Score = 39.7 bits (91), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 84/197 (42%), Gaps = 40/197 (20%)
Query: 51 VYFPSWNGYLYAVNAFNGALIWE-----QNLSKLTGLSGTGIVVNVTVAVVVAVSRSNGE 105
VY S +YA+N+ +G + W + LS+ G ++++ + ++ A++ S+G
Sbjct: 123 VYVGSEKAVVYALNSDDGQVAWHTVVAGEALSRPVVSDGV-VLIHTSNGMLQALNESDGA 181
Query: 106 LVWSTQIDPRPRSQITMSG-SVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRI 164
+ W+ +D S S +V GA VG + G ++ + + G++
Sbjct: 182 IKWTLNLDTPALSLRGESAPTVAFGAALVGGDN--------------GRVSAVMLEQGQL 227
Query: 165 IWQTYMLPDNGGKRGGYSGAAVWGSSPAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSI 224
IWQ + G + ID + N+ T P D + + Y ++
Sbjct: 228 IWQQRISQVTG--------------TTEID-----RLNDVDTTPVVVDGVVYALAYNGNL 268
Query: 225 VALDIDSGRIAWAKPLG 241
ALD+ SG+I W + +G
Sbjct: 269 TALDLRSGQILWKREMG 285
>gi|240139319|ref|YP_002963794.1| XoxF [Methylobacterium extorquens AM1]
gi|240009291|gb|ACS40517.1| XoxF [Methylobacterium extorquens AM1]
Length = 599
Score = 45.4 bits (106), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 70/353 (19%), Positives = 135/353 (38%), Gaps = 85/353 (24%)
Query: 7 DLNNRRYAYGEVLINPVTVRNLRLRWSFYAG--KDISATPAVANGVVY----FPSWNGYL 60
D N RY+ + IN V+NL++ W+F G + +P V ++Y FP+ +
Sbjct: 40 DYANTRYSKLD-QINASNVKNLQVAWTFSTGVLRGHEGSPLVVGDIMYVHTPFPN---IV 95
Query: 61 YAVNAFNGA-LIWE---------------QNLSKLTGLSGTGIVVNVTVAVVVAVSRSNG 104
YA++ N + ++W+ +++ + I+++ +V++ G
Sbjct: 96 YALDLNNDSKILWKYEPKQDPSVIPVMCCDTVNRGLAYADGAIILHQADTTLVSLDAKTG 155
Query: 105 ELVWSTQI-DPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGR 163
++ WS + D + T + VG+S E + RG + D + G+
Sbjct: 156 KVNWSVKNGDSKVGETNTATVLPVKDKIIVGISGAEYGI--------RGHMTAYDAKTGK 207
Query: 164 IIWQTYML-PDNG-------------------------GKRGGYSGAAVWG---SSPAID 194
+W+ Y + PD+ G + G A WG P +D
Sbjct: 208 RVWRAYSVGPDDEMLVDPEKTTSLGKPIGKDSSLKTWEGDQWKTGGGATWGWYSYDPKLD 267
Query: 195 VIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPN 254
+ N T +P Q + + +I A + D+G+ W I+ T
Sbjct: 268 LFYYGTANPSTW---NPKQRPGDNKWTMAIFARNPDTGQAKW--------IYQMT----- 311
Query: 255 NPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
P D D +L +G+ R ++ ++GFA+ DR +G+++
Sbjct: 312 -----PHDEWDYDGINEMILTDQKVDGKERPLLTHFDRNGFAYTLDRANGEVL 359
>gi|123441421|ref|YP_001005408.1| outer membrane protein assembly complex subunit YfgL [Yersinia
enterocolitica subsp. enterocolitica 8081]
gi|122088382|emb|CAL11173.1| putative lipoprotein [Yersinia enterocolitica subsp. enterocolitica
8081]
Length = 393
Score = 45.4 bits (106), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 66/161 (40%), Gaps = 36/161 (22%)
Query: 29 RLRWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLS----KLTGLSG 84
++ W + + P V++GVV + NG L A+N +GA+ W NL L G S
Sbjct: 141 QVAWQTVVAGEALSRPVVSDGVVLIHTSNGMLQALNESDGAIKWTLNLDTPALSLRGESA 200
Query: 85 TGIVVNVTVA-----VVVAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLE 139
+ + V AV G+L+W +I SQ+T G + ++
Sbjct: 201 PTVAFGAALVGGDNGRVSAVMLEQGQLIWQQRI-----SQVT------------GTTEID 243
Query: 140 EALPADQ----------CCTFRGSLAKLDVRNGRIIWQTYM 170
D + G+L LD+R+G+I+W+ M
Sbjct: 244 RLNDVDTTPVVVDGVVYALAYNGNLTALDLRSGQILWRREM 284
Score = 40.0 bits (92), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 85/197 (43%), Gaps = 40/197 (20%)
Query: 51 VYFPSWNGYLYAVNAFNGALIWE-----QNLSKLTGLSGTGIVVNVTVAVVVAVSRSNGE 105
VY S +YA+N+ +G + W+ + LS+ G ++++ + ++ A++ S+G
Sbjct: 123 VYVGSEKAVVYALNSDDGQVAWQTVVAGEALSRPVVSDGV-VLIHTSNGMLQALNESDGA 181
Query: 106 LVWSTQIDPRPRSQITMSG-SVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRI 164
+ W+ +D S S +V GA VG + G ++ + + G++
Sbjct: 182 IKWTLNLDTPALSLRGESAPTVAFGAALVGGDN--------------GRVSAVMLEQGQL 227
Query: 165 IWQTYMLPDNGGKRGGYSGAAVWGSSPAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSI 224
IWQ + G + ID + N+ T P D + + Y ++
Sbjct: 228 IWQQRISQVTG--------------TTEID-----RLNDVDTTPVVVDGVVYALAYNGNL 268
Query: 225 VALDIDSGRIAWAKPLG 241
ALD+ SG+I W + +G
Sbjct: 269 TALDLRSGQILWRREMG 285
>gi|402701096|ref|ZP_10849075.1| quinoprotein glucose dehydrogenase [Pseudomonas fragi A22]
Length = 663
Score = 45.4 bits (106), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 66/158 (41%), Gaps = 21/158 (13%)
Query: 152 GSLAKLDVRNGRIIWQTYMLPDNGGKRGGYSGAAVWGSSPAIDVIRRQKQNNQTTKPTHP 211
GSL L+ R G + W+ +PD+ + G A +W + + + P +
Sbjct: 249 GSLFALNARTGELEWEFKPIPDD--EAGNTGTANIWTAMSYDAALGLLYIPVSSPSPNYW 306
Query: 212 DQCISSDI-YANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGE 270
I S ALDI++G++ W++ +D++ D D
Sbjct: 307 GGNRPKAIPLGTSTTALDINTGKVVWSRQWVHHDLW------------------DYDINS 348
Query: 271 APMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDIIW 308
AP L+ I+ +G+ +V K GF + DR +G+ +W
Sbjct: 349 APTLMDITVDGKPVAALVQATKMGFLFTVDRRTGEDVW 386
>gi|433135722|ref|ZP_20321063.1| lipoprotein yfgL [Escherichia coli KTE166]
gi|431655650|gb|ELJ22681.1| lipoprotein yfgL [Escherichia coli KTE166]
Length = 392
Score = 45.4 bits (106), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 93/226 (41%), Gaps = 24/226 (10%)
Query: 44 PAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG--------------LSGTGIVV 89
PA+A+ VVY G + A+NA +G IW +L++ G +SG + +
Sbjct: 65 PALADNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVSGGHVYI 124
Query: 90 NVTVAVVVAVSRSNGELVWSTQIDPRPRSQ-ITMSGSVYMGAFYVGLSSLEEALPADQCC 148
A V A++ S+G + W T++ S+ + G V + L +L EA A +
Sbjct: 125 GSEKAQVYALNTSDGTVAWQTKVAGEALSRPVVSDGLVLIHTSNGQLQALNEADGAVK-W 183
Query: 149 TFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYS------GAAVWGS--SPAIDVIRRQK 200
T + L +R + GG G S G +W S A +
Sbjct: 184 TVNLDMPSLSLRGESAPATAFGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDR 243
Query: 201 QNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIF 246
++ T P + + + Y ++ ALD+ G+I W + LG + F
Sbjct: 244 LSDVDTTPVVVNGVVFALAYNGNLTALDLRRGQIMWKRELGSVNDF 289
Score = 41.6 bits (96), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 62/157 (39%), Gaps = 34/157 (21%)
Query: 32 WSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLS----KLTGLSGTGI 87
W + + P V++G+V + NG L A+N +GA+ W NL L G S
Sbjct: 143 WQTKVAGEALSRPVVSDGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPAT 202
Query: 88 VVNVTVA-----VVVAVSRSNGELVW---------STQIDPRPRSQITMSGSVYMGAFYV 133
V V AV G+++W ST+ID S + + V G +
Sbjct: 203 AFGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEID--RLSDVDTTPVVVNGVVF- 259
Query: 134 GLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYM 170
+ G+L LD+R G+I+W+ +
Sbjct: 260 -------------ALAYNGNLTALDLRRGQIMWKREL 283
>gi|448357926|ref|ZP_21546621.1| pyrrolo-quinoline quinone [Natrialba chahannaoensis JCM 10990]
gi|445648234|gb|ELZ01196.1| pyrrolo-quinoline quinone [Natrialba chahannaoensis JCM 10990]
Length = 431
Score = 45.4 bits (106), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 31/41 (75%)
Query: 32 WSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIW 72
W+F G+ ++A+P VA+ VVY S +G+LYA++A +G L+W
Sbjct: 163 WTFDTGEGVAASPTVADSVVYIGSNDGHLYALDATDGDLLW 203
Score = 38.5 bits (88), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 46/95 (48%), Gaps = 7/95 (7%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAGKDISATPAVANGVVYFPSWNGYL 60
W + D N +A G + P ++ + W F + ++PAV +G VY S +G L
Sbjct: 53 WESFQYDATNTGHAPG---VGPTA--DVEMLWDFPTDDSVYSSPAVVDGTVYVASMDGSL 107
Query: 61 YAVNAFNGALIWEQNLSKLTGLSGTGIVVNVTVAV 95
YA+ A +G W + + ++ + VV+ TV V
Sbjct: 108 YAIGADDGDERW--SFATDDSITSSPAVVDGTVYV 140
Score = 38.1 bits (87), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 27/49 (55%)
Query: 30 LRWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSK 78
L W+F A + I PAVA+G VYF S + LYAV+ A W + +
Sbjct: 201 LLWAFPAEESIMRAPAVADGTVYFGSTDYSLYAVDIDTAADQWREGADE 249
>gi|374855163|dbj|BAL58027.1| protein kinase [uncultured Chloroflexi bacterium]
Length = 697
Score = 45.4 bits (106), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 52/104 (50%), Gaps = 5/104 (4%)
Query: 32 WSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWE----QNLSKLTGLSGTGI 87
W F + ++P V +G+VY S + +LYA++ NG L W+ + ++ I
Sbjct: 584 WRFRTNNAVISSPVVFDGIVYVGSTDRHLYAIDVKNGRLYWKFEAGGQVVSTPAVTEEAI 643
Query: 88 VVNVTVAVVVAVSRSNGELVWSTQID-PRPRSQITMSGSVYMGA 130
+ V+++SR + ++ W + + P S + +G VY+G+
Sbjct: 644 YFGTSAGEVISLSRKDKKIRWKFKTNGPVTSSPLVYNGVVYIGS 687
Score = 38.9 bits (89), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 61/143 (42%), Gaps = 22/143 (15%)
Query: 29 RLRWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWE----QNLSKLTGLSG 84
R+ W + + ++P + + +VY S +G+L+AV+ GA W+ +N++ L
Sbjct: 501 RVIWRYETMGPVRSSPTLGDELVYVGSEDGHLHAVDLSTGAARWKFRANRNITSSPTLYQ 560
Query: 85 TGIVVNVTVAVVVAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPA 144
I+V + V + G W R + + S V+ G YVG +
Sbjct: 561 DLIIVGSSDWNVYGIEAKTGYPAWRF----RTNNAVISSPVVFDGIVYVGSTDRH----- 611
Query: 145 DQCCTFRGSLAKLDVRNGRIIWQ 167
L +DV+NGR+ W+
Sbjct: 612 ---------LYAIDVKNGRLYWK 625
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.319 0.137 0.440
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,865,316,301
Number of Sequences: 23463169
Number of extensions: 369804590
Number of successful extensions: 786607
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 577
Number of HSP's successfully gapped in prelim test: 2165
Number of HSP's that attempted gapping in prelim test: 770385
Number of HSP's gapped (non-prelim): 12787
length of query: 417
length of database: 8,064,228,071
effective HSP length: 145
effective length of query: 272
effective length of database: 8,957,035,862
effective search space: 2436313754464
effective search space used: 2436313754464
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 78 (34.7 bits)