Query 039692
Match_columns 417
No_of_seqs 186 out of 1958
Neff 8.7
Searched_HMMs 29240
Date Mon Mar 25 21:18:02 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/039692.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/039692hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1w6s_A Methanol dehydrogenase 100.0 2.8E-41 9.7E-46 351.2 42.6 363 1-392 14-533 (599)
2 1flg_A Protein (quinoprotein e 100.0 4.2E-41 1.4E-45 350.0 40.8 385 1-416 18-579 (582)
3 2ad6_A Methanol dehydrogenase 100.0 4.9E-40 1.7E-44 341.5 41.2 361 1-392 14-524 (571)
4 1yiq_A Quinohemoprotein alcoho 100.0 8.9E-40 3E-44 346.8 38.8 381 1-416 22-567 (689)
5 1kv9_A Type II quinohemoprotei 100.0 1.3E-39 4.5E-44 344.5 38.9 381 1-416 18-550 (668)
6 1kb0_A Quinohemoprotein alcoho 100.0 6.3E-39 2.1E-43 339.6 39.9 381 1-416 29-565 (677)
7 3q7m_A Lipoprotein YFGL, BAMB; 100.0 1.7E-33 5.7E-38 276.7 34.4 313 3-393 6-367 (376)
8 3q7m_A Lipoprotein YFGL, BAMB; 100.0 2.1E-29 7.3E-34 247.3 29.7 284 19-372 64-369 (376)
9 1w6s_A Methanol dehydrogenase 99.9 6.6E-26 2.3E-30 235.6 28.4 338 19-375 74-539 (599)
10 1flg_A Protein (quinoprotein e 99.9 1.6E-25 5.5E-30 232.7 29.9 325 20-375 80-552 (582)
11 2ad6_A Methanol dehydrogenase 99.9 2.3E-25 7.8E-30 231.2 30.8 323 19-374 74-529 (571)
12 1yiq_A Quinohemoprotein alcoho 99.9 2.3E-24 8E-29 228.4 30.0 328 19-375 81-541 (689)
13 1kb0_A Quinohemoprotein alcoho 99.9 3.1E-24 1.1E-28 227.0 30.8 326 19-373 88-541 (677)
14 1kv9_A Type II quinohemoprotei 99.9 3.7E-23 1.3E-27 218.5 28.6 328 19-374 77-523 (668)
15 2hz6_A Endoplasmic reticulum t 99.9 3.2E-26 1.1E-30 225.2 -3.4 245 41-373 2-271 (369)
16 3hxj_A Pyrrolo-quinoline quino 99.9 5.6E-22 1.9E-26 189.7 17.5 279 23-395 4-315 (330)
17 2hz6_A Endoplasmic reticulum t 99.8 2.5E-22 8.4E-27 197.5 1.9 235 19-340 20-271 (369)
18 3hxj_A Pyrrolo-quinoline quino 99.8 1.8E-18 6.1E-23 165.2 21.6 258 19-373 41-316 (330)
19 2be1_A Serine/threonine-protei 99.7 1.3E-18 4.4E-23 167.5 6.2 211 47-312 9-241 (339)
20 3no2_A Uncharacterized protein 99.7 1.6E-15 5.6E-20 142.7 25.5 229 49-349 6-262 (276)
21 3no2_A Uncharacterized protein 99.7 5.1E-16 1.7E-20 146.2 16.8 223 19-313 16-262 (276)
22 2be1_A Serine/threonine-protei 99.7 5.9E-16 2E-20 148.9 12.8 187 16-241 18-242 (339)
23 3vgz_A Uncharacterized protein 99.2 2.7E-08 9.3E-13 94.7 27.9 240 29-340 32-294 (353)
24 3vgz_A Uncharacterized protein 99.1 2.7E-08 9.2E-13 94.8 23.6 243 20-339 71-335 (353)
25 3dsm_A Uncharacterized protein 99.0 5E-08 1.7E-12 93.4 22.9 228 20-313 66-311 (328)
26 3dsm_A Uncharacterized protein 99.0 2.2E-07 7.6E-12 88.8 25.3 224 44-336 49-285 (328)
27 3hx6_A Type 4 fimbrial biogene 98.6 2.2E-06 7.4E-11 86.5 19.0 171 220-414 162-371 (570)
28 1pby_B Quinohemoprotein amine 98.6 3.2E-05 1.1E-09 72.4 25.7 131 20-170 13-172 (337)
29 3hx6_A Type 4 fimbrial biogene 98.5 5.7E-07 2E-11 90.7 13.3 188 49-306 86-287 (570)
30 1l0q_A Surface layer protein; 98.5 1.2E-05 4.1E-10 77.6 22.5 217 20-313 14-243 (391)
31 1l0q_A Surface layer protein; 98.5 4.5E-05 1.5E-09 73.5 25.3 187 50-312 3-198 (391)
32 2ovr_B FBW7, F-BOX/WD repeat p 98.5 2.5E-05 8.6E-10 77.1 23.4 222 45-348 166-391 (445)
33 2ovr_B FBW7, F-BOX/WD repeat p 98.5 5.1E-05 1.7E-09 74.9 25.4 214 21-311 182-399 (445)
34 1pby_B Quinohemoprotein amine 98.4 3.3E-05 1.1E-09 72.3 21.8 158 49-242 2-174 (337)
35 3bws_A Protein LP49; two-domai 98.3 0.00013 4.3E-09 71.4 24.2 213 48-338 133-365 (433)
36 3nol_A Glutamine cyclotransfer 98.3 0.00011 3.8E-09 67.4 20.1 171 95-339 66-246 (262)
37 3nok_A Glutaminyl cyclase; bet 98.2 3E-05 1E-09 71.4 15.5 140 126-337 103-254 (268)
38 1p22_A F-BOX/WD-repeat protein 98.2 0.0004 1.4E-08 68.3 24.1 219 47-347 142-364 (435)
39 1jmx_B Amine dehydrogenase; ox 98.2 0.00018 6.1E-09 67.7 20.6 161 48-241 10-185 (349)
40 3bws_A Protein LP49; two-domai 98.2 0.00021 7.1E-09 69.8 21.5 227 48-347 180-431 (433)
41 3mbr_X Glutamine cyclotransfer 98.1 0.00014 4.8E-09 66.1 17.8 143 126-339 72-225 (243)
42 3ow8_A WD repeat-containing pr 98.1 0.0018 6.1E-08 61.1 25.9 220 48-347 48-278 (321)
43 1p22_A F-BOX/WD-repeat protein 98.1 0.00018 6.2E-09 70.8 19.4 219 47-348 182-414 (435)
44 2iwa_A Glutamine cyclotransfer 98.1 0.00035 1.2E-08 64.6 19.5 204 27-340 8-228 (266)
45 3nok_A Glutaminyl cyclase; bet 98.1 0.0001 3.5E-09 67.7 15.7 153 42-241 58-220 (268)
46 3ow8_A WD repeat-containing pr 98.1 0.002 6.8E-08 60.7 25.5 218 49-346 93-319 (321)
47 3v7d_B Cell division control p 98.0 0.0015 5.1E-08 64.4 25.0 218 20-312 144-390 (464)
48 1jmx_B Amine dehydrogenase; ox 98.0 0.00048 1.6E-08 64.7 20.3 131 20-170 23-184 (349)
49 2iwa_A Glutamine cyclotransfer 98.0 0.00098 3.3E-08 61.5 21.1 104 94-241 86-191 (266)
50 1gxr_A ESG1, transducin-like e 98.0 0.0018 6.1E-08 60.2 23.4 217 48-346 109-335 (337)
51 4ery_A WD repeat-containing pr 98.0 0.0056 1.9E-07 56.7 26.4 192 48-312 35-232 (312)
52 3v7d_B Cell division control p 98.0 0.0014 4.8E-08 64.6 23.3 215 49-345 218-459 (464)
53 3mbr_X Glutamine cyclotransfer 98.0 0.00023 7.9E-09 64.7 15.8 168 29-242 10-190 (243)
54 1gxr_A ESG1, transducin-like e 98.0 0.0033 1.1E-07 58.3 24.3 216 50-347 65-295 (337)
55 3nol_A Glutamine cyclotransfer 97.9 0.00021 7.3E-09 65.6 14.9 154 41-241 45-211 (262)
56 4gqb_B Methylosome protein 50; 97.9 0.00092 3.2E-08 63.9 19.2 226 48-348 93-331 (344)
57 3vl1_A 26S proteasome regulato 97.9 0.0052 1.8E-07 59.3 24.8 242 48-349 109-366 (420)
58 1r5m_A SIR4-interacting protei 97.9 0.001 3.4E-08 64.1 19.4 183 48-305 161-363 (425)
59 3zwl_B Eukaryotic translation 97.8 0.0044 1.5E-07 58.2 23.3 228 48-339 44-281 (369)
60 2zux_A YESW protein; beta-prop 97.8 0.0021 7E-08 64.7 21.2 217 95-348 152-409 (591)
61 4ery_A WD repeat-containing pr 97.8 0.005 1.7E-07 57.1 23.1 193 48-311 77-276 (312)
62 3vl1_A 26S proteasome regulato 97.8 0.0017 5.8E-08 62.8 20.5 214 48-312 68-287 (420)
63 3u4y_A Uncharacterized protein 97.8 0.0056 1.9E-07 57.1 23.1 254 20-348 22-304 (331)
64 1r5m_A SIR4-interacting protei 97.8 0.0028 9.5E-08 60.9 21.5 221 48-347 120-360 (425)
65 1nir_A Nitrite reductase; hemo 97.8 0.01 3.4E-07 60.5 26.2 244 20-336 161-439 (543)
66 1q7f_A NHL, brain tumor CG1071 97.8 0.0074 2.5E-07 55.2 22.9 221 48-348 40-280 (286)
67 4aez_A CDC20, WD repeat-contai 97.8 0.012 4E-07 56.9 25.5 190 48-312 103-302 (401)
68 2zux_A YESW protein; beta-prop 97.7 0.0045 1.5E-07 62.2 21.8 94 20-114 153-314 (591)
69 3fvz_A Peptidyl-glycine alpha- 97.7 0.0045 1.5E-07 58.4 21.2 221 59-340 70-313 (329)
70 1nir_A Nitrite reductase; hemo 97.7 0.0023 7.7E-08 65.4 20.0 109 48-170 148-266 (543)
71 1got_B GT-beta; complex (GTP-b 97.7 0.025 8.5E-07 53.3 25.7 225 49-347 68-300 (340)
72 3c75_H MADH, methylamine dehyd 97.7 0.0044 1.5E-07 61.2 20.4 128 20-168 101-255 (426)
73 3zwl_B Eukaryotic translation 97.6 0.014 4.8E-07 54.6 23.3 221 48-348 86-346 (369)
74 3u4y_A Uncharacterized protein 97.6 0.006 2E-07 56.8 20.5 106 48-170 9-126 (331)
75 2mad_H Methylamine dehydrogena 97.6 0.0083 2.8E-07 58.1 21.7 226 20-309 99-356 (373)
76 4aez_A CDC20, WD repeat-contai 97.6 0.029 1E-06 54.0 25.8 225 48-348 146-380 (401)
77 3sjl_D Methylamine dehydrogena 97.6 0.0053 1.8E-07 59.7 20.1 125 20-165 61-213 (386)
78 4g56_B MGC81050 protein; prote 97.6 0.0014 4.7E-08 62.8 15.8 226 48-349 105-344 (357)
79 2mad_H Methylamine dehydrogena 97.6 0.022 7.6E-07 55.0 24.0 127 20-169 49-203 (373)
80 3c75_H MADH, methylamine dehyd 97.6 0.0041 1.4E-07 61.4 18.8 111 46-170 82-218 (426)
81 1got_B GT-beta; complex (GTP-b 97.6 0.046 1.6E-06 51.4 25.6 191 48-311 109-309 (340)
82 2zuy_A YESX protein; beta-prop 97.5 0.012 4E-07 59.5 21.7 216 95-348 156-413 (620)
83 3mkq_A Coatomer beta'-subunit; 97.5 0.042 1.4E-06 57.9 27.4 225 48-347 67-301 (814)
84 4a11_B DNA excision repair pro 97.5 0.012 4.2E-07 56.0 20.8 267 49-373 57-357 (408)
85 2zuy_A YESX protein; beta-prop 97.5 0.02 6.7E-07 57.9 22.0 93 20-113 157-317 (620)
86 3sjl_D Methylamine dehydrogena 97.5 0.009 3.1E-07 58.1 19.3 235 20-313 111-373 (386)
87 1qks_A Cytochrome CD1 nitrite 97.5 0.013 4.4E-07 60.1 21.5 108 48-171 166-285 (567)
88 1vyh_C Platelet-activating fac 97.5 0.029 1E-06 54.5 23.3 241 48-347 120-368 (410)
89 2ynn_A Coatomer subunit beta'; 97.4 0.029 9.9E-07 51.9 22.0 226 48-347 25-258 (304)
90 1qks_A Cytochrome CD1 nitrite 97.4 0.05 1.7E-06 55.7 25.1 89 20-113 179-285 (567)
91 1erj_A Transcriptional repress 97.4 0.022 7.5E-07 55.0 21.0 191 48-306 75-290 (393)
92 3mkq_A Coatomer beta'-subunit; 97.3 0.027 9.4E-07 59.4 23.0 195 48-312 25-226 (814)
93 1sq9_A Antiviral protein SKI8; 97.3 0.051 1.7E-06 51.7 22.9 69 214-312 199-276 (397)
94 3odt_A Protein DOA1; ubiquitin 97.2 0.028 9.7E-07 51.3 19.1 187 46-312 112-305 (313)
95 1sq9_A Antiviral protein SKI8; 97.2 0.034 1.2E-06 52.9 20.4 203 49-311 82-330 (397)
96 3lrv_A PRE-mRNA-splicing facto 97.2 0.047 1.6E-06 51.3 20.4 191 46-309 46-250 (343)
97 2pbi_B Guanine nucleotide-bind 97.1 0.14 4.8E-06 48.4 23.6 147 94-310 176-322 (354)
98 3sfz_A APAF-1, apoptotic pepti 97.1 0.017 5.8E-07 64.4 19.3 186 48-310 973-1165(1249)
99 3g4e_A Regucalcin; six bladed 97.0 0.11 3.6E-06 48.0 21.1 118 39-164 13-141 (297)
100 1q7f_A NHL, brain tumor CG1071 97.0 0.035 1.2E-06 50.5 17.5 102 48-169 88-201 (286)
101 4a11_B DNA excision repair pro 96.9 0.047 1.6E-06 51.8 18.3 236 50-349 114-366 (408)
102 4g56_B MGC81050 protein; prote 96.9 0.02 6.7E-07 54.6 15.5 108 151-312 160-267 (357)
103 2z2n_A Virginiamycin B lyase; 96.9 0.21 7.3E-06 45.0 24.1 97 48-165 25-132 (299)
104 3sfz_A APAF-1, apoptotic pepti 96.9 0.21 7.3E-06 55.4 25.7 233 48-346 669-911 (1249)
105 3odt_A Protein DOA1; ubiquitin 96.9 0.25 8.5E-06 44.8 24.9 188 46-312 27-223 (313)
106 2ynn_A Coatomer subunit beta'; 96.9 0.094 3.2E-06 48.4 19.2 149 92-312 33-181 (304)
107 1erj_A Transcriptional repress 96.9 0.19 6.3E-06 48.3 21.9 205 49-311 136-349 (393)
108 3mmy_A MRNA export factor; mRN 96.8 0.3 1E-05 45.2 22.9 184 49-304 55-248 (368)
109 1k8k_C P40, ARP2/3 complex 41 96.8 0.2 6.8E-06 46.8 21.4 226 48-348 20-274 (372)
110 3k26_A Polycomb protein EED; W 96.8 0.045 1.5E-06 51.1 16.7 107 48-169 34-155 (366)
111 3v9f_A Two-component system se 96.8 0.31 1.1E-05 51.5 24.7 193 48-310 268-485 (781)
112 2aq5_A Coronin-1A; WD40 repeat 96.8 0.068 2.3E-06 51.3 18.0 106 48-169 94-215 (402)
113 4gqb_B Methylosome protein 50; 96.7 0.03 1E-06 53.2 15.1 144 49-235 140-293 (344)
114 1vyh_C Platelet-activating fac 96.7 0.2 6.7E-06 48.5 20.6 205 48-311 162-377 (410)
115 3k26_A Polycomb protein EED; W 96.6 0.13 4.6E-06 47.7 18.6 103 50-168 87-199 (366)
116 2vdu_B TRNA (guanine-N(7)-)-me 96.6 0.094 3.2E-06 51.3 18.2 68 215-312 213-280 (450)
117 3fvz_A Peptidyl-glycine alpha- 96.6 0.4 1.4E-05 44.7 21.8 157 48-240 101-286 (329)
118 1pgu_A Actin interacting prote 96.6 0.12 4.2E-06 52.1 19.4 193 49-313 79-293 (615)
119 1yfq_A Cell cycle arrest prote 96.6 0.09 3.1E-06 48.7 16.9 96 48-161 23-131 (342)
120 3v9f_A Two-component system se 96.6 0.16 5.6E-06 53.7 20.6 102 48-166 373-483 (781)
121 4aow_A Guanine nucleotide-bind 96.6 0.35 1.2E-05 44.4 20.8 138 151-348 194-337 (340)
122 3iz6_a 40S ribosomal protein R 96.5 0.6 2E-05 44.4 24.4 110 214-348 263-375 (380)
123 3e5z_A Putative gluconolactona 96.5 0.24 8.2E-06 45.2 19.0 55 286-349 230-285 (296)
124 3jrp_A Fusion protein of prote 96.5 0.087 3E-06 49.3 16.2 247 48-347 23-286 (379)
125 4gga_A P55CDC, cell division c 96.5 0.44 1.5E-05 45.9 21.6 96 48-163 116-220 (420)
126 4aow_A Guanine nucleotide-bind 96.4 0.075 2.6E-06 49.1 15.3 144 94-306 195-340 (340)
127 2qc5_A Streptogramin B lactona 96.4 0.5 1.7E-05 42.5 21.5 97 48-165 72-179 (300)
128 2qc5_A Streptogramin B lactona 96.4 0.53 1.8E-05 42.3 24.1 97 48-165 30-137 (300)
129 2pm9_A Protein WEB1, protein t 96.3 0.37 1.3E-05 45.8 20.1 27 215-241 181-207 (416)
130 3mmy_A MRNA export factor; mRN 96.3 0.39 1.3E-05 44.4 19.9 228 48-340 98-338 (368)
131 1pgu_A Actin interacting prote 96.3 0.49 1.7E-05 47.5 22.0 104 49-169 220-336 (615)
132 3vu4_A KMHSV2; beta-propeller 96.3 0.29 1E-05 46.2 18.8 188 49-305 71-273 (355)
133 3i2n_A WD repeat-containing pr 96.3 0.22 7.6E-06 46.1 17.6 108 49-170 81-208 (357)
134 1yfq_A Cell cycle arrest prote 96.2 0.23 7.9E-06 45.8 17.5 225 50-346 71-322 (342)
135 3elq_A Arylsulfate sulfotransf 96.2 0.093 3.2E-06 53.3 15.3 98 57-171 129-244 (571)
136 2oiz_A Aromatic amine dehydrog 96.2 0.26 8.9E-06 46.9 18.0 57 221-310 285-343 (361)
137 4a2l_A BT_4663, two-component 96.2 0.46 1.6E-05 50.3 21.6 103 48-164 320-439 (795)
138 3iz6_a 40S ribosomal protein R 96.1 0.62 2.1E-05 44.3 20.1 191 49-305 171-377 (380)
139 1pjx_A Dfpase, DIISOPROPYLFLUO 96.0 0.45 1.5E-05 43.4 18.0 56 286-347 238-296 (314)
140 2z2n_A Virginiamycin B lyase; 95.9 0.26 9E-06 44.4 16.0 97 48-165 109-216 (299)
141 4a2l_A BT_4663, two-component 95.9 0.75 2.6E-05 48.6 21.4 199 47-309 182-392 (795)
142 3i2n_A WD repeat-containing pr 95.9 0.22 7.7E-06 46.1 15.5 107 48-169 129-251 (357)
143 3hfq_A Uncharacterized protein 95.8 1.1 3.9E-05 41.4 24.5 100 50-165 4-122 (347)
144 2aq5_A Coronin-1A; WD40 repeat 95.8 1.3 4.5E-05 42.1 21.8 140 151-348 153-299 (402)
145 2oiz_A Aromatic amine dehydrog 95.8 1.3 4.5E-05 41.9 24.5 107 47-167 14-146 (361)
146 1rwi_B Serine/threonine-protei 95.8 0.87 3E-05 40.4 18.5 97 48-164 34-141 (270)
147 2p9w_A MAL S 1 allergenic prot 95.7 0.37 1.3E-05 45.5 16.1 110 39-163 13-169 (334)
148 3ei3_B DNA damage-binding prot 95.7 1.4 4.7E-05 41.5 24.5 187 49-311 87-290 (383)
149 3dm0_A Maltose-binding peripla 95.6 1.3 4.6E-05 45.7 21.9 195 49-312 396-601 (694)
150 3gre_A Serine/threonine-protei 95.5 0.53 1.8E-05 45.3 17.1 216 48-312 123-368 (437)
151 1rwi_B Serine/threonine-protei 95.5 0.34 1.2E-05 43.2 14.6 98 48-164 77-183 (270)
152 4gga_A P55CDC, cell division c 95.5 1.9 6.5E-05 41.3 24.1 225 48-347 159-394 (420)
153 2fp8_A Strictosidine synthase; 95.4 1.7 5.7E-05 40.2 20.4 46 293-340 259-304 (322)
154 1mda_H Methylamine dehydrogena 95.3 0.76 2.6E-05 44.1 17.3 68 46-113 29-115 (368)
155 2pm9_A Protein WEB1, protein t 95.3 0.39 1.3E-05 45.6 15.2 186 48-306 126-340 (416)
156 2pbi_B Guanine nucleotide-bind 95.3 0.83 2.8E-05 43.0 17.3 149 49-239 167-323 (354)
157 2ecf_A Dipeptidyl peptidase IV 95.3 1.7 5.9E-05 45.0 21.1 26 50-75 50-81 (741)
158 3pe7_A Oligogalacturonate lyas 95.2 1.7 5.9E-05 40.7 19.3 29 48-76 92-120 (388)
159 1k8k_C P40, ARP2/3 complex 41 95.1 1.1 3.7E-05 41.6 17.5 62 93-170 29-92 (372)
160 4ggc_A P55CDC, cell division c 95.1 1.8 6.3E-05 38.9 23.6 64 48-112 36-107 (318)
161 3hfq_A Uncharacterized protein 95.0 2 6.7E-05 39.8 18.9 57 95-165 19-76 (347)
162 4e54_B DNA damage-binding prot 94.9 1.6 5.5E-05 42.1 18.7 103 49-169 133-247 (435)
163 2z3z_A Dipeptidyl aminopeptida 94.9 2 6.8E-05 44.3 20.4 53 94-165 101-159 (706)
164 1fwx_A Nitrous oxide reductase 94.9 0.77 2.6E-05 46.8 16.3 90 47-139 100-217 (595)
165 4asc_A Kelch repeat and BTB do 94.9 2.3 7.9E-05 39.1 24.1 108 49-169 5-132 (315)
166 2dg1_A DRP35, lactonase; beta 94.9 2.3 8E-05 39.0 20.0 112 42-165 48-175 (333)
167 2ymu_A WD-40 repeat protein; u 94.8 3.5 0.00012 40.9 21.9 211 49-344 357-576 (577)
168 3f3f_A Nucleoporin SEH1; struc 94.8 2.3 7.8E-05 38.5 21.9 109 48-170 23-152 (351)
169 3frx_A Guanine nucleotide-bind 94.7 2.6 8.9E-05 38.7 21.6 194 49-312 31-236 (319)
170 3lrv_A PRE-mRNA-splicing facto 94.6 1 3.4E-05 42.0 15.8 100 49-165 95-205 (343)
171 3jrp_A Fusion protein of prote 94.6 0.67 2.3E-05 43.1 14.4 108 48-169 69-199 (379)
172 2vdu_B TRNA (guanine-N(7)-)-me 94.6 2.1 7.2E-05 41.4 18.5 146 50-240 116-280 (450)
173 3e5z_A Putative gluconolactona 94.5 2.6 8.8E-05 38.0 21.2 26 48-73 79-105 (296)
174 3gre_A Serine/threonine-protei 94.4 2 6.9E-05 41.1 17.7 111 151-312 191-301 (437)
175 3pe7_A Oligogalacturonate lyas 94.3 3.4 0.00012 38.6 23.0 70 44-113 41-121 (388)
176 3elq_A Arylsulfate sulfotransf 94.1 0.26 9E-06 50.0 10.8 106 59-171 176-302 (571)
177 3vu4_A KMHSV2; beta-propeller 94.0 3.9 0.00013 38.2 21.5 225 48-349 30-272 (355)
178 4asc_A Kelch repeat and BTB do 93.9 3.8 0.00013 37.6 21.0 69 94-168 13-81 (315)
179 3jro_A Fusion protein of prote 93.9 1 3.4E-05 47.4 15.5 63 285-347 220-284 (753)
180 2ghs_A AGR_C_1268P; regucalcin 93.7 4.3 0.00015 37.5 22.5 112 40-165 50-172 (326)
181 4ggc_A P55CDC, cell division c 93.6 3.8 0.00013 36.7 21.4 30 48-77 79-108 (318)
182 3dm0_A Maltose-binding peripla 93.4 4 0.00014 42.0 18.9 190 48-312 442-641 (694)
183 2hqs_A Protein TOLB; TOLB, PAL 93.3 2 6.8E-05 41.5 15.5 100 49-164 191-303 (415)
184 2ymu_A WD-40 repeat protein; u 93.2 7.1 0.00024 38.6 22.6 56 285-346 480-537 (577)
185 3hrp_A Uncharacterized protein 93.0 3 0.0001 40.3 16.2 56 285-340 231-289 (409)
186 1ri6_A Putative isomerase YBHE 93.0 5 0.00017 36.3 22.0 63 285-347 190-261 (343)
187 2oaj_A Protein SNI1; WD40 repe 93.0 3.1 0.00011 44.7 17.7 209 48-309 29-248 (902)
188 4h5i_A Guanine nucleotide-exch 92.9 5.9 0.0002 37.2 17.9 60 215-303 284-343 (365)
189 3dwl_C Actin-related protein 2 92.9 0.31 1E-05 45.8 8.6 58 285-347 218-280 (377)
190 1nr0_A Actin interacting prote 92.8 7.4 0.00025 39.4 19.6 218 50-346 162-395 (611)
191 2p4o_A Hypothetical protein; p 92.7 5.9 0.0002 36.2 23.6 118 27-166 21-153 (306)
192 3frx_A Guanine nucleotide-bind 92.6 6 0.00021 36.1 22.6 224 49-347 78-316 (319)
193 4h5i_A Guanine nucleotide-exch 92.4 2.4 8.2E-05 40.0 14.2 65 277-348 277-343 (365)
194 3dr2_A Exported gluconolactona 92.0 4.1 0.00014 37.1 15.1 46 286-337 251-296 (305)
195 2vpj_A Kelch-like protein 12; 92.0 6.7 0.00023 35.4 23.8 98 58-169 31-143 (301)
196 2hqs_A Protein TOLB; TOLB, PAL 92.0 8.9 0.0003 36.7 21.5 102 48-164 143-259 (415)
197 3ei3_B DNA damage-binding prot 91.8 8.1 0.00028 35.9 21.9 164 48-241 175-349 (383)
198 4e54_B DNA damage-binding prot 91.8 6.3 0.00022 37.8 16.8 103 49-169 222-335 (435)
199 2dg1_A DRP35, lactonase; beta 91.7 7.6 0.00026 35.4 19.0 60 94-165 66-125 (333)
200 1pjx_A Dfpase, DIISOPROPYLFLUO 91.5 7.6 0.00026 34.9 16.4 22 49-71 83-104 (314)
201 3ott_A Two-component system se 91.3 15 0.0005 38.3 20.1 85 284-373 527-619 (758)
202 3qqz_A Putative uncharacterize 91.1 6 0.00021 35.6 14.7 36 42-78 30-68 (255)
203 2xyi_A Probable histone-bindin 91.0 11 0.00039 36.0 18.6 19 285-303 335-353 (430)
204 1nr0_A Actin interacting prote 90.8 15 0.00051 37.1 23.0 105 215-345 205-310 (611)
205 1zgk_A Kelch-like ECH-associat 90.7 6.8 0.00023 35.7 15.1 40 294-337 90-129 (308)
206 2ece_A 462AA long hypothetical 90.2 15 0.00051 36.1 17.6 142 28-171 58-247 (462)
207 1ri6_A Putative isomerase YBHE 89.9 11 0.00037 34.0 21.5 62 285-348 243-308 (343)
208 3dr2_A Exported gluconolactona 89.6 12 0.00039 34.0 16.9 23 48-71 96-119 (305)
209 3scy_A Hypothetical bacterial 89.5 13 0.00044 34.3 24.5 68 277-347 218-290 (361)
210 3hrp_A Uncharacterized protein 89.4 16 0.00053 35.1 25.6 99 48-165 141-253 (409)
211 3scy_A Hypothetical bacterial 88.9 14 0.00048 34.0 24.0 67 277-348 266-337 (361)
212 3f3f_A Nucleoporin SEH1; struc 88.2 14 0.00047 33.0 15.8 64 48-111 71-151 (351)
213 2w18_A PALB2, fancn, partner a 88.1 18 0.00062 34.2 20.9 153 151-346 202-355 (356)
214 2p9w_A MAL S 1 allergenic prot 88.0 2.6 9E-05 39.7 9.9 22 57-78 99-123 (334)
215 1npe_A Nidogen, entactin; glyc 87.8 14 0.00047 32.6 19.4 56 285-347 179-235 (267)
216 1zgk_A Kelch-like ECH-associat 87.3 17 0.00057 33.0 24.1 112 43-169 19-152 (308)
217 3jro_A Fusion protein of prote 87.1 5.4 0.00019 41.7 12.9 27 284-310 170-196 (753)
218 1xfd_A DIP, dipeptidyl aminope 87.0 19 0.00066 36.8 17.0 99 48-165 27-147 (723)
219 2ece_A 462AA long hypothetical 86.6 26 0.00088 34.4 16.9 163 58-241 43-247 (462)
220 3dw8_B Serine/threonine-protei 86.6 5.3 0.00018 37.9 11.7 24 284-307 354-377 (447)
221 1mda_H Methylamine dehydrogena 86.3 4.3 0.00015 38.7 10.7 84 223-338 47-144 (368)
222 3ii7_A Kelch-like protein 7; p 86.1 19 0.00065 32.4 22.4 40 294-337 169-208 (306)
223 3dw8_B Serine/threonine-protei 86.1 23 0.00078 33.4 17.3 22 48-69 40-61 (447)
224 1npe_A Nidogen, entactin; glyc 85.9 14 0.00046 32.7 13.4 102 48-170 133-247 (267)
225 3o4h_A Acylamino-acid-releasin 85.6 20 0.00067 35.7 15.8 23 285-307 207-231 (582)
226 3ii7_A Kelch-like protein 7; p 85.5 20 0.00069 32.2 16.4 39 294-336 118-156 (306)
227 3dwl_C Actin-related protein 2 85.5 2.2 7.4E-05 39.8 8.0 20 284-303 158-177 (377)
228 2p4o_A Hypothetical protein; p 84.6 23 0.00078 32.0 16.5 101 48-163 82-201 (306)
229 2uvk_A YJHT; unknown function, 84.3 25 0.00087 32.4 24.2 90 45-136 16-126 (357)
230 2vpj_A Kelch-like protein 12; 84.2 23 0.00078 31.7 24.4 65 94-169 31-96 (301)
231 2xn4_A Kelch-like protein 2; s 83.8 24 0.00082 31.7 21.5 39 294-336 124-162 (302)
232 3ott_A Two-component system se 83.8 44 0.0015 34.6 18.5 99 48-165 73-178 (758)
233 3v65_B Low-density lipoprotein 83.4 31 0.0011 32.6 19.9 26 286-311 300-326 (386)
234 3m0c_C LDL receptor, low-densi 83.1 43 0.0015 35.4 17.4 27 284-310 612-639 (791)
235 2xzm_R RACK1; ribosome, transl 82.9 28 0.00096 31.8 18.3 28 49-76 89-116 (343)
236 1n7d_A LDL receptor, low-densi 82.7 22 0.00075 36.9 14.9 27 285-311 595-622 (699)
237 2qe8_A Uncharacterized protein 82.4 22 0.00075 32.8 13.6 124 28-168 9-160 (343)
238 2xyi_A Probable histone-bindin 81.5 37 0.0013 32.2 15.6 59 285-348 291-353 (430)
239 1k32_A Tricorn protease; prote 80.8 30 0.001 37.4 15.9 94 217-346 395-500 (1045)
240 2ecf_A Dipeptidyl peptidase IV 80.4 25 0.00084 36.1 14.4 16 221-236 171-186 (741)
241 2bkl_A Prolyl endopeptidase; m 80.3 55 0.0019 33.5 19.8 53 293-347 294-348 (695)
242 3v64_C Agrin; beta propeller, 80.3 38 0.0013 31.5 18.1 26 285-310 256-282 (349)
243 3sov_A LRP-6, low-density lipo 80.2 22 0.00077 32.7 12.7 101 48-165 133-242 (318)
244 3tc9_A Hypothetical hydrolase; 80.1 44 0.0015 32.2 20.4 23 48-70 149-171 (430)
245 3p5b_L Low density lipoprotein 79.8 43 0.0015 31.9 15.7 104 48-169 213-328 (400)
246 3c5m_A Oligogalacturonate lyas 79.1 39 0.0013 31.0 18.3 24 49-72 93-116 (396)
247 1n7d_A LDL receptor, low-densi 78.3 35 0.0012 35.4 14.7 58 285-346 552-610 (699)
248 1ijq_A LDL receptor, low-densi 77.3 43 0.0015 30.5 15.5 130 19-165 100-242 (316)
249 3g4e_A Regucalcin; six bladed 77.0 40 0.0014 30.1 21.5 25 128-167 64-88 (297)
250 1tl2_A L10, protein (tachylect 76.5 13 0.00043 33.0 8.9 23 287-311 186-208 (236)
251 2ojh_A Uncharacterized protein 75.8 38 0.0013 29.2 20.8 54 93-165 21-76 (297)
252 4hw6_A Hypothetical protein, I 75.7 59 0.002 31.3 24.6 23 49-71 153-175 (433)
253 1xd5_A Gastrodianin-1, antifun 75.7 17 0.0006 27.8 8.9 52 290-347 56-107 (112)
254 2qe8_A Uncharacterized protein 75.4 49 0.0017 30.3 13.6 29 45-74 126-160 (343)
255 3c5m_A Oligogalacturonate lyas 74.6 52 0.0018 30.1 16.4 20 292-311 166-185 (396)
256 2xn4_A Kelch-like protein 2; s 74.1 48 0.0016 29.5 21.4 41 294-338 173-213 (302)
257 3mez_B Mannose-specific lectin 73.8 21 0.00072 27.4 8.9 22 290-312 63-84 (113)
258 2oaj_A Protein SNI1; WD40 repe 73.4 1E+02 0.0034 32.9 17.6 151 94-311 39-190 (902)
259 2ghs_A AGR_C_1268P; regucalcin 73.3 54 0.0019 29.8 14.5 15 151-165 70-84 (326)
260 1tl2_A L10, protein (tachylect 73.2 13 0.00043 33.0 8.1 20 219-240 190-209 (236)
261 2woz_A Kelch repeat and BTB do 73.2 53 0.0018 29.6 13.5 119 44-169 154-293 (318)
262 1jof_A Carboxy-CIS,CIS-muconat 71.9 61 0.0021 29.8 21.7 23 49-72 52-75 (365)
263 3s25_A Hypothetical 7-bladed b 71.6 60 0.0021 29.6 23.1 104 46-168 23-144 (302)
264 1jof_A Carboxy-CIS,CIS-muconat 71.5 63 0.0021 29.7 18.4 61 277-340 152-215 (365)
265 2uvk_A YJHT; unknown function, 70.0 67 0.0023 29.4 19.4 70 94-169 31-101 (357)
266 2ojh_A Uncharacterized protein 70.0 52 0.0018 28.2 20.7 51 20-71 24-76 (297)
267 4gq1_A NUP37; propeller, trans 69.4 73 0.0025 29.7 21.0 56 286-347 331-388 (393)
268 3s94_A LRP-6, low-density lipo 68.7 1E+02 0.0034 31.4 15.1 143 48-235 95-247 (619)
269 3a0c_A Mannose/sialic acid-bin 68.6 31 0.0011 26.2 8.8 22 291-313 58-79 (110)
270 3fm0_A Protein CIAO1; WDR39,SG 66.5 77 0.0026 28.8 16.2 25 49-73 29-53 (345)
271 2pm7_B Protein transport prote 66.1 71 0.0024 28.3 20.9 63 285-348 220-285 (297)
272 3v65_B Low-density lipoprotein 65.5 91 0.0031 29.3 24.5 57 285-347 258-315 (386)
273 2j04_B YDR362CP, TAU91; beta p 65.4 1.1E+02 0.0038 30.2 14.5 21 49-69 226-246 (524)
274 2xdw_A Prolyl endopeptidase; a 65.3 36 0.0012 35.0 11.1 105 47-163 296-416 (710)
275 2woz_A Kelch repeat and BTB do 65.0 79 0.0027 28.4 14.5 40 294-337 127-166 (318)
276 1xd5_A Gastrodianin-1, antifun 64.4 45 0.0015 25.4 10.4 19 220-240 58-76 (112)
277 3a0c_A Mannose/sialic acid-bin 63.8 38 0.0013 25.8 8.4 21 220-241 59-79 (110)
278 2xzm_R RACK1; ribosome, transl 63.7 86 0.0029 28.4 24.0 96 49-160 40-148 (343)
279 1fwx_A Nitrous oxide reductase 63.0 66 0.0023 32.6 12.0 44 292-339 173-216 (595)
280 4a0p_A LRP6, LRP-6, low-densit 62.1 1.4E+02 0.0048 30.3 17.3 22 285-306 218-240 (628)
281 3amr_A 3-phytase; beta-propell 61.7 1.1E+02 0.0037 28.8 18.0 29 285-313 244-274 (355)
282 1xfd_A DIP, dipeptidyl aminope 61.4 1.4E+02 0.0048 30.1 20.5 50 58-108 91-148 (723)
283 3o4h_A Acylamino-acid-releasin 60.0 42 0.0014 33.2 10.2 98 50-165 124-231 (582)
284 3fm0_A Protein CIAO1; WDR39,SG 59.2 1E+02 0.0036 27.9 16.8 23 284-306 117-139 (345)
285 4a0p_A LRP6, LRP-6, low-densit 59.1 1.6E+02 0.0054 29.9 24.6 50 285-340 178-228 (628)
286 3azo_A Aminopeptidase; POP fam 59.0 1.5E+02 0.0051 29.6 18.2 23 285-307 348-373 (662)
287 2xdw_A Prolyl endopeptidase; a 59.0 1.4E+02 0.0048 30.4 14.3 64 94-169 311-376 (710)
288 2w18_A PALB2, fancn, partner a 57.9 1.3E+02 0.0043 28.4 20.4 162 48-239 144-322 (356)
289 1k3i_A Galactose oxidase precu 57.8 1.6E+02 0.0056 29.7 25.9 108 48-169 197-329 (656)
290 3dzw_A Agglutinin; lectin, man 57.2 55 0.0019 24.7 8.2 21 291-312 57-77 (109)
291 1b2p_A Protein (lectin); manno 56.3 67 0.0023 24.8 8.9 22 291-313 68-89 (119)
292 3mez_B Mannose-specific lectin 56.1 65 0.0022 24.6 9.3 60 285-348 25-84 (113)
293 4h3o_A Lectin; cadmium, plant 56.1 62 0.0021 24.3 10.8 21 220-241 59-79 (105)
294 2z3z_A Dipeptidyl aminopeptida 55.2 1.8E+02 0.006 29.3 22.6 58 94-163 235-295 (706)
295 3q6k_A 43.2 kDa salivary prote 54.2 70 0.0024 30.5 10.0 62 94-169 123-197 (381)
296 3m0c_C LDL receptor, low-densi 53.8 2.2E+02 0.0074 29.9 24.8 59 285-347 570-629 (791)
297 3das_A Putative oxidoreductase 52.2 1.5E+02 0.0052 27.6 13.0 63 286-348 44-114 (347)
298 1z68_A Fibroblast activation p 51.2 57 0.002 33.2 9.7 99 48-165 26-143 (719)
299 2fp8_A Strictosidine synthase; 47.2 1.6E+02 0.0053 26.3 12.8 95 49-160 197-312 (322)
300 1k32_A Tricorn protease; prote 46.6 2.4E+02 0.0083 30.2 14.2 18 151-168 399-416 (1045)
301 1yr2_A Prolyl oligopeptidase; 43.1 2.7E+02 0.0094 28.4 13.5 61 285-348 328-393 (741)
302 1cru_A Protein (soluble quinop 42.1 1.7E+02 0.0057 28.3 10.9 53 286-338 39-100 (454)
303 3dzw_A Agglutinin; lectin, man 41.8 1.1E+02 0.0037 23.0 8.1 58 285-348 20-77 (109)
304 2hes_X YDR267CP; beta-propelle 41.6 1.9E+02 0.0066 25.8 15.4 228 48-347 70-327 (330)
305 4h3o_A Lectin; cadmium, plant 40.1 1.1E+02 0.0039 22.8 11.0 62 47-113 18-79 (105)
306 2xzh_A Clathrin heavy chain 1; 38.9 83 0.0028 29.6 7.5 56 48-107 271-326 (365)
307 3q6k_A 43.2 kDa salivary prote 38.8 66 0.0023 30.6 7.1 67 221-311 122-197 (381)
308 1b2p_A Protein (lectin); manno 37.2 1.4E+02 0.0047 22.9 11.5 20 220-240 69-88 (119)
309 2zwa_A Leucine carboxyl methyl 36.1 2.4E+02 0.0084 28.8 11.6 110 48-167 500-639 (695)
310 2jxw_A WW domain-binding prote 35.6 1.1E+02 0.0036 21.5 6.2 19 151-169 55-73 (75)
311 3r0e_B Lectin; carbohydrate bi 35.0 1.4E+02 0.0049 22.4 7.5 22 290-312 60-81 (110)
312 4gq1_A NUP37; propeller, trans 34.2 2.8E+02 0.0095 25.5 15.7 24 51-74 202-225 (393)
313 2dpf_A Curculin; sweet taste, 33.9 1.5E+02 0.0052 22.4 10.2 20 220-240 59-78 (115)
314 2j04_B YDR362CP, TAU91; beta p 33.8 1.7E+02 0.0059 28.7 9.7 106 48-169 277-394 (524)
315 4a5s_A Dipeptidyl peptidase 4 33.6 2E+02 0.0068 29.4 10.5 98 48-165 27-145 (740)
316 2bkl_A Prolyl endopeptidase; m 33.4 3.6E+02 0.012 27.1 12.4 108 44-164 277-400 (695)
317 2pm7_B Protein transport prote 32.7 2.5E+02 0.0085 24.5 13.6 21 49-69 68-88 (297)
318 3a9g_A Putative uncharacterize 32.2 2.8E+02 0.0097 25.5 10.5 101 283-393 38-153 (354)
319 2xzh_A Clathrin heavy chain 1; 31.6 98 0.0033 29.1 6.7 30 284-313 271-300 (365)
320 1yr2_A Prolyl oligopeptidase; 29.4 3E+02 0.01 28.1 11.0 104 47-164 326-444 (741)
321 3amr_A 3-phytase; beta-propell 28.7 3.7E+02 0.013 25.2 11.2 20 151-170 253-273 (355)
322 2jxw_A WW domain-binding prote 28.3 94 0.0032 21.8 4.8 60 221-311 14-73 (75)
323 4hw6_A Hypothetical protein, I 28.3 3.9E+02 0.013 25.3 17.9 18 220-237 248-265 (433)
324 3r0e_A Lectin; carbohydrate bi 26.2 1.6E+02 0.0055 22.1 6.2 20 220-240 57-76 (109)
325 2ism_A Putative oxidoreductase 25.8 3.8E+02 0.013 24.4 12.3 60 286-348 43-112 (352)
326 3v64_C Agrin; beta propeller, 25.5 3.8E+02 0.013 24.3 26.1 57 285-347 215-272 (349)
327 3p5b_L Low density lipoprotein 25.5 4.2E+02 0.014 24.7 26.2 59 285-347 258-317 (400)
328 1bpo_A Protein (clathrin); cla 25.4 1.8E+02 0.006 28.6 7.5 56 48-107 270-325 (494)
329 3mez_A Mannose-specific lectin 25.0 2.2E+02 0.0075 21.4 7.5 22 291-312 57-78 (111)
330 2zwa_A Leucine carboxyl methyl 24.9 5.6E+02 0.019 26.0 16.5 43 294-337 568-615 (695)
331 2dpf_A Curculin; sweet taste, 24.0 2.3E+02 0.0079 21.3 8.1 53 290-348 26-78 (115)
332 1bpo_A Protein (clathrin); cla 23.5 1.7E+02 0.0059 28.6 7.0 30 284-313 270-299 (494)
333 3r0e_B Lectin; carbohydrate bi 23.5 1.6E+02 0.0054 22.2 5.7 20 220-240 62-81 (110)
334 2g8s_A Glucose/sorbosone dehyd 22.5 3.1E+02 0.011 25.1 8.8 18 287-305 32-49 (353)
335 3azo_A Aminopeptidase; POP fam 21.4 5.9E+02 0.02 25.0 17.9 23 285-307 254-278 (662)
336 3mez_A Mannose-specific lectin 20.8 2.7E+02 0.0092 20.8 7.8 58 285-348 21-78 (111)
337 3s9j_A Member of DUF4221 famil 20.5 5.3E+02 0.018 24.1 12.1 66 95-174 53-122 (369)
338 3sre_A PON1, serum paraoxonase 20.0 5.2E+02 0.018 23.9 13.3 20 48-67 60-92 (355)
No 1
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=100.00 E-value=2.8e-41 Score=351.16 Aligned_cols=363 Identities=19% Similarity=0.318 Sum_probs=267.2
Q ss_pred CCCCCCCCCCCccccCCcccCccccccceeeeEEEeCC--ceeeCcEEECCEEEEecc-CCcEEEEEC-CCCccceEeec
Q 039692 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAGK--DISATPAVANGVVYFPSW-NGYLYAVNA-FNGALIWEQNL 76 (417)
Q Consensus 1 Wp~~~~~~~~~~~~~~~~~i~~~~~~~~~~~W~~~~~~--~~~~~p~~~~g~v~v~~~-~g~l~ald~-~tG~~~W~~~~ 76 (417)
||||++++.++||++..+ |++.|+.+++++|++.++. .+.++|++.+++||+++. ++.|+|||+ +||+++|++++
T Consensus 14 W~~~gg~~~~~~~s~l~~-i~~~nv~~l~~~W~~~~g~~~g~~~tP~v~~g~vyv~~~~~~~v~AlD~~~tG~~lW~~~~ 92 (599)
T 1w6s_A 14 WVMPGKNYDSNNFSDLKQ-INKGNVKQLRPAWTFSTGLLNGHEGAPLVVDGKMYIHTSFPNNTFALGLDDPGTILWQDKP 92 (599)
T ss_dssp BCSTTSSTTCCCEECCCS-SCTTTGGGEEEEEEEECSCCSCCCSCCEEETTEEEEECSTTTCEEEEETTCTTSEEEEECC
T ss_pred CcccCCCCCCCeecchhc-cCccccCCCcEEEEEECCCCCCceeccEEECCEEEEEeCCCCEEEEEeCCCCCcEEEEECC
Confidence 999999999999999887 9999999999999999975 357899999999999998 899999999 99999999998
Q ss_pred ccccCCcc--------ee-eE--Eeee----e------eEEEEEecCCCceeeeeecCCC-CCcceeeceeEEcCeEEEE
Q 039692 77 SKLTGLSG--------TG-IV--VNVT----V------AVVVAVSRSNGELVWSTQIDPR-PRSQITMSGSVYMGAFYVG 134 (417)
Q Consensus 77 ~~~~~~~p--------~~-~v--~~~~----v------~~l~ald~~tG~~~W~~~~~~~-~~~~~~~sp~v~~~~v~v~ 134 (417)
.......+ .+ .+ .++. + +.|+|||++||+++|++++... ....+.++|++.+++||++
T Consensus 93 ~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~ssP~v~~g~V~vg 172 (599)
T 1w6s_A 93 KQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQLDGNVAALNAETGETVWKVENSDIKVGSTLTIAPYVVKDKVIIG 172 (599)
T ss_dssp CCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEEC
T ss_pred CCCccccccccccccccceEEEecCCcceeEEEEEcCCCEEEEEECCCCCEEEeecCCCCCccceeecCCEEECCEEEEE
Confidence 75321110 01 13 2322 2 8999999999999999997542 1224778999999999998
Q ss_pred eCCccCccccCcccCCCceEEEEeCCCCceeceeeecCCCCC----C-------------------CC---CCCCccccC
Q 039692 135 LSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNGG----K-------------------RG---GYSGAAVWG 188 (417)
Q Consensus 135 ~~~~~~~~~~~~~~~~~g~l~ald~~tG~~~W~~~~~~~~~~----~-------------------~~---~~~gg~~~~ 188 (417)
....+.. .++.|+|||++||+++|+++..+.... . .+ ..++++.|+
T Consensus 173 ~~g~e~g--------~~g~v~A~D~~TG~~~W~~~~~~~~~~~~~~p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~ 244 (599)
T 1w6s_A 173 SSGAELG--------VRGYLTAYDVKTGEQVWRAYATGPDKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWG 244 (599)
T ss_dssp CBCGGGT--------CCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCS
T ss_pred ecccccC--------CCCeEEEEECCCCcEEEEEcCCCCccccccccccccccccccccccccccCCCcceecCCCcccc
Confidence 7643221 158999999999999999998542200 0 00 124567786
Q ss_pred CCceeecccCcccCC-CCCCCCCCCCcccCCCCCCeEEEEECCCCceEEEecCCCCcceeeeccCCCCCCCCCCCCCCCc
Q 039692 189 SSPAIDVIRRQKQNN-QTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDAD 267 (417)
Q Consensus 189 ~~pa~d~~~~~~~~~-~~~~p~~~~~~v~~~~~~~~l~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~ 267 (417)
.+++|++.+..+.. ....|.-.........+.+.|+|||++||+++|+++..+++.|.+ +
T Consensus 245 -~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~W~~q~~~~d~wd~------------------d 305 (599)
T 1w6s_A 245 -WYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTGEAKFGYQKTPHDEWDY------------------A 305 (599)
T ss_dssp -CCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEEEESSTTCSSCC------------------C
T ss_pred -ceeEeCCCCEEEEeCCCCccccCcccCCCccccceEEEEeCCCCceeeEeecCCCccccc------------------c
Confidence 47898887743211 111111111111222345789999999999999999999888844 4
Q ss_pred cCCCceEEEEe-cCCeeeeEEEEEcccceEEEEECCCCcEEEEeecCCC-------------------------------
Q 039692 268 FGEAPMLLTIS-TNGRFRDVVVAVQKSGFAWAFDRDSGDIIWFKLAGPG------------------------------- 315 (417)
Q Consensus 268 ~~~~p~v~~~~-~~G~~~~~v~~~~~~G~l~ald~~tG~~lW~~~~~~~------------------------------- 315 (417)
..++|++.+.. .+|+...+++.++++|.||+||++||+++|+.+..+.
T Consensus 306 ~~~~p~l~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~ 385 (599)
T 1w6s_A 306 GVNVMMLSEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVSANKLDDTVNVFKSVDLKTGQPVRDPEYGTRMDHLAKDI 385 (599)
T ss_dssp CCCCCEEEEEECTTSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCCEEECGGGCCCTTCCEEEE
T ss_pred CCCccEEEeccccCCcEEEEEEEECCCcEEEEEECCCCCEeecccccCCcccccccccCCCceeeccccCCCCCCCccEe
Confidence 45789999876 6776567888899999999999999999999875420
Q ss_pred --CCCCcceec-cc--------------------------------------------c------cCCeEEEEeccCCce
Q 039692 316 --GREGGGVWG-AA--------------------------------------------T------DGRRVYTNIVNNDRI 342 (417)
Q Consensus 316 --~~~g~~~~~-~~--------------------------------------------~------~~~~vy~~~~~~~~~ 342 (417)
...|+..+. ++ . ..+.|++.|..++++
T Consensus 386 ~P~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~p~~~~~~~~~~G~l~A~D~~tG~~ 465 (599)
T 1w6s_A 386 CPSAMGYHNQGHDSYDPKRELFFMGINHICMDWEPFMLPYKAGQFFVGATLNMYPGPKGDRQNYEGLGQIKAYNAITGDY 465 (599)
T ss_dssp SSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSBTTTTBCCEEEEEECTTTCCE
T ss_pred ccCcccccCCCCccCCCCCCEEEEeccccceeeecccccccCCcceecccceeccCCcCCcccCCCcCeEEEEECCCCCE
Confidence 001111110 00 0 236788889999999
Q ss_pred eeeecCCCCCCCccceeeeCCeEEeccCCCC--------CCeec---------ccccc--cCCeEEEec
Q 039692 343 IWSTADPSNETAHGPVTVVNGVLFAGSVSAN--------GSTVY---------GGVPA--SYGCIYLGN 392 (417)
Q Consensus 343 ~W~~~~~~~~~~~~p~~~~~~~v~~~~~~g~--------g~~~~---------~sp~~--~~g~lyv~~ 392 (417)
+|+.+... ...++|+++++++||+++.+|. |+.+| ++|++ +||++||..
T Consensus 466 ~W~~~~~~-~~~~g~~~tagg~vf~gt~dg~l~A~D~~tG~~lW~~~l~~g~~~~P~~y~~~G~qyv~~ 533 (599)
T 1w6s_A 466 KWEKMERF-AVWGGTMATAGDLVFYGTLDGYLKARDSDTGDLLWKFKIPSGAIGYPMTYTHKGTQYVAI 533 (599)
T ss_dssp EEEEEESS-CCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEEE
T ss_pred EeEecCCC-CccCcceEecCCEEEEECCCCeEEEEECCCCCEEEEeeCCCCcEeccEEEEeCCEEEEEE
Confidence 99997653 5567888889999999998876 55554 78888 799999943
No 2
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=100.00 E-value=4.2e-41 Score=349.96 Aligned_cols=385 Identities=19% Similarity=0.305 Sum_probs=275.9
Q ss_pred CCCCCCCCCCCccccCCcccCccccccceeeeEEEeCCc----eeeCcEEECCEEEEeccCCcEEEEECCCCccceEeec
Q 039692 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAGKD----ISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNL 76 (417)
Q Consensus 1 Wp~~~~~~~~~~~~~~~~~i~~~~~~~~~~~W~~~~~~~----~~~~p~~~~g~v~v~~~~g~l~ald~~tG~~~W~~~~ 76 (417)
||||++++.++||++..+ |++.|+.+++++|++.++.. +.++|++.+++||+++..+.|+|||++||+++|++++
T Consensus 18 W~~~~g~~~~~~~s~l~~-i~~~n~~~~~~~W~~~~~~~~~~g~~~~P~v~~g~vyv~~~~~~v~AlD~~tG~~~W~~~~ 96 (582)
T 1flg_A 18 VLQYGMGTHAQRWSPLKQ-VNADNVFKLTPAWSYSFGDEKQRGQESQAIVSDGVIYVTASYSRLFALDAKTGKRLWTYNH 96 (582)
T ss_dssp BCSTTSSTTCCCEECCCS-SCTTTGGGCEEEEEEECCTTCCSCCCCCCEEETTEEEEEETTTEEEEEESSSCCEEEEEEC
T ss_pred ccccCCCCCCCccCchhh-cCccccCCCcEEEEEECCCccCCcceeccEEECCEEEEEcCCCCEEEEECCCCcEEEEEcC
Confidence 999999999999999987 99999999999999999853 3689999999999999866799999999999999998
Q ss_pred ccccCC---------cceeeEEeee--e----eEEEEEecCCCceeeeeecCCCC-CcceeeceeEEcC------eEEEE
Q 039692 77 SKLTGL---------SGTGIVVNVT--V----AVVVAVSRSNGELVWSTQIDPRP-RSQITMSGSVYMG------AFYVG 134 (417)
Q Consensus 77 ~~~~~~---------~p~~~v~~~~--v----~~l~ald~~tG~~~W~~~~~~~~-~~~~~~sp~v~~~------~v~v~ 134 (417)
...... .|. +.++. + +.|+|||++||+++|++++.... ...+.++|++.++ .||++
T Consensus 97 ~~~~~~~~~~~~~~~g~a--~~~~~v~~~t~dg~l~AlD~~TG~~~W~~~~~~~~~~~~~~~sP~v~~~~~~G~~~v~vg 174 (582)
T 1flg_A 97 RLPDDIRPCCDVVNRGAA--IYGDKVFFGTLDASVVALNKNTGKVVWKKKFADHGAGYTMTGAPTIVKDGKTGKVLLIHG 174 (582)
T ss_dssp CCCTTCCCSSCSCCCCCE--EETTEEEEEETTTEEEEEESSSCCEEEEEECSCGGGTCBCCSCCEEEECTTTCCEEEEEC
T ss_pred CCCcccccccccCCCccE--EECCEEEEEeCCCEEEEEECCCCCEEeeecCCCCCcCcccccCCEEeCCCcCCcEEEEEe
Confidence 754211 122 33331 2 89999999999999999975421 2246789999999 99998
Q ss_pred eCCccCccccCcccCCCceEEEEeCCCCceeceeeecCCC--------------CCC---C------------CCCCCcc
Q 039692 135 LSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDN--------------GGK---R------------GGYSGAA 185 (417)
Q Consensus 135 ~~~~~~~~~~~~~~~~~g~l~ald~~tG~~~W~~~~~~~~--------------~~~---~------------~~~~gg~ 185 (417)
..+.+.. .++.|+|||++||+++|+++..... .+. . -...|+.
T Consensus 175 ~~~~e~~--------~~g~v~alD~~tG~~~W~~~~~~~~~~p~~~~~~~~~g~~g~~~w~~~~~~~~g~~~~~~~gGg~ 246 (582)
T 1flg_A 175 SSGDEFG--------VVGRLFARDPDTGEEIWMRPFVEGHMGRLNGKDSTVTGDVKAPSWPDDRNSPTGKVESWSHGGGA 246 (582)
T ss_dssp CBCGGGC--------CBCEEEEECTTTCCEEEEEESSTTCEEEETTEEEEESSCTTCTTSCBCTTSTTSBCGGGGGCBCC
T ss_pred ccccccC--------CCCEEEEEECCCCCEEeecCCCccccccccCcccccccccccccCCCccccccccccccccCCcc
Confidence 7543211 2589999999999999988753110 000 0 0124677
Q ss_pred ccCCCceeecccCcccCCC-CCCCCCCCC--------cccCCCCCCeEEEEECCCCceEEEecCCCCcceeeeccCCCCC
Q 039692 186 VWGSSPAIDVIRRQKQNNQ-TTKPTHPDQ--------CISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNP 256 (417)
Q Consensus 186 ~~~~~pa~d~~~~~~~~~~-~~~p~~~~~--------~v~~~~~~~~l~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~ 256 (417)
.|. .+++|++.+..+... ...|..... +++...+.+.|+|||++||+++|+++..+++.|.+
T Consensus 247 ~w~-~~a~d~~~g~vyv~~gn~~~~~~~~r~~~gg~~~~~d~~~~~~v~AlD~~TG~~~W~~q~~~~d~wd~-------- 317 (582)
T 1flg_A 247 PWQ-SASFDAETNTIIVGAGNPGPWNTWARTAKGGNPHDYDSLYTSGQVGVDPSSGEVKWFYQHTPNDAWDF-------- 317 (582)
T ss_dssp CCS-CCEEETTTTEEEEEECCBSSSCGGGGSCTTSCSTTCCCTTCSEEEEECTTTCCEEEEEESSTTCCSCC--------
T ss_pred ccC-CceEcCCCCEEEEeCCCCCcccCcccccCCCcccccCCcccceEEEEeCCCCCEEEEEeCCCCCcccc--------
Confidence 885 589998877532100 001110000 11123345799999999999999999988877744
Q ss_pred CCCCCCCCCCccCCCceEEEEe-cCCeeeeEEEEEcccceEEEEECCCCcEEEEeecCCC--------------------
Q 039692 257 DCPPGPNLDADFGEAPMLLTIS-TNGRFRDVVVAVQKSGFAWAFDRDSGDIIWFKLAGPG-------------------- 315 (417)
Q Consensus 257 ~c~~~~~~~~~~~~~p~v~~~~-~~G~~~~~v~~~~~~G~l~ald~~tG~~lW~~~~~~~-------------------- 315 (417)
+..++|++.+.. .+|+..++|++++++|.||+||++||+++|+.+..+.
T Consensus 318 ----------~~~~~p~l~~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~ 387 (582)
T 1flg_A 318 ----------SGNNELVLFDYKAKDGKIVKATAHADRNGFFYVVDRSNGKLQNAFPFVDNITWASHIDLKTGRPVEREGQ 387 (582)
T ss_dssp ----------CCCCCCEEEEEECSSSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSSCCCSEEEECTTTCCEEECTTC
T ss_pred ----------cCCCCcEEEeeecCCCCEEEEEEEECCCceEEEEECCCCCEecccccccCccccccccccCCCEeEcccc
Confidence 334689998765 6776557899999999999999999999999887530
Q ss_pred -------------------CCCCcceec-cccc--------------------------------------------CCe
Q 039692 316 -------------------GREGGGVWG-AATD--------------------------------------------GRR 331 (417)
Q Consensus 316 -------------------~~~g~~~~~-~~~~--------------------------------------------~~~ 331 (417)
...|+..+. ++++ .+.
T Consensus 388 ~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~p~~~~~~G~ 467 (582)
T 1flg_A 388 RPPLPEPGQKHGKAVEVSPPFLGGKNWNPMAYSQDTGLFYVPANHWKEDYWTEEVSYTKGSAYLGMGFRIKRMYDDHVGS 467 (582)
T ss_dssp SCCCCCTTCSSCCCEEESSCTTCSSCSSCCEECTTTCCEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEESCSSCSEE
T ss_pred CCccccccccCCCceEECcCCccccCCCCceECCCCCEEEEechhcceeeecccccccCCCceeccceeecCCCCCCcce
Confidence 011111111 1111 356
Q ss_pred EEEEeccCCceeeeecCCCCCCCccceeeeCCeEEeccCCCC--------CCeec---------ccccc--cCCeEEEe-
Q 039692 332 VYTNIVNNDRIIWSTADPSNETAHGPVTVVNGVLFAGSVSAN--------GSTVY---------GGVPA--SYGCIYLG- 391 (417)
Q Consensus 332 vy~~~~~~~~~~W~~~~~~~~~~~~p~~~~~~~v~~~~~~g~--------g~~~~---------~sp~~--~~g~lyv~- 391 (417)
|++.|..+++++|+.+... ...++|+++++++||+++.+|. |+..| ++|++ .||++||.
T Consensus 468 l~A~D~~tG~~~W~~~~~~-~~~~g~~~tagglvf~g~~dg~l~A~D~~tG~~lW~~~~~~g~~a~P~~y~~~G~qYv~~ 546 (582)
T 1flg_A 468 LRAMDPVSGKVVWEHKEHL-PLWAGVLATAGNLVFTGTGDGYFKAFDAKSGKELWKFQTGSGIVSPPITWEQDGEQYLGV 546 (582)
T ss_dssp EEEECTTTCCEEEEEEESS-CCCSCCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEEE
T ss_pred EEEEECCCCCEEEEecCCC-CCcccceEeCCCEEEEECCCCcEEEEECCCCCEEEEecCCCCcccCceEEEECCEEEEEE
Confidence 7777888899999998753 5567788899999999998876 55554 77887 69999995
Q ss_pred -cCeeeeccCC-------CCCCCCCCEEEEEEe
Q 039692 392 -NGYTVSLGKF-------HPTWTPGTSLYAFCT 416 (417)
Q Consensus 392 -~~~~~~~~~~-------~~~~~~~~~~~~~~~ 416 (417)
+|++...+-. +....+++.|++|.|
T Consensus 547 ~~G~gg~~~~~~~~~~~~~~~~~~g~~~~~f~l 579 (582)
T 1flg_A 547 TVGYGGAVPLWGGDMADLTRPVAQGGSFWVFKL 579 (582)
T ss_dssp EECCCSHHHHHCTHHHHHHTTCCCCCEEEEEEC
T ss_pred EccCCCcccccccccccccccCCCCCEEEEEeC
Confidence 4433311100 112467999999987
No 3
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=100.00 E-value=4.9e-40 Score=341.47 Aligned_cols=361 Identities=18% Similarity=0.302 Sum_probs=260.9
Q ss_pred CCCCCCCCCCCccccCCcccCccccccceeeeEEEeCC--ceeeCcEEECCEEEEecc-CCcEEEEEC-CCCccceEeec
Q 039692 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAGK--DISATPAVANGVVYFPSW-NGYLYAVNA-FNGALIWEQNL 76 (417)
Q Consensus 1 Wp~~~~~~~~~~~~~~~~~i~~~~~~~~~~~W~~~~~~--~~~~~p~~~~g~v~v~~~-~g~l~ald~-~tG~~~W~~~~ 76 (417)
||||++++.+++|++..+ |++.|..+++++|++.++. .+.++|++.+++||+.+. ++.|+|||+ +||+++|++++
T Consensus 14 W~~~~g~~~~~~~s~l~~-i~~~~~~~l~~~W~~~~~~~~g~~~~P~v~~g~vyv~~~~~~~v~AlD~~~tG~~~W~~~~ 92 (571)
T 2ad6_A 14 WPIATGGYYSQHNSPLAQ-INKSNVKNVKAAWSFSTGVLNGHEGAPLVIGDMMYVHSAFPNNTYALNLNDPGKIVWQHKP 92 (571)
T ss_dssp BCSTTSSTTCCCEECCCS-SCTTTGGGCEEEEEEECSCCSCCCSCCEEETTEEEEECSTTTCEEEEETTCTTSEEEEECC
T ss_pred CcccCCCCCCCccccccc-CCcccccCccEEEEEECCCCCCcccccEEECCEEEEEeCCCCEEEEEeCCCCccEEEEEcC
Confidence 999999999999999887 9989999999999999984 367999999999999998 899999999 99999999988
Q ss_pred cccc-----------CCcceeeEEeee--e----eEEEEEecCCCceeeeeecCCCC-CcceeeceeEEcCeEEEEeCCc
Q 039692 77 SKLT-----------GLSGTGIVVNVT--V----AVVVAVSRSNGELVWSTQIDPRP-RSQITMSGSVYMGAFYVGLSSL 138 (417)
Q Consensus 77 ~~~~-----------~~~p~~~v~~~~--v----~~l~ald~~tG~~~W~~~~~~~~-~~~~~~sp~v~~~~v~v~~~~~ 138 (417)
.... ...|. +.++. + +.|+|||++||+++|++++.... ...+.++|++.+++||++....
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~--~~~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~g~v~vg~~~~ 170 (571)
T 2ad6_A 93 KQDASTKAVMCCDVVDRGLA--YGAGQIVKKQANGHLLALDAKTGKINWEVEVCDPKVGSTLTQAPFVAKDTVLMGCSGA 170 (571)
T ss_dssp CCCGGGGGGCTTCSCCCCCE--EETTEEEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEEECBCG
T ss_pred CCCccccccccccccccccE--EECCEEEEEeCCCEEEEEECCCCCEEEEecCCCCCccceeccCCEEECCEEEEEecCC
Confidence 7421 11222 44432 2 89999999999999999975421 1246789999999999988643
Q ss_pred cCccccCcccCCCceEEEEeCCCCceeceeeecCCCC---CCC-----------------------CCCCCccccCCCce
Q 039692 139 EEALPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNG---GKR-----------------------GGYSGAAVWGSSPA 192 (417)
Q Consensus 139 ~~~~~~~~~~~~~g~l~ald~~tG~~~W~~~~~~~~~---~~~-----------------------~~~~gg~~~~~~pa 192 (417)
+.. .++.|+|||++||+++|+++..+... ..+ -...++..|. .++
T Consensus 171 ~~~--------~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~p~~~~~~~~~G~~~~g~~~w~~~~~~~gg~~~w~-~~a 241 (571)
T 2ad6_A 171 ELG--------VRGAVNAFDLKTGELKWRAFATGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWG-WYA 241 (571)
T ss_dssp GGT--------CCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCS-CCE
T ss_pred ccC--------CCCEEEEEECCCCcEEEEEccCCCccccccCcccccccccccccccccccCcccceecCCCCeee-eEE
Confidence 211 15899999999999999998753210 000 0013455664 467
Q ss_pred eecccCcccCCC-CCCCCCCCCcccCCCCCCeEEEEECCCCceEEEecCCCCcceeeeccCCCCCCCCCCCCCCCccCCC
Q 039692 193 IDVIRRQKQNNQ-TTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEA 271 (417)
Q Consensus 193 ~d~~~~~~~~~~-~~~p~~~~~~v~~~~~~~~l~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~ 271 (417)
+|++.+..+... ...|...........+.+.|+|||++||+++|+++..+++.|.+ +..++
T Consensus 242 ~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~~v~Ald~~tG~~~W~~~~~~~d~~d~------------------~~~~~ 303 (571)
T 2ad6_A 242 YDPKLNLFYYGSGNPAPWNETMRPGDNKWTMTIWGRDLDTGMAKWGYQKTPHDEWDF------------------AGVNQ 303 (571)
T ss_dssp EETTTTEEEEECCCCSCSCGGGSCSCCTTTTEEEEEETTTCCEEEEEESSTTCSSCC------------------CCCCC
T ss_pred EcCCCCeEEEECCCCccccCCccCCCceeEEEEEEEecCCCcEEEEecCCCCccccc------------------ccCCC
Confidence 887665422110 01111000001111234679999999999999999987776633 33478
Q ss_pred ceEEEEecCCeeeeEEEEEcccceEEEEECCCCcEEEEeecCCC---------------------------------CCC
Q 039692 272 PMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDIIWFKLAGPG---------------------------------GRE 318 (417)
Q Consensus 272 p~v~~~~~~G~~~~~v~~~~~~G~l~ald~~tG~~lW~~~~~~~---------------------------------~~~ 318 (417)
|++.+...+|+..+++++++++|.|++||++||+++|+.+..+. ...
T Consensus 304 p~l~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~ 383 (571)
T 2ad6_A 304 MVLTDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVDPAVNVFKKVDLKTGTPVRDPEFATRMDHKGTNICPSAM 383 (571)
T ss_dssp CEEEEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCSEEECGGGCCCTTCCEEEESSCTT
T ss_pred CEEEecccCCcEEEEEEEeCCCcEEEEEECCCCCEEeeecccCCccccccccccCCceecccccCCCCCCCceEECCCCc
Confidence 99987767776556788899999999999999999999886531 011
Q ss_pred Ccceec-ccc------------------------------------------------cCCeEEEEeccCCceeeeecCC
Q 039692 319 GGGVWG-AAT------------------------------------------------DGRRVYTNIVNNDRIIWSTADP 349 (417)
Q Consensus 319 g~~~~~-~~~------------------------------------------------~~~~vy~~~~~~~~~~W~~~~~ 349 (417)
|+..+. +++ ..+.|++.|..+++++|+.+..
T Consensus 384 Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~l~a~D~~tG~~~W~~~~~ 463 (571)
T 2ad6_A 384 GFHNQGVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAMYPGPNGPTKKEMGQIRAFDLTTGKAKWTKWEK 463 (571)
T ss_dssp CSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSTTSCCCEEEEEECTTTCCEEEEEEES
T ss_pred cccCCCCceECCCCCEEEEEchhccccccccccccccCCccccccceeccCccccCCCCCCeEEEEECCCCCEEEEecCC
Confidence 111111 111 1357888888889999999865
Q ss_pred CCCCCccceeeeCCeEEeccCCCC--------CCe---------ecccccc--cCCeEEEec
Q 039692 350 SNETAHGPVTVVNGVLFAGSVSAN--------GST---------VYGGVPA--SYGCIYLGN 392 (417)
Q Consensus 350 ~~~~~~~p~~~~~~~v~~~~~~g~--------g~~---------~~~sp~~--~~g~lyv~~ 392 (417)
. ...++|+++++++||+++.+|. |+. .+++|++ .||++||++
T Consensus 464 ~-~~~~~~~~t~gg~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~~~~~~G~~yv~~ 524 (571)
T 2ad6_A 464 F-AAWGGTLYTKGGLVWYATLDGYLKALDNKDGKELWNFKMPSGGIGSPMTYSFKGKQYIGS 524 (571)
T ss_dssp S-CCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEEE
T ss_pred C-CccceeEEECCCEEEEEcCCCeEEEEECCCCCEEEEEeCCCCcEeeeEEEEECCEEEEEE
Confidence 3 5567788788999999988876 443 3478888 799999954
No 4
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=100.00 E-value=8.9e-40 Score=346.77 Aligned_cols=381 Identities=21% Similarity=0.345 Sum_probs=273.5
Q ss_pred CCCCCCCCCCCccccCCcccCccccccceeeeEEEeCCc--eeeCcEEECCEEEEeccCCcEEEEECCCCccceEeeccc
Q 039692 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAGKD--ISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSK 78 (417)
Q Consensus 1 Wp~~~~~~~~~~~~~~~~~i~~~~~~~~~~~W~~~~~~~--~~~~p~~~~g~v~v~~~~g~l~ald~~tG~~~W~~~~~~ 78 (417)
||||++++.++||++..+ |+..|+.+++++|++.++.. +.++|++.+++||+++.++.|+|||++||+++|+++...
T Consensus 22 W~~~g~~~~~~~~spl~~-i~~~n~~~l~~~W~~~~~~~~~~~~~P~v~~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~ 100 (689)
T 1yiq_A 22 WMSTGRTYDEQRYSPLKQ-ISDQNVGQLGLAWSYKLDLDRGVEATPIVVDGVMYTTGPFSVVYALDARDGRLIWKYDPQS 100 (689)
T ss_dssp BCSTTSSTTCCCEECCCS-SCTTTGGGEEEEEEEECSSCSCCCCCCEEETTEEEEECGGGCEEEEETTTCCEEEEECCCC
T ss_pred ccccCCCCCCCccCchhh-cCccccCCceEEEEEECCCCCCceecCEEECCEEEEEcCCCeEEEEECCCCceeEEEcCCC
Confidence 999999999999999987 99999999999999999864 588999999999999999999999999999999998764
Q ss_pred ccC-----------CcceeeEEeee------eeEEEEEecCCCceeeeeecC-C-CCCcceeeceeEEcCeEEEEeCCcc
Q 039692 79 LTG-----------LSGTGIVVNVT------VAVVVAVSRSNGELVWSTQID-P-RPRSQITMSGSVYMGAFYVGLSSLE 139 (417)
Q Consensus 79 ~~~-----------~~p~~~v~~~~------v~~l~ald~~tG~~~W~~~~~-~-~~~~~~~~sp~v~~~~v~v~~~~~~ 139 (417)
... ..|. +.++. .+.|+|||++||+++|+++.. + .....+.++|++.++.||++..+.+
T Consensus 101 ~~~~~~~~~~~~~~~~~~--~~~g~v~v~~~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~~~sP~v~~g~v~vg~~~~~ 178 (689)
T 1yiq_A 101 DRHRAGEACCDAVNRGVA--VWKGKVYVGVLDGRLEAIDAKTGQRAWSVDTRADHKRSYTITGAPRVVNGKVVIGNGGAE 178 (689)
T ss_dssp CGGGGGGCTTCSCCCCCE--EETTEEEEECTTSEEEEEETTTCCEEEEEECCSCTTSCCBCCSCCEEETTEEEECCBCTT
T ss_pred CccccccccccCCCCccE--EECCEEEEEccCCEEEEEECCCCCEeeeecCcCCCCCCccccCCcEEECCEEEEEeCCCc
Confidence 211 1122 33332 189999999999999999974 2 2224567899999999999876433
Q ss_pred CccccCcccCCCceEEEEeCCCCceeceeeecCCCCCCCC----------C---------CCCccccCCCceeecccCcc
Q 039692 140 EALPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNGGKRG----------G---------YSGAAVWGSSPAIDVIRRQK 200 (417)
Q Consensus 140 ~~~~~~~~~~~~g~l~ald~~tG~~~W~~~~~~~~~~~~~----------~---------~~gg~~~~~~pa~d~~~~~~ 200 (417)
.. .++.|+|||++||+++|+++..+....... . ..|+..|. .+++|++.+..
T Consensus 179 ~~--------~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~-~~~~d~~~~~v 249 (689)
T 1yiq_A 179 FG--------VRGYVTAYDAETGKEAWRFYTVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWD-SFAYDPELNLL 249 (689)
T ss_dssp TC--------CBCEEEEEETTTCCEEEEEESSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCS-CEEEETTTTEE
T ss_pred cC--------CCCEEEEEECCCCcEEEEecccCCCcccccccccccccccccCCceeeecCCCCcccc-ceeEcCCCCEE
Confidence 21 268999999999999999986432111000 0 03456775 47888876642
Q ss_pred cCCC-CCCCC-------CCCCcccCCCCCCeEEEEECCCCceEEEecCCCCcceeeeccCCCCCCCCCCCCCCCccCCCc
Q 039692 201 QNNQ-TTKPT-------HPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAP 272 (417)
Q Consensus 201 ~~~~-~~~p~-------~~~~~v~~~~~~~~l~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~p 272 (417)
+... ...|. ..++.+| .+.|+|||++||+++|+++..+++.|.+ +..+.+
T Consensus 250 y~~~~~g~~w~~~~~~~~~gd~~y----~~~v~AlD~~TG~~~W~~~~~~~d~wd~------------------~~~~~~ 307 (689)
T 1yiq_A 250 YIGVGNGSLWDPKWRSQAKGDNLF----LSSIVAVNADTGEYVWHYQTTPGDAWDY------------------TATQHM 307 (689)
T ss_dssp EEECCCEESSCHHHHHTTCSCCTT----TTEEEEEETTTCCEEEEEESSTTCCSCC------------------CCCSCE
T ss_pred EEeCCCCCccccCCCCCCCCCcee----eeeEEEEEccCCceeEeeecCCcccccc------------------cCCCCc
Confidence 2111 00110 0112222 3479999999999999999887777743 234567
Q ss_pred eEEEEecCCeeeeEEEEEcccceEEEEECCCCcEEEEeecCCC---------------------------------CCCC
Q 039692 273 MLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDIIWFKLAGPG---------------------------------GREG 319 (417)
Q Consensus 273 ~v~~~~~~G~~~~~v~~~~~~G~l~ald~~tG~~lW~~~~~~~---------------------------------~~~g 319 (417)
++.++..+|+..++|++++++|.||+||++||+++|..+..+. ...|
T Consensus 308 ~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~G 387 (689)
T 1yiq_A 308 ILAELPIDGKPRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKGMDMKTGRPILDEENAAYWKNGKRNLVTPAFWG 387 (689)
T ss_dssp EEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEEETTTTEEEECHHHHCTTTSSSCEEESSCTTC
T ss_pred EEEeeccCCcEEEEEEEECCCCeEEEEECCCCCEeccccccccccccccCccCCCcccchhhccccCCCCeeEeCCCccc
Confidence 8888888887777899999999999999999999987665321 0112
Q ss_pred cceec-cccc--------------------------------------------------------CCeEEEEeccCCce
Q 039692 320 GGVWG-AATD--------------------------------------------------------GRRVYTNIVNNDRI 342 (417)
Q Consensus 320 ~~~~~-~~~~--------------------------------------------------------~~~vy~~~~~~~~~ 342 (417)
+..+. ++++ .+.|++.|..++++
T Consensus 388 g~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~tG~~ 467 (689)
T 1yiq_A 388 AHDWQPMSYNPDTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWDPVKQQA 467 (689)
T ss_dssp SSCSSCCEEETTTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCCCSSHHHHHHHHTTCEEEEEEEETTTTEE
T ss_pred ccCCCcceECCCCCEEEEeccccceeeeeccccccccccccccccCccccccCcccccCCCCCCCcceeEEEEECCCCCe
Confidence 22221 1111 25677888888999
Q ss_pred eeeecCCCCCCCccceeeeCCeEEeccCCCC--------CCeec---------ccccc--cCCeEEEe--cCeeeeccC-
Q 039692 343 IWSTADPSNETAHGPVTVVNGVLFAGSVSAN--------GSTVY---------GGVPA--SYGCIYLG--NGYTVSLGK- 400 (417)
Q Consensus 343 ~W~~~~~~~~~~~~p~~~~~~~v~~~~~~g~--------g~~~~---------~sp~~--~~g~lyv~--~~~~~~~~~- 400 (417)
+|+.+... ....++++.++++||+++.+|. |+.+| ++|+. .||++||. +|.+...+-
T Consensus 468 ~W~~~~~~-~~~~g~~~tagglvf~gt~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~ty~~~G~qyv~~~~G~gg~~~~~ 546 (689)
T 1yiq_A 468 AWEVPYVT-IFNGGTLSTAGNLVFEGSADGRVIAYAADTGEKLWEQPAASGVMAAPVTYSVDGEQYVTFMAGWGGAFSTF 546 (689)
T ss_dssp EEEEEESS-SCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEEEEECCCTTHHHH
T ss_pred EeEccCCC-CccCccceECCCEEEEECCCCcEEEEECCCCccceeeeCCCCcccCceEEEECCEEEEEEEecCCcccccc
Confidence 99998753 4556788889999999998886 65555 66775 59999995 332221110
Q ss_pred -----CCCCCCCCCEEEEEEe
Q 039692 401 -----FHPTWTPGTSLYAFCT 416 (417)
Q Consensus 401 -----~~~~~~~~~~~~~~~~ 416 (417)
.......++.|++|.|
T Consensus 547 ~~~~~~~~~~~~g~~~~~f~l 567 (689)
T 1yiq_A 547 AGALSLRAGVQPYAQVLTYKL 567 (689)
T ss_dssp THHHHGGGCCCCCCEEEEEEE
T ss_pred ccccccccccCCCceEEEeec
Confidence 0012357889999976
No 5
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=100.00 E-value=1.3e-39 Score=344.46 Aligned_cols=381 Identities=22% Similarity=0.377 Sum_probs=274.1
Q ss_pred CCCCCCCCCCCccccCCcccCccccccceeeeEEEeCCc--eeeCcEEECCEEEEeccCCcEEEEECCCCccceEeeccc
Q 039692 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAGKD--ISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSK 78 (417)
Q Consensus 1 Wp~~~~~~~~~~~~~~~~~i~~~~~~~~~~~W~~~~~~~--~~~~p~~~~g~v~v~~~~g~l~ald~~tG~~~W~~~~~~ 78 (417)
||+|++++.+++|++..+ |+..|+.+++++|++.++.. +.++|++.+++||+++.++.|+|||++||+++|+++...
T Consensus 18 W~~~g~~~~~~~~s~l~~-i~~~n~~~l~~~W~~~~~~~~~~~~~P~v~~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~ 96 (668)
T 1kv9_A 18 WLSHGRTYAEQRFSPLKQ-IDASNVRSLGLAWYMDLDNTRGLEATPLFHDGVIYTSMSWSRVIAVDAASGKELWRYDPEV 96 (668)
T ss_dssp BCBTTBSTTCCCEECCCS-SCTTTGGGEEEEEEEECSCCSCCCCCCEEETTEEEEEEGGGEEEEEETTTCCEEEEECCCC
T ss_pred ccccCCCCCCceeCchHh-cCccccCCcceEEEEECCCCCCcccCCEEECCEEEEECCCCeEEEEECCCChhceEECCCC
Confidence 999999999999999987 99999999999999999864 588999999999999999999999999999999998764
Q ss_pred ccC-----------CcceeeEEeee--e----eEEEEEecCCCceeeeeecCCC-CCcceeeceeEEcCeEEEEeCCccC
Q 039692 79 LTG-----------LSGTGIVVNVT--V----AVVVAVSRSNGELVWSTQIDPR-PRSQITMSGSVYMGAFYVGLSSLEE 140 (417)
Q Consensus 79 ~~~-----------~~p~~~v~~~~--v----~~l~ald~~tG~~~W~~~~~~~-~~~~~~~sp~v~~~~v~v~~~~~~~ 140 (417)
... ..|. +.++. + +.|+|||++||+++|+++.... ....+.++|++.++.||++..+.+.
T Consensus 97 ~~~~~~~~~~~~~~~~~~--~~~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~~~v~vg~~~~~~ 174 (668)
T 1kv9_A 97 AKVKARTSCCDAVNRGVA--LWGDKVYVGTLDGRLIALDAKTGKAIWSQQTTDPAKPYSITGAPRVVKGKVIIGNGGAEY 174 (668)
T ss_dssp CGGGGGGCTTCSCCCCCE--EEBTEEEEECTTSEEEEEETTTCCEEEEEECSCTTSSCBCCSCCEEETTEEEECCBCTTT
T ss_pred CccccccccccCCccceE--EECCEEEEEcCCCEEEEEECCCCCEeeeeccCCCCCcceecCCCEEECCEEEEeCCCCCc
Confidence 321 1122 33332 2 8999999999999999997432 2344678899999999998765332
Q ss_pred ccccCcccCCCceEEEEeCCCCceeceeeecCCCCCCC----------CCC---------CCccccCCCceeecccCccc
Q 039692 141 ALPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNGGKR----------GGY---------SGAAVWGSSPAIDVIRRQKQ 201 (417)
Q Consensus 141 ~~~~~~~~~~~g~l~ald~~tG~~~W~~~~~~~~~~~~----------~~~---------~gg~~~~~~pa~d~~~~~~~ 201 (417)
. .++.|+|||++||+++|+++..+...... ..+ .++..|. .+++|++.+..+
T Consensus 175 ~--------~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~-~~a~d~~~~~vy 245 (668)
T 1kv9_A 175 G--------VRGFVSAYDADTGKLAWRFYTVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWD-SMAYDPELDLLY 245 (668)
T ss_dssp C--------CBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCS-CEEEETTTTEEE
T ss_pred C--------CCCEEEEEECCCCcEEEEecccCCCCCccccccccccccccCCccceeeeCCCCcccc-ceEEcCCCCEEE
Confidence 1 25899999999999999998743211100 001 3456775 478888766422
Q ss_pred CCC-CCCCC-------CCCCcccCCCCCCeEEEEECCCCceEEEecCCCCcceeeeccCCCCCCCCCCCCCCCccCCCce
Q 039692 202 NNQ-TTKPT-------HPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPM 273 (417)
Q Consensus 202 ~~~-~~~p~-------~~~~~v~~~~~~~~l~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~p~ 273 (417)
... ...|. ...+.+ +.+.|+|||++||+++|+++..+++.|.+. ..+.++
T Consensus 246 ~~~~~g~~w~~~~~~~~~gd~l----~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~------------------~~~~~~ 303 (668)
T 1kv9_A 246 VGTGNGSPWNREVRSPGGGDNL----YLSSILAIRPDTGKLAWHYQVTPGDSWDFT------------------ATQQIT 303 (668)
T ss_dssp EECCCEESSCHHHHSTTCCCCT----TTTEEEEECTTTCCEEEEEESSTTCCSCCC------------------CCSCEE
T ss_pred EeCCCCCccccCCCCCCCCCce----eeeeEEEEcCCCCceeeEeecCCCcccccc------------------CCCCcE
Confidence 110 00010 111122 235799999999999999999888777442 335678
Q ss_pred EEEEecCCeeeeEEEEEcccceEEEEECCCCcEEEEeecCCC------------------------------CCCCccee
Q 039692 274 LLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDIIWFKLAGPG------------------------------GREGGGVW 323 (417)
Q Consensus 274 v~~~~~~G~~~~~v~~~~~~G~l~ald~~tG~~lW~~~~~~~------------------------------~~~g~~~~ 323 (417)
+.++..+|+..++|++++++|.||+||++||+++|..+..+. ...|...+
T Consensus 304 ~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~p~~~G~~~w 383 (668)
T 1kv9_A 304 LAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKVDLATGRPVEAPGVRYEKEPIVMWPSPFGAHNW 383 (668)
T ss_dssp EEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEEECTTTCCEEECTTTTCSSSCEEESSCTTCSSCS
T ss_pred EEEeccCCcEEEEEEEECCCCEEEEEECCCCCEeccccccccccccccccccCCccccccccccCCeeEECCCCccccCC
Confidence 888888887777899999999999999999999976554320 00111111
Q ss_pred c-cc----------------------------------------------c-cCCeEEEEeccCCceeeeecCCCCCCCc
Q 039692 324 G-AA----------------------------------------------T-DGRRVYTNIVNNDRIIWSTADPSNETAH 355 (417)
Q Consensus 324 ~-~~----------------------------------------------~-~~~~vy~~~~~~~~~~W~~~~~~~~~~~ 355 (417)
. ++ . .++.|++.|..+++++|+.+... ....
T Consensus 384 ~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~~~~g~l~A~D~~tG~~~W~~~~~~-~~~~ 462 (668)
T 1kv9_A 384 HSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAAVVSGALLAWDPVKQKAAWKVPYPT-HWNG 462 (668)
T ss_dssp SCCEEETTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGGGCEEEEEEEETTTTEEEEEEEESS-SCCC
T ss_pred CcceECCCCCEEEEeccccceEeeeeccccccccccccCccccccCCCCCCCccceEEEEeCCCCcEEEEccCCC-CCcC
Confidence 0 00 0 12678888999999999998753 4556
Q ss_pred cceeeeCCeEEeccCCCC--------CCeec---------ccccc--cCCeEEEe--cCeeeeccCCCCC------CCCC
Q 039692 356 GPVTVVNGVLFAGSVSAN--------GSTVY---------GGVPA--SYGCIYLG--NGYTVSLGKFHPT------WTPG 408 (417)
Q Consensus 356 ~p~~~~~~~v~~~~~~g~--------g~~~~---------~sp~~--~~g~lyv~--~~~~~~~~~~~~~------~~~~ 408 (417)
+++++++++||+++.+|. |..+| ++|+. .||++||. +|.+......||+ ...+
T Consensus 463 ~~~~t~gg~vf~g~~dg~l~a~d~~tG~~l~~~~~~~~~~~~p~~~~~~G~~yva~~~G~g~~~~~~~~~~~~~~~~~~~ 542 (668)
T 1kv9_A 463 GTLSTAGNLVFQGTAAGQMHAYSADKGEALWQFEAQSGIVAAPMTFELAGRQYVAIMAGWGGVATLTGGESMNLPGMKNR 542 (668)
T ss_dssp CEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEEEEECCCSHHHHHCCGGGGSTTCCCC
T ss_pred ceeEeCCCEEEEECCcccchhhhhhcChhheEecCCCCcccCceEEEECCEEEEEEEecCCCccccccccccccccCCCC
Confidence 778799999999988776 44443 67775 59999994 4433332333333 3568
Q ss_pred CEEEEEEe
Q 039692 409 TSLYAFCT 416 (417)
Q Consensus 409 ~~~~~~~~ 416 (417)
+.|+.|.+
T Consensus 543 ~~i~~~~l 550 (668)
T 1kv9_A 543 SRLLVFAL 550 (668)
T ss_dssp CEEEEEEE
T ss_pred CeEEEEEc
Confidence 89999876
No 6
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=100.00 E-value=6.3e-39 Score=339.61 Aligned_cols=381 Identities=23% Similarity=0.381 Sum_probs=276.0
Q ss_pred CCCCCCCCCCCccccCCcccCccccccceeeeEEEeCCc--eeeCcEEECCEEEEeccCCcEEEEECCCCccceEeeccc
Q 039692 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAGKD--ISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSK 78 (417)
Q Consensus 1 Wp~~~~~~~~~~~~~~~~~i~~~~~~~~~~~W~~~~~~~--~~~~p~~~~g~v~v~~~~g~l~ald~~tG~~~W~~~~~~ 78 (417)
||+|++++.+++|++..+ |++.|+.+++++|++.++.. +.++|++.+++||+++.++.|+|||++||+++|+++...
T Consensus 29 W~~~~~~~~~~~~s~l~~-i~~~n~~~~~~~W~~~~~~~~g~~~~P~v~~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~ 107 (677)
T 1kb0_A 29 WPTIGVDYAETRYSRLDQ-INAANVKDLGLAWSYNLESTRGVEATPVVVDGIMYVSASWSVVHAIDTRTGNRIWTYDPQI 107 (677)
T ss_dssp BCSTTSSTTCCCEECCCS-SCTTTGGGEEEEEEEECCCCSCCCCCCEEETTEEEEECGGGCEEEEETTTTEEEEEECCCC
T ss_pred ccccCCCCCCCccCcccc-CCcccccCccEEEEEECCCCCCceeCCEEECCEEEEECCCCeEEEEECCCCcEEEEEcCCC
Confidence 999999999999999987 99999999999999999864 679999999999999999999999999999999999874
Q ss_pred ccC-----------CcceeeEEeee--e----eEEEEEecCCCceeeeeecC-C-CCCcceeeceeEEcCeEEEEeCCcc
Q 039692 79 LTG-----------LSGTGIVVNVT--V----AVVVAVSRSNGELVWSTQID-P-RPRSQITMSGSVYMGAFYVGLSSLE 139 (417)
Q Consensus 79 ~~~-----------~~p~~~v~~~~--v----~~l~ald~~tG~~~W~~~~~-~-~~~~~~~~sp~v~~~~v~v~~~~~~ 139 (417)
... ..+. +.++. + +.|+|||++||+++|+++.. . .....+.++|++.++.||++....+
T Consensus 108 ~~~~~~~~~~~~~~~~~a--~~~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~~p~v~~~~v~v~~~~~~ 185 (677)
T 1kb0_A 108 DRSTGFKGCCDVVNRGVA--LWKGKVYVGAWDGRLIALDAATGKEVWHQNTFEGQKGSLTITGAPRVFKGKVIIGNGGAE 185 (677)
T ss_dssp CGGGGGGSSSCSCCCCCE--EETTEEEEECTTSEEEEEETTTCCEEEEEETTTTCCSSCBCCSCCEEETTEEEECCBCTT
T ss_pred CccccccccccCCCCCce--EECCEEEEEcCCCEEEEEECCCCCEEeeecCCcCcCcCcccccCcEEECCEEEEEecccc
Confidence 321 1122 33332 2 89999999999999999975 2 2223477899999999999886433
Q ss_pred CccccCcccCCCceEEEEeCCCCceeceeeecCCCCCCC----------------CC----CCCccccCCCceeecccCc
Q 039692 140 EALPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNGGKR----------------GG----YSGAAVWGSSPAIDVIRRQ 199 (417)
Q Consensus 140 ~~~~~~~~~~~~g~l~ald~~tG~~~W~~~~~~~~~~~~----------------~~----~~gg~~~~~~pa~d~~~~~ 199 (417)
.. .++.|+|||++||+++|+++..+.....+ +. ..|+..|. .+++|++.+.
T Consensus 186 ~~--------~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~-~~~~d~~~~~ 256 (677)
T 1kb0_A 186 YG--------VRGYITAYDAETGERKWRWFSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWD-SMTFDAELNT 256 (677)
T ss_dssp TC--------CBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCS-CEEEETTTTE
T ss_pred cC--------CCCEEEEEECCCCcEEEEeccCCCCccccccccccccccccccccCceeEeCCCccccc-ceeEcCCCCE
Confidence 21 25899999999999999998854321000 00 03455664 4788887664
Q ss_pred ccCCC-CCC-------CCCCCCcccCCCCCCeEEEEECCCCceEEEecCCCCcceeeeccCCCCCCCCCCCCCCCccCCC
Q 039692 200 KQNNQ-TTK-------PTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEA 271 (417)
Q Consensus 200 ~~~~~-~~~-------p~~~~~~v~~~~~~~~l~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~ 271 (417)
.+... ... +....+.+ +.+.|+|||++||+++|+++..+++.|.+ +..++
T Consensus 257 vy~~~~~~~~w~~~~~~~~~gd~~----~~~sv~AlD~~TG~~~W~~~~~~~d~wd~------------------~~~~~ 314 (677)
T 1kb0_A 257 MYVGTGNGSPWSHKVRSPKGGDNL----YLASIVALDPDTGKYKWHYQETPGDNWDY------------------TSTQP 314 (677)
T ss_dssp EEEECCCEESSCHHHHSTTCCCCT----TTTEEEEECTTTCCEEEEEESSTTCCSCC------------------CCCSC
T ss_pred EEEECCCCccccCCCCCccCCCCe----eeEEEEEEECCCCCEEEEEecCCCccccc------------------ccCCC
Confidence 22111 000 10112222 23579999999999999999988877743 44578
Q ss_pred ceEEEEecCCeeeeEEEEEcccceEEEEECCCCcEEEEeecCCCC-----------------------------CCCcce
Q 039692 272 PMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDIIWFKLAGPGG-----------------------------REGGGV 322 (417)
Q Consensus 272 p~v~~~~~~G~~~~~v~~~~~~G~l~ald~~tG~~lW~~~~~~~~-----------------------------~~g~~~ 322 (417)
|++.+...+|+..++|++++++|.||+||++||+++|+.+..+.. ..|...
T Consensus 315 p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~ 394 (677)
T 1kb0_A 315 MILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHN 394 (677)
T ss_dssp CEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSC
T ss_pred cEEEecccCCcEeeEEEEECCCCEEEEEECCCCCEeccccccccCcccccCCCCceeeccccCcCCCccEECcCcccccC
Confidence 999988888876789999999999999999999999998864311 112222
Q ss_pred ec-cccc--C----------------------------------------------------CeEEEEeccCCceeeeec
Q 039692 323 WG-AATD--G----------------------------------------------------RRVYTNIVNNDRIIWSTA 347 (417)
Q Consensus 323 ~~-~~~~--~----------------------------------------------------~~vy~~~~~~~~~~W~~~ 347 (417)
+. ++++ . +.|++.|..+++++|+.+
T Consensus 395 w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~ 474 (677)
T 1kb0_A 395 WHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKAAWSVE 474 (677)
T ss_dssp SSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEEEEEEE
T ss_pred CCCceEcCCCCEEEEeChhcceeeecccccccccccccccccccccccccccccccCCCCCccEEEEEeCCCCcEEeecC
Confidence 21 2221 2 456666777889999998
Q ss_pred CCCCCCCccceeeeCCeEEeccCCCC--------CCee---------cccccc--cCCeEEEec--Ceeeecc--CCCCC
Q 039692 348 DPSNETAHGPVTVVNGVLFAGSVSAN--------GSTV---------YGGVPA--SYGCIYLGN--GYTVSLG--KFHPT 404 (417)
Q Consensus 348 ~~~~~~~~~p~~~~~~~v~~~~~~g~--------g~~~---------~~sp~~--~~g~lyv~~--~~~~~~~--~~~~~ 404 (417)
... ...+.++..++++||+++.+|. |+.. .++|+. .||++|+.. |++..+. .....
T Consensus 475 ~~~-~~~~g~~~~~g~~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~~y~~~G~~~v~~~~G~~~~~~~~~~~~~ 553 (677)
T 1kb0_A 475 HVS-PWNGGTLTTAGNVVFQGTADGRLVAYHAATGEKLWEAPTGTGVVAAPSTYMVDGRQYVSVAVGWGGVYGLAARATE 553 (677)
T ss_dssp ESS-SCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEEEEECCCHHHHHHCCSCS
T ss_pred CCC-CCcCcceEeCCCEEEEECCCCcEEEEECCCCceeeeeeCCCCcccCCEEEEeCCEEEEEEeccCCccccccccccc
Confidence 653 4567788788999999988876 4443 367888 699999854 5333111 00112
Q ss_pred CCCCCEEEEEEe
Q 039692 405 WTPGTSLYAFCT 416 (417)
Q Consensus 405 ~~~~~~~~~~~~ 416 (417)
-..++.|+.|.|
T Consensus 554 ~~~~~~l~~f~l 565 (677)
T 1kb0_A 554 RQGPGTVYTFVV 565 (677)
T ss_dssp CCCCCEEEEEEE
T ss_pred cCCCCeEEEEec
Confidence 244899999986
No 7
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=100.00 E-value=1.7e-33 Score=276.65 Aligned_cols=313 Identities=22% Similarity=0.316 Sum_probs=222.7
Q ss_pred CCCCCCCCCccccCCcccCccccccceeeeEEEeCCce-----eeCcEEECCEEEEeccCCcEEEEECCCCccceEeecc
Q 039692 3 NHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAGKDI-----SATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLS 77 (417)
Q Consensus 3 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~W~~~~~~~~-----~~~p~~~~g~v~v~~~~g~l~ald~~tG~~~W~~~~~ 77 (417)
+|+++...++++|..+ +... .+++++|++.++... .++|++.+++||+++.++.|+|||++||+++|++++.
T Consensus 6 ~~~~~~~~~~~s~l~~-~~~~--~~~~~~W~~~~~~~~~~~~~~~~p~v~~~~v~~~~~~g~v~a~d~~tG~~~W~~~~~ 82 (376)
T 3q7m_A 6 LFNSEEDVVKMSPLPT-VENQ--FTPTTAWSTSVGSGIGNFYSNLHPALADNVVYAADRAGLVKALNADDGKEIWSVSLA 82 (376)
T ss_dssp --------CCCCCCCC-CCCS--SCCEEEEEECCTTTTTTSCCCCCCEEETTEEEEECTTSEEEEEETTTCCEEEEEECC
T ss_pred cccCCCCCCCCCchhh-cCCC--CcceEEeEEecCCCccccceeeccEEECCEEEEEcCCCeEEEEEccCCceeeeecCc
Confidence 4677788889999887 6654 679999999998542 4689999999999999999999999999999999985
Q ss_pred cc----------cCCcceeeEEeee--e----eEEEEEecCCCceeeeeecCCCCCcceeeceeEEcCeEEEEeCCccCc
Q 039692 78 KL----------TGLSGTGIVVNVT--V----AVVVAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEA 141 (417)
Q Consensus 78 ~~----------~~~~p~~~v~~~~--v----~~l~ald~~tG~~~W~~~~~~~~~~~~~~sp~v~~~~v~v~~~~~~~~ 141 (417)
.. +...|. +.++. + +.|+|||++||+++|+++.... +.++|++.++.||++..
T Consensus 83 ~~~~~~~~~~~~~~~~~~--~~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~~----~~~~p~~~~~~v~v~~~----- 151 (376)
T 3q7m_A 83 EKDGWFSKEPALLSGGVT--VSGGHVYIGSEKAQVYALNTSDGTVAWQTKVAGE----ALSRPVVSDGLVLIHTS----- 151 (376)
T ss_dssp C---CCSCCCCCEEEEEE--EETTEEEEEETTSEEEEEETTTCCEEEEEECSSC----CCSCCEEETTEEEEECT-----
T ss_pred cccccccccCcccccCce--EeCCEEEEEcCCCEEEEEECCCCCEEEEEeCCCc----eEcCCEEECCEEEEEcC-----
Confidence 32 111222 33332 2 7999999999999999997643 56678899999999886
Q ss_pred cccCcccCCCceEEEEeCCCCceeceeeecCCCCCCCCCCCCccccCCCceeecccCcccCCCCCCCCCCCCcccCCCCC
Q 039692 142 LPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYSGAAVWGSSPAIDVIRRQKQNNQTTKPTHPDQCISSDIYA 221 (417)
Q Consensus 142 ~~~~~~~~~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~~gg~~~~~~pa~d~~~~~~~~~~~~~p~~~~~~v~~~~~~ 221 (417)
++.|+|||++||+++|+++......... ....|.+.++.++.+..+
T Consensus 152 ---------~g~l~~~d~~tG~~~W~~~~~~~~~~~~-------------------------~~~~~~~~~~~v~~g~~~ 197 (376)
T 3q7m_A 152 ---------NGQLQALNEADGAVKWTVNLDMPSLSLR-------------------------GESAPTTAFGAAVVGGDN 197 (376)
T ss_dssp ---------TSEEEEEETTTCCEEEEEECCC-----C-------------------------CCCCCEEETTEEEECCTT
T ss_pred ---------CCeEEEEECCCCcEEEEEeCCCCceeec-------------------------CCCCcEEECCEEEEEcCC
Confidence 4899999999999999988742211000 011233334556677778
Q ss_pred CeEEEEECCCCceEEEecCCCCcce-eeeccCCCCCCCCCCCCCCCccCCCceEEEEecCCeeeeEEEEEcccceEEEEE
Q 039692 222 NSIVALDIDSGRIAWAKPLGGYDIF-YFTCLVPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFD 300 (417)
Q Consensus 222 ~~l~ald~~tG~~~W~~~~~~~~~~-~~~~~~~~~~~c~~~~~~~~~~~~~p~v~~~~~~G~~~~~v~~~~~~G~l~ald 300 (417)
+.|+++|++||+++|+++....... ... .-.+....|++. ++.||+++.+|.++++|
T Consensus 198 g~l~~~d~~tG~~~w~~~~~~~~~~~~~~--------------~~~~~~~~p~~~--------~~~v~~~~~~g~l~~~d 255 (376)
T 3q7m_A 198 GRVSAVLMEQGQMIWQQRISQATGSTEID--------------RLSDVDTTPVVV--------NGVVFALAYNGNLTALD 255 (376)
T ss_dssp TEEEEEETTTCCEEEEEECCC-------------------------CCCCCCEEE--------TTEEEEECTTSCEEEEE
T ss_pred CEEEEEECCCCcEEEEEecccCCCCcccc--------------cccccCCCcEEE--------CCEEEEEecCcEEEEEE
Confidence 9999999999999999986532100 000 000133577776 57899999999999999
Q ss_pred CCCCcEEEEeecCCCCCCCcceecccccC---------CeEEEEeccCCceeeeecCCCCCCCccceeeeCCeEEeccCC
Q 039692 301 RDSGDIIWFKLAGPGGREGGGVWGAATDG---------RRVYTNIVNNDRIIWSTADPSNETAHGPVTVVNGVLFAGSVS 371 (417)
Q Consensus 301 ~~tG~~lW~~~~~~~~~~g~~~~~~~~~~---------~~vy~~~~~~~~~~W~~~~~~~~~~~~p~~~~~~~v~~~~~~ 371 (417)
+++|+++|+...+. ...++.++ +.|++.+.++++++|+.+........+|+ +.++.||+++.+
T Consensus 256 ~~tG~~~w~~~~~~-------~~~~~~~~~~l~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~-~~~~~l~v~~~~ 327 (376)
T 3q7m_A 256 LRSGQIMWKRELGS-------VNDFIVDGNRIYLVDQNDRVMALTIDGGVTLWTQSDLLHRLLTSPV-LYNGNLVVGDSE 327 (376)
T ss_dssp TTTCCEEEEECCCC-------EEEEEEETTEEEEEETTCCEEEEETTTCCEEEEECTTTTSCCCCCE-EETTEEEEECTT
T ss_pred CCCCcEEeeccCCC-------CCCceEECCEEEEEcCCCeEEEEECCCCcEEEeecccCCCcccCCE-EECCEEEEEeCC
Confidence 99999999988631 12233344 45555666778999999844335566776 778999999988
Q ss_pred CC--------CC----------eecccccccCCeEEEecC
Q 039692 372 AN--------GS----------TVYGGVPASYGCIYLGNG 393 (417)
Q Consensus 372 g~--------g~----------~~~~sp~~~~g~lyv~~~ 393 (417)
|. |. ...++|++.+++||+++.
T Consensus 328 g~l~~~d~~tG~~~~~~~~~~~~~~~~~~~~~~~l~v~~~ 367 (376)
T 3q7m_A 328 GYLHWINVEDGRFVAQQKVDSSGFQTEPVAADGKLLIQAK 367 (376)
T ss_dssp SEEEEEETTTCCEEEEEECCTTCBCSCCEEETTEEEEEBT
T ss_pred CeEEEEECCCCcEEEEEecCCCcceeCCEEECCEEEEEeC
Confidence 75 33 344788999999999765
No 8
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=99.97 E-value=2.1e-29 Score=247.35 Aligned_cols=284 Identities=20% Similarity=0.310 Sum_probs=207.0
Q ss_pred ccCccccccceeeeEEEeC----------CceeeCcEEECCEEEEeccCCcEEEEECCCCccceEeecccccCCcceeeE
Q 039692 19 LINPVTVRNLRLRWSFYAG----------KDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTGLSGTGIV 88 (417)
Q Consensus 19 ~i~~~~~~~~~~~W~~~~~----------~~~~~~p~~~~g~v~v~~~~g~l~ald~~tG~~~W~~~~~~~~~~~p~~~v 88 (417)
.|.+.+..+++++|++.++ ..+.+.|++.+++||+++.++.|+|||++||+++|++++......+|. +
T Consensus 64 ~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~~~~~~p~--~ 141 (376)
T 3q7m_A 64 LVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVSGGHVYIGSEKAQVYALNTSDGTVAWQTKVAGEALSRPV--V 141 (376)
T ss_dssp EEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEEETTEEEEEETTSEEEEEETTTCCEEEEEECSSCCCSCCE--E
T ss_pred eEEEEEccCCceeeeecCccccccccccCcccccCceEeCCEEEEEcCCCEEEEEECCCCCEEEEEeCCCceEcCCE--E
Confidence 4778888999999999994 446788999999999999999999999999999999999876666665 4
Q ss_pred Eeeee------eEEEEEecCCCceeeeeecCCCCC-cceeeceeEEcCeEEEEeCCccCccccCcccCCCceEEEEeCCC
Q 039692 89 VNVTV------AVVVAVSRSNGELVWSTQIDPRPR-SQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRN 161 (417)
Q Consensus 89 ~~~~v------~~l~ald~~tG~~~W~~~~~~~~~-~~~~~sp~v~~~~v~v~~~~~~~~~~~~~~~~~~g~l~ald~~t 161 (417)
.++.+ +.|+|||++||+++|+++...... ....++|++.++.||++.. ++.|+++|++|
T Consensus 142 ~~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~v~~g~~--------------~g~l~~~d~~t 207 (376)
T 3q7m_A 142 SDGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTTAFGAAVVGGD--------------NGRVSAVLMEQ 207 (376)
T ss_dssp ETTEEEEECTTSEEEEEETTTCCEEEEEECCC-----CCCCCCEEETTEEEECCT--------------TTEEEEEETTT
T ss_pred ECCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEEECCEEEEEcC--------------CCEEEEEECCC
Confidence 44422 889999999999999999754321 1124678889999999876 48999999999
Q ss_pred CceeceeeecCCCCCCCCCCCCccccCCCceeecccCcccCCCCCCCCCCCCcccCCCCCCeEEEEECCCCceEEEecCC
Q 039692 162 GRIIWQTYMLPDNGGKRGGYSGAAVWGSSPAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLG 241 (417)
Q Consensus 162 G~~~W~~~~~~~~~~~~~~~~gg~~~~~~pa~d~~~~~~~~~~~~~p~~~~~~v~~~~~~~~l~ald~~tG~~~W~~~~~ 241 (417)
|+++|+++....... . +.++ ..+....|.+.++.++....++.++|+|+++|+++|+++..
T Consensus 208 G~~~w~~~~~~~~~~--------~--------~~~~---~~~~~~~p~~~~~~v~~~~~~g~l~~~d~~tG~~~w~~~~~ 268 (376)
T 3q7m_A 208 GQMIWQQRISQATGS--------T--------EIDR---LSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQIMWKRELG 268 (376)
T ss_dssp CCEEEEEECCC------------------------------CCCCCCEEETTEEEEECTTSCEEEEETTTCCEEEEECCC
T ss_pred CcEEEEEecccCCCC--------c--------cccc---ccccCCCcEEECCEEEEEecCcEEEEEECCCCcEEeeccCC
Confidence 999999886321000 0 0000 00112344445566777778899999999999999998754
Q ss_pred CCcceeeeccCCCCCCCCCCCCCCCccCCCceEEEEecCCeeeeEEEEEcccceEEEEECCCCcEEEEeecCCCCCCC--
Q 039692 242 GYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDIIWFKLAGPGGREG-- 319 (417)
Q Consensus 242 ~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~p~v~~~~~~G~~~~~v~~~~~~G~l~ald~~tG~~lW~~~~~~~~~~g-- 319 (417)
.. ..|++. ++.||+++.+|.|+|||+++|+++|+.+........
T Consensus 269 ~~--------------------------~~~~~~--------~~~l~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~ 314 (376)
T 3q7m_A 269 SV--------------------------NDFIVD--------GNRIYLVDQNDRVMALTIDGGVTLWTQSDLLHRLLTSP 314 (376)
T ss_dssp CE--------------------------EEEEEE--------TTEEEEEETTCCEEEEETTTCCEEEEECTTTTSCCCCC
T ss_pred CC--------------------------CCceEE--------CCEEEEEcCCCeEEEEECCCCcEEEeecccCCCcccCC
Confidence 31 234444 568999999999999999999999998732110000
Q ss_pred ---cceecccccCCeEEEEeccCCceeeeecCCCCCCCccceeeeCCeEEeccCCC
Q 039692 320 ---GGVWGAATDGRRVYTNIVNNDRIIWSTADPSNETAHGPVTVVNGVLFAGSVSA 372 (417)
Q Consensus 320 ---~~~~~~~~~~~~vy~~~~~~~~~~W~~~~~~~~~~~~p~~~~~~~v~~~~~~g 372 (417)
.....+...++.||+.+.++++++|+.+.......+.|+ +.++.||+++.+|
T Consensus 315 ~~~~~~l~v~~~~g~l~~~d~~tG~~~~~~~~~~~~~~~~~~-~~~~~l~v~~~~G 369 (376)
T 3q7m_A 315 VLYNGNLVVGDSEGYLHWINVEDGRFVAQQKVDSSGFQTEPV-AADGKLLIQAKDG 369 (376)
T ss_dssp EEETTEEEEECTTSEEEEEETTTCCEEEEEECCTTCBCSCCE-EETTEEEEEBTTS
T ss_pred EEECCEEEEEeCCCeEEEEECCCCcEEEEEecCCCcceeCCE-EECCEEEEEeCCC
Confidence 001112223456777788889999999875445566676 7789999998765
No 9
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=99.95 E-value=6.6e-26 Score=235.61 Aligned_cols=338 Identities=14% Similarity=0.128 Sum_probs=204.5
Q ss_pred ccCcccc-ccceeeeEEEeCCc-----------eeeCcEE--ECCE----EEEeccCCcEEEEECCCCccceEeeccc--
Q 039692 19 LINPVTV-RNLRLRWSFYAGKD-----------ISATPAV--ANGV----VYFPSWNGYLYAVNAFNGALIWEQNLSK-- 78 (417)
Q Consensus 19 ~i~~~~~-~~~~~~W~~~~~~~-----------~~~~p~~--~~g~----v~v~~~~g~l~ald~~tG~~~W~~~~~~-- 78 (417)
.|.+.++ .+++++|++.+... +...|++ .+++ ||+++.++.|+|||++||+++|++++..
T Consensus 74 ~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~dg~l~AlDa~TG~~~W~~~~~~~~ 153 (599)
T 1w6s_A 74 NTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQLDGNVAALNAETGETVWKVENSDIK 153 (599)
T ss_dssp CEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECTTSEEEEEETTTCCEEEEEECCCGG
T ss_pred EEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcCCCEEEEEECCCCCEEEeecCCCCC
Confidence 4788888 89999999998753 2356788 7888 9999999999999999999999999875
Q ss_pred ---ccCCcceeeEEeee------------eeEEEEEecCCCceeeeeecCCCCC--------------------------
Q 039692 79 ---LTGLSGTGIVVNVT------------VAVVVAVSRSNGELVWSTQIDPRPR-------------------------- 117 (417)
Q Consensus 79 ---~~~~~p~~~v~~~~------------v~~l~ald~~tG~~~W~~~~~~~~~-------------------------- 117 (417)
.+.++|. +.++. .+.|+|||++||+++|+++......
T Consensus 154 ~~~~~~ssP~--v~~g~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~~~~~~~~~~~p~~~~~~~~~g~~~~g~~tw~ 231 (599)
T 1w6s_A 154 VGSTLTIAPY--VVKDKVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYATGPDKDLLLASDFNIKNPHYGQKGLGTGTWE 231 (599)
T ss_dssp GTCBCCSCCE--EETTEEEECCBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCTTHHHHTSS
T ss_pred ccceeecCCE--EECCEEEEEecccccCCCCeEEEEECCCCcEEEEEcCCCCccccccccccccccccccccccccccCC
Confidence 3445565 33331 2689999999999999999653210
Q ss_pred --------cceeeceeE--EcCeEEEEeCCccC--ccccCcccCCCceEEEEeCCCCceeceeeecCCCCCCCCCCCCcc
Q 039692 118 --------SQITMSGSV--YMGAFYVGLSSLEE--ALPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYSGAA 185 (417)
Q Consensus 118 --------~~~~~sp~v--~~~~v~v~~~~~~~--~~~~~~~~~~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~~gg~ 185 (417)
.....++++ ..+.||+++.+... ...+.....+...|+|||++||+++|+++..+........
T Consensus 232 g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~W~~q~~~~d~wd~d~----- 306 (599)
T 1w6s_A 232 GDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTGEAKFGYQKTPHDEWDYAG----- 306 (599)
T ss_dssp TTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEEEESSTTCSSCCCC-----
T ss_pred CcceecCCCccccceeEeCCCCEEEEeCCCCccccCcccCCCccccceEEEEeCCCCceeeEeecCCCccccccC-----
Confidence 001123444 36789999875310 0001111223468999999999999999986543211100
Q ss_pred ccCCCceeecccCcccCCCCCCCCCCCCcccCCCCCCeEEEEECCCCceEEEecCCCCcceeeecc-CC-----------
Q 039692 186 VWGSSPAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCL-VP----------- 253 (417)
Q Consensus 186 ~~~~~pa~d~~~~~~~~~~~~~p~~~~~~v~~~~~~~~l~ald~~tG~~~W~~~~~~~~~~~~~~~-~~----------- 253 (417)
.+.|++-.... ..+.+ ...++....++.+++||++||+++|+++..+...|.-.-. ..
T Consensus 307 --~~~p~l~d~~~-----~~G~~---~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~ 376 (599)
T 1w6s_A 307 --VNVMMLSEQKD-----KDGKA---RKLLTHPDRNGIVYTLDRTDGALVSANKLDDTVNVFKSVDLKTGQPVRDPEYGT 376 (599)
T ss_dssp --CCCCEEEEEEC-----TTSCE---EEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCCEEECGGGCC
T ss_pred --CCccEEEeccc-----cCCcE---EEEEEEECCCcEEEEEECCCCCEeecccccCCcccccccccCCCceeeccccCC
Confidence 01233211000 00000 0123445678999999999999999998764222211000 00
Q ss_pred -----CCCCCCCCCC------CCCccCCCceEEE-------Ee------cCCe----eeeEEEEE--c------ccceEE
Q 039692 254 -----NNPDCPPGPN------LDADFGEAPMLLT-------IS------TNGR----FRDVVVAV--Q------KSGFAW 297 (417)
Q Consensus 254 -----~~~~c~~~~~------~~~~~~~~p~v~~-------~~------~~G~----~~~~v~~~--~------~~G~l~ 297 (417)
....|+.... ..++-...-+++. .+ ..|+ .+..++.. + ..|.|+
T Consensus 377 ~~~~~~~~~~P~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~p~~~~~~~~~~G~l~ 456 (599)
T 1w6s_A 377 RMDHLAKDICPSAMGYHNQGHDSYDPKRELFFMGINHICMDWEPFMLPYKAGQFFVGATLNMYPGPKGDRQNYEGLGQIK 456 (599)
T ss_dssp CTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSBTTTTBCCEEEE
T ss_pred CCCCCccEeccCcccccCCCCccCCCCCCEEEEeccccceeeecccccccCCcceecccceeccCCcCCcccCCCcCeEE
Confidence 0011321100 0000000000000 00 0110 01113331 1 458999
Q ss_pred EEECCCCcEEEEeecCCCCCCC------cceecccccCCeEEEEeccCCceeeeecCCCCCCCccceee-eCCeEEeccC
Q 039692 298 AFDRDSGDIIWFKLAGPGGREG------GGVWGAATDGRRVYTNIVNNDRIIWSTADPSNETAHGPVTV-VNGVLFAGSV 370 (417)
Q Consensus 298 ald~~tG~~lW~~~~~~~~~~g------~~~~~~~~~~~~vy~~~~~~~~~~W~~~~~~~~~~~~p~~~-~~~~v~~~~~ 370 (417)
|+|+.||+++|+.+.+.+...+ +.. .....++.|++.|.++++++|+.+.+. ....+|++. .++.+|+...
T Consensus 457 A~D~~tG~~~W~~~~~~~~~~g~~~tagg~v-f~gt~dg~l~A~D~~tG~~lW~~~l~~-g~~~~P~~y~~~G~qyv~~~ 534 (599)
T 1w6s_A 457 AYNAITGDYKWEKMERFAVWGGTMATAGDLV-FYGTLDGYLKARDSDTGDLLWKFKIPS-GAIGYPMTYTHKGTQYVAIY 534 (599)
T ss_dssp EECTTTCCEEEEEEESSCCCSBCEEETTTEE-EEECTTSEEEEEETTTCCEEEEEECSS-CCCSCCEEEEETTEEEEEEE
T ss_pred EEECCCCCEEeEecCCCCccCcceEecCCEE-EEECCCCeEEEEECCCCCEEEEeeCCC-CcEeccEEEEeCCEEEEEEE
Confidence 9999999999999865321111 111 123356778888899999999999874 677889863 7899999988
Q ss_pred CCCCC
Q 039692 371 SANGS 375 (417)
Q Consensus 371 ~g~g~ 375 (417)
.|.|.
T Consensus 535 ~G~g~ 539 (599)
T 1w6s_A 535 YGVGG 539 (599)
T ss_dssp ECCCT
T ss_pred ccCCc
Confidence 88744
No 10
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=99.95 E-value=1.6e-25 Score=232.72 Aligned_cols=325 Identities=15% Similarity=0.178 Sum_probs=203.3
Q ss_pred cCccccccceeeeEEEeCCce---------eeCcEEECCEEEEeccCCcEEEEECCCCccceEeeccc-----ccCCcce
Q 039692 20 INPVTVRNLRLRWSFYAGKDI---------SATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSK-----LTGLSGT 85 (417)
Q Consensus 20 i~~~~~~~~~~~W~~~~~~~~---------~~~p~~~~g~v~v~~~~g~l~ald~~tG~~~W~~~~~~-----~~~~~p~ 85 (417)
|.+.++.+++++|++.+.... ..+|++.+++||+++.++.|+|||++||+++|++++.. .+.++|+
T Consensus 80 v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~~~~~v~~~t~dg~l~AlD~~TG~~~W~~~~~~~~~~~~~~~sP~ 159 (582)
T 1flg_A 80 LFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAIYGDKVFFGTLDASVVALNKNTGKVVWKKKFADHGAGYTMTGAPT 159 (582)
T ss_dssp EEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEEETTEEEEEETTTEEEEEESSSCCEEEEEECSCGGGTCBCCSCCE
T ss_pred EEEEECCCCcEEEEEcCCCCcccccccccCCCccEEECCEEEEEeCCCEEEEEECCCCCEEeeecCCCCCcCcccccCCE
Confidence 788889999999999987542 36788999999999999999999999999999999875 2344565
Q ss_pred eeEEee------e------------eeEEEEEecCCCceeeeeecCCCC-------------------------------
Q 039692 86 GIVVNV------T------------VAVVVAVSRSNGELVWSTQIDPRP------------------------------- 116 (417)
Q Consensus 86 ~~v~~~------~------------v~~l~ald~~tG~~~W~~~~~~~~------------------------------- 116 (417)
+.++ . .+.|+|||++||+++|+.+.....
T Consensus 160 --v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~~W~~~~~~~~~~p~~~~~~~~~g~~g~~~w~~~~~~~~g~~ 237 (582)
T 1flg_A 160 --IVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEEIWMRPFVEGHMGRLNGKDSTVTGDVKAPSWPDDRNSPTGKV 237 (582)
T ss_dssp --EEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCEEEEEESSTTCEEEETTEEEEESSCTTCTTSCBCTTSTTSBC
T ss_pred --EeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCEEeecCCCccccccccCcccccccccccccCCCccccccccc
Confidence 3322 2 258999999999999998753210
Q ss_pred ------CcceeeceeEE--cCeEEEEeCCccCcc--cc--Cc------ccCCCceEEEEeCCCCceeceeeecCCCCCCC
Q 039692 117 ------RSQITMSGSVY--MGAFYVGLSSLEEAL--PA--DQ------CCTFRGSLAKLDVRNGRIIWQTYMLPDNGGKR 178 (417)
Q Consensus 117 ------~~~~~~sp~v~--~~~v~v~~~~~~~~~--~~--~~------~~~~~g~l~ald~~tG~~~W~~~~~~~~~~~~ 178 (417)
......++++. .+.||+++.+...-. .+ .. ...+.+.|+|||++||+++|+++..+......
T Consensus 238 ~~~~~gGg~~w~~~a~d~~~g~vyv~~gn~~~~~~~~r~~~gg~~~~~d~~~~~~v~AlD~~TG~~~W~~q~~~~d~wd~ 317 (582)
T 1flg_A 238 ESWSHGGGAPWQSASFDAETNTIIVGAGNPGPWNTWARTAKGGNPHDYDSLYTSGQVGVDPSSGEVKWFYQHTPNDAWDF 317 (582)
T ss_dssp GGGGGCBCCCCSCCEEETTTTEEEEEECCBSSSCGGGGSCTTSCSTTCCCTTCSEEEEECTTTCCEEEEEESSTTCCSCC
T ss_pred cccccCCccccCCceEcCCCCEEEEeCCCCCcccCcccccCCCcccccCCcccceEEEEeCCCCCEEEEEeCCCCCcccc
Confidence 00112334443 588999986421000 00 00 11234799999999999999998854321100
Q ss_pred CCCCCccccCCCceeecc---cCcccCCCCCCCCCCCCcccCCCCCCeEEEEECCCCceEEEecCCCCcceeeeccC---
Q 039692 179 GGYSGAAVWGSSPAIDVI---RRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLV--- 252 (417)
Q Consensus 179 ~~~~gg~~~~~~pa~d~~---~~~~~~~~~~~p~~~~~~v~~~~~~~~l~ald~~tG~~~W~~~~~~~~~~~~~~~~--- 252 (417)
. + .+.|.+... .+. ....++....++.|++||++||+++|+++......|.-. +.
T Consensus 318 ~---~----~~~p~l~~~~~~~G~-----------~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~-~~~~~ 378 (582)
T 1flg_A 318 S---G----NNELVLFDYKAKDGK-----------IVKATAHADRNGFFYVVDRSNGKLQNAFPFVDNITWASH-IDLKT 378 (582)
T ss_dssp C---C----CCCCEEEEEECSSSC-----------EEEEEEEECTTSEEEEEETTTCCEEEEEESSSCCCSEEE-ECTTT
T ss_pred c---C----CCCcEEEeeecCCCC-----------EEEEEEEECCCceEEEEECCCCCEecccccccCcccccc-ccccC
Confidence 0 0 012322111 000 001345567789999999999999999988652212110 00
Q ss_pred ---------------------CCCCCCCCCCCCCCccCCCceEEEEecCCeeeeEEEEE---------------------
Q 039692 253 ---------------------PNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAV--------------------- 290 (417)
Q Consensus 253 ---------------------~~~~~c~~~~~~~~~~~~~p~v~~~~~~G~~~~~v~~~--------------------- 290 (417)
.....|+....- .+. .++.++. + .+++|+.
T Consensus 379 g~p~~~~~~~~~~~~~~~~~~~~~~~~P~~~Gg-~~w--~~~a~dp----~-~g~~yv~~~~~~~~~~~~~~~~~~g~~~ 450 (582)
T 1flg_A 379 GRPVEREGQRPPLPEPGQKHGKAVEVSPPFLGG-KNW--NPMAYSQ----D-TGLFYVPANHWKEDYWTEEVSYTKGSAY 450 (582)
T ss_dssp CCEEECTTCSCCCCCTTCSSCCCEEESSCTTCS-SCS--SCCEECT----T-TCCEEEEEECEEEEEEECCCCCCTTSCC
T ss_pred CCEeEccccCCccccccccCCCceEECcCCccc-cCC--CCceECC----C-CCEEEEechhcceeeecccccccCCCce
Confidence 000012211000 000 0111100 0 1223322
Q ss_pred ------------cccceEEEEECCCCcEEEEeecCCCCCCC------cceecccccCCeEEEEeccCCceeeeecCCCCC
Q 039692 291 ------------QKSGFAWAFDRDSGDIIWFKLAGPGGREG------GGVWGAATDGRRVYTNIVNNDRIIWSTADPSNE 352 (417)
Q Consensus 291 ------------~~~G~l~ald~~tG~~lW~~~~~~~~~~g------~~~~~~~~~~~~vy~~~~~~~~~~W~~~~~~~~ 352 (417)
...|.|+|+|+.||+++|+.+.+.+...+ +.. .....++.|++.|.++++++|+.+.+. .
T Consensus 451 ~g~~~~~~p~~~~~~G~l~A~D~~tG~~~W~~~~~~~~~~g~~~tagglv-f~g~~dg~l~A~D~~tG~~lW~~~~~~-g 528 (582)
T 1flg_A 451 LGMGFRIKRMYDDHVGSLRAMDPVSGKVVWEHKEHLPLWAGVLATAGNLV-FTGTGDGYFKAFDAKSGKELWKFQTGS-G 528 (582)
T ss_dssp CCEEEEEEESCSSCSEEEEEECTTTCCEEEEEEESSCCCSCCEEETTTEE-EEECTTSEEEEEETTTCCEEEEEECSS-C
T ss_pred eccceeecCCCCCCcceEEEEECCCCCEEEEecCCCCCcccceEeCCCEE-EEECCCCcEEEEECCCCCEEEEecCCC-C
Confidence 13689999999999999999875321111 111 123346778888899999999999874 6
Q ss_pred CCccceee-eCCeEEeccCCCCCC
Q 039692 353 TAHGPVTV-VNGVLFAGSVSANGS 375 (417)
Q Consensus 353 ~~~~p~~~-~~~~v~~~~~~g~g~ 375 (417)
..++|++. .++.+|++..+|.|.
T Consensus 529 ~~a~P~~y~~~G~qYv~~~~G~gg 552 (582)
T 1flg_A 529 IVSPPITWEQDGEQYLGVTVGYGG 552 (582)
T ss_dssp CCSCCEEEEETTEEEEEEEECCCS
T ss_pred cccCceEEEECCEEEEEEEccCCC
Confidence 77888864 789999999888744
No 11
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=99.95 E-value=2.3e-25 Score=231.22 Aligned_cols=323 Identities=17% Similarity=0.161 Sum_probs=202.0
Q ss_pred ccCcccc-ccceeeeEEEeCCc-----------eeeCcEEECCEEEEeccCCcEEEEECCCCccceEeeccc-----ccC
Q 039692 19 LINPVTV-RNLRLRWSFYAGKD-----------ISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSK-----LTG 81 (417)
Q Consensus 19 ~i~~~~~-~~~~~~W~~~~~~~-----------~~~~p~~~~g~v~v~~~~g~l~ald~~tG~~~W~~~~~~-----~~~ 81 (417)
.|.+.++ .+++++|++.+... +.++|++.+++||+.+.++.|+|||++||+++|++++.. .+.
T Consensus 74 ~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~ 153 (571)
T 2ad6_A 74 NTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAYGAGQIVKKQANGHLLALDAKTGKINWEVEVCDPKVGSTLT 153 (571)
T ss_dssp CEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCC
T ss_pred EEEEEeCCCCccEEEEEcCCCCccccccccccccccccEEECCEEEEEeCCCEEEEEECCCCCEEEEecCCCCCccceec
Confidence 4788888 89999999998753 346789999999999999999999999999999999875 344
Q ss_pred CcceeeEEeee------------eeEEEEEecCCCceeeeeecCCCCC--------------------------------
Q 039692 82 LSGTGIVVNVT------------VAVVVAVSRSNGELVWSTQIDPRPR-------------------------------- 117 (417)
Q Consensus 82 ~~p~~~v~~~~------------v~~l~ald~~tG~~~W~~~~~~~~~-------------------------------- 117 (417)
++|. +.++. .+.|+|||++||+++|+++......
T Consensus 154 ~~P~--v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~p~~~~~~~~~G~~~~g~~~w~~~~~~~ 231 (571)
T 2ad6_A 154 QAPF--VAKDTVLMGCSGAELGVRGAVNAFDLKTGELKWRAFATGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKI 231 (571)
T ss_dssp SCCE--EETTEEEEECBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGG
T ss_pred cCCE--EECCEEEEEecCCccCCCCEEEEEECCCCcEEEEEccCCCccccccCcccccccccccccccccccCcccceec
Confidence 5564 33331 2589999999999999998643210
Q ss_pred --cceeeceeEE--cCeEEEEeCCccC--ccccCcccCCCceEEEEeCCCCceeceeeecCCCCCCCCCCCCccccCCCc
Q 039692 118 --SQITMSGSVY--MGAFYVGLSSLEE--ALPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYSGAAVWGSSP 191 (417)
Q Consensus 118 --~~~~~sp~v~--~~~v~v~~~~~~~--~~~~~~~~~~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~~gg~~~~~~p 191 (417)
......+++. .+.||++..+... ...+.....+.+.|+|||++||+++|+++..+....... . .+.|
T Consensus 232 gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~~v~Ald~~tG~~~W~~~~~~~d~~d~~------~-~~~p 304 (571)
T 2ad6_A 232 GGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMTIWGRDLDTGMAKWGYQKTPHDEWDFA------G-VNQM 304 (571)
T ss_dssp CCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTEEEEEETTTCCEEEEEESSTTCSSCCC------C-CCCC
T ss_pred CCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCCceeEEEEEEEecCCCcEEEEecCCCCcccccc------c-CCCC
Confidence 0001223333 4789998764210 000001111235799999999999999998543211000 0 0123
Q ss_pred eeecccCcccCCCCCCCCCCCC----cccCCCCCCeEEEEECCCCceEEEecCCCCcceeeeccC--CCC----------
Q 039692 192 AIDVIRRQKQNNQTTKPTHPDQ----CISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLV--PNN---------- 255 (417)
Q Consensus 192 a~d~~~~~~~~~~~~~p~~~~~----~v~~~~~~~~l~ald~~tG~~~W~~~~~~~~~~~~~~~~--~~~---------- 255 (417)
++.... .++ .++....++.+++||++||+++|+++..+...|.. .+. ++.
T Consensus 305 ~l~~~~-------------~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~w~~-~~d~~~g~p~~~~~~~~~ 370 (571)
T 2ad6_A 305 VLTDQP-------------VNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVDPAVNVFK-KVDLKTGTPVRDPEFATR 370 (571)
T ss_dssp EEEEEE-------------ETTEEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEE-EECTTTCSEEECGGGCCC
T ss_pred EEEecc-------------cCCcEEEEEEEeCCCcEEEEEECCCCCEEeeecccCCccccc-cccccCCceecccccCCC
Confidence 322110 011 23445667899999999999999998765322211 000 000
Q ss_pred ------CCCCCCCCCCCccCCCceEEEEecCCeeeeEEEEEc-------------------------------------c
Q 039692 256 ------PDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQ-------------------------------------K 292 (417)
Q Consensus 256 ------~~c~~~~~~~~~~~~~p~v~~~~~~G~~~~~v~~~~-------------------------------------~ 292 (417)
..|+....- .+. .++.++. + .+++|++. .
T Consensus 371 ~~~~~~~~~P~~~Gg-~~w--~~~a~dp--~---~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~ 442 (571)
T 2ad6_A 371 MDHKGTNICPSAMGF-HNQ--GVDSYDP--E---SRTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAMYPGPNGPTKKE 442 (571)
T ss_dssp TTCCEEEESSCTTCS-SCS--CBCEEET--T---TTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSTTSCC
T ss_pred CCCCceEECCCCccc-cCC--CCceECC--C---CCEEEEEchhccccccccccccccCCccccccceeccCccccCCCC
Confidence 012211000 000 1111110 0 23444432 3
Q ss_pred cceEEEEECCCCcEEEEeecCCCCCC------CcceecccccCCeEEEEeccCCceeeeecCCCCCCCccceee-eCCeE
Q 039692 293 SGFAWAFDRDSGDIIWFKLAGPGGRE------GGGVWGAATDGRRVYTNIVNNDRIIWSTADPSNETAHGPVTV-VNGVL 365 (417)
Q Consensus 293 ~G~l~ald~~tG~~lW~~~~~~~~~~------g~~~~~~~~~~~~vy~~~~~~~~~~W~~~~~~~~~~~~p~~~-~~~~v 365 (417)
+|.|+|+|++||+++|+.+.+.+... ++.. .....++.||+.+.++++++|+.+.+. ...++|++. .++.+
T Consensus 443 ~g~l~a~D~~tG~~~W~~~~~~~~~~~~~~t~gg~v-~~g~~dg~l~a~D~~tG~~lw~~~~~~-~~~~~p~~~~~~G~~ 520 (571)
T 2ad6_A 443 MGQIRAFDLTTGKAKWTKWEKFAAWGGTLYTKGGLV-WYATLDGYLKALDNKDGKELWNFKMPS-GGIGSPMTYSFKGKQ 520 (571)
T ss_dssp CEEEEEECTTTCCEEEEEEESSCCCSBCEEETTTEE-EEECTTSEEEEEETTTCCEEEEEECSS-CCCSCCEEEEETTEE
T ss_pred CCeEEEEECCCCCEEEEecCCCCccceeEEECCCEE-EEEcCCCeEEEEECCCCCEEEEEeCCC-CcEeeeEEEEECCEE
Confidence 58999999999999999987532111 1111 122355778888889999999999874 667788853 78999
Q ss_pred EeccCCCCC
Q 039692 366 FAGSVSANG 374 (417)
Q Consensus 366 ~~~~~~g~g 374 (417)
|++..+|.+
T Consensus 521 yv~~~~G~~ 529 (571)
T 2ad6_A 521 YIGSMYGVG 529 (571)
T ss_dssp EEEEEECCC
T ss_pred EEEEECCCC
Confidence 999888873
No 12
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.93 E-value=2.3e-24 Score=228.42 Aligned_cols=328 Identities=19% Similarity=0.200 Sum_probs=202.2
Q ss_pred ccCccccccceeeeEEEeCCc-----------eeeCcEEECCEEEEeccCCcEEEEECCCCccceEeecc-c-----ccC
Q 039692 19 LINPVTVRNLRLRWSFYAGKD-----------ISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLS-K-----LTG 81 (417)
Q Consensus 19 ~i~~~~~~~~~~~W~~~~~~~-----------~~~~p~~~~g~v~v~~~~g~l~ald~~tG~~~W~~~~~-~-----~~~ 81 (417)
.|.+.++.+++++|++..... +.++|++.+++||+++.++.|+|||++||+++|+++.. . .+.
T Consensus 81 ~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~~~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~~ 160 (689)
T 1yiq_A 81 VVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAVWKGKVYVGVLDGRLEAIDAKTGQRAWSVDTRADHKRSYTIT 160 (689)
T ss_dssp CEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECTTSEEEEEETTTCCEEEEEECCSCTTSCCBCC
T ss_pred eEEEEECCCCceeEEEcCCCCccccccccccCCCCccEEECCEEEEEccCCEEEEEECCCCCEeeeecCcCCCCCCcccc
Confidence 478888999999999987643 24678999999999999999999999999999999985 2 333
Q ss_pred CcceeeEEeee------------eeEEEEEecCCCceeeeeecCC-CCC--------------------------cceee
Q 039692 82 LSGTGIVVNVT------------VAVVVAVSRSNGELVWSTQIDP-RPR--------------------------SQITM 122 (417)
Q Consensus 82 ~~p~~~v~~~~------------v~~l~ald~~tG~~~W~~~~~~-~~~--------------------------~~~~~ 122 (417)
++|. +.++. .+.|+|||++||+++|+++... ... .....
T Consensus 161 ~sP~--v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~ 238 (689)
T 1yiq_A 161 GAPR--VVNGKVVIGNGGAEFGVRGYVTAYDAETGKEAWRFYTVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWD 238 (689)
T ss_dssp SCCE--EETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCS
T ss_pred CCcE--EECCEEEEEeCCCccCCCCEEEEEECCCCcEEEEecccCCCcccccccccccccccccCCceeeecCCCCcccc
Confidence 4554 33331 2689999999999999998521 110 00112
Q ss_pred ceeEE--cCeEEEEeCCccCcc-----ccCcccCCCceEEEEeCCCCceeceeeecCCCCCCCCCCCCccccCCCcee-e
Q 039692 123 SGSVY--MGAFYVGLSSLEEAL-----PADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYSGAAVWGSSPAI-D 194 (417)
Q Consensus 123 sp~v~--~~~v~v~~~~~~~~~-----~~~~~~~~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~~gg~~~~~~pa~-d 194 (417)
++++. .+.||+++.++..-. +......+.+.|+|||++||+++|+++..+....... ....+.+ |
T Consensus 239 ~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd~~-------~~~~~~l~d 311 (689)
T 1yiq_A 239 SFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWDYT-------ATQHMILAE 311 (689)
T ss_dssp CEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCCSCCC-------CCSCEEEEE
T ss_pred ceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCceeEeeecCCccccccc-------CCCCcEEEe
Confidence 34442 578999887532000 0000111224699999999999999987543211100 0011111 1
Q ss_pred cccCcccCCCCCCCCCCCCcccCCCCCCeEEEEECCCCceEEEecCCCCcceeeecc------------------CCCCC
Q 039692 195 VIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCL------------------VPNNP 256 (417)
Q Consensus 195 ~~~~~~~~~~~~~p~~~~~~v~~~~~~~~l~ald~~tG~~~W~~~~~~~~~~~~~~~------------------~~~~~ 256 (417)
.... +. ....++....++.+++||++||+++|+.+..+. .|..... .....
T Consensus 312 ~~~~-------G~---~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~-~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~ 380 (689)
T 1yiq_A 312 LPID-------GK---PRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQ-SWTKGMDMKTGRPILDEENAAYWKNGKRNL 380 (689)
T ss_dssp EEET-------TE---EEEEEEECCTTSEEEEEETTTCCEEEEEESSCC-SSEEEEETTTTEEEECHHHHCTTTSSSCEE
T ss_pred eccC-------Cc---EEEEEEEECCCCeEEEEECCCCCEecccccccc-ccccccCccCCCcccchhhccccCCCCeeE
Confidence 0000 00 001355667789999999999999999887652 2322100 00001
Q ss_pred CCCCCCCCCCccCCCceEEEEecCCeeeeEEEEEc---------------------------------------------
Q 039692 257 DCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQ--------------------------------------------- 291 (417)
Q Consensus 257 ~c~~~~~~~~~~~~~p~v~~~~~~G~~~~~v~~~~--------------------------------------------- 291 (417)
.|+....- .+. .++.++. ..+++|+++
T Consensus 381 ~~p~~~Gg-~~w--~~~a~dp-----~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~ 452 (689)
T 1yiq_A 381 VTPAFWGA-HDW--QPMSYNP-----DTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMMPEGAEGLLEMAKS 452 (689)
T ss_dssp ESSCTTCS-SCS--SCCEEET-----TTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCCCSSHHHHHHHHTT
T ss_pred eCCCcccc-cCC--CcceECC-----CCCEEEEeccccceeeeeccccccccccccccccCccccccCcccccCCCCCCC
Confidence 12211000 000 1122211 023455431
Q ss_pred ccceEEEEECCCCcEEEEeecCCCCCCCcc-----eecccccCCeEEEEeccCCceeeeecCCCCCCCccceee-eCCeE
Q 039692 292 KSGFAWAFDRDSGDIIWFKLAGPGGREGGG-----VWGAATDGRRVYTNIVNNDRIIWSTADPSNETAHGPVTV-VNGVL 365 (417)
Q Consensus 292 ~~G~l~ald~~tG~~lW~~~~~~~~~~g~~-----~~~~~~~~~~vy~~~~~~~~~~W~~~~~~~~~~~~p~~~-~~~~v 365 (417)
.+|.|+|+|++|||++|+.+.+.+...+.. .......++.|++.|.++++++|+.+.+. .....|++. .++..
T Consensus 453 ~~g~l~A~D~~tG~~~W~~~~~~~~~~g~~~tagglvf~gt~dg~l~a~D~~tG~~lw~~~~~~-~~~~~p~ty~~~G~q 531 (689)
T 1yiq_A 453 WSGKLIAWDPVKQQAAWEVPYVTIFNGGTLSTAGNLVFEGSADGRVIAYAADTGEKLWEQPAAS-GVMAAPVTYSVDGEQ 531 (689)
T ss_dssp CEEEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSS-CCCSCCEEEEETTEE
T ss_pred cceeEEEEECCCCCeEeEccCCCCccCccceECCCEEEEECCCCcEEEEECCCCccceeeeCCC-CcccCceEEEECCEE
Confidence 148899999999999999987532111110 11122356788888999999999999874 667788874 78999
Q ss_pred EeccCCCCCC
Q 039692 366 FAGSVSANGS 375 (417)
Q Consensus 366 ~~~~~~g~g~ 375 (417)
|++...|.|.
T Consensus 532 yv~~~~G~gg 541 (689)
T 1yiq_A 532 YVTFMAGWGG 541 (689)
T ss_dssp EEEEEECCCT
T ss_pred EEEEEecCCc
Confidence 9998877643
No 13
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.93 E-value=3.1e-24 Score=227.05 Aligned_cols=326 Identities=18% Similarity=0.222 Sum_probs=203.4
Q ss_pred ccCccccccceeeeEEEeCCc-----------eeeCcEEECCEEEEeccCCcEEEEECCCCccceEeecc-c-----ccC
Q 039692 19 LINPVTVRNLRLRWSFYAGKD-----------ISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLS-K-----LTG 81 (417)
Q Consensus 19 ~i~~~~~~~~~~~W~~~~~~~-----------~~~~p~~~~g~v~v~~~~g~l~ald~~tG~~~W~~~~~-~-----~~~ 81 (417)
.|.+.++.+++++|++.+... +..+|++.+++||+++.++.|+|||++||+++|+++.. . .+.
T Consensus 88 ~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~ 167 (677)
T 1kb0_A 88 VVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALWKGKVYVGAWDGRLIALDAATGKEVWHQNTFEGQKGSLTIT 167 (677)
T ss_dssp CEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEEETTEEEEECTTSEEEEEETTTCCEEEEEETTTTCCSSCBCC
T ss_pred eEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceEECCEEEEEcCCCEEEEEECCCCCEEeeecCCcCcCcCcccc
Confidence 478888999999999998753 34678899999999999999999999999999999987 2 344
Q ss_pred CcceeeEEee--e----------eeEEEEEecCCCceeeeeecCCCCC-------------------c---------cee
Q 039692 82 LSGTGIVVNV--T----------VAVVVAVSRSNGELVWSTQIDPRPR-------------------S---------QIT 121 (417)
Q Consensus 82 ~~p~~~v~~~--~----------v~~l~ald~~tG~~~W~~~~~~~~~-------------------~---------~~~ 121 (417)
++|. +.++ + .+.|+|||++||+++|+++...... . ...
T Consensus 168 ~~p~--v~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w 245 (677)
T 1kb0_A 168 GAPR--VFKGKVIIGNGGAEYGVRGYITAYDAETGERKWRWFSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMW 245 (677)
T ss_dssp SCCE--EETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCC
T ss_pred cCcE--EECCEEEEEecccccCCCCEEEEEECCCCcEEEEeccCCCCccccccccccccccccccccCceeEeCCCcccc
Confidence 4554 3333 1 2789999999999999999643321 0 011
Q ss_pred eceeE--EcCeEEEEeCCccCc-----cccCcccCCCceEEEEeCCCCceeceeeecCCCCCCCCCCCCccccCCCceee
Q 039692 122 MSGSV--YMGAFYVGLSSLEEA-----LPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYSGAAVWGSSPAID 194 (417)
Q Consensus 122 ~sp~v--~~~~v~v~~~~~~~~-----~~~~~~~~~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~~gg~~~~~~pa~d 194 (417)
.++++ .++.||+++.+...- .+......+.+.|+|||++||+++|+++..+........ .+.|.+-
T Consensus 246 ~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~wd~~~-------~~~p~l~ 318 (677)
T 1kb0_A 246 DSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNWDYTS-------TQPMILA 318 (677)
T ss_dssp SCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCC-------CSCCEEE
T ss_pred cceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCccccccc-------CCCcEEE
Confidence 23333 367899988753110 000011112357999999999999999985532211000 0122221
Q ss_pred cccCcccCCCCCCCCCCCCcccCCCCCCeEEEEECCCCceEEEecCCCCcceeeeccC---------------CCCCCCC
Q 039692 195 VIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLV---------------PNNPDCP 259 (417)
Q Consensus 195 ~~~~~~~~~~~~~p~~~~~~v~~~~~~~~l~ald~~tG~~~W~~~~~~~~~~~~~~~~---------------~~~~~c~ 259 (417)
..... +. ....++....++.|++||++||+++|+++..+.. |... ++ .....|+
T Consensus 319 ~~~~d------G~---~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~-~~~~-~d~~g~~~~~~~~~~~~~~~~~~P 387 (677)
T 1kb0_A 319 DIKIA------GK---PRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVN-WASG-YDKHGKPIGIAAARDGSKPQDAVP 387 (677)
T ss_dssp EEEET------TE---EEEEEEECCTTSEEEEEETTTCCEEEEEESSCCS-SEEE-ECTTSCEEECGGGGCTTSCEECSS
T ss_pred ecccC------Cc---EeeEEEEECCCCEEEEEECCCCCEeccccccccC-cccc-cCCCCceeeccccCcCCCccEECc
Confidence 10000 00 0023566678899999999999999999876422 2100 00 0001232
Q ss_pred CCCCCCCccCCCceEEEEecCCeeeeEEEEEcc-------------------------------------------cceE
Q 039692 260 PGPNLDADFGEAPMLLTISTNGRFRDVVVAVQK-------------------------------------------SGFA 296 (417)
Q Consensus 260 ~~~~~~~~~~~~p~v~~~~~~G~~~~~v~~~~~-------------------------------------------~G~l 296 (417)
....- .+. .++.++. + ++++|++.. .|.|
T Consensus 388 ~~~G~-~~w--~~~a~dp--~---~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l 459 (677)
T 1kb0_A 388 GPYGA-HNW--HPMSFNP--Q---TGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRL 459 (677)
T ss_dssp CTTCS-SCS--SCCEEET--T---TTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEE
T ss_pred Ccccc-cCC--CCceEcC--C---CCEEEEeChhcceeeecccccccccccccccccccccccccccccccCCCCCccEE
Confidence 11000 000 1222211 1 345665432 2889
Q ss_pred EEEECCCCcEEEEeecCCCCCCCcc-----eecccccCCeEEEEeccCCceeeeecCCCCCCCccceee-eCCeEEeccC
Q 039692 297 WAFDRDSGDIIWFKLAGPGGREGGG-----VWGAATDGRRVYTNIVNNDRIIWSTADPSNETAHGPVTV-VNGVLFAGSV 370 (417)
Q Consensus 297 ~ald~~tG~~lW~~~~~~~~~~g~~-----~~~~~~~~~~vy~~~~~~~~~~W~~~~~~~~~~~~p~~~-~~~~v~~~~~ 370 (417)
+|+|++||+++|+.+.+.+...+.. .......++.+++.+..+++++|+...+. .....|++. .++..|+...
T Consensus 460 ~A~D~~tG~~~W~~~~~~~~~~g~~~~~g~~v~~g~~dg~l~a~D~~tG~~lw~~~~~~-~~~~~p~~y~~~G~~~v~~~ 538 (677)
T 1kb0_A 460 LAWDPVAQKAAWSVEHVSPWNGGTLTTAGNVVFQGTADGRLVAYHAATGEKLWEAPTGT-GVVAAPSTYMVDGRQYVSVA 538 (677)
T ss_dssp EEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSS-CCCSCCEEEEETTEEEEEEE
T ss_pred EEEeCCCCcEEeecCCCCCCcCcceEeCCCEEEEECCCCcEEEEECCCCceeeeeeCCC-CcccCCEEEEeCCEEEEEEe
Confidence 9999999999999987532111111 11112356778888999999999999874 677889864 6788888776
Q ss_pred CCC
Q 039692 371 SAN 373 (417)
Q Consensus 371 ~g~ 373 (417)
.|.
T Consensus 539 ~G~ 541 (677)
T 1kb0_A 539 VGW 541 (677)
T ss_dssp ECC
T ss_pred ccC
Confidence 664
No 14
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=99.92 E-value=3.7e-23 Score=218.53 Aligned_cols=328 Identities=16% Similarity=0.185 Sum_probs=199.5
Q ss_pred ccCccccccceeeeEEEeCCc-----------eeeCcEEECCEEEEeccCCcEEEEECCCCccceEeeccc-----ccCC
Q 039692 19 LINPVTVRNLRLRWSFYAGKD-----------ISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSK-----LTGL 82 (417)
Q Consensus 19 ~i~~~~~~~~~~~W~~~~~~~-----------~~~~p~~~~g~v~v~~~~g~l~ald~~tG~~~W~~~~~~-----~~~~ 82 (417)
.|.+.++.+++++|++..... +..+|++.+++||+++.++.|+|||++||+++|+++... ...+
T Consensus 77 ~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~ 156 (668)
T 1kv9_A 77 RVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVALWGDKVYVGTLDGRLIALDAKTGKAIWSQQTTDPAKPYSITG 156 (668)
T ss_dssp EEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEEBTEEEEECTTSEEEEEETTTCCEEEEEECSCTTSSCBCCS
T ss_pred eEEEEECCCChhceEECCCCCccccccccccCCccceEEECCEEEEEcCCCEEEEEECCCCCEeeeeccCCCCCcceecC
Confidence 477888999999999988653 246789999999999999999999999999999999853 2334
Q ss_pred cceeeEEeee------------eeEEEEEecCCCceeeeeecCC-CCC--------------------------cceeec
Q 039692 83 SGTGIVVNVT------------VAVVVAVSRSNGELVWSTQIDP-RPR--------------------------SQITMS 123 (417)
Q Consensus 83 ~p~~~v~~~~------------v~~l~ald~~tG~~~W~~~~~~-~~~--------------------------~~~~~s 123 (417)
+|. +.++. .+.|+|||++||+++|+++... .+. +...++
T Consensus 157 ~P~--v~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~ 234 (668)
T 1kv9_A 157 APR--VVKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYTVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDS 234 (668)
T ss_dssp CCE--EETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSC
T ss_pred CCE--EECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEecccCCCCCccccccccccccccCCccceeeeCCCCccccc
Confidence 454 33331 2689999999999999998532 111 011123
Q ss_pred eeEE--cCeEEEEeCCccCc-----cccCcccCCCceEEEEeCCCCceeceeeecCCCCCCCCCCCCccccCCCceeecc
Q 039692 124 GSVY--MGAFYVGLSSLEEA-----LPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYSGAAVWGSSPAIDVI 196 (417)
Q Consensus 124 p~v~--~~~v~v~~~~~~~~-----~~~~~~~~~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~~gg~~~~~~pa~d~~ 196 (417)
+++. .+.||+++.++..- .+......+.+.|+|||++||+++|+++..+....... . +.|.+-.+
T Consensus 235 ~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~-------~-~~~~~~~d 306 (668)
T 1kv9_A 235 MAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFT-------A-TQQITLAE 306 (668)
T ss_dssp EEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCC-------C-CSCEEEEE
T ss_pred eEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCcccccc-------C-CCCcEEEE
Confidence 4443 57899998753200 00001111234699999999999999998543221100 0 01111000
Q ss_pred cCcccCCCCCCCCCCCCcccCCCCCCeEEEEECCCCceEEEecCCCCcceeeecc-C--------------CCCCCCCCC
Q 039692 197 RRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCL-V--------------PNNPDCPPG 261 (417)
Q Consensus 197 ~~~~~~~~~~~p~~~~~~v~~~~~~~~l~ald~~tG~~~W~~~~~~~~~~~~~~~-~--------------~~~~~c~~~ 261 (417)
... ... ....++....++.|++||++||+++|+.+..+. .|...-. . .....|+..
T Consensus 307 ~~~-----~G~---~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~-~w~~~~d~~~g~p~~~~~~~~~~~~~~~~p~~ 377 (668)
T 1kv9_A 307 LNI-----DGK---PRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKV-TWAEKVDLATGRPVEAPGVRYEKEPIVMWPSP 377 (668)
T ss_dssp EEE-----TTE---EEEEEEECCTTSEEEEEETTTCCEEEEEESSCC-CSEEEECTTTCCEEECTTTTCSSSCEEESSCT
T ss_pred ecc-----CCc---EEEEEEEECCCCEEEEEECCCCCEecccccccc-ccccccccccCCccccccccccCCeeEECCCC
Confidence 000 000 001355667889999999999999998876542 1221000 0 000112211
Q ss_pred CCCCCccCCCceEEEEecCCeeeeEEEEE------------------------------------cccceEEEEECCCCc
Q 039692 262 PNLDADFGEAPMLLTISTNGRFRDVVVAV------------------------------------QKSGFAWAFDRDSGD 305 (417)
Q Consensus 262 ~~~~~~~~~~p~v~~~~~~G~~~~~v~~~------------------------------------~~~G~l~ald~~tG~ 305 (417)
..- .+ -.++-++. + .+++|+. ..+|.|+|+|+.||+
T Consensus 378 ~G~-~~--w~~~a~dp--~---~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~~~~g~l~A~D~~tG~ 449 (668)
T 1kv9_A 378 FGA-HN--WHSMSFNP--G---TGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAAVVSGALLAWDPVKQK 449 (668)
T ss_dssp TCS-SC--SSCCEEET--T---TTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGGGCEEEEEEEETTTTE
T ss_pred ccc-cC--CCcceECC--C---CCEEEEeccccceEeeeeccccccccccccCccccccCCCCCCCccceEEEEeCCCCc
Confidence 000 00 01111110 0 2334432 234899999999999
Q ss_pred EEEEeecCCCCCCCc-----ceecccccCCeEEEEeccCCceeeeecCCCCCCCcccee-eeCCeEEeccCCCCC
Q 039692 306 IIWFKLAGPGGREGG-----GVWGAATDGRRVYTNIVNNDRIIWSTADPSNETAHGPVT-VVNGVLFAGSVSANG 374 (417)
Q Consensus 306 ~lW~~~~~~~~~~g~-----~~~~~~~~~~~vy~~~~~~~~~~W~~~~~~~~~~~~p~~-~~~~~v~~~~~~g~g 374 (417)
++|+.+.+.+...+. ........++.|++.+.++++++|+.+.+. ....+|++ ..++.+|+...+|.|
T Consensus 450 ~~W~~~~~~~~~~~~~~t~gg~vf~g~~dg~l~a~d~~tG~~l~~~~~~~-~~~~~p~~~~~~G~~yva~~~G~g 523 (668)
T 1kv9_A 450 AAWKVPYPTHWNGGTLSTAGNLVFQGTAAGQMHAYSADKGEALWQFEAQS-GIVAAPMTFELAGRQYVAIMAGWG 523 (668)
T ss_dssp EEEEEEESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSS-CCCSCCEEEEETTEEEEEEEECCC
T ss_pred EEEEccCCCCCcCceeEeCCCEEEEECCcccchhhhhhcChhheEecCCC-CcccCceEEEECCEEEEEEEecCC
Confidence 999998752211110 011112345677777888899999999874 66778886 378999998888763
No 15
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.90 E-value=3.2e-26 Score=225.24 Aligned_cols=245 Identities=16% Similarity=0.179 Sum_probs=147.9
Q ss_pred eeCcEEECCEEEEeccCCcEEEEECCCCccceEeecccccCCcceeeEEee--e-----eeEEEEEecCCCceeeeeecC
Q 039692 41 SATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTGLSGTGIVVNV--T-----VAVVVAVSRSNGELVWSTQID 113 (417)
Q Consensus 41 ~~~p~~~~g~v~v~~~~g~l~ald~~tG~~~W~~~~~~~~~~~p~~~v~~~--~-----v~~l~ald~~tG~~~W~~~~~ 113 (417)
.++|++.+++||+++.++.|+|+|++||+++|+++. ..+.++|. +.++ + .+.|+|+|++||+++|+.+..
T Consensus 2 ~ssP~v~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~-~~~~s~p~--~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~ 78 (369)
T 2hz6_A 2 SSTVTLPETLLFVSTLDGSLHAVSKRTGSIKWTLKE-DPVLQVPT--HVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFT 78 (369)
T ss_dssp ------CTTEEEEEETTSEEEEEETTTCCEEEEEEC-CCSCCCC-------CCEEECTTTCCEEEC-----CCSEECSCC
T ss_pred CCCCeeeCCEEEEEcCCCEEEEEECCCCCEEEEecC-CCceecce--EcCCCEEEEeCCCCEEEEEECCCCceeeeeecc
Confidence 368999999999999999999999999999999998 44444554 3333 2 289999999999999998753
Q ss_pred CCCCcceeeceeE-EcCeEEEEeCCccCccccCcccCCCceEEEEeCCCCceeceeeecCCCCCCCCCCCCccccCCCce
Q 039692 114 PRPRSQITMSGSV-YMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYSGAAVWGSSPA 192 (417)
Q Consensus 114 ~~~~~~~~~sp~v-~~~~v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~~gg~~~~~~pa 192 (417)
.. ....++|++ .++.||++.. ++.|+|+|++||+++|++....... .
T Consensus 79 ~~--~~~~~sp~~~~~~~v~~g~~--------------dg~v~a~D~~tG~~~w~~~~~~~~~-------------~--- 126 (369)
T 2hz6_A 79 IP--ELVQASPCRSSDGILYMGKK--------------QDIWYVIDLLTGEKQQTLSSAFADS-------------L--- 126 (369)
T ss_dssp HH--HHHTTCSCC-----CCCCEE--------------EEEEEEECCC--------------------------------
T ss_pred Cc--cccccCceEecCCEEEEEeC--------------CCEEEEEECCCCcEEEEecCCCccc-------------c---
Confidence 11 123457776 7788888775 5899999999999999987631100 0
Q ss_pred eecccCcccCCCCCCCCCCCCcccCCCCCCeEEEEECCCCceEEEecCCCCcceeeeccCCCCCCCCCCCCCCCccCCCc
Q 039692 193 IDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAP 272 (417)
Q Consensus 193 ~d~~~~~~~~~~~~~p~~~~~~v~~~~~~~~l~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~p 272 (417)
.| .++.++.+..++.|+|+|++||+++|+++.... ++|
T Consensus 127 --------------~p--~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~~~--------------------------~~~ 164 (369)
T 2hz6_A 127 --------------SP--STSLLYLGRTEYTITMYDTKTRELRWNATYFDY--------------------------AAS 164 (369)
T ss_dssp ----------------------EEEEEEEEEEECCCSSSSSCCCEEEEEEE--------------------------CCB
T ss_pred --------------cc--cCCEEEEEecCCEEEEEECCCCCEEEeEecccc--------------------------cCc
Confidence 11 234456666778999999999999999874321 123
Q ss_pred eEEEEecCCeeeeEEEEEcccceEEEEECCCCcEEEEeecCCCCCCCcceeccc-ccCCeEE------------EEeccC
Q 039692 273 MLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDIIWFKLAGPGGREGGGVWGAA-TDGRRVY------------TNIVNN 339 (417)
Q Consensus 273 ~v~~~~~~G~~~~~v~~~~~~G~l~ald~~tG~~lW~~~~~~~~~~g~~~~~~~-~~~~~vy------------~~~~~~ 339 (417)
++.. ++..++.+|+++.+|.++|+|+++|+++|+.+...+ ....++ ..++.+| +.+..+
T Consensus 165 ~~~~---~~~~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~~p-----v~~~~~~~~dg~~~v~~~~~~~~~l~~ld~~t 236 (369)
T 2hz6_A 165 LPED---DVDYKMSHFVSNGDGLVVTVDSESGDVLWIQNYASP-----VVAFYVWQREGLRKVMHINVAVETLRYLTFMS 236 (369)
T ss_dssp CCCC---CTTCCCCEEEEETSCEEEEECTTTCCEEEEEECSSC-----EEEEEECTTSSCEEECCEEEEHHHHHHHHHHH
T ss_pred cccC---CccccceEEEECCCCEEEEEECCCCcEEEEecCCCc-----eEEEEEecCCceEeccceeecccceeeeehhc
Confidence 3220 000125688888999999999999999999986421 111122 2344443 334456
Q ss_pred Cc----eeeeecCCCCCCCccceeeeCCeEEeccCCCC
Q 039692 340 DR----IIWSTADPSNETAHGPVTVVNGVLFAGSVSAN 373 (417)
Q Consensus 340 ~~----~~W~~~~~~~~~~~~p~~~~~~~v~~~~~~g~ 373 (417)
++ .+|+.+... .. .+|+ +.++.||+++.+|.
T Consensus 237 G~~~~~~~W~~~~~~-~~-~sp~-~~~g~lyv~~~~G~ 271 (369)
T 2hz6_A 237 GEVGRITKWKYPFPK-ET-EAKS-KLTPTLYVGKYSTS 271 (369)
T ss_dssp HHHHHHHTSCCCCCC-HH-HHHH-HSEEEECBEECSSC
T ss_pred CCcccceeeeeccCc-cc-cccc-cccceEEEecccCC
Confidence 68 999998753 33 3777 77889999998876
No 16
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=99.88 E-value=5.6e-22 Score=189.71 Aligned_cols=279 Identities=20% Similarity=0.334 Sum_probs=188.7
Q ss_pred cccccceeeeEEEeCCceeeCcEEE-CCEEEEeccCCcEEEEECCCCccceEeecccccCCcceeeEE-eeee-----eE
Q 039692 23 VTVRNLRLRWSFYAGKDISATPAVA-NGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTGLSGTGIVV-NVTV-----AV 95 (417)
Q Consensus 23 ~~~~~~~~~W~~~~~~~~~~~p~~~-~g~v~v~~~~g~l~ald~~tG~~~W~~~~~~~~~~~p~~~v~-~~~v-----~~ 95 (417)
.+.++++++|++.++..+.++|++. ++.||+++.++.|+++| .+|+++|+++++.....++. +. ++.+ +
T Consensus 4 ~~~~~g~~~W~~~~~~~~~~~~~~d~~g~l~v~t~~~~l~~~d-~~g~~~~~~~~~~~~~~~~~--~~~~g~l~v~t~~- 79 (330)
T 3hxj_A 4 GGVNDCKIKWEFLIGNSIDSSPILAKNGTIYLGSSNKNLYAIN-TDGSVKWFFKSGEIIECRPS--IGKDGTIYFGSDK- 79 (330)
T ss_dssp --------CCTTTSCEEECCCCEECTTSCEECSSTTTTTEEEC-TTSCEEESSCGGGEEEECCE--ETTTTEECCSSCE-
T ss_pred cccCCceEEEEEeCCCCcccCceEccCCeEEEEcCCCEEEEEC-CCCcEEEEEecCCCcccceE--EecCCcEEEecCc-
Confidence 4577899999999999888999994 88999999889999999 89999999887654322332 22 2321 6
Q ss_pred EEEEecCCCceeeeeecCCCCCcceeeceeEEcCeEEEEeCCccCccccCcccCCCceEEEEeCCCCceeceeeecCCCC
Q 039692 96 VVAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNG 175 (417)
Q Consensus 96 l~ald~~tG~~~W~~~~~~~~~~~~~~sp~v~~~~v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~~~W~~~~~~~~~ 175 (417)
|+++|+ +|+++|++..... ...+|.+.++.||+++. ++.|+++|++ |+++|++.......
T Consensus 80 l~~~d~-~g~~~~~~~~~~~----~~~~~~~~~~~l~v~t~--------------~~~l~~~d~~-g~~~~~~~~~~~~~ 139 (330)
T 3hxj_A 80 VYAINP-DGTEKWRFDTKKA----IVSDFTIFEDILYVTSM--------------DGHLYAINTD-GTEKWRFKTKKAIY 139 (330)
T ss_dssp EEEECC-CGGGGGGSCC---------CCEEEETTEEEEECT--------------TSEEEEECTT-SCEEEEEECSSCCC
T ss_pred EEEECC-CCcEEEEEECCCC----cccCceEECCEEEEEec--------------CCEEEEEcCC-CCEEEEEcCCCcee
Confidence 999996 9999999886533 45567778999999886 4799999999 99999987632110
Q ss_pred CCCCCCCCccccCCCceeecccCcccCCCCCCCCCCCCcccCCCCCCeEEEEECCCCceEEEecCCCCcceeeeccCCCC
Q 039692 176 GKRGGYSGAAVWGSSPAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNN 255 (417)
Q Consensus 176 ~~~~~~~gg~~~~~~pa~d~~~~~~~~~~~~~p~~~~~~v~~~~~~~~l~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~ 255 (417)
..+..+. ++.++.++.++.|+++|++ |+++|++......
T Consensus 140 -------------~~~~~~~----------------~g~l~vgt~~~~l~~~d~~-g~~~~~~~~~~~~----------- 178 (330)
T 3hxj_A 140 -------------ATPIVSE----------------DGTIYVGSNDNYLYAINPD-GTEKWRFKTNDAI----------- 178 (330)
T ss_dssp -------------SCCEECT----------------TSCEEEECTTSEEEEECTT-SCEEEEEECSSCC-----------
T ss_pred -------------eeeEEcC----------------CCEEEEEcCCCEEEEECCC-CCEeEEEecCCCc-----------
Confidence 1233332 3445666677899999999 9999999864321
Q ss_pred CCCCCCCCCCCccCCCceEEEEecCCeeeeEEEEEcccceEEEEECCCCcEEEEeecCCCCCCCcceeccccc-CCeEEE
Q 039692 256 PDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDIIWFKLAGPGGREGGGVWGAATD-GRRVYT 334 (417)
Q Consensus 256 ~~c~~~~~~~~~~~~~p~v~~~~~~G~~~~~v~~~~~~G~l~ald~~tG~~lW~~~~~~~~~~g~~~~~~~~~-~~~vy~ 334 (417)
..++++. . ++.||+++ +.|+++| .+|+.+|+..... .....++.+ ++.+|+
T Consensus 179 -------------~~~~~~d---~----~g~l~v~t--~~l~~~d-~~g~~~~~~~~~~-----~~~~~~~~~~~g~l~v 230 (330)
T 3hxj_A 179 -------------TSAASIG---K----DGTIYFGS--DKVYAIN-PDGTEKWNFYAGY-----WTVTRPAISEDGTIYV 230 (330)
T ss_dssp -------------CSCCEEC---T----TCCEEEES--SSEEEEC-TTSCEEEEECCSS-----CCCSCCEECTTSCEEE
T ss_pred -------------eeeeEEc---C----CCEEEEEe--CEEEEEC-CCCcEEEEEccCC-----cceeceEECCCCeEEE
Confidence 1344442 1 34688888 7899999 8999999988642 112223333 234444
Q ss_pred Eec--------cCCceeeeecCCCCCCCccceeeeCCeEEeccCCCC-------CCe---------ecccccc-cCCeEE
Q 039692 335 NIV--------NNDRIIWSTADPSNETAHGPVTVVNGVLFAGSVSAN-------GST---------VYGGVPA-SYGCIY 389 (417)
Q Consensus 335 ~~~--------~~~~~~W~~~~~~~~~~~~p~~~~~~~v~~~~~~g~-------g~~---------~~~sp~~-~~g~ly 389 (417)
... .+++.+|+..... ....++++..++.+|+++.+|. |.. ...+|++ .+|+||
T Consensus 231 ~t~~~gl~~~~~~g~~~~~~~~~~-~~~~~~~~~~~g~l~v~t~~ggl~~~d~~g~~~~~~~~~~~~~~~~~~d~~g~l~ 309 (330)
T 3hxj_A 231 TSLDGHLYAINPDGTEKWRFKTGK-RIESSPVIGNTDTIYFGSYDGHLYAINPDGTEKWNFETGSWIIATPVIDENGTIY 309 (330)
T ss_dssp EETTTEEEEECTTSCEEEEEECSS-CCCSCCEECTTSCEEEECTTCEEEEECTTSCEEEEEECSSCCCSCCEECTTCCEE
T ss_pred EcCCCeEEEECCCCCEeEEeeCCC-CccccceEcCCCeEEEecCCCCEEEECCCCcEEEEEEcCCccccceEEcCCCEEE
Confidence 432 3467889987653 4455666444899999998754 332 2366777 799999
Q ss_pred EecCee
Q 039692 390 LGNGYT 395 (417)
Q Consensus 390 v~~~~~ 395 (417)
+++..+
T Consensus 310 ~gt~~G 315 (330)
T 3hxj_A 310 FGTRNG 315 (330)
T ss_dssp EECTTS
T ss_pred EEcCCC
Confidence 977544
No 17
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.84 E-value=2.5e-22 Score=197.47 Aligned_cols=235 Identities=12% Similarity=0.153 Sum_probs=138.6
Q ss_pred ccCccccccceeeeEEEeCCceeeCcEEECCEEEEe-ccCCcEEEEECCCCccceEeecc--cccCCcceeeE-Eee---
Q 039692 19 LINPVTVRNLRLRWSFYAGKDISATPAVANGVVYFP-SWNGYLYAVNAFNGALIWEQNLS--KLTGLSGTGIV-VNV--- 91 (417)
Q Consensus 19 ~i~~~~~~~~~~~W~~~~~~~~~~~p~~~~g~v~v~-~~~g~l~ald~~tG~~~W~~~~~--~~~~~~p~~~v-~~~--- 91 (417)
.|.+.+..+++++|++.. +.+.+.|++.++.+|+. +.++.|+|+|++||+.+|+.+.. ....++|+ + .++
T Consensus 20 ~v~a~d~~tG~~~W~~~~-~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~~~sp~--~~~~~~v~ 96 (369)
T 2hz6_A 20 SLHAVSKRTGSIKWTLKE-DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELVQASPC--RSSDGILY 96 (369)
T ss_dssp EEEEEETTTCCEEEEEEC-CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCHHHHHTTCSC--C-----CC
T ss_pred EEEEEECCCCCEEEEecC-CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCccccccCce--EecCCEEE
Confidence 478888999999999999 67788999998866665 68999999999999999998764 22334554 3 333
Q ss_pred ---eeeEEEEEecCCCceeeeeecCCCCCcceeeceeEEcCeEEEEeCCccCccccCcccCCCceEEEEeCCCCceecee
Q 039692 92 ---TVAVVVAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQT 168 (417)
Q Consensus 92 ---~v~~l~ald~~tG~~~W~~~~~~~~~~~~~~sp~v~~~~v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~~~W~~ 168 (417)
..+.|+|+|++||+++|+++.... ...+| .++.||++.. ++.|+|+|++||+++|++
T Consensus 97 ~g~~dg~v~a~D~~tG~~~w~~~~~~~----~~~~p--~~~~v~~~~~--------------dg~v~a~d~~tG~~~W~~ 156 (369)
T 2hz6_A 97 MGKKQDIWYVIDLLTGEKQQTLSSAFA----DSLSP--STSLLYLGRT--------------EYTITMYDTKTRELRWNA 156 (369)
T ss_dssp CCEEEEEEEEECCC----------------------------EEEEEE--------------EEEEECCCSSSSSCCCEE
T ss_pred EEeCCCEEEEEECCCCcEEEEecCCCc----ccccc--cCCEEEEEec--------------CCEEEEEECCCCCEEEeE
Confidence 238899999999999999986532 33445 5788998876 589999999999999998
Q ss_pred eecCCCCCCCCCCCCccccCCCceeecccCcccCCCCCCCCCCCCcccCCCCCCeEEEEECCCCceEEEecCCCCcceee
Q 039692 169 YMLPDNGGKRGGYSGAAVWGSSPAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYF 248 (417)
Q Consensus 169 ~~~~~~~~~~~~~~gg~~~~~~pa~d~~~~~~~~~~~~~p~~~~~~v~~~~~~~~l~ald~~tG~~~W~~~~~~~~~~~~ 248 (417)
+.... +.++++... ..++.++.+..++.++|+|++||+++|+++...
T Consensus 157 ~~~~~---------------~~~~~~~~~------------~~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~~------ 203 (369)
T 2hz6_A 157 TYFDY---------------AASLPEDDV------------DYKMSHFVSNGDGLVVTVDSESGDVLWIQNYAS------ 203 (369)
T ss_dssp EEEEE---------------CCBCCCCCT------------TCCCCEEEEETSCEEEEECTTTCCEEEEEECSS------
T ss_pred ecccc---------------cCccccCCc------------cccceEEEECCCCEEEEEECCCCcEEEEecCCC------
Confidence 76321 123332211 122445666778999999999999999988532
Q ss_pred eccCCCCCCCCCCCCCCCccCCCceEEEEecCCeeeeEEEEE---cccceEEEEECCCCc----EEEEeecCCCCCCCcc
Q 039692 249 TCLVPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAV---QKSGFAWAFDRDSGD----IIWFKLAGPGGREGGG 321 (417)
Q Consensus 249 ~~~~~~~~~c~~~~~~~~~~~~~p~v~~~~~~G~~~~~v~~~---~~~G~l~ald~~tG~----~lW~~~~~~~~~~g~~ 321 (417)
|++....... +..+|+. ..++.++|||+++|+ ++|+.+.+ +..
T Consensus 204 -----------------------pv~~~~~~~~--dg~~~v~~~~~~~~~l~~ld~~tG~~~~~~~W~~~~~-----~~~ 253 (369)
T 2hz6_A 204 -----------------------PVVAFYVWQR--EGLRKVMHINVAVETLRYLTFMSGEVGRITKWKYPFP-----KET 253 (369)
T ss_dssp -----------------------CEEEEEECTT--SSCEEECCEEEEHHHHHHHHHHHHHHHHHHTSCCCCC-----CHH
T ss_pred -----------------------ceEEEEEecC--CceEeccceeecccceeeeehhcCCcccceeeeeccC-----ccc
Confidence 2222111111 1223211 124568999999999 99999864 122
Q ss_pred eecccccCCeEEEEeccCC
Q 039692 322 VWGAATDGRRVYTNIVNND 340 (417)
Q Consensus 322 ~~~~~~~~~~vy~~~~~~~ 340 (417)
. .|++.++.||+.+.++.
T Consensus 254 ~-sp~~~~g~lyv~~~~G~ 271 (369)
T 2hz6_A 254 E-AKSKLTPTLYVGKYSTS 271 (369)
T ss_dssp H-HHHHSEEEECBEECSSC
T ss_pred c-ccccccceEEEecccCC
Confidence 2 56666677777665543
No 18
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=99.81 E-value=1.8e-18 Score=165.22 Aligned_cols=258 Identities=20% Similarity=0.314 Sum_probs=180.7
Q ss_pred ccCccccccceeeeEEEeCCceeeCcEEE-CCEEEEeccCCcEEEEECCCCccceEeecccccCCcceeeEEeee--e--
Q 039692 19 LINPVTVRNLRLRWSFYAGKDISATPAVA-NGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTGLSGTGIVVNVT--V-- 93 (417)
Q Consensus 19 ~i~~~~~~~~~~~W~~~~~~~~~~~p~~~-~g~v~v~~~~g~l~ald~~tG~~~W~~~~~~~~~~~p~~~v~~~~--v-- 93 (417)
.|.+.+ .++++.|++.++..+..++++. ++.||+++.+ |+++|+ +|+++|++........++. +.++. +
T Consensus 41 ~l~~~d-~~g~~~~~~~~~~~~~~~~~~~~~g~l~v~t~~--l~~~d~-~g~~~~~~~~~~~~~~~~~--~~~~~l~v~t 114 (330)
T 3hxj_A 41 NLYAIN-TDGSVKWFFKSGEIIECRPSIGKDGTIYFGSDK--VYAINP-DGTEKWRFDTKKAIVSDFT--IFEDILYVTS 114 (330)
T ss_dssp TTEEEC-TTSCEEESSCGGGEEEECCEETTTTEECCSSCE--EEEECC-CGGGGGGSCC-----CCEE--EETTEEEEEC
T ss_pred EEEEEC-CCCcEEEEEecCCCcccceEEecCCcEEEecCc--EEEECC-CCcEEEEEECCCCcccCce--EECCEEEEEe
Confidence 477777 8899999998887777788886 8899999866 999997 9999999988765444444 33442 1
Q ss_pred --eEEEEEecCCCceeeeeecCCCCCcceeeceeEE-cCeEEEEeCCccCccccCcccCCCceEEEEeCCCCceeceeee
Q 039692 94 --AVVVAVSRSNGELVWSTQIDPRPRSQITMSGSVY-MGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYM 170 (417)
Q Consensus 94 --~~l~ald~~tG~~~W~~~~~~~~~~~~~~sp~v~-~~~v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~~~W~~~~ 170 (417)
+.|+++|.+ |+++|+...... ...+|++. ++.+++++. ++.|+++|++ |+++|++..
T Consensus 115 ~~~~l~~~d~~-g~~~~~~~~~~~----~~~~~~~~~~g~l~vgt~--------------~~~l~~~d~~-g~~~~~~~~ 174 (330)
T 3hxj_A 115 MDGHLYAINTD-GTEKWRFKTKKA----IYATPIVSEDGTIYVGSN--------------DNYLYAINPD-GTEKWRFKT 174 (330)
T ss_dssp TTSEEEEECTT-SCEEEEEECSSC----CCSCCEECTTSCEEEECT--------------TSEEEEECTT-SCEEEEEEC
T ss_pred cCCEEEEEcCC-CCEEEEEcCCCc----eeeeeEEcCCCEEEEEcC--------------CCEEEEECCC-CCEeEEEec
Confidence 889999998 999999986532 34566666 788999886 4799999999 999999886
Q ss_pred cCCCCCCCCCCCCccccCCCceeecccCcccCCCCCCCCCCCCcccCCCCCCeEEEEECCCCceEEEecCCCCcceeeec
Q 039692 171 LPDNGGKRGGYSGAAVWGSSPAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTC 250 (417)
Q Consensus 171 ~~~~~~~~~~~~gg~~~~~~pa~d~~~~~~~~~~~~~p~~~~~~v~~~~~~~~l~ald~~tG~~~W~~~~~~~~~~~~~~ 250 (417)
..... ..+.+|. ++.++.++ +.|+++| .+|+.+|++......
T Consensus 175 ~~~~~-------------~~~~~d~----------------~g~l~v~t--~~l~~~d-~~g~~~~~~~~~~~~------ 216 (330)
T 3hxj_A 175 NDAIT-------------SAASIGK----------------DGTIYFGS--DKVYAIN-PDGTEKWNFYAGYWT------ 216 (330)
T ss_dssp SSCCC-------------SCCEECT----------------TCCEEEES--SSEEEEC-TTSCEEEEECCSSCC------
T ss_pred CCCce-------------eeeEEcC----------------CCEEEEEe--CEEEEEC-CCCcEEEEEccCCcc------
Confidence 32110 1233332 23345555 8899999 899999998865321
Q ss_pred cCCCCCCCCCCCCCCCccCCCceEEEEecCCeeeeEEEEEcccceEEEEECCCCcEEEEeecCCCCCCCcceeccccc-C
Q 039692 251 LVPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDIIWFKLAGPGGREGGGVWGAATD-G 329 (417)
Q Consensus 251 ~~~~~~~c~~~~~~~~~~~~~p~v~~~~~~G~~~~~v~~~~~~G~l~ald~~tG~~lW~~~~~~~~~~g~~~~~~~~~-~ 329 (417)
..++.+. . ++.||+++.++.|+++| .+|+.+|+...... ....++.+ +
T Consensus 217 ------------------~~~~~~~-----~--~g~l~v~t~~~gl~~~~-~~g~~~~~~~~~~~-----~~~~~~~~~~ 265 (330)
T 3hxj_A 217 ------------------VTRPAIS-----E--DGTIYVTSLDGHLYAIN-PDGTEKWRFKTGKR-----IESSPVIGNT 265 (330)
T ss_dssp ------------------CSCCEEC-----T--TSCEEEEETTTEEEEEC-TTSCEEEEEECSSC-----CCSCCEECTT
T ss_pred ------------------eeceEEC-----C--CCeEEEEcCCCeEEEEC-CCCCEeEEeeCCCC-----ccccceEcCC
Confidence 1234443 1 34788898889999998 58999999886421 11122222 3
Q ss_pred C---------eEEEEeccCCceeeeecCCCCCCCccceeeeCCeEEeccCCCC
Q 039692 330 R---------RVYTNIVNNDRIIWSTADPSNETAHGPVTVVNGVLFAGSVSAN 373 (417)
Q Consensus 330 ~---------~vy~~~~~~~~~~W~~~~~~~~~~~~p~~~~~~~v~~~~~~g~ 373 (417)
+ .||+.+. .++.+|+...+. ....+++...++.+|+++.+|.
T Consensus 266 g~l~v~t~~ggl~~~d~-~g~~~~~~~~~~-~~~~~~~~d~~g~l~~gt~~G~ 316 (330)
T 3hxj_A 266 DTIYFGSYDGHLYAINP-DGTEKWNFETGS-WIIATPVIDENGTIYFGTRNGK 316 (330)
T ss_dssp SCEEEECTTCEEEEECT-TSCEEEEEECSS-CCCSCCEECTTCCEEEECTTSC
T ss_pred CeEEEecCCCCEEEECC-CCcEEEEEEcCC-ccccceEEcCCCEEEEEcCCCe
Confidence 3 4555554 568899988753 5556676447899999998764
No 19
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=99.74 E-value=1.3e-18 Score=167.49 Aligned_cols=211 Identities=16% Similarity=0.129 Sum_probs=124.7
Q ss_pred ECCEEEEeccCCcEEEEECCCCccceEeeccc---ccCC-cce-----eeE-Ee-eeeeEEEEEecCCCceeeeeecCCC
Q 039692 47 ANGVVYFPSWNGYLYAVNAFNGALIWEQNLSK---LTGL-SGT-----GIV-VN-VTVAVVVAVSRSNGELVWSTQIDPR 115 (417)
Q Consensus 47 ~~g~v~v~~~~g~l~ald~~tG~~~W~~~~~~---~~~~-~p~-----~~v-~~-~~v~~l~ald~~tG~~~W~~~~~~~ 115 (417)
.++.||+++.+|.|+|||++||+++|+++... .+.. .+. .++ .. ...|.|||||+++|+++|...++..
T Consensus 9 ~~~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~l 88 (339)
T 2be1_A 9 LSDILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQL 88 (339)
T ss_dssp EEEEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHH
T ss_pred eCCEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeeccccc
Confidence 57899999999999999999999999999871 1110 011 111 11 1239999999999999999886431
Q ss_pred C---CcceeeceeE-------EcCeEEEEeCCccCccccCcccCCCceEEEEeCCCCceeceeeecCCCCCCCCCCCCcc
Q 039692 116 P---RSQITMSGSV-------YMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYSGAA 185 (417)
Q Consensus 116 ~---~~~~~~sp~v-------~~~~v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~~gg~ 185 (417)
. .....+.|++ .++.||+++. +++|+|||++||+++|++....... .+....
T Consensus 89 v~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~--------------~g~l~ald~~tG~~~W~~~~~~~~~----~~~~~~ 150 (339)
T 2be1_A 89 VSTSPLHLKTNIVVNDSGKIVEDEKVYTGSM--------------RTIMYTINMLNGEIISAFGPGSKNG----YFGSQS 150 (339)
T ss_dssp HTTCSEEEECC----------CCEEEEECEE--------------EEEEEEEETTTCCEEEEESTTCBCC----------
T ss_pred eeccccccCCCceeecccccccCCEEEEEec--------------CCEEEEEECCCCcEEEEEecCCCcc----cccccc
Confidence 1 0112456666 7899999987 5999999999999999998731100 000000
Q ss_pred ccCCCceeecccCcccCCCCCCCCCCCCcccCCCCCCeEEEEECCCCceEEEecCCCCcceeeeccCCCCCCCCCCCCCC
Q 039692 186 VWGSSPAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLD 265 (417)
Q Consensus 186 ~~~~~pa~d~~~~~~~~~~~~~p~~~~~~v~~~~~~~~l~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~c~~~~~~~ 265 (417)
. ..+..... ..-..+..++.+.....+.+++ ++|+ +|+++....... ..+
T Consensus 151 e--~~~~~~d~----------~~d~~~~~v~ig~~~y~v~~~~-~sG~-~W~~~~s~~~~~----------------~~~ 200 (339)
T 2be1_A 151 V--DCSPEEKI----------KLQECENMIVIGKTIFELGIHS-YDGA-SYNVTYSTWQQN----------------VLD 200 (339)
T ss_dssp --------------------------CCEEEEEEEEEECEECC-TTSC-CCCCEEEEEECC----------------TTT
T ss_pred c--cccccccc----------ccccCCCeEEEecceEEEEEEC-CCCC-eEEEeccccccc----------------ccc
Confidence 0 00110000 0001122345545555677777 6797 898765321100 000
Q ss_pred CccCCCceEEEEecCCeeeeEEEEEcccceEEEEECCCCcEEE-Eeec
Q 039692 266 ADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDIIW-FKLA 312 (417)
Q Consensus 266 ~~~~~~p~v~~~~~~G~~~~~v~~~~~~G~l~ald~~tG~~lW-~~~~ 312 (417)
.++.++..+. . ++.+|+++.+|.|+|||+.+|+++| +.++
T Consensus 201 ~~~~~~~~~s---~----Dg~~~~~~~dg~v~A~d~~~G~~~W~~~~l 241 (339)
T 2be1_A 201 VPLALQNTFS---K----DGMCIAPFRDKSLLASDLDFRIARWVSPTF 241 (339)
T ss_dssp HHHHTTCSSC---S----SSCCEEEETTTEEEEECSTTCCEEEECCCC
T ss_pred cccccccccc---c----CCcEEEECCCCEEEEEECCCCcEEEEeecC
Confidence 0000000000 1 2344668889999999999999999 6665
No 20
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.72 E-value=1.6e-15 Score=142.71 Aligned_cols=229 Identities=12% Similarity=0.109 Sum_probs=140.3
Q ss_pred CEEEEeccCCcEEEEECCCCccceEeecccc--cCCcceeeEEee-----eeeEEEEEecCCCceeeeeecCCCCCccee
Q 039692 49 GVVYFPSWNGYLYAVNAFNGALIWEQNLSKL--TGLSGTGIVVNV-----TVAVVVAVSRSNGELVWSTQIDPRPRSQIT 121 (417)
Q Consensus 49 g~v~v~~~~g~l~ald~~tG~~~W~~~~~~~--~~~~p~~~v~~~-----~v~~l~ald~~tG~~~W~~~~~~~~~~~~~ 121 (417)
..|+..+.++.|++||++||+++|++..... ...... ..++ ..+.++++|+ +|+++|+++.+.. ..+.
T Consensus 6 ~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~--~pdG~ilvs~~~~V~~~d~-~G~~~W~~~~~~~--~~~~ 80 (276)
T 3no2_A 6 HLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAA--TKAGEILFSYSKGAKMITR-DGRELWNIAAPAG--CEMQ 80 (276)
T ss_dssp EEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEE--CTTSCEEEECBSEEEEECT-TSCEEEEEECCTT--CEEE
T ss_pred cEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEE--CCCCCEEEeCCCCEEEECC-CCCEEEEEcCCCC--cccc
Confidence 4566777899999999999999999998642 111111 1122 2288999998 9999999997421 1233
Q ss_pred eceeEEcCeEEEEeCCccCccccCcccCCCceEEEEeCCCCceeceeeecCCCCCCCCCCCCccccCCCceeecccCccc
Q 039692 122 MSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYSGAAVWGSSPAIDVIRRQKQ 201 (417)
Q Consensus 122 ~sp~v~~~~v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~~gg~~~~~~pa~d~~~~~~~ 201 (417)
+...+.++.+++.... .++.++++|+ +|+++|++........ ...+....+.
T Consensus 81 ~~~~~~dG~~lv~~~~------------~~~~v~~vd~-~Gk~l~~~~~~~~~~~-------~~~~~~~v~~-------- 132 (276)
T 3no2_A 81 TARILPDGNALVAWCG------------HPSTILEVNM-KGEVLSKTEFETGIER-------PHAQFRQINK-------- 132 (276)
T ss_dssp EEEECTTSCEEEEEES------------TTEEEEEECT-TSCEEEEEEECCSCSS-------GGGSCSCCEE--------
T ss_pred ccEECCCCCEEEEecC------------CCCEEEEEeC-CCCEEEEEeccCCCCc-------ccccccCceE--------
Confidence 3333456776665431 0378999998 6999999987321100 0000000011
Q ss_pred CCCCCCCCCCCCcccCCCCCCeEEEEECCCCceEEEecCCCCcceeeeccCCCCCCCCCCCCCCCccCCCceEEEEecCC
Q 039692 202 NNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTISTNG 281 (417)
Q Consensus 202 ~~~~~~p~~~~~~v~~~~~~~~l~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~p~v~~~~~~G 281 (417)
......++....++.++++|++ |+++|++...... .+.+.+ .+
T Consensus 133 -------~~~G~~lv~~~~~~~v~~~d~~-G~~~w~~~~~~~~------------------------~~~~~~----~~- 175 (276)
T 3no2_A 133 -------NKKGNYLVPLFATSEVREIAPN-GQLLNSVKLSGTP------------------------FSSAFL----DN- 175 (276)
T ss_dssp -------CTTSCEEEEETTTTEEEEECTT-SCEEEEEECSSCC------------------------CEEEEC----TT-
T ss_pred -------CCCCCEEEEecCCCEEEEECCC-CCEEEEEECCCCc------------------------cceeEc----CC-
Confidence 1122334445567899999998 9999999875221 012222 12
Q ss_pred eeeeEEEEEcccceEEEEECCCCcEEEEeecCC--CCCCCcceecccccCCeEEEEec-------------------cCC
Q 039692 282 RFRDVVVAVQKSGFAWAFDRDSGDIIWFKLAGP--GGREGGGVWGAATDGRRVYTNIV-------------------NND 340 (417)
Q Consensus 282 ~~~~~v~~~~~~G~l~ald~~tG~~lW~~~~~~--~~~~g~~~~~~~~~~~~vy~~~~-------------------~~~ 340 (417)
++++++...++++++||++||+++|+..... +...-.....+...++.+|+.+. .++
T Consensus 176 --g~~~v~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~~~g~~~~~~~~~~~~~~~~~~~g 253 (276)
T 3no2_A 176 --GDCLVACGDAHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLYICNWQGHDREAGKGKHPQLVEIDSEG 253 (276)
T ss_dssp --SCEEEECBTTSEEEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEECTTSCEEEEEECTTCTTGGGSCCCSEEEECTTS
T ss_pred --CCEEEEeCCCCeEEEEeCcCCcEEEEecCCCCCCccccccccceEcCCCCEEEEeccCccccccccCCceEEEECCCC
Confidence 3566666667799999999999999997421 00000011112345666776662 245
Q ss_pred ceeeeecCC
Q 039692 341 RIIWSTADP 349 (417)
Q Consensus 341 ~~~W~~~~~ 349 (417)
+++|+++..
T Consensus 254 ~~~W~~~~~ 262 (276)
T 3no2_A 254 KVVWQLNDK 262 (276)
T ss_dssp BEEEEECCT
T ss_pred CEEEEecCc
Confidence 889998764
No 21
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.69 E-value=5.1e-16 Score=146.19 Aligned_cols=223 Identities=15% Similarity=0.196 Sum_probs=136.8
Q ss_pred ccCccccccceeeeEEEeCC--ceeeCcEEECCEEEEeccCCcEEEEECCCCccceEeecccc--cCC-c--cee--eEE
Q 039692 19 LINPVTVRNLRLRWSFYAGK--DISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKL--TGL-S--GTG--IVV 89 (417)
Q Consensus 19 ~i~~~~~~~~~~~W~~~~~~--~~~~~p~~~~g~v~v~~~~g~l~ald~~tG~~~W~~~~~~~--~~~-~--p~~--~v~ 89 (417)
.|...+.++++++|++..+. ......+..+|.+++ +.++.|+++|+ +|+++|+++.+.. ... . +.+ ++.
T Consensus 16 ~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilv-s~~~~V~~~d~-~G~~~W~~~~~~~~~~~~~~~~~dG~~lv~ 93 (276)
T 3no2_A 16 KIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILF-SYSKGAKMITR-DGRELWNIAAPAGCEMQTARILPDGNALVA 93 (276)
T ss_dssp EEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEE-ECBSEEEEECT-TSCEEEEEECCTTCEEEEEEECTTSCEEEE
T ss_pred EEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEE-eCCCCEEEECC-CCCEEEEEcCCCCccccccEECCCCCEEEE
Confidence 36677778999999999875 344444445888888 45778999999 9999999998531 111 0 101 111
Q ss_pred eee-eeEEEEEecCCCceeeeeecCCCCCcc---eeeceeEEcCeEEEEeCCccCccccCcccCCCceEEEEeCCCCcee
Q 039692 90 NVT-VAVVVAVSRSNGELVWSTQIDPRPRSQ---ITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRII 165 (417)
Q Consensus 90 ~~~-v~~l~ald~~tG~~~W~~~~~~~~~~~---~~~sp~v~~~~v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~~~ 165 (417)
... -+++++||+ +|+++|++.+....... ........++.+++.... ++.|+++|++ |+++
T Consensus 94 ~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~-------------~~~v~~~d~~-G~~~ 158 (276)
T 3no2_A 94 WCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFA-------------TSEVREIAPN-GQLL 158 (276)
T ss_dssp EESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETT-------------TTEEEEECTT-SCEE
T ss_pred ecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECCCCCEEEEecC-------------CCEEEEECCC-CCEE
Confidence 111 368999996 89999999875331111 111112235555554443 6899999998 9999
Q ss_pred ceeeecCCCCCCCCCCCCccccCCCceeecccCcccCCCCCCCCCCCCcccCCCCCCeEEEEECCCCceEEEecCCCCcc
Q 039692 166 WQTYMLPDNGGKRGGYSGAAVWGSSPAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDI 245 (417)
Q Consensus 166 W~~~~~~~~~~~~~~~~gg~~~~~~pa~d~~~~~~~~~~~~~p~~~~~~v~~~~~~~~l~ald~~tG~~~W~~~~~~~~~ 245 (417)
|++...... + ..+..+ .+..++....++.|+++|++||+++|++.......
T Consensus 159 w~~~~~~~~------------~--~~~~~~---------------~g~~~v~~~~~~~v~~~d~~tG~~~w~~~~~~~~~ 209 (276)
T 3no2_A 159 NSVKLSGTP------------F--SSAFLD---------------NGDCLVACGDAHCFVQLNLESNRIVRRVNANDIEG 209 (276)
T ss_dssp EEEECSSCC------------C--EEEECT---------------TSCEEEECBTTSEEEEECTTTCCEEEEEEGGGSBS
T ss_pred EEEECCCCc------------c--ceeEcC---------------CCCEEEEeCCCCeEEEEeCcCCcEEEEecCCCCCC
Confidence 999873110 0 011111 11223334456789999999999999997432110
Q ss_pred eeeeccCCCCCCCCCCCCCCCccCCCceEEEEecCCeeeeEEEEEcc-----------cceEEEEECCCCcEEEEeecC
Q 039692 246 FYFTCLVPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQK-----------SGFAWAFDRDSGDIIWFKLAG 313 (417)
Q Consensus 246 ~~~~~~~~~~~~c~~~~~~~~~~~~~p~v~~~~~~G~~~~~v~~~~~-----------~G~l~ald~~tG~~lW~~~~~ 313 (417)
..+ .-|.-.....+ +.+|+++. +++++.||+ +|+++|++...
T Consensus 210 ~~l---------------------~~~~~~~~~~~----G~i~v~~~~g~~~~~~~~~~~~~~~~~~-~g~~~W~~~~~ 262 (276)
T 3no2_A 210 VQL---------------------FFVAQLFPLQN----GGLYICNWQGHDREAGKGKHPQLVEIDS-EGKVVWQLNDK 262 (276)
T ss_dssp CCC---------------------SEEEEEEECTT----SCEEEEEECTTCTTGGGSCCCSEEEECT-TSBEEEEECCT
T ss_pred ccc---------------------cccccceEcCC----CCEEEEeccCccccccccCCceEEEECC-CCCEEEEecCc
Confidence 000 00111111123 34566653 446899986 89999999864
No 22
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=99.65 E-value=5.9e-16 Score=148.94 Aligned_cols=187 Identities=16% Similarity=0.127 Sum_probs=119.4
Q ss_pred CCcccCccccccceeeeEEEeCCceeeCcEE-------ECCEEEEe--ccCCcEEEEECCCCccceEeecccccCCccee
Q 039692 16 GEVLINPVTVRNLRLRWSFYAGKDISATPAV-------ANGVVYFP--SWNGYLYAVNAFNGALIWEQNLSKLTGLSGTG 86 (417)
Q Consensus 16 ~~~~i~~~~~~~~~~~W~~~~~~~~~~~p~~-------~~g~v~v~--~~~g~l~ald~~tG~~~W~~~~~~~~~~~p~~ 86 (417)
.+..|.+.+..+|+++|++... ..+.++. .++.+|+. +.+|+|+|||+++|+.+|.+.++..+..+|+-
T Consensus 18 ~dG~l~Ald~~tG~~~W~~~~~--~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~lv~~SP~~ 95 (339)
T 2be1_A 18 VEGGLHAVDRRNGHIIWSIEPE--NFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQLVSTSPLH 95 (339)
T ss_dssp TTSCEEEEETTTTEEEEEECGG--GSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHHHTTCSEE
T ss_pred CCCeEEEEECCCCcEEEEecCC--ccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeeccccceeccccc
Confidence 3445888999999999999987 1111222 24566665 57999999999999999999998766666651
Q ss_pred -----eE-------Eeeee------eEEEEEecCCCceeeeeecCCCCCc---ceeecee-------EEcCeEEEEeCCc
Q 039692 87 -----IV-------VNVTV------AVVVAVSRSNGELVWSTQIDPRPRS---QITMSGS-------VYMGAFYVGLSSL 138 (417)
Q Consensus 87 -----~v-------~~~~v------~~l~ald~~tG~~~W~~~~~~~~~~---~~~~sp~-------v~~~~v~v~~~~~ 138 (417)
++ .++.+ ++|+|||+.||+++|++........ ....+|. ..++.||++..
T Consensus 96 ~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~e~~~~~~d~~~d~~~~~v~ig~~-- 173 (339)
T 2be1_A 96 LKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGPGSKNGYFGSQSVDCSPEEKIKLQECENMIVIGKT-- 173 (339)
T ss_dssp EECC----------CCEEEEECEEEEEEEEEETTTCCEEEEESTTCBCC--------------------CCEEEEEEE--
T ss_pred cCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEecCCCcccccccccccccccccccccCCCeEEEecc--
Confidence 12 34422 9999999999999999997532110 0111222 23577888775
Q ss_pred cCccccCcccCCCceEEEEeCCCCceeceeeecCCCCCCCCCCCCccccCCCceeecccCcccCCCCCCCCCCCCcccCC
Q 039692 139 EEALPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYSGAAVWGSSPAIDVIRRQKQNNQTTKPTHPDQCISSD 218 (417)
Q Consensus 139 ~~~~~~~~~~~~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~~gg~~~~~~pa~d~~~~~~~~~~~~~p~~~~~~v~~~ 218 (417)
+..+.+++ ++|+ +|+++...... .+++.... ...+...++.++..
T Consensus 174 ------------~y~v~~~~-~sG~-~W~~~~s~~~~---------------~~~~~~~~------~~~~~s~Dg~~~~~ 218 (339)
T 2be1_A 174 ------------IFELGIHS-YDGA-SYNVTYSTWQQ---------------NVLDVPLA------LQNTFSKDGMCIAP 218 (339)
T ss_dssp ------------EEECEECC-TTSC-CCCCEEEEEEC---------------CTTTHHHH------TTCSSCSSSCCEEE
T ss_pred ------------eEEEEEEC-CCCC-eEEEecccccc---------------cccccccc------cccccccCCcEEEE
Confidence 35677777 6797 99987632110 01110000 00111233444566
Q ss_pred CCCCeEEEEECCCCceEE-EecCC
Q 039692 219 IYANSIVALDIDSGRIAW-AKPLG 241 (417)
Q Consensus 219 ~~~~~l~ald~~tG~~~W-~~~~~ 241 (417)
..++.|+|||+++|+++| +.+..
T Consensus 219 ~~dg~v~A~d~~~G~~~W~~~~l~ 242 (339)
T 2be1_A 219 FRDKSLLASDLDFRIARWVSPTFP 242 (339)
T ss_dssp ETTTEEEEECSTTCCEEEECCCCS
T ss_pred CCCCEEEEEECCCCcEEEEeecCC
Confidence 778999999999999999 66554
No 23
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.16 E-value=2.7e-08 Score=94.72 Aligned_cols=240 Identities=13% Similarity=0.059 Sum_probs=143.2
Q ss_pred eeeeEEEeCCceeeCcEEE--CCEEEEecc-------CCcEEEEECCCCccceEeecccccCC---ccee--e-EEeeee
Q 039692 29 RLRWSFYAGKDISATPAVA--NGVVYFPSW-------NGYLYAVNAFNGALIWEQNLSKLTGL---SGTG--I-VVNVTV 93 (417)
Q Consensus 29 ~~~W~~~~~~~~~~~p~~~--~g~v~v~~~-------~g~l~ald~~tG~~~W~~~~~~~~~~---~p~~--~-v~~~~v 93 (417)
+..++..++.... .+.+. ++.+|+.+. ++.|+.+|.++|++++++..+..... +|.+ + +.....
T Consensus 32 ~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~ 110 (353)
T 3vgz_A 32 EEMLRKAVGKGAY-EMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHNDLKPFGATINNTTQTLWFGNTVN 110 (353)
T ss_dssp -CEEEEEEESSEE-EEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEESSCCCSEEEETTTTEEEEEETTT
T ss_pred hhhhhhhhccCcc-ceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEecCCCcceEEECCCCCEEEEEecCC
Confidence 3456666655443 23333 358888874 45899999999999999987643211 1110 0 111112
Q ss_pred eEEEEEecCCCceeeeeecCCCCCc----ce-eeceeE--EcCeEEEEeCCccCccccCcccCCCceEEEEeCCCCceec
Q 039692 94 AVVVAVSRSNGELVWSTQIDPRPRS----QI-TMSGSV--YMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIW 166 (417)
Q Consensus 94 ~~l~ald~~tG~~~W~~~~~~~~~~----~~-~~sp~v--~~~~v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~~~W 166 (417)
+.|+.+|.++|+++++.+....... .. .....+ .++.+|+...+ .++.|+.+|.++++.++
T Consensus 111 ~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~------------~~~~i~~~d~~~~~~~~ 178 (353)
T 3vgz_A 111 SAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIG------------KESVIWVVDGGNIKLKT 178 (353)
T ss_dssp TEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEES------------SSCEEEEEETTTTEEEE
T ss_pred CEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecC------------CCceEEEEcCCCCceEE
Confidence 8999999999999999987432110 00 111122 24558877632 14789999999999998
Q ss_pred eeeecCCCCCCCCCCCCccccCCCceeecccCcccCCCCCCCCCCCCcccCCCCCCeEEEEECCCCceEEEecCCCCcce
Q 039692 167 QTYMLPDNGGKRGGYSGAAVWGSSPAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIF 246 (417)
Q Consensus 167 ~~~~~~~~~~~~~~~~gg~~~~~~pa~d~~~~~~~~~~~~~p~~~~~~v~~~~~~~~l~ald~~tG~~~W~~~~~~~~~~ 246 (417)
.++...... ...+++++. ..++....++.++.+|.++|++++.........
T Consensus 179 ~~~~~~~~~-------------~~~~~s~dg---------------~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~- 229 (353)
T 3vgz_A 179 AIQNTGKMS-------------TGLALDSEG---------------KRLYTTNADGELITIDTADNKILSRKKLLDDGK- 229 (353)
T ss_dssp EECCCCTTC-------------CCCEEETTT---------------TEEEEECTTSEEEEEETTTTEEEEEEECCCSSS-
T ss_pred EecCCCCcc-------------ceEEECCCC---------------CEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCC-
Confidence 876321100 123444332 224455567899999999999999887643210
Q ss_pred eeeccCCCCCCCCCCCCCCCccCCCceEEEEecCCeeeeEEEEEc-ccceEEEEECCCCcEEEEeecCCCCCCCcceecc
Q 039692 247 YFTCLVPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQ-KSGFAWAFDRDSGDIIWFKLAGPGGREGGGVWGA 325 (417)
Q Consensus 247 ~~~~~~~~~~~c~~~~~~~~~~~~~p~v~~~~~~G~~~~~v~~~~-~~G~l~ald~~tG~~lW~~~~~~~~~~g~~~~~~ 325 (417)
...+.-..+..+| +.+|+.+ .++.++.+|.++|+++.....+.+ .....
T Consensus 230 ----------------------~~~~~~~~~s~dg---~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~-----~~~~~ 279 (353)
T 3vgz_A 230 ----------------------EHFFINISLDTAR---QRAFITDSKAAEVLVVDTRNGNILAKVAAPES-----LAVLF 279 (353)
T ss_dssp ----------------------CCCEEEEEEETTT---TEEEEEESSSSEEEEEETTTCCEEEEEECSSC-----CCEEE
T ss_pred ----------------------CcccceEEECCCC---CEEEEEeCCCCEEEEEECCCCcEEEEEEcCCC-----ceEEE
Confidence 0112112223344 4566665 458999999999999998886421 11122
Q ss_pred cccCCeEEEEeccCC
Q 039692 326 ATDGRRVYTNIVNND 340 (417)
Q Consensus 326 ~~~~~~vy~~~~~~~ 340 (417)
..+++.+|+.+..++
T Consensus 280 s~dg~~l~v~~~~~~ 294 (353)
T 3vgz_A 280 NPARNEAYVTHRQAG 294 (353)
T ss_dssp ETTTTEEEEEETTTT
T ss_pred CCCCCEEEEEECCCC
Confidence 335566777765433
No 24
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.08 E-value=2.7e-08 Score=94.76 Aligned_cols=243 Identities=13% Similarity=0.128 Sum_probs=150.0
Q ss_pred cCccccccceeeeEEEeCCceeeCcEEE-C-CEEEEecc-CCcEEEEECCCCccceEeecccccC---C---cceee-EE
Q 039692 20 INPVTVRNLRLRWSFYAGKDISATPAVA-N-GVVYFPSW-NGYLYAVNAFNGALIWEQNLSKLTG---L---SGTGI-VV 89 (417)
Q Consensus 20 i~~~~~~~~~~~W~~~~~~~~~~~p~~~-~-g~v~v~~~-~g~l~ald~~tG~~~W~~~~~~~~~---~---~p~~~-v~ 89 (417)
|...+..++++.+++..+... ....+. + ..+|+++. ++.|+.+|.++|++++....+.... . .|..+ +.
T Consensus 71 v~~~d~~~~~~~~~~~~~~~~-~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s 149 (353)
T 3vgz_A 71 VYRLDPVTLEVTQAIHNDLKP-FGATINNTTQTLWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVAD 149 (353)
T ss_dssp EEEECTTTCCEEEEEEESSCC-CSEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEE
T ss_pred EEEEcCCCCeEEEEEecCCCc-ceEEECCCCCEEEEEecCCCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEEC
Confidence 556667778888888876543 233444 3 45887764 6899999999999999998854211 0 01111 11
Q ss_pred -ee---e------eeEEEEEecCCCceeeeeecCCCCCcceeeceeEEcCeEEEEeCCccCccccCcccCCCceEEEEeC
Q 039692 90 -NV---T------VAVVVAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDV 159 (417)
Q Consensus 90 -~~---~------v~~l~ald~~tG~~~W~~~~~~~~~~~~~~sp~v~~~~v~v~~~~~~~~~~~~~~~~~~g~l~ald~ 159 (417)
++ + .+.|+.+|.+++++++..+........+..+| .+..+|+... ++.|+.+|.
T Consensus 150 ~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~--dg~~l~~~~~--------------~~~i~~~d~ 213 (353)
T 3vgz_A 150 DATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGKMSTGLALDS--EGKRLYTTNA--------------DGELITIDT 213 (353)
T ss_dssp TTTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCTTCCCCEEET--TTTEEEEECT--------------TSEEEEEET
T ss_pred CCCCEEEEEecCCCceEEEEcCCCCceEEEecCCCCccceEEECC--CCCEEEEEcC--------------CCeEEEEEC
Confidence 11 1 26799999999999998873222111222233 2445777655 489999999
Q ss_pred CCCceeceeeecCCCCCCCCCCCCccccCCCceeecccCcccCCCCCCCCCCCCcccCC-CCCCeEEEEECCCCceEEEe
Q 039692 160 RNGRIIWQTYMLPDNGGKRGGYSGAAVWGSSPAIDVIRRQKQNNQTTKPTHPDQCISSD-IYANSIVALDIDSGRIAWAK 238 (417)
Q Consensus 160 ~tG~~~W~~~~~~~~~~~~~~~~gg~~~~~~pa~d~~~~~~~~~~~~~p~~~~~~v~~~-~~~~~l~ald~~tG~~~W~~ 238 (417)
++|++++++........ ... ...+++++.. .++.. ...+.++.+|.++|+++...
T Consensus 214 ~~~~~~~~~~~~~~~~~-------~~~--~~~~~s~dg~---------------~l~~~~~~~~~v~~~d~~~~~~~~~~ 269 (353)
T 3vgz_A 214 ADNKILSRKKLLDDGKE-------HFF--INISLDTARQ---------------RAFITDSKAAEVLVVDTRNGNILAKV 269 (353)
T ss_dssp TTTEEEEEEECCCSSSC-------CCE--EEEEEETTTT---------------EEEEEESSSSEEEEEETTTCCEEEEE
T ss_pred CCCeEEEEEEcCCCCCC-------ccc--ceEEECCCCC---------------EEEEEeCCCCEEEEEECCCCcEEEEE
Confidence 99999998876321110 000 0123443322 12222 33588999999999999888
Q ss_pred cCCCCcceeeeccCCCCCCCCCCCCCCCccCCCceEEEEecCCeeeeEEEEEc-ccceEEEEECCCCcEEEEeecCCCCC
Q 039692 239 PLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQ-KSGFAWAFDRDSGDIIWFKLAGPGGR 317 (417)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~p~v~~~~~~G~~~~~v~~~~-~~G~l~ald~~tG~~lW~~~~~~~~~ 317 (417)
+..... ... +..+| +.+|+.+ .++.++.+|.++|+++.....+.
T Consensus 270 ~~~~~~--------------------------~~~---~s~dg---~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~--- 314 (353)
T 3vgz_A 270 AAPESL--------------------------AVL---FNPAR---NEAYVTHRQAGKVSVIDAKSYKVVKTFDTPT--- 314 (353)
T ss_dssp ECSSCC--------------------------CEE---EETTT---TEEEEEETTTTEEEEEETTTTEEEEEEECCS---
T ss_pred EcCCCc--------------------------eEE---ECCCC---CEEEEEECCCCeEEEEECCCCeEEEEEecCC---
Confidence 764321 111 22343 4566665 68999999999999998887531
Q ss_pred CCcceecccccCCeEEEEeccC
Q 039692 318 EGGGVWGAATDGRRVYTNIVNN 339 (417)
Q Consensus 318 ~g~~~~~~~~~~~~vy~~~~~~ 339 (417)
.........+++.+|+.....
T Consensus 315 -~~~~~~~s~dg~~l~v~~~~~ 335 (353)
T 3vgz_A 315 -HPNSLALSADGKTLYVSVKQK 335 (353)
T ss_dssp -EEEEEEECTTSCEEEEEEECC
T ss_pred -CCCeEEEcCCCCEEEEEEccc
Confidence 111112334667788887553
No 25
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.02 E-value=5e-08 Score=93.36 Aligned_cols=228 Identities=13% Similarity=0.123 Sum_probs=135.8
Q ss_pred cCccccccceeeeEEEeCCceeeCcEE-ECCEEEEec-cCCcEEEEECCCCccceEeeccccc--CCcceeeE-Eee--e
Q 039692 20 INPVTVRNLRLRWSFYAGKDISATPAV-ANGVVYFPS-WNGYLYAVNAFNGALIWEQNLSKLT--GLSGTGIV-VNV--T 92 (417)
Q Consensus 20 i~~~~~~~~~~~W~~~~~~~~~~~p~~-~~g~v~v~~-~~g~l~ald~~tG~~~W~~~~~~~~--~~~p~~~v-~~~--~ 92 (417)
|...+..+++++.++..... ....++ .++++|+++ .++.|+.||++++++.++.+++... ...|.++. .++ +
T Consensus 66 v~viD~~t~~~~~~i~~~~~-p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~~~~~ly 144 (328)
T 3dsm_A 66 IFAIDINTFKEVGRITGFTS-PRYIHFLSDEKAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQYGKYVY 144 (328)
T ss_dssp EEEEETTTCCEEEEEECCSS-EEEEEEEETTEEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEEETTEEE
T ss_pred EEEEECcccEEEEEcCCCCC-CcEEEEeCCCeEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEEECCEEE
Confidence 55556677787777653322 223344 688999998 7899999999999999998876511 01233322 222 1
Q ss_pred ------eeEEEEEecCCCceeeeeecCCCCCcceeeceeEEcCeEEEEeCCccCccccCcccCCCceEEEEeCCCCceec
Q 039692 93 ------VAVVVAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIW 166 (417)
Q Consensus 93 ------v~~l~ald~~tG~~~W~~~~~~~~~~~~~~sp~v~~~~v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~~~W 166 (417)
.+.|..+|.++++++++.+....+. .+...| ++++|+...+....... ....+.|+.+|++|++++.
T Consensus 145 v~~~~~~~~v~viD~~t~~~~~~i~~g~~p~-~i~~~~---dG~l~v~~~~~~~~~~~---~~~~~~v~~id~~t~~v~~ 217 (328)
T 3dsm_A 145 VNCWSYQNRILKIDTETDKVVDELTIGIQPT-SLVMDK---YNKMWTITDGGYEGSPY---GYEAPSLYRIDAETFTVEK 217 (328)
T ss_dssp EEECTTCCEEEEEETTTTEEEEEEECSSCBC-CCEECT---TSEEEEEBCCBCTTCSS---CBCCCEEEEEETTTTEEEE
T ss_pred EEcCCCCCEEEEEECCCCeEEEEEEcCCCcc-ceEEcC---CCCEEEEECCCccCCcc---ccCCceEEEEECCCCeEEE
Confidence 2679999999999999988654322 233333 68899887642110000 0002689999999999887
Q ss_pred eeeecCCCCCCCCCCCCccccCCCceeecccCcccCCCCCCCCCCCCcccCCCCCCeEEEEECCCCceEEEecCCCCcce
Q 039692 167 QTYMLPDNGGKRGGYSGAAVWGSSPAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIF 246 (417)
Q Consensus 167 ~~~~~~~~~~~~~~~~gg~~~~~~pa~d~~~~~~~~~~~~~p~~~~~~v~~~~~~~~l~ald~~tG~~~W~~~~~~~~~~ 246 (417)
++..... .. . ...+++++.. .+|.... .++.+|+++|++.- ...-...
T Consensus 218 ~~~~~~g-~~---------p--~~la~~~d~~---------------~lyv~~~--~v~~~d~~t~~~~~-~~~~~~~-- 265 (328)
T 3dsm_A 218 QFKFKLG-DW---------P--SEVQLNGTRD---------------TLYWINN--DIWRMPVEADRVPV-RPFLEFR-- 265 (328)
T ss_dssp EEECCTT-CC---------C--EEEEECTTSC---------------EEEEESS--SEEEEETTCSSCCS-SCSBCCC--
T ss_pred EEecCCC-CC---------c--eeEEEecCCC---------------EEEEEcc--EEEEEECCCCceee-eeeecCC--
Confidence 7665211 00 0 1234443222 2333222 78899999888631 1100000
Q ss_pred eeeccCCCCCCCCCCCCCCCccCCCceEEEEecCCeeeeEEEEEc-----ccceEEEEECCCCcEEEEeecC
Q 039692 247 YFTCLVPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQ-----KSGFAWAFDRDSGDIIWFKLAG 313 (417)
Q Consensus 247 ~~~~~~~~~~~c~~~~~~~~~~~~~p~v~~~~~~G~~~~~v~~~~-----~~G~l~ald~~tG~~lW~~~~~ 313 (417)
...|--..+..+ ++.||+++ .++.|+++|++ |+++|+.+.+
T Consensus 266 ----------------------~~~p~gi~vdp~---~g~lyva~~~~y~~~~~V~v~d~~-g~~~~~i~~G 311 (328)
T 3dsm_A 266 ----------------------DTKYYGLTVNPN---NGEVYVADAIDYQQQGIVYRYSPQ-GKLIDEFYVG 311 (328)
T ss_dssp ----------------------SSCEEEEEECTT---TCCEEEEECTTSSSEEEEEEECTT-CCEEEEEEEE
T ss_pred ----------------------CCceEEEEEcCC---CCeEEEEcccccccCCEEEEECCC-CCEEEEEEec
Confidence 012322222222 24567664 57899999998 9999999874
No 26
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=98.97 E-value=2.2e-07 Score=88.83 Aligned_cols=224 Identities=12% Similarity=0.052 Sum_probs=130.8
Q ss_pred cEEECCEEEEecc-CCcEEEEECCCCccceEeecccccCCcceeeE--Eee--e-----eeEEEEEecCCCceeeeeecC
Q 039692 44 PAVANGVVYFPSW-NGYLYAVNAFNGALIWEQNLSKLTGLSGTGIV--VNV--T-----VAVVVAVSRSNGELVWSTQID 113 (417)
Q Consensus 44 p~~~~g~v~v~~~-~g~l~ald~~tG~~~W~~~~~~~~~~~p~~~v--~~~--~-----v~~l~ald~~tG~~~W~~~~~ 113 (417)
.++.++++|+.+. ++.|..+|++||+++.++... ..|..+. .++ + .+.|+.+|++++++.++.++.
T Consensus 49 i~~~~~~lyv~~~~~~~v~viD~~t~~~~~~i~~~----~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g 124 (328)
T 3dsm_A 49 MVIRDGIGWIVVNNSHVIFAIDINTFKEVGRITGF----TSPRYIHFLSDEKAYVTQIWDYRIFIINPKTYEITGYIECP 124 (328)
T ss_dssp EEEETTEEEEEEGGGTEEEEEETTTCCEEEEEECC----SSEEEEEEEETTEEEEEEBSCSEEEEEETTTTEEEEEEECT
T ss_pred EEEECCEEEEEEcCCCEEEEEECcccEEEEEcCCC----CCCcEEEEeCCCeEEEEECCCCeEEEEECCCCeEEEEEEcC
Confidence 4567999998875 588999999999999988532 2243322 122 1 278999999999999998875
Q ss_pred CCCC-cceeeceeEEcCeEEEEeCCccCccccCcccCCCceEEEEeCCCCceeceeeecCCCCCCCCCCCCccccCCCce
Q 039692 114 PRPR-SQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYSGAAVWGSSPA 192 (417)
Q Consensus 114 ~~~~-~~~~~sp~v~~~~v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~~gg~~~~~~pa 192 (417)
.... .......++.++++|+...+ .++.|..+|++|++++++.+...... ..+
T Consensus 125 ~~~~~~~~p~~i~~~~~~lyv~~~~------------~~~~v~viD~~t~~~~~~i~~g~~p~--------------~i~ 178 (328)
T 3dsm_A 125 DMDMESGSTEQMVQYGKYVYVNCWS------------YQNRILKIDTETDKVVDELTIGIQPT--------------SLV 178 (328)
T ss_dssp TCCTTTCBCCCEEEETTEEEEEECT------------TCCEEEEEETTTTEEEEEEECSSCBC--------------CCE
T ss_pred CccccCCCcceEEEECCEEEEEcCC------------CCCEEEEEECCCCeEEEEEEcCCCcc--------------ceE
Confidence 4100 00111223468899998641 14789999999999999887632110 123
Q ss_pred eecccCcccCCCCCCCCCCCCcccCCCCCCeEEEEECCCCceEEEecCCCCcceeeeccCCCCCCCCCCCCCCCccCCCc
Q 039692 193 IDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAP 272 (417)
Q Consensus 193 ~d~~~~~~~~~~~~~p~~~~~~v~~~~~~~~l~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~p 272 (417)
++++......... . .+...+ ....+.|+.+|+++++++.+...+... .|
T Consensus 179 ~~~dG~l~v~~~~-~---~~~~~~-~~~~~~v~~id~~t~~v~~~~~~~~g~--------------------------~p 227 (328)
T 3dsm_A 179 MDKYNKMWTITDG-G---YEGSPY-GYEAPSLYRIDAETFTVEKQFKFKLGD--------------------------WP 227 (328)
T ss_dssp ECTTSEEEEEBCC-B---CTTCSS-CBCCCEEEEEETTTTEEEEEEECCTTC--------------------------CC
T ss_pred EcCCCCEEEEECC-C---ccCCcc-ccCCceEEEEECCCCeEEEEEecCCCC--------------------------Cc
Confidence 3332111000000 0 000000 001378999999999998776653211 12
Q ss_pred eEEEEecCCeeeeEEEEEcccceEEEEECCCCcEEEEeecCCCCCCCcceecccc--cCCeEEEEe
Q 039692 273 MLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDIIWFKLAGPGGREGGGVWGAAT--DGRRVYTNI 336 (417)
Q Consensus 273 ~v~~~~~~G~~~~~v~~~~~~G~l~ald~~tG~~lW~~~~~~~~~~g~~~~~~~~--~~~~vy~~~ 336 (417)
.-..+..+ ++.+|+.+. .++.+|.++|++.-..... ..+....++++ +++.+|+.+
T Consensus 228 ~~la~~~d---~~~lyv~~~--~v~~~d~~t~~~~~~~~~~---~~~~~p~gi~vdp~~g~lyva~ 285 (328)
T 3dsm_A 228 SEVQLNGT---RDTLYWINN--DIWRMPVEADRVPVRPFLE---FRDTKYYGLTVNPNNGEVYVAD 285 (328)
T ss_dssp EEEEECTT---SCEEEEESS--SEEEEETTCSSCCSSCSBC---CCSSCEEEEEECTTTCCEEEEE
T ss_pred eeEEEecC---CCEEEEEcc--EEEEEECCCCceeeeeeec---CCCCceEEEEEcCCCCeEEEEc
Confidence 22222223 457888765 8999999999874111111 00122334454 467788876
No 27
>3hx6_A Type 4 fimbrial biogenesis protein PILY1; beta propeller, pilus protein, cell adhesion; 2.10A {Pseudomonas aeruginosa}
Probab=98.60 E-value=2.2e-06 Score=86.53 Aligned_cols=171 Identities=14% Similarity=0.187 Sum_probs=98.5
Q ss_pred CCCeEEEEECCC---CceEEEecCCCCcceeeeccCCCCCCCCCCCCCCCccCCCceEEEEecCCeeeeEEEEEcc----
Q 039692 220 YANSIVALDIDS---GRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQK---- 292 (417)
Q Consensus 220 ~~~~l~ald~~t---G~~~W~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~p~v~~~~~~G~~~~~v~~~~~---- 292 (417)
....+||||..+ .+++|++........ . -.-+.|+|..+. +| +-++++++.
T Consensus 162 GG~~~yALDVT~P~~p~~LWe~~~~~~~~L--G-----------------~t~s~P~I~~~~-~g--~w~~vfG~GY~~~ 219 (570)
T 3hx6_A 162 GGKGLFALDVTDPANIKLLWEIGVDQEPDL--G-----------------YSFPKPTVARLH-NG--KWAVVTGNGYSSM 219 (570)
T ss_dssp SCSEEEEEECSSGGGCEEEEEEETTTCTTC--C-----------------BCCSCCEEEECT-TS--SEEEEEECCBSCT
T ss_pred CCcEEEEEECCCCCCCceeEEECCCCcccc--C-----------------ccccCCEEEEec-CC--CEEEEEccccCCC
Confidence 445799999876 889999984332110 0 012689998664 44 345555542
Q ss_pred --cceEEEEECCCCcEEEEeecCCCCCCCcceeccc-cc--C----CeEEEEeccCCceeeeecCCCCCCC-ccc-----
Q 039692 293 --SGFAWAFDRDSGDIIWFKLAGPGGREGGGVWGAA-TD--G----RRVYTNIVNNDRIIWSTADPSNETA-HGP----- 357 (417)
Q Consensus 293 --~G~l~ald~~tG~~lW~~~~~~~~~~g~~~~~~~-~~--~----~~vy~~~~~~~~~~W~~~~~~~~~~-~~p----- 357 (417)
...||+||+++|+++|+...+...........++ +| . +.+|+.|..+. +|+.++...... ..|
T Consensus 220 ~~~~~Lyv~d~~tG~li~~i~~~~~~~~~~Gls~~~~~D~d~Dg~~D~~YaGDl~Gn--lWRfDl~~~~~~~~~~~~~~~ 297 (570)
T 3hx6_A 220 NDKAALLIIDMETGAITRKLEVTGRTGVPNGLSSPRLADNNSDGVADYAYAGDLQGN--LWRFDLIAGKVNQDDPFSRAN 297 (570)
T ss_dssp TCCEEEEEEETTTCCEEEEEEECCSTTSCCCEEEEEEECTTSSSBCCEEEEEETTSE--EEEEECSCSSCCTTSTTCCTT
T ss_pred CCccEEEEEECCCCceEEEEecCCCCccCCccccceEEecCCCCceeEEEEEeCCCc--EEEEEcCCCCccccccccccc
Confidence 4689999999999999998742111111112232 22 1 57999987665 899887642110 000
Q ss_pred --------eee--eCCeEEeccC-CCCCCeeccccccc---C--C-eEEEecCeeeeccCCCCCCCCCCEEEEE
Q 039692 358 --------VTV--VNGVLFAGSV-SANGSTVYGGVPAS---Y--G-CIYLGNGYTVSLGKFHPTWTPGTSLYAF 414 (417)
Q Consensus 358 --------~~~--~~~~v~~~~~-~g~g~~~~~sp~~~---~--g-~lyv~~~~~~~~~~~~~~~~~~~~~~~~ 414 (417)
..+ ....+|.+.. .+....+.+.|++. . + .||+|+|--....+....-....++|.+
T Consensus 298 ~~~~~~s~w~v~~~~~plf~a~d~~g~~QPITaaP~v~~~~~~~g~~V~FGTG~yl~~~D~~~~~~~~Qs~YGI 371 (570)
T 3hx6_A 298 DGPAVASSFRVSFGGQPLYSAVDSAGAAQAITAAPSLVRHPTRKGYIVIFGTGKYFENADARADTSRAQTLYGI 371 (570)
T ss_dssp CSGGGGGGCEESGGGCCSEECBCTTSCBCCCCSCCEEEECTTSSSEEEEEECCCCCSGGGGSCCCSSCCEEEEE
T ss_pred ccccccccceeccCCcceEEEecCCCCCCCEEcCceEEEcCCCCcEEEEEecCccccccccccCCCccEEEEEE
Confidence 000 1223555432 23356777888876 2 2 4577888666544432222345688875
No 28
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=98.57 E-value=3.2e-05 Score=72.42 Aligned_cols=131 Identities=14% Similarity=0.156 Sum_probs=85.1
Q ss_pred cCccccccceeeeEEEeCCc--eeeCcEEE-CC-EEEEec-cCCcEEEEECCCCccceEeeccc------cc---CCcce
Q 039692 20 INPVTVRNLRLRWSFYAGKD--ISATPAVA-NG-VVYFPS-WNGYLYAVNAFNGALIWEQNLSK------LT---GLSGT 85 (417)
Q Consensus 20 i~~~~~~~~~~~W~~~~~~~--~~~~p~~~-~g-~v~v~~-~~g~l~ald~~tG~~~W~~~~~~------~~---~~~p~ 85 (417)
|...+..++++.+++..+.. ....+.+. ++ .+|+++ .++.|+.+|+++|+++++...+. .. ..+|.
T Consensus 13 v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~s~d 92 (337)
T 1pby_B 13 LVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPD 92 (337)
T ss_dssp EEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEEECTTCEEECTT
T ss_pred EEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCcccccccccceEECCC
Confidence 55666778888888887662 12233343 44 677765 46899999999999999887643 11 11222
Q ss_pred e--e-EEe-e----------eeeEEEEEecCCCceeeeeecCCCCCcceeeceeEEcCe-EEEEeCCccCccccCcccCC
Q 039692 86 G--I-VVN-V----------TVAVVVAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGA-FYVGLSSLEEALPADQCCTF 150 (417)
Q Consensus 86 ~--~-v~~-~----------~v~~l~ald~~tG~~~W~~~~~~~~~~~~~~sp~v~~~~-v~v~~~~~~~~~~~~~~~~~ 150 (417)
+ + +.. + ..+.|+.+|.+++++++..+...... .+..+| ++. +|+. .
T Consensus 93 g~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~~-~~~~s~---dg~~l~~~-~-------------- 153 (337)
T 1pby_B 93 GKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAPRQIT-MLAWAR---DGSKLYGL-G-------------- 153 (337)
T ss_dssp SSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEECCSSCC-CEEECT---TSSCEEEE-S--------------
T ss_pred CCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeCCCCcc-eeEECC---CCCEEEEe-C--------------
Confidence 1 1 111 0 12789999999999999888643321 123333 444 7766 2
Q ss_pred CceEEEEeCCCCceeceeee
Q 039692 151 RGSLAKLDVRNGRIIWQTYM 170 (417)
Q Consensus 151 ~g~l~ald~~tG~~~W~~~~ 170 (417)
+.|+.+|.++|+++..+..
T Consensus 154 -~~i~~~d~~~~~~~~~~~~ 172 (337)
T 1pby_B 154 -RDLHVMDPEAGTLVEDKPI 172 (337)
T ss_dssp -SSEEEEETTTTEEEEEECS
T ss_pred -CeEEEEECCCCcEeeeeec
Confidence 5799999999998877654
No 29
>3hx6_A Type 4 fimbrial biogenesis protein PILY1; beta propeller, pilus protein, cell adhesion; 2.10A {Pseudomonas aeruginosa}
Probab=98.55 E-value=5.7e-07 Score=90.70 Aligned_cols=188 Identities=17% Similarity=0.199 Sum_probs=105.5
Q ss_pred CEEEEeccCCcEEEEECCCCccceEeecccccCCcceeeEEeee---------eeEEEEEecCCCceeeeeecCCCCCcc
Q 039692 49 GVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTGLSGTGIVVNVT---------VAVVVAVSRSNGELVWSTQIDPRPRSQ 119 (417)
Q Consensus 49 g~v~v~~~~g~l~ald~~tG~~~W~~~~~~~~~~~p~~~v~~~~---------v~~l~ald~~tG~~~W~~~~~~~~~~~ 119 (417)
.+||+++.+|.|||||+. |+++|.+-....+..... +....+ .+.....|...+. .|
T Consensus 86 ~~VyvGaNDGmLHaF~a~-G~E~wAfiP~~~l~~L~~-l~~~~y~~~~h~Y~VDG~p~~~Dv~~~g-~w----------- 151 (570)
T 3hx6_A 86 PRVYVGANDGMLHGFDTD-GNETFAFIPSAVFEKMHK-LTARGYQGGAHQFYVDGSPVVADAFFGG-AW----------- 151 (570)
T ss_dssp CEEEEECSSSCEEECCSS-CCCCEEECCHHHHHHCC--------CCHHHHHHHHCCCEEEEEEETT-EE-----------
T ss_pred cEEEEECCCceEEEECCC-CcEEEEECCHHHHHHHHH-HhccCccccCcceecCCCCEEEEEEeCC-cc-----------
Confidence 589999999999999997 999999876643210000 000000 0111111111000 11
Q ss_pred eeeceeEEcCeEEEEeCCccCccccCcccCCCceEEEEeCCC---CceeceeeecCCCCCCCCCCCCccccCCCceeecc
Q 039692 120 ITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRN---GRIIWQTYMLPDNGGKRGGYSGAAVWGSSPAIDVI 196 (417)
Q Consensus 120 ~~~sp~v~~~~v~v~~~~~~~~~~~~~~~~~~g~l~ald~~t---G~~~W~~~~~~~~~~~~~~~~gg~~~~~~pa~d~~ 196 (417)
..++++..... ...+||||..+ .+.+|++..... ... |-.|+ .|.+-.-
T Consensus 152 ---------rtvLvggmg~G-----------G~~~yALDVT~P~~p~~LWe~~~~~~--~~L-----G~t~s-~P~I~~~ 203 (570)
T 3hx6_A 152 ---------HTVLIGSLRAG-----------GKGLFALDVTDPANIKLLWEIGVDQE--PDL-----GYSFP-KPTVARL 203 (570)
T ss_dssp ---------EEEEEEECTTS-----------CSEEEEEECSSGGGCEEEEEEETTTC--TTC-----CBCCS-CCEEEEC
T ss_pred ---------eEEEEEecCCC-----------CcEEEEEECCCCCCCceeEEECCCCc--ccc-----Ccccc-CCEEEEe
Confidence 12344433211 25899999865 889999984211 111 22342 3554432
Q ss_pred cCcccCCCCCCCC--CCCCcccCCCCCCeEEEEECCCCceEEEecCCCCcceeeeccCCCCCCCCCCCCCCCccCCCceE
Q 039692 197 RRQKQNNQTTKPT--HPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPML 274 (417)
Q Consensus 197 ~~~~~~~~~~~p~--~~~~~v~~~~~~~~l~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~p~v 274 (417)
.. .+++ +..++- .......||.+|++||+++|++....... ..+..++|.+
T Consensus 204 ~~-------g~w~~vfG~GY~-~~~~~~~Lyv~d~~tG~li~~i~~~~~~~-------------------~~~Gls~~~~ 256 (570)
T 3hx6_A 204 HN-------GKWAVVTGNGYS-SMNDKAALLIIDMETGAITRKLEVTGRTG-------------------VPNGLSSPRL 256 (570)
T ss_dssp TT-------SSEEEEEECCBS-CTTCCEEEEEEETTTCCEEEEEEECCSTT-------------------SCCCEEEEEE
T ss_pred cC-------CCEEEEEccccC-CCCCccEEEEEECCCCceEEEEecCCCCc-------------------cCCccccceE
Confidence 21 0000 000000 01224589999999999999987652210 0012256777
Q ss_pred EEEecCCeeeeEEEEEcccceEEEEECCCCcE
Q 039692 275 LTISTNGRFRDVVVAVQKSGFAWAFDRDSGDI 306 (417)
Q Consensus 275 ~~~~~~G~~~~~v~~~~~~G~l~ald~~tG~~ 306 (417)
+|...||. -+.+|+++..|.|+.||..+...
T Consensus 257 ~D~d~Dg~-~D~~YaGDl~GnlWRfDl~~~~~ 287 (570)
T 3hx6_A 257 ADNNSDGV-ADYAYAGDLQGNLWRFDLIAGKV 287 (570)
T ss_dssp ECTTSSSB-CCEEEEEETTSEEEEEECSCSSC
T ss_pred EecCCCCc-eeEEEEEeCCCcEEEEEcCCCCc
Confidence 76656665 57899999999999999988654
No 30
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=98.55 E-value=1.2e-05 Score=77.57 Aligned_cols=217 Identities=11% Similarity=0.124 Sum_probs=134.3
Q ss_pred cCccccccceeeeEEEeCCceeeCcEEE-CC-EEEEec-cCCcEEEEECCCCccceEeecccccC---Cccee--eEEee
Q 039692 20 INPVTVRNLRLRWSFYAGKDISATPAVA-NG-VVYFPS-WNGYLYAVNAFNGALIWEQNLSKLTG---LSGTG--IVVNV 91 (417)
Q Consensus 20 i~~~~~~~~~~~W~~~~~~~~~~~p~~~-~g-~v~v~~-~~g~l~ald~~tG~~~W~~~~~~~~~---~~p~~--~v~~~ 91 (417)
|...+..++++...+.....+. ...+. ++ .+|+++ .++.|+.+|.++|++++....+..+. .+|.+ ++..+
T Consensus 14 v~v~d~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~ 92 (391)
T 1l0q_A 14 ISVIDVTSNKVTATIPVGSNPM-GAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGSSPQGVAVSPDGKQVYVTN 92 (391)
T ss_dssp EEEEETTTTEEEEEEECSSSEE-EEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEE
T ss_pred EEEEECCCCeEEEEeecCCCcc-eEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECCCCccceEECCCCCEEEEEE
Confidence 5566677788888777665542 23333 44 576554 78999999999999999888765221 11211 11111
Q ss_pred -eeeEEEEEecCCCceeeeeecCCCCCcceeeceeEEcCeEEEEeCCccCccccCcccCCCceEEEEeCCCCceeceeee
Q 039692 92 -TVAVVVAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYM 170 (417)
Q Consensus 92 -~v~~l~ald~~tG~~~W~~~~~~~~~~~~~~sp~v~~~~v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~~~W~~~~ 170 (417)
..+.|+.+|.++|+.+......... ..+..+| .+..+|+.... ++.|+.+|.++|+.+..+..
T Consensus 93 ~~~~~v~v~d~~~~~~~~~~~~~~~~-~~~~~s~--dg~~l~~~~~~-------------~~~v~~~d~~~~~~~~~~~~ 156 (391)
T 1l0q_A 93 MASSTLSVIDTTSNTVAGTVKTGKSP-LGLALSP--DGKKLYVTNNG-------------DKTVSVINTVTKAVINTVSV 156 (391)
T ss_dssp TTTTEEEEEETTTTEEEEEEECSSSE-EEEEECT--TSSEEEEEETT-------------TTEEEEEETTTTEEEEEEEC
T ss_pred CCCCEEEEEECCCCeEEEEEeCCCCc-ceEEECC--CCCEEEEEeCC-------------CCEEEEEECCCCcEEEEEec
Confidence 1288999999999998887754321 1122222 13346555443 68999999999999887765
Q ss_pred cCCCCCCCCCCCCccccCCCceeecccCcccCCCCCCCCCCCCcc-cCCCCCCeEEEEECCCCceEEEecCCCCcceeee
Q 039692 171 LPDNGGKRGGYSGAAVWGSSPAIDVIRRQKQNNQTTKPTHPDQCI-SSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFT 249 (417)
Q Consensus 171 ~~~~~~~~~~~~gg~~~~~~pa~d~~~~~~~~~~~~~p~~~~~~v-~~~~~~~~l~ald~~tG~~~W~~~~~~~~~~~~~ 249 (417)
... . ...++.++. ..+ .....++.++.+|.++++.+........
T Consensus 157 ~~~------------~--~~~~~~~dg---------------~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~------ 201 (391)
T 1l0q_A 157 GRS------------P--KGIAVTPDG---------------TKVYVANFDSMSISVIDTVTNSVIDTVKVEAA------ 201 (391)
T ss_dssp CSS------------E--EEEEECTTS---------------SEEEEEETTTTEEEEEETTTTEEEEEEECSSE------
T ss_pred CCC------------c--ceEEECCCC---------------CEEEEEeCCCCEEEEEECCCCeEEEEEecCCC------
Confidence 210 0 012222221 122 2335568899999999998876654221
Q ss_pred ccCCCCCCCCCCCCCCCccCCCceEEEEecCCeeeeEEEEEc---ccceEEEEECCCCcEEEEeecC
Q 039692 250 CLVPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQ---KSGFAWAFDRDSGDIIWFKLAG 313 (417)
Q Consensus 250 ~~~~~~~~c~~~~~~~~~~~~~p~v~~~~~~G~~~~~v~~~~---~~G~l~ald~~tG~~lW~~~~~ 313 (417)
+.-..+..+| +.+++++ .++.++.+|.++++.+......
T Consensus 202 ----------------------~~~~~~~~~g---~~l~~~~~~~~~~~v~~~d~~~~~~~~~~~~~ 243 (391)
T 1l0q_A 202 ----------------------PSGIAVNPEG---TKAYVTNVDKYFNTVSMIDTGTNKITARIPVG 243 (391)
T ss_dssp ----------------------EEEEEECTTS---SEEEEEEECSSCCEEEEEETTTTEEEEEEECC
T ss_pred ----------------------ccceEECCCC---CEEEEEecCcCCCcEEEEECCCCeEEEEEecC
Confidence 1111222333 4666665 6899999999999988877653
No 31
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=98.51 E-value=4.5e-05 Score=73.52 Aligned_cols=187 Identities=12% Similarity=0.108 Sum_probs=117.9
Q ss_pred EEEEe-ccCCcEEEEECCCCccceEeecccccC---Cccee--e-EEeeeeeEEEEEecCCCceeeeeecCCCCCcceee
Q 039692 50 VVYFP-SWNGYLYAVNAFNGALIWEQNLSKLTG---LSGTG--I-VVNVTVAVVVAVSRSNGELVWSTQIDPRPRSQITM 122 (417)
Q Consensus 50 ~v~v~-~~~g~l~ald~~tG~~~W~~~~~~~~~---~~p~~--~-v~~~~v~~l~ald~~tG~~~W~~~~~~~~~~~~~~ 122 (417)
.+|+. +.++.|+.+|.++|+++..+....... .+|.+ + +.....+.|+.+|.++|++++........ ..+..
T Consensus 3 ~l~vs~~~d~~v~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~~v-~~~~~ 81 (391)
T 1l0q_A 3 FAYIANSESDNISVIDVTSNKVTATIPVGSNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGSSP-QGVAV 81 (391)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSSSE-EEEEE
T ss_pred EEEEEcCCCCEEEEEECCCCeEEEEeecCCCcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECCCCc-cceEE
Confidence 34544 568999999999999999887664321 12211 1 11113389999999999999988865421 11222
Q ss_pred ceeEEcCeEEEEeCCccCccccCcccCCCceEEEEeCCCCceeceeeecCCCCCCCCCCCCccccCCCceeecccCcccC
Q 039692 123 SGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYSGAAVWGSSPAIDVIRRQKQN 202 (417)
Q Consensus 123 sp~v~~~~v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~~gg~~~~~~pa~d~~~~~~~~ 202 (417)
+| .+..+++.... ++.|+.+|.++|+.+..+..... . ...++.++.
T Consensus 82 sp--dg~~l~~~~~~-------------~~~v~v~d~~~~~~~~~~~~~~~------------~--~~~~~s~dg----- 127 (391)
T 1l0q_A 82 SP--DGKQVYVTNMA-------------SSTLSVIDTTSNTVAGTVKTGKS------------P--LGLALSPDG----- 127 (391)
T ss_dssp CT--TSSEEEEEETT-------------TTEEEEEETTTTEEEEEEECSSS------------E--EEEEECTTS-----
T ss_pred CC--CCCEEEEEECC-------------CCEEEEEECCCCeEEEEEeCCCC------------c--ceEEECCCC-----
Confidence 22 13457666543 58999999999999877664210 0 012332221
Q ss_pred CCCCCCCCCCCcc-cCCCCCCeEEEEECCCCceEEEecCCCCcceeeeccCCCCCCCCCCCCCCCccCCCceEEEEecCC
Q 039692 203 NQTTKPTHPDQCI-SSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTISTNG 281 (417)
Q Consensus 203 ~~~~~p~~~~~~v-~~~~~~~~l~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~p~v~~~~~~G 281 (417)
..+ +....++.++.+|.++|+.+........ |.-.....+|
T Consensus 128 ----------~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~----------------------------~~~~~~~~dg 169 (391)
T 1l0q_A 128 ----------KKLYVTNNGDKTVSVINTVTKAVINTVSVGRS----------------------------PKGIAVTPDG 169 (391)
T ss_dssp ----------SEEEEEETTTTEEEEEETTTTEEEEEEECCSS----------------------------EEEEEECTTS
T ss_pred ----------CEEEEEeCCCCEEEEEECCCCcEEEEEecCCC----------------------------cceEEECCCC
Confidence 112 2345578999999999999887765422 1112223344
Q ss_pred eeeeEE-EEEcccceEEEEECCCCcEEEEeec
Q 039692 282 RFRDVV-VAVQKSGFAWAFDRDSGDIIWFKLA 312 (417)
Q Consensus 282 ~~~~~v-~~~~~~G~l~ald~~tG~~lW~~~~ 312 (417)
+.+ +....++.++.+|..+++.+.....
T Consensus 170 ---~~l~~~~~~~~~v~~~d~~~~~~~~~~~~ 198 (391)
T 1l0q_A 170 ---TKVYVANFDSMSISVIDTVTNSVIDTVKV 198 (391)
T ss_dssp ---SEEEEEETTTTEEEEEETTTTEEEEEEEC
T ss_pred ---CEEEEEeCCCCEEEEEECCCCeEEEEEec
Confidence 345 4557789999999999988877664
No 32
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=98.49 E-value=2.5e-05 Score=77.12 Aligned_cols=222 Identities=12% Similarity=0.018 Sum_probs=138.3
Q ss_pred EEECCEEEEeccCCcEEEEECCCCccceEeecccc-cCC---cceeeEEeeeeeEEEEEecCCCceeeeeecCCCCCcce
Q 039692 45 AVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKL-TGL---SGTGIVVNVTVAVVVAVSRSNGELVWSTQIDPRPRSQI 120 (417)
Q Consensus 45 ~~~~g~v~v~~~~g~l~ald~~tG~~~W~~~~~~~-~~~---~p~~~v~~~~v~~l~ald~~tG~~~W~~~~~~~~~~~~ 120 (417)
...++.++.++.++.|..+|.++|+.+.++..... +.+ .+..++.....+.+..+|..+++.++....... .+
T Consensus 166 ~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~---~v 242 (445)
T 2ovr_B 166 QMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVA---AV 242 (445)
T ss_dssp EEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEESSSCCEEEEEECCSS---CE
T ss_pred EecCCEEEEEeCCCeEEEEECCcCcEEEEECCCCCcEEEEEecCCEEEEEeCCCEEEEEECCCCcEEEEEcCCcc---cE
Confidence 34577888889999999999999998877764321 110 000011111238999999999999888774322 12
Q ss_pred eeceeEEcCeEEEEeCCccCccccCcccCCCceEEEEeCCCCceeceeeecCCCCCCCCCCCCccccCCCceeecccCcc
Q 039692 121 TMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYSGAAVWGSSPAIDVIRRQK 200 (417)
Q Consensus 121 ~~sp~v~~~~v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~~gg~~~~~~pa~d~~~~~~ 200 (417)
.+ ....+..++++.. ++.|..+|.++++.+.++..... .+. ...++
T Consensus 243 ~~-~~~~~~~l~~~~~--------------dg~i~iwd~~~~~~~~~~~~~~~-----------~v~--~~~~~------ 288 (445)
T 2ovr_B 243 RC-VQYDGRRVVSGAY--------------DFMVKVWDPETETCLHTLQGHTN-----------RVY--SLQFD------ 288 (445)
T ss_dssp EE-EEECSSCEEEEET--------------TSCEEEEEGGGTEEEEEECCCSS-----------CEE--EEEEC------
T ss_pred EE-EEECCCEEEEEcC--------------CCEEEEEECCCCcEeEEecCCCC-----------ceE--EEEEC------
Confidence 21 1223455666655 68999999999998887653211 010 11121
Q ss_pred cCCCCCCCCCCCCcccCCCCCCeEEEEECCCCceEEEecCCCCcceeeeccCCCCCCCCCCCCCCCccCCCceEEEEecC
Q 039692 201 QNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTISTN 280 (417)
Q Consensus 201 ~~~~~~~p~~~~~~v~~~~~~~~l~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~p~v~~~~~~ 280 (417)
...+..+..++.+..+|.++++.+..+...... +..+..+
T Consensus 289 -----------~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~-----------------------------v~~~~~~ 328 (445)
T 2ovr_B 289 -----------GIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSL-----------------------------TSGMELK 328 (445)
T ss_dssp -----------SSEEEEEETTSCEEEEETTTCCEEEEECCCCSC-----------------------------EEEEEEE
T ss_pred -----------CCEEEEEeCCCeEEEEECCCCCEEEEEcCCccc-----------------------------EEEEEEe
Confidence 123445567889999999999998877643221 1111122
Q ss_pred CeeeeEEEEEcccceEEEEECCCCcEEEEeecCCCCCCCcceecccccCCeEEEEeccCCceeeeecC
Q 039692 281 GRFRDVVVAVQKSGFAWAFDRDSGDIIWFKLAGPGGREGGGVWGAATDGRRVYTNIVNNDRIIWSTAD 348 (417)
Q Consensus 281 G~~~~~v~~~~~~G~l~ald~~tG~~lW~~~~~~~~~~g~~~~~~~~~~~~vy~~~~~~~~~~W~~~~ 348 (417)
++.++.++.||.+...|..+|+.+........ .......++.+++.++....++.-.+|....
T Consensus 329 ---~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~l~s~~~dg~v~iwd~~~ 391 (445)
T 2ovr_B 329 ---DNILVSGNADSTVKIWDIKTGQCLQTLQGPNK--HQSAVTCLQFNKNFVITSSDDGTVKLWDLKT 391 (445)
T ss_dssp ---TTEEEEEETTSCEEEEETTTCCEEEEECSTTS--CSSCEEEEEECSSEEEEEETTSEEEEEETTT
T ss_pred ---CCEEEEEeCCCeEEEEECCCCcEEEEEccCCC--CCCCEEEEEECCCEEEEEeCCCeEEEEECCC
Confidence 45788889999999999999999888764210 1122223455666666666555566777543
No 33
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=98.48 E-value=5.1e-05 Score=74.91 Aligned_cols=214 Identities=12% Similarity=0.013 Sum_probs=132.2
Q ss_pred CccccccceeeeEEEeCCceeeCcEEECCEEEEeccCCcEEEEECCCCccceEeecccccCCcce----eeEEeeeeeEE
Q 039692 21 NPVTVRNLRLRWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTGLSGT----GIVVNVTVAVV 96 (417)
Q Consensus 21 ~~~~~~~~~~~W~~~~~~~~~~~p~~~~g~v~v~~~~g~l~ald~~tG~~~W~~~~~~~~~~~p~----~~v~~~~v~~l 96 (417)
...+..+++...++......-......++.++.++.++.|..+|.++++.+.............. -++.....+.+
T Consensus 182 ~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i 261 (445)
T 2ovr_B 182 KVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMV 261 (445)
T ss_dssp EEEETTTTEEEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEECSSCEEEEETTSCE
T ss_pred EEEECCcCcEEEEECCCCCcEEEEEecCCEEEEEeCCCEEEEEECCCCcEEEEEcCCcccEEEEEECCCEEEEEcCCCEE
Confidence 33344445554444433222222334678899999999999999999999888765421100000 00111122889
Q ss_pred EEEecCCCceeeeeecCCCCCcceeeceeEEcCeEEEEeCCccCccccCcccCCCceEEEEeCCCCceeceeeecCCCCC
Q 039692 97 VAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNGG 176 (417)
Q Consensus 97 ~ald~~tG~~~W~~~~~~~~~~~~~~sp~v~~~~v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~~~W~~~~~~~~~~ 176 (417)
..+|..+++.+.+.+.... .+. +....+..++++.. ++.|..+|.++|+.+.++......
T Consensus 262 ~iwd~~~~~~~~~~~~~~~---~v~-~~~~~~~~l~~~~~--------------d~~i~i~d~~~~~~~~~~~~~~~~-- 321 (445)
T 2ovr_B 262 KVWDPETETCLHTLQGHTN---RVY-SLQFDGIHVVSGSL--------------DTSIRVWDVETGNCIHTLTGHQSL-- 321 (445)
T ss_dssp EEEEGGGTEEEEEECCCSS---CEE-EEEECSSEEEEEET--------------TSCEEEEETTTCCEEEEECCCCSC--
T ss_pred EEEECCCCcEeEEecCCCC---ceE-EEEECCCEEEEEeC--------------CCeEEEEECCCCCEEEEEcCCccc--
Confidence 9999999999988773221 111 22223455666655 689999999999998876542110
Q ss_pred CCCCCCCccccCCCceeecccCcccCCCCCCCCCCCCcccCCCCCCeEEEEECCCCceEEEecCCCCcceeeeccCCCCC
Q 039692 177 KRGGYSGAAVWGSSPAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNP 256 (417)
Q Consensus 177 ~~~~~~gg~~~~~~pa~d~~~~~~~~~~~~~p~~~~~~v~~~~~~~~l~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~ 256 (417)
+. ...++. ..+..+..++.+..+|.++|+.+..+......
T Consensus 322 ---------v~--~~~~~~-----------------~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~------------ 361 (445)
T 2ovr_B 322 ---------TS--GMELKD-----------------NILVSGNADSTVKIWDIKTGQCLQTLQGPNKH------------ 361 (445)
T ss_dssp ---------EE--EEEEET-----------------TEEEEEETTSCEEEEETTTCCEEEEECSTTSC------------
T ss_pred ---------EE--EEEEeC-----------------CEEEEEeCCCeEEEEECCCCcEEEEEccCCCC------------
Confidence 00 111111 23445567889999999999998887653211
Q ss_pred CCCCCCCCCCccCCCceEEEEecCCeeeeEEEEEcccceEEEEECCCCcEEEEee
Q 039692 257 DCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDIIWFKL 311 (417)
Q Consensus 257 ~c~~~~~~~~~~~~~p~v~~~~~~G~~~~~v~~~~~~G~l~ald~~tG~~lW~~~ 311 (417)
..++ ..+..+ ++.++.++.||.+...|..+|+.+-...
T Consensus 362 -------------~~~v-~~~~~~---~~~l~s~~~dg~v~iwd~~~~~~~~~~~ 399 (445)
T 2ovr_B 362 -------------QSAV-TCLQFN---KNFVITSSDDGTVKLWDLKTGEFIRNLV 399 (445)
T ss_dssp -------------SSCE-EEEEEC---SSEEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred -------------CCCE-EEEEEC---CCEEEEEeCCCeEEEEECCCCceeeeee
Confidence 1122 223334 3578888999999999999999988774
No 34
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=98.44 E-value=3.3e-05 Score=72.31 Aligned_cols=158 Identities=11% Similarity=-0.001 Sum_probs=93.1
Q ss_pred CEEEEeccCCcEEEEECCCCccceEeeccc---ccC---Cccee--e-EEeeeeeEEEEEecCCCceeeeeecCC-----
Q 039692 49 GVVYFPSWNGYLYAVNAFNGALIWEQNLSK---LTG---LSGTG--I-VVNVTVAVVVAVSRSNGELVWSTQIDP----- 114 (417)
Q Consensus 49 g~v~v~~~~g~l~ald~~tG~~~W~~~~~~---~~~---~~p~~--~-v~~~~v~~l~ald~~tG~~~W~~~~~~----- 114 (417)
+.++..+.++.|+.+|.++|+++++...+. ... .+|.+ + +.....+.|+.+|..+|+++++.....
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~ 81 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERV 81 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEE
T ss_pred cEEEEcCCCCeEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCccccc
Confidence 356667788999999999999999988765 211 11211 0 111112789999999999999888643
Q ss_pred -CCCcceeeceeEEcCeEEEEeCCccCccccCcccCCCceEEEEeCCCCceeceeeecCCCCCCCCCCCCccccCCCcee
Q 039692 115 -RPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYSGAAVWGSSPAI 193 (417)
Q Consensus 115 -~~~~~~~~sp~v~~~~v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~~gg~~~~~~pa~ 193 (417)
.. ..+..+| .+..+|++......... .....++.|+.+|.++++.++.+...... ...++
T Consensus 82 ~~~-~~~~~s~--dg~~l~~~~~~~~~~~~--~~~~~~~~i~v~d~~~~~~~~~~~~~~~~--------------~~~~~ 142 (337)
T 1pby_B 82 KSL-FGAALSP--DGKTLAIYESPVRLELT--HFEVQPTRVALYDAETLSRRKAFEAPRQI--------------TMLAW 142 (337)
T ss_dssp ECT-TCEEECT--TSSEEEEEEEEEEECSS--CEEECCCEEEEEETTTTEEEEEEECCSSC--------------CCEEE
T ss_pred ccc-cceEECC--CCCEEEEEecccccccc--cccccCceEEEEECCCCcEEEEEeCCCCc--------------ceeEE
Confidence 11 1122222 13367776421000000 00001479999999999999887652110 12233
Q ss_pred ecccCcccCCCCCCCCCCCCcccCCCCCCeEEEEECCCCceEEEecCCC
Q 039692 194 DVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGG 242 (417)
Q Consensus 194 d~~~~~~~~~~~~~p~~~~~~v~~~~~~~~l~ald~~tG~~~W~~~~~~ 242 (417)
+++.. .++.. ++.++.+|.++|+++...+...
T Consensus 143 s~dg~---------------~l~~~--~~~i~~~d~~~~~~~~~~~~~~ 174 (337)
T 1pby_B 143 ARDGS---------------KLYGL--GRDLHVMDPEAGTLVEDKPIQS 174 (337)
T ss_dssp CTTSS---------------CEEEE--SSSEEEEETTTTEEEEEECSTT
T ss_pred CCCCC---------------EEEEe--CCeEEEEECCCCcEeeeeeccc
Confidence 33221 13333 4789999999999988776543
No 35
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=98.34 E-value=0.00013 Score=71.37 Aligned_cols=213 Identities=8% Similarity=-0.007 Sum_probs=120.5
Q ss_pred CCEEEEec-cCCcEEEEECCCCccceEeecccc---cC------Cccee--eEEeeeeeEEEEEecCCCceeeeeecCCC
Q 039692 48 NGVVYFPS-WNGYLYAVNAFNGALIWEQNLSKL---TG------LSGTG--IVVNVTVAVVVAVSRSNGELVWSTQIDPR 115 (417)
Q Consensus 48 ~g~v~v~~-~~g~l~ald~~tG~~~W~~~~~~~---~~------~~p~~--~v~~~~v~~l~ald~~tG~~~W~~~~~~~ 115 (417)
++.+++++ .++.|+.+|.++|+.+........ .. .+|.+ ++.....+.++.+|.++++.+++......
T Consensus 133 ~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~~~~~~~~~~~ 212 (433)
T 3bws_A 133 NTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQANAVHVFDLKTLAYKATVDLTGK 212 (433)
T ss_dssp SSEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTCCEEEEEECSSS
T ss_pred CCeEEEEeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECCCCEEEEEECCCceEEEEEcCCCC
Confidence 67777665 467899999999998754433211 00 01110 01111228999999999999998874322
Q ss_pred CCcceeeceeEEcCeEEEEeCCccCccccCcccCCCceEEEEeCCCCceeceeeecCCCCCCCCCCCCccccCCCceeec
Q 039692 116 PRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYSGAAVWGSSPAIDV 195 (417)
Q Consensus 116 ~~~~~~~sp~v~~~~v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~~gg~~~~~~pa~d~ 195 (417)
....+..+| .+..+|+.... ++.|+.+|.++|+.++.+..... + ...++++
T Consensus 213 ~~~~~~~~~--~~~~l~~~~~~-------------~~~i~~~d~~~~~~~~~~~~~~~------------~--~~~~~~~ 263 (433)
T 3bws_A 213 WSKILLYDP--IRDLVYCSNWI-------------SEDISVIDRKTKLEIRKTDKIGL------------P--RGLLLSK 263 (433)
T ss_dssp SEEEEEEET--TTTEEEEEETT-------------TTEEEEEETTTTEEEEECCCCSE------------E--EEEEECT
T ss_pred CeeEEEEcC--CCCEEEEEecC-------------CCcEEEEECCCCcEEEEecCCCC------------c--eEEEEcC
Confidence 111122222 13456666543 58999999999998877654210 0 0123332
Q ss_pred ccCcccCCCCCCCCCCCCcccCC--------CCCCeEEEEECCCCceEEEecCCCCcceeeeccCCCCCCCCCCCCCCCc
Q 039692 196 IRRQKQNNQTTKPTHPDQCISSD--------IYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDAD 267 (417)
Q Consensus 196 ~~~~~~~~~~~~p~~~~~~v~~~--------~~~~~l~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~ 267 (417)
+.. .++.. ..++.|+.+|.++|+++........
T Consensus 264 ~g~---------------~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~~~~~------------------------ 304 (433)
T 3bws_A 264 DGK---------------ELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIGPPGN------------------------ 304 (433)
T ss_dssp TSS---------------EEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEEEEEC------------------------
T ss_pred CCC---------------EEEEEECCCCccccCCCeEEEEECCCCcEEeeccCCCC------------------------
Confidence 221 11111 1367899999999998876632211
Q ss_pred cCCCceEEEEecCCeeeeEEEEEcccceEEEEECCCCcEEEEeecCCCCCCCcceecccccCCeEEEEecc
Q 039692 268 FGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDIIWFKLAGPGGREGGGVWGAATDGRRVYTNIVN 338 (417)
Q Consensus 268 ~~~~p~v~~~~~~G~~~~~v~~~~~~G~l~ald~~tG~~lW~~~~~~~~~~g~~~~~~~~~~~~vy~~~~~ 338 (417)
+.-.....+| +.+++....++.++.+|.++++++....... .........+++.+|+....
T Consensus 305 ----~~~~~~~~~g--~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~~----~~~~~~~s~dg~~l~~~~~~ 365 (433)
T 3bws_A 305 ----KRHIVSGNTE--NKIYVSDMCCSKIEVYDLKEKKVQKSIPVFD----KPNTIALSPDGKYLYVSCRG 365 (433)
T ss_dssp ----EEEEEECSST--TEEEEEETTTTEEEEEETTTTEEEEEEECSS----SEEEEEECTTSSEEEEEECC
T ss_pred ----cceEEECCCC--CEEEEEecCCCEEEEEECCCCcEEEEecCCC----CCCeEEEcCCCCEEEEEecC
Confidence 1111122233 1244445889999999999999998876431 01111222345567776554
No 36
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.26 E-value=0.00011 Score=67.43 Aligned_cols=171 Identities=12% Similarity=-0.024 Sum_probs=98.4
Q ss_pred EEEEEecCCCceeeeeecCCCCCcceeeceeEEcCeEEEEeCCccCccccCcccCCCceEEEEeCCCCceeceeeecCCC
Q 039692 95 VVVAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDN 174 (417)
Q Consensus 95 ~l~ald~~tG~~~W~~~~~~~~~~~~~~sp~v~~~~v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~~~W~~~~~~~~ 174 (417)
.|..+|++||+++=+.+++... +...-++.+++||+.... ++.++.+|++|++++=+++..+.+
T Consensus 66 ~v~~vD~~Tgkv~~~~~l~~~~---FgeGit~~g~~ly~ltw~-------------~~~v~v~D~~t~~~~~ti~~~~eG 129 (262)
T 3nol_A 66 SIRKVDIESGKTLQQIELGKRY---FGEGISDWKDKIVGLTWK-------------NGLGFVWNIRNLRQVRSFNYDGEG 129 (262)
T ss_dssp EEEEECTTTCCEEEEEECCTTC---CEEEEEEETTEEEEEESS-------------SSEEEEEETTTCCEEEEEECSSCC
T ss_pred eEEEEECCCCcEEEEEecCCcc---ceeEEEEeCCEEEEEEee-------------CCEEEEEECccCcEEEEEECCCCc
Confidence 3444444444444444433221 111223457788888764 689999999999999988874321
Q ss_pred CCCCCCCCCccccCCCceeecccCcccCCCCCCCCCCCCcccCCCCCCeEEEEECCCCceEEEecCCCCcceeeeccCCC
Q 039692 175 GGKRGGYSGAAVWGSSPAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPN 254 (417)
Q Consensus 175 ~~~~~~~~gg~~~~~~pa~d~~~~~~~~~~~~~p~~~~~~v~~~~~~~~l~ald~~tG~~~W~~~~~~~~~~~~~~~~~~ 254 (417)
| ..+.|. ..++.....+.|+.+|++|.+++=+.+....... +
T Consensus 130 ------------~--glt~dg-----------------~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~-~------ 171 (262)
T 3nol_A 130 ------------W--GLTHND-----------------QYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEE-L------ 171 (262)
T ss_dssp ------------C--CEEECS-----------------SCEEECCSSSEEEEECTTTCSEEEEEECEETTEE-C------
T ss_pred ------------e--EEecCC-----------------CEEEEECCCCeEEEEcCCCCeEEEEEEeccCCcc-c------
Confidence 1 122222 2233444467899999999999887776421100 0
Q ss_pred CCCCCCCCCCCCccCCCceEEEEecCCeeeeEEEEEc-ccceEEEEECCCCcEEEEeecCC---C----CCCCcceeccc
Q 039692 255 NPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQ-KSGFAWAFDRDSGDIIWFKLAGP---G----GREGGGVWGAA 326 (417)
Q Consensus 255 ~~~c~~~~~~~~~~~~~p~v~~~~~~G~~~~~v~~~~-~~G~l~ald~~tG~~lW~~~~~~---~----~~~g~~~~~~~ 326 (417)
...+..... + +.||+.. .+..++.||++||+++=..+... . ...+....++|
T Consensus 172 ------------~~lNELe~~----~----G~lyan~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA 231 (262)
T 3nol_A 172 ------------PELNELEWV----D----GEIFANVWQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIA 231 (262)
T ss_dssp ------------CCEEEEEEE----T----TEEEEEETTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEE
T ss_pred ------------cccceeEEE----C----CEEEEEEccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEE
Confidence 000011111 2 3577775 46799999999999987777641 0 01112223556
Q ss_pred cc--CCeEEEEeccC
Q 039692 327 TD--GRRVYTNIVNN 339 (417)
Q Consensus 327 ~~--~~~vy~~~~~~ 339 (417)
.+ .+++|++.-..
T Consensus 232 ~dp~~~~lfVTGK~W 246 (262)
T 3nol_A 232 WDKEHHRLFVTGKLW 246 (262)
T ss_dssp EETTTTEEEEEETTC
T ss_pred EcCCCCEEEEECCCC
Confidence 54 57888876433
No 37
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.23 E-value=3e-05 Score=71.38 Aligned_cols=140 Identities=12% Similarity=0.000 Sum_probs=87.6
Q ss_pred EEcCeEEEEeCCccCccccCcccCCCceEEEEeCCCCceeceeeecCCCCCCCCCCCCccccCCCceeecccCcccCCCC
Q 039692 126 VYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYSGAAVWGSSPAIDVIRRQKQNNQT 205 (417)
Q Consensus 126 v~~~~v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~~gg~~~~~~pa~d~~~~~~~~~~~ 205 (417)
+.+++||+.... ++.++.+|++|++++=+++..+.. | ..+.|..+
T Consensus 103 ~~g~~Ly~ltw~-------------~~~v~V~D~~Tl~~~~ti~~~~eG------------w--GLt~Dg~~-------- 147 (268)
T 3nok_A 103 SDGERLYQLTWT-------------EGLLFTWSGMPPQRERTTRYSGEG------------W--GLCYWNGK-------- 147 (268)
T ss_dssp ECSSCEEEEESS-------------SCEEEEEETTTTEEEEEEECSSCC------------C--CEEEETTE--------
T ss_pred EeCCEEEEEEcc-------------CCEEEEEECCcCcEEEEEeCCCce------------e--EEecCCCE--------
Confidence 346778887764 689999999999999888874321 2 12333322
Q ss_pred CCCCCCCCcccCCCCCCeEEEEECCCCceEEEecCCCCcceeeeccCCCCCCCCCCCCCCCccCCCceEEEEe-cCCeee
Q 039692 206 TKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTIS-TNGRFR 284 (417)
Q Consensus 206 ~~p~~~~~~v~~~~~~~~l~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~p~v~~~~-~~G~~~ 284 (417)
++.....+.|+.||++|.+++=+.+......- + ..+..+. .+
T Consensus 148 ---------L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~---------------------v---~~lNeLe~~d---- 190 (268)
T 3nok_A 148 ---------LVRSDGGTMLTFHEPDGFALVGAVQVKLRGQP---------------------V---ELINELECAN---- 190 (268)
T ss_dssp ---------EEEECSSSEEEEECTTTCCEEEEEECEETTEE---------------------C---CCEEEEEEET----
T ss_pred ---------EEEECCCCEEEEEcCCCCeEEEEEEeCCCCcc---------------------c---ccccccEEeC----
Confidence 33444578999999999999887776432110 0 0011111 13
Q ss_pred eEEEEEc-ccceEEEEECCCCcEEEEeecCC--------CCCCCcceeccccc--CCeEEEEec
Q 039692 285 DVVVAVQ-KSGFAWAFDRDSGDIIWFKLAGP--------GGREGGGVWGAATD--GRRVYTNIV 337 (417)
Q Consensus 285 ~~v~~~~-~~G~l~ald~~tG~~lW~~~~~~--------~~~~g~~~~~~~~~--~~~vy~~~~ 337 (417)
+.||+.. .+..+..||++||+++=..+... ....+....++|.+ ++++|++.-
T Consensus 191 G~lyanvw~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTGK 254 (268)
T 3nok_A 191 GVIYANIWHSSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTGK 254 (268)
T ss_dssp TEEEEEETTCSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEET
T ss_pred CEEEEEECCCCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeCC
Confidence 3578775 46799999999999987777631 11112233356655 578888753
No 38
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=98.19 E-value=0.0004 Score=68.28 Aligned_cols=219 Identities=12% Similarity=0.017 Sum_probs=136.5
Q ss_pred ECCEEEEeccCCcEEEEECCCCccceEeecccc-cCC-cc--eeeEEeeeeeEEEEEecCCCceeeeeecCCCCCcceee
Q 039692 47 ANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKL-TGL-SG--TGIVVNVTVAVVVAVSRSNGELVWSTQIDPRPRSQITM 122 (417)
Q Consensus 47 ~~g~v~v~~~~g~l~ald~~tG~~~W~~~~~~~-~~~-~p--~~~v~~~~v~~l~ald~~tG~~~W~~~~~~~~~~~~~~ 122 (417)
.+..++.++.+|.|..+|.++|+.++.+..... +.+ +. .-++..+..+.+..+|..+|+.+.+....... + .
T Consensus 142 d~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~---v-~ 217 (435)
T 1p22_A 142 DDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYDERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEA---V-L 217 (435)
T ss_dssp CSSEEEEEESSSCEEEEESSSCCEEEEECCCSSCEEEEECCSSEEEEEETTSCEEEEESSSCCEEEEECCCCSC---E-E
T ss_pred CCCEEEEEeCCCeEEEEeCCCCeEEEEEcCCCCcEEEEEECCCEEEEEcCCCeEEEEECCCCcEEEEEcCCCCc---E-E
Confidence 356788888999999999999999888764421 100 00 00111112388999999999998877633221 1 1
Q ss_pred ceeEEcCeEEEEeCCccCccccCcccCCCceEEEEeCCCCceeceeeecCCCCCCCCCCCCccccCCCceeecccCcccC
Q 039692 123 SGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYSGAAVWGSSPAIDVIRRQKQN 202 (417)
Q Consensus 123 sp~v~~~~v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~~gg~~~~~~pa~d~~~~~~~~ 202 (417)
+....++.++.+.. ++.|..+|.++++............ ..+. ..+++
T Consensus 218 ~l~~~~~~l~s~s~--------------dg~i~vwd~~~~~~~~~~~~~~~~~--------~~v~--~~~~~-------- 265 (435)
T 1p22_A 218 HLRFNNGMMVTCSK--------------DRSIAVWDMASPTDITLRRVLVGHR--------AAVN--VVDFD-------- 265 (435)
T ss_dssp EEECCTTEEEEEET--------------TSCEEEEECSSSSCCEEEEEECCCS--------SCEE--EEEEE--------
T ss_pred EEEEcCCEEEEeeC--------------CCcEEEEeCCCCCCceeeeEecCCC--------CcEE--EEEeC--------
Confidence 11223556666665 6899999999887764333221110 0000 11121
Q ss_pred CCCCCCCCCCCcccCCCCCCeEEEEECCCCceEEEecCCCCcceeeeccCCCCCCCCCCCCCCCccCCCceEEEEecCCe
Q 039692 203 NQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTISTNGR 282 (417)
Q Consensus 203 ~~~~~p~~~~~~v~~~~~~~~l~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~p~v~~~~~~G~ 282 (417)
...+..+..++.+..+|.++++.+..+...... + ..+..+
T Consensus 266 ---------~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~----------------------------v-~~~~~~-- 305 (435)
T 1p22_A 266 ---------DKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRG----------------------------I-ACLQYR-- 305 (435)
T ss_dssp ---------TTEEEEEETTSEEEEEETTTCCEEEEEECCSSC----------------------------E-EEEEEE--
T ss_pred ---------CCEEEEEeCCCeEEEEECCcCcEEEEEcCCCCc----------------------------E-EEEEeC--
Confidence 123445667899999999999998877643221 1 111222
Q ss_pred eeeEEEEEcccceEEEEECCCCcEEEEeecCCCCCCCcceecccccCCeEEEEeccCCceeeeec
Q 039692 283 FRDVVVAVQKSGFAWAFDRDSGDIIWFKLAGPGGREGGGVWGAATDGRRVYTNIVNNDRIIWSTA 347 (417)
Q Consensus 283 ~~~~v~~~~~~G~l~ald~~tG~~lW~~~~~~~~~~g~~~~~~~~~~~~vy~~~~~~~~~~W~~~ 347 (417)
++.++.++.||.+...|..+|+.+....... .....++.++..++....++.-.+|...
T Consensus 306 -~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~-----~~v~~~~~~~~~l~sg~~dg~i~vwd~~ 364 (435)
T 1p22_A 306 -DRLVVSGSSDNTIRLWDIECGACLRVLEGHE-----ELVRCIRFDNKRIVSGAYDGKIKVWDLV 364 (435)
T ss_dssp -TTEEEEEETTSCEEEEETTTCCEEEEECCCS-----SCEEEEECCSSEEEEEETTSCEEEEEHH
T ss_pred -CCEEEEEeCCCeEEEEECCCCCEEEEEeCCc-----CcEEEEEecCCEEEEEeCCCcEEEEECC
Confidence 4678888999999999999999988776421 2223445577777777766666778754
No 39
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=98.19 E-value=0.00018 Score=67.69 Aligned_cols=161 Identities=12% Similarity=0.104 Sum_probs=86.9
Q ss_pred CCEEEEe-ccCCcEEEEECCCCccceEeeccc--ccC---Cccee--e-EEeeeeeEEEEEecCCCceeeeeecCCCC--
Q 039692 48 NGVVYFP-SWNGYLYAVNAFNGALIWEQNLSK--LTG---LSGTG--I-VVNVTVAVVVAVSRSNGELVWSTQIDPRP-- 116 (417)
Q Consensus 48 ~g~v~v~-~~~g~l~ald~~tG~~~W~~~~~~--~~~---~~p~~--~-v~~~~v~~l~ald~~tG~~~W~~~~~~~~-- 116 (417)
++.+|+. +.++.|+.+|.++|+++++...+. ... .+|.+ + +.....+.|+.+|.++|+++++.+.....
T Consensus 10 ~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~~~~~~~ 89 (349)
T 1jmx_B 10 GHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVPGE 89 (349)
T ss_dssp TCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESCCSTTE
T ss_pred CCEEEEEeCCCCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEccccccc
Confidence 5666665 468999999999999999988764 111 11111 0 11111278999999999999988864321
Q ss_pred ----CcceeeceeEEcCeEEEEeCCccCccccCcccCCCceEEEEeCCCCceeceeeecCCCCCCCCCCCCccccCCCce
Q 039692 117 ----RSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYSGAAVWGSSPA 192 (417)
Q Consensus 117 ----~~~~~~sp~v~~~~v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~~gg~~~~~~pa 192 (417)
...+..+| .+..+|++........ ..-....+.|+.+|.++|+..-.....+.... + ...+
T Consensus 90 ~~~~~~~~~~sp--dg~~l~~~~~~~~~~~--~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~---------~--~~~~ 154 (349)
T 1jmx_B 90 VGRSMYSFAISP--DGKEVYATVNPTQRLN--DHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQ---------V--YLMR 154 (349)
T ss_dssp EEECSSCEEECT--TSSEEEEEEEEEEECS--SCEEECCCEEEEEEGGGGGGBCCSEEEECCSS---------C--CCEE
T ss_pred ccccccceEECC--CCCEEEEEcccccccc--cccccCCCeEEEEECCCccccceeeeccCCCc---------c--ccee
Confidence 11122333 1335776653100000 00000026899999998765433222111000 0 0112
Q ss_pred eecccCcccCCCCCCCCCCCCcccCCCCCCeEEEEECCCCceEEEecCC
Q 039692 193 IDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLG 241 (417)
Q Consensus 193 ~d~~~~~~~~~~~~~p~~~~~~v~~~~~~~~l~ald~~tG~~~W~~~~~ 241 (417)
++++ +.++.. .+.++.+|.++|+++...+..
T Consensus 155 ~s~d----------------g~l~~~--~~~i~~~d~~~~~~~~~~~~~ 185 (349)
T 1jmx_B 155 AADD----------------GSLYVA--GPDIYKMDVKTGKYTVALPLR 185 (349)
T ss_dssp ECTT----------------SCEEEE--SSSEEEECTTTCCEEEEECST
T ss_pred ECCC----------------CcEEEc--cCcEEEEeCCCCceecccccc
Confidence 2221 123332 334999999999998877654
No 40
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=98.17 E-value=0.00021 Score=69.77 Aligned_cols=227 Identities=12% Similarity=0.077 Sum_probs=130.4
Q ss_pred CCEEEEe-ccCCcEEEEECCCCccceEeeccccc----CCccee--eEEee-eeeEEEEEecCCCceeeeeecCCCCCcc
Q 039692 48 NGVVYFP-SWNGYLYAVNAFNGALIWEQNLSKLT----GLSGTG--IVVNV-TVAVVVAVSRSNGELVWSTQIDPRPRSQ 119 (417)
Q Consensus 48 ~g~v~v~-~~~g~l~ald~~tG~~~W~~~~~~~~----~~~p~~--~v~~~-~v~~l~ald~~tG~~~W~~~~~~~~~~~ 119 (417)
++.++++ +.++.|+.+|.++++.++++...... ..+|.+ ++..+ ..+.|+.+|..+|+.++..+..... ..
T Consensus 180 ~~~~~~s~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~-~~ 258 (433)
T 3bws_A 180 HNELWVSQMQANAVHVFDLKTLAYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDKIGLP-RG 258 (433)
T ss_dssp GTEEEEEEGGGTEEEEEETTTCCEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCCCSEE-EE
T ss_pred CCEEEEEECCCCEEEEEECCCceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecCCCCc-eE
Confidence 5666655 46799999999999999888743211 111110 11111 2278999999999998887653211 11
Q ss_pred eeeceeEEcCeEEEEeCCccCccccCcccCCCceEEEEeCCCCceeceeeecCCCCCCCCCCCCccccCCCceeecccCc
Q 039692 120 ITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYSGAAVWGSSPAIDVIRRQ 199 (417)
Q Consensus 120 ~~~sp~v~~~~v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~~gg~~~~~~pa~d~~~~~ 199 (417)
+..+| .+..++++...... ....++.|+.+|.++|+.+......... ...+++++.
T Consensus 259 ~~~~~--~g~~l~~~~~~~~~------~~~~dg~i~~~d~~~~~~~~~~~~~~~~--------------~~~~~~~~g-- 314 (433)
T 3bws_A 259 LLLSK--DGKELYIAQFSASN------QESGGGRLGIYSMDKEKLIDTIGPPGNK--------------RHIVSGNTE-- 314 (433)
T ss_dssp EEECT--TSSEEEEEEEESCT------TCSCCEEEEEEETTTTEEEEEEEEEECE--------------EEEEECSST--
T ss_pred EEEcC--CCCEEEEEECCCCc------cccCCCeEEEEECCCCcEEeeccCCCCc--------------ceEEECCCC--
Confidence 12222 13356666532110 0012579999999999988776432100 012232221
Q ss_pred ccCCCCCCCCCCCCccc-CCCCCCeEEEEECCCCceEEEecCCCCcceeeeccCCCCCCCCCCCCCCCccCCCceEEEEe
Q 039692 200 KQNNQTTKPTHPDQCIS-SDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTIS 278 (417)
Q Consensus 200 ~~~~~~~~p~~~~~~v~-~~~~~~~l~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~p~v~~~~ 278 (417)
..++ ....++.+..+|.++++++...+.... +.-..+.
T Consensus 315 -------------~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~~~----------------------------~~~~~~s 353 (433)
T 3bws_A 315 -------------NKIYVSDMCCSKIEVYDLKEKKVQKSIPVFDK----------------------------PNTIALS 353 (433)
T ss_dssp -------------TEEEEEETTTTEEEEEETTTTEEEEEEECSSS----------------------------EEEEEEC
T ss_pred -------------CEEEEEecCCCEEEEEECCCCcEEEEecCCCC----------------------------CCeEEEc
Confidence 1122 335678999999999999887764321 1111222
Q ss_pred cCCeeeeEEEEEcc---------------cceEEEEECCCCcEEEEeecCCCCCCCcceecccccCCeEEEEec-cCCce
Q 039692 279 TNGRFRDVVVAVQK---------------SGFAWAFDRDSGDIIWFKLAGPGGREGGGVWGAATDGRRVYTNIV-NNDRI 342 (417)
Q Consensus 279 ~~G~~~~~v~~~~~---------------~G~l~ald~~tG~~lW~~~~~~~~~~g~~~~~~~~~~~~vy~~~~-~~~~~ 342 (417)
.+| +.+++++. ||.++.+|.++++.+....... .........+++.+++... ++.-.
T Consensus 354 ~dg---~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~~~~----~~~~~~~s~dg~~l~~~~~~d~~i~ 426 (433)
T 3bws_A 354 PDG---KYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWEAGN----QPTGLDVSPDNRYLVISDFLDHQIR 426 (433)
T ss_dssp TTS---SEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEEECSS----SEEEEEECTTSCEEEEEETTTTEEE
T ss_pred CCC---CEEEEEecCCCccccccccccccceEEEEEECCCCcEEEEecCCC----CCceEEEcCCCCEEEEEECCCCeEE
Confidence 233 35565544 5799999999999988776421 0111122346677777765 44456
Q ss_pred eeeec
Q 039692 343 IWSTA 347 (417)
Q Consensus 343 ~W~~~ 347 (417)
+|+.+
T Consensus 427 v~~~~ 431 (433)
T 3bws_A 427 VYRRD 431 (433)
T ss_dssp EEEET
T ss_pred EEEec
Confidence 67654
No 41
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.14 E-value=0.00014 Score=66.15 Aligned_cols=143 Identities=11% Similarity=-0.038 Sum_probs=88.0
Q ss_pred EEcCeEEEEeCCccCccccCcccCCCceEEEEeCCCCceeceeeecCCCCCCCCCCCCccccCCCceeecccCcccCCCC
Q 039692 126 VYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYSGAAVWGSSPAIDVIRRQKQNNQT 205 (417)
Q Consensus 126 v~~~~v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~~gg~~~~~~pa~d~~~~~~~~~~~ 205 (417)
+.++++|+.... ++.++.+|++|++++=+++..... |+ .+.|.
T Consensus 72 ~~~~~ly~ltw~-------------~~~v~v~D~~tl~~~~ti~~~~~G------------wg--lt~dg---------- 114 (243)
T 3mbr_X 72 AWRDRLIQLTWR-------------NHEGFVYDLATLTPRARFRYPGEG------------WA--LTSDD---------- 114 (243)
T ss_dssp EETTEEEEEESS-------------SSEEEEEETTTTEEEEEEECSSCC------------CE--EEECS----------
T ss_pred EeCCEEEEEEee-------------CCEEEEEECCcCcEEEEEeCCCCc------------eE--EeeCC----------
Confidence 447788887754 689999999999999988873211 21 12222
Q ss_pred CCCCCCCCcccCCCCCCeEEEEECCCCceEEEecCCCCcceeeeccCCCCCCCCCCCCCCCccCCCceEEEEecCCeeee
Q 039692 206 TKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRD 285 (417)
Q Consensus 206 ~~p~~~~~~v~~~~~~~~l~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~p~v~~~~~~G~~~~ 285 (417)
..++.....+.|+.+|++|.+++=+.+......- + ..+..+.. .++
T Consensus 115 -------~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~---------------------~---~~lNeLe~---~~G 160 (243)
T 3mbr_X 115 -------SHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRP---------------------L---DNLNELEW---VNG 160 (243)
T ss_dssp -------SCEEEECSSSEEEEECTTTCCEEEEEECEETTEE---------------------C---CCEEEEEE---ETT
T ss_pred -------CEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcc---------------------c---ccceeeEE---eCC
Confidence 2234444578999999999999887776532100 0 00111110 023
Q ss_pred EEEEEc-ccceEEEEECCCCcEEEEeecCC---CC-----CCCcceeccccc--CCeEEEEeccC
Q 039692 286 VVVAVQ-KSGFAWAFDRDSGDIIWFKLAGP---GG-----REGGGVWGAATD--GRRVYTNIVNN 339 (417)
Q Consensus 286 ~v~~~~-~~G~l~ald~~tG~~lW~~~~~~---~~-----~~g~~~~~~~~~--~~~vy~~~~~~ 339 (417)
.||+.. .+..+..||++||+++=..++.. .. ..+....++|.+ ++++|++.-..
T Consensus 161 ~lyanvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK~w 225 (243)
T 3mbr_X 161 ELLANVWLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGKRW 225 (243)
T ss_dssp EEEEEETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEETTC
T ss_pred EEEEEECCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECCCC
Confidence 577765 46799999999999987777641 10 112233356654 57888876433
No 42
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=98.11 E-value=0.0018 Score=61.05 Aligned_cols=220 Identities=16% Similarity=0.151 Sum_probs=128.7
Q ss_pred CCEEEEeccCCcEEEEECCCCcc--ceEeecccc-cC---Cccee--eEEeeeeeEEEEEecCCCceeeeeecCCCCCcc
Q 039692 48 NGVVYFPSWNGYLYAVNAFNGAL--IWEQNLSKL-TG---LSGTG--IVVNVTVAVVVAVSRSNGELVWSTQIDPRPRSQ 119 (417)
Q Consensus 48 ~g~v~v~~~~g~l~ald~~tG~~--~W~~~~~~~-~~---~~p~~--~v~~~~v~~l~ald~~tG~~~W~~~~~~~~~~~ 119 (417)
+..++.++.++.|...|.++++. .|...-... +. .++.+ ++.....+.+...|..+|+.+.+..........
T Consensus 48 ~~~l~tgs~D~~v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~~~~~l~s~s~D~~i~lWd~~~~~~~~~~~~~~~~~~~ 127 (321)
T 3ow8_A 48 SETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWT 127 (321)
T ss_dssp -CEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCCCC
T ss_pred CCEEEEEcCCCCEEEEECCCCCeeeeeeeccCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCCEEEEEeCCCccEEE
Confidence 34677788899999999877764 344332211 10 01110 112223489999999999998887754332222
Q ss_pred eeeceeEEcCe-EEEEeCCccCccccCcccCCCceEEEEeCCCCceeceeeecCCCCCCCCCCCCccccCCCceeecccC
Q 039692 120 ITMSGSVYMGA-FYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYSGAAVWGSSPAIDVIRR 198 (417)
Q Consensus 120 ~~~sp~v~~~~-v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~~gg~~~~~~pa~d~~~~ 198 (417)
+..+| ++. ++++.. ++.+..+|.++++...+....... + ...++.++
T Consensus 128 ~~~sp---dg~~l~~g~~--------------dg~v~i~~~~~~~~~~~~~~~~~~-----------v--~~~~~spd-- 175 (321)
T 3ow8_A 128 LAFSP---DSQYLATGTH--------------VGKVNIFGVESGKKEYSLDTRGKF-----------I--LSIAYSPD-- 175 (321)
T ss_dssp EEECT---TSSEEEEECT--------------TSEEEEEETTTCSEEEEEECSSSC-----------E--EEEEECTT--
T ss_pred EEECC---CCCEEEEEcC--------------CCcEEEEEcCCCceeEEecCCCce-----------E--EEEEECCC--
Confidence 33444 444 444444 689999999999998876652110 0 01222222
Q ss_pred cccCCCCCCCCCCCCcccCCCCCCeEEEEECCCCceEEEecCCCCcceeeeccCCCCCCCCCCCCCCCccCCCceEEEEe
Q 039692 199 QKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTIS 278 (417)
Q Consensus 199 ~~~~~~~~~p~~~~~~v~~~~~~~~l~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~p~v~~~~ 278 (417)
...+..+..++.+..+|.++|+.+-.++...... .-....
T Consensus 176 -------------g~~lasg~~dg~i~iwd~~~~~~~~~~~~h~~~v---------------------------~~l~~s 215 (321)
T 3ow8_A 176 -------------GKYLASGAIDGIINIFDIATGKLLHTLEGHAMPI---------------------------RSLTFS 215 (321)
T ss_dssp -------------SSEEEEEETTSCEEEEETTTTEEEEEECCCSSCC---------------------------CEEEEC
T ss_pred -------------CCEEEEEcCCCeEEEEECCCCcEEEEEcccCCce---------------------------eEEEEc
Confidence 1234455677899999999999887665432210 001122
Q ss_pred cCCeeeeEEEEEcccceEEEEECCCCcEEEEeecCCCCCCCcceeccc--ccCCeEEEEeccCCceeeeec
Q 039692 279 TNGRFRDVVVAVQKSGFAWAFDRDSGDIIWFKLAGPGGREGGGVWGAA--TDGRRVYTNIVNNDRIIWSTA 347 (417)
Q Consensus 279 ~~G~~~~~v~~~~~~G~l~ald~~tG~~lW~~~~~~~~~~g~~~~~~~--~~~~~vy~~~~~~~~~~W~~~ 347 (417)
.+ +..|+.++.||.+...|..+++.+-....- . .....++ .++..++....+..-.+|...
T Consensus 216 pd---~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h----~-~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~ 278 (321)
T 3ow8_A 216 PD---SQLLVTASDDGYIKIYDVQHANLAGTLSGH----A-SWVLNVAFCPDDTHFVSSSSDKSVKVWDVG 278 (321)
T ss_dssp TT---SCEEEEECTTSCEEEEETTTCCEEEEECCC----S-SCEEEEEECTTSSEEEEEETTSCEEEEETT
T ss_pred CC---CCEEEEEcCCCeEEEEECCCcceeEEEcCC----C-CceEEEEECCCCCEEEEEeCCCcEEEEeCC
Confidence 23 357888899999999999999877554421 1 1112222 245555555555556777754
No 43
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=98.10 E-value=0.00018 Score=70.78 Aligned_cols=219 Identities=9% Similarity=0.002 Sum_probs=129.5
Q ss_pred ECCEEEEeccCCcEEEEECCCCccceEeecccc-cC---CcceeeEEeeeeeEEEEEecCCCceeeeee-cCCCCCccee
Q 039692 47 ANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKL-TG---LSGTGIVVNVTVAVVVAVSRSNGELVWSTQ-IDPRPRSQIT 121 (417)
Q Consensus 47 ~~g~v~v~~~~g~l~ald~~tG~~~W~~~~~~~-~~---~~p~~~v~~~~v~~l~ald~~tG~~~W~~~-~~~~~~~~~~ 121 (417)
.+..++.++.+|.|..+|.++|+.+.++..... +. ..+.-++..+..+.+..+|..+++...... ..... ..+.
T Consensus 182 ~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~-~~v~ 260 (435)
T 1p22_A 182 DERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHR-AAVN 260 (435)
T ss_dssp CSSEEEEEETTSCEEEEESSSCCEEEEECCCCSCEEEEECCTTEEEEEETTSCEEEEECSSSSCCEEEEEECCCS-SCEE
T ss_pred CCCEEEEEcCCCeEEEEECCCCcEEEEEcCCCCcEEEEEEcCCEEEEeeCCCcEEEEeCCCCCCceeeeEecCCC-CcEE
Confidence 466788888999999999999998877764321 10 011111112223888889988887654322 11111 1121
Q ss_pred eceeEEcCeEEEEeCCccCccccCcccCCCceEEEEeCCCCceeceeeecCCCCCCCCCCCCccccCCCceeecccCccc
Q 039692 122 MSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYSGAAVWGSSPAIDVIRRQKQ 201 (417)
Q Consensus 122 ~sp~v~~~~v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~~gg~~~~~~pa~d~~~~~~~ 201 (417)
+-...+..++++.. ++.|..+|.++++.+.++...... + ...+++.
T Consensus 261 -~~~~~~~~l~s~~~--------------dg~i~vwd~~~~~~~~~~~~~~~~-----------v--~~~~~~~------ 306 (435)
T 1p22_A 261 -VVDFDDKYIVSASG--------------DRTIKVWNTSTCEFVRTLNGHKRG-----------I--ACLQYRD------ 306 (435)
T ss_dssp -EEEEETTEEEEEET--------------TSEEEEEETTTCCEEEEEECCSSC-----------E--EEEEEET------
T ss_pred -EEEeCCCEEEEEeC--------------CCeEEEEECCcCcEEEEEcCCCCc-----------E--EEEEeCC------
Confidence 11224556666665 689999999999998876642110 0 0112221
Q ss_pred CCCCCCCCCCCCcccCCCCCCeEEEEECCCCceEEEecCCCCcceeeeccCCCCCCCCCCCCCCCccCCCceEEEEecCC
Q 039692 202 NNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTISTNG 281 (417)
Q Consensus 202 ~~~~~~p~~~~~~v~~~~~~~~l~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~p~v~~~~~~G 281 (417)
..+..+..++.+..+|.++|+.+..+...... +..+..+
T Consensus 307 -----------~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~-----------------------------v~~~~~~- 345 (435)
T 1p22_A 307 -----------RLVVSGSSDNTIRLWDIECGACLRVLEGHEEL-----------------------------VRCIRFD- 345 (435)
T ss_dssp -----------TEEEEEETTSCEEEEETTTCCEEEEECCCSSC-----------------------------EEEEECC-
T ss_pred -----------CEEEEEeCCCeEEEEECCCCCEEEEEeCCcCc-----------------------------EEEEEec-
Confidence 23445667889999999999998877643221 1223333
Q ss_pred eeeeEEEEEcccceEEEEECCCCc---------EEEEeecCCCCCCCcceecccccCCeEEEEeccCCceeeeecC
Q 039692 282 RFRDVVVAVQKSGFAWAFDRDSGD---------IIWFKLAGPGGREGGGVWGAATDGRRVYTNIVNNDRIIWSTAD 348 (417)
Q Consensus 282 ~~~~~v~~~~~~G~l~ald~~tG~---------~lW~~~~~~~~~~g~~~~~~~~~~~~vy~~~~~~~~~~W~~~~ 348 (417)
++.++.++.||.+...|..+++ .+.....- . .....++.++..++....++.-.+|....
T Consensus 346 --~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~h----~-~~v~~l~~~~~~l~s~s~Dg~i~iwd~~~ 414 (435)
T 1p22_A 346 --NKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEH----S-GRVFRLQFDEFQIVSSSHDDTILIWDFLN 414 (435)
T ss_dssp --SSEEEEEETTSCEEEEEHHHHTSTTSCTTTTEEEEECCC----S-SCCCCEEECSSCEEECCSSSEEEEEC---
T ss_pred --CCEEEEEeCCCcEEEEECCCCCCccccccchheeeccCC----C-CCeEEEEeCCCEEEEEeCCCEEEEEECCC
Confidence 3578888999999999987776 44444321 1 12223444666665555555567787654
No 44
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.08 E-value=0.00035 Score=64.60 Aligned_cols=204 Identities=11% Similarity=-0.016 Sum_probs=118.1
Q ss_pred cceeeeEEEeCCc-eeeCcEEEC-CEEEEecc---CCcEEEEECCCCccceEeecccccCCcceeeEEeeeeeEEEEEec
Q 039692 27 NLRLRWSFYAGKD-ISATPAVAN-GVVYFPSW---NGYLYAVNAFNGALIWEQNLSKLTGLSGTGIVVNVTVAVVVAVSR 101 (417)
Q Consensus 27 ~~~~~W~~~~~~~-~~~~p~~~~-g~v~v~~~---~g~l~ald~~tG~~~W~~~~~~~~~~~p~~~v~~~~v~~l~ald~ 101 (417)
+.+++=+++.+.. ......+.+ +++|+++. .+.|..||++||+++=+..++... .
T Consensus 8 ~~~vv~~~p~~~~~f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~----f---------------- 67 (266)
T 2iwa_A 8 IVEVLNEFPHDPYAFTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSY----F---------------- 67 (266)
T ss_dssp EEEEEEEEECCTTCCEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTC----C----------------
T ss_pred CceEEEEEECCCCCCcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCc----c----------------
Confidence 3455555555543 223334444 78888763 467778887777776655543211 1
Q ss_pred CCCceeeeeecCCCCCcceeeceeEEcCeEEEEeCCccCccccCcccCCCceEEEEeCCCCceeceeeec-CCCCCCCCC
Q 039692 102 SNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYML-PDNGGKRGG 180 (417)
Q Consensus 102 ~tG~~~W~~~~~~~~~~~~~~sp~v~~~~v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~~~W~~~~~-~~~~~~~~~ 180 (417)
...-++.++++|+.... ++.++.+|++|++++-+++.. +..
T Consensus 68 -------------------geGi~~~g~~lyv~t~~-------------~~~v~viD~~t~~v~~~i~~g~~~g------ 109 (266)
T 2iwa_A 68 -------------------GEGLTLLNEKLYQVVWL-------------KNIGFIYDRRTLSNIKNFTHQMKDG------ 109 (266)
T ss_dssp -------------------EEEEEEETTEEEEEETT-------------CSEEEEEETTTTEEEEEEECCSSSC------
T ss_pred -------------------eEEEEEeCCEEEEEEec-------------CCEEEEEECCCCcEEEEEECCCCCe------
Confidence 00122346678887764 689999999999999888764 221
Q ss_pred CCCccccCCCceeecccCcccCCCCCCCCCCCCcccCCCCCCeEEEEECCCCceEEEecCCCCcceeeeccCCCCCCCCC
Q 039692 181 YSGAAVWGSSPAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPP 260 (417)
Q Consensus 181 ~~gg~~~~~~pa~d~~~~~~~~~~~~~p~~~~~~v~~~~~~~~l~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~c~~ 260 (417)
| ..+.|.. .+|.....+.|+.||++|.+++-+.+.+..... +
T Consensus 110 ------~--glt~Dg~-----------------~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p-~------------ 151 (266)
T 2iwa_A 110 ------W--GLATDGK-----------------ILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHR-V------------ 151 (266)
T ss_dssp ------C--EEEECSS-----------------SEEEECSSSEEEEECTTTCCEEEEEECEETTEE-C------------
T ss_pred ------E--EEEECCC-----------------EEEEECCCCeEEEEECCCCcEEEEEEECCCCcc-c------------
Confidence 1 1222322 233444568999999999999887776532100 0
Q ss_pred CCCCCCccCCCceEEEEecCCeeeeEEEEEc-ccceEEEEECCCCcEEEEeecCC--------CCCCCcceecccc--cC
Q 039692 261 GPNLDADFGEAPMLLTISTNGRFRDVVVAVQ-KSGFAWAFDRDSGDIIWFKLAGP--------GGREGGGVWGAAT--DG 329 (417)
Q Consensus 261 ~~~~~~~~~~~p~v~~~~~~G~~~~~v~~~~-~~G~l~ald~~tG~~lW~~~~~~--------~~~~g~~~~~~~~--~~ 329 (417)
...+..... + +.+|+.. .++.+..||+++|+++=+.+.+. .........++++ ++
T Consensus 152 ------~~~nele~~----d----g~lyvn~~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~ 217 (266)
T 2iwa_A 152 ------IRLNELEYI----N----GEVWANIWQTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQEN 217 (266)
T ss_dssp ------CCEEEEEEE----T----TEEEEEETTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTT
T ss_pred ------ccceeEEEE----C----CEEEEecCCCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCC
Confidence 000011111 2 3577775 46799999999999987777530 0000111224444 45
Q ss_pred CeEEEEeccCC
Q 039692 330 RRVYTNIVNND 340 (417)
Q Consensus 330 ~~vy~~~~~~~ 340 (417)
+++|++.....
T Consensus 218 ~~lfVTgk~~~ 228 (266)
T 2iwa_A 218 KRIFVTGKLWP 228 (266)
T ss_dssp TEEEEEETTCS
T ss_pred CEEEEECCCCC
Confidence 78888875544
No 45
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.08 E-value=0.0001 Score=67.74 Aligned_cols=153 Identities=9% Similarity=0.064 Sum_probs=100.9
Q ss_pred eCcEEECCEEEEecc-CCcEEEEECCCCccceEeecccccCCcceeeEEee---ee-----eEEEEEecCCCceeeeeec
Q 039692 42 ATPAVANGVVYFPSW-NGYLYAVNAFNGALIWEQNLSKLTGLSGTGIVVNV---TV-----AVVVAVSRSNGELVWSTQI 112 (417)
Q Consensus 42 ~~p~~~~g~v~v~~~-~g~l~ald~~tG~~~W~~~~~~~~~~~p~~~v~~~---~v-----~~l~ald~~tG~~~W~~~~ 112 (417)
....+.++.||+++. +|.|..+|++||+++-+. ++.... +.++...+ ++ +.++.+|++|++++=+++.
T Consensus 58 qGL~~~~~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~~~~F--geGit~~g~~Ly~ltw~~~~v~V~D~~Tl~~~~ti~~ 134 (268)
T 3nok_A 58 QGLVFHQGHFFESTGHQGTLRQLSLESAQPVWME-RLGNIF--AEGLASDGERLYQLTWTEGLLFTWSGMPPQRERTTRY 134 (268)
T ss_dssp EEEEEETTEEEEEETTTTEEEECCSSCSSCSEEE-ECTTCC--EEEEEECSSCEEEEESSSCEEEEEETTTTEEEEEEEC
T ss_pred ceEEEECCEEEEEcCCCCEEEEEECCCCcEEeEE-CCCCcc--eeEEEEeCCEEEEEEccCCEEEEEECCcCcEEEEEeC
Confidence 445567899999874 578999999999999998 765322 11222222 22 8999999999999999987
Q ss_pred CCCCCcceeeceeEEcCeEEEEeCCccCccccCcccCCCceEEEEeCCCCceeceeeecCCCCCCCCCCCCccccCCCce
Q 039692 113 DPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYSGAAVWGSSPA 192 (417)
Q Consensus 113 ~~~~~~~~~~sp~v~~~~v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~~gg~~~~~~pa 192 (417)
..+.. ..+ -.++.+|+... ++.|+-+|++|.+++=+.+....... +- ...-
T Consensus 135 ~~eGw---GLt--~Dg~~L~vSdG--------------s~~l~~iDp~T~~v~~~I~V~~~g~~---------v~-~lNe 185 (268)
T 3nok_A 135 SGEGW---GLC--YWNGKLVRSDG--------------GTMLTFHEPDGFALVGAVQVKLRGQP---------VE-LINE 185 (268)
T ss_dssp SSCCC---CEE--EETTEEEEECS--------------SSEEEEECTTTCCEEEEEECEETTEE---------CC-CEEE
T ss_pred CCcee---EEe--cCCCEEEEECC--------------CCEEEEEcCCCCeEEEEEEeCCCCcc---------cc-cccc
Confidence 64421 111 24667887653 47999999999999877766321110 00 0000
Q ss_pred eecccCcccCCCCCCCCCCCCcccCCCC-CCeEEEEECCCCceEEEecCC
Q 039692 193 IDVIRRQKQNNQTTKPTHPDQCISSDIY-ANSIVALDIDSGRIAWAKPLG 241 (417)
Q Consensus 193 ~d~~~~~~~~~~~~~p~~~~~~v~~~~~-~~~l~ald~~tG~~~W~~~~~ 241 (417)
++. .++.+|++.+ .+.|..||++||+++=..+..
T Consensus 186 Le~---------------~dG~lyanvw~s~~I~vIDp~TG~V~~~Idl~ 220 (268)
T 3nok_A 186 LEC---------------ANGVIYANIWHSSDVLEIDPATGTVVGVIDAS 220 (268)
T ss_dssp EEE---------------ETTEEEEEETTCSEEEEECTTTCBEEEEEECH
T ss_pred cEE---------------eCCEEEEEECCCCeEEEEeCCCCcEEEEEECC
Confidence 000 1233455443 578999999999998777764
No 46
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=98.08 E-value=0.002 Score=60.71 Aligned_cols=218 Identities=13% Similarity=0.118 Sum_probs=130.6
Q ss_pred CEEEEeccCCcEEEEECCCCccceEeeccccc----CCccee--eEEeeeeeEEEEEecCCCceeeeeecCCCCCcceee
Q 039692 49 GVVYFPSWNGYLYAVNAFNGALIWEQNLSKLT----GLSGTG--IVVNVTVAVVVAVSRSNGELVWSTQIDPRPRSQITM 122 (417)
Q Consensus 49 g~v~v~~~~g~l~ald~~tG~~~W~~~~~~~~----~~~p~~--~v~~~~v~~l~ald~~tG~~~W~~~~~~~~~~~~~~ 122 (417)
..++.++.++.|...|.++|+.+.++...... ..+|.+ ++.....+.+..+|.++++..++..........+..
T Consensus 93 ~~l~s~s~D~~i~lWd~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~~~~~~~~~~~v~~~~~ 172 (321)
T 3ow8_A 93 PIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAY 172 (321)
T ss_dssp SEEEEEETTSEEEEEETTTTEEEEEEECCTTCCCCEEECTTSSEEEEECTTSEEEEEETTTCSEEEEEECSSSCEEEEEE
T ss_pred CEEEEEeCCCcEEEEECCCCCEEEEEeCCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCCCceeEEecCCCceEEEEEE
Confidence 35666778999999999999998887655321 112211 122223488999999999998887754332222233
Q ss_pred ceeEEcCe-EEEEeCCccCccccCcccCCCceEEEEeCCCCceeceeeecCCCCCCCCCCCCccccCCCceeecccCccc
Q 039692 123 SGSVYMGA-FYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYSGAAVWGSSPAIDVIRRQKQ 201 (417)
Q Consensus 123 sp~v~~~~-v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~~gg~~~~~~pa~d~~~~~~~ 201 (417)
+| ++. ++.+.. ++.|..+|.++|+.+-+++..... + ...++.++
T Consensus 173 sp---dg~~lasg~~--------------dg~i~iwd~~~~~~~~~~~~h~~~-----------v--~~l~~spd----- 217 (321)
T 3ow8_A 173 SP---DGKYLASGAI--------------DGIINIFDIATGKLLHTLEGHAMP-----------I--RSLTFSPD----- 217 (321)
T ss_dssp CT---TSSEEEEEET--------------TSCEEEEETTTTEEEEEECCCSSC-----------C--CEEEECTT-----
T ss_pred CC---CCCEEEEEcC--------------CCeEEEEECCCCcEEEEEcccCCc-----------e--eEEEEcCC-----
Confidence 33 444 445544 689999999999987665431110 0 11233222
Q ss_pred CCCCCCCCCCCCcccCCCCCCeEEEEECCCCceEEEecCCCCcceeeeccCCCCCCCCCCCCCCCccCCCceEEEEecCC
Q 039692 202 NNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTISTNG 281 (417)
Q Consensus 202 ~~~~~~p~~~~~~v~~~~~~~~l~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~p~v~~~~~~G 281 (417)
...+..+..++.+...|.++++.+-........ ..-.....+|
T Consensus 218 ----------~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~---------------------------v~~~~~sp~~ 260 (321)
T 3ow8_A 218 ----------SQLLVTASDDGYIKIYDVQHANLAGTLSGHASW---------------------------VLNVAFCPDD 260 (321)
T ss_dssp ----------SCEEEEECTTSCEEEEETTTCCEEEEECCCSSC---------------------------EEEEEECTTS
T ss_pred ----------CCEEEEEcCCCeEEEEECCCcceeEEEcCCCCc---------------------------eEEEEECCCC
Confidence 123445667788999999988876554432211 0111222333
Q ss_pred eeeeEEEEEcccceEEEEECCCCcEEEEeecCCCCCCCcceeccc--ccCCeEEEEeccCCceeeee
Q 039692 282 RFRDVVVAVQKSGFAWAFDRDSGDIIWFKLAGPGGREGGGVWGAA--TDGRRVYTNIVNNDRIIWST 346 (417)
Q Consensus 282 ~~~~~v~~~~~~G~l~ald~~tG~~lW~~~~~~~~~~g~~~~~~~--~~~~~vy~~~~~~~~~~W~~ 346 (417)
..++.++.|+.+...|..+++.+-....- . .....++ .++..|.....++.-.+|..
T Consensus 261 ---~~l~s~s~D~~v~iwd~~~~~~~~~~~~h----~-~~v~~v~~s~~g~~l~s~~~d~~i~vwd~ 319 (321)
T 3ow8_A 261 ---THFVSSSSDKSVKVWDVGTRTCVHTFFDH----Q-DQVWGVKYNGNGSKIVSVGDDQEIHIYDC 319 (321)
T ss_dssp ---SEEEEEETTSCEEEEETTTTEEEEEECCC----S-SCEEEEEECTTSSEEEEEETTCCEEEEEC
T ss_pred ---CEEEEEeCCCcEEEEeCCCCEEEEEEcCC----C-CcEEEEEECCCCCEEEEEeCCCeEEEEeC
Confidence 57888889999999999999888766431 1 1222233 24455655555555567764
No 47
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=98.05 E-value=0.0015 Score=64.36 Aligned_cols=218 Identities=11% Similarity=0.008 Sum_probs=124.0
Q ss_pred cCccccccceeeeEEEeCCceeeCcEEE-CCEEEEeccCCcEEEEECCCCccceEeeccc-ccC---Cc--ce--eeEEe
Q 039692 20 INPVTVRNLRLRWSFYAGKDISATPAVA-NGVVYFPSWNGYLYAVNAFNGALIWEQNLSK-LTG---LS--GT--GIVVN 90 (417)
Q Consensus 20 i~~~~~~~~~~~W~~~~~~~~~~~p~~~-~g~v~v~~~~g~l~ald~~tG~~~W~~~~~~-~~~---~~--p~--~~v~~ 90 (417)
|...+..+++..+.+......-...... ++.++.++.++.|..+|.++|+.+..+.... .+. .. +. -++..
T Consensus 144 i~vwd~~~~~~~~~~~~h~~~V~~l~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~ 223 (464)
T 3v7d_B 144 IRVYDSINKKFLLQLSGHDGGVWALKYAHGGILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTG 223 (464)
T ss_dssp EEEEETTTTEEEEEECCCSSCEEEEEECSTTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEEESSSCEEEEEE
T ss_pred EEEEECCCCcEEEEEeCCCcCEEEEEEcCCCEEEEEeCCCCEEEEECCCCcEEEEECCCCCccEEEEEecCCCCCEEEEE
Confidence 3444445555555544222111111222 5688888899999999999999887766432 111 00 00 00111
Q ss_pred eeeeEEEEEecCCCceeeeeecCCCC--------------------CcceeeceeEEcCeEEEEeCCccCccccCcccCC
Q 039692 91 VTVAVVVAVSRSNGELVWSTQIDPRP--------------------RSQITMSGSVYMGAFYVGLSSLEEALPADQCCTF 150 (417)
Q Consensus 91 ~~v~~l~ald~~tG~~~W~~~~~~~~--------------------~~~~~~sp~v~~~~v~v~~~~~~~~~~~~~~~~~ 150 (417)
...+.+..+|..+++........... ...+. .-...+..++++..
T Consensus 224 s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~~~~~~~~l~~~~~-------------- 288 (464)
T 3v7d_B 224 SRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVR-TVSGHGNIVVSGSY-------------- 288 (464)
T ss_dssp ETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEE-EEEEETTEEEEEET--------------
T ss_pred cCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEE-EEcCCCCEEEEEeC--------------
Confidence 12277788887777655432211100 00000 00123445666655
Q ss_pred CceEEEEeCCCCceeceeeecCCCCCCCCCCCCccccCCCceeecccCcccCCCCCCCCCCCCcccCCCCCCeEEEEECC
Q 039692 151 RGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYSGAAVWGSSPAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDID 230 (417)
Q Consensus 151 ~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~~gg~~~~~~pa~d~~~~~~~~~~~~~p~~~~~~v~~~~~~~~l~ald~~ 230 (417)
++.|..+|..+++.+.++..... .+. ..+++++. ..+..+..++.+..+|.+
T Consensus 289 d~~i~vwd~~~~~~~~~~~~~~~-----------~v~--~~~~~~~~---------------~~l~sg~~dg~i~vwd~~ 340 (464)
T 3v7d_B 289 DNTLIVWDVAQMKCLYILSGHTD-----------RIY--STIYDHER---------------KRCISASMDTTIRIWDLE 340 (464)
T ss_dssp TSCEEEEETTTTEEEEEECCCSS-----------CEE--EEEEETTT---------------TEEEEEETTSCEEEEETT
T ss_pred CCeEEEEECCCCcEEEEecCCCC-----------CEE--EEEEcCCC---------------CEEEEEeCCCcEEEEECC
Confidence 68999999999999877653211 011 12333321 234456678899999999
Q ss_pred CCceEEEecCCCCcceeeeccCCCCCCCCCCCCCCCccCCCceEEEEecCCeeeeEEEEEcccceEEEEECCCCcEEEEe
Q 039692 231 SGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDIIWFK 310 (417)
Q Consensus 231 tG~~~W~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~p~v~~~~~~G~~~~~v~~~~~~G~l~ald~~tG~~lW~~ 310 (417)
+|+.+..+...... +..+..+ ++.++.++.||.+...|..+++..+..
T Consensus 341 ~~~~~~~~~~h~~~-----------------------------v~~~~~~---~~~l~s~s~dg~v~vwd~~~~~~~~~~ 388 (464)
T 3v7d_B 341 NGELMYTLQGHTAL-----------------------------VGLLRLS---DKFLVSAAADGSIRGWDANDYSRKFSY 388 (464)
T ss_dssp TTEEEEEECCCSSC-----------------------------EEEEEEC---SSEEEEEETTSEEEEEETTTCCEEEEE
T ss_pred CCcEEEEEeCCCCc-----------------------------EEEEEEc---CCEEEEEeCCCcEEEEECCCCceeeee
Confidence 99998887643221 1122223 357888899999999999999988887
Q ss_pred ec
Q 039692 311 LA 312 (417)
Q Consensus 311 ~~ 312 (417)
..
T Consensus 389 ~~ 390 (464)
T 3v7d_B 389 HH 390 (464)
T ss_dssp EC
T ss_pred cC
Confidence 64
No 48
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=98.04 E-value=0.00048 Score=64.70 Aligned_cols=131 Identities=18% Similarity=0.232 Sum_probs=79.6
Q ss_pred cCccccccceeeeEEEeCCce-eeCcEEE-CC-EEEEec-cCCcEEEEECCCCccceEeecccc----------cCCcce
Q 039692 20 INPVTVRNLRLRWSFYAGKDI-SATPAVA-NG-VVYFPS-WNGYLYAVNAFNGALIWEQNLSKL----------TGLSGT 85 (417)
Q Consensus 20 i~~~~~~~~~~~W~~~~~~~~-~~~p~~~-~g-~v~v~~-~~g~l~ald~~tG~~~W~~~~~~~----------~~~~p~ 85 (417)
|...+..++++.+++..+... ...+.+. ++ .+|+.+ .++.|+.+|+++|+.+++...... +..+|.
T Consensus 23 v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~spd 102 (349)
T 1jmx_B 23 LHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPD 102 (349)
T ss_dssp EEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESCCSTTEEEECSSCEEECTT
T ss_pred EEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEcccccccccccccceEECCC
Confidence 666667788888888776521 1223333 34 577665 578999999999999998876431 112232
Q ss_pred e--eEEeee------------eeEEEEEecCCCceeeeee---cCCCCCcceeeceeEEcCeEEEEeCCccCccccCccc
Q 039692 86 G--IVVNVT------------VAVVVAVSRSNGELVWSTQ---IDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCC 148 (417)
Q Consensus 86 ~--~v~~~~------------v~~l~ald~~tG~~~W~~~---~~~~~~~~~~~sp~v~~~~v~v~~~~~~~~~~~~~~~ 148 (417)
+ ++.... -+.|+.+|.++|++.-... .... ...+..+| ++++|+..
T Consensus 103 g~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~-~~~~~~s~---dg~l~~~~------------- 165 (349)
T 1jmx_B 103 GKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQ-VYLMRAAD---DGSLYVAG------------- 165 (349)
T ss_dssp SSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECCSS-CCCEEECT---TSCEEEES-------------
T ss_pred CCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccCCCc-ccceeECC---CCcEEEcc-------------
Confidence 1 111111 1789999998876543322 2111 11122333 66677742
Q ss_pred CCCceEEEEeCCCCceeceeee
Q 039692 149 TFRGSLAKLDVRNGRIIWQTYM 170 (417)
Q Consensus 149 ~~~g~l~ald~~tG~~~W~~~~ 170 (417)
+.|+.+|.++|+++..++.
T Consensus 166 ---~~i~~~d~~~~~~~~~~~~ 184 (349)
T 1jmx_B 166 ---PDIYKMDVKTGKYTVALPL 184 (349)
T ss_dssp ---SSEEEECTTTCCEEEEECS
T ss_pred ---CcEEEEeCCCCceeccccc
Confidence 3599999999999887665
No 49
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.01 E-value=0.00098 Score=61.54 Aligned_cols=104 Identities=9% Similarity=-0.030 Sum_probs=66.1
Q ss_pred eEEEEEecCCCceeeeeecC-CCCCcceeeceeEEcCeEEEEeCCccCccccCcccCCCceEEEEeCCCCceeceeeecC
Q 039692 94 AVVVAVSRSNGELVWSTQID-PRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYMLP 172 (417)
Q Consensus 94 ~~l~ald~~tG~~~W~~~~~-~~~~~~~~~sp~v~~~~v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~~~W~~~~~~ 172 (417)
+.+..+|++|++++-+++.+ ++. ...++ .++++|+... ++.|+.+|++|.+++=+.....
T Consensus 86 ~~v~viD~~t~~v~~~i~~g~~~g---~glt~--Dg~~l~vs~g--------------s~~l~viD~~t~~v~~~I~Vg~ 146 (266)
T 2iwa_A 86 NIGFIYDRRTLSNIKNFTHQMKDG---WGLAT--DGKILYGSDG--------------TSILYEIDPHTFKLIKKHNVKY 146 (266)
T ss_dssp SEEEEEETTTTEEEEEEECCSSSC---CEEEE--CSSSEEEECS--------------SSEEEEECTTTCCEEEEEECEE
T ss_pred CEEEEEECCCCcEEEEEECCCCCe---EEEEE--CCCEEEEECC--------------CCeEEEEECCCCcEEEEEEECC
Confidence 56788999999999998876 321 22222 3567888653 4799999999999887777632
Q ss_pred CCCCCCCCCCCccccCCCceeecccCcccCCCCCCCCCCCCcccCCC-CCCeEEEEECCCCceEEEecCC
Q 039692 173 DNGGKRGGYSGAAVWGSSPAIDVIRRQKQNNQTTKPTHPDQCISSDI-YANSIVALDIDSGRIAWAKPLG 241 (417)
Q Consensus 173 ~~~~~~~~~~gg~~~~~~pa~d~~~~~~~~~~~~~p~~~~~~v~~~~-~~~~l~ald~~tG~~~W~~~~~ 241 (417)
...... ... ...+. ++.+|++. ..+.|..||++||+++=+.+..
T Consensus 147 ~~~p~~------~~n--ele~~-----------------dg~lyvn~~~~~~V~vID~~tg~V~~~I~~~ 191 (266)
T 2iwa_A 147 NGHRVI------RLN--ELEYI-----------------NGEVWANIWQTDCIARISAKDGTLLGWILLP 191 (266)
T ss_dssp TTEECC------CEE--EEEEE-----------------TTEEEEEETTSSEEEEEETTTCCEEEEEECH
T ss_pred CCcccc------cce--eEEEE-----------------CCEEEEecCCCCeEEEEECCCCcEEEEEECC
Confidence 110000 000 00010 12344443 3578999999999998777764
No 50
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=98.00 E-value=0.0018 Score=60.15 Aligned_cols=217 Identities=13% Similarity=0.080 Sum_probs=123.5
Q ss_pred CCEEEEeccCCcEEEEECCCCccceEeecccccC------Cccee--eEEeeeeeEEEEEecCCCceeeeeecCCCCCcc
Q 039692 48 NGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG------LSGTG--IVVNVTVAVVVAVSRSNGELVWSTQIDPRPRSQ 119 (417)
Q Consensus 48 ~g~v~v~~~~g~l~ald~~tG~~~W~~~~~~~~~------~~p~~--~v~~~~v~~l~ald~~tG~~~W~~~~~~~~~~~ 119 (417)
+..+++++.++.|..+|.++++..-...+..... .+|.+ ++.....+.++.+|..+++.+.+.+........
T Consensus 109 ~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~i~~ 188 (337)
T 1gxr_A 109 GCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASC 188 (337)
T ss_dssp SSEEEEEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEE
T ss_pred CCEEEEEcCCCcEEEEECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCceeeeeecccCceEE
Confidence 3467788889999999999888444333322111 11110 111112388999999999988877643222112
Q ss_pred eeeceeEEcCeEEEEeCCccCccccCcccCCCceEEEEeCCCCceeceeeecCCCCCCCCCCCCccccCCCceeecccCc
Q 039692 120 ITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYSGAAVWGSSPAIDVIRRQ 199 (417)
Q Consensus 120 ~~~sp~v~~~~v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~~gg~~~~~~pa~d~~~~~ 199 (417)
+..+| .+..++++.. ++.|..+|.++++.+..+..... + ...++.++
T Consensus 189 ~~~~~--~~~~l~~~~~--------------dg~i~~~d~~~~~~~~~~~~~~~------------v--~~~~~s~~--- 235 (337)
T 1gxr_A 189 IDISN--DGTKLWTGGL--------------DNTVRSWDLREGRQLQQHDFTSQ------------I--FSLGYCPT--- 235 (337)
T ss_dssp EEECT--TSSEEEEEET--------------TSEEEEEETTTTEEEEEEECSSC------------E--EEEEECTT---
T ss_pred EEECC--CCCEEEEEec--------------CCcEEEEECCCCceEeeecCCCc------------e--EEEEECCC---
Confidence 22233 1334555554 68999999999998887654210 0 01222221
Q ss_pred ccCCCCCCCCCCCCcccCCCCCCeEEEEECCCCceEEEecCCCCcceeeeccCCCCCCCCCCCCCCCccCCCceEEEEec
Q 039692 200 KQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTIST 279 (417)
Q Consensus 200 ~~~~~~~~p~~~~~~v~~~~~~~~l~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~p~v~~~~~ 279 (417)
...+..+..++.+..+|.++++... ...... ...-.....
T Consensus 236 ------------~~~l~~~~~~~~i~~~~~~~~~~~~-~~~~~~---------------------------~v~~~~~~~ 275 (337)
T 1gxr_A 236 ------------GEWLAVGMESSNVEVLHVNKPDKYQ-LHLHES---------------------------CVLSLKFAY 275 (337)
T ss_dssp ------------SSEEEEEETTSCEEEEETTSSCEEE-ECCCSS---------------------------CEEEEEECT
T ss_pred ------------CCEEEEEcCCCcEEEEECCCCCeEE-EcCCcc---------------------------ceeEEEECC
Confidence 1223444567788899988887642 221111 111112223
Q ss_pred CCeeeeEEEEEcccceEEEEECCCCcEEEEeecCCCCCCCcceec--ccccCCeEEEEeccCCceeeee
Q 039692 280 NGRFRDVVVAVQKSGFAWAFDRDSGDIIWFKLAGPGGREGGGVWG--AATDGRRVYTNIVNNDRIIWST 346 (417)
Q Consensus 280 ~G~~~~~v~~~~~~G~l~ald~~tG~~lW~~~~~~~~~~g~~~~~--~~~~~~~vy~~~~~~~~~~W~~ 346 (417)
+ ++.++.++.+|.++.+|..+++.+...... ..... ...++..++....++.-.+|+.
T Consensus 276 ~---~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~------~~v~~~~~s~~~~~l~~~~~dg~i~iw~~ 335 (337)
T 1gxr_A 276 C---GKWFVSTGKDNLLNAWRTPYGASIFQSKES------SSVLSCDISVDDKYIVTGSGDKKATVYEV 335 (337)
T ss_dssp T---SSEEEEEETTSEEEEEETTTCCEEEEEECS------SCEEEEEECTTSCEEEEEETTSCEEEEEE
T ss_pred C---CCEEEEecCCCcEEEEECCCCeEEEEecCC------CcEEEEEECCCCCEEEEecCCCeEEEEEE
Confidence 3 357888889999999999999999766532 11222 2335566666666555667764
No 51
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=97.98 E-value=0.0056 Score=56.70 Aligned_cols=192 Identities=15% Similarity=0.054 Sum_probs=114.1
Q ss_pred CCEEEEeccCCcEEEEECCCCccceEeecccc-c---CCccee--eEEeeeeeEEEEEecCCCceeeeeecCCCCCccee
Q 039692 48 NGVVYFPSWNGYLYAVNAFNGALIWEQNLSKL-T---GLSGTG--IVVNVTVAVVVAVSRSNGELVWSTQIDPRPRSQIT 121 (417)
Q Consensus 48 ~g~v~v~~~~g~l~ald~~tG~~~W~~~~~~~-~---~~~p~~--~v~~~~v~~l~ald~~tG~~~W~~~~~~~~~~~~~ 121 (417)
+..++.++.++.+...|..+|+..-.+..... + ..+|.+ ++..+..+.+..+|..+++.+-+.+........+.
T Consensus 35 ~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~ 114 (312)
T 4ery_A 35 GEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCN 114 (312)
T ss_dssp SSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEE
T ss_pred CCEEEEeeCCCeEEEEeCCCcccchhhccCCCceEEEEEcCCCCEEEEECCCCEEEEEECCCCcEEEEEcCCCCCEEEEE
Confidence 34677778899999999999987665543321 1 111111 11112238899999999988877663322111122
Q ss_pred eceeEEcCeEEEEeCCccCccccCcccCCCceEEEEeCCCCceeceeeecCCCCCCCCCCCCccccCCCceeecccCccc
Q 039692 122 MSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYSGAAVWGSSPAIDVIRRQKQ 201 (417)
Q Consensus 122 ~sp~v~~~~v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~~gg~~~~~~pa~d~~~~~~~ 201 (417)
..| .+..++.+.. ++.|..+|.++++.+..+..... .+. ..++.++
T Consensus 115 ~~~--~~~~l~s~~~--------------d~~i~iwd~~~~~~~~~~~~~~~-----------~v~--~~~~~~~----- 160 (312)
T 4ery_A 115 FNP--QSNLIVSGSF--------------DESVRIWDVKTGKCLKTLPAHSD-----------PVS--AVHFNRD----- 160 (312)
T ss_dssp ECS--SSSEEEEEET--------------TSCEEEEETTTCCEEEEECCCSS-----------CEE--EEEECTT-----
T ss_pred EcC--CCCEEEEEeC--------------CCcEEEEECCCCEEEEEecCCCC-----------cEE--EEEEcCC-----
Confidence 222 1334555554 68999999999988766543111 000 1122221
Q ss_pred CCCCCCCCCCCCcccCCCCCCeEEEEECCCCceEEEecCCCCcceeeeccCCCCCCCCCCCCCCCccCCCceEEEEecCC
Q 039692 202 NNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTISTNG 281 (417)
Q Consensus 202 ~~~~~~p~~~~~~v~~~~~~~~l~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~p~v~~~~~~G 281 (417)
...+..+..++.+..+|.++++.+-........ .........+|
T Consensus 161 ----------~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~--------------------------~~~~~~~~~~~ 204 (312)
T 4ery_A 161 ----------GSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNP--------------------------PVSFVKFSPNG 204 (312)
T ss_dssp ----------SSEEEEEETTSCEEEEETTTCCEEEEECCSSCC--------------------------CEEEEEECTTS
T ss_pred ----------CCEEEEEeCCCcEEEEECCCCceeeEEeccCCC--------------------------ceEEEEECCCC
Confidence 123445567788999999999877655432211 01112223343
Q ss_pred eeeeEEEEEcccceEEEEECCCCcEEEEeec
Q 039692 282 RFRDVVVAVQKSGFAWAFDRDSGDIIWFKLA 312 (417)
Q Consensus 282 ~~~~~v~~~~~~G~l~ald~~tG~~lW~~~~ 312 (417)
+.++.++.+|.+...|..+++.+.....
T Consensus 205 ---~~l~~~~~d~~i~iwd~~~~~~~~~~~~ 232 (312)
T 4ery_A 205 ---KYILAATLDNTLKLWDYSKGKCLKTYTG 232 (312)
T ss_dssp ---SEEEEEETTTEEEEEETTTTEEEEEECS
T ss_pred ---CEEEEEcCCCeEEEEECCCCcEEEEEEe
Confidence 5788888999999999999998877653
No 52
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=97.98 E-value=0.0014 Score=64.58 Aligned_cols=215 Identities=8% Similarity=0.056 Sum_probs=125.9
Q ss_pred CEEEEeccCCcEEEEECCCCccceEeeccccc-------------------CCcce-eeEEee-------eeeEEEEEec
Q 039692 49 GVVYFPSWNGYLYAVNAFNGALIWEQNLSKLT-------------------GLSGT-GIVVNV-------TVAVVVAVSR 101 (417)
Q Consensus 49 g~v~v~~~~g~l~ald~~tG~~~W~~~~~~~~-------------------~~~p~-~~v~~~-------~v~~l~ald~ 101 (417)
..++.++.++.+..+|.++++........... ...++ .+..++ ..+.++.+|.
T Consensus 218 ~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~vwd~ 297 (464)
T 3v7d_B 218 KYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGNIVVSGSYDNTLIVWDV 297 (464)
T ss_dssp EEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEEEEETTEEEEEETTSCEEEEET
T ss_pred CEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEEcCCCCEEEEEeCCCeEEEEEC
Confidence 45777788999999999988876543222100 00010 001111 1288999999
Q ss_pred CCCceeeeeecCCCCCcceeeceeEEcCeEEEEeCCccCccccCcccCCCceEEEEeCCCCceeceeeecCCCCCCCCCC
Q 039692 102 SNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGY 181 (417)
Q Consensus 102 ~tG~~~W~~~~~~~~~~~~~~sp~v~~~~v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~ 181 (417)
.+++.+.+..........+..+| .+..++.+.. ++.|..+|.++|+.+.++......
T Consensus 298 ~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~sg~~--------------dg~i~vwd~~~~~~~~~~~~h~~~------- 354 (464)
T 3v7d_B 298 AQMKCLYILSGHTDRIYSTIYDH--ERKRCISASM--------------DTTIRIWDLENGELMYTLQGHTAL------- 354 (464)
T ss_dssp TTTEEEEEECCCSSCEEEEEEET--TTTEEEEEET--------------TSCEEEEETTTTEEEEEECCCSSC-------
T ss_pred CCCcEEEEecCCCCCEEEEEEcC--CCCEEEEEeC--------------CCcEEEEECCCCcEEEEEeCCCCc-------
Confidence 99999887763222111122222 1345666655 689999999999998876542110
Q ss_pred CCccccCCCceeecccCcccCCCCCCCCCCCCcccCCCCCCeEEEEECCCCceEEEecCCCCcceeeeccCCCCCCCCCC
Q 039692 182 SGAAVWGSSPAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPG 261 (417)
Q Consensus 182 ~gg~~~~~~pa~d~~~~~~~~~~~~~p~~~~~~v~~~~~~~~l~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~c~~~ 261 (417)
+ ...+++ +..+..+..++.+..+|.++++..+........
T Consensus 355 ----v--~~~~~~-----------------~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~----------------- 394 (464)
T 3v7d_B 355 ----V--GLLRLS-----------------DKFLVSAAADGSIRGWDANDYSRKFSYHHTNLS----------------- 394 (464)
T ss_dssp ----E--EEEEEC-----------------SSEEEEEETTSEEEEEETTTCCEEEEEECTTCC-----------------
T ss_pred ----E--EEEEEc-----------------CCEEEEEeCCCcEEEEECCCCceeeeecCCCCc-----------------
Confidence 0 011121 123445667899999999999988877533211
Q ss_pred CCCCCccCCCceEEEEecCCeeeeEEEEEcccceEEEEECCCCcEEEEeecCCCCCCCcceecccccCCeEEEEeccCCc
Q 039692 262 PNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDIIWFKLAGPGGREGGGVWGAATDGRRVYTNIVNNDR 341 (417)
Q Consensus 262 ~~~~~~~~~~p~v~~~~~~G~~~~~v~~~~~~G~l~ald~~tG~~lW~~~~~~~~~~g~~~~~~~~~~~~vy~~~~~~~~ 341 (417)
....+..+ +..++.++ +|.+...|.++|+++.+..... ......++.+++.+++...+++.
T Consensus 395 -----------~~~~~~~~---~~~l~~~~-dg~i~iwd~~~g~~~~~~~~~~----~~~v~~v~~~~~~l~~~~~~~g~ 455 (464)
T 3v7d_B 395 -----------AITTFYVS---DNILVSGS-ENQFNIYNLRSGKLVHANILKD----ADQIWSVNFKGKTLVAAVEKDGQ 455 (464)
T ss_dssp -----------CEEEEEEC---SSEEEEEE-TTEEEEEETTTCCEEESCTTTT----CSEEEEEEEETTEEEEEEEETTE
T ss_pred -----------cEEEEEeC---CCEEEEec-CCeEEEEECCCCcEEehhhccC----CCcEEEEEecCCEEEEEEEeCCe
Confidence 11112223 34555555 8999999999999997644321 13344566678877777766665
Q ss_pred eeee
Q 039692 342 IIWS 345 (417)
Q Consensus 342 ~~W~ 345 (417)
..|.
T Consensus 456 ~~i~ 459 (464)
T 3v7d_B 456 SFLE 459 (464)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 5443
No 53
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=97.97 E-value=0.00023 Score=64.69 Aligned_cols=168 Identities=11% Similarity=0.060 Sum_probs=107.3
Q ss_pred eeeeEEEeCC-ceeeCcEEECCEEEEeccC---CcEEEEECCCCccceEeecccccCCcceeeEE-ee--ee-----eEE
Q 039692 29 RLRWSFYAGK-DISATPAVANGVVYFPSWN---GYLYAVNAFNGALIWEQNLSKLTGLSGTGIVV-NV--TV-----AVV 96 (417)
Q Consensus 29 ~~~W~~~~~~-~~~~~p~~~~g~v~v~~~~---g~l~ald~~tG~~~W~~~~~~~~~~~p~~~v~-~~--~v-----~~l 96 (417)
+++=+++... .+.-...+.++.+|+++.. +.|..+|++||+++=+..++.... +.++.. +. ++ +.+
T Consensus 10 ~v~~~~phd~~~ftqGL~~~~~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~f--geGi~~~~~~ly~ltw~~~~v 87 (243)
T 3mbr_X 10 RVVKRYPHDTTAFTEGLFYLRGHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYF--GAGIVAWRDRLIQLTWRNHEG 87 (243)
T ss_dssp EEEEEEECCTTCCEEEEEEETTEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCC--EEEEEEETTEEEEEESSSSEE
T ss_pred EEEEEcCCCCccccccEEEECCEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcc--eeEEEEeCCEEEEEEeeCCEE
Confidence 3333444433 2334456678999999754 489999999999998888875432 122222 12 22 899
Q ss_pred EEEecCCCceeeeeecCCCCCcceeeceeEEcCeEEEEeCCccCccccCcccCCCceEEEEeCCCCceeceeeecCCCCC
Q 039692 97 VAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNGG 176 (417)
Q Consensus 97 ~ald~~tG~~~W~~~~~~~~~~~~~~sp~v~~~~v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~~~W~~~~~~~~~~ 176 (417)
+.+|++|++++=+++.+.+. ...+ -.++++|+... ++.|+-+|++|.+++=+.+.......
T Consensus 88 ~v~D~~tl~~~~ti~~~~~G---wglt--~dg~~L~vSdg--------------s~~l~~iDp~t~~~~~~I~V~~~g~~ 148 (243)
T 3mbr_X 88 FVYDLATLTPRARFRYPGEG---WALT--SDDSHLYMSDG--------------TAVIRKLDPDTLQQVGSIKVTAGGRP 148 (243)
T ss_dssp EEEETTTTEEEEEEECSSCC---CEEE--ECSSCEEEECS--------------SSEEEEECTTTCCEEEEEECEETTEE
T ss_pred EEEECCcCcEEEEEeCCCCc---eEEe--eCCCEEEEECC--------------CCeEEEEeCCCCeEEEEEEEccCCcc
Confidence 99999999999999976432 1111 23567888654 47899999999999877666321110
Q ss_pred CCCCCCCccccCCCceeecccCcccCCCCCCCCCCCCcccCCC-CCCeEEEEECCCCceEEEecCCC
Q 039692 177 KRGGYSGAAVWGSSPAIDVIRRQKQNNQTTKPTHPDQCISSDI-YANSIVALDIDSGRIAWAKPLGG 242 (417)
Q Consensus 177 ~~~~~~gg~~~~~~pa~d~~~~~~~~~~~~~p~~~~~~v~~~~-~~~~l~ald~~tG~~~W~~~~~~ 242 (417)
+ ....-++. .++.+|++. ..+.|..||++||+++=..+...
T Consensus 149 ---------~-~~lNeLe~---------------~~G~lyanvw~s~~I~vIDp~tG~V~~~idl~~ 190 (243)
T 3mbr_X 149 ---------L-DNLNELEW---------------VNGELLANVWLTSRIARIDPASGKVVAWIDLQA 190 (243)
T ss_dssp ---------C-CCEEEEEE---------------ETTEEEEEETTTTEEEEECTTTCBEEEEEECGG
T ss_pred ---------c-ccceeeEE---------------eCCEEEEEECCCCeEEEEECCCCCEEEEEECCc
Confidence 0 00000110 123355554 35789999999999987777653
No 54
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=97.95 E-value=0.0033 Score=58.28 Aligned_cols=216 Identities=13% Similarity=0.067 Sum_probs=115.5
Q ss_pred EEEEeccCCcEEEEECCCCccceEeecc---c---cc---CCccee--eEEeeeeeEEEEEecCCCceeeeeecCCCC--
Q 039692 50 VVYFPSWNGYLYAVNAFNGALIWEQNLS---K---LT---GLSGTG--IVVNVTVAVVVAVSRSNGELVWSTQIDPRP-- 116 (417)
Q Consensus 50 ~v~v~~~~g~l~ald~~tG~~~W~~~~~---~---~~---~~~p~~--~v~~~~v~~l~ald~~tG~~~W~~~~~~~~-- 116 (417)
.++.++ ++.+..+|.++++..-..... . .+ ..+|.+ ++.....+.++.+|..+++......+....
T Consensus 65 ~l~~~~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~ 143 (337)
T 1gxr_A 65 HVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPA 143 (337)
T ss_dssp EEEEEC-BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC--EEEEEEECSSSC
T ss_pred EEEEcC-CCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEcCCCcEEEEECCCCCcceeeecccCCCc
Confidence 455555 899999999887643322211 1 10 011110 111112388999999888743333322111
Q ss_pred CcceeeceeEEcCeEEEEeCCccCccccCcccCCCceEEEEeCCCCceeceeeecCCCCCCCCCCCCccccCCCceeecc
Q 039692 117 RSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYSGAAVWGSSPAIDVI 196 (417)
Q Consensus 117 ~~~~~~sp~v~~~~v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~~gg~~~~~~pa~d~~ 196 (417)
...+..+| .+..++++.. ++.|..+|.++++.+.++...... +. ..++.++
T Consensus 144 i~~~~~~~--~~~~l~~~~~--------------dg~v~~~d~~~~~~~~~~~~~~~~-----------i~--~~~~~~~ 194 (337)
T 1gxr_A 144 CYALAISP--DSKVCFSCCS--------------DGNIAVWDLHNQTLVRQFQGHTDG-----------AS--CIDISND 194 (337)
T ss_dssp EEEEEECT--TSSEEEEEET--------------TSCEEEEETTTTEEEEEECCCSSC-----------EE--EEEECTT
T ss_pred eEEEEECC--CCCEEEEEeC--------------CCcEEEEeCCCCceeeeeecccCc-----------eE--EEEECCC
Confidence 11122222 1334566554 589999999999888776542110 00 1122221
Q ss_pred cCcccCCCCCCCCCCCCcccCCCCCCeEEEEECCCCceEEEecCCCCcceeeeccCCCCCCCCCCCCCCCccCCCceEEE
Q 039692 197 RRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLT 276 (417)
Q Consensus 197 ~~~~~~~~~~~p~~~~~~v~~~~~~~~l~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~p~v~~ 276 (417)
...+..+..++.+..+|.++++.+........ ..-..
T Consensus 195 ---------------~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~----------------------------v~~~~ 231 (337)
T 1gxr_A 195 ---------------GTKLWTGGLDNTVRSWDLREGRQLQQHDFTSQ----------------------------IFSLG 231 (337)
T ss_dssp ---------------SSEEEEEETTSEEEEEETTTTEEEEEEECSSC----------------------------EEEEE
T ss_pred ---------------CCEEEEEecCCcEEEEECCCCceEeeecCCCc----------------------------eEEEE
Confidence 12344556678999999999998887754321 11111
Q ss_pred EecCCeeeeEEEEEcccceEEEEECCCCcEEEEeecCCCCCCCcceecc--cccCCeEEEEeccCCceeeeec
Q 039692 277 ISTNGRFRDVVVAVQKSGFAWAFDRDSGDIIWFKLAGPGGREGGGVWGA--ATDGRRVYTNIVNNDRIIWSTA 347 (417)
Q Consensus 277 ~~~~G~~~~~v~~~~~~G~l~ald~~tG~~lW~~~~~~~~~~g~~~~~~--~~~~~~vy~~~~~~~~~~W~~~ 347 (417)
...+ ++.+++++.+|.++.+|..+++........ .....+ ..++..++....++.-.+|..+
T Consensus 232 ~s~~---~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~------~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~ 295 (337)
T 1gxr_A 232 YCPT---GEWLAVGMESSNVEVLHVNKPDKYQLHLHE------SCVLSLKFAYCGKWFVSTGKDNLLNAWRTP 295 (337)
T ss_dssp ECTT---SSEEEEEETTSCEEEEETTSSCEEEECCCS------SCEEEEEECTTSSEEEEEETTSEEEEEETT
T ss_pred ECCC---CCEEEEEcCCCcEEEEECCCCCeEEEcCCc------cceeEEEECCCCCEEEEecCCCcEEEEECC
Confidence 2223 357788888999999999998865332211 111122 2244555555544445667654
No 55
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=97.93 E-value=0.00021 Score=65.56 Aligned_cols=154 Identities=16% Similarity=0.076 Sum_probs=100.5
Q ss_pred eeCcEEECCEEEEeccC---CcEEEEECCCCccceEeecccccCCcceeeEEee---ee-----eEEEEEecCCCceeee
Q 039692 41 SATPAVANGVVYFPSWN---GYLYAVNAFNGALIWEQNLSKLTGLSGTGIVVNV---TV-----AVVVAVSRSNGELVWS 109 (417)
Q Consensus 41 ~~~p~~~~g~v~v~~~~---g~l~ald~~tG~~~W~~~~~~~~~~~p~~~v~~~---~v-----~~l~ald~~tG~~~W~ 109 (417)
.....+.++.+|+++.. +.|..+|++||+++=+..++.... +.++...+ ++ +.++.+|++|++++=+
T Consensus 45 tqGL~~~~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~~F--geGit~~g~~ly~ltw~~~~v~v~D~~t~~~~~t 122 (262)
T 3nol_A 45 TEGFFYRNGYFYESTGLNGRSSIRKVDIESGKTLQQIELGKRYF--GEGISDWKDKIVGLTWKNGLGFVWNIRNLRQVRS 122 (262)
T ss_dssp EEEEEEETTEEEEEEEETTEEEEEEECTTTCCEEEEEECCTTCC--EEEEEEETTEEEEEESSSSEEEEEETTTCCEEEE
T ss_pred cceEEEECCEEEEECCCCCCceEEEEECCCCcEEEEEecCCccc--eeEEEEeCCEEEEEEeeCCEEEEEECccCcEEEE
Confidence 34445678999999853 389999999999999988875432 12222222 22 8999999999999999
Q ss_pred eecCCCCCcceeeceeEEcCeEEEEeCCccCccccCcccCCCceEEEEeCCCCceeceeeecCCCCCCCCCCCCccccCC
Q 039692 110 TQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYSGAAVWGS 189 (417)
Q Consensus 110 ~~~~~~~~~~~~~sp~v~~~~v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~~gg~~~~~ 189 (417)
++...+.. ..+ -.++.+|+... ...|+-+|++|.+++=+.+....... + .
T Consensus 123 i~~~~eG~---glt--~dg~~L~~SdG--------------s~~i~~iDp~T~~v~~~I~V~~~g~~---------~--~ 172 (262)
T 3nol_A 123 FNYDGEGW---GLT--HNDQYLIMSDG--------------TPVLRFLDPESLTPVRTITVTAHGEE---------L--P 172 (262)
T ss_dssp EECSSCCC---CEE--ECSSCEEECCS--------------SSEEEEECTTTCSEEEEEECEETTEE---------C--C
T ss_pred EECCCCce---EEe--cCCCEEEEECC--------------CCeEEEEcCCCCeEEEEEEeccCCcc---------c--c
Confidence 98754321 111 23566777653 37899999999999877666321100 0 0
Q ss_pred Cc-eeecccCcccCCCCCCCCCCCCcccCCC-CCCeEEEEECCCCceEEEecCC
Q 039692 190 SP-AIDVIRRQKQNNQTTKPTHPDQCISSDI-YANSIVALDIDSGRIAWAKPLG 241 (417)
Q Consensus 190 ~p-a~d~~~~~~~~~~~~~p~~~~~~v~~~~-~~~~l~ald~~tG~~~W~~~~~ 241 (417)
.+ -++. .++.++++. ..+.|+.||++||+++=..+..
T Consensus 173 ~lNELe~---------------~~G~lyan~w~~~~I~vIDp~tG~V~~~Id~~ 211 (262)
T 3nol_A 173 ELNELEW---------------VDGEIFANVWQTNKIVRIDPETGKVTGIIDLN 211 (262)
T ss_dssp CEEEEEE---------------ETTEEEEEETTSSEEEEECTTTCBEEEEEECT
T ss_pred ccceeEE---------------ECCEEEEEEccCCeEEEEECCCCcEEEEEECC
Confidence 00 0000 123344444 3578999999999998777765
No 56
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=97.87 E-value=0.00092 Score=63.94 Aligned_cols=226 Identities=9% Similarity=0.012 Sum_probs=124.9
Q ss_pred CCEEEEeccCCcEEEEECCCCccceEeeccc-----cc---CCccee--eEEeeeeeEEEEEecCCCceeeeeecCCCCC
Q 039692 48 NGVVYFPSWNGYLYAVNAFNGALIWEQNLSK-----LT---GLSGTG--IVVNVTVAVVVAVSRSNGELVWSTQIDPRPR 117 (417)
Q Consensus 48 ~g~v~v~~~~g~l~ald~~tG~~~W~~~~~~-----~~---~~~p~~--~v~~~~v~~l~ald~~tG~~~W~~~~~~~~~ 117 (417)
++.++.++.+|.|...|.++|+.+....... .+ ..+|.+ ++.....+.+...|.++|+.+-.+.......
T Consensus 93 d~~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~~~~~~h~~~V 172 (344)
T 4gqb_B 93 ERGILVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVVLSSYRAHAAQV 172 (344)
T ss_dssp TTEEEEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCE
T ss_pred CCeEEEEECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCcCCce
Confidence 6788888999999999999999876655321 11 111211 1112233889999999999887765321111
Q ss_pred cceeeceeEEcCeEEEEeCCccCccccCcccCCCceEEEEeCCCCceeceeeecCCCCCCCCCCCCccccCCCceeeccc
Q 039692 118 SQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYSGAAVWGSSPAIDVIR 197 (417)
Q Consensus 118 ~~~~~sp~v~~~~v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~~gg~~~~~~pa~d~~~ 197 (417)
..+..+| .+..+++..+. ++.|...|.++++.+-++....... .+ ...++.+..
T Consensus 173 ~~~~~~~--~~~~~l~s~s~-------------D~~v~iwd~~~~~~~~~~~~~~~~~---------~~--~~~~~~p~~ 226 (344)
T 4gqb_B 173 TCVAASP--HKDSVFLSCSE-------------DNRILLWDTRCPKPASQIGCSAPGY---------LP--TSLAWHPQQ 226 (344)
T ss_dssp EEEEECS--SCTTEEEEEET-------------TSCEEEEETTSSSCEEECC----CC---------CE--EEEEECSSC
T ss_pred EEEEecC--CCCCceeeecc-------------ccccccccccccceeeeeecceeec---------cc--eeeeecCCC
Confidence 1111122 13345543332 6899999999998876654321110 00 011221111
Q ss_pred CcccCCCCCCCCCCCCcccCCCCCCeEEEEECCCCceEEEecCCCCcceeeeccCCCCCCCCCCCCCCCccCCCceEEEE
Q 039692 198 RQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTI 277 (417)
Q Consensus 198 ~~~~~~~~~~p~~~~~~v~~~~~~~~l~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~p~v~~~ 277 (417)
...+..+..++.|..+|.++|+.+..+........ -...
T Consensus 227 --------------~~~l~sg~~dg~v~~wd~~~~~~~~~~~~h~~~v~---------------------------~v~f 265 (344)
T 4gqb_B 227 --------------SEVFVFGDENGTVSLVDTKSTSCVLSSAVHSQCVT---------------------------GLVF 265 (344)
T ss_dssp --------------TTEEEEEETTSEEEEEESCC--CCEEEECCSSCEE---------------------------EEEE
T ss_pred --------------CcceEEeccCCcEEEEECCCCcEEEEEcCCCCCEE---------------------------EEEE
Confidence 11233456678899999999998877664322111 0112
Q ss_pred ecCCeeeeEEEEEcccceEEEEECCCCcEEEEeecCCCCCCCcceecccc--cCCeEEEEec-cCCceeeeecC
Q 039692 278 STNGRFRDVVVAVQKSGFAWAFDRDSGDIIWFKLAGPGGREGGGVWGAAT--DGRRVYTNIV-NNDRIIWSTAD 348 (417)
Q Consensus 278 ~~~G~~~~~v~~~~~~G~l~ald~~tG~~lW~~~~~~~~~~g~~~~~~~~--~~~~vy~~~~-~~~~~~W~~~~ 348 (417)
..+| ..+|+.++.|+.++..|..+|+++- .. ++ . .....++. ++..+++... +..-.+|..+.
T Consensus 266 sp~g--~~~lasgs~D~~i~vwd~~~~~~~~-~~-~H---~-~~V~~v~~sp~~~~llas~s~D~~v~~w~v~~ 331 (344)
T 4gqb_B 266 SPHS--VPFLASLSEDCSLAVLDSSLSELFR-SQ-AH---R-DFVRDATWSPLNHSLLTTVGWDHQVVHHVVPT 331 (344)
T ss_dssp CSSS--SCCEEEEETTSCEEEECTTCCEEEE-EC-CC---S-SCEEEEEECSSSTTEEEEEETTSCEEEEECCC
T ss_pred ccCC--CeEEEEEeCCCeEEEEECCCCcEEE-Ec-CC---C-CCEEEEEEeCCCCeEEEEEcCCCeEEEEECCC
Confidence 2233 3467778899999999999998653 21 11 1 12223333 5556665544 44467788764
No 57
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=97.87 E-value=0.0052 Score=59.31 Aligned_cols=242 Identities=12% Similarity=0.013 Sum_probs=129.8
Q ss_pred CCEEEEeccCCcEEEEECCCCccceEeeccc-cc---CCccee--eEEeeeeeEEEEEecCCCceeeeeecCCCCCccee
Q 039692 48 NGVVYFPSWNGYLYAVNAFNGALIWEQNLSK-LT---GLSGTG--IVVNVTVAVVVAVSRSNGELVWSTQIDPRPRSQIT 121 (417)
Q Consensus 48 ~g~v~v~~~~g~l~ald~~tG~~~W~~~~~~-~~---~~~p~~--~v~~~~v~~l~ald~~tG~~~W~~~~~~~~~~~~~ 121 (417)
+..++.++.++.|..+|.++++.+..+.... .+ ..+|.+ ++.....+.++.+|..+++.+.+..........+.
T Consensus 109 ~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~ 188 (420)
T 3vl1_A 109 MRRFILGTTEGDIKVLDSNFNLQREIDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLIGHRATVTDIA 188 (420)
T ss_dssp SCEEEEEETTSCEEEECTTSCEEEEETTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEEECCSSCEEEEE
T ss_pred CCEEEEEECCCCEEEEeCCCcceeeecccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEEcCCCCcEEEEE
Confidence 3467777889999999999888765543221 11 111211 11122238899999999988877663222111122
Q ss_pred eceeEEcCeEEEEeCCccCccccCcccCCCceEEEEeCCCCceeceeeecCCCCCCCCCCCCccccCCCceeecccCc--
Q 039692 122 MSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYSGAAVWGSSPAIDVIRRQ-- 199 (417)
Q Consensus 122 ~sp~v~~~~v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~~gg~~~~~~pa~d~~~~~-- 199 (417)
.+| .+..++.+.. ++.|..+|.++++.+..+........ .+. ..++.+....
T Consensus 189 ~~~--~~~~l~s~~~--------------d~~v~iwd~~~~~~~~~~~~~~~~~~--------~v~--~~~~~~~~~~~~ 242 (420)
T 3vl1_A 189 IID--RGRNVLSASL--------------DGTIRLWECGTGTTIHTFNRKENPHD--------GVN--SIALFVGTDRQL 242 (420)
T ss_dssp EET--TTTEEEEEET--------------TSCEEEEETTTTEEEEEECBTTBTTC--------CEE--EEEEEECCCSSC
T ss_pred EcC--CCCEEEEEcC--------------CCcEEEeECCCCceeEEeecCCCCCC--------Ccc--EEEEecCCccee
Confidence 222 1334555554 68999999999999988775321110 000 0011110000
Q ss_pred ------ccCCCCCCCCCCCCcccCCCCCCeEEEEECCCCceEEEecCCCCcceeeeccCCCCCCCCCCCCCCCccCCCce
Q 039692 200 ------KQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPM 273 (417)
Q Consensus 200 ------~~~~~~~~p~~~~~~v~~~~~~~~l~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~p~ 273 (417)
........| ....+..+..++.+..+|.++++.+.+....... ...
T Consensus 243 ~~~~~~~v~~~~~s~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~--------------------------~v~ 294 (420)
T 3vl1_A 243 HEISTSKKNNLEFGT--YGKYVIAGHVSGVITVHNVFSKEQTIQLPSKFTC--------------------------SCN 294 (420)
T ss_dssp GGGCCCCCCTTCSSC--TTEEEEEEETTSCEEEEETTTCCEEEEECCTTSS--------------------------CEE
T ss_pred eecccCcccceEEcC--CCCEEEEEcCCCeEEEEECCCCceeEEcccccCC--------------------------Cce
Confidence 000011111 1224455667788999999999888777543221 011
Q ss_pred EEEEecCCeeeeEEEEEcccceEEEEECCCCcE-EEEeecCCCCCCCcceecccccCCeEEEEe-ccCCceeeeecCC
Q 039692 274 LLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDI-IWFKLAGPGGREGGGVWGAATDGRRVYTNI-VNNDRIIWSTADP 349 (417)
Q Consensus 274 v~~~~~~G~~~~~v~~~~~~G~l~ald~~tG~~-lW~~~~~~~~~~g~~~~~~~~~~~~vy~~~-~~~~~~~W~~~~~ 349 (417)
-.....+| ...++.++.+|.++..|..+++. +-...... +.........++.+++.. .++.-.+|....+
T Consensus 295 ~~~~~~~~--~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~----~~~v~~~~~~~~~~l~s~~~d~~v~iw~~~~~ 366 (420)
T 3vl1_A 295 SLTVDGNN--ANYIYAGYENGMLAQWDLRSPECPVGEFLINE----GTPINNVYFAAGALFVSSGFDTSIKLDIISDP 366 (420)
T ss_dssp EEEECSSC--TTEEEEEETTSEEEEEETTCTTSCSEEEEEST----TSCEEEEEEETTEEEEEETTTEEEEEEEECCT
T ss_pred eEEEeCCC--CCEEEEEeCCCeEEEEEcCCCcCchhhhhccC----CCCceEEEeCCCCEEEEecCCccEEEEeccCC
Confidence 11112222 23788899999999999999854 44443211 112222233344444444 4444678987754
No 58
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=97.86 E-value=0.001 Score=64.06 Aligned_cols=183 Identities=11% Similarity=0.008 Sum_probs=112.4
Q ss_pred CCEEEEeccCCcEEEEECCCCccceEeecccccC--------------CcceeeEEee------eeeEEEEEecCCCcee
Q 039692 48 NGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG--------------LSGTGIVVNV------TVAVVVAVSRSNGELV 107 (417)
Q Consensus 48 ~g~v~v~~~~g~l~ald~~tG~~~W~~~~~~~~~--------------~~p~~~v~~~------~v~~l~ald~~tG~~~ 107 (417)
+..++.++.++.|+.+|.++++.+.++....... ...+....++ ..+.|+.+|..+++.+
T Consensus 161 ~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~~ 240 (425)
T 1r5m_A 161 GTHIISMDVENVTILWNVISGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKTPT 240 (425)
T ss_dssp SSEEEEEETTCCEEEEETTTTEEEEEECCC---------------CCCBSCCEEEETTEEEEECGGGCEEEEETTCSSCS
T ss_pred CCEEEEEecCCeEEEEECCCCcEEEEeeccccCccceeeccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCCcee
Confidence 3467788889999999999999988877654210 0000001111 2289999999999888
Q ss_pred eeeecCCCCCcceeeceeEEcCeEEEEeCCccCccccCcccCCCceEEEEeCCCCceeceeeecCCCCCCCCCCCCcccc
Q 039692 108 WSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYSGAAVW 187 (417)
Q Consensus 108 W~~~~~~~~~~~~~~sp~v~~~~v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~~gg~~~ 187 (417)
............+..+| .+..++++.. ++.|..+|.++++.+..+..... .+.
T Consensus 241 ~~~~~~~~~i~~~~~~~--~~~~l~~~~~--------------d~~i~i~d~~~~~~~~~~~~~~~-----------~i~ 293 (425)
T 1r5m_A 241 GKLIGHHGPISVLEFND--TNKLLLSASD--------------DGTLRIWHGGNGNSQNCFYGHSQ-----------SIV 293 (425)
T ss_dssp EEECCCSSCEEEEEEET--TTTEEEEEET--------------TSCEEEECSSSBSCSEEECCCSS-----------CEE
T ss_pred eeeccCCCceEEEEECC--CCCEEEEEcC--------------CCEEEEEECCCCccceEecCCCc-----------cEE
Confidence 77763322111122222 1334555554 58999999999988777643111 010
Q ss_pred CCCceeecccCcccCCCCCCCCCCCCcccCCCCCCeEEEEECCCCceEEEecCCCCcceeeeccCCCCCCCCCCCCCCCc
Q 039692 188 GSSPAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDAD 267 (417)
Q Consensus 188 ~~~pa~d~~~~~~~~~~~~~p~~~~~~v~~~~~~~~l~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~ 267 (417)
..++.+. +.++.+..++.+..+|.++++.+..+.......
T Consensus 294 --~~~~~~~----------------~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i---------------------- 333 (425)
T 1r5m_A 294 --SASWVGD----------------DKVISCSMDGSVRLWSLKQNTLLALSIVDGVPI---------------------- 333 (425)
T ss_dssp --EEEEETT----------------TEEEEEETTSEEEEEETTTTEEEEEEECTTCCE----------------------
T ss_pred --EEEECCC----------------CEEEEEeCCCcEEEEECCCCcEeEecccCCccE----------------------
Confidence 1222221 134455678899999999999988776533211
Q ss_pred cCCCceEEEEecCCeeeeEEEEEcccceEEEEECCCCc
Q 039692 268 FGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGD 305 (417)
Q Consensus 268 ~~~~p~v~~~~~~G~~~~~v~~~~~~G~l~ald~~tG~ 305 (417)
.-.....+ ++.|++++.+|.++.+|..+++
T Consensus 334 -----~~~~~s~~---~~~l~~~~~dg~i~i~~~~~~~ 363 (425)
T 1r5m_A 334 -----FAGRISQD---GQKYAVAFMDGQVNVYDLKKLN 363 (425)
T ss_dssp -----EEEEECTT---SSEEEEEETTSCEEEEECHHHH
T ss_pred -----EEEEEcCC---CCEEEEEECCCeEEEEECCCCc
Confidence 11112223 3578888889999999999887
No 59
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=97.85 E-value=0.0044 Score=58.18 Aligned_cols=228 Identities=10% Similarity=-0.010 Sum_probs=123.5
Q ss_pred CCEEEEeccCCcEEEEECCCCccceEeecccc-c---CCccee--eEEeeeeeEEEEEecCCCceeeeeecCCCCCccee
Q 039692 48 NGVVYFPSWNGYLYAVNAFNGALIWEQNLSKL-T---GLSGTG--IVVNVTVAVVVAVSRSNGELVWSTQIDPRPRSQIT 121 (417)
Q Consensus 48 ~g~v~v~~~~g~l~ald~~tG~~~W~~~~~~~-~---~~~p~~--~v~~~~v~~l~ald~~tG~~~W~~~~~~~~~~~~~ 121 (417)
+..++.++.++.|..+|..+|+.+..+..... + ..+|.+ ++..+..+.++.+|..+++.+......... ..+.
T Consensus 44 ~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v-~~~~ 122 (369)
T 3zwl_B 44 GDLLFSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDVDCFTKYCVTGSADYSIKLWDVSNGQCVATWKSPVPV-KRVE 122 (369)
T ss_dssp SCEEEEEESSSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECSSCE-EEEE
T ss_pred CCEEEEEeCCCEEEEEeCCCchhhhhhhhcCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEeecCCCe-EEEE
Confidence 34677778899999999999999887764321 1 111111 111122389999999999999888843221 1122
Q ss_pred eceeEEcCe-EEEEeCCccCccccCcccCCCceEEEEeCCCCceeceeeecCCCCCC-CCCCCCc-cccCCCceeecccC
Q 039692 122 MSGSVYMGA-FYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNGGK-RGGYSGA-AVWGSSPAIDVIRR 198 (417)
Q Consensus 122 ~sp~v~~~~-v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~~~W~~~~~~~~~~~-~~~~~gg-~~~~~~pa~d~~~~ 198 (417)
.+| ++. ++++... ....++.|..+|..+++.............. .....+. .+ ...++.++
T Consensus 123 ~~~---~~~~l~~~~~~---------~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-- 186 (369)
T 3zwl_B 123 FSP---CGNYFLAILDN---------VMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAA--TVAGWSTK-- 186 (369)
T ss_dssp ECT---TSSEEEEEECC---------BTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCE--EEEEECGG--
T ss_pred Ecc---CCCEEEEecCC---------ccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccce--eEEEEcCC--
Confidence 233 343 4444331 0011378888888777665544432111000 0000000 00 01112111
Q ss_pred cccCCCCCCCCCCCCcccCCCCCCeEEEEECCC-CceEEEecCCCCcceeeeccCCCCCCCCCCCCCCCccCCCceEEEE
Q 039692 199 QKQNNQTTKPTHPDQCISSDIYANSIVALDIDS-GRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTI 277 (417)
Q Consensus 199 ~~~~~~~~~p~~~~~~v~~~~~~~~l~ald~~t-G~~~W~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~p~v~~~ 277 (417)
...++.+..++.+..+|.++ ++.+..+....... .-...
T Consensus 187 -------------~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v---------------------------~~~~~ 226 (369)
T 3zwl_B 187 -------------GKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSI---------------------------SDMQF 226 (369)
T ss_dssp -------------GCEEEEEETTSEEEEEETTTTTEEEEEEECCSSCE---------------------------EEEEE
T ss_pred -------------CCEEEEEcCCCEEEEEECCCCcEeEEEEecCCCce---------------------------eEEEE
Confidence 12344556678899999988 67666665432211 11112
Q ss_pred ecCCeeeeEEEEEcccceEEEEECCCCcEEEEeecCCCCCCCcceecccccCCeEEEEeccC
Q 039692 278 STNGRFRDVVVAVQKSGFAWAFDRDSGDIIWFKLAGPGGREGGGVWGAATDGRRVYTNIVNN 339 (417)
Q Consensus 278 ~~~G~~~~~v~~~~~~G~l~ald~~tG~~lW~~~~~~~~~~g~~~~~~~~~~~~vy~~~~~~ 339 (417)
..+ +..++.++.+|.++.+|..+++.+........ -.......++..+++...++
T Consensus 227 ~~~---~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~----~~~~~~~~~~~~l~~~~~~~ 281 (369)
T 3zwl_B 227 SPD---LTYFITSSRDTNSFLVDVSTLQVLKKYETDCP----LNTAVITPLKEFIILGGGQE 281 (369)
T ss_dssp CTT---SSEEEEEETTSEEEEEETTTCCEEEEEECSSC----EEEEEECSSSSEEEEEECCC
T ss_pred CCC---CCEEEEecCCceEEEEECCCCceeeeecCCCC----ceeEEecCCCceEEEeecCC
Confidence 223 35778888999999999999999988874210 11112233455565555544
No 60
>2zux_A YESW protein; beta-propeller, lyase, rhamnose complex; HET: RAM; 1.32A {Bacillus subtilis} PDB: 2z8s_A* 2z8r_A*
Probab=97.84 E-value=0.0021 Score=64.69 Aligned_cols=217 Identities=16% Similarity=0.248 Sum_probs=112.5
Q ss_pred EEEEEecCCCceeeeeecCCCCC-cceeeceeEE----cC--eEEEEeCCccC----cc---c----cC---cccCCCce
Q 039692 95 VVVAVSRSNGELVWSTQIDPRPR-SQITMSGSVY----MG--AFYVGLSSLEE----AL---P----AD---QCCTFRGS 153 (417)
Q Consensus 95 ~l~ald~~tG~~~W~~~~~~~~~-~~~~~sp~v~----~~--~v~v~~~~~~~----~~---~----~~---~~~~~~g~ 153 (417)
.|.|++++ |+.+|++.++.... +....++.++ ++ -|++.+..+.- .+ + +. -..+-...
T Consensus 152 ~l~aY~ld-G~~LW~idlg~ni~aGa~yt~~~V~DlDGDGkaEIvv~TadGt~dg~g~~ig~~~~dyrn~~g~il~GpEy 230 (591)
T 2zux_A 152 LIDAYKLD-GTKLWRINLGKNIRAGAHYTQFMVYDLDGDGKAEVAMKTADGTKDGTGKVIGNANADYRNEQGRVLSGPEY 230 (591)
T ss_dssp EEEEECTT-SCEEEEEECCTTSCCSTTSCCCEEECSSSSSSCEEEEEECTTCBCTTSCBCSSTTCCCBCTTSCBCSSCCE
T ss_pred EEEEEECC-CCEEEEEcCCCCcccccccCceeEEEcCCCCcceEEEEccCCcccCCceEecccccccccccceeecCCcE
Confidence 68899974 99999998754321 1123455553 22 27776543210 00 0 00 01122347
Q ss_pred EEEEeCCCCceeceeeecCCCCCCCCCCCCccccCCCce--eecccCcccCCCCC-CCCCCCCcccCC-C-CCCeEEEEE
Q 039692 154 LAKLDVRNGRIIWQTYMLPDNGGKRGGYSGAAVWGSSPA--IDVIRRQKQNNQTT-KPTHPDQCISSD-I-YANSIVALD 228 (417)
Q Consensus 154 l~ald~~tG~~~W~~~~~~~~~~~~~~~~gg~~~~~~pa--~d~~~~~~~~~~~~-~p~~~~~~v~~~-~-~~~~l~ald 228 (417)
|..||-+||+++++.+..|.... -..|+-.+. +|... ........ .|. .+... - ....|.|+|
T Consensus 231 L~vfdG~TG~~l~~~~~~p~rg~-------~~~WGD~ygnR~drf~-~~vayLDG~~Ps----~v~~rGyYtr~~v~A~d 298 (591)
T 2zux_A 231 LTVFQGSTGKELVTANFEPARGN-------VSDWGDSYGNRVDRFL-AGIAYLDGQRPS----LIMTRGYYAKTMLVAYN 298 (591)
T ss_dssp EEEEETTTCCEEEEEECSSCCCC-------GGGGTCSSSSGGGCEE-EEEECTTSSSCE----EEEEECCSSSCEEEEEE
T ss_pred EEEEeCCCCCEEecccCCCCCCc-------ccccccccccccccce-eeEEECCCCCce----EEEeccccceeEEEEEE
Confidence 99999999999999887553221 112321100 00000 00000000 110 01111 1 124699999
Q ss_pred CCCCc--eEEEecCCCCcceeeeccCCCCCCCCCCCCCCCccCCCceEEEEecCCeeeeEEEEEcccceEEEEECCCCcE
Q 039692 229 IDSGR--IAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDI 306 (417)
Q Consensus 229 ~~tG~--~~W~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~p~v~~~~~~G~~~~~v~~~~~~G~l~ald~~tG~~ 306 (417)
.++|+ ++|++.......-.+.+ .....+.+.|+.-||+ .++|| ++. ++| .+|+.
T Consensus 299 ~~~~~L~~~W~~d~~~~~~~~~~g----------------qg~h~~~vaDVDgDG~-dEIv~-Gs~-----~iD-~dG~~ 354 (591)
T 2zux_A 299 FRDGKLSKLWTLDSSKSGNEAFAG----------------QGNHNLSIADVDGDGK-DEIIF-GSM-----AVD-HDGKG 354 (591)
T ss_dssp EETTEEEEEEEEETTSTTCGGGSS----------------CCCSCCEEECCSSSSS-CEEEE-TTE-----EEC-TTSCE
T ss_pred CCCCceEEEEEecCCCCCcccccc----------------cCCCCCeeEeCCCCCC-ceEEE-eee-----EEC-CCCCE
Confidence 99887 59999876431000100 0125788999888886 44444 332 567 78999
Q ss_pred EEEeecCCC----------CCCCcceeccccc---CCeEEEEeccCCceeeeecC
Q 039692 307 IWFKLAGPG----------GREGGGVWGAATD---GRRVYTNIVNNDRIIWSTAD 348 (417)
Q Consensus 307 lW~~~~~~~----------~~~g~~~~~~~~~---~~~vy~~~~~~~~~~W~~~~ 348 (417)
||+...+++ ...|-..+.+--. .....+.+..+++++|+...
T Consensus 355 L~st~~gHGDa~hv~dldP~r~GlEv~~~~E~~~~~~G~~~~dA~tG~vlw~~~~ 409 (591)
T 2zux_A 355 MYSTGLGHGDALHTGDLDPGRPGLEVFQVHEDKNAKYGLSFRDAATGKILWGVYA 409 (591)
T ss_dssp EEECSCCCCSCEEEECCCTTSSSCEEEEECCCTTSSCSEEEEETTTCCEEEEECC
T ss_pred eeeCCCCCCCeeEEeecCCCCCCcEEEEEecCCCCCCccEEEECCCCcEEEEcCC
Confidence 999987532 1112222221111 11344467788899999864
No 61
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=97.83 E-value=0.005 Score=57.10 Aligned_cols=193 Identities=12% Similarity=0.074 Sum_probs=114.9
Q ss_pred CCEEEEeccCCcEEEEECCCCccceEeecccc-c---CCccee--eEEeeeeeEEEEEecCCCceeeeeecCCCCCccee
Q 039692 48 NGVVYFPSWNGYLYAVNAFNGALIWEQNLSKL-T---GLSGTG--IVVNVTVAVVVAVSRSNGELVWSTQIDPRPRSQIT 121 (417)
Q Consensus 48 ~g~v~v~~~~g~l~ald~~tG~~~W~~~~~~~-~---~~~p~~--~v~~~~v~~l~ald~~tG~~~W~~~~~~~~~~~~~ 121 (417)
+..++.++.++.|..+|.++++.+-.+..... + ..+|.+ ++..+..+.++.+|.++++.+............+.
T Consensus 77 ~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~ 156 (312)
T 4ery_A 77 SNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVH 156 (312)
T ss_dssp SSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEE
T ss_pred CCEEEEECCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEecCCCCcEEEEE
Confidence 34677778899999999999988766654321 1 011111 12222338899999999998877664322211122
Q ss_pred eceeEEcC-eEEEEeCCccCccccCcccCCCceEEEEeCCCCceeceeeecCCCCCCCCCCCCccccCCCceeecccCcc
Q 039692 122 MSGSVYMG-AFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYSGAAVWGSSPAIDVIRRQK 200 (417)
Q Consensus 122 ~sp~v~~~-~v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~~gg~~~~~~pa~d~~~~~~ 200 (417)
.+| ++ .++.+.. ++.|..+|.++++.+-+....... .+ ...++++.
T Consensus 157 ~~~---~~~~l~~~~~--------------d~~i~~wd~~~~~~~~~~~~~~~~----------~~--~~~~~~~~---- 203 (312)
T 4ery_A 157 FNR---DGSLIVSSSY--------------DGLCRIWDTASGQCLKTLIDDDNP----------PV--SFVKFSPN---- 203 (312)
T ss_dssp ECT---TSSEEEEEET--------------TSCEEEEETTTCCEEEEECCSSCC----------CE--EEEEECTT----
T ss_pred EcC---CCCEEEEEeC--------------CCcEEEEECCCCceeeEEeccCCC----------ce--EEEEECCC----
Confidence 222 34 3555544 689999999999877554321100 00 01122221
Q ss_pred cCCCCCCCCCCCCcccCCCCCCeEEEEECCCCceEEEecCCCCcceeeeccCCCCCCCCCCCCCCCccCCCceEEEEecC
Q 039692 201 QNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTISTN 280 (417)
Q Consensus 201 ~~~~~~~p~~~~~~v~~~~~~~~l~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~p~v~~~~~~ 280 (417)
...+..+..++.+..+|.++++.+..+.......+ .+.......
T Consensus 204 -----------~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-------------------------~~~~~~~~~ 247 (312)
T 4ery_A 204 -----------GKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKY-------------------------CIFANFSVT 247 (312)
T ss_dssp -----------SSEEEEEETTTEEEEEETTTTEEEEEECSSCCSSS-------------------------CCCEEEECS
T ss_pred -----------CCEEEEEcCCCeEEEEECCCCcEEEEEEecCCceE-------------------------EEEEEEEeC
Confidence 12344556778999999999998877664332110 011111111
Q ss_pred CeeeeEEEEEcccceEEEEECCCCcEEEEee
Q 039692 281 GRFRDVVVAVQKSGFAWAFDRDSGDIIWFKL 311 (417)
Q Consensus 281 G~~~~~v~~~~~~G~l~ald~~tG~~lW~~~ 311 (417)
+ +..++.++.||.++..|.++++++-+..
T Consensus 248 ~--~~~l~sg~~dg~i~vwd~~~~~~~~~~~ 276 (312)
T 4ery_A 248 G--GKWIVSGSEDNLVYIWNLQTKEIVQKLQ 276 (312)
T ss_dssp S--SCEEEECCTTSCEEEEETTTCCEEEEEC
T ss_pred C--CcEEEEECCCCEEEEEECCCchhhhhhh
Confidence 1 4577888999999999999999886665
No 62
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=97.83 E-value=0.0017 Score=62.81 Aligned_cols=214 Identities=11% Similarity=-0.065 Sum_probs=115.8
Q ss_pred CCEEEEeccCCcEEEEECCCCccceEeecccccC---Cccee--eEEeeeeeEEEEEecCCCceeeeeecCCCCCcceee
Q 039692 48 NGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG---LSGTG--IVVNVTVAVVVAVSRSNGELVWSTQIDPRPRSQITM 122 (417)
Q Consensus 48 ~g~v~v~~~~g~l~ald~~tG~~~W~~~~~~~~~---~~p~~--~v~~~~v~~l~ald~~tG~~~W~~~~~~~~~~~~~~ 122 (417)
+..++.++.++.++.+|..+++............ .+|.+ ++.....+.+..+|.++++.+............+..
T Consensus 68 g~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~ 147 (420)
T 3vl1_A 68 GSHLYKARLDGHDFLFNTIIRDGSKMLKRADYTAVDTAKLQMRRFILGTTEGDIKVLDSNFNLQREIDQAHVSEITKLKF 147 (420)
T ss_dssp ETTEEEEEETTEEEEEECCSEETTTTSCSCCEEEEEEECSSSCEEEEEETTSCEEEECTTSCEEEEETTSSSSCEEEEEE
T ss_pred CCeEEEEEcCCcEEEEEecccceeeEEecCCceEEEEEecCCCEEEEEECCCCEEEEeCCCcceeeecccccCccEEEEE
Confidence 4568888889999999998888765444332110 01110 111112378899999888887654422211111223
Q ss_pred ceeEEcCeEEEEeCCccCccccCcccCCCceEEEEeCCCCceeceeeecCCCCCCCCCCCCccccCCCceeecccCcccC
Q 039692 123 SGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYSGAAVWGSSPAIDVIRRQKQN 202 (417)
Q Consensus 123 sp~v~~~~v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~~gg~~~~~~pa~d~~~~~~~~ 202 (417)
+| .+..++.+.. ++.|..+|.++++.+.++..... .+. ..++.++.
T Consensus 148 ~~--~~~~l~s~s~--------------d~~i~iwd~~~~~~~~~~~~h~~-----------~v~--~~~~~~~~----- 193 (420)
T 3vl1_A 148 FP--SGEALISSSQ--------------DMQLKIWSVKDGSNPRTLIGHRA-----------TVT--DIAIIDRG----- 193 (420)
T ss_dssp CT--TSSEEEEEET--------------TSEEEEEETTTCCCCEEEECCSS-----------CEE--EEEEETTT-----
T ss_pred CC--CCCEEEEEeC--------------CCeEEEEeCCCCcCceEEcCCCC-----------cEE--EEEEcCCC-----
Confidence 33 1334555554 68999999999988876643111 011 12333321
Q ss_pred CCCCCCCCCCCcccCCCCCCeEEEEECCCCceEEEecCCCCcceeeeccCCCCCCCCCCCCCCCccCCCceE-EEEecCC
Q 039692 203 NQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPML-LTISTNG 281 (417)
Q Consensus 203 ~~~~~p~~~~~~v~~~~~~~~l~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~p~v-~~~~~~G 281 (417)
..+..+..++.+..+|.++++.+..+.......-.+.+... .+.....-......++. .....+
T Consensus 194 ----------~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~----~~~~~~~~~~~~~~~v~~~~~s~~- 258 (420)
T 3vl1_A 194 ----------RNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIAL----FVGTDRQLHEISTSKKNNLEFGTY- 258 (420)
T ss_dssp ----------TEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEE----EECCCSSCGGGCCCCCCTTCSSCT-
T ss_pred ----------CEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEE----ecCCcceeeecccCcccceEEcCC-
Confidence 22445567889999999999999888653211000000000 00000000000000000 000112
Q ss_pred eeeeEEEEEcccceEEEEECCCCcEEEEeec
Q 039692 282 RFRDVVVAVQKSGFAWAFDRDSGDIIWFKLA 312 (417)
Q Consensus 282 ~~~~~v~~~~~~G~l~ald~~tG~~lW~~~~ 312 (417)
++.|+.++.+|.++.+|..+++.+.+...
T Consensus 259 --~~~l~~~~~dg~i~i~d~~~~~~~~~~~~ 287 (420)
T 3vl1_A 259 --GKYVIAGHVSGVITVHNVFSKEQTIQLPS 287 (420)
T ss_dssp --TEEEEEEETTSCEEEEETTTCCEEEEECC
T ss_pred --CCEEEEEcCCCeEEEEECCCCceeEEccc
Confidence 45788889999999999999998887764
No 63
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=97.81 E-value=0.0056 Score=57.07 Aligned_cols=254 Identities=13% Similarity=0.101 Sum_probs=132.4
Q ss_pred cCccccccceeeeEEEeCCceeeCcEEE-CC-EEEEecc-CCcEEEEECCCCcc-ceEeecccccC----Cccee-eEEe
Q 039692 20 INPVTVRNLRLRWSFYAGKDISATPAVA-NG-VVYFPSW-NGYLYAVNAFNGAL-IWEQNLSKLTG----LSGTG-IVVN 90 (417)
Q Consensus 20 i~~~~~~~~~~~W~~~~~~~~~~~p~~~-~g-~v~v~~~-~g~l~ald~~tG~~-~W~~~~~~~~~----~~p~~-~v~~ 90 (417)
|...+..++++......+.... ..++. ++ .+|+++. ++.|+.+|.++|++ ........... .+|.+ .+.-
T Consensus 22 v~~~d~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~ 100 (331)
T 3u4y_A 22 ISFFSTDTLEILNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEGQSSMADVDITPDDQFAVT 100 (331)
T ss_dssp EEEEETTTCCEEEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEECSSCCCCEEECTTSSEEEE
T ss_pred EEEEeCcccceeeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecccCCCCccceEECCCCCEEEE
Confidence 6666677777777776654333 33443 44 5888775 78999999999998 55555443211 11211 0110
Q ss_pred eee--e--EEEEEecCCCceeeeeecCCCCCcceeeceeEEcC-eEEEEeCCccCccccCcccCCCce-EEEEeCCCCce
Q 039692 91 VTV--A--VVVAVSRSNGELVWSTQIDPRPRSQITMSGSVYMG-AFYVGLSSLEEALPADQCCTFRGS-LAKLDVRNGRI 164 (417)
Q Consensus 91 ~~v--~--~l~ald~~tG~~~W~~~~~~~~~~~~~~sp~v~~~-~v~v~~~~~~~~~~~~~~~~~~g~-l~ald~~tG~~ 164 (417)
... + .|+.+|.++|+++-..+....+ ..+..+| ++ .+|+.... ++. +..++......
T Consensus 101 ~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~-~~~~~sp---dg~~l~~~~~~-------------~~~~i~~~~~~~~g~ 163 (331)
T 3u4y_A 101 VTGLNHPFNMQSYSFLKNKFISTIPIPYDA-VGIAISP---NGNGLILIDRS-------------SANTVRRFKIDADGV 163 (331)
T ss_dssp CCCSSSSCEEEEEETTTTEEEEEEECCTTE-EEEEECT---TSSCEEEEEET-------------TTTEEEEEEECTTCC
T ss_pred ecCCCCcccEEEEECCCCCeEEEEECCCCc-cceEECC---CCCEEEEEecC-------------CCceEEEEEECCCCc
Confidence 111 2 8999999999998777654322 1122233 44 47765542 244 55555443322
Q ss_pred eceeee--cCCCCCCCCCCCCccccCCCceeecccCcccCCCCCCCCCCCCcccC-CCCCCeEEEEECCCCce---EEEe
Q 039692 165 IWQTYM--LPDNGGKRGGYSGAAVWGSSPAIDVIRRQKQNNQTTKPTHPDQCISS-DIYANSIVALDIDSGRI---AWAK 238 (417)
Q Consensus 165 ~W~~~~--~~~~~~~~~~~~gg~~~~~~pa~d~~~~~~~~~~~~~p~~~~~~v~~-~~~~~~l~ald~~tG~~---~W~~ 238 (417)
+..... .+... + . ...+++++.. .++. ...++.+..+|.++|++ +-..
T Consensus 164 ~~~~~~~~~~~~~--------~-~--~~~~~spdg~---------------~l~v~~~~~~~v~v~d~~~~~~~~~~~~~ 217 (331)
T 3u4y_A 164 LFDTGQEFISGGT--------R-P--FNITFTPDGN---------------FAFVANLIGNSIGILETQNPENITLLNAV 217 (331)
T ss_dssp EEEEEEEEECSSS--------S-E--EEEEECTTSS---------------EEEEEETTTTEEEEEECSSTTSCEEEEEE
T ss_pred EeecCCccccCCC--------C-c--cceEECCCCC---------------EEEEEeCCCCeEEEEECCCCcccceeeec
Confidence 222111 11000 0 0 0122332211 1222 23467899999999987 6555
Q ss_pred cCCCCcceeeeccCCCCCCCCCCCCCCCccCCCceEEEEecCCeeeeEEEEEc-ccceEEEEECCCCcEEEEeecCCCCC
Q 039692 239 PLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQ-KSGFAWAFDRDSGDIIWFKLAGPGGR 317 (417)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~p~v~~~~~~G~~~~~v~~~~-~~G~l~ald~~tG~~lW~~~~~~~~~ 317 (417)
+.... |.-..+..+| +.+|+.. .++.++.+|.++|++...........
T Consensus 218 ~~~~~----------------------------~~~~~~spdg---~~l~v~~~~~~~i~~~d~~~~~~~~~~~~~~~~~ 266 (331)
T 3u4y_A 218 GTNNL----------------------------PGTIVVSRDG---STVYVLTESTVDVFNFNQLSGTLSFVKSFGHGLL 266 (331)
T ss_dssp ECSSC----------------------------CCCEEECTTS---SEEEEECSSEEEEEEEETTTTEEEEEEEEECCCC
T ss_pred cCCCC----------------------------CceEEECCCC---CEEEEEEcCCCEEEEEECCCCceeeecccccccc
Confidence 53311 1111222344 4566664 47789999999998844333211100
Q ss_pred C-Ccc-----eecccccCCeEEEEeccCC-ceeeeecC
Q 039692 318 E-GGG-----VWGAATDGRRVYTNIVNND-RIIWSTAD 348 (417)
Q Consensus 318 ~-g~~-----~~~~~~~~~~vy~~~~~~~-~~~W~~~~ 348 (417)
. ... ......+++.+|+...+++ -.+|....
T Consensus 267 ~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~ 304 (331)
T 3u4y_A 267 IDPRPLFGANQMALNKTETKLFISANISRELKVFTISG 304 (331)
T ss_dssp CCCGGGTTCCCEEECTTSSEEEEEETTTTEEEEEETTS
T ss_pred cCCCCcccccceEECCCCCEEEEecCCCCcEEEEEecC
Confidence 0 000 1123346778888877665 34677653
No 64
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=97.81 E-value=0.0028 Score=60.86 Aligned_cols=221 Identities=11% Similarity=0.070 Sum_probs=129.3
Q ss_pred CCEEEEeccCCcEEEEECCCCccceEeecccc-c---CCccee--eEEeeeeeEEEEEecCCCceeeeeecCCCCCcc--
Q 039692 48 NGVVYFPSWNGYLYAVNAFNGALIWEQNLSKL-T---GLSGTG--IVVNVTVAVVVAVSRSNGELVWSTQIDPRPRSQ-- 119 (417)
Q Consensus 48 ~g~v~v~~~~g~l~ald~~tG~~~W~~~~~~~-~---~~~p~~--~v~~~~v~~l~ald~~tG~~~W~~~~~~~~~~~-- 119 (417)
+..++.++.++.|+.+| .+|+.+..+..... + ..+|.+ ++..+..+.++.+|..+++.+.++.........
T Consensus 120 ~~~l~~~~~dg~i~i~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~ 198 (425)
T 1r5m_A 120 GNSIVTGVENGELRLWN-KTGALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQHFELKETGGSSIN 198 (425)
T ss_dssp SSEEEEEETTSCEEEEE-TTSCEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEEEEECCC--------
T ss_pred CCEEEEEeCCCeEEEEe-CCCCeeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEEeeccccCcccee
Confidence 34677888899999999 68888877764321 1 111111 111122388999999999999888754332000
Q ss_pred ----------eeeceeEEcCeEEEEeCCccCccccCcccCCCceEEEEeCCCCceeceeeecCCCCCCCCCCCCccccCC
Q 039692 120 ----------ITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYSGAAVWGS 189 (417)
Q Consensus 120 ----------~~~sp~v~~~~v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~~gg~~~~~ 189 (417)
+..-...-++.++++.. ++.|+.+|..+++.+..+...... + .
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~g~i~~~d~~~~~~~~~~~~~~~~-----------i--~ 251 (425)
T 1r5m_A 199 AENHSGDGSLGVDVEWVDDDKFVIPGP--------------KGAIFVYQITEKTPTGKLIGHHGP-----------I--S 251 (425)
T ss_dssp -------CCCBSCCEEEETTEEEEECG--------------GGCEEEEETTCSSCSEEECCCSSC-----------E--E
T ss_pred eccccCCcceeeEEEEcCCCEEEEEcC--------------CCeEEEEEcCCCceeeeeccCCCc-----------e--E
Confidence 11111122566666665 589999999999887766532110 0 0
Q ss_pred CceeecccCcccCCCCCCCCCCCCcccCCCCCCeEEEEECCCCceEEEecCCCCcceeeeccCCCCCCCCCCCCCCCccC
Q 039692 190 SPAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFG 269 (417)
Q Consensus 190 ~pa~d~~~~~~~~~~~~~p~~~~~~v~~~~~~~~l~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~ 269 (417)
..++.+.. ..+..+..++.+..+|.++++.+..+.......
T Consensus 252 ~~~~~~~~---------------~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i------------------------ 292 (425)
T 1r5m_A 252 VLEFNDTN---------------KLLLSASDDGTLRIWHGGNGNSQNCFYGHSQSI------------------------ 292 (425)
T ss_dssp EEEEETTT---------------TEEEEEETTSCEEEECSSSBSCSEEECCCSSCE------------------------
T ss_pred EEEECCCC---------------CEEEEEcCCCEEEEEECCCCccceEecCCCccE------------------------
Confidence 12232221 123445567889999998888777665322211
Q ss_pred CCceEEEEecCCeeeeEEEEEcccceEEEEECCCCcEEEEeecCCCCCCCcceecc--cccCCeEEEEeccCCceeeeec
Q 039692 270 EAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDIIWFKLAGPGGREGGGVWGA--ATDGRRVYTNIVNNDRIIWSTA 347 (417)
Q Consensus 270 ~~p~v~~~~~~G~~~~~v~~~~~~G~l~ald~~tG~~lW~~~~~~~~~~g~~~~~~--~~~~~~vy~~~~~~~~~~W~~~ 347 (417)
.-.....+ ..++.++.+|.++.+|..+++.+....... .....+ ..++..+++...++.-.+|...
T Consensus 293 ---~~~~~~~~----~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~-----~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~ 360 (425)
T 1r5m_A 293 ---VSASWVGD----DKVISCSMDGSVRLWSLKQNTLLALSIVDG-----VPIFAGRISQDGQKYAVAFMDGQVNVYDLK 360 (425)
T ss_dssp ---EEEEEETT----TEEEEEETTSEEEEEETTTTEEEEEEECTT-----CCEEEEEECTTSSEEEEEETTSCEEEEECH
T ss_pred ---EEEEECCC----CEEEEEeCCCcEEEEECCCCcEeEecccCC-----ccEEEEEEcCCCCEEEEEECCCeEEEEECC
Confidence 00111112 267788899999999999999998877421 111122 2345566666655556677765
No 65
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=97.78 E-value=0.01 Score=60.54 Aligned_cols=244 Identities=10% Similarity=0.022 Sum_probs=134.9
Q ss_pred cCccccccceeeeEEEeCCceeeCcEEE--CCEEEEeccCCcEEEEEC--CCCccceEeecccc---cCCcc----ee--
Q 039692 20 INPVTVRNLRLRWSFYAGKDISATPAVA--NGVVYFPSWNGYLYAVNA--FNGALIWEQNLSKL---TGLSG----TG-- 86 (417)
Q Consensus 20 i~~~~~~~~~~~W~~~~~~~~~~~p~~~--~g~v~v~~~~g~l~ald~--~tG~~~W~~~~~~~---~~~~p----~~-- 86 (417)
|...+..+++++.++..+.... ..++. +..+|+++.++.|..+|. ++++++-+...+.. +..+| .+
T Consensus 161 V~v~D~~t~~~~~~i~~g~~~~-~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~~g~~p~~va~sp~~~~dg~~ 239 (543)
T 1nir_A 161 IALVDGDSKKIVKVIDTGYAVH-ISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKIGIEARSVESSKFKGYEDRY 239 (543)
T ss_dssp EEEEETTTCCEEEEEECSTTEE-EEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEECCSEEEEEEECCSTTCTTTE
T ss_pred EEEEECCCceEEEEEecCcccc-eEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEecCCCcceEEeCCCcCCCCCE
Confidence 4445566677776666554422 22232 458999999999999999 89998877775431 11223 11
Q ss_pred eEEee-eeeEEEEEecCCCceeeeeecCCCCC-----------cceeeceeEEcCeEEEEeCCccCccccCcccCCCceE
Q 039692 87 IVVNV-TVAVVVAVSRSNGELVWSTQIDPRPR-----------SQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSL 154 (417)
Q Consensus 87 ~v~~~-~v~~l~ald~~tG~~~W~~~~~~~~~-----------~~~~~sp~v~~~~v~v~~~~~~~~~~~~~~~~~~g~l 154 (417)
++... ..+.+..+|..|++++.+.++.+... ..+..+| .+..+|+.... ++.|
T Consensus 240 l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~--~~~~~~vs~~~-------------~g~i 304 (543)
T 1nir_A 240 TIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASH--EHPEFIVNVKE-------------TGKV 304 (543)
T ss_dssp EEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECS--SSSEEEEEETT-------------TTEE
T ss_pred EEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECC--CCCEEEEEECC-------------CCeE
Confidence 11111 12788999999999998887532100 0011111 14456665543 6899
Q ss_pred EEEeCCCCceeceeeecCCCCCCCCCCCCccccCCCceeecccCcccCCCCCCCCCCCCcccC-CCCCCeEEEEECCCCc
Q 039692 155 AKLDVRNGRIIWQTYMLPDNGGKRGGYSGAAVWGSSPAIDVIRRQKQNNQTTKPTHPDQCISS-DIYANSIVALDIDSGR 233 (417)
Q Consensus 155 ~ald~~tG~~~W~~~~~~~~~~~~~~~~gg~~~~~~pa~d~~~~~~~~~~~~~p~~~~~~v~~-~~~~~~l~ald~~tG~ 233 (417)
..+|..+++.+...... ..... ...+++++.. +++. +..++.|..+|.++|+
T Consensus 305 ~vvd~~~~~~l~~~~i~-~~~~~-----------~~~~~spdg~---------------~l~va~~~~~~v~v~D~~tg~ 357 (543)
T 1nir_A 305 LLVNYKDIDNLTVTSIG-AAPFL-----------HDGGWDSSHR---------------YFMTAANNSNKVAVIDSKDRR 357 (543)
T ss_dssp EEEECTTSSSCEEEEEE-CCSSC-----------CCEEECTTSC---------------EEEEEEGGGTEEEEEETTTTE
T ss_pred EEEEecCCCcceeEEec-cCcCc-----------cCceECCCCC---------------EEEEEecCCCeEEEEECCCCe
Confidence 99999888765422221 11000 1223443321 2232 3346789999999999
Q ss_pred eEEEecCCCCcceeeeccCCCCCCCCCCCCCCCccCCCceEEEEecCCeeeeEEEEEc--ccceEEEEECCC-------C
Q 039692 234 IAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQ--KSGFAWAFDRDS-------G 304 (417)
Q Consensus 234 ~~W~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~p~v~~~~~~G~~~~~v~~~~--~~G~l~ald~~t-------G 304 (417)
++...+...... ......+. ..++ +.+|+.+ .++.+..+|.++ +
T Consensus 358 l~~~i~~g~~ph----------------------~g~g~~~~--~p~~---g~~~~s~~~~d~~V~v~d~~~~~~~~~~~ 410 (543)
T 1nir_A 358 LSALVDVGKTPH----------------------PGRGANFV--HPKY---GPVWSTSHLGDGSISLIGTDPKNHPQYAW 410 (543)
T ss_dssp EEEEEECSSSBC----------------------CTTCEEEE--ETTT---EEEEEEEBSSSSEEEEEECCTTTCTTTBT
T ss_pred EEEeeccCCCCC----------------------CCCCcccC--CCCC---ccEEEeccCCCceEEEEEeCCCCCchhcC
Confidence 998877542110 00111221 1122 3455553 468999999998 6
Q ss_pred cEEEEeecCCCCCCCcceecccccCCeEEEEe
Q 039692 305 DIIWFKLAGPGGREGGGVWGAATDGRRVYTNI 336 (417)
Q Consensus 305 ~~lW~~~~~~~~~~g~~~~~~~~~~~~vy~~~ 336 (417)
+.+-+.+.... +........+++.||+..
T Consensus 411 ~~v~~l~~~g~---~~~~v~~~pdg~~l~v~~ 439 (543)
T 1nir_A 411 KKVAELQGQGG---GSLFIKTHPKSSHLYVDT 439 (543)
T ss_dssp SEEEEEECSCS---CCCCEECCTTCCEEEECC
T ss_pred eEEEEEEcCCC---CceEEEcCCCCCcEEEec
Confidence 66655554210 111112334667777765
No 66
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=97.77 E-value=0.0074 Score=55.18 Aligned_cols=221 Identities=12% Similarity=0.065 Sum_probs=120.6
Q ss_pred CCEEEEec-cCCcEEEEECCCCccceEeecccc---cCCcceeeEE---ee--e------eeEEEEEecCCCceeeeeec
Q 039692 48 NGVVYFPS-WNGYLYAVNAFNGALIWEQNLSKL---TGLSGTGIVV---NV--T------VAVVVAVSRSNGELVWSTQI 112 (417)
Q Consensus 48 ~g~v~v~~-~~g~l~ald~~tG~~~W~~~~~~~---~~~~p~~~v~---~~--~------v~~l~ald~~tG~~~W~~~~ 112 (417)
++.+|+++ .++.|+.+|.+ |+.++++..... ....|.++.. ++ + .+.|+.+| .+|+.+.++..
T Consensus 40 ~g~l~v~~~~~~~i~~~d~~-g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~d-~~g~~~~~~~~ 117 (286)
T 1q7f_A 40 QNDIIVADTNNHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYN-QYGQFVRKFGA 117 (286)
T ss_dssp TCCEEEEEGGGTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEEC-TTSCEEEEECT
T ss_pred CCCEEEEECCCCEEEEECCC-CcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEEEEC-CCCcEEEEecC
Confidence 57888884 57899999985 888887754321 0122333322 12 1 26788898 67888877654
Q ss_pred CCCC-CcceeeceeEEcCeEEEEeCCccCccccCcccCCCceEEEEeCCCCceeceeeecCCCCCCCCCCCCccccCCCc
Q 039692 113 DPRP-RSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYSGAAVWGSSP 191 (417)
Q Consensus 113 ~~~~-~~~~~~sp~v~~~~v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~~gg~~~~~~p 191 (417)
.... ...+...| ++.+|+.... ++.|+.+|.+ |+.++.+........ . ...
T Consensus 118 ~~~~~~~~i~~~~---~g~l~v~~~~-------------~~~i~~~~~~-g~~~~~~~~~~~~~~---------p--~~i 169 (286)
T 1q7f_A 118 TILQHPRGVTVDN---KGRIIVVECK-------------VMRVIIFDQN-GNVLHKFGCSKHLEF---------P--NGV 169 (286)
T ss_dssp TTCSCEEEEEECT---TSCEEEEETT-------------TTEEEEECTT-SCEEEEEECTTTCSS---------E--EEE
T ss_pred ccCCCceEEEEeC---CCCEEEEECC-------------CCEEEEEcCC-CCEEEEeCCCCccCC---------c--EEE
Confidence 2210 01111122 5678887653 5789999974 888777643211000 0 012
Q ss_pred eeecccCcccCCCCCCCCCCCCcccCC-CCCCeEEEEECCCCceEEEecCCCCcceeeeccCCCCCCCCCCCCCCCccCC
Q 039692 192 AIDVIRRQKQNNQTTKPTHPDQCISSD-IYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGE 270 (417)
Q Consensus 192 a~d~~~~~~~~~~~~~p~~~~~~v~~~-~~~~~l~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~ 270 (417)
+++++ +.+++. ..++.|+.+|+ +|+.+..+...... .
T Consensus 170 ~~~~~----------------g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~g~~-------------------------~ 207 (286)
T 1q7f_A 170 VVNDK----------------QEIFISDNRAHCVKVFNY-EGQYLRQIGGEGIT-------------------------N 207 (286)
T ss_dssp EECSS----------------SEEEEEEGGGTEEEEEET-TCCEEEEESCTTTS-------------------------C
T ss_pred EECCC----------------CCEEEEECCCCEEEEEcC-CCCEEEEEccCCcc-------------------------C
Confidence 33332 223332 34578888986 57777666543210 1
Q ss_pred CceEEEEecCCeeeeEEEEEc-ccc-eEEEEECCCCcEEEEeecCCCCCCCcceecccc-cCCeEEEEeccCCceeeeec
Q 039692 271 APMLLTISTNGRFRDVVVAVQ-KSG-FAWAFDRDSGDIIWFKLAGPGGREGGGVWGAAT-DGRRVYTNIVNNDRIIWSTA 347 (417)
Q Consensus 271 ~p~v~~~~~~G~~~~~v~~~~-~~G-~l~ald~~tG~~lW~~~~~~~~~~g~~~~~~~~-~~~~vy~~~~~~~~~~W~~~ 347 (417)
.|.-..+..+| .+|+++ .++ .|..+|. +|+.+........ ......+++ .++.+|+.+.+..-.+|+..
T Consensus 208 ~p~~i~~d~~G----~l~v~~~~~~~~i~~~~~-~g~~~~~~~~~~~---~~~~~~i~~~~~g~l~vs~~~~~v~v~~~~ 279 (286)
T 1q7f_A 208 YPIGVGINSNG----EILIADNHNNFNLTIFTQ-DGQLISALESKVK---HAQCFDVALMDDGSVVLASKDYRLYIYRYV 279 (286)
T ss_dssp SEEEEEECTTC----CEEEEECSSSCEEEEECT-TSCEEEEEEESSC---CSCEEEEEEETTTEEEEEETTTEEEEEECS
T ss_pred CCcEEEECCCC----CEEEEeCCCCEEEEEECC-CCCEEEEEcccCC---CCcceeEEECCCCcEEEECCCCeEEEEEcc
Confidence 22222222233 355554 454 8999995 6888877765311 111223333 35689998754445568764
Q ss_pred C
Q 039692 348 D 348 (417)
Q Consensus 348 ~ 348 (417)
.
T Consensus 280 ~ 280 (286)
T 1q7f_A 280 Q 280 (286)
T ss_dssp C
T ss_pred c
Confidence 3
No 67
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=97.77 E-value=0.012 Score=56.88 Aligned_cols=190 Identities=14% Similarity=0.017 Sum_probs=113.2
Q ss_pred CCEEEEeccCCcEEEEECCCCccceEeeccc--ccC---Cccee--eEEeeeeeEEEEEecCCCceeeeeecCCCCCcce
Q 039692 48 NGVVYFPSWNGYLYAVNAFNGALIWEQNLSK--LTG---LSGTG--IVVNVTVAVVVAVSRSNGELVWSTQIDPRPRSQI 120 (417)
Q Consensus 48 ~g~v~v~~~~g~l~ald~~tG~~~W~~~~~~--~~~---~~p~~--~v~~~~v~~l~ald~~tG~~~W~~~~~~~~~~~~ 120 (417)
++.++.++.++.|+.+|.++|+......... .+. .+|.+ ++.....+.+..+|..+++.+.+...... .+
T Consensus 103 ~~~l~~~~~d~~v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~---~v 179 (401)
T 4aez_A 103 NLNVVAVALERNVYVWNADSGSVSALAETDESTYVASVKWSHDGSFLSVGLGNGLVDIYDVESQTKLRTMAGHQA---RV 179 (401)
T ss_dssp TTSEEEEEETTEEEEEETTTCCEEEEEECCTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSS---CE
T ss_pred CCCEEEEECCCeEEEeeCCCCcEeEeeecCCCCCEEEEEECCCCCEEEEECCCCeEEEEECcCCeEEEEecCCCC---ce
Confidence 4567777889999999999999887776631 111 11211 11111238899999999998877763221 11
Q ss_pred eeceeEEcCeEEEEeCCccCccccCcccCCCceEEEEeCCC-CceeceeeecCCCCCCCCCCCCccccCCCceeecccCc
Q 039692 121 TMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRN-GRIIWQTYMLPDNGGKRGGYSGAAVWGSSPAIDVIRRQ 199 (417)
Q Consensus 121 ~~sp~v~~~~v~v~~~~~~~~~~~~~~~~~~g~l~ald~~t-G~~~W~~~~~~~~~~~~~~~~gg~~~~~~pa~d~~~~~ 199 (417)
. +-...+..++.+.. ++.|..+|.++ ++.+..+..... .+. ..++.++
T Consensus 180 ~-~~~~~~~~l~~~~~--------------dg~i~i~d~~~~~~~~~~~~~~~~-----------~v~--~~~~~~~--- 228 (401)
T 4aez_A 180 G-CLSWNRHVLSSGSR--------------SGAIHHHDVRIANHQIGTLQGHSS-----------EVC--GLAWRSD--- 228 (401)
T ss_dssp E-EEEEETTEEEEEET--------------TSEEEEEETTSSSCEEEEEECCSS-----------CEE--EEEECTT---
T ss_pred E-EEEECCCEEEEEcC--------------CCCEEEEecccCcceeeEEcCCCC-----------Cee--EEEEcCC---
Confidence 1 11223455665554 68999999984 444444332110 010 1122221
Q ss_pred ccCCCCCCCCCCCCcccCCCCCCeEEEEECCCCceEEEecCCCCcceeeeccCCCCCCCCCCCCCCCccCCCceEEEEec
Q 039692 200 KQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTIST 279 (417)
Q Consensus 200 ~~~~~~~~p~~~~~~v~~~~~~~~l~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~p~v~~~~~ 279 (417)
...+..+..++.+..+|.++++.+..+........ -.....
T Consensus 229 ------------~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~v~---------------------------~~~~~p 269 (401)
T 4aez_A 229 ------------GLQLASGGNDNVVQIWDARSSIPKFTKTNHNAAVK---------------------------AVAWCP 269 (401)
T ss_dssp ------------SSEEEEEETTSCEEEEETTCSSEEEEECCCSSCCC---------------------------EEEECT
T ss_pred ------------CCEEEEEeCCCeEEEccCCCCCccEEecCCcceEE---------------------------EEEECC
Confidence 12344556678999999999999887764332110 011112
Q ss_pred CCeeeeEEEEEc--ccceEEEEECCCCcEEEEeec
Q 039692 280 NGRFRDVVVAVQ--KSGFAWAFDRDSGDIIWFKLA 312 (417)
Q Consensus 280 ~G~~~~~v~~~~--~~G~l~ald~~tG~~lW~~~~ 312 (417)
+| ..++..++ .++.++.+|..+++.+.....
T Consensus 270 ~~--~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~~ 302 (401)
T 4aez_A 270 WQ--SNLLATGGGTMDKQIHFWNAATGARVNTVDA 302 (401)
T ss_dssp TS--TTEEEEECCTTTCEEEEEETTTCCEEEEEEC
T ss_pred CC--CCEEEEecCCCCCEEEEEECCCCCEEEEEeC
Confidence 22 24555544 799999999999999988875
No 68
>2zux_A YESW protein; beta-propeller, lyase, rhamnose complex; HET: RAM; 1.32A {Bacillus subtilis} PDB: 2z8s_A* 2z8r_A*
Probab=97.74 E-value=0.0045 Score=62.24 Aligned_cols=94 Identities=19% Similarity=0.277 Sum_probs=62.4
Q ss_pred cCccccccceeeeEEEeCCcee-----eCcEEEC----C--EEEEeccCCc----------------------------E
Q 039692 20 INPVTVRNLRLRWSFYAGKDIS-----ATPAVAN----G--VVYFPSWNGY----------------------------L 60 (417)
Q Consensus 20 i~~~~~~~~~~~W~~~~~~~~~-----~~p~~~~----g--~v~v~~~~g~----------------------------l 60 (417)
|.+.+. +++.+|+..++..+. .++.+.| | -|++.+.+|. |
T Consensus 153 l~aY~l-dG~~LW~idlg~ni~aGa~yt~~~V~DlDGDGkaEIvv~TadGt~dg~g~~ig~~~~dyrn~~g~il~GpEyL 231 (591)
T 2zux_A 153 IDAYKL-DGTKLWRINLGKNIRAGAHYTQFMVYDLDGDGKAEVAMKTADGTKDGTGKVIGNANADYRNEQGRVLSGPEYL 231 (591)
T ss_dssp EEEECT-TSCEEEEEECCTTSCCSTTSCCCEEECSSSSSSCEEEEEECTTCBCTTSCBCSSTTCCCBCTTSCBCSSCCEE
T ss_pred EEEEEC-CCCEEEEEcCCCCcccccccCceeEEEcCCCCcceEEEEccCCcccCCceEecccccccccccceeecCCcEE
Confidence 667765 499999999875433 3455542 2 4777655543 9
Q ss_pred EEEECCCCccceEeecccccC-------------------------CcceeeEEeeee--eEEEEEecCCCc--eeeeee
Q 039692 61 YAVNAFNGALIWEQNLSKLTG-------------------------LSGTGIVVNVTV--AVVVAVSRSNGE--LVWSTQ 111 (417)
Q Consensus 61 ~ald~~tG~~~W~~~~~~~~~-------------------------~~p~~~v~~~~v--~~l~ald~~tG~--~~W~~~ 111 (417)
..||-+||+++++........ ..|..++.++++ ..|.|+|.++|+ ++|++.
T Consensus 232 ~vfdG~TG~~l~~~~~~p~rg~~~~WGD~ygnR~drf~~~vayLDG~~Ps~v~~rGyYtr~~v~A~d~~~~~L~~~W~~d 311 (591)
T 2zux_A 232 TVFQGSTGKELVTANFEPARGNVSDWGDSYGNRVDRFLAGIAYLDGQRPSLIMTRGYYAKTMLVAYNFRDGKLSKLWTLD 311 (591)
T ss_dssp EEEETTTCCEEEEEECSSCCCCGGGGTCSSSSGGGCEEEEEECTTSSSCEEEEEECCSSSCEEEEEEEETTEEEEEEEEE
T ss_pred EEEeCCCCCEEecccCCCCCCcccccccccccccccceeeEEECCCCCceEEEeccccceeEEEEEECCCCceEEEEEec
Confidence 999999999999988742111 011112334433 679999999996 599999
Q ss_pred cCC
Q 039692 112 IDP 114 (417)
Q Consensus 112 ~~~ 114 (417)
...
T Consensus 312 ~~~ 314 (591)
T 2zux_A 312 SSK 314 (591)
T ss_dssp TTS
T ss_pred CCC
Confidence 653
No 69
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=97.73 E-value=0.0045 Score=58.43 Aligned_cols=221 Identities=13% Similarity=0.095 Sum_probs=110.6
Q ss_pred cEEEEECCCCccceEeecccccCCcceeeEEe--e--ee-----eEEEEEecCCCc--eeeeeecCCCC---Ccc--eee
Q 039692 59 YLYAVNAFNGALIWEQNLSKLTGLSGTGIVVN--V--TV-----AVVVAVSRSNGE--LVWSTQIDPRP---RSQ--ITM 122 (417)
Q Consensus 59 ~l~ald~~tG~~~W~~~~~~~~~~~p~~~v~~--~--~v-----~~l~ald~~tG~--~~W~~~~~~~~---~~~--~~~ 122 (417)
.|+.+|.++|+++-...... ...|.++..+ + ++ +.|+.+|. +|+ .+......... ... ...
T Consensus 70 ~i~~~d~~~g~~~~~~~~~~--~~~p~gia~d~~g~l~v~d~~~~~v~~~~~-~g~~~~~~~~~~~~~~g~~~~~~~~P~ 146 (329)
T 3fvz_A 70 TILVIDPNNAEILQSSGKNL--FYLPHGLSIDTDGNYWVTDVALHQVFKLDP-HSKEGPLLILGRSMQPGSDQNHFCQPT 146 (329)
T ss_dssp CEEEECTTTCCEEEEECTTT--CSSEEEEEECTTSCEEEEETTTTEEEEECT-TCSSCCSEEESBTTBCCCSTTCCSSEE
T ss_pred cEEEEECCCCeEEeccCCCc--cCCceEEEECCCCCEEEEECCCCEEEEEeC-CCCeEEEEEecccCCCCCCccccCCCc
Confidence 69999999999865443221 1234443221 2 11 67888885 455 44444311100 000 111
Q ss_pred ceeEE--cCeEEEEeC-CccCccccCcccCCCceEEEEeCCCCceeceeeecCCCCC-CCCCCCCccccCCCceeecccC
Q 039692 123 SGSVY--MGAFYVGLS-SLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNGG-KRGGYSGAAVWGSSPAIDVIRR 198 (417)
Q Consensus 123 sp~v~--~~~v~v~~~-~~~~~~~~~~~~~~~g~l~ald~~tG~~~W~~~~~~~~~~-~~~~~~gg~~~~~~pa~d~~~~ 198 (417)
..++. ++.+|+... . ++.|+.+|. +|+.++.+........ .++ ....-...+++++.+
T Consensus 147 ~ia~~~~~g~lyv~d~~~-------------~~~I~~~~~-~g~~~~~~~~~g~~~~~~~~----~~~~p~gia~d~~~g 208 (329)
T 3fvz_A 147 DVAVEPSTGAVFVSDGYC-------------NSRIVQFSP-SGKFVTQWGEESSGSSPRPG----QFSVPHSLALVPHLD 208 (329)
T ss_dssp EEEECTTTCCEEEEECSS-------------CCEEEEECT-TSCEEEEECEECCSSSCCTT----EESCEEEEEEETTTT
T ss_pred EEEEeCCCCeEEEEeCCC-------------CCeEEEEcC-CCCEEEEeccCCCCCCCCCc----ccCCCcEEEEECCCC
Confidence 22233 577888764 3 579999994 6999887754321100 000 000001134554322
Q ss_pred cccCCCCCCCCCCCCcccC-CCCCCeEEEEECCCCceEEEecCCCCcceeeeccCCCCCCCCCCCCCCCccCCCceEEEE
Q 039692 199 QKQNNQTTKPTHPDQCISS-DIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTI 277 (417)
Q Consensus 199 ~~~~~~~~~p~~~~~~v~~-~~~~~~l~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~p~v~~~ 277 (417)
.+|+ ...++.|..+|+++|+.+..+.........+.. .+.. -++...
T Consensus 209 ---------------~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~----------------~~~p-g~~~~~ 256 (329)
T 3fvz_A 209 ---------------QLCVADRENGRIQCFKTDTKEFVREIKHASFGRNVFAI----------------SYIP-GFLFAV 256 (329)
T ss_dssp ---------------EEEEEETTTTEEEEEETTTCCEEEEECCTTTTTCEEEE----------------EEET-TEEEEE
T ss_pred ---------------EEEEEECCCCEEEEEECCCCcEEEEEeccccCCCccee----------------eecC-CEEEEe
Confidence 2332 245678999999999998877544321100000 0000 111110
Q ss_pred ecCCeeeeEEEEE-cccceEEEEECCCCcEEEEeecCCCCCCCcceeccccc-CCeEEEEeccCC
Q 039692 278 STNGRFRDVVVAV-QKSGFAWAFDRDSGDIIWFKLAGPGGREGGGVWGAATD-GRRVYTNIVNND 340 (417)
Q Consensus 278 ~~~G~~~~~v~~~-~~~G~l~ald~~tG~~lW~~~~~~~~~~g~~~~~~~~~-~~~vy~~~~~~~ 340 (417)
+| .+|++ ..+..++.+|..+|+++-.....+... .....++++ ++.+|+.+...+
T Consensus 257 --~g----~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~--~~p~~ia~~~dG~lyvad~~~~ 313 (329)
T 3fvz_A 257 --NG----KPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHF--DMPHDIVASEDGTVYIGDAHTN 313 (329)
T ss_dssp --EC----CCCTTCSCCCCEEEEETTTCCEEEEECCSSSCC--SSEEEEEECTTSEEEEEESSSC
T ss_pred --CC----CEEeccCCCcEEEEEEcCCCeEEEEEcCCCCcc--CCeeEEEECCCCCEEEEECCCC
Confidence 11 13332 234579999999999887764321111 112234443 458999987665
No 70
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=97.71 E-value=0.0023 Score=65.38 Aligned_cols=109 Identities=11% Similarity=-0.050 Sum_probs=70.5
Q ss_pred CCEEEEec-cCCcEEEEECCCCccceEeecccccC---Cccee--eEEeeeeeEEEEEec--CCCceeeeeecCCCCCcc
Q 039692 48 NGVVYFPS-WNGYLYAVNAFNGALIWEQNLSKLTG---LSGTG--IVVNVTVAVVVAVSR--SNGELVWSTQIDPRPRSQ 119 (417)
Q Consensus 48 ~g~v~v~~-~~g~l~ald~~tG~~~W~~~~~~~~~---~~p~~--~v~~~~v~~l~ald~--~tG~~~W~~~~~~~~~~~ 119 (417)
++.+|+.+ .++.|..+|.++|+++.++..+.... .+|.+ ++.....+.|..+|. ++++++-+.+....+ ..
T Consensus 148 ~~~~~vs~~~d~~V~v~D~~t~~~~~~i~~g~~~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~~g~~p-~~ 226 (543)
T 1nir_A 148 PNLFSVTLRDAGQIALVDGDSKKIVKVIDTGYAVHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKIGIEA-RS 226 (543)
T ss_dssp GGEEEEEEGGGTEEEEEETTTCCEEEEEECSTTEEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEECCSEE-EE
T ss_pred CCEEEEEEcCCCeEEEEECCCceEEEEEecCcccceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEecCCCc-ce
Confidence 56777765 56899999999999998887653211 12211 011111289999999 899988777743221 11
Q ss_pred eeeceeE--EcCeEEEEeCCccCccccCcccCCCceEEEEeCCCCceeceeee
Q 039692 120 ITMSGSV--YMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYM 170 (417)
Q Consensus 120 ~~~sp~v--~~~~v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~~~W~~~~ 170 (417)
+..+|.- .+..+|++... ++.|..+|.+|++++.+++.
T Consensus 227 va~sp~~~~dg~~l~v~~~~-------------~~~v~v~D~~t~~~~~~i~~ 266 (543)
T 1nir_A 227 VESSKFKGYEDRYTIAGAYW-------------PPQFAIMDGETLEPKQIVST 266 (543)
T ss_dssp EEECCSTTCTTTEEEEEEEE-------------SSEEEEEETTTCCEEEEEEC
T ss_pred EEeCCCcCCCCCEEEEEEcc-------------CCeEEEEeccccccceeecc
Confidence 1222200 24568887643 57899999999999988775
No 71
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=97.68 E-value=0.025 Score=53.30 Aligned_cols=225 Identities=11% Similarity=0.024 Sum_probs=125.2
Q ss_pred CEEEEeccCCcEEEEECCCCccceEeeccccc----CCccee--eEEeeeeeEEEEEecCCCceeee--eecCCCCCcce
Q 039692 49 GVVYFPSWNGYLYAVNAFNGALIWEQNLSKLT----GLSGTG--IVVNVTVAVVVAVSRSNGELVWS--TQIDPRPRSQI 120 (417)
Q Consensus 49 g~v~v~~~~g~l~ald~~tG~~~W~~~~~~~~----~~~p~~--~v~~~~v~~l~ald~~tG~~~W~--~~~~~~~~~~~ 120 (417)
..++.++.++.|...|..+++.+-........ ..+|.+ ++..+..+.+..+|..+++...+ ..+.... ..+
T Consensus 68 ~~l~s~s~Dg~v~iWd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~h~-~~v 146 (340)
T 1got_B 68 RLLLSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHT-GYL 146 (340)
T ss_dssp SEEEEEETTTEEEEEETTTCCEEEEEECSSSCEEEEEECTTSSEEEEEETTCEEEEEETTTCSBSCEEEEEEECCS-SCE
T ss_pred CEEEEEeCCCcEEEEECCCCCcceEeecCCccEEEEEECCCCCEEEEEeCCCeEEEEECccCCCcceeEEEecCCC-ccE
Confidence 46777788999999999999987776654321 111211 12222337777888776543222 1121111 112
Q ss_pred eeceeEEcCeEEEEeCCccCccccCcccCCCceEEEEeCCCCceeceeeecCCCCCCCCCCCCccccCCCceeecccCcc
Q 039692 121 TMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYSGAAVWGSSPAIDVIRRQK 200 (417)
Q Consensus 121 ~~sp~v~~~~v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~~gg~~~~~~pa~d~~~~~~ 200 (417)
.+.....++.++.+.. ++.|..+|.++|+.+-.+..... .+. ..++.+.
T Consensus 147 ~~~~~~~~~~l~s~s~--------------d~~i~~wd~~~~~~~~~~~~h~~-----------~v~--~~~~~~~---- 195 (340)
T 1got_B 147 SCCRFLDDNQIVTSSG--------------DTTCALWDIETGQQTTTFTGHTG-----------DVM--SLSLAPD---- 195 (340)
T ss_dssp EEEEEEETTEEEEEET--------------TSCEEEEETTTTEEEEEECCCSS-----------CEE--EEEECTT----
T ss_pred EEEEECCCCcEEEEEC--------------CCcEEEEECCCCcEEEEEcCCCC-----------ceE--EEEECCC----
Confidence 2222223566666655 68999999999988765543110 010 1122221
Q ss_pred cCCCCCCCCCCCCcccCCCCCCeEEEEECCCCceEEEecCCCCcceeeeccCCCCCCCCCCCCCCCccCCCceEEEEecC
Q 039692 201 QNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTISTN 280 (417)
Q Consensus 201 ~~~~~~~p~~~~~~v~~~~~~~~l~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~p~v~~~~~~ 280 (417)
...+..+..++.+...|.++++.+-.+....... .-.....+
T Consensus 196 -----------~~~l~sg~~d~~v~~wd~~~~~~~~~~~~h~~~v---------------------------~~v~~~p~ 237 (340)
T 1got_B 196 -----------TRLFVSGACDASAKLWDVREGMCRQTFTGHESDI---------------------------NAICFFPN 237 (340)
T ss_dssp -----------SSEEEEEETTSCEEEEETTTCSEEEEECCCSSCE---------------------------EEEEECTT
T ss_pred -----------CCEEEEEeCCCcEEEEECCCCeeEEEEcCCcCCE---------------------------EEEEEcCC
Confidence 1234455678889999999998876665432211 11112223
Q ss_pred CeeeeEEEEEcccceEEEEECCCCcEEEEeecCCCCCCCcceecccccCCeEEEEeccCCceeeeec
Q 039692 281 GRFRDVVVAVQKSGFAWAFDRDSGDIIWFKLAGPGGREGGGVWGAATDGRRVYTNIVNNDRIIWSTA 347 (417)
Q Consensus 281 G~~~~~v~~~~~~G~l~ald~~tG~~lW~~~~~~~~~~g~~~~~~~~~~~~vy~~~~~~~~~~W~~~ 347 (417)
++.++.++.||.+...|..+++.+........ ..+-.......++..+.+...++.-.+|...
T Consensus 238 ---~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~-~~~v~~~~~s~~g~~l~~g~~d~~i~vwd~~ 300 (340)
T 1got_B 238 ---GNAFATGSDDATCRLFDLRADQELMTYSHDNI-ICGITSVSFSKSGRLLLAGYDDFNCNVWDAL 300 (340)
T ss_dssp ---SSEEEEEETTSCEEEEETTTTEEEEEECCTTC-CSCEEEEEECTTSSEEEEEETTSEEEEEETT
T ss_pred ---CCEEEEEcCCCcEEEEECCCCcEEEEEccCCc-ccceEEEEECCCCCEEEEECCCCeEEEEEcc
Confidence 35788889999999999999988876653210 0001111122345555555555556677654
No 72
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=97.65 E-value=0.0044 Score=61.18 Aligned_cols=128 Identities=13% Similarity=-0.000 Sum_probs=86.3
Q ss_pred cCccccccceeeeEEEeCCceeeCcEEE--CCEEEEecc----------CCcEEEEECCCCccceEeeccc--cc--CCc
Q 039692 20 INPVTVRNLRLRWSFYAGKDISATPAVA--NGVVYFPSW----------NGYLYAVNAFNGALIWEQNLSK--LT--GLS 83 (417)
Q Consensus 20 i~~~~~~~~~~~W~~~~~~~~~~~p~~~--~g~v~v~~~----------~g~l~ald~~tG~~~W~~~~~~--~~--~~~ 83 (417)
|...+..+++++.+..++..- ..++. +.++|+++. ++.|..||.++++++-+..+++ .. ...
T Consensus 101 VsVID~~t~~vv~~I~vG~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g~~ 178 (426)
T 3c75_H 101 QFVIDGSTGRILGMTDGGFLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFLVGTY 178 (426)
T ss_dssp EEEEETTTTEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCC
T ss_pred EEEEECCCCEEEEEEECCCCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCccccccCCC
Confidence 667778899999999988643 34443 447999873 5689999999999998888751 10 112
Q ss_pred ceeeEE--ee---e------eeEEEEEecCCCceeeeeecCCCCCcceeeceeEEcCeEEEEeCCccCccccCcccCCCc
Q 039692 84 GTGIVV--NV---T------VAVVVAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRG 152 (417)
Q Consensus 84 p~~~v~--~~---~------v~~l~ald~~tG~~~W~~~~~~~~~~~~~~sp~v~~~~v~v~~~~~~~~~~~~~~~~~~g 152 (417)
|.++.. ++ + -+.|..+|.++++++-+++++.. ....| .+.+.|+.... +|
T Consensus 179 P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g~----~~~~p--~g~~~~v~~~~-------------dG 239 (426)
T 3c75_H 179 QWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPDC----YHIFP--ASPTVFYMNCR-------------DG 239 (426)
T ss_dssp GGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSE----EEEEE--EETTEEEEEET-------------TS
T ss_pred cceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCCc----eeecc--CCCcEEEEEcC-------------CC
Confidence 322111 11 1 26899999999999998886531 11112 24466665543 68
Q ss_pred eEEEEeCCCCceecee
Q 039692 153 SLAKLDVRNGRIIWQT 168 (417)
Q Consensus 153 ~l~ald~~tG~~~W~~ 168 (417)
.+..+|..++++.++.
T Consensus 240 ~~~~V~~~~~~v~~~~ 255 (426)
T 3c75_H 240 SLARVDFADGETKVTN 255 (426)
T ss_dssp SEEEEECCTTCCEEEE
T ss_pred CEEEEECCCCcEEEEe
Confidence 8999999889888753
No 73
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=97.65 E-value=0.014 Score=54.63 Aligned_cols=221 Identities=9% Similarity=-0.054 Sum_probs=121.8
Q ss_pred CCEEEEeccCCcEEEEECCCCccceEeecccccC---Cccee--eEEeeee-----eEEEEEecCCCceeeeeecCC-CC
Q 039692 48 NGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG---LSGTG--IVVNVTV-----AVVVAVSRSNGELVWSTQIDP-RP 116 (417)
Q Consensus 48 ~g~v~v~~~~g~l~ald~~tG~~~W~~~~~~~~~---~~p~~--~v~~~~v-----~~l~ald~~tG~~~W~~~~~~-~~ 116 (417)
+..++.++.++.|..+|.++++.+..+.....+. .+|.+ ++..... +.++.+|..+++......... ..
T Consensus 86 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~ 165 (369)
T 3zwl_B 86 TKYCVTGSADYSIKLWDVSNGQCVATWKSPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEP 165 (369)
T ss_dssp SSEEEEEETTTEEEEEETTTCCEEEEEECSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSC
T ss_pred CCEEEEEeCCCeEEEEECCCCcEEEEeecCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccce
Confidence 4477778889999999999999998888543321 11211 1111111 677777776665433333111 00
Q ss_pred C------------cceeeceeEEcCeEEEEeCCccCccccCcccCCCceEEEEeCCC-CceeceeeecCCCCCCCCCCCC
Q 039692 117 R------------SQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRN-GRIIWQTYMLPDNGGKRGGYSG 183 (417)
Q Consensus 117 ~------------~~~~~sp~v~~~~v~v~~~~~~~~~~~~~~~~~~g~l~ald~~t-G~~~W~~~~~~~~~~~~~~~~g 183 (417)
. ..+..+| .+..++++.. ++.|..+|.++ ++.+..+......
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~--~~~~l~~~~~--------------dg~i~i~d~~~~~~~~~~~~~~~~~--------- 220 (369)
T 3zwl_B 166 IHKIITHEGLDAATVAGWST--KGKYIIAGHK--------------DGKISKYDVSNNYEYVDSIDLHEKS--------- 220 (369)
T ss_dssp SEEEECCTTCCCEEEEEECG--GGCEEEEEET--------------TSEEEEEETTTTTEEEEEEECCSSC---------
T ss_pred eeeccCCcCccceeEEEEcC--CCCEEEEEcC--------------CCEEEEEECCCCcEeEEEEecCCCc---------
Confidence 0 0011112 1334555554 58999999998 6666665542110
Q ss_pred ccccCCCceeecccCcccCCCCCCCCCCCCcccCCCCCCeEEEEECCCCceEEEecCCCCcceeeeccCCCCCCCCCCCC
Q 039692 184 AAVWGSSPAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPN 263 (417)
Q Consensus 184 g~~~~~~pa~d~~~~~~~~~~~~~p~~~~~~v~~~~~~~~l~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~c~~~~~ 263 (417)
+. ..++.++ ...+..+..++.+..+|.++++.+..+......
T Consensus 221 --v~--~~~~~~~---------------~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~------------------- 262 (369)
T 3zwl_B 221 --IS--DMQFSPD---------------LTYFITSSRDTNSFLVDVSTLQVLKKYETDCPL------------------- 262 (369)
T ss_dssp --EE--EEEECTT---------------SSEEEEEETTSEEEEEETTTCCEEEEEECSSCE-------------------
T ss_pred --ee--EEEECCC---------------CCEEEEecCCceEEEEECCCCceeeeecCCCCc-------------------
Confidence 00 1222221 123445566789999999999999888733211
Q ss_pred CCCccCCCceEEEEecCCeeeeEEEEEcccc--------------eEEEEECCCCcEEEEeecCCCCCCCcceeccc--c
Q 039692 264 LDADFGEAPMLLTISTNGRFRDVVVAVQKSG--------------FAWAFDRDSGDIIWFKLAGPGGREGGGVWGAA--T 327 (417)
Q Consensus 264 ~~~~~~~~p~v~~~~~~G~~~~~v~~~~~~G--------------~l~ald~~tG~~lW~~~~~~~~~~g~~~~~~~--~ 327 (417)
.-.....+ +..+++++.++ .+...|..+++.+....... .....++ .
T Consensus 263 ---------~~~~~~~~---~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~-----~~v~~~~~s~ 325 (369)
T 3zwl_B 263 ---------NTAVITPL---KEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQGHF-----GPLNTVAISP 325 (369)
T ss_dssp ---------EEEEECSS---SSEEEEEECCC-------------CEEEEEETTTCCEEEEEECCS-----SCEEEEEECT
T ss_pred ---------eeEEecCC---CceEEEeecCCCceEEEEecCCCcceeEEEecCCCcchhheeccc-----CcEEEEEECC
Confidence 00111122 23455555444 78999999999888776421 1112222 2
Q ss_pred cCCeEEEEeccCCceeeeecC
Q 039692 328 DGRRVYTNIVNNDRIIWSTAD 348 (417)
Q Consensus 328 ~~~~vy~~~~~~~~~~W~~~~ 348 (417)
++..++....++.-.+|..+.
T Consensus 326 ~~~~l~s~~~dg~v~iw~~~~ 346 (369)
T 3zwl_B 326 QGTSYASGGEDGFIRLHHFEK 346 (369)
T ss_dssp TSSEEEEEETTSEEEEEEECH
T ss_pred CCCEEEEEcCCCeEEEEECcc
Confidence 455555555555566787653
No 74
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=97.64 E-value=0.006 Score=56.85 Aligned_cols=106 Identities=5% Similarity=-0.071 Sum_probs=64.4
Q ss_pred CCEEEEec-cCCcEEEEECCCCccceEeecccccCCcceeeEE-ee---e-----eeEEEEEecCCCce-eeeeecCCCC
Q 039692 48 NGVVYFPS-WNGYLYAVNAFNGALIWEQNLSKLTGLSGTGIVV-NV---T-----VAVVVAVSRSNGEL-VWSTQIDPRP 116 (417)
Q Consensus 48 ~g~v~v~~-~~g~l~ald~~tG~~~W~~~~~~~~~~~p~~~v~-~~---~-----v~~l~ald~~tG~~-~W~~~~~~~~ 116 (417)
.+.+|+++ .++.|..+|.++|+++.....+... +...+. ++ + .+.|+.+|.++|++ .........+
T Consensus 9 ~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~---~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~ 85 (331)
T 3u4y_A 9 SNFGIVVEQHLRRISFFSTDTLEILNQITLGYDF---VDTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEGQSS 85 (331)
T ss_dssp CCEEEEEEGGGTEEEEEETTTCCEEEEEECCCCE---EEEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEECSSC
T ss_pred CCEEEEEecCCCeEEEEeCcccceeeeEEccCCc---ceEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecccCCCC
Confidence 45677765 5689999999999998887764211 110011 11 1 16899999999997 5555544332
Q ss_pred CcceeeceeEEcCe-EEEEeCCccCccccCcccCCCceEEEEeCCCCceeceeee
Q 039692 117 RSQITMSGSVYMGA-FYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYM 170 (417)
Q Consensus 117 ~~~~~~sp~v~~~~-v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~~~W~~~~ 170 (417)
...+..+| ++. +|+.... . ..+.|..+|.++|+.+-.+..
T Consensus 86 ~~~~~~s~---dg~~l~~~~~~--~---------~~~~i~v~d~~~~~~~~~~~~ 126 (331)
T 3u4y_A 86 MADVDITP---DDQFAVTVTGL--N---------HPFNMQSYSFLKNKFISTIPI 126 (331)
T ss_dssp CCCEEECT---TSSEEEECCCS--S---------SSCEEEEEETTTTEEEEEEEC
T ss_pred ccceEECC---CCCEEEEecCC--C---------CcccEEEEECCCCCeEEEEEC
Confidence 22133333 444 5532221 0 012899999999998776554
No 75
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=97.63 E-value=0.0083 Score=58.09 Aligned_cols=226 Identities=10% Similarity=-0.018 Sum_probs=116.2
Q ss_pred cCccccccceeeeEEEeCC-------ceeeCcEEE--CCEEEEecc--CCcEEEEECCCCccceE-eecccccCCccee-
Q 039692 20 INPVTVRNLRLRWSFYAGK-------DISATPAVA--NGVVYFPSW--NGYLYAVNAFNGALIWE-QNLSKLTGLSGTG- 86 (417)
Q Consensus 20 i~~~~~~~~~~~W~~~~~~-------~~~~~p~~~--~g~v~v~~~--~g~l~ald~~tG~~~W~-~~~~~~~~~~p~~- 86 (417)
|...+..++++.-+..+++ ......++. +..+|+.+. .+.|..|| ++|+++-+ ..++......|.+
T Consensus 99 v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~~~~~~~~~~~~ 177 (373)
T 2mad_H 99 VEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSSPTCYHIHPGAP 177 (373)
T ss_pred EEEEECCCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCCCceEEEEeCCC
Confidence 3344445566655555541 112233443 457998874 47899999 99999776 6654321111110
Q ss_pred --eEEeeeeeEEEEEecCCCceeeeeecCCCC--Ccceeecee--EEcCeEEEEeCCccCccccCcccCCCceEEEEeCC
Q 039692 87 --IVVNVTVAVVVAVSRSNGELVWSTQIDPRP--RSQITMSGS--VYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVR 160 (417)
Q Consensus 87 --~v~~~~v~~l~ald~~tG~~~W~~~~~~~~--~~~~~~sp~--v~~~~v~v~~~~~~~~~~~~~~~~~~g~l~ald~~ 160 (417)
.+.....+.+..+|. +|+..+........ ...+...|. -.++.+++... .+.++.+|..
T Consensus 178 ~~~~~~~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~--------------~~~v~vid~~ 242 (373)
T 2mad_H 178 STFYLLCAQGGLAKTDH-AGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVY--------------SGKILQADIS 242 (373)
T ss_pred ceEEEEcCCCCEEEEEC-CCcEEEEEeccccccCCcceeecceeEecCCEEEEEcC--------------CceEEEEecc
Confidence 011112288999999 99998765421100 011122221 12445554443 4789999997
Q ss_pred CCceec--eeeecCCCCCCCCCCCCccccCCCceeecccCcccCCCCCCCCCCCCcccCC----------CCCCeEEEEE
Q 039692 161 NGRIIW--QTYMLPDNGGKRGGYSGAAVWGSSPAIDVIRRQKQNNQTTKPTHPDQCISSD----------IYANSIVALD 228 (417)
Q Consensus 161 tG~~~W--~~~~~~~~~~~~~~~~gg~~~~~~pa~d~~~~~~~~~~~~~p~~~~~~v~~~----------~~~~~l~ald 228 (417)
+++..- .++.........+-..++.. ..+++++.. .+|.. ...+.|..||
T Consensus 243 ~~~~~v~~~~~~~~~~~~~~~~~p~g~~---~~~~s~d~~---------------~lyV~~~~~~~~~~~~~~~~V~VID 304 (373)
T 2mad_H 243 AAGATNKAPIDALSGGRKADTWRPGGWQ---QVAYLKSSD---------------GIYLLTSEQSAWKLHAAAKEVTSVT 304 (373)
T ss_pred CCcceEeeeeeecCCcccccceecCceE---eEEECCCCC---------------EEEEEeccCCcccccCCCCeEEEEE
Confidence 664321 11111100000000000000 012222211 12221 1246899999
Q ss_pred CCCCceEEEecCCCCcceeeeccCCCCCCCCCCCCCCCccCCCceEEEEecCCeeeeEEEEEc-ccceEEEEECCCCcEE
Q 039692 229 IDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQ-KSGFAWAFDRDSGDII 307 (417)
Q Consensus 229 ~~tG~~~W~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~p~v~~~~~~G~~~~~v~~~~-~~G~l~ald~~tG~~l 307 (417)
.+|++++=+.+.+.. |.-..+..+| +..+|+.. .++.|..+|.++++++
T Consensus 305 ~~t~~vv~~i~~g~~----------------------------p~~i~~s~Dg--~~~l~v~~~~~~~V~ViD~~t~~vv 354 (373)
T 2mad_H 305 GLVGQTSSQISLGHD----------------------------VDAISVAQDG--GPDLYALSAGTEVLHIYDAGAGDQD 354 (373)
T ss_pred CCCCEEEEEEECCCC----------------------------cCeEEECCCC--CeEEEEEcCCCCeEEEEECCCCCEE
Confidence 999999877765432 1111223344 23678777 5899999999999998
Q ss_pred EE
Q 039692 308 WF 309 (417)
Q Consensus 308 W~ 309 (417)
=+
T Consensus 355 ~~ 356 (373)
T 2mad_H 355 QS 356 (373)
T ss_pred ee
Confidence 66
No 76
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=97.63 E-value=0.029 Score=54.04 Aligned_cols=225 Identities=9% Similarity=-0.015 Sum_probs=123.3
Q ss_pred CCEEEEeccCCcEEEEECCCCccceEeecccc-cCC---cceeeEEeeeeeEEEEEecC-CCceeeeeecCCCCCcceee
Q 039692 48 NGVVYFPSWNGYLYAVNAFNGALIWEQNLSKL-TGL---SGTGIVVNVTVAVVVAVSRS-NGELVWSTQIDPRPRSQITM 122 (417)
Q Consensus 48 ~g~v~v~~~~g~l~ald~~tG~~~W~~~~~~~-~~~---~p~~~v~~~~v~~l~ald~~-tG~~~W~~~~~~~~~~~~~~ 122 (417)
+..+++++.+|.|..+|.++++.+.++..... +.+ .+.-++.....+.++.+|.. .++.+............+..
T Consensus 146 ~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~ 225 (401)
T 4aez_A 146 GSFLSVGLGNGLVDIYDVESQTKLRTMAGHQARVGCLSWNRHVLSSGSRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAW 225 (401)
T ss_dssp SSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEE
T ss_pred CCEEEEECCCCeEEEEECcCCeEEEEecCCCCceEEEEECCCEEEEEcCCCCEEEEecccCcceeeEEcCCCCCeeEEEE
Confidence 34777888899999999999998877764321 100 00000111122888889987 45555554432211111223
Q ss_pred ceeEEcCeEEEEeCCccCccccCcccCCCceEEEEeCCCCceeceeeecCCCCCCCCCCCCccccCCCceeecccCcccC
Q 039692 123 SGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYSGAAVWGSSPAIDVIRRQKQN 202 (417)
Q Consensus 123 sp~v~~~~v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~~gg~~~~~~pa~d~~~~~~~~ 202 (417)
+| .+..++++.. ++.|..+|.++++.+.++....... ...++.+...
T Consensus 226 ~~--~~~~l~s~~~--------------d~~v~iwd~~~~~~~~~~~~~~~~v-------------~~~~~~p~~~---- 272 (401)
T 4aez_A 226 RS--DGLQLASGGN--------------DNVVQIWDARSSIPKFTKTNHNAAV-------------KAVAWCPWQS---- 272 (401)
T ss_dssp CT--TSSEEEEEET--------------TSCEEEEETTCSSEEEEECCCSSCC-------------CEEEECTTST----
T ss_pred cC--CCCEEEEEeC--------------CCeEEEccCCCCCccEEecCCcceE-------------EEEEECCCCC----
Confidence 33 2334555554 6899999999999888765421110 1123322111
Q ss_pred CCCCCCCCCCCcccC--CCCCCeEEEEECCCCceEEEecCCCCcceeeeccCCCCCCCCCCCCCCCccCCCceEEEEecC
Q 039692 203 NQTTKPTHPDQCISS--DIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTISTN 280 (417)
Q Consensus 203 ~~~~~p~~~~~~v~~--~~~~~~l~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~p~v~~~~~~ 280 (417)
..+.. +..++.+..+|.++|+.+..+...... .-.....+
T Consensus 273 ----------~ll~~~~gs~d~~i~i~d~~~~~~~~~~~~~~~v----------------------------~~~~~s~~ 314 (401)
T 4aez_A 273 ----------NLLATGGGTMDKQIHFWNAATGARVNTVDAGSQV----------------------------TSLIWSPH 314 (401)
T ss_dssp ----------TEEEEECCTTTCEEEEEETTTCCEEEEEECSSCE----------------------------EEEEECSS
T ss_pred ----------CEEEEecCCCCCEEEEEECCCCCEEEEEeCCCcE----------------------------EEEEECCC
Confidence 11122 336899999999999998887643210 11111223
Q ss_pred CeeeeEEEE--EcccceEEEEECCCCcEEEEeecCCCCCCCcce-ecccccCCeEEEEeccCCceeeeecC
Q 039692 281 GRFRDVVVA--VQKSGFAWAFDRDSGDIIWFKLAGPGGREGGGV-WGAATDGRRVYTNIVNNDRIIWSTAD 348 (417)
Q Consensus 281 G~~~~~v~~--~~~~G~l~ald~~tG~~lW~~~~~~~~~~g~~~-~~~~~~~~~vy~~~~~~~~~~W~~~~ 348 (417)
+..+++ +..+|.++.+|..+++..-...... ..+... .....++..++....++.-.+|+...
T Consensus 315 ---~~~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~--h~~~v~~~~~s~dg~~l~s~~~dg~i~iw~~~~ 380 (401)
T 4aez_A 315 ---SKEIMSTHGFPDNNLSIWSYSSSGLTKQVDIPA--HDTRVLYSALSPDGRILSTAASDENLKFWRVYD 380 (401)
T ss_dssp ---SSEEEEEECTTTCEEEEEEEETTEEEEEEEEEC--CSSCCCEEEECTTSSEEEEECTTSEEEEEECCC
T ss_pred ---CCeEEEEeecCCCcEEEEecCCccceeEEEecC--CCCCEEEEEECCCCCEEEEEeCCCcEEEEECCC
Confidence 345555 4479999999999987665544311 011111 11223455565555555566787654
No 77
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=97.62 E-value=0.0053 Score=59.73 Aligned_cols=125 Identities=14% Similarity=0.008 Sum_probs=79.3
Q ss_pred cCccccccceeeeEEEeCCceeeCcEEE--CCEEEEecc----------CCcEEEEECCCCccceEeeccc--c--cCCc
Q 039692 20 INPVTVRNLRLRWSFYAGKDISATPAVA--NGVVYFPSW----------NGYLYAVNAFNGALIWEQNLSK--L--TGLS 83 (417)
Q Consensus 20 i~~~~~~~~~~~W~~~~~~~~~~~p~~~--~g~v~v~~~----------~g~l~ald~~tG~~~W~~~~~~--~--~~~~ 83 (417)
|...+..+++++.+...+..- ..++. +..+|+++. ++.|..||++|++++-+..++. . ....
T Consensus 61 V~ViD~~t~~v~~~I~vG~~P--~va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~ 138 (386)
T 3sjl_D 61 QFVIDGEAGRVIGMIDGGFLP--NPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTY 138 (386)
T ss_dssp EEEEETTTTEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCC
T ss_pred EEEEECCCCeEEEEEECCCCC--cEEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCccccccCCC
Confidence 666777889999888887653 24444 346998862 4679999999999998887753 1 1122
Q ss_pred ceeeEE--ee---e------eeEEEEEecCCCceeeeeecCCCCCcceeeceeEEcCeEEEEeCCccCccccCcccCCCc
Q 039692 84 GTGIVV--NV---T------VAVVVAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRG 152 (417)
Q Consensus 84 p~~~v~--~~---~------v~~l~ald~~tG~~~W~~~~~~~~~~~~~~sp~v~~~~v~v~~~~~~~~~~~~~~~~~~g 152 (417)
|..+.. ++ + -+.+..+|.++++++-++++++. ...-| .+.+.|+.... +|
T Consensus 139 P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~g~----~~~~P--~g~~~~~~~~~-------------DG 199 (386)
T 3sjl_D 139 PWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPDC----YHIFP--TAPDTFFMHCR-------------DG 199 (386)
T ss_dssp GGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSE----EEEEE--EETTEEEEEET-------------TS
T ss_pred CceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECCCc----ceeec--CCCceeEEECC-------------CC
Confidence 322111 11 1 27899999999999988886532 11112 13333333221 68
Q ss_pred eEEEEeCCC-Ccee
Q 039692 153 SLAKLDVRN-GRII 165 (417)
Q Consensus 153 ~l~ald~~t-G~~~ 165 (417)
++.-++..+ |++.
T Consensus 200 ~~~~v~~~~~g~v~ 213 (386)
T 3sjl_D 200 SLAKVAFGTEGTPE 213 (386)
T ss_dssp CEEEEECCSSSCCE
T ss_pred CEEEEECCCCCeEE
Confidence 888888876 7763
No 78
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=97.61 E-value=0.0014 Score=62.84 Aligned_cols=226 Identities=11% Similarity=0.033 Sum_probs=117.5
Q ss_pred CCEEEEeccCCcEEEEECCCCccceEeecc--c---cc---CCccee--eEEeeeeeEEEEEecCCCceeeeeecCCCCC
Q 039692 48 NGVVYFPSWNGYLYAVNAFNGALIWEQNLS--K---LT---GLSGTG--IVVNVTVAVVVAVSRSNGELVWSTQIDPRPR 117 (417)
Q Consensus 48 ~g~v~v~~~~g~l~ald~~tG~~~W~~~~~--~---~~---~~~p~~--~v~~~~v~~l~ald~~tG~~~W~~~~~~~~~ 117 (417)
++.+++++.++.|...|.++|+.+-..... . .+ ..+|.+ ++..+..+.+..+|..+++.+..++......
T Consensus 105 d~~~l~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~~~v 184 (357)
T 4g56_B 105 EKGILVASDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLKSYNAHSSEV 184 (357)
T ss_dssp TTEEEEEETTSCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCE
T ss_pred CCCEEEEECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCCCE
Confidence 678888888999999998888765433221 1 11 011211 1111223889999999999988876432211
Q ss_pred cceeeceeEEcCe-EEEEeCCccCccccCcccCCCceEEEEeCCCCceeceeeecCCCCCCCCCCCCccccCCCceeecc
Q 039692 118 SQITMSGSVYMGA-FYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYSGAAVWGSSPAIDVI 196 (417)
Q Consensus 118 ~~~~~sp~v~~~~-v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~~gg~~~~~~pa~d~~ 196 (417)
..+..+| .++. ++.+.. ++.|..+|.++++.+-......... .+ ...++.+.
T Consensus 185 ~~v~~s~--~~~~~~~s~~~--------------dg~v~~wd~~~~~~~~~~~~~~~~~---------~v--~~v~~sp~ 237 (357)
T 4g56_B 185 NCVAACP--GKDTIFLSCGE--------------DGRILLWDTRKPKPATRIDFCASDT---------IP--TSVTWHPE 237 (357)
T ss_dssp EEEEECT--TCSSCEEEEET--------------TSCEEECCTTSSSCBCBCCCTTCCS---------CE--EEEEECTT
T ss_pred EEEEEcc--CCCceeeeecc--------------CCceEEEECCCCceeeeeeeccccc---------cc--cchhhhhc
Confidence 1111122 1223 333433 6889999998888765444321110 00 01122221
Q ss_pred cCcccCCCCCCCCCCCCcccCCCCCCeEEEEECCCCceEEEecCCCCcceeeeccCCCCCCCCCCCCCCCccCCCceEEE
Q 039692 197 RRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLT 276 (417)
Q Consensus 197 ~~~~~~~~~~~p~~~~~~v~~~~~~~~l~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~p~v~~ 276 (417)
. ...+..+..++.+..+|.++++.+-.+........ -..
T Consensus 238 ~--------------~~~la~g~~d~~i~~wd~~~~~~~~~~~~~~~~v~---------------------------~l~ 276 (357)
T 4g56_B 238 K--------------DDTFACGDETGNVSLVNIKNPDSAQTSAVHSQNIT---------------------------GLA 276 (357)
T ss_dssp S--------------TTEEEEEESSSCEEEEESSCGGGCEEECCCSSCEE---------------------------EEE
T ss_pred c--------------cceEEEeecccceeEEECCCCcEeEEEeccceeEE---------------------------EEE
Confidence 1 11233445678889999998887766554322110 011
Q ss_pred EecCCeeeeEEEEEcccceEEEEECCCCcEEEEeecCCCCCCCcceecccc---cCCeEEEEeccCCceeeeecCC
Q 039692 277 ISTNGRFRDVVVAVQKSGFAWAFDRDSGDIIWFKLAGPGGREGGGVWGAAT---DGRRVYTNIVNNDRIIWSTADP 349 (417)
Q Consensus 277 ~~~~G~~~~~v~~~~~~G~l~ald~~tG~~lW~~~~~~~~~~g~~~~~~~~---~~~~vy~~~~~~~~~~W~~~~~ 349 (417)
...+| ..+|..++.||.++..|.++|+++..... . .....++. ++..+.....++.-.+|..+..
T Consensus 277 ~sp~~--~~~lasgs~D~~i~iwd~~~~~~~~~~~H-----~-~~V~~vafsP~d~~~l~s~s~Dg~v~iW~~~~~ 344 (357)
T 4g56_B 277 YSYHS--SPFLASISEDCTVAVLDADFSEVFRDLSH-----R-DFVTGVAWSPLDHSKFTTVGWDHKVLHHHLPSE 344 (357)
T ss_dssp ECSSS--SCCEEEEETTSCEEEECTTSCEEEEECCC-----S-SCEEEEEECSSSTTEEEEEETTSCEEEEECC--
T ss_pred EcCCC--CCEEEEEeCCCEEEEEECCCCcEeEECCC-----C-CCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCC
Confidence 22233 34677788999999999999998765432 1 12223333 3445555555566788987643
No 79
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=97.58 E-value=0.022 Score=55.01 Aligned_cols=127 Identities=15% Similarity=0.009 Sum_probs=75.7
Q ss_pred cCccccccceeeeEEEeCCceeeCcEEE--CCEEEEecc----------CCcEEEEECCCCccceEeeccc--cc--CCc
Q 039692 20 INPVTVRNLRLRWSFYAGKDISATPAVA--NGVVYFPSW----------NGYLYAVNAFNGALIWEQNLSK--LT--GLS 83 (417)
Q Consensus 20 i~~~~~~~~~~~W~~~~~~~~~~~p~~~--~g~v~v~~~----------~g~l~ald~~tG~~~W~~~~~~--~~--~~~ 83 (417)
|...+..++++.=+.+.+ ....+++. +..+|+++. ++.|..||.++++++-+..++. .. ...
T Consensus 49 v~v~D~~t~~~~~~i~~g--~~p~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~ 126 (373)
T 2mad_H 49 QWVLDAGSGSILGHVNGG--FLPNPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPY 126 (373)
T ss_pred EEEEECCCCeEEEEecCC--CCCCeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCCC
Confidence 344455566665333333 22244443 447999862 5679999999999988877751 10 011
Q ss_pred ceee-EE-ee---------eeeEEEEEecCCCceeee-eecCCCCCcceeeceeEEcCeEEEEeCCccCccccCcccCCC
Q 039692 84 GTGI-VV-NV---------TVAVVVAVSRSNGELVWS-TQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFR 151 (417)
Q Consensus 84 p~~~-v~-~~---------~v~~l~ald~~tG~~~W~-~~~~~~~~~~~~~sp~v~~~~v~v~~~~~~~~~~~~~~~~~~ 151 (417)
|..+ +. ++ .-+.|..+| ++|+++-+ .+++.. +... ..+.+.|+.... +
T Consensus 127 p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~~~~----~~~~--~~~~~~~~~~~~-------------d 186 (373)
T 2mad_H 127 SWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSSPTC----YHIH--PGAPSTFYLLCA-------------Q 186 (373)
T ss_pred ccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCCCce----EEEE--eCCCceEEEEcC-------------C
Confidence 2211 11 11 126799999 99999876 654321 1111 124456665543 6
Q ss_pred ceEEEEeCCCCceeceee
Q 039692 152 GSLAKLDVRNGRIIWQTY 169 (417)
Q Consensus 152 g~l~ald~~tG~~~W~~~ 169 (417)
+.+..+|. +|+..++..
T Consensus 187 g~~~~vd~-~g~~~~~~~ 203 (373)
T 2mad_H 187 GGLAKTDH-AGGAAGAGL 203 (373)
T ss_pred CCEEEEEC-CCcEEEEEe
Confidence 89999999 999997654
No 80
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=97.57 E-value=0.0041 Score=61.44 Aligned_cols=111 Identities=7% Similarity=-0.045 Sum_probs=75.4
Q ss_pred EECCEEEEeccC-----CcEEEEECCCCccceEeecccccC--Cccee---eEEee---------eeeEEEEEecCCCce
Q 039692 46 VANGVVYFPSWN-----GYLYAVNAFNGALIWEQNLSKLTG--LSGTG---IVVNV---------TVAVVVAVSRSNGEL 106 (417)
Q Consensus 46 ~~~g~v~v~~~~-----g~l~ald~~tG~~~W~~~~~~~~~--~~p~~---~v~~~---------~v~~l~ald~~tG~~ 106 (417)
....++|+.+.. +.|..||++|++++.+++++.... .+|-+ .+... ..+.|..||..++++
T Consensus 82 ~~~~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~vG~~Pgia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~v 161 (426)
T 3c75_H 82 PDARRVYIQDPAHFAAITQQFVIDGSTGRILGMTDGGFLPHPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLP 161 (426)
T ss_dssp CCTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECSSCEEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCE
T ss_pred CCCCEEEEECCCcCCCCCeEEEEECCCCEEEEEEECCCCCceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcE
Confidence 456789999863 699999999999999999874211 12211 11111 125799999999999
Q ss_pred eeeeecCCC-------CCcceeeceeEEcCeEEEEeCCccCccccCcccCCCceEEEEeCCCCceeceeee
Q 039692 107 VWSTQIDPR-------PRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYM 170 (417)
Q Consensus 107 ~W~~~~~~~-------~~~~~~~sp~v~~~~v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~~~W~~~~ 170 (417)
+-++++++. ....+..+| .+..+|+.... ..+.|..+|.++++++-+++.
T Consensus 162 v~~I~v~g~~r~~~g~~P~~~~~sp--DGk~lyV~n~~------------~~~~VsVID~~t~kvv~~I~v 218 (426)
T 3c75_H 162 IADIELPDAPRFLVGTYQWMNALTP--DNKNLLFYQFS------------PAPAVGVVDLEGKTFDRMLDV 218 (426)
T ss_dssp EEEEEETTCCCCCBSCCGGGSEECT--TSSEEEEEECS------------SSCEEEEEETTTTEEEEEEEC
T ss_pred EEEEECCCccccccCCCcceEEEcC--CCCEEEEEecC------------CCCeEEEEECCCCeEEEEEEc
Confidence 988887511 111233333 24568887542 136899999999999988776
No 81
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=97.56 E-value=0.046 Score=51.44 Aligned_cols=191 Identities=9% Similarity=-0.050 Sum_probs=108.9
Q ss_pred CCEEEEeccCCcEEEEECCCCccceEe--ecccccCC-cceeeEEee------eeeEEEEEecCCCceeeeeecCCCCCc
Q 039692 48 NGVVYFPSWNGYLYAVNAFNGALIWEQ--NLSKLTGL-SGTGIVVNV------TVAVVVAVSRSNGELVWSTQIDPRPRS 118 (417)
Q Consensus 48 ~g~v~v~~~~g~l~ald~~tG~~~W~~--~~~~~~~~-~p~~~v~~~------~v~~l~ald~~tG~~~W~~~~~~~~~~ 118 (417)
+..++.++.++.+..+|.++++...+. .+...... ..+....++ ..+.+...|..+|+.+-.+........
T Consensus 109 ~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~ 188 (340)
T 1got_B 109 GNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVM 188 (340)
T ss_dssp SSEEEEEETTCEEEEEETTTCSBSCEEEEEEECCSSCEEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEE
T ss_pred CCEEEEEeCCCeEEEEECccCCCcceeEEEecCCCccEEEEEECCCCcEEEEECCCcEEEEECCCCcEEEEEcCCCCceE
Confidence 346777778899999998876543222 22111110 000001111 227888899999988766653221111
Q ss_pred ceeeceeEEcCeEE-EEeCCccCccccCcccCCCceEEEEeCCCCceeceeeecCCCCCCCCCCCCccccCCCceeeccc
Q 039692 119 QITMSGSVYMGAFY-VGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYSGAAVWGSSPAIDVIR 197 (417)
Q Consensus 119 ~~~~sp~v~~~~v~-v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~~gg~~~~~~pa~d~~~ 197 (417)
.+..+| ++.++ .+.. ++.|..+|.++++.+-++..... .+. ..++.++
T Consensus 189 ~~~~~~---~~~~l~sg~~--------------d~~v~~wd~~~~~~~~~~~~h~~-----------~v~--~v~~~p~- 237 (340)
T 1got_B 189 SLSLAP---DTRLFVSGAC--------------DASAKLWDVREGMCRQTFTGHES-----------DIN--AICFFPN- 237 (340)
T ss_dssp EEEECT---TSSEEEEEET--------------TSCEEEEETTTCSEEEEECCCSS-----------CEE--EEEECTT-
T ss_pred EEEECC---CCCEEEEEeC--------------CCcEEEEECCCCeeEEEEcCCcC-----------CEE--EEEEcCC-
Confidence 122233 44444 4443 68999999999988765543111 010 1122221
Q ss_pred CcccCCCCCCCCCCCCcccCCCCCCeEEEEECCCCceEEEecCCCCcceeeeccCCCCCCCCCCCCCCCccCCCceEEEE
Q 039692 198 RQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTI 277 (417)
Q Consensus 198 ~~~~~~~~~~p~~~~~~v~~~~~~~~l~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~p~v~~~ 277 (417)
...+..++.++.+..+|.++++.+..+...... ....-...
T Consensus 238 --------------~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~~-------------------------~~v~~~~~ 278 (340)
T 1got_B 238 --------------GNAFATGSDDATCRLFDLRADQELMTYSHDNII-------------------------CGITSVSF 278 (340)
T ss_dssp --------------SSEEEEEETTSCEEEEETTTTEEEEEECCTTCC-------------------------SCEEEEEE
T ss_pred --------------CCEEEEEcCCCcEEEEECCCCcEEEEEccCCcc-------------------------cceEEEEE
Confidence 123445567889999999999888766533211 01111122
Q ss_pred ecCCeeeeEEEEEcccceEEEEECCCCcEEEEee
Q 039692 278 STNGRFRDVVVAVQKSGFAWAFDRDSGDIIWFKL 311 (417)
Q Consensus 278 ~~~G~~~~~v~~~~~~G~l~ald~~tG~~lW~~~ 311 (417)
..+ +..++.++.+|.+...|..+++.+-...
T Consensus 279 s~~---g~~l~~g~~d~~i~vwd~~~~~~~~~~~ 309 (340)
T 1got_B 279 SKS---GRLLLAGYDDFNCNVWDALKADRAGVLA 309 (340)
T ss_dssp CTT---SSEEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred CCC---CCEEEEECCCCeEEEEEcccCcEeeEee
Confidence 234 3578888999999999999998876655
No 82
>2zuy_A YESX protein; beta-propeller, lyase; 1.65A {Bacillus subtilis}
Probab=97.55 E-value=0.012 Score=59.52 Aligned_cols=216 Identities=14% Similarity=0.205 Sum_probs=111.1
Q ss_pred EEEEEecCCCceeeeeecCCCCC-cceeeceeEE----cC--eEEEEeCCccC----cc---c-------cCcccCCCce
Q 039692 95 VVVAVSRSNGELVWSTQIDPRPR-SQITMSGSVY----MG--AFYVGLSSLEE----AL---P-------ADQCCTFRGS 153 (417)
Q Consensus 95 ~l~ald~~tG~~~W~~~~~~~~~-~~~~~sp~v~----~~--~v~v~~~~~~~----~~---~-------~~~~~~~~g~ 153 (417)
.|.|++++ |+.+|++.+..... +....++.++ ++ -|++.+..+.. .+ + .--..+-...
T Consensus 156 ~l~aY~ld-G~~LW~idlg~Ni~aGahyt~~~V~DlDGDGkaEIvv~TadGt~dg~g~vigd~~~dyr~~~g~il~G~ey 234 (620)
T 2zuy_A 156 LIDAYKLD-GTFLWRINLGRNIRAGAHYTQFMVYDLDGDGKAEIAMKTADGTTDGKGHIIGDEQADFRNEQGRILSGPEY 234 (620)
T ss_dssp EEEEECTT-SCEEEEEECCTTSCCSTTSCCCEEECSSSSSSCEEEEEECTTCBCTTSCBCSCTTCCCBCTTSCBCSSCCE
T ss_pred EEEEEECC-CCEEEEEcCCCCcccccccCceeEEEcCCCCcceEEEEccCCcccCcceeecccccccccccceEecCCeE
Confidence 78899974 99999998754321 1123455554 22 26666543210 00 0 0001122467
Q ss_pred EEEEeCCCCceeceeeecCCCCCCCCCCCCccccCCCceeecccC---cccCCCCC-CCCCCCCcccC-CC-CCCeEEEE
Q 039692 154 LAKLDVRNGRIIWQTYMLPDNGGKRGGYSGAAVWGSSPAIDVIRR---QKQNNQTT-KPTHPDQCISS-DI-YANSIVAL 227 (417)
Q Consensus 154 l~ald~~tG~~~W~~~~~~~~~~~~~~~~gg~~~~~~pa~d~~~~---~~~~~~~~-~p~~~~~~v~~-~~-~~~~l~al 227 (417)
|..+|-+||+.+++.+..|.... -..|+-.+. .... .......+ .|. .+.. +- ....|.|+
T Consensus 235 L~vfdG~TG~~l~t~~~~p~rg~-------~~~WGD~yG--nR~drf~~~vayLDG~~Ps----~v~~rG~Ytr~~v~A~ 301 (620)
T 2zuy_A 235 LTVFKGETGEALTTVEYEPPRGK-------LEDWGDGYG--NRMDRFLAGTAYLDGERPS----LVMARGYYTRTVLVAY 301 (620)
T ss_dssp EEEEETTTCCEEEEEECSSCCCS-------GGGGTSSSS--TTTTCEEEEEECTTCC-CE----EEEEECSSSSCEEEEE
T ss_pred EEEEcCCCcceeeecccCCCcCc-------ccccccccc--ccccccceeEEecCCCCce----EEEecCcccceeEEEE
Confidence 99999999999999887543211 011221100 0000 00000000 110 0111 11 13568899
Q ss_pred ECCCCc--eEEEecCCCCcceeeeccCCCCCCCCCCCCCCCccCCCceEEEEecCCeeeeEEEEEcccceEEEEECCCCc
Q 039692 228 DIDSGR--IAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGD 305 (417)
Q Consensus 228 d~~tG~--~~W~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~p~v~~~~~~G~~~~~v~~~~~~G~l~ald~~tG~ 305 (417)
|.++|+ .+|++.........+.+ .....+.+.|+.-||+ .++|| ++ .++| .+|+
T Consensus 302 d~~~g~L~~~W~~ds~~~~~~~~~g----------------qg~H~~svaDVDGDG~-dEIv~-Gs-----~~iD-~dG~ 357 (620)
T 2zuy_A 302 DFRNGRLKKRWVFDSNQPGHEAYAG----------------QGNHSLSVADVDGDGK-DEIIY-GA-----MAVD-HDGT 357 (620)
T ss_dssp EEETTEEEEEEEEETTSTTCGGGTT----------------CCCSSCEEECCSSSSS-CEEEE-TT-----EEEC-TTSS
T ss_pred EccCCceeeeeEecCCCCccccccc----------------ccCcCceEEecCCCCc-eeEEE-ee-----eEEC-CCCC
Confidence 998884 79999875321111100 0124788999888886 44444 43 3677 7899
Q ss_pred EEEEeecCCC----------CCCCcceecccc---cCCeEEEEeccCCceeeeecC
Q 039692 306 IIWFKLAGPG----------GREGGGVWGAAT---DGRRVYTNIVNNDRIIWSTAD 348 (417)
Q Consensus 306 ~lW~~~~~~~----------~~~g~~~~~~~~---~~~~vy~~~~~~~~~~W~~~~ 348 (417)
.+|+...+.+ ...|-..+.+-- ....+.+.+..+++++|+...
T Consensus 358 ~L~st~~gHGDa~hv~d~dP~rpGlev~~~~E~~~~~~G~~~~DA~tG~vlw~~~~ 413 (620)
T 2zuy_A 358 GLYSTGLGHGDAMHVGDLDPSRKGLEVFQVHEDATKPYGLSLRDAGTGEILWGVHA 413 (620)
T ss_dssp EEEECSCCCCSCEEEECSCTTSSSCEEEEECCCTTSSCSEEEEETTTCCEEEEECC
T ss_pred EEeecCCCCCceeEEEecCCCCCCCEEEEEecCCCCCCceEEEECCCCcEEEEecC
Confidence 9999887532 111111111110 111344567788899999864
No 83
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=97.53 E-value=0.042 Score=57.93 Aligned_cols=225 Identities=9% Similarity=-0.012 Sum_probs=126.8
Q ss_pred CCEEEEeccCCcEEEEECCCCccceEeecccc-c---CCccee--eEEeeeeeEEEEEecCCCce-eeeeecCCCCCcce
Q 039692 48 NGVVYFPSWNGYLYAVNAFNGALIWEQNLSKL-T---GLSGTG--IVVNVTVAVVVAVSRSNGEL-VWSTQIDPRPRSQI 120 (417)
Q Consensus 48 ~g~v~v~~~~g~l~ald~~tG~~~W~~~~~~~-~---~~~p~~--~v~~~~v~~l~ald~~tG~~-~W~~~~~~~~~~~~ 120 (417)
+..+++++.++.|..+|.++|+.+.+...... + ..+|.+ ++.....+.+..+|..++.. .-...........+
T Consensus 67 ~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~ 146 (814)
T 3mkq_A 67 KNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCV 146 (814)
T ss_dssp GTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEECCSSCEEEE
T ss_pred CCEEEEEeCCCeEEEEECCCCcEEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEcCCCCcEEEE
Confidence 45788888899999999999998888764321 1 111211 11111237888888877633 22222111110111
Q ss_pred eeceeEEcCeEEEEeCCccCccccCcccCCCceEEEEeCCCCceeceeeecCCCCCCCCCCCCccccCCCceeecccCcc
Q 039692 121 TMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYSGAAVWGSSPAIDVIRRQK 200 (417)
Q Consensus 121 ~~sp~v~~~~v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~~gg~~~~~~pa~d~~~~~~ 200 (417)
..+|. .+..++++.. ++.|..+|..+++...+........ + ...++.+
T Consensus 147 ~~~p~-~~~~l~~~~~--------------dg~v~vwd~~~~~~~~~~~~~~~~~----------v--~~~~~~~----- 194 (814)
T 3mkq_A 147 AFNPK-DPSTFASGCL--------------DRTVKVWSLGQSTPNFTLTTGQERG----------V--NYVDYYP----- 194 (814)
T ss_dssp EEETT-EEEEEEEEET--------------TSEEEEEETTCSSCSEEEECCCTTC----------C--CEEEECC-----
T ss_pred EEEcC-CCCEEEEEeC--------------CCeEEEEECCCCcceeEEecCCCCC----------E--EEEEEEE-----
Confidence 11110 1234555554 6899999999888887766522110 0 0112211
Q ss_pred cCCCCCCCCCCCCcccCCCCCCeEEEEECCCCceEEEecCCCCcceeeeccCCCCCCCCCCCCCCCccCCCceEEEEecC
Q 039692 201 QNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTISTN 280 (417)
Q Consensus 201 ~~~~~~~p~~~~~~v~~~~~~~~l~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~p~v~~~~~~ 280 (417)
......+..+..++.+..+|.++++.+.......... .-.....+
T Consensus 195 --------~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~v---------------------------~~~~~~~~ 239 (814)
T 3mkq_A 195 --------LPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNV---------------------------SFAVFHPT 239 (814)
T ss_dssp --------STTCCEEEEECTTSEEEEEETTTTEEEEEEECCSSCE---------------------------EEEEECSS
T ss_pred --------CCCCCEEEEEeCCCEEEEEECCCCcEEEEEcCCCCCE---------------------------EEEEEcCC
Confidence 1122334556678899999999999888776432211 01111223
Q ss_pred CeeeeEEEEEcccceEEEEECCCCcEEEEeecCCCCCCCcceeccc--ccCCe-EEEEeccCCceeeeec
Q 039692 281 GRFRDVVVAVQKSGFAWAFDRDSGDIIWFKLAGPGGREGGGVWGAA--TDGRR-VYTNIVNNDRIIWSTA 347 (417)
Q Consensus 281 G~~~~~v~~~~~~G~l~ald~~tG~~lW~~~~~~~~~~g~~~~~~~--~~~~~-vy~~~~~~~~~~W~~~ 347 (417)
+..++.++.+|.++..|..+++.++...... .....++ .++.. +++...+++-.+|+..
T Consensus 240 ---~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~-----~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (814)
T 3mkq_A 240 ---LPIIISGSEDGTLKIWNSSTYKVEKTLNVGL-----ERSWCIATHPTGRKNYIASGFDNGFTVLSLG 301 (814)
T ss_dssp ---SSEEEEEETTSCEEEEETTTCSEEEEECCSS-----SSEEEEEECTTCGGGEEEEEETTEEEEEECS
T ss_pred ---CCEEEEEeCCCeEEEEECCCCcEEEEeecCC-----CcEEEEEEccCCCceEEEEEeCCCEEEEEcC
Confidence 3578888899999999999999999887531 1222222 23333 3555555556666654
No 84
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=97.49 E-value=0.012 Score=55.98 Aligned_cols=267 Identities=7% Similarity=-0.055 Sum_probs=136.6
Q ss_pred CEEEEeccCCcEEEEECCCCccceEeecccc---------cCCcce-e----------eEEeeeeeEEEEEecCCCceee
Q 039692 49 GVVYFPSWNGYLYAVNAFNGALIWEQNLSKL---------TGLSGT-G----------IVVNVTVAVVVAVSRSNGELVW 108 (417)
Q Consensus 49 g~v~v~~~~g~l~ald~~tG~~~W~~~~~~~---------~~~~p~-~----------~v~~~~v~~l~ald~~tG~~~W 108 (417)
..++.++.+|.|..+|.++++.......... ....++ . ++..+..+.+..+|..+++...
T Consensus 57 ~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~ 136 (408)
T 4a11_B 57 RYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQTAD 136 (408)
T ss_dssp CEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEEEETTSEEEEEETTTTEEEE
T ss_pred CEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEEEEeCCCeEEEeeCCCCccce
Confidence 4677777899999999999988776652210 000111 0 1111123889999999999988
Q ss_pred eeecCCCCCcceeeceeEEcC-eEEEEeCCccCccccCcccCCCceEEEEeCCCCceeceeeecCCCCCCCCCCCCcccc
Q 039692 109 STQIDPRPRSQITMSGSVYMG-AFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYSGAAVW 187 (417)
Q Consensus 109 ~~~~~~~~~~~~~~sp~v~~~-~v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~~gg~~~ 187 (417)
........ ..+...|.-.++ .++++.. ++.|..+|.++++.+..+...... +.
T Consensus 137 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~--------------~~~v~~~d~~~~~~~~~~~~~~~~-----------v~ 190 (408)
T 4a11_B 137 VFNFEETV-YSHHMSPVSTKHCLVAVGTR--------------GPKVQLCDLKSGSCSHILQGHRQE-----------IL 190 (408)
T ss_dssp EEECSSCE-EEEEECSSCSSCCEEEEEES--------------SSSEEEEESSSSCCCEEECCCCSC-----------EE
T ss_pred eccCCCce-eeeEeecCCCCCcEEEEEcC--------------CCeEEEEeCCCcceeeeecCCCCc-----------EE
Confidence 88754321 112222221122 4555554 589999999999887765531110 00
Q ss_pred CCCceeecccCcccCCCCCCCCCCCCcccCCCCCCeEEEEECCCCce-EEEecCCCCcceeeeccCCCCCCCCCCCCCCC
Q 039692 188 GSSPAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRI-AWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDA 266 (417)
Q Consensus 188 ~~~pa~d~~~~~~~~~~~~~p~~~~~~v~~~~~~~~l~ald~~tG~~-~W~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~ 266 (417)
..++.+... ..+..+..++.+..+|.++++. +........... .... ...
T Consensus 191 --~~~~~~~~~--------------~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~----------~~~~---~~~ 241 (408)
T 4a11_B 191 --AVSWSPRYD--------------YILATASADSRVKLWDVRRASGCLITLDQHNGKKS----------QAVE---SAN 241 (408)
T ss_dssp --EEEECSSCT--------------TEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSC----------CCTT---TSS
T ss_pred --EEEECCCCC--------------cEEEEEcCCCcEEEEECCCCCcccccccccccccc----------eeec---ccc
Confidence 112222110 1133455677888888887762 222221110000 0000 000
Q ss_pred ccCCCceE-EEEecCCeeeeEEEEEcccceEEEEECCCCcEEEEeecCCC--CC---------CCcceecccccCCeEEE
Q 039692 267 DFGEAPML-LTISTNGRFRDVVVAVQKSGFAWAFDRDSGDIIWFKLAGPG--GR---------EGGGVWGAATDGRRVYT 334 (417)
Q Consensus 267 ~~~~~p~v-~~~~~~G~~~~~v~~~~~~G~l~ald~~tG~~lW~~~~~~~--~~---------~g~~~~~~~~~~~~vy~ 334 (417)
.....++. .....+ ++.++.++.+|.++..|..+++.+........ .. ........+..++.+++
T Consensus 242 ~~~~~~v~~~~~~~~---~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v 318 (408)
T 4a11_B 242 TAHNGKVNGLCFTSD---GLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAV 318 (408)
T ss_dssp CSCSSCEEEEEECTT---SSEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEE
T ss_pred ccccCceeEEEEcCC---CCEEEEecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEE
Confidence 00112221 122233 35788888999999999999987554332100 00 00111122345667777
Q ss_pred EeccCCceeeeecCCCCCCCccceeeeCCeEEeccCCCC
Q 039692 335 NIVNNDRIIWSTADPSNETAHGPVTVVNGVLFAGSVSAN 373 (417)
Q Consensus 335 ~~~~~~~~~W~~~~~~~~~~~~p~~~~~~~v~~~~~~g~ 373 (417)
.+...++.+............--....+.++++++.+|.
T Consensus 319 ~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~ 357 (408)
T 4a11_B 319 YTVYSGEQITMLKGHYKTVDCCVFQSNFQELYSGSRDCN 357 (408)
T ss_dssp EETTTCCEEEEECCCSSCEEEEEEETTTTEEEEEETTSC
T ss_pred EECcCCcceeeeccCCCeEEEEEEcCCCCEEEEECCCCe
Confidence 777777776666533211111111123456777776665
No 85
>2zuy_A YESX protein; beta-propeller, lyase; 1.65A {Bacillus subtilis}
Probab=97.47 E-value=0.02 Score=57.91 Aligned_cols=93 Identities=18% Similarity=0.287 Sum_probs=61.2
Q ss_pred cCccccccceeeeEEEeCCcee-----eCcEEEC----C--EEEEeccCC----------------------------cE
Q 039692 20 INPVTVRNLRLRWSFYAGKDIS-----ATPAVAN----G--VVYFPSWNG----------------------------YL 60 (417)
Q Consensus 20 i~~~~~~~~~~~W~~~~~~~~~-----~~p~~~~----g--~v~v~~~~g----------------------------~l 60 (417)
|.+.+. +++.+|+..++..+. .++.+.| | -|++.+.+| .|
T Consensus 157 l~aY~l-dG~~LW~idlg~Ni~aGahyt~~~V~DlDGDGkaEIvv~TadGt~dg~g~vigd~~~dyr~~~g~il~G~eyL 235 (620)
T 2zuy_A 157 IDAYKL-DGTFLWRINLGRNIRAGAHYTQFMVYDLDGDGKAEIAMKTADGTTDGKGHIIGDEQADFRNEQGRILSGPEYL 235 (620)
T ss_dssp EEEECT-TSCEEEEEECCTTSCCSTTSCCCEEECSSSSSSCEEEEEECTTCBCTTSCBCSCTTCCCBCTTSCBCSSCCEE
T ss_pred EEEEEC-CCCEEEEEcCCCCcccccccCceeEEEcCCCCcceEEEEccCCcccCcceeecccccccccccceEecCCeEE
Confidence 666765 499999999865442 3555542 2 466665443 47
Q ss_pred EEEECCCCccceEeecccccC-------------------------CcceeeEEeeee--eEEEEEecCCC--ceeeeee
Q 039692 61 YAVNAFNGALIWEQNLSKLTG-------------------------LSGTGIVVNVTV--AVVVAVSRSNG--ELVWSTQ 111 (417)
Q Consensus 61 ~ald~~tG~~~W~~~~~~~~~-------------------------~~p~~~v~~~~v--~~l~ald~~tG--~~~W~~~ 111 (417)
..||-+||+.+++.+...... ..|..+..++++ ..|.|+|.++| +++|++.
T Consensus 236 ~vfdG~TG~~l~t~~~~p~rg~~~~WGD~yGnR~drf~~~vayLDG~~Ps~v~~rG~Ytr~~v~A~d~~~g~L~~~W~~d 315 (620)
T 2zuy_A 236 TVFKGETGEALTTVEYEPPRGKLEDWGDGYGNRMDRFLAGTAYLDGERPSLVMARGYYTRTVLVAYDFRNGRLKKRWVFD 315 (620)
T ss_dssp EEEETTTCCEEEEEECSSCCCSGGGGTSSSSTTTTCEEEEEECTTCC-CEEEEEECSSSSCEEEEEEEETTEEEEEEEEE
T ss_pred EEEcCCCcceeeecccCCCcCccccccccccccccccceeEEecCCCCceEEEecCcccceeEEEEEccCCceeeeeEec
Confidence 999999999999988732110 012223344443 67999999888 4799998
Q ss_pred cC
Q 039692 112 ID 113 (417)
Q Consensus 112 ~~ 113 (417)
..
T Consensus 316 s~ 317 (620)
T 2zuy_A 316 SN 317 (620)
T ss_dssp TT
T ss_pred CC
Confidence 64
No 86
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=97.46 E-value=0.009 Score=58.08 Aligned_cols=235 Identities=11% Similarity=0.072 Sum_probs=122.7
Q ss_pred cCccccccceeeeEEEeCCc-------eeeCcEEE--CCEEEEecc--CCcEEEEECCCCccceEeecccccCCcceee-
Q 039692 20 INPVTVRNLRLRWSFYAGKD-------ISATPAVA--NGVVYFPSW--NGYLYAVNAFNGALIWEQNLSKLTGLSGTGI- 87 (417)
Q Consensus 20 i~~~~~~~~~~~W~~~~~~~-------~~~~p~~~--~g~v~v~~~--~g~l~ald~~tG~~~W~~~~~~~~~~~p~~~- 87 (417)
|...+..++++.=+..++.. -.....+. +.++|+++. ++.|..||.++++++-+.++++.....|.+.
T Consensus 111 VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~g~~~~~P~g~~ 190 (386)
T 3sjl_D 111 VEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPDCYHIFPTAPD 190 (386)
T ss_dssp EEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSEEEEEEEETT
T ss_pred EEEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECCCcceeecCCCc
Confidence 44555666777666666531 11112333 447999874 5889999999999998888764211112210
Q ss_pred --EEeeeeeEEEEEecCC-Cceeeeee--cCCCCCcceeeceeE--EcCeEEEEeCCccCccccCcccCCCceEEEEeCC
Q 039692 88 --VVNVTVAVVVAVSRSN-GELVWSTQ--IDPRPRSQITMSGSV--YMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVR 160 (417)
Q Consensus 88 --v~~~~v~~l~ald~~t-G~~~W~~~--~~~~~~~~~~~sp~v--~~~~v~v~~~~~~~~~~~~~~~~~~g~l~ald~~ 160 (417)
+...-.|++.-++..+ |++.=+.. +... ...+...|.. .++++++.+. ++.++.+|..
T Consensus 191 ~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~-~~~~~~~~~~~~~dG~~~~vs~--------------~g~V~v~d~~ 255 (386)
T 3sjl_D 191 TFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPE-DEFLINHPAYSQKAGRLVWPTY--------------TGKIHQIDLS 255 (386)
T ss_dssp EEEEEETTSCEEEEECCSSSCCEEEECCCCSCT-TSCBCSCCEEETTTTEEEEEBT--------------TSEEEEEECT
T ss_pred eeEEECCCCCEEEEECCCCCeEEEeecceeccc-cccccccceeEcCCCcEEEEeC--------------CCEEEEEECC
Confidence 1111127777888765 77631111 1100 1122222332 2676655444 4899999998
Q ss_pred CCcee----ceeeec---CCCCCCCCCCCCccccCCCceeecccCcccCCCCCCCCCCCCcccCC-CCCCeEEEEECCCC
Q 039692 161 NGRII----WQTYML---PDNGGKRGGYSGAAVWGSSPAIDVIRRQKQNNQTTKPTHPDQCISSD-IYANSIVALDIDSG 232 (417)
Q Consensus 161 tG~~~----W~~~~~---~~~~~~~~~~~gg~~~~~~pa~d~~~~~~~~~~~~~p~~~~~~v~~~-~~~~~l~ald~~tG 232 (417)
+++.. |..... .... .+ ++ + ...++++.....+... .+..-... ...+.|..||.+|+
T Consensus 256 ~~~~~v~~~~~~~~~~~~~~g~-~p----~g--~-q~~a~~~~~~~lyV~~------~~~~~~~hk~~~~~V~viD~~t~ 321 (386)
T 3sjl_D 256 SGDAKFLPAVEALTEAERADGW-RP----GG--W-QQVAYHRALDRIYLLV------DQRDEWRHKTASRFVVVLDAKTG 321 (386)
T ss_dssp TSSCEECCCEESSCHHHHHTTE-EE----CS--S-SCEEEETTTTEEEEEE------EECCTTCTTSCEEEEEEEETTTC
T ss_pred CCcceeecceeccccccccccc-cC----CC--c-ceeeECCCCCeEEEEe------ccccccccCCCCCEEEEEECCCC
Confidence 66532 221000 0000 00 00 0 0123443322110000 00000000 12468999999999
Q ss_pred ceEEEecCCCCcceeeeccCCCCCCCCCCCCCCCccCCCceEEEEecCCeeeeEEEEEc-ccceEEEEECCCCcEEEEee
Q 039692 233 RIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQ-KSGFAWAFDRDSGDIIWFKL 311 (417)
Q Consensus 233 ~~~W~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~p~v~~~~~~G~~~~~v~~~~-~~G~l~ald~~tG~~lW~~~ 311 (417)
+++=+.+.+.. .| -..+..+| +..+|+.+ .++.|.++|+.+|+++=+.+
T Consensus 322 kv~~~i~vg~~-~~---------------------------~lavs~D~--~~~ly~tn~~~~~VsViD~~t~k~~~~i~ 371 (386)
T 3sjl_D 322 ERLAKFEMGHE-ID---------------------------SINVSQDE--KPLLYALSTGDKTLYIHDAESGEELRSVN 371 (386)
T ss_dssp CEEEEEEEEEE-EC---------------------------EEEECSSS--SCEEEEEETTTTEEEEEETTTCCEEEEEC
T ss_pred eEEEEEECCCC-cc---------------------------eEEECCCC--CeEEEEEcCCCCeEEEEECCCCcEEEEec
Confidence 99887776531 11 11223344 24677764 47899999999999998887
Q ss_pred cC
Q 039692 312 AG 313 (417)
Q Consensus 312 ~~ 313 (417)
.+
T Consensus 372 ~~ 373 (386)
T 3sjl_D 372 QL 373 (386)
T ss_dssp CC
T ss_pred CC
Confidence 64
No 87
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=97.46 E-value=0.013 Score=60.13 Aligned_cols=108 Identities=13% Similarity=-0.059 Sum_probs=72.6
Q ss_pred CCEEEEec-cCCcEEEEECCCCccceEeecccccC---Cccee--eEEeeeeeEEEEEecC--CCceeeeeecCCCCCcc
Q 039692 48 NGVVYFPS-WNGYLYAVNAFNGALIWEQNLSKLTG---LSGTG--IVVNVTVAVVVAVSRS--NGELVWSTQIDPRPRSQ 119 (417)
Q Consensus 48 ~g~v~v~~-~~g~l~ald~~tG~~~W~~~~~~~~~---~~p~~--~v~~~~v~~l~ald~~--tG~~~W~~~~~~~~~~~ 119 (417)
++.+|+.. .++.|..||.+|++++.++..+.... .+|-+ ++.....+.|+.+|.. +++++-+.+....+..
T Consensus 166 ~~~~~V~~~~~~~V~viD~~t~~v~~~i~~g~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G~~P~~- 244 (567)
T 1qks_A 166 ENLFSVTLRDAGQIALIDGSTYEIKTVLDTGYAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGSEARS- 244 (567)
T ss_dssp GGEEEEEETTTTEEEEEETTTCCEEEEEECSSCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCSEEEE-
T ss_pred CceEEEEeCCCCeEEEEECCCCeEEEEEeCCCCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEecCCCCce-
Confidence 45777776 46899999999999999998774311 12211 0101112789999995 9999988876533211
Q ss_pred eeec----eeEEcCeEEEEeCCccCccccCcccCCCceEEEEeCCCCceeceeeec
Q 039692 120 ITMS----GSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYML 171 (417)
Q Consensus 120 ~~~s----p~v~~~~v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~~~W~~~~~ 171 (417)
+..+ | .+..+|+.... .+.+..+|..|.+++.++.+.
T Consensus 245 ia~s~~~~p--DGk~l~v~n~~-------------~~~v~ViD~~t~~~~~~i~~~ 285 (567)
T 1qks_A 245 IETSKMEGW--EDKYAIAGAYW-------------PPQYVIMDGETLEPKKIQSTR 285 (567)
T ss_dssp EEECCSTTC--TTTEEEEEEEE-------------TTEEEEEETTTCCEEEEEECC
T ss_pred eEEccccCC--CCCEEEEEEcc-------------CCeEEEEECCCCcEEEEEecc
Confidence 2222 2 13468887653 588999999999999988763
No 88
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=97.46 E-value=0.029 Score=54.47 Aligned_cols=241 Identities=8% Similarity=-0.005 Sum_probs=121.9
Q ss_pred CCEEEEeccCCcEEEEECCCCccceEeeccc-cc---CCccee--eEEeeeeeEEEEEecCCCceeeeeecCCCCCccee
Q 039692 48 NGVVYFPSWNGYLYAVNAFNGALIWEQNLSK-LT---GLSGTG--IVVNVTVAVVVAVSRSNGELVWSTQIDPRPRSQIT 121 (417)
Q Consensus 48 ~g~v~v~~~~g~l~ald~~tG~~~W~~~~~~-~~---~~~p~~--~v~~~~v~~l~ald~~tG~~~W~~~~~~~~~~~~~ 121 (417)
+..++.++.++.|..+|..+|+.+-.+.... .+ ..+|.+ ++..+..+.+..+|..+++.+-++.........+.
T Consensus 120 ~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~V~~v~ 199 (410)
T 1vyh_C 120 FSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVS 199 (410)
T ss_dssp SSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTSSCEEECCCCCSSCEEEEE
T ss_pred CCEEEEEeCCCeEEEEECCCCcEEEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEcCCCCCEEEEE
Confidence 3467777889999999999998876655332 11 111111 11122237777788877777655442211111122
Q ss_pred eceeEEcCeEEEEeCCccCccccCcccCCCceEEEEeCCCCceeceeeecCCCCCCCCCCCCccccCCCceeecccCccc
Q 039692 122 MSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYSGAAVWGSSPAIDVIRRQKQ 201 (417)
Q Consensus 122 ~sp~v~~~~v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~~gg~~~~~~pa~d~~~~~~~ 201 (417)
..| .+..++.++. ++.|..+|.++|+.+-++...... + ....+.+
T Consensus 200 ~~p--~~~~l~s~s~--------------D~~i~~wd~~~~~~~~~~~~h~~~-----------v--~~~~~~~------ 244 (410)
T 1vyh_C 200 IMP--NGDHIVSASR--------------DKTIKMWEVQTGYCVKTFTGHREW-----------V--RMVRPNQ------ 244 (410)
T ss_dssp ECS--SSSEEEEEET--------------TSEEEEEETTTCCEEEEEECCSSC-----------E--EEEEECT------
T ss_pred EeC--CCCEEEEEeC--------------CCeEEEEECCCCcEEEEEeCCCcc-----------E--EEEEECC------
Confidence 222 1334555554 689999999999877555431100 0 0011111
Q ss_pred CCCCCCCCCCCCcccCCCCCCeEEEEECCCCceEEEecCCCCcceeeeccCCCCCCCCCCCCCCCccCCCceEEEEecCC
Q 039692 202 NNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTISTNG 281 (417)
Q Consensus 202 ~~~~~~p~~~~~~v~~~~~~~~l~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~p~v~~~~~~G 281 (417)
....+..+..++.+..+|..+++.+-.+.........+.- .|.... ............ ..+
T Consensus 245 ---------~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~h~~~v~~~~~----~~~~~~---~~~~~~~~~~~~---~~~ 305 (410)
T 1vyh_C 245 ---------DGTLIASCSNDQTVRVWVVATKECKAELREHRHVVECISW----APESSY---SSISEATGSETK---KSG 305 (410)
T ss_dssp ---------TSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEE----CCSCGG---GGGGGCCSCC--------
T ss_pred ---------CCCEEEEEcCCCeEEEEECCCCceeeEecCCCceEEEEEE----cCcccc---cchhhhcccccc---ccC
Confidence 1122345566788999999988876655433221110000 000000 000000000000 001
Q ss_pred eeeeEEEEEcccceEEEEECCCCcEEEEeecCCCCCCCcceeccc--ccCCeEEEEeccCCceeeeec
Q 039692 282 RFRDVVVAVQKSGFAWAFDRDSGDIIWFKLAGPGGREGGGVWGAA--TDGRRVYTNIVNNDRIIWSTA 347 (417)
Q Consensus 282 ~~~~~v~~~~~~G~l~ald~~tG~~lW~~~~~~~~~~g~~~~~~~--~~~~~vy~~~~~~~~~~W~~~ 347 (417)
..+..++.++.|+.+...|..+|+.+-....-. .....++ .++..++....++.-.+|...
T Consensus 306 ~~g~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~-----~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~ 368 (410)
T 1vyh_C 306 KPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHD-----NWVRGVLFHSGGKFILSCADDKTLRVWDYK 368 (410)
T ss_dssp --CCEEEEEETTSEEEEEETTTTEEEEEEECCS-----SCEEEEEECSSSSCEEEEETTTEEEEECCT
T ss_pred CCCCEEEEEeCCCeEEEEECCCCceEEEEECCC-----CcEEEEEEcCCCCEEEEEeCCCeEEEEECC
Confidence 124578888999999999999999887665311 1111222 234455555544445667654
No 89
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=97.43 E-value=0.029 Score=51.92 Aligned_cols=226 Identities=10% Similarity=0.025 Sum_probs=123.3
Q ss_pred CCEEEEeccCCcEEEEECCCCccceEeecccc-cC---Cccee--eEEeeeeeEEEEEecCCCceeeeeecCCCCCccee
Q 039692 48 NGVVYFPSWNGYLYAVNAFNGALIWEQNLSKL-TG---LSGTG--IVVNVTVAVVVAVSRSNGELVWSTQIDPRPRSQIT 121 (417)
Q Consensus 48 ~g~v~v~~~~g~l~ald~~tG~~~W~~~~~~~-~~---~~p~~--~v~~~~v~~l~ald~~tG~~~W~~~~~~~~~~~~~ 121 (417)
+..|+.++.++.+...|.++++.+-.+..... +. .+|.+ ++.....+.+..+|..+|+.+.+++........+.
T Consensus 25 ~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~ 104 (304)
T 2ynn_A 25 EPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIA 104 (304)
T ss_dssp SSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEE
T ss_pred CCEEEEEcCCCcEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEECCCCEEEEEECCCCcEEEEEeCCCCcEEEEE
Confidence 44677778899999999999998777665431 11 01110 11111238899999999999887764322212233
Q ss_pred eceeEEcCeEEEEeCCccCccccCcccCCCceEEEEeCCCCceeceeeecCCCCCCCCCCCCccccCCCceeecccCccc
Q 039692 122 MSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYSGAAVWGSSPAIDVIRRQKQ 201 (417)
Q Consensus 122 ~sp~v~~~~v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~~gg~~~~~~pa~d~~~~~~~ 201 (417)
.+| .+..++.++. ++.|...|.+++...-+.-. ... ..+. ..++.+..
T Consensus 105 ~~~--~~~~l~sgs~--------------D~~v~lWd~~~~~~~~~~~~-~h~---------~~v~--~v~~~p~~---- 152 (304)
T 2ynn_A 105 VHP--TKPYVLSGSD--------------DLTVKLWNWENNWALEQTFE-GHE---------HFVM--CVAFNPKD---- 152 (304)
T ss_dssp ECS--SSSEEEEEET--------------TSCEEEEEGGGTTEEEEEEC-CCC---------SCEE--EEEECTTC----
T ss_pred EcC--CCCEEEEECC--------------CCeEEEEECCCCcchhhhhc-ccC---------CcEE--EEEECCCC----
Confidence 333 1233444544 68999999887754322111 100 0000 11222210
Q ss_pred CCCCCCCCCCCCcccCCCCCCeEEEEECCCCceEEEecCCCCcceeeeccCCCCCCCCCCCCCCCccCCCceEEEEecCC
Q 039692 202 NNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTISTNG 281 (417)
Q Consensus 202 ~~~~~~p~~~~~~v~~~~~~~~l~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~p~v~~~~~~G 281 (417)
...+..+..++.+...|..+++............ ..........
T Consensus 153 ----------~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~--------------------------v~~~~~~~~~ 196 (304)
T 2ynn_A 153 ----------PSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERG--------------------------VNYVDYYPLP 196 (304)
T ss_dssp ----------TTEEEEEETTSEEEEEETTCSSCSEEEECCCTTC--------------------------EEEEEECCST
T ss_pred ----------CCEEEEEeCCCeEEEEECCCCCccceeccCCcCc--------------------------EEEEEEEEcC
Confidence 1223455677888889988877665554332110 0111111111
Q ss_pred eeeeEEEEEcccceEEEEECCCCcEEEEeecCCCCCCCcceeccc--ccCCeEEEEeccCCceeeeec
Q 039692 282 RFRDVVVAVQKSGFAWAFDRDSGDIIWFKLAGPGGREGGGVWGAA--TDGRRVYTNIVNNDRIIWSTA 347 (417)
Q Consensus 282 ~~~~~v~~~~~~G~l~ald~~tG~~lW~~~~~~~~~~g~~~~~~~--~~~~~vy~~~~~~~~~~W~~~ 347 (417)
. +..++.++.|+.+...|.++++.+-....- ... ....+ .++..+.....++.-.+|...
T Consensus 197 ~-~~~l~s~s~D~~i~iWd~~~~~~~~~~~~h----~~~-v~~~~~~p~~~~l~s~s~Dg~i~iWd~~ 258 (304)
T 2ynn_A 197 D-KPYMITASDDLTIKIWDYQTKSCVATLEGH----MSN-VSFAVFHPTLPIIISGSEDGTLKIWNSS 258 (304)
T ss_dssp T-CCEEEEEETTSEEEEEETTTTEEEEEEECC----SSC-EEEEEECSSSSEEEEEETTSCEEEEETT
T ss_pred C-CCEEEEEcCCCeEEEEeCCCCccceeeCCC----CCC-EEEEEECCCCCEEEEEcCCCeEEEEECC
Confidence 1 357888899999999999999988776631 111 11122 233444444445455667654
No 90
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=97.40 E-value=0.05 Score=55.70 Aligned_cols=89 Identities=8% Similarity=0.074 Sum_probs=63.9
Q ss_pred cCccccccceeeeEEEeCCceeeCcEEE--CCEEEEeccCCcEEEEECC--CCccceEeecccccCCcceee-EE-----
Q 039692 20 INPVTVRNLRLRWSFYAGKDISATPAVA--NGVVYFPSWNGYLYAVNAF--NGALIWEQNLSKLTGLSGTGI-VV----- 89 (417)
Q Consensus 20 i~~~~~~~~~~~W~~~~~~~~~~~p~~~--~g~v~v~~~~g~l~ald~~--tG~~~W~~~~~~~~~~~p~~~-v~----- 89 (417)
|...+..+++++.+..++.... ..++. +..+|+++.++.|..||.. +++++-+...+.. |.++ +.
T Consensus 179 V~viD~~t~~v~~~i~~g~~p~-~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G~~----P~~ia~s~~~~p 253 (567)
T 1qks_A 179 IALIDGSTYEIKTVLDTGYAVH-ISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGSE----ARSIETSKMEGW 253 (567)
T ss_dssp EEEEETTTCCEEEEEECSSCEE-EEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCSE----EEEEEECCSTTC
T ss_pred EEEEECCCCeEEEEEeCCCCcc-ceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEecCCC----CceeEEccccCC
Confidence 5566677888888888776543 23333 4479999999999999996 8999888877532 2222 22
Q ss_pred ee---e-----eeEEEEEecCCCceeeeeecC
Q 039692 90 NV---T-----VAVVVAVSRSNGELVWSTQID 113 (417)
Q Consensus 90 ~~---~-----v~~l~ald~~tG~~~W~~~~~ 113 (417)
++ + -+.+..+|..|.+++.++.+.
T Consensus 254 DGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~ 285 (567)
T 1qks_A 254 EDKYAIAGAYWPPQYVIMDGETLEPKKIQSTR 285 (567)
T ss_dssp TTTEEEEEEEETTEEEEEETTTCCEEEEEECC
T ss_pred CCCEEEEEEccCCeEEEEECCCCcEEEEEecc
Confidence 22 1 188899999999999998864
No 91
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=97.37 E-value=0.022 Score=54.96 Aligned_cols=191 Identities=11% Similarity=0.067 Sum_probs=99.4
Q ss_pred CCEEEEeccCCcEEEEECCCCccceEeecccccC----------------------Cccee--eEEeeeeeEEEEEecCC
Q 039692 48 NGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG----------------------LSGTG--IVVNVTVAVVVAVSRSN 103 (417)
Q Consensus 48 ~g~v~v~~~~g~l~ald~~tG~~~W~~~~~~~~~----------------------~~p~~--~v~~~~v~~l~ald~~t 103 (417)
++..++...++.+..+|..+|+.+.++....... .+|.+ ++.....+.+..+|.++
T Consensus 75 dg~~la~g~~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~s~~~d~~i~iwd~~~ 154 (393)
T 1erj_A 75 DGEYLATGCNKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLATGAEDRLIRIWDIEN 154 (393)
T ss_dssp TSSEEEEECBSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSSEEEEEETTSCEEEEETTT
T ss_pred CCCEEEEEcCCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCCCCEEEEEcCCCeEEEEECCC
Confidence 4554545556789999999999877664332100 00100 01111127888888888
Q ss_pred CceeeeeecCCCCCcceeeceeEEcCeEEEEeCCccCccccCcccCCCceEEEEeCCCCceeceeeecCCCCCCCCCCCC
Q 039692 104 GELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYSG 183 (417)
Q Consensus 104 G~~~W~~~~~~~~~~~~~~sp~v~~~~v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~~g 183 (417)
++.+-...........+..+| .+..++.+.. ++.+...|.++|+....+.....
T Consensus 155 ~~~~~~~~~h~~~v~~~~~~p--~~~~l~s~s~--------------d~~v~iwd~~~~~~~~~~~~~~~---------- 208 (393)
T 1erj_A 155 RKIVMILQGHEQDIYSLDYFP--SGDKLVSGSG--------------DRTVRIWDLRTGQCSLTLSIEDG---------- 208 (393)
T ss_dssp TEEEEEECCCSSCEEEEEECT--TSSEEEEEET--------------TSEEEEEETTTTEEEEEEECSSC----------
T ss_pred CcEEEEEccCCCCEEEEEEcC--CCCEEEEecC--------------CCcEEEEECCCCeeEEEEEcCCC----------
Confidence 887655542211111122223 1334555544 68999999999998776654210
Q ss_pred ccccCCCceeecccCcccCCCCCCCCCCCCcccCCCCCCeEEEEECCCCceEEEecCCCCcceeeeccCCCCCCCCCCCC
Q 039692 184 AAVWGSSPAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPN 263 (417)
Q Consensus 184 g~~~~~~pa~d~~~~~~~~~~~~~p~~~~~~v~~~~~~~~l~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~c~~~~~ 263 (417)
+ ...++.+. ....+..+..++.+..+|.++|+.+-+.........
T Consensus 209 --v--~~~~~~~~--------------~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~----------------- 253 (393)
T 1erj_A 209 --V--TTVAVSPG--------------DGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGT----------------- 253 (393)
T ss_dssp --E--EEEEECST--------------TCCEEEEEETTSCEEEEETTTCCEEEEEC------C-----------------
T ss_pred --c--EEEEEECC--------------CCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCC-----------------
Confidence 0 01122211 112344556788899999999988766543211000
Q ss_pred CCCccCCCceE-EEEecCCeeeeEEEEEcccceEEEEECCCCcE
Q 039692 264 LDADFGEAPML-LTISTNGRFRDVVVAVQKSGFAWAFDRDSGDI 306 (417)
Q Consensus 264 ~~~~~~~~p~v-~~~~~~G~~~~~v~~~~~~G~l~ald~~tG~~ 306 (417)
....++. .....+| +.|+.++.||.+...|..+++.
T Consensus 254 ----~h~~~v~~v~~~~~g---~~l~s~s~d~~v~~wd~~~~~~ 290 (393)
T 1erj_A 254 ----GHKDSVYSVVFTRDG---QSVVSGSLDRSVKLWNLQNANN 290 (393)
T ss_dssp ----CCSSCEEEEEECTTS---SEEEEEETTSEEEEEEC-----
T ss_pred ----CCCCCEEEEEECCCC---CEEEEEeCCCEEEEEECCCCCC
Confidence 0011111 1222333 5788888999999999887644
No 92
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=97.33 E-value=0.027 Score=59.40 Aligned_cols=195 Identities=10% Similarity=0.013 Sum_probs=114.1
Q ss_pred CCEEEEeccCCcEEEEECCCCccceEeecccc-cC---Cccee--eEEeeeeeEEEEEecCCCceeeeeecCCCCCccee
Q 039692 48 NGVVYFPSWNGYLYAVNAFNGALIWEQNLSKL-TG---LSGTG--IVVNVTVAVVVAVSRSNGELVWSTQIDPRPRSQIT 121 (417)
Q Consensus 48 ~g~v~v~~~~g~l~ald~~tG~~~W~~~~~~~-~~---~~p~~--~v~~~~v~~l~ald~~tG~~~W~~~~~~~~~~~~~ 121 (417)
+..+++++.+|.|..+|.++|+.+.++..... +. .+|.+ ++..+..+.++.+|..+|+.+.+..........+.
T Consensus 25 ~~~la~~~~~g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~ 104 (814)
T 3mkq_A 25 EPWVLTTLYSGRVEIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIA 104 (814)
T ss_dssp SSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEE
T ss_pred CCEEEEEeCCCEEEEEECCCCceEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEecCCCCEEEEE
Confidence 45677888899999999999998888774421 11 11211 11112238999999999999888774322211222
Q ss_pred eceeEEcC-eEEEEeCCccCccccCcccCCCceEEEEeCCCCceeceeeecCCCCCCCCCCCCccccCCCceeecccCcc
Q 039692 122 MSGSVYMG-AFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYSGAAVWGSSPAIDVIRRQK 200 (417)
Q Consensus 122 ~sp~v~~~-~v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~~gg~~~~~~pa~d~~~~~~ 200 (417)
.+| ++ .++++.. ++.|..+|.+++...-+.-. ... ..+ ...++.+..
T Consensus 105 ~s~---~~~~l~~~~~--------------dg~i~vw~~~~~~~~~~~~~-~~~---------~~v--~~~~~~p~~--- 152 (814)
T 3mkq_A 105 VHP---TKPYVLSGSD--------------DLTVKLWNWENNWALEQTFE-GHE---------HFV--MCVAFNPKD--- 152 (814)
T ss_dssp ECS---SSSEEEEEET--------------TSEEEEEEGGGTSEEEEEEE-CCS---------SCE--EEEEEETTE---
T ss_pred EeC---CCCEEEEEcC--------------CCEEEEEECCCCceEEEEEc-CCC---------CcE--EEEEEEcCC---
Confidence 233 34 4555554 58999999987733322111 100 000 012333210
Q ss_pred cCCCCCCCCCCCCcccCCCCCCeEEEEECCCCceEEEecCCCCcceeeeccCCCCCCCCCCCCCCCccCCCceEEEEecC
Q 039692 201 QNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTISTN 280 (417)
Q Consensus 201 ~~~~~~~p~~~~~~v~~~~~~~~l~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~p~v~~~~~~ 280 (417)
...+..+..++.+..+|..+++............ .........
T Consensus 153 -----------~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~~--------------------------v~~~~~~~~ 195 (814)
T 3mkq_A 153 -----------PSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERG--------------------------VNYVDYYPL 195 (814)
T ss_dssp -----------EEEEEEEETTSEEEEEETTCSSCSEEEECCCTTC--------------------------CCEEEECCS
T ss_pred -----------CCEEEEEeCCCeEEEEECCCCcceeEEecCCCCC--------------------------EEEEEEEEC
Confidence 1123445567889999998888877766543110 011111110
Q ss_pred CeeeeEEEEEcccceEEEEECCCCcEEEEeec
Q 039692 281 GRFRDVVVAVQKSGFAWAFDRDSGDIIWFKLA 312 (417)
Q Consensus 281 G~~~~~v~~~~~~G~l~ald~~tG~~lW~~~~ 312 (417)
+ .+..++.++.+|.+...|..+++.+.....
T Consensus 196 ~-~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~ 226 (814)
T 3mkq_A 196 P-DKPYMITASDDLTIKIWDYQTKSCVATLEG 226 (814)
T ss_dssp T-TCCEEEEECTTSEEEEEETTTTEEEEEEEC
T ss_pred C-CCCEEEEEeCCCEEEEEECCCCcEEEEEcC
Confidence 0 145788899999999999999998887764
No 93
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=97.33 E-value=0.051 Score=51.68 Aligned_cols=69 Identities=10% Similarity=0.083 Sum_probs=48.8
Q ss_pred cccCCCCCCeEEEEECCCCceEEEecC---C---CCcceeeeccCCCCCCCCCCCCCCCccCCCceEEEEecCCeeeeEE
Q 039692 214 CISSDIYANSIVALDIDSGRIAWAKPL---G---GYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVV 287 (417)
Q Consensus 214 ~v~~~~~~~~l~ald~~tG~~~W~~~~---~---~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~p~v~~~~~~G~~~~~v 287 (417)
.+..+..++.+..+|.++++.+..+.. . ... ..-.....+ +..|
T Consensus 199 ~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~---------------------------i~~i~~~~~---~~~l 248 (397)
T 1sq9_A 199 LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNS---------------------------IRSVKFSPQ---GSLL 248 (397)
T ss_dssp EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCC---------------------------EEEEEECSS---TTEE
T ss_pred eEEEEeCCCcEEEEECCCCceeEEEeccccccccCCc---------------------------cceEEECCC---CCEE
Confidence 445567789999999999999988875 2 111 111112223 3577
Q ss_pred EEEccc---ceEEEEECCCCcEEEEeec
Q 039692 288 VAVQKS---GFAWAFDRDSGDIIWFKLA 312 (417)
Q Consensus 288 ~~~~~~---G~l~ald~~tG~~lW~~~~ 312 (417)
++++.+ |.++.+|..+++.+.....
T Consensus 249 ~~~~~d~~~g~i~i~d~~~~~~~~~~~~ 276 (397)
T 1sq9_A 249 AIAHDSNSFGCITLYETEFGERIGSLSV 276 (397)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEECB
T ss_pred EEEecCCCCceEEEEECCCCcccceecc
Confidence 888888 9999999999999887764
No 94
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=97.22 E-value=0.028 Score=51.26 Aligned_cols=187 Identities=13% Similarity=0.137 Sum_probs=108.4
Q ss_pred EECCEEEEeccCCcEEEEECCCCccceEeecccccC----Ccc-e--eeEEeeeeeEEEEEecCCCceeeeeecCCCCCc
Q 039692 46 VANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG----LSG-T--GIVVNVTVAVVVAVSRSNGELVWSTQIDPRPRS 118 (417)
Q Consensus 46 ~~~g~v~v~~~~g~l~ald~~tG~~~W~~~~~~~~~----~~p-~--~~v~~~~v~~l~ald~~tG~~~W~~~~~~~~~~ 118 (417)
..++.++.++.++.++.+| +++.+.......... ..| . -++.....+.++.+| .++..-....... .
T Consensus 112 ~~~~~l~~~~~d~~i~~~d--~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d--~~~~~~~~~~~~~--~ 185 (313)
T 3odt_A 112 FQDGVVISGSWDKTAKVWK--EGSLVYNLQAHNASVWDAKVVSFSENKFLTASADKTIKLWQ--NDKVIKTFSGIHN--D 185 (313)
T ss_dssp EETTEEEEEETTSEEEEEE--TTEEEEEEECCSSCEEEEEEEETTTTEEEEEETTSCEEEEE--TTEEEEEECSSCS--S
T ss_pred ecCCEEEEEeCCCCEEEEc--CCcEEEecccCCCceeEEEEccCCCCEEEEEECCCCEEEEe--cCceEEEEeccCc--c
Confidence 3577888888999999999 677777766543110 001 0 001111227777887 4444444443111 1
Q ss_pred ceeeceeEEcCeEEEEeCCccCccccCcccCCCceEEEEeCCCCceeceeeecCCCCCCCCCCCCccccCCCceeecccC
Q 039692 119 QITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYSGAAVWGSSPAIDVIRR 198 (417)
Q Consensus 119 ~~~~sp~v~~~~v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~~gg~~~~~~pa~d~~~~ 198 (417)
.+..--..-++.++++.. ++.|..+|.++++.+.++...... +. ..++.+
T Consensus 186 ~i~~~~~~~~~~~~~~~~--------------dg~i~i~d~~~~~~~~~~~~~~~~-----------i~--~~~~~~--- 235 (313)
T 3odt_A 186 VVRHLAVVDDGHFISCSN--------------DGLIKLVDMHTGDVLRTYEGHESF-----------VY--CIKLLP--- 235 (313)
T ss_dssp CEEEEEEEETTEEEEEET--------------TSEEEEEETTTCCEEEEEECCSSC-----------EE--EEEECT---
T ss_pred cEEEEEEcCCCeEEEccC--------------CCeEEEEECCchhhhhhhhcCCce-----------EE--EEEEec---
Confidence 122111123666666665 689999999999998887642110 10 112222
Q ss_pred cccCCCCCCCCCCCCcccCCCCCCeEEEEECCCCceEEEecCCCCcceeeeccCCCCCCCCCCCCCCCccCCCceEEEEe
Q 039692 199 QKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTIS 278 (417)
Q Consensus 199 ~~~~~~~~~p~~~~~~v~~~~~~~~l~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~p~v~~~~ 278 (417)
++.+..+..++.+..+|.++++.+..+........ -....
T Consensus 236 -------------~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~i~---------------------------~~~~~ 275 (313)
T 3odt_A 236 -------------NGDIVSCGEDRTVRIWSKENGSLKQVITLPAISIW---------------------------SVDCM 275 (313)
T ss_dssp -------------TSCEEEEETTSEEEEECTTTCCEEEEEECSSSCEE---------------------------EEEEC
T ss_pred -------------CCCEEEEecCCEEEEEECCCCceeEEEeccCceEE---------------------------EEEEc
Confidence 12345566789999999999999888765432211 11122
Q ss_pred cCCeeeeEEEEEcccceEEEEECCCCcEEEEeec
Q 039692 279 TNGRFRDVVVAVQKSGFAWAFDRDSGDIIWFKLA 312 (417)
Q Consensus 279 ~~G~~~~~v~~~~~~G~l~ald~~tG~~lW~~~~ 312 (417)
.+| . +++++.||.++..|.++++.+.+...
T Consensus 276 ~~~---~-~~~~~~dg~i~iw~~~~~~~~~~~~~ 305 (313)
T 3odt_A 276 SNG---D-IIVGSSDNLVRIFSQEKSRWASEDEI 305 (313)
T ss_dssp TTS---C-EEEEETTSCEEEEESCGGGCCC----
T ss_pred cCC---C-EEEEeCCCcEEEEeCCCCceeehhhh
Confidence 233 2 55688899999999998887766554
No 95
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=97.22 E-value=0.034 Score=52.88 Aligned_cols=203 Identities=9% Similarity=-0.013 Sum_probs=108.0
Q ss_pred CEEEEeccCCcEEEEECCCCcc-----ceEeecc------cccC---Cc----cee---eEEeeeeeEEEEEecCC----
Q 039692 49 GVVYFPSWNGYLYAVNAFNGAL-----IWEQNLS------KLTG---LS----GTG---IVVNVTVAVVVAVSRSN---- 103 (417)
Q Consensus 49 g~v~v~~~~g~l~ald~~tG~~-----~W~~~~~------~~~~---~~----p~~---~v~~~~v~~l~ald~~t---- 103 (417)
..++.++.++.|+.+|.++++. +-.+... ..+. .+ |.+ ++.....+.++.+|..+
T Consensus 82 ~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~ 161 (397)
T 1sq9_A 82 CLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADE 161 (397)
T ss_dssp EEEEEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSH
T ss_pred cEEEEEcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCccccc
Confidence 4666777899999999988886 5444433 1111 11 110 01111126777777776
Q ss_pred --Cceee-----eeec-------CCCCCcceeeceeEEcCeEEEEeCCccCccccCcccCCCceEEEEeCCCCceeceee
Q 039692 104 --GELVW-----STQI-------DPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTY 169 (417)
Q Consensus 104 --G~~~W-----~~~~-------~~~~~~~~~~sp~v~~~~v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~~~W~~~ 169 (417)
++.+- ++.. .......+..+| ++.++++.. ++.|..+|.++++.+.++.
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~---~~~l~~~~~--------------dg~i~i~d~~~~~~~~~~~ 224 (397)
T 1sq9_A 162 SNSLTLNWSPTLELQGTVESPMTPSQFATSVDISE---RGLIATGFN--------------NGTVQISELSTLRPLYNFE 224 (397)
T ss_dssp HHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECT---TSEEEEECT--------------TSEEEEEETTTTEEEEEEE
T ss_pred cccceeeccCcceeeeeeccccCCCCCceEEEECC---CceEEEEeC--------------CCcEEEEECCCCceeEEEe
Confidence 55544 3321 111111122222 344444443 6899999999999998877
Q ss_pred ecCCC---CCCCCCCCCccccCCCceeecccCcccCCCCCCCCCCCCcccCCCCC---CeEEEEECCCCceEEEecCCCC
Q 039692 170 MLPDN---GGKRGGYSGAAVWGSSPAIDVIRRQKQNNQTTKPTHPDQCISSDIYA---NSIVALDIDSGRIAWAKPLGGY 243 (417)
Q Consensus 170 ~~~~~---~~~~~~~~gg~~~~~~pa~d~~~~~~~~~~~~~p~~~~~~v~~~~~~---~~l~ald~~tG~~~W~~~~~~~ 243 (417)
..... .. .+. ..++.+. ...+..+..+ +.+..+|.++++.+..+.....
T Consensus 225 ~~~~h~~~~~--------~i~--~i~~~~~---------------~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~ 279 (397)
T 1sq9_A 225 SQHSMINNSN--------SIR--SVKFSPQ---------------GSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTH 279 (397)
T ss_dssp CCC---CCCC--------CEE--EEEECSS---------------TTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--
T ss_pred ccccccccCC--------ccc--eEEECCC---------------CCEEEEEecCCCCceEEEEECCCCcccceeccCcc
Confidence 51000 00 000 1222221 1223344556 8999999999999887765211
Q ss_pred cceeeeccCCCCCCCCCCCCCCCccCCCceE-EEEecCCeeeeEEEEEcccceEEEEECCCCcEEEEee
Q 039692 244 DIFYFTCLVPNNPDCPPGPNLDADFGEAPML-LTISTNGRFRDVVVAVQKSGFAWAFDRDSGDIIWFKL 311 (417)
Q Consensus 244 ~~~~~~~~~~~~~~c~~~~~~~~~~~~~p~v-~~~~~~G~~~~~v~~~~~~G~l~ald~~tG~~lW~~~ 311 (417)
...... . .. ....++. .....+ ++.|+.++.+|.++..|..+++.+....
T Consensus 280 ~~~~~~----------~----~~-~~~~~v~~~~~~~~---~~~l~~~~~dg~i~iwd~~~~~~~~~~~ 330 (397)
T 1sq9_A 280 SSQASL----------G----EF-AHSSWVMSLSFNDS---GETLCSAGWDGKLRFWDVKTKERITTLN 330 (397)
T ss_dssp ----------------C----CB-SBSSCEEEEEECSS---SSEEEEEETTSEEEEEETTTTEEEEEEE
T ss_pred cccccc----------c----cc-ccCCcEEEEEECCC---CCEEEEEeCCCeEEEEEcCCCceeEEEe
Confidence 000000 0 00 0011111 122223 3578888899999999999999988877
No 96
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=97.16 E-value=0.047 Score=51.33 Aligned_cols=191 Identities=12% Similarity=0.026 Sum_probs=109.5
Q ss_pred EECCEEEEeccCCcEEEEECCCCccceEeecccc--cCCcceeeEEee---ee------eEEEEEecCCCceeeeeecCC
Q 039692 46 VANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKL--TGLSGTGIVVNV---TV------AVVVAVSRSNGELVWSTQIDP 114 (417)
Q Consensus 46 ~~~g~v~v~~~~g~l~ald~~tG~~~W~~~~~~~--~~~~p~~~v~~~---~v------~~l~ald~~tG~~~W~~~~~~ 114 (417)
..+..++.++.+|.|+.+|.++|+.+.+...+.. +...|. ++... .+ +.+..+|..+++++.......
T Consensus 46 ~d~~~l~sg~~Dg~v~iwd~~~~~~~~~~~~~~v~~~~~~~~-~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~ 124 (343)
T 3lrv_A 46 YDKWVCMCRCEDGALHFTQLKDSKTITTITTPNPRTGGEHPA-IISRGPCNRLLLLYPGNQITILDSKTNKVLREIEVDS 124 (343)
T ss_dssp EEEEEEEEEEETTEEEEEEESSSSCEEEEEEECCCTTCCCCS-EEEECSTTEEEEEETTTEEEEEETTTCCEEEEEECCC
T ss_pred CCCCEEEEECCCCcEEEEECCCCcEEEEEecCCceeeeeCCc-eEEecCCCeEEEEEccCceEEeecCCcceeEEeecCC
Confidence 3455677788899999999999999888774432 122333 22222 11 566667777888777666443
Q ss_pred CC-CcceeeceeEEcCeEEEEeCCccCccccCcccCCCceEEEEeCCCCceeceeeecCCCCCCCCCCCCccccCCCcee
Q 039692 115 RP-RSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYSGAAVWGSSPAI 193 (417)
Q Consensus 115 ~~-~~~~~~sp~v~~~~v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~~gg~~~~~~pa~ 193 (417)
.. ...+...|.+.+..++.+.. ++.|..+|.++|+.+......... .+ ...++
T Consensus 125 ~~~v~~~~~~~~~~~~~l~s~s~--------------dg~i~~wd~~~~~~~~~~~~~~~~----------~i--~~~~~ 178 (343)
T 3lrv_A 125 ANEIIYMYGHNEVNTEYFIWADN--------------RGTIGFQSYEDDSQYIVHSAKSDV----------EY--SSGVL 178 (343)
T ss_dssp SSCEEEEECCC---CCEEEEEET--------------TCCEEEEESSSSCEEEEECCCSSC----------CC--CEEEE
T ss_pred CCCEEEEEcCCCCCCCEEEEEeC--------------CCcEEEEECCCCcEEEEEecCCCC----------ce--EEEEE
Confidence 21 11233344333455555554 689999999999885443221100 00 11233
Q ss_pred ecccCcccCCCCCCCCCCCCcccCCCCCCeEEEEECCCCceE-EEecCCCCcceeeeccCCCCCCCCCCCCCCCccCCCc
Q 039692 194 DVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIA-WAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAP 272 (417)
Q Consensus 194 d~~~~~~~~~~~~~p~~~~~~v~~~~~~~~l~ald~~tG~~~-W~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~p 272 (417)
.++ ...+..+..++.+..+|.++++.+ -+++.. +. .+
T Consensus 179 ~pd---------------g~~lasg~~dg~i~iwd~~~~~~~~~~~~~~-h~--------------------------~~ 216 (343)
T 3lrv_A 179 HKD---------------SLLLALYSPDGILDVYNLSSPDQASSRFPVD-EE--------------------------AK 216 (343)
T ss_dssp CTT---------------SCEEEEECTTSCEEEEESSCTTSCCEECCCC-TT--------------------------SC
T ss_pred CCC---------------CCEEEEEcCCCEEEEEECCCCCCCccEEecc-CC--------------------------CC
Confidence 222 122344567889999999998876 444431 11 11
Q ss_pred eE-EEEecCCeeeeEEEEEcccceEEEEECCCCcEEEE
Q 039692 273 ML-LTISTNGRFRDVVVAVQKSGFAWAFDRDSGDIIWF 309 (417)
Q Consensus 273 ~v-~~~~~~G~~~~~v~~~~~~G~l~ald~~tG~~lW~ 309 (417)
+. .....+| ..++.++ ++.+...|..+++.+..
T Consensus 217 v~~l~fs~~g---~~l~s~~-~~~v~iwd~~~~~~~~~ 250 (343)
T 3lrv_A 217 IKEVKFADNG---YWMVVEC-DQTVVCFDLRKDVGTLA 250 (343)
T ss_dssp EEEEEECTTS---SEEEEEE-SSBEEEEETTSSTTCBS
T ss_pred EEEEEEeCCC---CEEEEEe-CCeEEEEEcCCCCccee
Confidence 11 1222333 4566666 55999999999876544
No 97
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=97.13 E-value=0.14 Score=48.43 Aligned_cols=147 Identities=13% Similarity=0.007 Sum_probs=83.5
Q ss_pred eEEEEEecCCCceeeeeecCCCCCcceeeceeEEcCeEEEEeCCccCccccCcccCCCceEEEEeCCCCceeceeeecCC
Q 039692 94 AVVVAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYMLPD 173 (417)
Q Consensus 94 ~~l~ald~~tG~~~W~~~~~~~~~~~~~~sp~v~~~~v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~~~W~~~~~~~ 173 (417)
+.+...|.++|+.+-++.........+..+|.-.+..++.+.. ++.|..+|.++|+.+-.+.....
T Consensus 176 ~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~--------------Dg~v~~wd~~~~~~~~~~~~h~~ 241 (354)
T 2pbi_B 176 GTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGC--------------DKKAMVWDMRSGQCVQAFETHES 241 (354)
T ss_dssp SEEEEEETTTCCEEEEEECCSSCEEEEEECCCSSCCEEEEEET--------------TSCEEEEETTTCCEEEEECCCSS
T ss_pred CcEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCCEEEEEeC--------------CCeEEEEECCCCcEEEEecCCCC
Confidence 7778888888877655542211111111222111234555554 68999999999987765543111
Q ss_pred CCCCCCCCCCccccCCCceeecccCcccCCCCCCCCCCCCcccCCCCCCeEEEEECCCCceEEEecCCCCcceeeeccCC
Q 039692 174 NGGKRGGYSGAAVWGSSPAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVP 253 (417)
Q Consensus 174 ~~~~~~~~~gg~~~~~~pa~d~~~~~~~~~~~~~p~~~~~~v~~~~~~~~l~ald~~tG~~~W~~~~~~~~~~~~~~~~~ 253 (417)
. +. ..++.+. ...+..++.++.+..+|.++++.+-.+......
T Consensus 242 ~-----------v~--~v~~~p~---------------~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~--------- 284 (354)
T 2pbi_B 242 D-----------VN--SVRYYPS---------------GDAFASGSDDATCRLYDLRADREVAIYSKESII--------- 284 (354)
T ss_dssp C-----------EE--EEEECTT---------------SSEEEEEETTSCEEEEETTTTEEEEEECCTTCC---------
T ss_pred C-----------eE--EEEEeCC---------------CCEEEEEeCCCeEEEEECCCCcEEEEEcCCCcc---------
Confidence 0 00 1122221 123445567788999999888776554432211
Q ss_pred CCCCCCCCCCCCCccCCCceEEEEecCCeeeeEEEEEcccceEEEEECCCCcEEEEe
Q 039692 254 NNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDIIWFK 310 (417)
Q Consensus 254 ~~~~c~~~~~~~~~~~~~p~v~~~~~~G~~~~~v~~~~~~G~l~ald~~tG~~lW~~ 310 (417)
....-.....+| ..++.++.|+.++..|..+|+.+-..
T Consensus 285 ----------------~~~~~~~~s~~g---~~l~~g~~d~~i~vwd~~~~~~~~~l 322 (354)
T 2pbi_B 285 ----------------FGASSVDFSLSG---RLLFAGYNDYTINVWDVLKGSRVSIL 322 (354)
T ss_dssp ----------------SCEEEEEECTTS---SEEEEEETTSCEEEEETTTCSEEEEE
T ss_pred ----------------cceeEEEEeCCC---CEEEEEECCCcEEEEECCCCceEEEE
Confidence 011112233343 57888889999999999999877544
No 98
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=97.12 E-value=0.017 Score=64.41 Aligned_cols=186 Identities=13% Similarity=0.049 Sum_probs=111.0
Q ss_pred CCEEEEeccCCcEEEEECCCCccceEeecccc-cC---Cccee--eEEeeeeeEEEEEecCCCceeeeeecCCCCCccee
Q 039692 48 NGVVYFPSWNGYLYAVNAFNGALIWEQNLSKL-TG---LSGTG--IVVNVTVAVVVAVSRSNGELVWSTQIDPRPRSQIT 121 (417)
Q Consensus 48 ~g~v~v~~~~g~l~ald~~tG~~~W~~~~~~~-~~---~~p~~--~v~~~~v~~l~ald~~tG~~~W~~~~~~~~~~~~~ 121 (417)
+..+++++.+|.++.+|..+++.+........ +. .+|.+ ++..+..+.+..+|..+|+.......... ...+.
T Consensus 973 g~~l~~g~~~g~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~-v~~~~ 1051 (1249)
T 3sfz_A 973 LEYVAFGDEDGAIKIIELPNNRVFSSGVGHKKAVRHIQFTADGKTLISSSEDSVIQVWNWQTGDYVFLQAHQET-VKDFR 1051 (1249)
T ss_dssp SSEEEEEETTSCCEEEETTTTSCEEECCCCSSCCCCEEECSSSSCEEEECSSSBEEEEETTTTEEECCBCCSSC-EEEEE
T ss_pred CCEEEEEcCCCCEEEEEcCCCceeeecccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCceEEEecCCCc-EEEEE
Confidence 34677888899999999999988766553321 11 11211 12222338899999999988754432211 11122
Q ss_pred eceeEEcCeEEEEeCCccCccccCcccCCCceEEEEeCCCCceeceeeecCCCCCCCCCCCCccccCCCceeecccCccc
Q 039692 122 MSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYSGAAVWGSSPAIDVIRRQKQ 201 (417)
Q Consensus 122 ~sp~v~~~~v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~~gg~~~~~~pa~d~~~~~~~ 201 (417)
.+| ++.++.+.. ++.+..+|..+|+.+.++...... + ...++.++.
T Consensus 1052 ~~~---~~~l~~~~~--------------dg~v~vwd~~~~~~~~~~~~~~~~-----------v--~~~~~s~d~---- 1097 (1249)
T 3sfz_A 1052 LLQ---DSRLLSWSF--------------DGTVKVWNVITGRIERDFTCHQGT-----------V--LSCAISSDA---- 1097 (1249)
T ss_dssp ECS---SSEEEEEES--------------SSEEEEEETTTTCCCEEEECCSSC-----------C--CCEEECSSS----
T ss_pred EcC---CCcEEEEEC--------------CCcEEEEECCCCceeEEEcccCCc-----------E--EEEEECCCC----
Confidence 222 666766665 589999999999988776542111 1 122332221
Q ss_pred CCCCCCCCCCCCcccCCCCCCeEEEEECCCCceEEEecCCCCcceeeeccCCCCCCCCCCCCCCCccCCCce-EEEEecC
Q 039692 202 NNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPM-LLTISTN 280 (417)
Q Consensus 202 ~~~~~~p~~~~~~v~~~~~~~~l~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~p~-v~~~~~~ 280 (417)
..+..++.++.+..+|..+++.+....... .++ -.....+
T Consensus 1098 -----------~~l~s~s~d~~v~iwd~~~~~~~~~l~~h~----------------------------~~v~~~~~s~d 1138 (1249)
T 3sfz_A 1098 -----------TKFSSTSADKTAKIWSFDLLSPLHELKGHN----------------------------GCVRCSAFSLD 1138 (1249)
T ss_dssp -----------SSCEEECCSSCCCEECSSSSSCSBCCCCCS----------------------------SCEEEEEECSS
T ss_pred -----------CEEEEEcCCCcEEEEECCCcceeeeeccCC----------------------------CcEEEEEECCC
Confidence 123345566778888888777654433211 111 1122233
Q ss_pred CeeeeEEEEEcccceEEEEECCCCcEEEEe
Q 039692 281 GRFRDVVVAVQKSGFAWAFDRDSGDIIWFK 310 (417)
Q Consensus 281 G~~~~~v~~~~~~G~l~ald~~tG~~lW~~ 310 (417)
+..++.++.||.++..|..+|+.+...
T Consensus 1139 ---g~~lat~~~dg~i~vwd~~~~~~~~~~ 1165 (1249)
T 3sfz_A 1139 ---GILLATGDDNGEIRIWNVSDGQLLHSC 1165 (1249)
T ss_dssp ---SSEEEEEETTSCCCEEESSSSCCCCCC
T ss_pred ---CCEEEEEeCCCEEEEEECCCCceEEEe
Confidence 357888889999999999999887654
No 99
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=97.03 E-value=0.11 Score=47.99 Aligned_cols=118 Identities=13% Similarity=0.132 Sum_probs=61.5
Q ss_pred ceeeCcEEE--CCEEEEec-cCCcEEEEECCCCccceEeecccccCCcceeeEE--ee-e----eeEEEEEecCCCceee
Q 039692 39 DISATPAVA--NGVVYFPS-WNGYLYAVNAFNGALIWEQNLSKLTGLSGTGIVV--NV-T----VAVVVAVSRSNGELVW 108 (417)
Q Consensus 39 ~~~~~p~~~--~g~v~v~~-~~g~l~ald~~tG~~~W~~~~~~~~~~~p~~~v~--~~-~----v~~l~ald~~tG~~~W 108 (417)
.+.-.|+.. ++.+|+.+ ..+.|+.+|+++++.. .+..+.. +..+.. ++ + ...|+.+|.++|+...
T Consensus 13 ~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~~-~~~~~~~----~~~i~~~~dG~l~v~~~~~l~~~d~~~g~~~~ 87 (297)
T 3g4e_A 13 RCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQVQ-RVTMDAP----VSSVALRQSGGYVATIGTKFCALNWKEQSAVV 87 (297)
T ss_dssp SBEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEE-EEECSSC----EEEEEEBTTSSEEEEETTEEEEEETTTTEEEE
T ss_pred ccccCCeEECCCCEEEEEECCCCEEEEEECCCCcEE-EEeCCCc----eEEEEECCCCCEEEEECCeEEEEECCCCcEEE
Confidence 345567766 36777665 5689999999888752 2222221 211111 12 1 2789999999998765
Q ss_pred eeecCCCCCcceeeceeEE-cCeEEEEeCCccCccccCcccCCCceEEEEeCCCCce
Q 039692 109 STQIDPRPRSQITMSGSVY-MGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRI 164 (417)
Q Consensus 109 ~~~~~~~~~~~~~~sp~v~-~~~v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~~ 164 (417)
.................+. ++++|++........ ..-....+.|+.+|.. |+.
T Consensus 88 ~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~--~~~~~~~~~l~~~d~~-g~~ 141 (297)
T 3g4e_A 88 LATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAP--AVLERHQGALYSLFPD-HHV 141 (297)
T ss_dssp EEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBT--TBCCTTCEEEEEECTT-SCE
T ss_pred EEecCCCCCCCCCCCEEECCCCCEEEecCCccccc--ccccCCCcEEEEEECC-CCE
Confidence 4443211111101111122 678998764311100 0000124689999985 654
No 100
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=97.02 E-value=0.035 Score=50.51 Aligned_cols=102 Identities=13% Similarity=0.153 Sum_probs=63.0
Q ss_pred CCEEEEecc--CCcEEEEECCCCccceEeecccccCCcceeeEE--ee--ee-----eEEEEEecCCCceeeeeecCCCC
Q 039692 48 NGVVYFPSW--NGYLYAVNAFNGALIWEQNLSKLTGLSGTGIVV--NV--TV-----AVVVAVSRSNGELVWSTQIDPRP 116 (417)
Q Consensus 48 ~g~v~v~~~--~g~l~ald~~tG~~~W~~~~~~~~~~~p~~~v~--~~--~v-----~~l~ald~~tG~~~W~~~~~~~~ 116 (417)
++.+|+++. ++.|+.+| .+|+.+.++..... ..|.++.. ++ ++ +.|+.+|. +|+.++.+......
T Consensus 88 ~g~l~v~~~~~~~~i~~~d-~~g~~~~~~~~~~~--~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~ 163 (286)
T 1q7f_A 88 SGDIIVTERSPTHQIQIYN-QYGQFVRKFGATIL--QHPRGVTVDNKGRIIVVECKVMRVIIFDQ-NGNVLHKFGCSKHL 163 (286)
T ss_dssp TTEEEEEECGGGCEEEEEC-TTSCEEEEECTTTC--SCEEEEEECTTSCEEEEETTTTEEEEECT-TSCEEEEEECTTTC
T ss_pred CCeEEEEcCCCCCEEEEEC-CCCcEEEEecCccC--CCceEEEEeCCCCEEEEECCCCEEEEEcC-CCCEEEEeCCCCcc
Confidence 679999884 78999999 58988877654321 12322221 12 22 68899994 68887776532211
Q ss_pred CcceeeceeEE-cCeEEEEeCCccCccccCcccCCCceEEEEeCCCCceeceee
Q 039692 117 RSQITMSGSVY-MGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTY 169 (417)
Q Consensus 117 ~~~~~~sp~v~-~~~v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~~~W~~~ 169 (417)
. .....++. ++.+|+.... ++.|+.+|. +|+.+.++.
T Consensus 164 ~--~p~~i~~~~~g~l~v~~~~-------------~~~i~~~~~-~g~~~~~~~ 201 (286)
T 1q7f_A 164 E--FPNGVVVNDKQEIFISDNR-------------AHCVKVFNY-EGQYLRQIG 201 (286)
T ss_dssp S--SEEEEEECSSSEEEEEEGG-------------GTEEEEEET-TCCEEEEES
T ss_pred C--CcEEEEECCCCCEEEEECC-------------CCEEEEEcC-CCCEEEEEc
Confidence 1 11111222 5788887653 578999998 487776654
No 101
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=96.94 E-value=0.047 Score=51.82 Aligned_cols=236 Identities=10% Similarity=-0.042 Sum_probs=123.4
Q ss_pred EEEEeccCCcEEEEECCCCccceEeecccccC---Ccce-----eeEEeeeeeEEEEEecCCCceeeeeecCCCCCccee
Q 039692 50 VVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG---LSGT-----GIVVNVTVAVVVAVSRSNGELVWSTQIDPRPRSQIT 121 (417)
Q Consensus 50 ~v~v~~~~g~l~ald~~tG~~~W~~~~~~~~~---~~p~-----~~v~~~~v~~l~ald~~tG~~~W~~~~~~~~~~~~~ 121 (417)
.++.++.++.|..+|.++++.+..+....... ..|. -++.....+.++.+|..+++.+............+.
T Consensus 114 ~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~v~~~~ 193 (408)
T 4a11_B 114 MFTSSSFDKTLKVWDTNTLQTADVFNFEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQGHRQEILAVS 193 (408)
T ss_dssp CEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEECCCCSCEEEEE
T ss_pred EEEEEeCCCeEEEeeCCCCccceeccCCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeeecCCCCcEEEEE
Confidence 56677789999999999999988887654321 1111 011122238899999999988877764322111122
Q ss_pred eceeEEcCe--EEEEeCCccCccccCcccCCCceEEEEeCCCCceece-eeecCCCCC--CCCCCC--CccccCCCceee
Q 039692 122 MSGSVYMGA--FYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQ-TYMLPDNGG--KRGGYS--GAAVWGSSPAID 194 (417)
Q Consensus 122 ~sp~v~~~~--v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~~~W~-~~~~~~~~~--~~~~~~--gg~~~~~~pa~d 194 (417)
.+| ++. ++++.. ++.|..+|.++++.... ......... ...... .+.+. ..++.
T Consensus 194 ~~~---~~~~ll~~~~~--------------dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~--~~~~~ 254 (408)
T 4a11_B 194 WSP---RYDYILATASA--------------DSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVN--GLCFT 254 (408)
T ss_dssp ECS---SCTTEEEEEET--------------TSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEE--EEEEC
T ss_pred ECC---CCCcEEEEEcC--------------CCcEEEEECCCCCcccccccccccccceeeccccccccCcee--EEEEc
Confidence 233 332 445554 68999999988874332 211100000 000000 00000 01111
Q ss_pred cccCcccCCCCCCCCCCCCcccCCCCCCeEEEEECCCCceEEEecCCCCcceeeeccCCCCCCCCCCCCCCCccCCCceE
Q 039692 195 VIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPML 274 (417)
Q Consensus 195 ~~~~~~~~~~~~~p~~~~~~v~~~~~~~~l~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~p~v 274 (417)
| ....+..+..++.+..+|.++++............ ........
T Consensus 255 -------------~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~---------------------~~~~~~~~ 298 (408)
T 4a11_B 255 -------------S--DGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNN---------------------SKKGLKFT 298 (408)
T ss_dssp -------------T--TSSEEEEEETTSCEEEEETTTCCBCCCCCCCCCCC---------------------CSSCCCCE
T ss_pred -------------C--CCCEEEEecCCCeEEEEECCCCccceecccccccc---------------------ccccceeE
Confidence 1 11234445567778888888877644322211100 00000111
Q ss_pred EEEecCCeeeeEEEEEcccceEEEEECCCCcEEEEeecCCCCCCCcceecc--cccCCeEEEEeccCCceeeeecCC
Q 039692 275 LTISTNGRFRDVVVAVQKSGFAWAFDRDSGDIIWFKLAGPGGREGGGVWGA--ATDGRRVYTNIVNNDRIIWSTADP 349 (417)
Q Consensus 275 ~~~~~~G~~~~~v~~~~~~G~l~ald~~tG~~lW~~~~~~~~~~g~~~~~~--~~~~~~vy~~~~~~~~~~W~~~~~ 349 (417)
. .... ...+++.+.++.++.+|..+++.+...... . .....+ ..++..++....++.-.+|..+..
T Consensus 299 ~--~~~~--~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~----~-~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~ 366 (408)
T 4a11_B 299 V--SCGC--SSEFVFVPYGSTIAVYTVYSGEQITMLKGH----Y-KTVDCCVFQSNFQELYSGSRDCNILAWVPSLY 366 (408)
T ss_dssp E--CCSS--SSCEEEEEETTEEEEEETTTCCEEEEECCC----S-SCEEEEEEETTTTEEEEEETTSCEEEEEECC-
T ss_pred E--ecCC--CceEEEEecCCEEEEEECcCCcceeeeccC----C-CeEEEEEEcCCCCEEEEECCCCeEEEEeCCCC
Confidence 1 0011 234555677899999999999999877632 1 111222 234566666666666778887653
No 102
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=96.94 E-value=0.02 Score=54.64 Aligned_cols=108 Identities=14% Similarity=-0.003 Sum_probs=62.2
Q ss_pred CceEEEEeCCCCceeceeeecCCCCCCCCCCCCccccCCCceeecccCcccCCCCCCCCCCCCcccCCCCCCeEEEEECC
Q 039692 151 RGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYSGAAVWGSSPAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDID 230 (417)
Q Consensus 151 ~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~~gg~~~~~~pa~d~~~~~~~~~~~~~p~~~~~~v~~~~~~~~l~ald~~ 230 (417)
++.|..+|.++++.+..++..... +. ..++.+.. +..+..+..++.+...|.+
T Consensus 160 dg~v~iwd~~~~~~~~~~~~h~~~-----------v~--~v~~s~~~--------------~~~~~s~~~dg~v~~wd~~ 212 (357)
T 4g56_B 160 DFSVKVWDLSQKAVLKSYNAHSSE-----------VN--CVAACPGK--------------DTIFLSCGEDGRILLWDTR 212 (357)
T ss_dssp TSCEEEEETTTTEEEEEECCCSSC-----------EE--EEEECTTC--------------SSCEEEEETTSCEEECCTT
T ss_pred CCeEEEEECCCCcEEEEEcCCCCC-----------EE--EEEEccCC--------------CceeeeeccCCceEEEECC
Confidence 689999999999998876542110 00 11121110 1122344556778888888
Q ss_pred CCceEEEecCCCCcceeeeccCCCCCCCCCCCCCCCccCCCceEEEEecCCeeeeEEEEEcccceEEEEECCCCcEEEEe
Q 039692 231 SGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDIIWFK 310 (417)
Q Consensus 231 tG~~~W~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~p~v~~~~~~G~~~~~v~~~~~~G~l~ald~~tG~~lW~~ 310 (417)
+++.+-........ ..+.-+....++ +.++..++.++.++.+|..+++.+-..
T Consensus 213 ~~~~~~~~~~~~~~-------------------------~~v~~v~~sp~~--~~~la~g~~d~~i~~wd~~~~~~~~~~ 265 (357)
T 4g56_B 213 KPKPATRIDFCASD-------------------------TIPTSVTWHPEK--DDTFACGDETGNVSLVNIKNPDSAQTS 265 (357)
T ss_dssp SSSCBCBCCCTTCC-------------------------SCEEEEEECTTS--TTEEEEEESSSCEEEEESSCGGGCEEE
T ss_pred CCceeeeeeecccc-------------------------ccccchhhhhcc--cceEEEeecccceeEEECCCCcEeEEE
Confidence 87765433332221 011111122222 356777889999999999999887666
Q ss_pred ec
Q 039692 311 LA 312 (417)
Q Consensus 311 ~~ 312 (417)
..
T Consensus 266 ~~ 267 (357)
T 4g56_B 266 AV 267 (357)
T ss_dssp CC
T ss_pred ec
Confidence 53
No 103
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=96.94 E-value=0.21 Score=45.02 Aligned_cols=97 Identities=9% Similarity=0.125 Sum_probs=52.7
Q ss_pred CCEEEEecc-CCcEEEEECCCCccceEeecccccCCcceeeEE--ee--ee-----eEEEEEecCCCceeeeeecCCCCC
Q 039692 48 NGVVYFPSW-NGYLYAVNAFNGALIWEQNLSKLTGLSGTGIVV--NV--TV-----AVVVAVSRSNGELVWSTQIDPRPR 117 (417)
Q Consensus 48 ~g~v~v~~~-~g~l~ald~~tG~~~W~~~~~~~~~~~p~~~v~--~~--~v-----~~l~ald~~tG~~~W~~~~~~~~~ 117 (417)
++.+|+++. ++.|+.+|++ |+... +..... ...|.++.. ++ .+ +.|+.+|.+ |+.. .+..+...
T Consensus 25 ~g~l~v~~~~~~~v~~~d~~-~~~~~-~~~~~~-~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~-~~~~~~~~- 98 (299)
T 2z2n_A 25 KGKVWITQHKANMISCINLD-GKITE-YPLPTP-DAKVMCLTISSDGEVWFTENAANKIGRITKK-GIIK-EYTLPNPD- 98 (299)
T ss_dssp TSCEEEEETTTTEEEEECTT-CCEEE-EECSST-TCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEE-EEECSSTT-
T ss_pred CCCEEEEecCCCcEEEEcCC-CCeEE-ecCCcc-cCceeeEEECCCCCEEEeCCCCCeEEEECCC-CcEE-EEeCCCcC-
Confidence 678998876 6789999987 76432 222211 122333222 12 11 578888865 5432 12221111
Q ss_pred cceeeceeEE-cCeEEEEeCCccCccccCcccCCCceEEEEeCCCCcee
Q 039692 118 SQITMSGSVY-MGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRII 165 (417)
Q Consensus 118 ~~~~~sp~v~-~~~v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~~~ 165 (417)
......++. ++.+|++... ++.|+.+|+ +|+..
T Consensus 99 -~~~~~i~~~~~g~l~v~~~~-------------~~~i~~~d~-~g~~~ 132 (299)
T 2z2n_A 99 -SAPYGITEGPNGDIWFTEMN-------------GNRIGRITD-DGKIR 132 (299)
T ss_dssp -CCEEEEEECTTSCEEEEETT-------------TTEEEEECT-TCCEE
T ss_pred -CCceeeEECCCCCEEEEecC-------------CceEEEECC-CCCEE
Confidence 011111222 5788887653 478999999 67665
No 104
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=96.89 E-value=0.21 Score=55.45 Aligned_cols=233 Identities=12% Similarity=-0.011 Sum_probs=128.8
Q ss_pred CCEEEEeccCCcEEEEECCCCccceEeecccc-c---CCcce----eeEEeeeeeEEEEEecCCCceeeeeecCCCCCcc
Q 039692 48 NGVVYFPSWNGYLYAVNAFNGALIWEQNLSKL-T---GLSGT----GIVVNVTVAVVVAVSRSNGELVWSTQIDPRPRSQ 119 (417)
Q Consensus 48 ~g~v~v~~~~g~l~ald~~tG~~~W~~~~~~~-~---~~~p~----~~v~~~~v~~l~ald~~tG~~~W~~~~~~~~~~~ 119 (417)
+..++.++.++.|..+|..+|+.+.++..... + ..+|. -++..+..+.+..+|..+|+.+............
T Consensus 669 ~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~h~~~v~~ 748 (1249)
T 3sfz_A 669 DSYIATCSADKKVKIWDSATGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFGHTNSVNH 748 (1249)
T ss_dssp SSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEECCCSSCEEE
T ss_pred CCEEEEEeCCCeEEEEECCCCceEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhheecCCCCCEEE
Confidence 34677778899999999999998887765421 1 01110 0111122378999999999988776632221112
Q ss_pred eeeceeEEcCeEEEEeCCccCccccCcccCCCceEEEEeCCCCceeceeeecCCCCCCCCCCCCccccCCCceeecccCc
Q 039692 120 ITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYSGAAVWGSSPAIDVIRRQ 199 (417)
Q Consensus 120 ~~~sp~v~~~~v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~~gg~~~~~~pa~d~~~~~ 199 (417)
+..+| .+..++.++. ++.|..+|..+++............... .+.-+...
T Consensus 749 ~~~sp--~~~~l~s~s~--------------dg~v~vwd~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~-- 799 (1249)
T 3sfz_A 749 CRFSP--DDELLASCSA--------------DGTLRLWDVRSANERKSINVKRFFLSSE-----------DPPEDVEV-- 799 (1249)
T ss_dssp EEECS--STTEEEEEES--------------SSEEEEEEGGGTEEEEEEECCCCC-------------------CCCC--
T ss_pred EEEec--CCCEEEEEEC--------------CCeEEEEeCCCCcccceecccccccccC-----------Cccccccc--
Confidence 22333 2334555554 6899999999999887766532111000 00000000
Q ss_pred ccCCCCCCCCCCCCcccCCCCCCeEEEEECCCCceEEEecCCCCcceeeeccCCCCCCCCCCCCCCCccCCCceEEEEec
Q 039692 200 KQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTIST 279 (417)
Q Consensus 200 ~~~~~~~~p~~~~~~v~~~~~~~~l~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~p~v~~~~~ 279 (417)
........ .++........+.+..+|..+++.+......... ...-.....
T Consensus 800 ~v~~~~~s---~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~--------------------------~v~~~~~sp 850 (1249)
T 3sfz_A 800 IVKCCSWS---ADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHS--------------------------TIQYCDFSP 850 (1249)
T ss_dssp CBCCCCBC---TTSSEEEEEETTEEEEEETTTCCEEEEEECSSSS--------------------------CCCEEEECS
T ss_pred eEEEEEEC---CCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCC--------------------------ceEEEEEcC
Confidence 00000011 1222222233678888999998888776644321 011111222
Q ss_pred CCeeeeEEEEEcccceEEEEECCCCcEEEEeecCCCCCCCcceecc--cccCCeEEEEeccCCceeeee
Q 039692 280 NGRFRDVVVAVQKSGFAWAFDRDSGDIIWFKLAGPGGREGGGVWGA--ATDGRRVYTNIVNNDRIIWST 346 (417)
Q Consensus 280 ~G~~~~~v~~~~~~G~l~ald~~tG~~lW~~~~~~~~~~g~~~~~~--~~~~~~vy~~~~~~~~~~W~~ 346 (417)
+ +..+++++.+|.+...|..+++.+...... . .....+ ..++..++....++.-.+|..
T Consensus 851 ~---~~~l~~~~~dg~v~vwd~~~~~~~~~~~~h----~-~~v~~v~~spdg~~l~s~s~dg~v~vw~~ 911 (1249)
T 3sfz_A 851 Y---DHLAVIALSQYCVELWNIDSRLKVADCRGH----L-SWVHGVMFSPDGSSFLTASDDQTIRVWET 911 (1249)
T ss_dssp S---TTEEEEECSSSCEEEEETTTTEEEEEECCC----S-SCEEEEEECTTSSEEEEEETTSCEEEEEH
T ss_pred C---CCEEEEEeCCCeEEEEEcCCCceeeecCCC----c-cceEEEEECCCCCEEEEEeCCCeEEEEEc
Confidence 3 457888899999999999999888776532 1 111122 234556666665555666764
No 105
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=96.87 E-value=0.25 Score=44.77 Aligned_cols=188 Identities=11% Similarity=0.076 Sum_probs=98.6
Q ss_pred EECCEEEEeccCCcEEEEECCCCccceEeecccc-cC---Cccee--eEEeeeeeEEEEEecCC---CceeeeeecCCCC
Q 039692 46 VANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKL-TG---LSGTG--IVVNVTVAVVVAVSRSN---GELVWSTQIDPRP 116 (417)
Q Consensus 46 ~~~g~v~v~~~~g~l~ald~~tG~~~W~~~~~~~-~~---~~p~~--~v~~~~v~~l~ald~~t---G~~~W~~~~~~~~ 116 (417)
..+..++.++.+|.|..+|.++++..-....... +. .+|.+ ++..+..+.+..+|..+ ++.+.......
T Consensus 27 ~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~-- 104 (313)
T 3odt_A 27 VDDSKVASVSRDGTVRLWSKDDQWLGTVVYTGQGFLNSVCYDSEKELLLFGGKDTMINGVPLFATSGEDPLYTLIGHQ-- 104 (313)
T ss_dssp EETTEEEEEETTSEEEEEEESSSEEEEEEEECSSCEEEEEEETTTTEEEEEETTSCEEEEETTCCTTSCC-CEECCCS--
T ss_pred cCCCEEEEEEcCCcEEEEECCCCEEEEEeecCCccEEEEEECCCCCEEEEecCCCeEEEEEeeecCCCCcccchhhcc--
Confidence 3466888888999999999988887666554321 10 11110 01111125555555433 23343333111
Q ss_pred CcceeeceeEEcCeEEEEeCCccCccccCcccCCCceEEEEeCCCCceeceeeecCCCCCCCCCCCCccccCCCceeecc
Q 039692 117 RSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYSGAAVWGSSPAIDVI 196 (417)
Q Consensus 117 ~~~~~~sp~v~~~~v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~~gg~~~~~~pa~d~~ 196 (417)
..+ .+-...++.++++.. ++.|..+| +++.+..+...... +. ...+.+.
T Consensus 105 -~~i-~~~~~~~~~l~~~~~--------------d~~i~~~d--~~~~~~~~~~~~~~-----------v~--~~~~~~~ 153 (313)
T 3odt_A 105 -GNV-CSLSFQDGVVISGSW--------------DKTAKVWK--EGSLVYNLQAHNAS-----------VW--DAKVVSF 153 (313)
T ss_dssp -SCE-EEEEEETTEEEEEET--------------TSEEEEEE--TTEEEEEEECCSSC-----------EE--EEEEEET
T ss_pred -cCE-EEEEecCCEEEEEeC--------------CCCEEEEc--CCcEEEecccCCCc-----------ee--EEEEccC
Confidence 111 111224555666655 58999999 67777776542110 00 1111110
Q ss_pred cCcccCCCCCCCCCCCCcccCCCCCCeEEEEECCCCceEEEecCCCCcceeeeccCCCCCCCCCCCCCCCccCCCceEEE
Q 039692 197 RRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLT 276 (417)
Q Consensus 197 ~~~~~~~~~~~p~~~~~~v~~~~~~~~l~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~p~v~~ 276 (417)
....+..+..++.+..+| .++.+-.+...... ...-..
T Consensus 154 --------------~~~~l~~~~~d~~i~i~d--~~~~~~~~~~~~~~--------------------------~i~~~~ 191 (313)
T 3odt_A 154 --------------SENKFLTASADKTIKLWQ--NDKVIKTFSGIHND--------------------------VVRHLA 191 (313)
T ss_dssp --------------TTTEEEEEETTSCEEEEE--TTEEEEEECSSCSS--------------------------CEEEEE
T ss_pred --------------CCCEEEEEECCCCEEEEe--cCceEEEEeccCcc--------------------------cEEEEE
Confidence 112233445567788887 44444444331111 111111
Q ss_pred EecCCeeeeEEEEEcccceEEEEECCCCcEEEEeec
Q 039692 277 ISTNGRFRDVVVAVQKSGFAWAFDRDSGDIIWFKLA 312 (417)
Q Consensus 277 ~~~~G~~~~~v~~~~~~G~l~ald~~tG~~lW~~~~ 312 (417)
...++ .++.++.+|.++.+|..+++.+.+...
T Consensus 192 ~~~~~----~~~~~~~dg~i~i~d~~~~~~~~~~~~ 223 (313)
T 3odt_A 192 VVDDG----HFISCSNDGLIKLVDMHTGDVLRTYEG 223 (313)
T ss_dssp EEETT----EEEEEETTSEEEEEETTTCCEEEEEEC
T ss_pred EcCCC----eEEEccCCCeEEEEECCchhhhhhhhc
Confidence 12232 377888999999999999999988764
No 106
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=96.87 E-value=0.094 Score=48.38 Aligned_cols=149 Identities=10% Similarity=-0.020 Sum_probs=84.9
Q ss_pred eeeEEEEEecCCCceeeeeecCCCCCcceeeceeEEcCeEEEEeCCccCccccCcccCCCceEEEEeCCCCceeceeeec
Q 039692 92 TVAVVVAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYML 171 (417)
Q Consensus 92 ~v~~l~ald~~tG~~~W~~~~~~~~~~~~~~sp~v~~~~v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~~~W~~~~~ 171 (417)
..+.+...|.++++.+-..+........+..+| .+..++.+.. ++.|..+|.++|+.+.++...
T Consensus 33 ~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~s~s~--------------d~~i~vwd~~~~~~~~~~~~h 96 (304)
T 2ynn_A 33 YSGRVELWNYETQVEVRSIQVTETPVRAGKFIA--RKNWIIVGSD--------------DFRIRVFNYNTGEKVVDFEAH 96 (304)
T ss_dssp TTSEEEEEETTTTEEEEEEECCSSCEEEEEEEG--GGTEEEEEET--------------TSEEEEEETTTCCEEEEEECC
T ss_pred CCCcEEEEECCCCceeEEeeccCCcEEEEEEeC--CCCEEEEECC--------------CCEEEEEECCCCcEEEEEeCC
Confidence 347788889889988877764332211111122 1344555554 689999999999998776542
Q ss_pred CCCCCCCCCCCCccccCCCceeecccCcccCCCCCCCCCCCCcccCCCCCCeEEEEECCCCceEEEecCCCCcceeeecc
Q 039692 172 PDNGGKRGGYSGAAVWGSSPAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCL 251 (417)
Q Consensus 172 ~~~~~~~~~~~gg~~~~~~pa~d~~~~~~~~~~~~~p~~~~~~v~~~~~~~~l~ald~~tG~~~W~~~~~~~~~~~~~~~ 251 (417)
... +. ..++.+. ...+..++.++.+...|.+++..+-+.-.. +.
T Consensus 97 ~~~-----------v~--~~~~~~~---------------~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~-h~------- 140 (304)
T 2ynn_A 97 PDY-----------IR--SIAVHPT---------------KPYVLSGSDDLTVKLWNWENNWALEQTFEG-HE------- 140 (304)
T ss_dssp SSC-----------EE--EEEECSS---------------SSEEEEEETTSCEEEEEGGGTTEEEEEECC-CC-------
T ss_pred CCc-----------EE--EEEEcCC---------------CCEEEEECCCCeEEEEECCCCcchhhhhcc-cC-------
Confidence 110 10 1122221 123445566788888888877544322111 11
Q ss_pred CCCCCCCCCCCCCCCccCCCceEEEEecCCeeeeEEEEEcccceEEEEECCCCcEEEEeec
Q 039692 252 VPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDIIWFKLA 312 (417)
Q Consensus 252 ~~~~~~c~~~~~~~~~~~~~p~v~~~~~~G~~~~~v~~~~~~G~l~ald~~tG~~lW~~~~ 312 (417)
.++ ..+..+-..+..++.++.|+.+...|..+++.......
T Consensus 141 -------------------~~v-~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~ 181 (304)
T 2ynn_A 141 -------------------HFV-MCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTT 181 (304)
T ss_dssp -------------------SCE-EEEEECTTCTTEEEEEETTSEEEEEETTCSSCSEEEEC
T ss_pred -------------------CcE-EEEEECCCCCCEEEEEeCCCeEEEEECCCCCccceecc
Confidence 111 11111111135788889999999999988877666654
No 107
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=96.86 E-value=0.19 Score=48.28 Aligned_cols=205 Identities=12% Similarity=0.072 Sum_probs=102.4
Q ss_pred CEEEEeccCCcEEEEECCCCccceEeecccc-c---CCccee--eEEeeeeeEEEEEecCCCceeeeeecCCCCCcceee
Q 039692 49 GVVYFPSWNGYLYAVNAFNGALIWEQNLSKL-T---GLSGTG--IVVNVTVAVVVAVSRSNGELVWSTQIDPRPRSQITM 122 (417)
Q Consensus 49 g~v~v~~~~g~l~ald~~tG~~~W~~~~~~~-~---~~~p~~--~v~~~~v~~l~ald~~tG~~~W~~~~~~~~~~~~~~ 122 (417)
..++.++.++.|..+|.++++.+-.+..... + ..+|.+ ++.....+.+...|..+|+........... ..+..
T Consensus 136 ~~l~s~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~v-~~~~~ 214 (393)
T 1erj_A 136 KFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIEDGV-TTVAV 214 (393)
T ss_dssp SEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSSCE-EEEEE
T ss_pred CEEEEEcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEEEcCCCc-EEEEE
Confidence 4677777899999999999987655543221 1 111211 122223388999999999988777643221 11111
Q ss_pred ceeEEcCe-EEEEeCCccCccccCcccCCCceEEEEeCCCCceeceeeecCCCCCCCCCCCCccccCCCceeecccCccc
Q 039692 123 SGSVYMGA-FYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYSGAAVWGSSPAIDVIRRQKQ 201 (417)
Q Consensus 123 sp~v~~~~-v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~~gg~~~~~~pa~d~~~~~~~ 201 (417)
+| .++. ++.+.. ++.|..+|.++|+.+-+......... + . ...+. ..++.++
T Consensus 215 ~~--~~~~~l~~~s~--------------d~~v~iwd~~~~~~~~~~~~~~~~~~--~-h-~~~v~--~v~~~~~----- 267 (393)
T 1erj_A 215 SP--GDGKYIAAGSL--------------DRAVRVWDSETGFLVERLDSENESGT--G-H-KDSVY--SVVFTRD----- 267 (393)
T ss_dssp CS--TTCCEEEEEET--------------TSCEEEEETTTCCEEEEEC------C--C-C-SSCEE--EEEECTT-----
T ss_pred EC--CCCCEEEEEcC--------------CCcEEEEECCCCcEEEeecccccCCC--C-C-CCCEE--EEEECCC-----
Confidence 11 1444 444443 68999999999988766543111000 0 0 00010 1122211
Q ss_pred CCCCCCCCCCCCcccCCCCCCeEEEEECCCCceEEEecCCCCc--ceeeeccCCCCCCCCCCCCCCCccCCCceEEEEec
Q 039692 202 NNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYD--IFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTIST 279 (417)
Q Consensus 202 ~~~~~~p~~~~~~v~~~~~~~~l~ald~~tG~~~W~~~~~~~~--~~~~~~~~~~~~~c~~~~~~~~~~~~~p~v~~~~~ 279 (417)
...+..+..++.+...|.++++........... ...+. ..... +..+..
T Consensus 268 ----------g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~------------------~h~~~-v~~~~~ 318 (393)
T 1erj_A 268 ----------GQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYI------------------GHKDF-VLSVAT 318 (393)
T ss_dssp ----------SSEEEEEETTSEEEEEEC---------------CEEEEEE------------------CCSSC-EEEEEE
T ss_pred ----------CCEEEEEeCCCEEEEEECCCCCCcccccCCCCCcceEEEe------------------cccCc-EEEEEE
Confidence 123445556777888887765543322111100 00000 00111 112221
Q ss_pred CCeeeeEEEEEcccceEEEEECCCCcEEEEee
Q 039692 280 NGRFRDVVVAVQKSGFAWAFDRDSGDIIWFKL 311 (417)
Q Consensus 280 ~G~~~~~v~~~~~~G~l~ald~~tG~~lW~~~ 311 (417)
.. .+..|+.++.||.++..|..+|+.+....
T Consensus 319 ~~-~~~~l~sgs~D~~v~iwd~~~~~~~~~l~ 349 (393)
T 1erj_A 319 TQ-NDEYILSGSKDRGVLFWDKKSGNPLLMLQ 349 (393)
T ss_dssp CG-GGCEEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred CC-CCCEEEEEeCCCeEEEEECCCCeEEEEEC
Confidence 11 14578888999999999999999887665
No 108
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=96.83 E-value=0.3 Score=45.21 Aligned_cols=184 Identities=11% Similarity=0.023 Sum_probs=98.6
Q ss_pred CEEEEeccCCcEEEEECCC-Cccc-eEeeccc-cc---CCccee--eEEeeeeeEEEEEecCCCceeeeeecCCCCCcce
Q 039692 49 GVVYFPSWNGYLYAVNAFN-GALI-WEQNLSK-LT---GLSGTG--IVVNVTVAVVVAVSRSNGELVWSTQIDPRPRSQI 120 (417)
Q Consensus 49 g~v~v~~~~g~l~ald~~t-G~~~-W~~~~~~-~~---~~~p~~--~v~~~~v~~l~ald~~tG~~~W~~~~~~~~~~~~ 120 (417)
..++.++.++.|+.+|.++ ++.+ -...... .+ ..+|.+ ++.....+.+..+|..+++.+......... ..+
T Consensus 55 ~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~v-~~~ 133 (368)
T 3mmy_A 55 NFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLSSNQAIQIAQHDAPV-KTI 133 (368)
T ss_dssp EEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSSCE-EEE
T ss_pred eEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcCCCcEEEEEcCCCCceeeccccCce-EEE
Confidence 3566777889999999987 5443 2222111 11 111211 111122388999999999887654422211 111
Q ss_pred eeceeEEcCe-EEEEeCCccCccccCcccCCCceEEEEeCCCCceeceeeecCCCCCCCCCCCCccccCCCceeecccCc
Q 039692 121 TMSGSVYMGA-FYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYSGAAVWGSSPAIDVIRRQ 199 (417)
Q Consensus 121 ~~sp~v~~~~-v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~~gg~~~~~~pa~d~~~~~ 199 (417)
...| --++. ++.+.. ++.|..+|.++++.+.++..... ...++...
T Consensus 134 ~~~~-~~~~~~l~~~~~--------------dg~i~vwd~~~~~~~~~~~~~~~----------------~~~~~~~~-- 180 (368)
T 3mmy_A 134 HWIK-APNYSCVMTGSW--------------DKTLKFWDTRSSNPMMVLQLPER----------------CYCADVIY-- 180 (368)
T ss_dssp EEEE-CSSCEEEEEEET--------------TSEEEEECSSCSSCSEEEECSSC----------------EEEEEEET--
T ss_pred EEEe-CCCCCEEEEccC--------------CCcEEEEECCCCcEEEEEecCCC----------------ceEEEecC--
Confidence 1100 01444 444444 68999999999999888775321 01111110
Q ss_pred ccCCCCCCCCCCCCcccCCCCCCeEEEEECCCCceEEEecCCCCcceeeeccCCCCCCCCCCCCCCCccCCCceEEEEec
Q 039692 200 KQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTIST 279 (417)
Q Consensus 200 ~~~~~~~~p~~~~~~v~~~~~~~~l~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~p~v~~~~~ 279 (417)
..+.....++.+..+|.++....++........ ......+..
T Consensus 181 -------------~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~-------------------------~~~~~~~~~ 222 (368)
T 3mmy_A 181 -------------PMAVVATAERGLIVYQLENQPSEFRRIESPLKH-------------------------QHRCVAIFK 222 (368)
T ss_dssp -------------TEEEEEEGGGCEEEEECSSSCEEEEECCCSCSS-------------------------CEEEEEEEE
T ss_pred -------------CeeEEEeCCCcEEEEEeccccchhhhccccccC-------------------------CCceEEEcc
Confidence 112234456778888888877766554432210 001111111
Q ss_pred CCe-eeeEEEEEcccceEEEEECCCC
Q 039692 280 NGR-FRDVVVAVQKSGFAWAFDRDSG 304 (417)
Q Consensus 280 ~G~-~~~~v~~~~~~G~l~ald~~tG 304 (417)
++. ....++.++.+|.+...|..++
T Consensus 223 ~~~~~~~~~~~~~~dg~i~i~~~~~~ 248 (368)
T 3mmy_A 223 DKQNKPTGFALGSIEGRVAIHYINPP 248 (368)
T ss_dssp CTTSCEEEEEEEETTSEEEEEESSCS
T ss_pred cCCCCCCeEEEecCCCcEEEEecCCC
Confidence 110 1233777889999999999887
No 109
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=96.82 E-value=0.2 Score=46.81 Aligned_cols=226 Identities=9% Similarity=-0.068 Sum_probs=115.6
Q ss_pred CCEEEEeccCCcEEEEECCCCc--cceEeeccc-ccC---Cccee--eEEeeeeeEEEEEecCCCceeeeeecCCCCC--
Q 039692 48 NGVVYFPSWNGYLYAVNAFNGA--LIWEQNLSK-LTG---LSGTG--IVVNVTVAVVVAVSRSNGELVWSTQIDPRPR-- 117 (417)
Q Consensus 48 ~g~v~v~~~~g~l~ald~~tG~--~~W~~~~~~-~~~---~~p~~--~v~~~~v~~l~ald~~tG~~~W~~~~~~~~~-- 117 (417)
+..+++++.++.|+.+|.++++ .+-++.... .+. .+|.+ ++.....+.++.+|.++++..-.........
T Consensus 20 ~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~v 99 (372)
T 1k8k_C 20 RTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAA 99 (372)
T ss_dssp SSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTEEEEEEECCCCSSCE
T ss_pred CCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECCCCeeeeeEEeecCCCce
Confidence 3467777789999999998887 555554321 110 11110 1111122778888888887655554322111
Q ss_pred cceeeceeEEcCeEEEEeCCccCccccCcccCCCceEEEEeCCCCceeceeeecCCCCCCCCCCCCccccCCCceeeccc
Q 039692 118 SQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYSGAAVWGSSPAIDVIR 197 (417)
Q Consensus 118 ~~~~~sp~v~~~~v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~~gg~~~~~~pa~d~~~ 197 (417)
..+..+| .+..++++.. ++.+..+|.++++..+.......... ..+. ..++.++
T Consensus 100 ~~~~~~~--~~~~l~~~~~--------------d~~v~i~d~~~~~~~~~~~~~~~~~~-------~~i~--~~~~~~~- 153 (372)
T 1k8k_C 100 RCVRWAP--NEKKFAVGSG--------------SRVISICYFEQENDWWVCKHIKKPIR-------STVL--SLDWHPN- 153 (372)
T ss_dssp EEEEECT--TSSEEEEEET--------------TSSEEEEEEETTTTEEEEEEECTTCC-------SCEE--EEEECTT-
T ss_pred eEEEECC--CCCEEEEEeC--------------CCEEEEEEecCCCcceeeeeeecccC-------CCee--EEEEcCC-
Confidence 1112222 1334555554 57888888887776554433211100 0000 1122211
Q ss_pred CcccCCCCCCCCCCCCcccCCCCCCeEEEEECC------------------CCceEEEecCCCCcceeeeccCCCCCCCC
Q 039692 198 RQKQNNQTTKPTHPDQCISSDIYANSIVALDID------------------SGRIAWAKPLGGYDIFYFTCLVPNNPDCP 259 (417)
Q Consensus 198 ~~~~~~~~~~p~~~~~~v~~~~~~~~l~ald~~------------------tG~~~W~~~~~~~~~~~~~~~~~~~~~c~ 259 (417)
...+..+..++.+..+|.+ +++.+-.+.....
T Consensus 154 --------------~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------- 203 (372)
T 1k8k_C 154 --------------SVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCG---------------- 203 (372)
T ss_dssp --------------SSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSS----------------
T ss_pred --------------CCEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCC----------------
Confidence 1223344556777777743 4444443332111
Q ss_pred CCCCCCCccCCCceEEEEecCCeeeeEEEEEcccceEEEEECCCCcEEEEeecCCCCCCCcceecccc-cCCeEEEEecc
Q 039692 260 PGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDIIWFKLAGPGGREGGGVWGAAT-DGRRVYTNIVN 338 (417)
Q Consensus 260 ~~~~~~~~~~~~p~v~~~~~~G~~~~~v~~~~~~G~l~ald~~tG~~lW~~~~~~~~~~g~~~~~~~~-~~~~vy~~~~~ 338 (417)
...-.....+ ++.|+.++.+|.++.+|..+++.+....... .....++. .++.+++...+
T Consensus 204 -----------~v~~~~~~~~---~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~-----~~v~~~~~~~~~~~l~~~~d 264 (372)
T 1k8k_C 204 -----------WVHGVCFSAN---GSRVAWVSHDSTVCLADADKKMAVATLASET-----LPLLAVTFITESSLVAAGHD 264 (372)
T ss_dssp -----------CEEEEEECSS---SSEEEEEETTTEEEEEEGGGTTEEEEEECSS-----CCEEEEEEEETTEEEEEETT
T ss_pred -----------eEEEEEECCC---CCEEEEEeCCCEEEEEECCCCceeEEEccCC-----CCeEEEEEecCCCEEEEEeC
Confidence 0111112223 3578888999999999999999988877421 11122222 23444444455
Q ss_pred CCceeeeecC
Q 039692 339 NDRIIWSTAD 348 (417)
Q Consensus 339 ~~~~~W~~~~ 348 (417)
+.-.+|....
T Consensus 265 ~~i~i~~~~~ 274 (372)
T 1k8k_C 265 CFPVLFTYDS 274 (372)
T ss_dssp SSCEEEEEET
T ss_pred CeEEEEEccC
Confidence 5567787765
No 110
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=96.81 E-value=0.045 Score=51.07 Aligned_cols=107 Identities=4% Similarity=-0.109 Sum_probs=64.7
Q ss_pred CCEEEEeccCCcEEEEECCCCccceEeecccc------cC---Ccce------eeEEeeeeeEEEEEecCCCceeeeeec
Q 039692 48 NGVVYFPSWNGYLYAVNAFNGALIWEQNLSKL------TG---LSGT------GIVVNVTVAVVVAVSRSNGELVWSTQI 112 (417)
Q Consensus 48 ~g~v~v~~~~g~l~ald~~tG~~~W~~~~~~~------~~---~~p~------~~v~~~~v~~l~ald~~tG~~~W~~~~ 112 (417)
+..+++++.++.|..+|..+++.+........ +. .+|. -++..+..+.+..+|..+++.+.....
T Consensus 34 ~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~ 113 (366)
T 3k26_A 34 DPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVG 113 (366)
T ss_dssp SCEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEETTCEEEEECTTTCCEEEEEES
T ss_pred CceEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEecCCCEEEEEEchhceEeeeecC
Confidence 34577777788999999998888766553211 10 0111 011111238999999999999888773
Q ss_pred CCCCCcceeeceeEEcCeEEEEeCCccCccccCcccCCCceEEEEeCCCCceeceee
Q 039692 113 DPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTY 169 (417)
Q Consensus 113 ~~~~~~~~~~sp~v~~~~v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~~~W~~~ 169 (417)
.......+..+|. .+..++.+.. ++.|..+|.++++.+..+.
T Consensus 114 ~~~~i~~~~~~~~-~~~~l~s~~~--------------dg~i~iwd~~~~~~~~~~~ 155 (366)
T 3k26_A 114 HGNAINELKFHPR-DPNLLLSVSK--------------DHALRLWNIQTDTLVAIFG 155 (366)
T ss_dssp CCSCEEEEEECSS-CTTEEEEEET--------------TSCEEEEETTTTEEEEEEC
T ss_pred CCCcEEEEEECCC-CCCEEEEEeC--------------CCeEEEEEeecCeEEEEec
Confidence 3221111222220 1234555554 6899999999998887764
No 111
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=96.77 E-value=0.31 Score=51.53 Aligned_cols=193 Identities=7% Similarity=0.009 Sum_probs=94.7
Q ss_pred CCEEEEeccCCcEEEEECCCCccceEee-------cc-c--ccCCcce-eeEE--eee------eeEEEEEecCCCceee
Q 039692 48 NGVVYFPSWNGYLYAVNAFNGALIWEQN-------LS-K--LTGLSGT-GIVV--NVT------VAVVVAVSRSNGELVW 108 (417)
Q Consensus 48 ~g~v~v~~~~g~l~ald~~tG~~~W~~~-------~~-~--~~~~~p~-~~v~--~~~------v~~l~ald~~tG~~~W 108 (417)
+|.|++++..+.|+.+|.++++...-.. .. . ......+ .+.. ++. .+.|+.++..+++...
T Consensus 268 ~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~f~~~~~~~~~~~l~~~~v~~i~~D~~g~lWigt~~~Gl~~~~~~~~~~~~ 347 (781)
T 3v9f_A 268 DNKLWIATELNGIMILDLQQNQFLLPEQIRFEFIREGDNNYSLSNASARYIFQDSFNNIWIGTWGGGINFISNAPPTFHT 347 (781)
T ss_dssp TSEEEEEESSSCEEEEETTCC---------CEEECBCSSTTSBSSSCEEEEEECSSCCEEEEEBSSCEEEECSSCCSCEE
T ss_pred CCCEEEEeCCCCeEEECCCCCeeeeeeccccccccCCCCCCCCCCCeEEEEEEeCCCCEEEEecCCeEEEeCCCCCccee
Confidence 6799999986789999998877543222 11 0 1111111 1111 111 1668888887766544
Q ss_pred eeec-----CCCCCcceeeceeEE-cCeEEEEeCCccCccccCcccCCCceEEEEeCCCCceeceeeecCCCCCCCCCCC
Q 039692 109 STQI-----DPRPRSQITMSGSVY-MGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYS 182 (417)
Q Consensus 109 ~~~~-----~~~~~~~~~~sp~v~-~~~v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~~ 182 (417)
-... ..........+.... ++.+++|+.+ +.|+.+|+.+++..+-. .+....
T Consensus 348 ~~~~~~~~~~~~l~~~~v~~i~~d~~g~lWigt~~--------------~Gl~~~~~~~~~~~~~~--~~~~~~------ 405 (781)
T 3v9f_A 348 WSYSPTQMNESSLSNKVVSSVCDDGQGKLWIGTDG--------------GGINVFENGKRVAIYNK--ENRELL------ 405 (781)
T ss_dssp EC----CCCSSCCSSSCEEEEEECTTSCEEEEEBS--------------SCEEEEETTEEEEECC-------CC------
T ss_pred eccCccccccCCCCCcceEEEEEcCCCCEEEEeCC--------------CcEEEEECCCCeEEEcc--CCCCCC------
Confidence 3211 001011111122222 4789999863 67999999876544321 111000
Q ss_pred CccccCCCceeecccCcccCCCCCCCCCCCCcccCCCCCCeEEEEECCCCceEEEecCCCCcceeeeccCCCCCCCCCCC
Q 039692 183 GAAVWGSSPAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGP 262 (417)
Q Consensus 183 gg~~~~~~pa~d~~~~~~~~~~~~~p~~~~~~v~~~~~~~~l~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~c~~~~ 262 (417)
...++ ....|. ++.+..++..+.|+.+|+++++..........
T Consensus 406 ~~~v~--~i~~d~----------------~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~------------------- 448 (781)
T 3v9f_A 406 SNSVL--CSLKDS----------------EGNLWFGTYLGNISYYNTRLKKFQIIELEKNE------------------- 448 (781)
T ss_dssp CSBEE--EEEECT----------------TSCEEEEETTEEEEEECSSSCEEEECCSTTTC-------------------
T ss_pred CcceE--EEEECC----------------CCCEEEEeccCCEEEEcCCCCcEEEeccCCCC-------------------
Confidence 01111 111111 23344555667899999998876542211000
Q ss_pred CCCCccCCCceEEEEecCCeeeeEEEEEcccceEEEEECCCCcEEEEe
Q 039692 263 NLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDIIWFK 310 (417)
Q Consensus 263 ~~~~~~~~~p~v~~~~~~G~~~~~v~~~~~~G~l~ald~~tG~~lW~~ 310 (417)
...+..+..+. ++.|++++. +.|+.+|.++++.....
T Consensus 449 --------~~~v~~i~~d~--~g~lwigt~-~Gl~~~~~~~~~~~~~~ 485 (781)
T 3v9f_A 449 --------LLDVRVFYEDK--NKKIWIGTH-AGVFVIDLASKKVIHHY 485 (781)
T ss_dssp --------CCCEEEEEECT--TSEEEEEET-TEEEEEESSSSSCCEEE
T ss_pred --------CCeEEEEEECC--CCCEEEEEC-CceEEEeCCCCeEEecc
Confidence 01112222222 356888887 56999999988765544
No 112
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=96.76 E-value=0.068 Score=51.34 Aligned_cols=106 Identities=11% Similarity=0.092 Sum_probs=63.6
Q ss_pred CCEEEEeccCCcEEEEECCCCcc-------ceEeeccc-cc---CCccee---eEEeeeeeEEEEEecCCCceeeeee--
Q 039692 48 NGVVYFPSWNGYLYAVNAFNGAL-------IWEQNLSK-LT---GLSGTG---IVVNVTVAVVVAVSRSNGELVWSTQ-- 111 (417)
Q Consensus 48 ~g~v~v~~~~g~l~ald~~tG~~-------~W~~~~~~-~~---~~~p~~---~v~~~~v~~l~ald~~tG~~~W~~~-- 111 (417)
+..++.++.++.|..+|..+++. +-.+.... .+ ..+|.+ ++..+..+.+..+|..+++.+.+..
T Consensus 94 ~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~ 173 (402)
T 2aq5_A 94 DNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPD 173 (402)
T ss_dssp TTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTT
T ss_pred CCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecC
Confidence 34777778899999999998843 33333221 11 111211 1112233889999999999888773
Q ss_pred cCCCCCcceeeceeEEcCeEEEEeCCccCccccCcccCCCceEEEEeCCCCceeceee
Q 039692 112 IDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTY 169 (417)
Q Consensus 112 ~~~~~~~~~~~sp~v~~~~v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~~~W~~~ 169 (417)
........+..+| .+..++++.. ++.|..+|.++++.+.++.
T Consensus 174 ~~~~~v~~~~~~~--~~~~l~~~~~--------------d~~i~iwd~~~~~~~~~~~ 215 (402)
T 2aq5_A 174 VHPDTIYSVDWSR--DGALICTSCR--------------DKRVRVIEPRKGTVVAEKD 215 (402)
T ss_dssp TCCSCEEEEEECT--TSSCEEEEET--------------TSEEEEEETTTTEEEEEEE
T ss_pred CCCCceEEEEECC--CCCEEEEEec--------------CCcEEEEeCCCCceeeeec
Confidence 2111111122233 2334555554 6899999999999988763
No 113
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=96.75 E-value=0.03 Score=53.22 Aligned_cols=144 Identities=8% Similarity=-0.021 Sum_probs=81.0
Q ss_pred CEEEEeccCCcEEEEECCCCccceEeeccc-cc---CCccee--e-EEeeeeeEEEEEecCCCceeeeeecCCCCCc--c
Q 039692 49 GVVYFPSWNGYLYAVNAFNGALIWEQNLSK-LT---GLSGTG--I-VVNVTVAVVVAVSRSNGELVWSTQIDPRPRS--Q 119 (417)
Q Consensus 49 g~v~v~~~~g~l~ald~~tG~~~W~~~~~~-~~---~~~p~~--~-v~~~~v~~l~ald~~tG~~~W~~~~~~~~~~--~ 119 (417)
..|+.++.++.|...|.++|+.+-.+.-.. .+ ..+|.+ + +.....+.+...|..+++..-+......... .
T Consensus 140 ~~l~sgs~d~~i~iwd~~~~~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~ 219 (344)
T 4gqb_B 140 TQAVSGSKDICIKVWDLAQQVVLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTS 219 (344)
T ss_dssp SEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEE
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEEcCcCCceEEEEecCCCCCceeeeccccccccccccccceeeeeecceeecccee
Confidence 467777889999999999999887665432 11 111111 1 1222337888899999988766653221110 1
Q ss_pred eeeceeEEcCeEEE-EeCCccCccccCcccCCCceEEEEeCCCCceeceeeecCCCCCCCCCCCCccccCCCceeecccC
Q 039692 120 ITMSGSVYMGAFYV-GLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYSGAAVWGSSPAIDVIRR 198 (417)
Q Consensus 120 ~~~sp~v~~~~v~v-~~~~~~~~~~~~~~~~~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~~gg~~~~~~pa~d~~~~ 198 (417)
+...| .++.+++ +.. ++.|..+|.++|+.+.++..... .+. ..++.++.
T Consensus 220 ~~~~p--~~~~~l~sg~~--------------dg~v~~wd~~~~~~~~~~~~h~~-----------~v~--~v~fsp~g- 269 (344)
T 4gqb_B 220 LAWHP--QQSEVFVFGDE--------------NGTVSLVDTKSTSCVLSSAVHSQ-----------CVT--GLVFSPHS- 269 (344)
T ss_dssp EEECS--SCTTEEEEEET--------------TSEEEEEESCC--CCEEEECCSS-----------CEE--EEEECSSS-
T ss_pred eeecC--CCCcceEEecc--------------CCcEEEEECCCCcEEEEEcCCCC-----------CEE--EEEEccCC-
Confidence 11111 1444444 443 68999999999998877654211 010 12222211
Q ss_pred cccCCCCCCCCCCCCcccCCCCCCeEEEEECCCCceE
Q 039692 199 QKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIA 235 (417)
Q Consensus 199 ~~~~~~~~~p~~~~~~v~~~~~~~~l~ald~~tG~~~ 235 (417)
...+..++.++.|..+|.++|+++
T Consensus 270 -------------~~~lasgs~D~~i~vwd~~~~~~~ 293 (344)
T 4gqb_B 270 -------------VPFLASLSEDCSLAVLDSSLSELF 293 (344)
T ss_dssp -------------SCCEEEEETTSCEEEECTTCCEEE
T ss_pred -------------CeEEEEEeCCCeEEEEECCCCcEE
Confidence 112345567889999999998865
No 114
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=96.66 E-value=0.2 Score=48.50 Aligned_cols=205 Identities=9% Similarity=-0.054 Sum_probs=109.2
Q ss_pred CCEEEEeccCCcEEEEECCCCccceEeeccc-cc---CCccee--eEEeeeeeEEEEEecCCCceeeeeecCCCCCccee
Q 039692 48 NGVVYFPSWNGYLYAVNAFNGALIWEQNLSK-LT---GLSGTG--IVVNVTVAVVVAVSRSNGELVWSTQIDPRPRSQIT 121 (417)
Q Consensus 48 ~g~v~v~~~~g~l~ald~~tG~~~W~~~~~~-~~---~~~p~~--~v~~~~v~~l~ald~~tG~~~W~~~~~~~~~~~~~ 121 (417)
+..++.++.++.|..+|.++++.+-.+.... .+ ..+|.+ ++..+..+.+...|..+|+.+-++.........+.
T Consensus 162 ~~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~ 241 (410)
T 1vyh_C 162 GKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVR 241 (410)
T ss_dssp SSEEEEEETTSCCCEEETTSSCEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEE
T ss_pred CCEEEEEeCCCeEEEEeCCCCceeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEeCCCccEEEEE
Confidence 3467777788999999988887654443221 11 011111 11222338899999999988766553221111111
Q ss_pred eceeEEcCeEEEEeCCccCccccCcccCCCceEEEEeCCCCceeceeeecCCCCCCCCCCCCccccCCCceeecccCccc
Q 039692 122 MSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYSGAAVWGSSPAIDVIRRQKQ 201 (417)
Q Consensus 122 ~sp~v~~~~v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~~gg~~~~~~pa~d~~~~~~~ 201 (417)
.+| ++.+++..+. ++.|..+|..+++.+=.+...... + ...++.+......
T Consensus 242 ~~~---~g~~l~s~s~-------------D~~v~vwd~~~~~~~~~~~~h~~~-----------v--~~~~~~~~~~~~~ 292 (410)
T 1vyh_C 242 PNQ---DGTLIASCSN-------------DQTVRVWVVATKECKAELREHRHV-----------V--ECISWAPESSYSS 292 (410)
T ss_dssp ECT---TSSEEEEEET-------------TSCEEEEETTTCCEEEEECCCSSC-----------E--EEEEECCSCGGGG
T ss_pred ECC---CCCEEEEEcC-------------CCeEEEEECCCCceeeEecCCCce-----------E--EEEEEcCcccccc
Confidence 122 4444433332 689999999988766443321100 0 0111222111000
Q ss_pred -----CCCCCCCCCCCCcccCCCCCCeEEEEECCCCceEEEecCCCCcceeeeccCCCCCCCCCCCCCCCccCCCceEEE
Q 039692 202 -----NNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLT 276 (417)
Q Consensus 202 -----~~~~~~p~~~~~~v~~~~~~~~l~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~p~v~~ 276 (417)
.............+..++.++.+..+|.++|+.+-.+....... .-..
T Consensus 293 ~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~v---------------------------~~v~ 345 (410)
T 1vyh_C 293 ISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWV---------------------------RGVL 345 (410)
T ss_dssp GGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEEEECCSSCE---------------------------EEEE
T ss_pred hhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCceEEEEECCCCcE---------------------------EEEE
Confidence 00000000112345566778899999999999887665322110 0011
Q ss_pred EecCCeeeeEEEEEcccceEEEEECCCCcEEEEee
Q 039692 277 ISTNGRFRDVVVAVQKSGFAWAFDRDSGDIIWFKL 311 (417)
Q Consensus 277 ~~~~G~~~~~v~~~~~~G~l~ald~~tG~~lW~~~ 311 (417)
+..+ +..|+.++.||.++..|..+++.+-...
T Consensus 346 ~~~~---g~~l~s~s~D~~i~vwd~~~~~~~~~~~ 377 (410)
T 1vyh_C 346 FHSG---GKFILSCADDKTLRVWDYKNKRCMKTLN 377 (410)
T ss_dssp ECSS---SSCEEEEETTTEEEEECCTTSCCCEEEE
T ss_pred EcCC---CCEEEEEeCCCeEEEEECCCCceEEEEc
Confidence 1223 3578888999999999999998776655
No 115
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=96.64 E-value=0.13 Score=47.73 Aligned_cols=103 Identities=8% Similarity=-0.102 Sum_probs=63.8
Q ss_pred EEEEeccCCcEEEEECCCCccceEeeccc-ccC---Ccc-e--eeEEeeeeeEEEEEecCCCceeeeeec---CCCCCcc
Q 039692 50 VVYFPSWNGYLYAVNAFNGALIWEQNLSK-LTG---LSG-T--GIVVNVTVAVVVAVSRSNGELVWSTQI---DPRPRSQ 119 (417)
Q Consensus 50 ~v~v~~~~g~l~ald~~tG~~~W~~~~~~-~~~---~~p-~--~~v~~~~v~~l~ald~~tG~~~W~~~~---~~~~~~~ 119 (417)
.++.++.++.|..+|.++++.+.++.... .+. .+| . -++.....+.|+.+|..+++.+..... .......
T Consensus 87 ~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~ 166 (366)
T 3k26_A 87 LLAVAGSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLS 166 (366)
T ss_dssp EEEEEETTCEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSCEEE
T ss_pred EEEEecCCCEEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccCceeE
Confidence 57777889999999999999988876432 111 122 1 011122238899999999998877642 1111111
Q ss_pred eeeceeEEcCeEEEEeCCccCccccCcccCCCceEEEEeCCCCceecee
Q 039692 120 ITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQT 168 (417)
Q Consensus 120 ~~~sp~v~~~~v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~~~W~~ 168 (417)
+..+| .+..++.+.. ++.|..+|.++++.+-.+
T Consensus 167 ~~~~~--~~~~l~~~~~--------------dg~i~i~d~~~~~~~~~~ 199 (366)
T 3k26_A 167 ADYDL--LGEKIMSCGM--------------DHSLKLWRINSKRMMNAI 199 (366)
T ss_dssp EEECT--TSSEEEEEET--------------TSCEEEEESCSHHHHHHH
T ss_pred EEECC--CCCEEEEecC--------------CCCEEEEECCCCcccccc
Confidence 22223 1334555554 689999999988776543
No 116
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=96.63 E-value=0.094 Score=51.31 Aligned_cols=68 Identities=12% Similarity=-0.036 Sum_probs=44.9
Q ss_pred ccCCCCCCeEEEEECCCCceEEEecCCCCcceeeeccCCCCCCCCCCCCCCCccCCCceEEEEecCCeeeeEEEEEcccc
Q 039692 215 ISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSG 294 (417)
Q Consensus 215 v~~~~~~~~l~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~p~v~~~~~~G~~~~~v~~~~~~G 294 (417)
++.+..++.+..+|..+++.+-.+..+.. .+ +..+... .++.|+.++.|+
T Consensus 213 l~s~~~d~~i~vwd~~~~~~~~~~~~~h~---------------------------~~-v~~~~~s--d~~~l~s~~~d~ 262 (450)
T 2vdu_B 213 IITSDRDEHIKISHYPQCFIVDKWLFGHK---------------------------HF-VSSICCG--KDYLLLSAGGDD 262 (450)
T ss_dssp EEEEETTSCEEEEEESCTTCEEEECCCCS---------------------------SC-EEEEEEC--STTEEEEEESSS
T ss_pred EEEEcCCCcEEEEECCCCceeeeeecCCC---------------------------Cc-eEEEEEC--CCCEEEEEeCCC
Confidence 44555677888888888887765432221 11 1111222 146788889999
Q ss_pred eEEEEECCCCcEEEEeec
Q 039692 295 FAWAFDRDSGDIIWFKLA 312 (417)
Q Consensus 295 ~l~ald~~tG~~lW~~~~ 312 (417)
.+...|..+|+.+-....
T Consensus 263 ~v~vwd~~~~~~~~~~~~ 280 (450)
T 2vdu_B 263 KIFAWDWKTGKNLSTFDY 280 (450)
T ss_dssp EEEEEETTTCCEEEEEEC
T ss_pred eEEEEECCCCcEeeeecc
Confidence 999999999998877763
No 117
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=96.63 E-value=0.4 Score=44.74 Aligned_cols=157 Identities=11% Similarity=0.003 Sum_probs=86.7
Q ss_pred CCEEEEecc-CCcEEEEECCCCc--cceEeeccc------ccCCcceeeEE---ee--------eeeEEEEEecCCCcee
Q 039692 48 NGVVYFPSW-NGYLYAVNAFNGA--LIWEQNLSK------LTGLSGTGIVV---NV--------TVAVVVAVSRSNGELV 107 (417)
Q Consensus 48 ~g~v~v~~~-~g~l~ald~~tG~--~~W~~~~~~------~~~~~p~~~v~---~~--------~v~~l~ald~~tG~~~ 107 (417)
++.+|+++. ++.|+.+|+ +|+ .+..+.... .....|.++.. ++ ..+.|+.+| .+|+.+
T Consensus 101 ~g~l~v~d~~~~~v~~~~~-~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~-~~g~~~ 178 (329)
T 3fvz_A 101 DGNYWVTDVALHQVFKLDP-HSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFS-PSGKFV 178 (329)
T ss_dssp TSCEEEEETTTTEEEEECT-TCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEEC-TTSCEE
T ss_pred CCCEEEEECCCCEEEEEeC-CCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEc-CCCCEE
Confidence 677888764 688999997 566 455543211 00112433322 12 127888898 678888
Q ss_pred eeeecCCCC----Ccce--eeceeEE-c-CeEEEEeCCccCccccCcccCCCceEEEEeCCCCceeceeeecCCCCCCCC
Q 039692 108 WSTQIDPRP----RSQI--TMSGSVY-M-GAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNGGKRG 179 (417)
Q Consensus 108 W~~~~~~~~----~~~~--~~sp~v~-~-~~v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~~~W~~~~~~~~~~~~~ 179 (417)
+........ ...+ ....++. + +.+|+.... +++|..+|+++|+.+.++.......
T Consensus 179 ~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~-------------~~~I~~~~~~~G~~~~~~~~~~~~~---- 241 (329)
T 3fvz_A 179 TQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRE-------------NGRIQCFKTDTKEFVREIKHASFGR---- 241 (329)
T ss_dssp EEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETT-------------TTEEEEEETTTCCEEEEECCTTTTT----
T ss_pred EEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECC-------------CCEEEEEECCCCcEEEEEeccccCC----
Confidence 877532211 0001 1122233 3 789998764 6899999999999987765422111
Q ss_pred CCCCccccCCCceeecccCcccCCCCCCCCCCCCcccC-CCCCCeEEEEECCCCceEEEecC
Q 039692 180 GYSGAAVWGSSPAIDVIRRQKQNNQTTKPTHPDQCISS-DIYANSIVALDIDSGRIAWAKPL 240 (417)
Q Consensus 180 ~~~gg~~~~~~pa~d~~~~~~~~~~~~~p~~~~~~v~~-~~~~~~l~ald~~tG~~~W~~~~ 240 (417)
..+ ..++.+ +.. +..++.++. ......++.+|..+|+++-.+..
T Consensus 242 -----~~~--~~~~~p--g~~--------~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~ 286 (329)
T 3fvz_A 242 -----NVF--AISYIP--GFL--------FAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKP 286 (329)
T ss_dssp -----CEE--EEEEET--TEE--------EEEECCCCTTCSCCCCEEEEETTTCCEEEEECC
T ss_pred -----Ccc--eeeecC--CEE--------EEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcC
Confidence 111 112222 100 000111222 23456899999999999887653
No 118
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=96.62 E-value=0.12 Score=52.07 Aligned_cols=193 Identities=9% Similarity=-0.065 Sum_probs=104.8
Q ss_pred CEEEEeccCCcEEEEECCCC--------ccceEeeccc-cc---CCccee--eEEeee----eeEEEEEecCCCceeeee
Q 039692 49 GVVYFPSWNGYLYAVNAFNG--------ALIWEQNLSK-LT---GLSGTG--IVVNVT----VAVVVAVSRSNGELVWST 110 (417)
Q Consensus 49 g~v~v~~~~g~l~ald~~tG--------~~~W~~~~~~-~~---~~~p~~--~v~~~~----v~~l~ald~~tG~~~W~~ 110 (417)
..++.++.++.|..+|.++| +.+-++.... .+ ..+|.+ ++..+. .+.++.+| +++.+...
T Consensus 79 ~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d--~~~~~~~~ 156 (615)
T 1pgu_A 79 QYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWD--SGNSLGEV 156 (615)
T ss_dssp CEEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETT--TCCEEEEC
T ss_pred CEEEEecCCCEEEEEeCCCCcccccccccccchhhcccccEEEEEEeCCCCEEEEeccCCCCccEEEEEE--CCCcceee
Confidence 35666677888888888766 3333333211 10 011110 011110 14666666 56666555
Q ss_pred ecCCCCCcceeeceeEEcC--eEEEEeCCccCccccCcccCCCceEEEEeCCCCceeceeeecCCCCCCCCCCCCccccC
Q 039692 111 QIDPRPRSQITMSGSVYMG--AFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYSGAAVWG 188 (417)
Q Consensus 111 ~~~~~~~~~~~~sp~v~~~--~v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~~gg~~~~ 188 (417)
.........+..+| ++ .++.+.. ++.|..+|..+++.+.++...... +..+.
T Consensus 157 ~~~~~~v~~~~~~~---~~~~~l~~~~~--------------d~~v~vwd~~~~~~~~~~~~~~~~--------~~~v~- 210 (615)
T 1pgu_A 157 SGHSQRINACHLKQ---SRPMRSMTVGD--------------DGSVVFYQGPPFKFSASDRTHHKQ--------GSFVR- 210 (615)
T ss_dssp CSCSSCEEEEEECS---SSSCEEEEEET--------------TTEEEEEETTTBEEEEEECSSSCT--------TCCEE-
T ss_pred ecCCccEEEEEECC---CCCcEEEEEeC--------------CCcEEEEeCCCcceeeeecccCCC--------CceEE-
Confidence 43221111122222 33 4555554 689999999999988776542110 00111
Q ss_pred CCceeecccCcccCCCCCCCCCCCCcccCCCCCCeEEEEECCCCceEEEecCC--CCcceeeeccCCCCCCCCCCCCCCC
Q 039692 189 SSPAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLG--GYDIFYFTCLVPNNPDCPPGPNLDA 266 (417)
Q Consensus 189 ~~pa~d~~~~~~~~~~~~~p~~~~~~v~~~~~~~~l~ald~~tG~~~W~~~~~--~~~~~~~~~~~~~~~~c~~~~~~~~ 266 (417)
..++.++. ...+..+..++.+..+|.++|+.+..+... .+.
T Consensus 211 -~~~~~~~~--------------~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~---------------------- 253 (615)
T 1pgu_A 211 -DVEFSPDS--------------GEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQ---------------------- 253 (615)
T ss_dssp -EEEECSTT--------------CCEEEEEETTCCEEEEETTTCCEEEECCBTTBCCC----------------------
T ss_pred -EEEECCCC--------------CCEEEEEeCCCeEEEEECCCCCEeEEecccccccC----------------------
Confidence 12333220 123445566789999999999998877321 111
Q ss_pred ccCCCceEEEEecCCeeeeEEEEEcccceEEEEECCCCcEEEEeecC
Q 039692 267 DFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDIIWFKLAG 313 (417)
Q Consensus 267 ~~~~~p~v~~~~~~G~~~~~v~~~~~~G~l~ald~~tG~~lW~~~~~ 313 (417)
.++ ..+... .+..++.++.+|.+...|..+++.+......
T Consensus 254 ----~~v-~~~~~~--~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~ 293 (615)
T 1pgu_A 254 ----GGI-FALSWL--DSQKFATVGADATIRVWDVTTSKCVQKWTLD 293 (615)
T ss_dssp ----SCE-EEEEES--SSSEEEEEETTSEEEEEETTTTEEEEEEECC
T ss_pred ----Cce-EEEEEc--CCCEEEEEcCCCcEEEEECCCCcEEEEEcCC
Confidence 111 112222 1467888889999999999999998888753
No 119
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=96.58 E-value=0.09 Score=48.66 Aligned_cols=96 Identities=16% Similarity=0.139 Sum_probs=52.1
Q ss_pred CCEEEEeccCCcEEEEECCCCc----cceEeecccccC---Cccee---eEEeeeeeEEEEEec-CCCceeeeeec--CC
Q 039692 48 NGVVYFPSWNGYLYAVNAFNGA----LIWEQNLSKLTG---LSGTG---IVVNVTVAVVVAVSR-SNGELVWSTQI--DP 114 (417)
Q Consensus 48 ~g~v~v~~~~g~l~ald~~tG~----~~W~~~~~~~~~---~~p~~---~v~~~~v~~l~ald~-~tG~~~W~~~~--~~ 114 (417)
+..++.++.++.|..+|..+++ .+........+. .+|.+ ++..+..+.++.+|. ++++.. .... ..
T Consensus 23 ~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~-~~~~~~~~ 101 (342)
T 1yfq_A 23 KSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPSFQ-ALTNNEAN 101 (342)
T ss_dssp GTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEECSSSSSSEE-ECBSCCCC
T ss_pred CCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEEEEeccCCceE-eccccCCC
Confidence 4567788889999999998887 443332222111 01110 011112278888888 777652 2221 11
Q ss_pred CCCcceeeceeEEcCeEEEEeCCccCccccCcccCCCceEEEEeCCC
Q 039692 115 RPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRN 161 (417)
Q Consensus 115 ~~~~~~~~sp~v~~~~v~v~~~~~~~~~~~~~~~~~~g~l~ald~~t 161 (417)
.....+..+| +..++.+.. ++.|..+|.++
T Consensus 102 ~~v~~l~~~~---~~~l~s~~~--------------d~~i~iwd~~~ 131 (342)
T 1yfq_A 102 LGICRICKYG---DDKLIAASW--------------DGLIEVIDPRN 131 (342)
T ss_dssp SCEEEEEEET---TTEEEEEET--------------TSEEEEECHHH
T ss_pred CceEEEEeCC---CCEEEEEcC--------------CCeEEEEcccc
Confidence 1111122233 566666665 58899999876
No 120
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=96.56 E-value=0.16 Score=53.70 Aligned_cols=102 Identities=9% Similarity=0.026 Sum_probs=55.4
Q ss_pred CCEEEEeccCCcEEEEECCCCccceEeecccccCCcceeeEE--ee-----ee-eEEEEEecCCCceeeeeecCCCCCcc
Q 039692 48 NGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTGLSGTGIVV--NV-----TV-AVVVAVSRSNGELVWSTQIDPRPRSQ 119 (417)
Q Consensus 48 ~g~v~v~~~~g~l~ald~~tG~~~W~~~~~~~~~~~p~~~v~--~~-----~v-~~l~ald~~tG~~~W~~~~~~~~~~~ 119 (417)
++.|++++..+-|+.+|.++++..+-.............+.. ++ .. +.|+.+|.++++....... ......
T Consensus 373 ~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~-~~~~~~ 451 (781)
T 3v9f_A 373 QGKLWIGTDGGGINVFENGKRVAIYNKENRELLSNSVLCSLKDSEGNLWFGTYLGNISYYNTRLKKFQIIELE-KNELLD 451 (781)
T ss_dssp TSCEEEEEBSSCEEEEETTEEEEECC-----CCCSBEEEEEECTTSCEEEEETTEEEEEECSSSCEEEECCST-TTCCCC
T ss_pred CCCEEEEeCCCcEEEEECCCCeEEEccCCCCCCCcceEEEEECCCCCEEEEeccCCEEEEcCCCCcEEEeccC-CCCCCe
Confidence 478999997778999998776543321111100000001111 12 11 7899999988875432211 000011
Q ss_pred eeeceeEE-cCeEEEEeCCccCccccCcccCCCceEEEEeCCCCceec
Q 039692 120 ITMSGSVY-MGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIW 166 (417)
Q Consensus 120 ~~~sp~v~-~~~v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~~~W 166 (417)
+. +.... ++.+++++. +.|+.+|+++++...
T Consensus 452 v~-~i~~d~~g~lwigt~---------------~Gl~~~~~~~~~~~~ 483 (781)
T 3v9f_A 452 VR-VFYEDKNKKIWIGTH---------------AGVFVIDLASKKVIH 483 (781)
T ss_dssp EE-EEEECTTSEEEEEET---------------TEEEEEESSSSSCCE
T ss_pred EE-EEEECCCCCEEEEEC---------------CceEEEeCCCCeEEe
Confidence 11 11122 578999885 469999998876543
No 121
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=96.55 E-value=0.35 Score=44.43 Aligned_cols=138 Identities=10% Similarity=0.029 Sum_probs=79.1
Q ss_pred CceEEEEeCCCCceeceeeecCCCCCCCCCCCCccccCCCceeecccCcccCCCCCCCCCCCCcccCCCCCCeEEEEECC
Q 039692 151 RGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYSGAAVWGSSPAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDID 230 (417)
Q Consensus 151 ~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~~gg~~~~~~pa~d~~~~~~~~~~~~~p~~~~~~v~~~~~~~~l~ald~~ 230 (417)
++.|..+|.++++.+-.+..... .+. ..++.++ ...+..+..++.+..+|.+
T Consensus 194 d~~i~i~d~~~~~~~~~~~~h~~-----------~v~--~~~~s~~---------------~~~l~s~s~Dg~i~iwd~~ 245 (340)
T 4aow_A 194 DKLVKVWNLANCKLKTNHIGHTG-----------YLN--TVTVSPD---------------GSLCASGGKDGQAMLWDLN 245 (340)
T ss_dssp TSCEEEEETTTTEEEEEECCCSS-----------CEE--EEEECTT---------------SSEEEEEETTCEEEEEETT
T ss_pred CCEEEEEECCCCceeeEecCCCC-----------cEE--EEEECCC---------------CCEEEEEeCCCeEEEEEec
Confidence 67899999999888765543110 010 1122221 1234455678899999999
Q ss_pred CCceEEEecCCCCcceeeeccCCCCCCCCCCCCCCCccCCCceEEEEecCCeeeeEEEEEcccceEEEEECCCCcEEEEe
Q 039692 231 SGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDIIWFK 310 (417)
Q Consensus 231 tG~~~W~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~p~v~~~~~~G~~~~~v~~~~~~G~l~ald~~tG~~lW~~ 310 (417)
+++.+..+...... ....... ++.+++++.++.+...|.+++..++..
T Consensus 246 ~~~~~~~~~~~~~v----------------------------~~~~~~~----~~~~~~~~~d~~i~iwd~~~~~~~~~~ 293 (340)
T 4aow_A 246 EGKHLYTLDGGDII----------------------------NALCFSP----NRYWLCAATGPSIKIWDLEGKIIVDEL 293 (340)
T ss_dssp TTEEEEEEECSSCE----------------------------EEEEECS----SSSEEEEEETTEEEEEETTTTEEEEEE
T ss_pred cCceeeeecCCceE----------------------------EeeecCC----CCceeeccCCCEEEEEECCCCeEEEec
Confidence 99988776643211 0011111 234556777899999999999888877
Q ss_pred ecCCCCC----CCcceecc--cccCCeEEEEeccCCceeeeecC
Q 039692 311 LAGPGGR----EGGGVWGA--ATDGRRVYTNIVNNDRIIWSTAD 348 (417)
Q Consensus 311 ~~~~~~~----~g~~~~~~--~~~~~~vy~~~~~~~~~~W~~~~ 348 (417)
+...... .......+ ..++..|+....++.=.+|+.+.
T Consensus 294 ~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~Dg~v~iW~~~t 337 (340)
T 4aow_A 294 KQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVTI 337 (340)
T ss_dssp CCC-------CCCCCEEEEEECTTSSEEEEEETTSCEEEEEEEC
T ss_pred cccceeeeccCCCCCEEEEEECCCCCEEEEEeCCCEEEEEeCCC
Confidence 6431100 00111122 23455666666666677888764
No 122
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=96.51 E-value=0.6 Score=44.40 Aligned_cols=110 Identities=15% Similarity=0.166 Sum_probs=65.4
Q ss_pred cccCCCCCCeEEEEECCCCceEEEecCCCCcceeeeccCCCCCCCCCCCCCCCccCCCceE--EEEecCCeeeeEEEEEc
Q 039692 214 CISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPML--LTISTNGRFRDVVVAVQ 291 (417)
Q Consensus 214 ~v~~~~~~~~l~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~p~v--~~~~~~G~~~~~v~~~~ 291 (417)
.+..++.++.+..+|.++|+.+-.+........ ...+.+ .....+ ++.++.++
T Consensus 263 ~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~----------------------~~~~~v~~~~~s~~---g~~l~~g~ 317 (380)
T 3iz6_a 263 RFGTGSDDGTCRLFDMRTGHQLQVYNREPDRND----------------------NELPIVTSVAFSIS---GRLLFAGY 317 (380)
T ss_dssp EEEEECSSSCEEEEETTTTEEEEEECCCCSSSC----------------------CSSCSCSEEEECSS---SSEEEEEC
T ss_pred eEEEEcCCCeEEEEECCCCcEEEEecccccccc----------------------cccCceEEEEECCC---CCEEEEEE
Confidence 345667889999999999998876654322100 001111 222334 45788899
Q ss_pred ccceEEEEECCCCcEEEEeecCCCCCCCcce-ecccccCCeEEEEeccCCceeeeecC
Q 039692 292 KSGFAWAFDRDSGDIIWFKLAGPGGREGGGV-WGAATDGRRVYTNIVNNDRIIWSTAD 348 (417)
Q Consensus 292 ~~G~l~ald~~tG~~lW~~~~~~~~~~g~~~-~~~~~~~~~vy~~~~~~~~~~W~~~~ 348 (417)
.+|.++..|..+++.+.....-.....+... .....++..+.....+..-.+|....
T Consensus 318 ~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D~~i~iW~~~~ 375 (380)
T 3iz6_a 318 SNGDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSALCTGSWDKNLKIWAFSG 375 (380)
T ss_dssp TTSCEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSSEEEEECTTSCEEEEECCS
T ss_pred CCCCEEEEECCCCceEEEEecccCCCCCceEEEEECCCCCEEEEeeCCCCEEEEecCC
Confidence 9999999999999988766421111111111 11233556666566666677898753
No 123
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=96.50 E-value=0.24 Score=45.19 Aligned_cols=55 Identities=18% Similarity=0.244 Sum_probs=34.2
Q ss_pred EEEEEcccceEEEEECCCCcEEEEeecCCCCCCCcceecc-cccCCeEEEEeccCCceeeeecCC
Q 039692 286 VVVAVQKSGFAWAFDRDSGDIIWFKLAGPGGREGGGVWGA-ATDGRRVYTNIVNNDRIIWSTADP 349 (417)
Q Consensus 286 ~v~~~~~~G~l~ald~~tG~~lW~~~~~~~~~~g~~~~~~-~~~~~~vy~~~~~~~~~~W~~~~~ 349 (417)
.||+++ ++.|+.+|++ |+.+-....+.. ...... .-+++.+|+...+ -+|+.+..
T Consensus 230 ~l~v~~-~~~v~~~~~~-g~~~~~~~~~~~----~~~~~f~~~d~~~L~v~t~~---~l~~~~~~ 285 (296)
T 3e5z_A 230 LIWASA-GDGVHVLTPD-GDELGRVLTPQT----TSNLCFGGPEGRTLYMTVST---EFWSIETN 285 (296)
T ss_dssp CEEEEE-TTEEEEECTT-SCEEEEEECSSC----CCEEEEESTTSCEEEEEETT---EEEEEECS
T ss_pred CEEEEc-CCeEEEECCC-CCEEEEEECCCC----ceeEEEECCCCCEEEEEcCC---eEEEEEcc
Confidence 477777 7889999986 888777765311 111111 2345678888653 47777653
No 124
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=96.47 E-value=0.087 Score=49.33 Aligned_cols=247 Identities=11% Similarity=0.062 Sum_probs=114.2
Q ss_pred CCEEEEeccCCcEEEEECC--CCccceEeeccc-ccC---Ccce--e--eEEeeeeeEEEEEecCCCc--eeeeeecCCC
Q 039692 48 NGVVYFPSWNGYLYAVNAF--NGALIWEQNLSK-LTG---LSGT--G--IVVNVTVAVVVAVSRSNGE--LVWSTQIDPR 115 (417)
Q Consensus 48 ~g~v~v~~~~g~l~ald~~--tG~~~W~~~~~~-~~~---~~p~--~--~v~~~~v~~l~ald~~tG~--~~W~~~~~~~ 115 (417)
+..++.++.++.|+.+|.. +++.+..+.... .+. .++. + ++.....+.+..+|..+++ .+........
T Consensus 23 ~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~ 102 (379)
T 3jrp_A 23 GKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSA 102 (379)
T ss_dssp SSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSS
T ss_pred CCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEEEEEEcCCCceeEeeeecCCCc
Confidence 3467777788999999887 444444443221 110 1110 0 1111122788888888886 4444332211
Q ss_pred CCcceeeceeEEcCeEEEEeCCccCccccCcccCCCceEEEEeCCCCceeceeeecCCCCCCCCCCCCccccCCCceeec
Q 039692 116 PRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYSGAAVWGSSPAIDV 195 (417)
Q Consensus 116 ~~~~~~~sp~v~~~~v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~~gg~~~~~~pa~d~ 195 (417)
....+..+|.-.+..++++.. ++.|..+|.++++..=......... .+. ..++.+
T Consensus 103 ~v~~~~~~~~~~~~~l~~~~~--------------d~~i~v~d~~~~~~~~~~~~~~~~~---------~v~--~~~~~~ 157 (379)
T 3jrp_A 103 SVNSVQWAPHEYGPLLLVASS--------------DGKVSVVEFKENGTTSPIIIDAHAI---------GVN--SASWAP 157 (379)
T ss_dssp CEEEEEECCGGGCSEEEEEET--------------TSEEEEEECCTTSCCCEEEEECCTT---------CEE--EEEECC
T ss_pred ceEEEEeCCCCCCCEEEEecC--------------CCcEEEEecCCCCceeeEEecCCCC---------ceE--EEEEcC
Confidence 111122222000234555554 6899999998775433322211110 000 112222
Q ss_pred ccCcccCCCCCCCCCCCCcccCCCCCCeEEEEECCCCceEEEecC--CCCcceeeeccCCCCCCCCCCCCCCCccCCCce
Q 039692 196 IRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPL--GGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPM 273 (417)
Q Consensus 196 ~~~~~~~~~~~~p~~~~~~v~~~~~~~~l~ald~~tG~~~W~~~~--~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~p~ 273 (417)
......... ........+..+..++.+..+|.++++..+.... ..+. .++
T Consensus 158 ~~~~~~~~~--~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~--------------------------~~v 209 (379)
T 3jrp_A 158 ATIEEDGEH--NGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHS--------------------------DWV 209 (379)
T ss_dssp CC------------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCS--------------------------SCE
T ss_pred ccccccccc--cCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEeccc--------------------------CcE
Confidence 100000000 0000122344455677788888777765544321 1111 111
Q ss_pred E-EEEecCCeeeeEEEEEcccceEEEEECCCCcEEEEeecCCCCCCCcceecc--cccCCeEEEEeccCCceeeeec
Q 039692 274 L-LTISTNGRFRDVVVAVQKSGFAWAFDRDSGDIIWFKLAGPGGREGGGVWGA--ATDGRRVYTNIVNNDRIIWSTA 347 (417)
Q Consensus 274 v-~~~~~~G~~~~~v~~~~~~G~l~ald~~tG~~lW~~~~~~~~~~g~~~~~~--~~~~~~vy~~~~~~~~~~W~~~ 347 (417)
. .....++..++.++.++.+|.+...|..+++..+....-...........+ ..++..+++...++.-.+|+..
T Consensus 210 ~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~ 286 (379)
T 3jrp_A 210 RDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKEN 286 (379)
T ss_dssp EEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEESSSSEEEEEEE
T ss_pred eEEEECCCCCCCCeEEEEeCCCEEEEEeCCCCCccceeeeeccccCCCcEEEEEEcCCCCEEEEecCCCcEEEEeCC
Confidence 1 112222100357888889999999999998655544432110011112222 2355566666666666777765
No 125
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=96.46 E-value=0.44 Score=45.93 Aligned_cols=96 Identities=15% Similarity=0.156 Sum_probs=57.4
Q ss_pred CCEEEEeccCCcEEEEECCCCccceEeecccccC------Cccee--eEEeeeeeEEEEEecCCCceeeeeecCCCCCcc
Q 039692 48 NGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG------LSGTG--IVVNVTVAVVVAVSRSNGELVWSTQIDPRPRSQ 119 (417)
Q Consensus 48 ~g~v~v~~~~g~l~ald~~tG~~~W~~~~~~~~~------~~p~~--~v~~~~v~~l~ald~~tG~~~W~~~~~~~~~~~ 119 (417)
++.|.++ .++.|+..|++||+.+-..++..... .+|.+ ++.....+.+...|.++|+.+.+.......
T Consensus 116 ~n~lAvg-ld~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~~~~h~~~--- 191 (420)
T 4gga_A 116 GNVLAVA-LDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSAR--- 191 (420)
T ss_dssp TSEEEEE-ETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSC---
T ss_pred CCEEEEE-eCCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEEEEeCCCCc---
Confidence 4556555 48899999999999887776643211 12211 111223388999999999998887632211
Q ss_pred eeeceeEEcCe-EEEEeCCccCccccCcccCCCceEEEEeCCCCc
Q 039692 120 ITMSGSVYMGA-FYVGLSSLEEALPADQCCTFRGSLAKLDVRNGR 163 (417)
Q Consensus 120 ~~~sp~v~~~~-v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~ 163 (417)
+. + +..++. +..+.. ++.+...|..+..
T Consensus 192 v~-~-~s~~~~~l~sgs~--------------d~~i~~~d~~~~~ 220 (420)
T 4gga_A 192 VG-S-LSWNSYILSSGSR--------------SGHIHHHDVRVAE 220 (420)
T ss_dssp EE-E-EEEETTEEEEEET--------------TSEEEEEETTSSS
T ss_pred eE-E-EeeCCCEEEEEeC--------------CCceeEeeecccc
Confidence 11 1 122444 444443 5788888876543
No 126
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=96.44 E-value=0.075 Score=49.10 Aligned_cols=144 Identities=13% Similarity=0.054 Sum_probs=81.1
Q ss_pred eEEEEEecCCCceeeeeecCCCCCcceeeceeEEcCe-EEEEeCCccCccccCcccCCCceEEEEeCCCCceeceeeecC
Q 039692 94 AVVVAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGA-FYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYMLP 172 (417)
Q Consensus 94 ~~l~ald~~tG~~~W~~~~~~~~~~~~~~sp~v~~~~-v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~~~W~~~~~~ 172 (417)
+.+..+|..+++.+-...........+..+| ++. ++.+.. ++.|..+|.++++.+..+....
T Consensus 195 ~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~---~~~~l~s~s~--------------Dg~i~iwd~~~~~~~~~~~~~~ 257 (340)
T 4aow_A 195 KLVKVWNLANCKLKTNHIGHTGYLNTVTVSP---DGSLCASGGK--------------DGQAMLWDLNEGKHLYTLDGGD 257 (340)
T ss_dssp SCEEEEETTTTEEEEEECCCSSCEEEEEECT---TSSEEEEEET--------------TCEEEEEETTTTEEEEEEECSS
T ss_pred CEEEEEECCCCceeeEecCCCCcEEEEEECC---CCCEEEEEeC--------------CCeEEEEEeccCceeeeecCCc
Confidence 7788899999988776653222111122233 444 444444 6899999999999887765421
Q ss_pred CCCCCCCCCCCccccCCCceeecccCcccCCCCCCCCCCCCcccCCCCCCeEEEEECCCCceEEEecCCCCcceeeeccC
Q 039692 173 DNGGKRGGYSGAAVWGSSPAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLV 252 (417)
Q Consensus 173 ~~~~~~~~~~gg~~~~~~pa~d~~~~~~~~~~~~~p~~~~~~v~~~~~~~~l~ald~~tG~~~W~~~~~~~~~~~~~~~~ 252 (417)
. + ....+.+ +..+..+..++.+..+|.++++.++..+.......
T Consensus 258 ~------------v--~~~~~~~----------------~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~------ 301 (340)
T 4aow_A 258 I------------I--NALCFSP----------------NRYWLCAATGPSIKIWDLEGKIIVDELKQEVISTS------ 301 (340)
T ss_dssp C------------E--EEEEECS----------------SSSEEEEEETTEEEEEETTTTEEEEEECCC-----------
T ss_pred e------------E--EeeecCC----------------CCceeeccCCCEEEEEECCCCeEEEeccccceeee------
Confidence 1 0 0111111 12233445678899999999998887765322100
Q ss_pred CCCCCCCCCCCCCCccCCCceE-EEEecCCeeeeEEEEEcccceEEEEECCCCcE
Q 039692 253 PNNPDCPPGPNLDADFGEAPML-LTISTNGRFRDVVVAVQKSGFAWAFDRDSGDI 306 (417)
Q Consensus 253 ~~~~~c~~~~~~~~~~~~~p~v-~~~~~~G~~~~~v~~~~~~G~l~ald~~tG~~ 306 (417)
......++. .....+| +.|+.++.||.++..|.+||++
T Consensus 302 -------------~~~h~~~v~~l~~s~dg---~~l~sgs~Dg~v~iW~~~tGtr 340 (340)
T 4aow_A 302 -------------SKAEPPQCTSLAWSADG---QTLFAGYTDNLVRVWQVTIGTR 340 (340)
T ss_dssp ---------------CCCCCEEEEEECTTS---SEEEEEETTSCEEEEEEEC---
T ss_pred -------------ccCCCCCEEEEEECCCC---CEEEEEeCCCEEEEEeCCCcCC
Confidence 000011221 1223444 5788888999999888888863
No 127
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=96.42 E-value=0.5 Score=42.53 Aligned_cols=97 Identities=13% Similarity=0.168 Sum_probs=54.5
Q ss_pred CCEEEEecc-CCcEEEEECCCCccceEeecccccCCcceeeEE--ee--ee-----eEEEEEecCCCceeeeeecCCCCC
Q 039692 48 NGVVYFPSW-NGYLYAVNAFNGALIWEQNLSKLTGLSGTGIVV--NV--TV-----AVVVAVSRSNGELVWSTQIDPRPR 117 (417)
Q Consensus 48 ~g~v~v~~~-~g~l~ald~~tG~~~W~~~~~~~~~~~p~~~v~--~~--~v-----~~l~ald~~tG~~~W~~~~~~~~~ 117 (417)
++.+|+++. ++.|+.+|++ |+.. ++..... ...|.++.. ++ .+ +.|+.+|.+ |+.. .+......
T Consensus 72 ~g~l~v~~~~~~~v~~~d~~-g~~~-~~~~~~~-~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~-~~~~~~~~- 145 (300)
T 2qc5_A 72 LGDIWFTENGANKIGKLSKK-GGFT-EYPLPQP-DSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIY-EYDLPNKG- 145 (300)
T ss_dssp TSCEEEEETTTTEEEEECTT-SCEE-EEECSST-TCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEE-EEECSSTT-
T ss_pred CCCEEEEecCCCeEEEECCC-CCeE-EecCCCC-CCCCccceECCCCCEEEEccCCCeEEEECCC-CCEE-EccCCCCC-
Confidence 578888875 5789999987 7753 2333211 122333322 22 12 678899977 7766 22222111
Q ss_pred cceeeceeE-EcCeEEEEeCCccCccccCcccCCCceEEEEeCCCCcee
Q 039692 118 SQITMSGSV-YMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRII 165 (417)
Q Consensus 118 ~~~~~sp~v-~~~~v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~~~ 165 (417)
. .....++ .++.+|++... .+.|+.+|. +|+..
T Consensus 146 ~-~~~~i~~d~~g~l~v~~~~-------------~~~i~~~~~-~g~~~ 179 (300)
T 2qc5_A 146 S-YPAFITLGSDNALWFTENQ-------------NNSIGRITN-TGKLE 179 (300)
T ss_dssp C-CEEEEEECTTSSEEEEETT-------------TTEEEEECT-TCCEE
T ss_pred C-CceeEEECCCCCEEEEecC-------------CCeEEEECC-CCcEE
Confidence 0 1111112 15678887753 478999998 67765
No 128
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=96.37 E-value=0.53 Score=42.31 Aligned_cols=97 Identities=13% Similarity=0.156 Sum_probs=55.8
Q ss_pred CCEEEEecc-CCcEEEEECCCCccceEeecccccCCcceeeEE--ee--ee-----eEEEEEecCCCceeeeeecCCCCC
Q 039692 48 NGVVYFPSW-NGYLYAVNAFNGALIWEQNLSKLTGLSGTGIVV--NV--TV-----AVVVAVSRSNGELVWSTQIDPRPR 117 (417)
Q Consensus 48 ~g~v~v~~~-~g~l~ald~~tG~~~W~~~~~~~~~~~p~~~v~--~~--~v-----~~l~ald~~tG~~~W~~~~~~~~~ 117 (417)
++.+|+++. ++.|..+|++ |+.. ++.+.... ..|.++.. ++ .+ +.|+.+|.+ |+.. ++.......
T Consensus 30 ~g~l~v~~~~~~~v~~~~~~-~~~~-~~~~~~~~-~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~~~-~~~~~~~~~ 104 (300)
T 2qc5_A 30 DGKVWFTQHKANKISSLDQS-GRIK-EFEVPTPD-AKVMCLIVSSLGDIWFTENGANKIGKLSKK-GGFT-EYPLPQPDS 104 (300)
T ss_dssp TSCEEEEETTTTEEEEECTT-SCEE-EEECSSTT-CCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEE-EEECSSTTC
T ss_pred CCCEEEEcCCCCeEEEECCC-CceE-EEECCCCC-CcceeEEECCCCCEEEEecCCCeEEEECCC-CCeE-EecCCCCCC
Confidence 678998874 6899999987 7654 23333211 22333322 12 11 678999977 7653 222221110
Q ss_pred cceeeceeEE-cCeEEEEeCCccCccccCcccCCCceEEEEeCCCCcee
Q 039692 118 SQITMSGSVY-MGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRII 165 (417)
Q Consensus 118 ~~~~~sp~v~-~~~v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~~~ 165 (417)
.....++. ++.+|++... ++.|+.+|++ |+..
T Consensus 105 --~~~~i~~~~~g~l~v~~~~-------------~~~i~~~~~~-g~~~ 137 (300)
T 2qc5_A 105 --GPYGITEGLNGDIWFTQLN-------------GDRIGKLTAD-GTIY 137 (300)
T ss_dssp --CEEEEEECSTTCEEEEETT-------------TTEEEEECTT-SCEE
T ss_pred --CCccceECCCCCEEEEccC-------------CCeEEEECCC-CCEE
Confidence 11111222 6788887753 4789999998 8766
No 129
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=96.35 E-value=0.37 Score=45.76 Aligned_cols=27 Identities=11% Similarity=-0.008 Sum_probs=21.3
Q ss_pred ccCCCCCCeEEEEECCCCceEEEecCC
Q 039692 215 ISSDIYANSIVALDIDSGRIAWAKPLG 241 (417)
Q Consensus 215 v~~~~~~~~l~ald~~tG~~~W~~~~~ 241 (417)
+..+..++.+..+|.++++.+..+...
T Consensus 181 l~~~~~dg~v~iwd~~~~~~~~~~~~~ 207 (416)
T 2pm9_A 181 FASAGSSNFASIWDLKAKKEVIHLSYT 207 (416)
T ss_dssp EEEESSSSCEEEEETTTTEEEEEECCC
T ss_pred EEEEcCCCCEEEEECCCCCcceEEecc
Confidence 445567889999999999988877654
No 130
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=96.35 E-value=0.39 Score=44.41 Aligned_cols=228 Identities=9% Similarity=-0.041 Sum_probs=121.1
Q ss_pred CCEEEEeccCCcEEEEECCCCccceEeecccccC---C--ccee--eEEeeeeeEEEEEecCCCceeeeeecCCCCCcce
Q 039692 48 NGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG---L--SGTG--IVVNVTVAVVVAVSRSNGELVWSTQIDPRPRSQI 120 (417)
Q Consensus 48 ~g~v~v~~~~g~l~ald~~tG~~~W~~~~~~~~~---~--~p~~--~v~~~~v~~l~ald~~tG~~~W~~~~~~~~~~~~ 120 (417)
+..++.++.++.|..+|.++++.+-.......+. . +|.+ ++..+..+.++.+|..+++.+.+.+....
T Consensus 98 ~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~----- 172 (368)
T 3mmy_A 98 GSKVFTASCDKTAKMWDLSSNQAIQIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPER----- 172 (368)
T ss_dssp SSEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEECSSC-----
T ss_pred CCEEEEEcCCCcEEEEEcCCCCceeeccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEecCCC-----
Confidence 3467778889999999999998776544333221 1 1111 11111238899999999999988885432
Q ss_pred eeceeEEcCeEEEEeCCccCccccCcccCCCceEEEEeCCCCceeceeeecCCCCCCCCCCCCccccCCCceeecccCcc
Q 039692 121 TMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYSGAAVWGSSPAIDVIRRQK 200 (417)
Q Consensus 121 ~~sp~v~~~~v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~~gg~~~~~~pa~d~~~~~~ 200 (417)
..........++++.. ++.+..+|.++....++....+.... .. ..++.....
T Consensus 173 ~~~~~~~~~~~~~~~~--------------~~~i~~~~~~~~~~~~~~~~~~~~~~-------~~----~~~~~~~~~-- 225 (368)
T 3mmy_A 173 CYCADVIYPMAVVATA--------------ERGLIVYQLENQPSEFRRIESPLKHQ-------HR----CVAIFKDKQ-- 225 (368)
T ss_dssp EEEEEEETTEEEEEEG--------------GGCEEEEECSSSCEEEEECCCSCSSC-------EE----EEEEEECTT--
T ss_pred ceEEEecCCeeEEEeC--------------CCcEEEEEeccccchhhhccccccCC-------Cc----eEEEcccCC--
Confidence 1122234566666665 58899999988777665443221110 00 001110000
Q ss_pred cCCCCCCCCCCCCcccCCCCCCeEEEEECCCC---ceEEEecCCCCcceeeeccCCCCCCCCCCCCCCCccCCCceE-EE
Q 039692 201 QNNQTTKPTHPDQCISSDIYANSIVALDIDSG---RIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPML-LT 276 (417)
Q Consensus 201 ~~~~~~~p~~~~~~v~~~~~~~~l~ald~~tG---~~~W~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~p~v-~~ 276 (417)
.. ...+..+..++.+..+|.+++ +.+..+.......... .......++. ..
T Consensus 226 -----~~----~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~v~~~~ 280 (368)
T 3mmy_A 226 -----NK----PTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNT----------------SAPQDIYAVNGIA 280 (368)
T ss_dssp -----SC----EEEEEEEETTSEEEEEESSCSCHHHHSEEEECSEEC--------------------CCCEEECCEEEEE
T ss_pred -----CC----CCeEEEecCCCcEEEEecCCCCccccceeeeeeecccccc----------------cccccccceEEEE
Confidence 00 011334456677777777766 3344333321100000 0000000111 12
Q ss_pred EecCCeeeeEEEEEcccceEEEEECCCCcEEEEeecCCCCCCCcceecc--cccCCeEEEEeccCC
Q 039692 277 ISTNGRFRDVVVAVQKSGFAWAFDRDSGDIIWFKLAGPGGREGGGVWGA--ATDGRRVYTNIVNND 340 (417)
Q Consensus 277 ~~~~G~~~~~v~~~~~~G~l~ald~~tG~~lW~~~~~~~~~~g~~~~~~--~~~~~~vy~~~~~~~ 340 (417)
...+| +.++.++.||.++..|..+++.+...... . .....+ ..++..+.....++.
T Consensus 281 ~sp~~---~~l~s~~~dg~i~iwd~~~~~~~~~~~~~----~-~~v~~~~~s~~g~~l~~~s~d~~ 338 (368)
T 3mmy_A 281 FHPVH---GTLATVGSDGRFSFWDKDARTKLKTSEQL----D-QPISACCFNHNGNIFAYASSYDW 338 (368)
T ss_dssp ECTTT---CCEEEEETTSCEEEEETTTTEEEEECCCC----S-SCEEEEEECTTSSCEEEEECCCS
T ss_pred EecCC---CEEEEEccCCeEEEEECCCCcEEEEecCC----C-CCceEEEECCCCCeEEEEecccc
Confidence 22333 57888889999999999999998776531 1 112222 235566666655544
No 131
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=96.35 E-value=0.49 Score=47.52 Aligned_cols=104 Identities=9% Similarity=-0.041 Sum_probs=65.9
Q ss_pred CEEEEeccCCcEEEEECCCCccceEeec-----ccccCCcceeeEEee-------eeeEEEEEecCCCceeeeeecCCCC
Q 039692 49 GVVYFPSWNGYLYAVNAFNGALIWEQNL-----SKLTGLSGTGIVVNV-------TVAVVVAVSRSNGELVWSTQIDPRP 116 (417)
Q Consensus 49 g~v~v~~~~g~l~ald~~tG~~~W~~~~-----~~~~~~~p~~~v~~~-------~v~~l~ald~~tG~~~W~~~~~~~~ 116 (417)
..++.++.++.|+.+|.++|+.+.++.. ...+. .+. ..++ ..+.+..+|..+++.+.++......
T Consensus 220 ~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~v~--~~~-~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~ 296 (615)
T 1pgu_A 220 EFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIF--ALS-WLDSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQ 296 (615)
T ss_dssp CEEEEEETTCCEEEEETTTCCEEEECCBTTBCCCSCEE--EEE-ESSSSEEEEEETTSEEEEEETTTTEEEEEEECCTTC
T ss_pred CEEEEEeCCCeEEEEECCCCCEeEEecccccccCCceE--EEE-EcCCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCc
Confidence 4677788899999999999998887722 11111 010 1122 1288999999999999888865221
Q ss_pred C-cceeeceeEEcCeEEEEeCCccCccccCcccCCCceEEEEeCCCCceeceee
Q 039692 117 R-SQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTY 169 (417)
Q Consensus 117 ~-~~~~~sp~v~~~~v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~~~W~~~ 169 (417)
. ..+...-...+..++++.. ++.|..+|..+++.+..+.
T Consensus 297 ~~~~~~~~~~~~~~~l~~~~~--------------~g~i~~~d~~~~~~~~~~~ 336 (615)
T 1pgu_A 297 LGNQQVGVVATGNGRIISLSL--------------DGTLNFYELGHDEVLKTIS 336 (615)
T ss_dssp GGGCEEEEEEEETTEEEEEET--------------TSCEEEEETTEEEEEEEEC
T ss_pred ccCceeEEEeCCCCeEEEEEC--------------CCCEEEEECCCCcEEEEEe
Confidence 1 1111111114556666665 5889999988887776554
No 132
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=96.29 E-value=0.29 Score=46.22 Aligned_cols=188 Identities=9% Similarity=-0.015 Sum_probs=96.1
Q ss_pred CEE-EEeccCCcEEEEECCCCccceEeecccccCCcceeeEEee-----eeeEEEEEecCCC-ceeeeeecCCCCCccee
Q 039692 49 GVV-YFPSWNGYLYAVNAFNGALIWEQNLSKLTGLSGTGIVVNV-----TVAVVVAVSRSNG-ELVWSTQIDPRPRSQIT 121 (417)
Q Consensus 49 g~v-~v~~~~g~l~ald~~tG~~~W~~~~~~~~~~~p~~~v~~~-----~v~~l~ald~~tG-~~~W~~~~~~~~~~~~~ 121 (417)
+.+ ++++.++.|...|.++|+.+-++.....+.+ . ..... ..+.++.+|..++ +.+.+... ......
T Consensus 71 ~~~~~~~~~d~~v~iWd~~~~~~~~~~~~~~~v~~--v-~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~---~~~~~~ 144 (355)
T 3vu4_A 71 NYVAFVTGVKEVVHIWDDVKKQDVSRIKVDAPVKD--L-FLSREFIVVSYGDVISVFKFGNPWKRITDDIR---FGGVCE 144 (355)
T ss_dssp SEEEEECSSTTEEEEEETTTTEEEEEEECSSCEEE--E-EECSSEEEEEETTEEEEEESSTTCCBSSCCEE---EEEEEE
T ss_pred CEEEEEECCccEEEEEECCCCcEEEEEECCCceEE--E-EEcCCEEEEEEcCEEEEEECCCCceeeEEecc---CCceEE
Confidence 444 4566678999999999999887775442211 0 01111 1277888888877 66655543 101111
Q ss_pred eceeEEcCeEEEEeCCccCccccCcccCCCceEEEEeCCCCceeceeeecCCC------CCCCCCCCCccccCCCceeec
Q 039692 122 MSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDN------GGKRGGYSGAAVWGSSPAIDV 195 (417)
Q Consensus 122 ~sp~v~~~~v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~~~W~~~~~~~~------~~~~~~~~gg~~~~~~pa~d~ 195 (417)
.+| ..+.+.+.. .+|.|..+|.++++..-..+..+.. ........ +.+. ..++.+
T Consensus 145 ~s~----~~la~~sg~------------~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~-~~v~--~~~~s~ 205 (355)
T 3vu4_A 145 FSN----GLLVYSNEF------------NLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHT-NPIK--MVRLNR 205 (355)
T ss_dssp EET----TEEEEEESS------------CTTCEEEEECCC------------------CCEEECCCS-SCEE--EEEECT
T ss_pred EEc----cEEEEeCCC------------cCcEEEEEECCCCCccccccccccccccCcccEEEEccC-CceE--EEEECC
Confidence 122 444443111 2688999999887632111100000 00000000 0010 112222
Q ss_pred ccCcccCCCCCCCCCCCCcccCCCCCCe-EEEEECCCCceEEEecCCCCcceeeeccCCCCCCCCCCCCCCCccCCCce-
Q 039692 196 IRRQKQNNQTTKPTHPDQCISSDIYANS-IVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPM- 273 (417)
Q Consensus 196 ~~~~~~~~~~~~p~~~~~~v~~~~~~~~-l~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~p~- 273 (417)
....+..++.++. +...|.++|+.+-.+..+.+. .++
T Consensus 206 ---------------~g~~l~s~s~d~~~v~iwd~~~~~~~~~~~~g~h~--------------------------~~v~ 244 (355)
T 3vu4_A 206 ---------------KSDMVATCSQDGTIIRVFKTEDGVLVREFRRGLDR--------------------------ADVV 244 (355)
T ss_dssp ---------------TSSEEEEEETTCSEEEEEETTTCCEEEEEECTTCC--------------------------SCEE
T ss_pred ---------------CCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCCC--------------------------CcEE
Confidence 1223445567787 999999999998877643111 111
Q ss_pred EEEEecCCeeeeEEEEEcccceEEEEECCCCc
Q 039692 274 LLTISTNGRFRDVVVAVQKSGFAWAFDRDSGD 305 (417)
Q Consensus 274 v~~~~~~G~~~~~v~~~~~~G~l~ald~~tG~ 305 (417)
-.....+| +.++.++.|+.+...|.+++.
T Consensus 245 ~~~~s~~~---~~l~s~s~d~~v~iw~~~~~~ 273 (355)
T 3vu4_A 245 DMKWSTDG---SKLAVVSDKWTLHVFEIFNDQ 273 (355)
T ss_dssp EEEECTTS---CEEEEEETTCEEEEEESSCCS
T ss_pred EEEECCCC---CEEEEEECCCEEEEEEccCCC
Confidence 11222333 577888899999999988764
No 133
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=96.27 E-value=0.22 Score=46.10 Aligned_cols=108 Identities=14% Similarity=0.118 Sum_probs=61.5
Q ss_pred CEEEEeccCCcEEEEECCCCc-cceEeecccc-cC---------Cccee--eEEeeeeeEEEEEecCCCc-eeeeeecCC
Q 039692 49 GVVYFPSWNGYLYAVNAFNGA-LIWEQNLSKL-TG---------LSGTG--IVVNVTVAVVVAVSRSNGE-LVWSTQIDP 114 (417)
Q Consensus 49 g~v~v~~~~g~l~ald~~tG~-~~W~~~~~~~-~~---------~~p~~--~v~~~~v~~l~ald~~tG~-~~W~~~~~~ 114 (417)
..++.++.++.|..+|.++++ .+..+..... +. .+|.+ ++.....+.+..+|..+++ .+.......
T Consensus 81 ~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~ 160 (357)
T 3i2n_A 81 RYLATGDFGGNLHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQ 160 (357)
T ss_dssp CCEEEEETTSCEEEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECCCT
T ss_pred ceEEEecCCCeEEEEeCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcceeccccC
Confidence 667888889999999999998 6666553321 11 01110 1111123788899988887 555554321
Q ss_pred CC-Ccceeec---eeE-EcCe-EEEEeCCccCccccCcccCCCceEEEEeCCCCceeceeee
Q 039692 115 RP-RSQITMS---GSV-YMGA-FYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYM 170 (417)
Q Consensus 115 ~~-~~~~~~s---p~v-~~~~-v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~~~W~~~~ 170 (417)
.. ...+.+- +.. -++. ++++.. ++.|..+|.++++.++....
T Consensus 161 ~~~~~~v~~~~~~~~~~~~~~~l~~~~~--------------d~~i~i~d~~~~~~~~~~~~ 208 (357)
T 3i2n_A 161 GENKRDCWTVAFGNAYNQEERVVCAGYD--------------NGDIKLFDLRNMALRWETNI 208 (357)
T ss_dssp TSCCCCEEEEEEECCCC-CCCEEEEEET--------------TSEEEEEETTTTEEEEEEEC
T ss_pred CCCCCceEEEEEEeccCCCCCEEEEEcc--------------CCeEEEEECccCceeeecCC
Confidence 11 1111111 001 1344 555544 58999999999998776443
No 134
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=96.24 E-value=0.23 Score=45.78 Aligned_cols=225 Identities=9% Similarity=0.001 Sum_probs=113.1
Q ss_pred EEEEeccCCcEEEEEC-CCCccceEeec--c-cccC---Ccce-eeEEeeeeeEEEEEecCC---------Cceeeeeec
Q 039692 50 VVYFPSWNGYLYAVNA-FNGALIWEQNL--S-KLTG---LSGT-GIVVNVTVAVVVAVSRSN---------GELVWSTQI 112 (417)
Q Consensus 50 ~v~v~~~~g~l~ald~-~tG~~~W~~~~--~-~~~~---~~p~-~~v~~~~v~~l~ald~~t---------G~~~W~~~~ 112 (417)
.++.++.++.|+.+|. ++++. -.+.. . ..+. .+|. -++..+..+.++.+|..+ ++.+.++..
T Consensus 71 ~l~~~~~dg~i~~wd~~~~~~~-~~~~~~~~~~~v~~l~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~ 149 (342)
T 1yfq_A 71 QIYVGTVQGEILKVDLIGSPSF-QALTNNEANLGICRICKYGDDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKV 149 (342)
T ss_dssp EEEEEETTSCEEEECSSSSSSE-EECBSCCCCSCEEEEEEETTTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSSS
T ss_pred EEEEEcCCCeEEEEEeccCCce-EeccccCCCCceEEEEeCCCCEEEEEcCCCeEEEEcccccccccccccCCeeeEEee
Confidence 5888888999999999 88865 12211 1 1110 0110 011111228888888877 776666552
Q ss_pred CCCCCcceeeceeEEcCeEEEEeCCccCccccCcccCCCceEEEEeCCC-CceeceeeecCCCCCCCCCCCCccccCCCc
Q 039692 113 DPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRN-GRIIWQTYMLPDNGGKRGGYSGAAVWGSSP 191 (417)
Q Consensus 113 ~~~~~~~~~~sp~v~~~~v~v~~~~~~~~~~~~~~~~~~g~l~ald~~t-G~~~W~~~~~~~~~~~~~~~~gg~~~~~~p 191 (417)
... + .+.....+.++++.. ++.|..+|.++ ++........+... .+ ...
T Consensus 150 ~~~----v-~~~~~~~~~l~~~~~--------------d~~i~i~d~~~~~~~~~~~~~~~~~~---------~i--~~i 199 (342)
T 1yfq_A 150 KNK----I-FTMDTNSSRLIVGMN--------------NSQVQWFRLPLCEDDNGTIEESGLKY---------QI--RDV 199 (342)
T ss_dssp CCC----E-EEEEECSSEEEEEES--------------TTEEEEEESSCCTTCCCEEEECSCSS---------CE--EEE
T ss_pred CCc----e-EEEEecCCcEEEEeC--------------CCeEEEEECCccccccceeeecCCCC---------ce--eEE
Confidence 211 1 122233445776665 58999999998 76654433322110 00 011
Q ss_pred eeec-ccCcccCCCCCCCCCCCCcccCCCCCCeEEEEECCCC------ceEEEecCCCCcceeeeccCCCCCCCCCCCCC
Q 039692 192 AIDV-IRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSG------RIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNL 264 (417)
Q Consensus 192 a~d~-~~~~~~~~~~~~p~~~~~~v~~~~~~~~l~ald~~tG------~~~W~~~~~~~~~~~~~~~~~~~~~c~~~~~~ 264 (417)
++.+ .. ..+..+..++.+...|.+++ +.+..+.......-
T Consensus 200 ~~~~~~~---------------~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~------------------ 246 (342)
T 1yfq_A 200 ALLPKEQ---------------EGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLK------------------ 246 (342)
T ss_dssp EECSGGG---------------CEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTT------------------
T ss_pred EECCCCC---------------CEEEEEecCCcEEEEEEcCCCcccccccceeeeccccccc------------------
Confidence 2222 11 12233344566666565554 44444433211000
Q ss_pred CCccCCCceE-EEEecCCeeeeEEEEEcccceEEEEECCCCcEEEEeecCCCCCCCcceecccccCCeEEEEeccCC-ce
Q 039692 265 DADFGEAPML-LTISTNGRFRDVVVAVQKSGFAWAFDRDSGDIIWFKLAGPGGREGGGVWGAATDGRRVYTNIVNND-RI 342 (417)
Q Consensus 265 ~~~~~~~p~v-~~~~~~G~~~~~v~~~~~~G~l~ald~~tG~~lW~~~~~~~~~~g~~~~~~~~~~~~vy~~~~~~~-~~ 342 (417)
. .....++. .....+ ++.|+.++.+|.++..|..+++.+....... . .....++.++..++....++. +.
T Consensus 247 ~-~~~~~~i~~~~~s~~---~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~h---~-~~v~~~~~~~~~l~s~s~Dg~~~~ 318 (342)
T 1yfq_A 247 D-TNLAYPVNSIEFSPR---HKFLYTAGSDGIISCWNLQTRKKIKNFAKFN---E-DSVVKIACSDNILCLATSDDTFKT 318 (342)
T ss_dssp C-CSSCCCEEEEEECTT---TCCEEEEETTSCEEEEETTTTEEEEECCCCS---S-SEEEEEEECSSEEEEEEECTHHHH
T ss_pred c-cccceeEEEEEEcCC---CCEEEEecCCceEEEEcCccHhHhhhhhccc---C-CCceEecCCCCeEEEEecCCcccc
Confidence 0 00001111 122233 3568888899999999999999987765310 1 222233344555555555544 44
Q ss_pred eeee
Q 039692 343 IWST 346 (417)
Q Consensus 343 ~W~~ 346 (417)
.++.
T Consensus 319 ~~~~ 322 (342)
T 1yfq_A 319 NAAI 322 (342)
T ss_dssp CSSS
T ss_pred cccc
Confidence 4453
No 135
>3elq_A Arylsulfate sulfotransferase; beta propeller, protein-substrate complex, periplasm, transesterification, phenol, bacteria; 2.00A {Escherichia coli} PDB: 3ett_A* 3ets_A*
Probab=96.23 E-value=0.093 Score=53.26 Aligned_cols=98 Identities=16% Similarity=0.184 Sum_probs=54.0
Q ss_pred CCcEEEEE-----CCCCccceEeecc---cccCCccee-eEEeeeeeEEEEEecCCCceeeeeecCCCCC---------c
Q 039692 57 NGYLYAVN-----AFNGALIWEQNLS---KLTGLSGTG-IVVNVTVAVVVAVSRSNGELVWSTQIDPRPR---------S 118 (417)
Q Consensus 57 ~g~l~ald-----~~tG~~~W~~~~~---~~~~~~p~~-~v~~~~v~~l~ald~~tG~~~W~~~~~~~~~---------~ 118 (417)
...||.++ ++..+..|...-. +.+.++|.+ ...-......+++| .+|+++|......... +
T Consensus 129 ~~~Ly~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~i~D-~~G~lrW~~~~~~~~~~~~~~~~~~g 207 (571)
T 3elq_A 129 EDRLYLVNTHTFTAQGSDLHWHGEKDKNAGILDAGPATGALPFDIAPFTFIVD-TEGEYRWWLDQDTFYDGRDRDINKRG 207 (571)
T ss_dssp TTCEEEEEEEECCSSCCCCCEECCCCTTSCTTCCCCEETTTTCCCEEEEEEEC-TTSCEEEECCGGGTCCSSSCCGGGCS
T ss_pred cCceEEEeccccCcccccccccccccccccccccCCCcccccccCCCceEEEc-CCCcEEEEeCcccccccceeeccCCC
Confidence 34566664 5556788984322 233334431 00001236788999 6899999988531100 0
Q ss_pred ceeeceeEEcCeEEEEeCCccCccccCcccCCCceEEEEeCCCCceeceeeec
Q 039692 119 QITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYML 171 (417)
Q Consensus 119 ~~~~sp~v~~~~v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~~~W~~~~~ 171 (417)
.+...--..++.+.++.. ..++.+|.. |+++|++...
T Consensus 208 ~l~~~~g~~nG~l~~g~G---------------~~i~elD~~-Gkvv~~~~lp 244 (571)
T 3elq_A 208 YLMGIRETPRGTFTAVQG---------------QHWYEFDMM-GQVLEDHKLP 244 (571)
T ss_dssp CCEEEEECTTSCEEEEEB---------------TEEEEECTT-CCEEEEEECC
T ss_pred eEEEEEecCCCCEEEecC---------------cEEEEECCC-CcEEEEEECC
Confidence 001000012455555542 369999985 9999998873
No 136
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=96.20 E-value=0.26 Score=46.95 Aligned_cols=57 Identities=14% Similarity=0.188 Sum_probs=41.0
Q ss_pred CCeEEEEECCCCceEEEecCCCCcceeeeccCCCCCCCCCCCCCCCccCCCceEEEEecCCeeeeEEEEEcccceEEEEE
Q 039692 221 ANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFD 300 (417)
Q Consensus 221 ~~~l~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~p~v~~~~~~G~~~~~v~~~~~~G~l~ald 300 (417)
...+..+|.+|++++=+.+.+. .+ -..+..+| +.+|+++. +.+..+|
T Consensus 285 ~~~v~viD~~t~~~v~~i~~~~--p~---------------------------~ia~spdg---~~l~v~n~-~~v~v~D 331 (361)
T 2oiz_A 285 AAEIWVMDTKTKQRVARIPGRD--AL---------------------------SMTIDQQR---NLMLTLDG-GNVNVYD 331 (361)
T ss_dssp CSEEEEEETTTTEEEEEEECTT--CC---------------------------EEEEETTT---TEEEEECS-SCEEEEE
T ss_pred CceEEEEECCCCcEEEEEecCC--ee---------------------------EEEECCCC---CEEEEeCC-CeEEEEE
Confidence 4589999999999987776543 11 11223454 47888887 8999999
Q ss_pred CCCC--cEEEEe
Q 039692 301 RDSG--DIIWFK 310 (417)
Q Consensus 301 ~~tG--~~lW~~ 310 (417)
+++| +++=+.
T Consensus 332 ~~t~~l~~~~~i 343 (361)
T 2oiz_A 332 ISQPEPKLLRTI 343 (361)
T ss_dssp CSSSSCEEEEEE
T ss_pred CCCCcceeeEEe
Confidence 9999 777553
No 137
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=96.20 E-value=0.46 Score=50.34 Aligned_cols=103 Identities=15% Similarity=0.124 Sum_probs=56.6
Q ss_pred CCEEEEeccCCcEEEEECCCCccceEeeccc--ccCCcce-eeEE--eee--e----eEEEEEecCCCceeeeeecCCC-
Q 039692 48 NGVVYFPSWNGYLYAVNAFNGALIWEQNLSK--LTGLSGT-GIVV--NVT--V----AVVVAVSRSNGELVWSTQIDPR- 115 (417)
Q Consensus 48 ~g~v~v~~~~g~l~ald~~tG~~~W~~~~~~--~~~~~p~-~~v~--~~~--v----~~l~ald~~tG~~~W~~~~~~~- 115 (417)
+|.|++++..+-|..+|.++++...-..... ......+ .+.. ++. + +.|+.+|.++++...-......
T Consensus 320 ~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~l~~~~V~~i~~d~~g~lWiGt~~~Gl~~~~~~~~~~~~~~~~~~~~ 399 (795)
T 4a2l_A 320 QGGMWLGTYFGGLNYYHPIRNRFKNIRNIPYKNSLSDNVVSCIVEDKDKNLWIGTNDGGLNLYNPITQRFTSYTLQEDES 399 (795)
T ss_dssp TSCEEEEESSSCEEEECGGGGSSEEECCCTTSSSCSCSSEEEEEECTTSCEEEEESSSCEEEECTTTCCEEEECCC----
T ss_pred CcCEEEEECCCCeEEeCCCcccceEEcCCCCCCCCCCCeeEEEEECCCCCEEEEECCCCeEEEcCCCCcEEEEecCCCCc
Confidence 5789999988889999987766443222111 1110011 1111 121 1 5799999888876543321100
Q ss_pred ---CCcceeeceeEE-cCe-EEEEeCCccCccccCcccCCCceEEEEeCCCCce
Q 039692 116 ---PRSQITMSGSVY-MGA-FYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRI 164 (417)
Q Consensus 116 ---~~~~~~~sp~v~-~~~-v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~~ 164 (417)
.......+-... ++. +++|+.+ +.|+.+|+++|+.
T Consensus 400 ~~~l~~~~v~~i~~d~~g~~lWigt~~--------------~Gl~~~d~~~~~~ 439 (795)
T 4a2l_A 400 ARGIGSNNIKAVYVDEKKSLVYIGTHA--------------GGLSILHRNSGQV 439 (795)
T ss_dssp --CCSCSCEEEEEEETTTTEEEEEETT--------------TEEEEEETTTCCE
T ss_pred ccCCCCccEEEEEEcCCCCEEEEEeCc--------------CceeEEeCCCCcE
Confidence 001111122222 567 9999863 6799999998764
No 138
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=96.08 E-value=0.62 Score=44.27 Aligned_cols=191 Identities=10% Similarity=-0.015 Sum_probs=101.4
Q ss_pred CEEEEeccCCcEEEEECCCCccceEeeccccc-CCcce-e----------eEEeeeeeEEEEEecC-CCceeeeeecCCC
Q 039692 49 GVVYFPSWNGYLYAVNAFNGALIWEQNLSKLT-GLSGT-G----------IVVNVTVAVVVAVSRS-NGELVWSTQIDPR 115 (417)
Q Consensus 49 g~v~v~~~~g~l~ald~~tG~~~W~~~~~~~~-~~~p~-~----------~v~~~~v~~l~ald~~-tG~~~W~~~~~~~ 115 (417)
..++.++.++.+..+|.++|+.+-.+...... ....+ . ++..+..+.+...|.. +++.+-.+.....
T Consensus 171 ~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~ 250 (380)
T 3iz6_a 171 TRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYHGHEG 250 (380)
T ss_dssp SCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEECCCSS
T ss_pred CEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEECCcCC
Confidence 35788889999999999999987655322110 00011 0 1111123677777765 3344333332111
Q ss_pred CCcceeeceeEEcCe-EEEEeCCccCccccCcccCCCceEEEEeCCCCceeceeeecCCCCCCCCCCCCccccCCCceee
Q 039692 116 PRSQITMSGSVYMGA-FYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYSGAAVWGSSPAID 194 (417)
Q Consensus 116 ~~~~~~~sp~v~~~~-v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~~gg~~~~~~pa~d 194 (417)
....+..+| ++. ++.++. ++.|..+|.++|+.+-.+...+..... ...+....++.
T Consensus 251 ~v~~v~~~p---~~~~l~s~s~--------------D~~i~lwd~~~~~~~~~~~~~~~~~~~------~~~~v~~~~~s 307 (380)
T 3iz6_a 251 DINSVKFFP---DGQRFGTGSD--------------DGTCRLFDMRTGHQLQVYNREPDRNDN------ELPIVTSVAFS 307 (380)
T ss_dssp CCCEEEECT---TSSEEEEECS--------------SSCEEEEETTTTEEEEEECCCCSSSCC------SSCSCSEEEEC
T ss_pred CeEEEEEec---CCCeEEEEcC--------------CCeEEEEECCCCcEEEEeccccccccc------ccCceEEEEEC
Confidence 111233334 444 444443 799999999999988666543211000 00000111222
Q ss_pred cccCcccCCCCCCCCCCCCcccCCCCCCeEEEEECCCCceEEEecCC--CCcceeeeccCCCCCCCCCCCCCCCccCCCc
Q 039692 195 VIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLG--GYDIFYFTCLVPNNPDCPPGPNLDADFGEAP 272 (417)
Q Consensus 195 ~~~~~~~~~~~~~p~~~~~~v~~~~~~~~l~ald~~tG~~~W~~~~~--~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~p 272 (417)
+. ...+..+..++.++.+|..+++.+-..... .+.. ..
T Consensus 308 ~~---------------g~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~h~~-------------------------~v 347 (380)
T 3iz6_a 308 IS---------------GRLLFAGYSNGDCYVWDTLLAEMVLNLGTLQNSHEG-------------------------RI 347 (380)
T ss_dssp SS---------------SSEEEEECTTSCEEEEETTTCCEEEEECCSCSSCCC-------------------------CC
T ss_pred CC---------------CCEEEEEECCCCEEEEECCCCceEEEEecccCCCCC-------------------------ce
Confidence 21 223455667889999999999887765331 1110 00
Q ss_pred eEEEEecCCeeeeEEEEEcccceEEEEECCCCc
Q 039692 273 MLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGD 305 (417)
Q Consensus 273 ~v~~~~~~G~~~~~v~~~~~~G~l~ald~~tG~ 305 (417)
.-.....+| ..|+.++.||.+...+...++
T Consensus 348 ~~l~~s~dg---~~l~sgs~D~~i~iW~~~~~~ 377 (380)
T 3iz6_a 348 SCLGLSSDG---SALCTGSWDKNLKIWAFSGHR 377 (380)
T ss_dssp CEEEECSSS---SEEEEECTTSCEEEEECCSSS
T ss_pred EEEEECCCC---CEEEEeeCCCCEEEEecCCCc
Confidence 111222333 577888889988877776554
No 139
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=96.00 E-value=0.45 Score=43.38 Aligned_cols=56 Identities=11% Similarity=0.112 Sum_probs=33.7
Q ss_pred EEEEEc-ccceEEEEECCCCcEEEEeecCCCCCCCcceeccc--ccCCeEEEEeccCCceeeeec
Q 039692 286 VVVAVQ-KSGFAWAFDRDSGDIIWFKLAGPGGREGGGVWGAA--TDGRRVYTNIVNNDRIIWSTA 347 (417)
Q Consensus 286 ~v~~~~-~~G~l~ald~~tG~~lW~~~~~~~~~~g~~~~~~~--~~~~~vy~~~~~~~~~~W~~~ 347 (417)
.+|+++ .++.|+.+|+++|+.+-....+. .....++ .+++.+|+.+...+ .++..+
T Consensus 238 ~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~-----~~~~~i~~~~dg~~l~v~~~~~~-~l~~~~ 296 (314)
T 1pjx_A 238 NLLVANWGSSHIEVFGPDGGQPKMRIRCPF-----EKPSNLHFKPQTKTIFVTEHENN-AVWKFE 296 (314)
T ss_dssp CEEEEEETTTEEEEECTTCBSCSEEEECSS-----SCEEEEEECTTSSEEEEEETTTT-EEEEEE
T ss_pred CEEEEEcCCCEEEEEcCCCCcEeEEEeCCC-----CCceeEEECCCCCEEEEEeCCCC-eEEEEe
Confidence 466664 56789999999898776665421 1122333 34455888876543 344444
No 140
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=95.94 E-value=0.26 Score=44.41 Aligned_cols=97 Identities=13% Similarity=0.161 Sum_probs=54.0
Q ss_pred CCEEEEec-cCCcEEEEECCCCccceEeecccccCCcceeeEE--ee--ee-----eEEEEEecCCCceeeeeecCCCCC
Q 039692 48 NGVVYFPS-WNGYLYAVNAFNGALIWEQNLSKLTGLSGTGIVV--NV--TV-----AVVVAVSRSNGELVWSTQIDPRPR 117 (417)
Q Consensus 48 ~g~v~v~~-~~g~l~ald~~tG~~~W~~~~~~~~~~~p~~~v~--~~--~v-----~~l~ald~~tG~~~W~~~~~~~~~ 117 (417)
++.+|+++ ..+.|+.+|+ +|+..- +..... ...|.++.. ++ .+ +.|+.+|. +|+.... ......
T Consensus 109 ~g~l~v~~~~~~~i~~~d~-~g~~~~-~~~~~~-~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~-~~~~~~- 182 (299)
T 2z2n_A 109 NGDIWFTEMNGNRIGRITD-DGKIRE-YELPNK-GSYPSFITLGSDNALWFTENQNNAIGRITE-SGDITEF-KIPTPA- 182 (299)
T ss_dssp TSCEEEEETTTTEEEEECT-TCCEEE-EECSST-TCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEE-ECSSTT-
T ss_pred CCCEEEEecCCceEEEECC-CCCEEE-ecCCCC-CCCCceEEEcCCCCEEEEeCCCCEEEEEcC-CCcEEEe-eCCCCC-
Confidence 57888876 4678999998 776542 222211 112322222 12 11 67888998 7876532 222111
Q ss_pred cceeeceeEE-cCeEEEEeCCccCccccCcccCCCceEEEEeCCCCcee
Q 039692 118 SQITMSGSVY-MGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRII 165 (417)
Q Consensus 118 ~~~~~sp~v~-~~~v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~~~ 165 (417)
. ......+. ++.+|++... .+.|+.+|+ +|+..
T Consensus 183 ~-~~~~i~~~~~g~l~v~~~~-------------~~~i~~~~~-~g~~~ 216 (299)
T 2z2n_A 183 S-GPVGITKGNDDALWFVEII-------------GNKIGRITT-SGEIT 216 (299)
T ss_dssp C-CEEEEEECTTSSEEEEETT-------------TTEEEEECT-TCCEE
T ss_pred C-cceeEEECCCCCEEEEccC-------------CceEEEECC-CCcEE
Confidence 1 11111222 5678988753 478999999 78754
No 141
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=95.88 E-value=0.75 Score=48.65 Aligned_cols=199 Identities=11% Similarity=0.044 Sum_probs=98.2
Q ss_pred ECCEEEEeccCCcEEEEECCCCccceEeecccccCCcceeeE-E-eee--e----eEEEEEecCCCceeeeeecC--CCC
Q 039692 47 ANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTGLSGTGIV-V-NVT--V----AVVVAVSRSNGELVWSTQID--PRP 116 (417)
Q Consensus 47 ~~g~v~v~~~~g~l~ald~~tG~~~W~~~~~~~~~~~p~~~v-~-~~~--v----~~l~ald~~tG~~~W~~~~~--~~~ 116 (417)
.++.+++++..+.|+.+|.++++..--..... ......+. + ++. + +.|+.+|.++++...-.... ...
T Consensus 182 ~~g~lwigt~~~Gl~~~~~~~~~~~~~~~~~~--~~~i~~i~~d~~g~lwigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~ 259 (795)
T 4a2l_A 182 QGDQIYIGTSTDGLYTYSITQKTFEKVIPILG--TKQIQAILQQSPTRIWVATEGAGLFLINPKTKEIKNYLHSPSNPKS 259 (795)
T ss_dssp ETTEEEEEESSSCEEEEETTTCCEEECC------CCCEEEEEEEETTEEEEEEBSSCEEEEETTTTEEEEECCCTTCTTS
T ss_pred CCCCEEEEECCCCEEEEeCCCCeEEEecCCCC--CCeeEEEEEcCCCCEEEEECCCCeEEEeCCCCeEEEeecCCCCccc
Confidence 37899999876679999998876532111110 00011111 1 121 1 46899998877653221111 000
Q ss_pred -CcceeeceeEE-cCeEEEEeCCccCccccCcccCCCceEEEEeCCCCceeceeeecCCCCCCCCCCCCccccCCCceee
Q 039692 117 -RSQITMSGSVY-MGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYSGAAVWGSSPAID 194 (417)
Q Consensus 117 -~~~~~~sp~v~-~~~v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~~gg~~~~~~pa~d 194 (417)
......+-... ++.+++++. +.|+.+|+++++...-......... .....+. +...|
T Consensus 260 l~~~~i~~i~~d~~g~lWigt~---------------~Gl~~~~~~~~~~~~~~~~~~~~~~----l~~~~i~--~i~~D 318 (795)
T 4a2l_A 260 ISSNYIRSLAMDSQNRLWIGTF---------------NDLNIYHEGTDSFASYSSNPVENGS----LSQRSVR--SIFMD 318 (795)
T ss_dssp CSCSBEEEEEECTTSCEEEEES---------------SCEEEEETTTTEEEEECCCTTSTTS----CSSSCEE--EEEEC
T ss_pred cCCCeEEEEEEcCCCCEEEEeC---------------ChhheEcCCCCeEEEEecCCCCCCC----CCCCcEE--EEEEe
Confidence 00111111122 678999885 3699999987765432211100000 0000010 01111
Q ss_pred cccCcccCCCCCCCCCCCCcccCCCCCCeEEEEECCCCceEEEecCCCCcceeeeccCCCCCCCCCCCCCCCccCCCceE
Q 039692 195 VIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPML 274 (417)
Q Consensus 195 ~~~~~~~~~~~~~p~~~~~~v~~~~~~~~l~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~p~v 274 (417)
. ++.+..++..+.|..+|+.+++........... .+ +...+
T Consensus 319 ~----------------~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~----------------------~l-~~~~V 359 (795)
T 4a2l_A 319 S----------------QGGMWLGTYFGGLNYYHPIRNRFKNIRNIPYKN----------------------SL-SDNVV 359 (795)
T ss_dssp T----------------TSCEEEEESSSCEEEECGGGGSSEEECCCTTSS----------------------SC-SCSSE
T ss_pred C----------------CcCEEEEECCCCeEEeCCCcccceEEcCCCCCC----------------------CC-CCCee
Confidence 1 123344555677888888777655432221110 01 12223
Q ss_pred EEEecCCeeeeEEEEEcccceEEEEECCCCcEEEE
Q 039692 275 LTISTNGRFRDVVVAVQKSGFAWAFDRDSGDIIWF 309 (417)
Q Consensus 275 ~~~~~~G~~~~~v~~~~~~G~l~ald~~tG~~lW~ 309 (417)
..+..+. ++.|++++.++.|+.+|.++++...-
T Consensus 360 ~~i~~d~--~g~lWiGt~~~Gl~~~~~~~~~~~~~ 392 (795)
T 4a2l_A 360 SCIVEDK--DKNLWIGTNDGGLNLYNPITQRFTSY 392 (795)
T ss_dssp EEEEECT--TSCEEEEESSSCEEEECTTTCCEEEE
T ss_pred EEEEECC--CCCEEEEECCCCeEEEcCCCCcEEEE
Confidence 3333332 34688899888899999998876543
No 142
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=95.86 E-value=0.22 Score=46.06 Aligned_cols=107 Identities=10% Similarity=0.028 Sum_probs=64.4
Q ss_pred CCEEEEeccCCcEEEEECCCCc-cceEeecccccCCcce-eeE------Eee-------eeeEEEEEecCCCceeeeeec
Q 039692 48 NGVVYFPSWNGYLYAVNAFNGA-LIWEQNLSKLTGLSGT-GIV------VNV-------TVAVVVAVSRSNGELVWSTQI 112 (417)
Q Consensus 48 ~g~v~v~~~~g~l~ald~~tG~-~~W~~~~~~~~~~~p~-~~v------~~~-------~v~~l~ald~~tG~~~W~~~~ 112 (417)
+..++.++.++.|..+|.++++ .+-.+.........++ .+. .++ ..+.++.+|..+++.++....
T Consensus 129 ~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~ 208 (357)
T 3i2n_A 129 APEIVTGSRDGTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALRWETNI 208 (357)
T ss_dssp CCEEEEEETTSCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEEEEEEEC
T ss_pred ccEEEEEeCCCeEEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCceeeecCC
Confidence 3477778889999999999987 5555544221100011 001 111 128999999999999877664
Q ss_pred CCCCCcceeeceeE-EcCeEEEEeCCccCccccCcccCCCceEEEEeCCCCceeceee
Q 039692 113 DPRPRSQITMSGSV-YMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTY 169 (417)
Q Consensus 113 ~~~~~~~~~~sp~v-~~~~v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~~~W~~~ 169 (417)
.... ..+..+|.- .+..++++.. ++.|..+|.++++.+..+.
T Consensus 209 ~~~v-~~~~~~~~~~~~~~l~~~~~--------------dg~i~i~d~~~~~~~~~~~ 251 (357)
T 3i2n_A 209 KNGV-CSLEFDRKDISMNKLVATSL--------------EGKFHVFDMRTQHPTKGFA 251 (357)
T ss_dssp SSCE-EEEEESCSSSSCCEEEEEES--------------TTEEEEEEEEEEETTTEEE
T ss_pred CCce-EEEEcCCCCCCCCEEEEECC--------------CCeEEEEeCcCCCccccee
Confidence 3221 112222210 2455666654 5899999998888776655
No 143
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=95.85 E-value=1.1 Score=41.42 Aligned_cols=100 Identities=11% Similarity=0.127 Sum_probs=48.0
Q ss_pred EEEEeccCC------cEEEEECCCCccceEeeccc---c--cCCccee-eEEeee---eeEEEEEecCCCceeeeee--c
Q 039692 50 VVYFPSWNG------YLYAVNAFNGALIWEQNLSK---L--TGLSGTG-IVVNVT---VAVVVAVSRSNGELVWSTQ--I 112 (417)
Q Consensus 50 ~v~v~~~~g------~l~ald~~tG~~~W~~~~~~---~--~~~~p~~-~v~~~~---v~~l~ald~~tG~~~W~~~--~ 112 (417)
++|+++..+ .++.+|.++|++........ + +..+|-+ ++.-.. .+.|+.+|.++|+..-... .
T Consensus 4 ~~~vg~y~~~~~~~i~v~~~d~~tg~~~~~~~~~~~~~p~~~a~spdg~l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~ 83 (347)
T 3hfq_A 4 RILFGTYTKKTSQGIYQGTLDTTAKTLTNDGLLAATQNPTYLALSAKDCLYSVDKEDDEGGIAAWQIDGQTAHKLNTVVA 83 (347)
T ss_dssp EEEEEECCSSSCCEEEEEEEETTTTEEEEEEEEEECSCCCCEEECTTCEEEEEEEETTEEEEEEEEEETTEEEEEEEEEE
T ss_pred EEEEEeccCCCCCCEEEEEEcCCCCeEEEeeeeeccCCcceEEEccCCeEEEEEecCCCceEEEEEecCCcEEEeeeeec
Confidence 577775321 37888888898754322221 1 1112222 111111 3678888887776422222 1
Q ss_pred CCCCCcceeeceeEEcC-eEEEEeCCccCccccCcccCCCceEEEEeCC-CCcee
Q 039692 113 DPRPRSQITMSGSVYMG-AFYVGLSSLEEALPADQCCTFRGSLAKLDVR-NGRII 165 (417)
Q Consensus 113 ~~~~~~~~~~sp~v~~~-~v~v~~~~~~~~~~~~~~~~~~g~l~ald~~-tG~~~ 165 (417)
.......+..+| ++ .+|+.... ++.+..+|.. +|+..
T Consensus 84 ~~~~p~~~a~sp---dg~~l~~~~~~-------------~~~v~v~~~~~~g~~~ 122 (347)
T 3hfq_A 84 PGTPPAYVAVDE---ARQLVYSANYH-------------KGTAEVMKIAADGALT 122 (347)
T ss_dssp ESCCCSEEEEET---TTTEEEEEETT-------------TTEEEEEEECTTSCEE
T ss_pred CCCCCEEEEECC---CCCEEEEEeCC-------------CCEEEEEEeCCCCCee
Confidence 111111122233 44 47776643 4677777773 55544
No 144
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=95.85 E-value=1.3 Score=42.09 Aligned_cols=140 Identities=10% Similarity=0.054 Sum_probs=77.7
Q ss_pred CceEEEEeCCCCceeceeeecCCCCCCCCCCCCccccCCCceeecccCcccCCCCCCCCCCCCcccCCCCCCeEEEEECC
Q 039692 151 RGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYSGAAVWGSSPAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDID 230 (417)
Q Consensus 151 ~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~~gg~~~~~~pa~d~~~~~~~~~~~~~p~~~~~~v~~~~~~~~l~ald~~ 230 (417)
++.|..+|.++|+.+.++...... ..+. ..++.++ ...+..+..++.+..+|.+
T Consensus 153 dg~i~iwd~~~~~~~~~~~~~~~~---------~~v~--~~~~~~~---------------~~~l~~~~~d~~i~iwd~~ 206 (402)
T 2aq5_A 153 DNVILVWDVGTGAAVLTLGPDVHP---------DTIY--SVDWSRD---------------GALICTSCRDKRVRVIEPR 206 (402)
T ss_dssp TSCEEEEETTTTEEEEEECTTTCC---------SCEE--EEEECTT---------------SSCEEEEETTSEEEEEETT
T ss_pred CCEEEEEECCCCCccEEEecCCCC---------CceE--EEEECCC---------------CCEEEEEecCCcEEEEeCC
Confidence 689999999999988776311110 0010 1222221 1234455678999999999
Q ss_pred CCceEEEecCCCCcceeeeccCCCCCCCCCCCCCCCccCCCceEEEEecCCeeeeEEEEE---cccceEEEEECCCCcE-
Q 039692 231 SGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAV---QKSGFAWAFDRDSGDI- 306 (417)
Q Consensus 231 tG~~~W~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~p~v~~~~~~G~~~~~v~~~---~~~G~l~ald~~tG~~- 306 (417)
+++.+..+...... ..+.-.....+ +..++++ +.++.+..+|..+++.
T Consensus 207 ~~~~~~~~~~~~~~-------------------------~~~~~~~~~~~---~~~l~~g~~~~~d~~i~iwd~~~~~~~ 258 (402)
T 2aq5_A 207 KGTVVAEKDRPHEG-------------------------TRPVHAVFVSE---GKILTTGFSRMSERQVALWDTKHLEEP 258 (402)
T ss_dssp TTEEEEEEECSSCS-------------------------SSCCEEEECST---TEEEEEEECTTCCEEEEEEETTBCSSC
T ss_pred CCceeeeeccCCCC-------------------------CcceEEEEcCC---CcEEEEeccCCCCceEEEEcCccccCC
Confidence 99998877322211 00111111223 3466666 6899999999999865
Q ss_pred EEEeecCCCCCCCcceecc--cccCCeEEEEec-cCCceeeeecC
Q 039692 307 IWFKLAGPGGREGGGVWGA--ATDGRRVYTNIV-NNDRIIWSTAD 348 (417)
Q Consensus 307 lW~~~~~~~~~~g~~~~~~--~~~~~~vy~~~~-~~~~~~W~~~~ 348 (417)
+-....... .....+ ..++..+++... ++.-.+|....
T Consensus 259 ~~~~~~~~~----~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~ 299 (402)
T 2aq5_A 259 LSLQELDTS----SGVLLPFFDPDTNIVYLCGKGDSSIRYFEITS 299 (402)
T ss_dssp SEEEECCCC----SSCEEEEEETTTTEEEEEETTCSCEEEEEECS
T ss_pred ceEEeccCC----CceeEEEEcCCCCEEEEEEcCCCeEEEEEecC
Confidence 333332211 111222 235566766553 44466777654
No 145
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=95.83 E-value=1.3 Score=41.94 Aligned_cols=107 Identities=12% Similarity=0.067 Sum_probs=65.7
Q ss_pred ECCEEEEecc------CCcEEEEECCCCccceEeecccc--cCCccee---eEEee---------eeeEEEEEecCCCce
Q 039692 47 ANGVVYFPSW------NGYLYAVNAFNGALIWEQNLSKL--TGLSGTG---IVVNV---------TVAVVVAVSRSNGEL 106 (417)
Q Consensus 47 ~~g~v~v~~~------~g~l~ald~~tG~~~W~~~~~~~--~~~~p~~---~v~~~---------~v~~l~ald~~tG~~ 106 (417)
....+|+.+. ++.++.||.++|+++=+...+.. +..+|-+ .+... ..+.+..+|.+++++
T Consensus 14 ~~~~~yv~~~~~~~~~d~~v~v~D~~t~~~~~~i~~g~~p~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~ 93 (361)
T 2oiz_A 14 QENRIYVMDSVFMHLTESRVHVYDYTNGKFLGMVPTAFNGHVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTF 93 (361)
T ss_dssp GGGEEEEEECCGGGGGGCEEEEEETTTCCEEEEEECCEEEEEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCE
T ss_pred CCCEEEEECCCCCccccCeEEEEECCCCeEEEEecCCCCCceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcE
Confidence 3457888753 57999999999998766555421 1112211 11110 124699999999999
Q ss_pred eeeeecCCCC------CcceeeceeEEcCeEEEEeCCccCccccCcccCCCceEEEEeCCCCceece
Q 039692 107 VWSTQIDPRP------RSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQ 167 (417)
Q Consensus 107 ~W~~~~~~~~------~~~~~~sp~v~~~~v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~~~W~ 167 (417)
+-+.++.... ...+..+| .+..+|+.... .++.|..+|.++++++-+
T Consensus 94 ~~~i~~~~~~~~~g~~p~~i~~sp--dg~~l~v~n~~------------~~~~v~v~d~~~~~~~~~ 146 (361)
T 2oiz_A 94 EKEISLPPKRVQGLNYDGLFRQTT--DGKFIVLQNAS------------PATSIGIVDVAKGDYVED 146 (361)
T ss_dssp EEEEEECTTBCCBCCCGGGEEECT--TSSEEEEEEES------------SSEEEEEEETTTTEEEEE
T ss_pred EEEEEcCccccccCCCcceEEECC--CCCEEEEECCC------------CCCeEEEEECCCCcEEEE
Confidence 9888764211 11223333 24468887532 136899999999988755
No 146
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=95.75 E-value=0.87 Score=40.37 Aligned_cols=97 Identities=18% Similarity=0.118 Sum_probs=47.3
Q ss_pred CCEEEE-e-ccCCcEEEEECCCCccceEeecccccCCcceeeEE--ee--e----eeEEEEEecCCCceeeeeecCCCCC
Q 039692 48 NGVVYF-P-SWNGYLYAVNAFNGALIWEQNLSKLTGLSGTGIVV--NV--T----VAVVVAVSRSNGELVWSTQIDPRPR 117 (417)
Q Consensus 48 ~g~v~v-~-~~~g~l~ald~~tG~~~W~~~~~~~~~~~p~~~v~--~~--~----v~~l~ald~~tG~~~W~~~~~~~~~ 117 (417)
++.+|+ + ..++.|+.+|..+++. ........ ..|.++.. ++ + .+.|+.+|..+ +..+........
T Consensus 34 ~g~l~v~~~~~~~~i~~~~~~~~~~-~~~~~~~~--~~p~~i~~~~~g~l~v~~~~~~i~~~d~~~-~~~~~~~~~~~~- 108 (270)
T 1rwi_B 34 AGNVYVTSEGMYGRVVKLATGSTGT-TVLPFNGL--YQPQGLAVDGAGTVYVTDFNNRVVTLAAGS-NNQTVLPFDGLN- 108 (270)
T ss_dssp TCCEEEEECSSSCEEEEECC------EECCCCSC--CSCCCEEECTTCCEEEEETTTEEEEECTTC-SCCEECCCCSCS-
T ss_pred CCCEEEEccCCCCcEEEecCCCccc-ceEeeCCc--CCcceeEECCCCCEEEEcCCCEEEEEeCCC-ceEeeeecCCcC-
Confidence 568898 7 4578999999865543 33222211 12322221 12 1 25788888654 344433322100
Q ss_pred cceeeceeEE-cCeEEEEeCCccCccccCcccCCCceEEEEeCCCCce
Q 039692 118 SQITMSGSVY-MGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRI 164 (417)
Q Consensus 118 ~~~~~sp~v~-~~~v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~~ 164 (417)
.....++. ++.+|+.... ++.|+.+|..+...
T Consensus 109 --~p~~i~~~~~g~l~v~~~~-------------~~~i~~~~~~~~~~ 141 (270)
T 1rwi_B 109 --YPEGLAVDTQGAVYVADRG-------------NNRVVKLAAGSKTQ 141 (270)
T ss_dssp --SEEEEEECTTCCEEEEEGG-------------GTEEEEECTTCCSC
T ss_pred --CCcceEECCCCCEEEEECC-------------CCEEEEEECCCcee
Confidence 11111222 5678887653 47899997654443
No 147
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=95.74 E-value=0.37 Score=45.50 Aligned_cols=110 Identities=14% Similarity=0.229 Sum_probs=64.1
Q ss_pred ceeeCcEEEC--CEEEEec-cCCcEEEEECCCCccceEeeccccc--C---CcceeeEE-----ee--e-----------
Q 039692 39 DISATPAVAN--GVVYFPS-WNGYLYAVNAFNGALIWEQNLSKLT--G---LSGTGIVV-----NV--T----------- 92 (417)
Q Consensus 39 ~~~~~p~~~~--g~v~v~~-~~g~l~ald~~tG~~~W~~~~~~~~--~---~~p~~~v~-----~~--~----------- 92 (417)
.+.-.|.... +++|+++ ..+.|+++|+.+|.. .+..++... . ..+.++.. ++ .
T Consensus 13 ~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~-~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~ 91 (334)
T 2p9w_A 13 LTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSH-FNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNF 91 (334)
T ss_dssp CCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCE-EEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCT
T ss_pred cCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeE-EEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEcccccccc
Confidence 3445566654 8999999 579999999975533 344333211 0 01122222 11 1
Q ss_pred -------eeEEEEEecC---CCceeeeeecCCCCCc-------c--eeeceeEE-cCeEEEEeCCccCccccCcccCCC-
Q 039692 93 -------VAVVVAVSRS---NGELVWSTQIDPRPRS-------Q--ITMSGSVY-MGAFYVGLSSLEEALPADQCCTFR- 151 (417)
Q Consensus 93 -------v~~l~ald~~---tG~~~W~~~~~~~~~~-------~--~~~sp~v~-~~~v~v~~~~~~~~~~~~~~~~~~- 151 (417)
...|.++|+. ||+++|...+...... . ...-.++. +|.+||..+- .
T Consensus 92 ~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~-------------~~ 158 (334)
T 2p9w_A 92 ADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFAL-------------GM 158 (334)
T ss_dssp TSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEE-------------SS
T ss_pred cccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCC-------------CC
Confidence 1569999999 9999999986421100 0 01111122 5678884432 4
Q ss_pred ceEEEEeCCCCc
Q 039692 152 GSLAKLDVRNGR 163 (417)
Q Consensus 152 g~l~ald~~tG~ 163 (417)
+.|+.+|++ |+
T Consensus 159 ~~I~rV~pd-G~ 169 (334)
T 2p9w_A 159 PAIARVSAD-GK 169 (334)
T ss_dssp CEEEEECTT-SC
T ss_pred CeEEEEeCC-CC
Confidence 689999986 66
No 148
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=95.73 E-value=1.4 Score=41.46 Aligned_cols=187 Identities=9% Similarity=-0.046 Sum_probs=101.9
Q ss_pred CEEEEeccCCcEEEEECCCCccceEeecccccC------Ccc-ee--eEEeeeeeEEEEEecCCCceeeeeecCCCCCc-
Q 039692 49 GVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG------LSG-TG--IVVNVTVAVVVAVSRSNGELVWSTQIDPRPRS- 118 (417)
Q Consensus 49 g~v~v~~~~g~l~ald~~tG~~~W~~~~~~~~~------~~p-~~--~v~~~~v~~l~ald~~tG~~~W~~~~~~~~~~- 118 (417)
..++.++.++.|..+|..+++..-......... .+| .+ ++.....+.+..+|..+ +.+-..........
T Consensus 87 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~-~~~~~~~~~~~~~~~ 165 (383)
T 3ei3_B 87 TTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGATTLRDFSG-SVIQVFAKTDSWDYW 165 (383)
T ss_dssp TEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTTEEEEEETTS-CEEEEEECCCCSSCC
T ss_pred CEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCCCEEEEEECCC-CceEEEeccCCCCCC
Confidence 478888889999999999998877765422111 111 00 01111227788888764 44333332211111
Q ss_pred --ceeeceeEEcCeEEEEeCCccCccccCcccCCCceEEEEeCCCCceeceeeecCCCCCCCCCCCCccccCCCceeecc
Q 039692 119 --QITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYSGAAVWGSSPAIDVI 196 (417)
Q Consensus 119 --~~~~sp~v~~~~v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~~gg~~~~~~pa~d~~ 196 (417)
.+..+| .+..++++.. ++.|..+|. +++.+.++...... +. ..++.+.
T Consensus 166 v~~~~~~~--~~~~l~~~~~--------------d~~i~i~d~-~~~~~~~~~~h~~~-----------v~--~~~~~~~ 215 (383)
T 3ei3_B 166 YCCVDVSV--SRQMLATGDS--------------TGRLLLLGL-DGHEIFKEKLHKAK-----------VT--HAEFNPR 215 (383)
T ss_dssp EEEEEEET--TTTEEEEEET--------------TSEEEEEET-TSCEEEEEECSSSC-----------EE--EEEECSS
T ss_pred eEEEEECC--CCCEEEEECC--------------CCCEEEEEC-CCCEEEEeccCCCc-----------EE--EEEECCC
Confidence 112222 1334555554 689999998 58887776542110 10 1222221
Q ss_pred cCcccCCCCCCCCCCCCcccCCCCCCeEEEEECCC----CceEEEecCCCCcceeeeccCCCCCCCCCCCCCCCccCCCc
Q 039692 197 RRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDS----GRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAP 272 (417)
Q Consensus 197 ~~~~~~~~~~~p~~~~~~v~~~~~~~~l~ald~~t----G~~~W~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~p 272 (417)
.. ..++.+..++.+..+|.++ ++.+-...... ..
T Consensus 216 ~~--------------~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~----------------------------~v 253 (383)
T 3ei3_B 216 CD--------------WLMATSSVDATVKLWDLRNIKDKNSYIAEMPHEK----------------------------PV 253 (383)
T ss_dssp CT--------------TEEEEEETTSEEEEEEGGGCCSTTCEEEEEECSS----------------------------CE
T ss_pred CC--------------CEEEEEeCCCEEEEEeCCCCCcccceEEEecCCC----------------------------ce
Confidence 11 1234556678888888887 44544442111 11
Q ss_pred eEEEEec-CCeeeeEEEEEcccceEEEEECCCCcEEEEee
Q 039692 273 MLLTIST-NGRFRDVVVAVQKSGFAWAFDRDSGDIIWFKL 311 (417)
Q Consensus 273 ~v~~~~~-~G~~~~~v~~~~~~G~l~ald~~tG~~lW~~~ 311 (417)
.-..... + +..|+.++.++.+...|..+++.+-...
T Consensus 254 ~~~~~s~~~---~~~l~~~~~d~~i~iwd~~~~~~~~~~~ 290 (383)
T 3ei3_B 254 NAAYFNPTD---STKLLTTDQRNEIRVYSSYDWSKPDQII 290 (383)
T ss_dssp EEEEECTTT---SCEEEEEESSSEEEEEETTBTTSCSEEE
T ss_pred EEEEEcCCC---CCEEEEEcCCCcEEEEECCCCccccccc
Confidence 1111222 3 3578888889999999999987765444
No 149
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=95.65 E-value=1.3 Score=45.73 Aligned_cols=195 Identities=9% Similarity=0.009 Sum_probs=104.9
Q ss_pred CEEEEeccCCcEEEEECCCCccceEe---ecccccC------Cccee--eEEeeeeeEEEEEecCCCceeeeeecCCCCC
Q 039692 49 GVVYFPSWNGYLYAVNAFNGALIWEQ---NLSKLTG------LSGTG--IVVNVTVAVVVAVSRSNGELVWSTQIDPRPR 117 (417)
Q Consensus 49 g~v~v~~~~g~l~ald~~tG~~~W~~---~~~~~~~------~~p~~--~v~~~~v~~l~ald~~tG~~~W~~~~~~~~~ 117 (417)
+.|+.++.++.|...|..+++..+.. .+.+... .+|.+ ++..+..+.|...|..+|+.+-++.......
T Consensus 396 ~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~~v 475 (694)
T 3dm0_A 396 DIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDV 475 (694)
T ss_dssp SEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCE
T ss_pred CEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEECCCCcceeEEeCCCCCE
Confidence 35677788999999998776544322 1111111 11111 1112233889999999998877665322111
Q ss_pred cceeeceeEEcCeEEEEeCCccCccccCcccCCCceEEEEeCCCCceeceeeecCCCCCCCCCCCCccccCCCceeeccc
Q 039692 118 SQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYSGAAVWGSSPAIDVIR 197 (417)
Q Consensus 118 ~~~~~sp~v~~~~v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~~gg~~~~~~pa~d~~~ 197 (417)
..+..+| .+..++.++. ++.|...|.. +.............. ..+ ...++.+.
T Consensus 476 ~~~~~s~--~~~~l~s~s~--------------D~~i~iwd~~-~~~~~~~~~~~~~h~-------~~v--~~~~~~~~- 528 (694)
T 3dm0_A 476 LSVAFSL--DNRQIVSASR--------------DRTIKLWNTL-GECKYTISEGGEGHR-------DWV--SCVRFSPN- 528 (694)
T ss_dssp EEEEECT--TSSCEEEEET--------------TSCEEEECTT-SCEEEEECSSTTSCS-------SCE--EEEEECSC-
T ss_pred EEEEEeC--CCCEEEEEeC--------------CCEEEEEECC-CCcceeeccCCCCCC-------CcE--EEEEEeCC-
Confidence 1122223 1334555544 6888888875 444433322111000 000 01112111
Q ss_pred CcccCCCCCCCCCCCCcccCCCCCCeEEEEECCCCceEEEecCCCCcceeeeccCCCCCCCCCCCCCCCccCCCceEEEE
Q 039692 198 RQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTI 277 (417)
Q Consensus 198 ~~~~~~~~~~p~~~~~~v~~~~~~~~l~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~p~v~~~ 277 (417)
.....+..++.++.+...|.++++.+-........ ..-...
T Consensus 529 ------------~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~h~~~---------------------------v~~v~~ 569 (694)
T 3dm0_A 529 ------------TLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGY---------------------------VSTVAV 569 (694)
T ss_dssp ------------SSSCEEEEEETTSCEEEEETTTCCEEEEECCCSSC---------------------------EEEEEE
T ss_pred ------------CCcceEEEEeCCCeEEEEECCCCcEEEEEcCCCCC---------------------------EEEEEE
Confidence 11123445667888999999998887655432211 011122
Q ss_pred ecCCeeeeEEEEEcccceEEEEECCCCcEEEEeec
Q 039692 278 STNGRFRDVVVAVQKSGFAWAFDRDSGDIIWFKLA 312 (417)
Q Consensus 278 ~~~G~~~~~v~~~~~~G~l~ald~~tG~~lW~~~~ 312 (417)
..+ ++.|+.++.||.+...|..+|+.+.+...
T Consensus 570 spd---g~~l~sg~~Dg~i~iwd~~~~~~~~~~~~ 601 (694)
T 3dm0_A 570 SPD---GSLCASGGKDGVVLLWDLAEGKKLYSLEA 601 (694)
T ss_dssp CTT---SSEEEEEETTSBCEEEETTTTEEEECCBC
T ss_pred eCC---CCEEEEEeCCCeEEEEECCCCceEEEecC
Confidence 233 35788889999999999999998877653
No 150
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=95.49 E-value=0.53 Score=45.29 Aligned_cols=216 Identities=11% Similarity=0.027 Sum_probs=112.4
Q ss_pred CCEEEEeccCCcEEEEECC---CCccceEeeccc--ccCCcc------e-ee-----------EEeeeeeEEEEEecCCC
Q 039692 48 NGVVYFPSWNGYLYAVNAF---NGALIWEQNLSK--LTGLSG------T-GI-----------VVNVTVAVVVAVSRSNG 104 (417)
Q Consensus 48 ~g~v~v~~~~g~l~ald~~---tG~~~W~~~~~~--~~~~~p------~-~~-----------v~~~~v~~l~ald~~tG 104 (417)
+..++.++.++.|..+|.+ +|+.+-...... .+...| . .+ +.....+.++.+|..++
T Consensus 123 ~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~ 202 (437)
T 3gre_A 123 FDAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTL 202 (437)
T ss_dssp SSEEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTC
T ss_pred CCEEEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCC
Confidence 3467777888999888874 565443222110 000001 0 00 11112289999999999
Q ss_pred ceeeeeecC--CCCCcceeeceeEEcCeEEEEeCCccCccccCcccCCCceEEEEeCCCCceeceeeecCCCCCCCCCCC
Q 039692 105 ELVWSTQID--PRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYS 182 (417)
Q Consensus 105 ~~~W~~~~~--~~~~~~~~~sp~v~~~~v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~~ 182 (417)
+.+.+.... ......+..+| .+..++.+.. ++.|..+|.++++.+-++.....
T Consensus 203 ~~~~~~~~~~h~~~v~~~~~s~--~~~~l~s~~~--------------dg~i~iwd~~~~~~~~~~~~~~~--------- 257 (437)
T 3gre_A 203 ERLQIIENSPRHGAVSSICIDE--ECCVLILGTT--------------RGIIDIWDIRFNVLIRSWSFGDH--------- 257 (437)
T ss_dssp CEEEEEECCGGGCCEEEEEECT--TSCEEEEEET--------------TSCEEEEETTTTEEEEEEBCTTC---------
T ss_pred eeeEEEccCCCCCceEEEEECC--CCCEEEEEcC--------------CCeEEEEEcCCccEEEEEecCCC---------
Confidence 999988852 11111122233 1334555554 68999999999988766543110
Q ss_pred CccccCCCceeecccCcccCCCCCCCCCCCCcccCCCCCCeEEEEECCCCceEEEecCCCCcceeeeccCCCCCCCCCC-
Q 039692 183 GAAVWGSSPAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPG- 261 (417)
Q Consensus 183 gg~~~~~~pa~d~~~~~~~~~~~~~p~~~~~~v~~~~~~~~l~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~c~~~- 261 (417)
..+. ..++.+. ..| ....+..+..++.+..+|.++|+.+-.+.......+...- .+..
T Consensus 258 -~~v~--~~~~~~~---------~s~--~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~-------~~~~~ 316 (437)
T 3gre_A 258 -APIT--HVEVCQF---------YGK--NSVIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHF-------LPIEK 316 (437)
T ss_dssp -EEEE--EEEECTT---------TCT--TEEEEEEESTTEEEEEEETTTTEEEEEEESSSSCCCGGGG-------SCBCS
T ss_pred -CceE--EEEeccc---------cCC--CccEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCcccee-------ccccc
Confidence 0000 0011000 000 1123455677889999999999988777644321110000 0000
Q ss_pred CCCCCcc----CCCceEEEEecCCeeeeEEEEEcccceEEEEECCCCcEEEEeec
Q 039692 262 PNLDADF----GEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDIIWFKLA 312 (417)
Q Consensus 262 ~~~~~~~----~~~p~v~~~~~~G~~~~~v~~~~~~G~l~ald~~tG~~lW~~~~ 312 (417)
...+..+ ...++ ..+..+. ++.|+.++.||.++..|..+++.+-....
T Consensus 317 ~l~~~~~~~~~~~~~v-~~l~~~~--~~~l~s~~~d~~i~~wd~~~~~~~~~~~~ 368 (437)
T 3gre_A 317 GLEELNFCGIRSLNAL-STISVSN--DKILLTDEATSSIVMFSLNELSSSKAVIS 368 (437)
T ss_dssp SGGGCCCCCCCSGGGG-CCEEEET--TEEEEEEGGGTEEEEEETTCGGGCEEEEC
T ss_pred ccccceecccccCCce-EEEEECC--ceEEEecCCCCeEEEEECCCcccceEEec
Confidence 0000000 00011 0111111 36788899999999999999987766553
No 151
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=95.46 E-value=0.34 Score=43.15 Aligned_cols=98 Identities=16% Similarity=0.162 Sum_probs=51.9
Q ss_pred CCEEEEeccCCcEEEEECCCCccceEeecccccCCcceeeEE--ee--ee-----eEEEEEecCCCceeeeeecCCCCCc
Q 039692 48 NGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTGLSGTGIVV--NV--TV-----AVVVAVSRSNGELVWSTQIDPRPRS 118 (417)
Q Consensus 48 ~g~v~v~~~~g~l~ald~~tG~~~W~~~~~~~~~~~p~~~v~--~~--~v-----~~l~ald~~tG~~~W~~~~~~~~~~ 118 (417)
++.+|+++.++.|+.+|++ |+.......... ..|.++.. ++ ++ +.|+.+|..+.+.............
T Consensus 77 ~g~l~v~~~~~~i~~~d~~-~~~~~~~~~~~~--~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~ 153 (270)
T 1rwi_B 77 AGTVYVTDFNNRVVTLAAG-SNNQTVLPFDGL--NYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPD 153 (270)
T ss_dssp TCCEEEEETTTEEEEECTT-CSCCEECCCCSC--SSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECCCCSCCSCC
T ss_pred CCCEEEEcCCCEEEEEeCC-CceEeeeecCCc--CCCcceEECCCCCEEEEECCCCEEEEEECCCceeEeeccccCCCce
Confidence 5689998877899999985 445454433221 12333222 12 11 5677776544433322111100001
Q ss_pred ceeeceeEEcCeEEEEeCCccCccccCcccCCCceEEEEeCCCCce
Q 039692 119 QITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRI 164 (417)
Q Consensus 119 ~~~~sp~v~~~~v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~~ 164 (417)
.+...| ++.+|+.... ++.|+.+|.+++..
T Consensus 154 ~i~~~~---~g~l~v~~~~-------------~~~i~~~~~~~~~~ 183 (270)
T 1rwi_B 154 GVAVDN---SGNVYVTDTD-------------NNRVVKLEAESNNQ 183 (270)
T ss_dssp CEEECT---TCCEEEEEGG-------------GTEEEEECTTTCCE
T ss_pred eEEEeC---CCCEEEEECC-------------CCEEEEEecCCCce
Confidence 122222 5778887653 47899999876554
No 152
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=95.46 E-value=1.9 Score=41.32 Aligned_cols=225 Identities=9% Similarity=-0.044 Sum_probs=113.0
Q ss_pred CCEEEEeccCCcEEEEECCCCccceEeecccccCC--cce--eeEEeeeeeEEEEEecCCCce-eeeeecCCCCCcceee
Q 039692 48 NGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTGL--SGT--GIVVNVTVAVVVAVSRSNGEL-VWSTQIDPRPRSQITM 122 (417)
Q Consensus 48 ~g~v~v~~~~g~l~ald~~tG~~~W~~~~~~~~~~--~p~--~~v~~~~v~~l~ald~~tG~~-~W~~~~~~~~~~~~~~ 122 (417)
+..++.++.++.|...|.++|+.+........... +.. .++.....+.+...|..+... +-+..........+..
T Consensus 159 g~~lasgs~Dg~v~iWd~~~~~~~~~~~~h~~~v~~~s~~~~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~ 238 (420)
T 4gga_A 159 GNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRW 238 (420)
T ss_dssp SSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEE
T ss_pred CCEEEEEECCCeEEEEEcCCCcEEEEEeCCCCceEEEeeCCCEEEEEeCCCceeEeeecccceeeEEecccccceeeeee
Confidence 45777888999999999999999887765421110 000 001111125666666544322 2222211111011111
Q ss_pred ceeEEcCe-EEEEeCCccCccccCcccCCCceEEEEeCCCCceeceeeecCCCCCCCCCCCCccccCCCceeecccCccc
Q 039692 123 SGSVYMGA-FYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYSGAAVWGSSPAIDVIRRQKQ 201 (417)
Q Consensus 123 sp~v~~~~-v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~~gg~~~~~~pa~d~~~~~~~ 201 (417)
.| ++. ++.+.. ++.+...|..+++..+.......... +.+. ..++.+...
T Consensus 239 ~~---~g~~l~s~~~--------------D~~v~i~~~~~~~~~~~~~~~~~~~~-------~~V~--~~~~~p~~~--- 289 (420)
T 4gga_A 239 AP---DGRHLASGGN--------------DNLVNVWPSAPGEGGWVPLQTFTQHQ-------GAVK--AVAWCPWQS--- 289 (420)
T ss_dssp CT---TSSEEEEEET--------------TSCEEEEESSCCSSCSCCSEEECCCS-------SCEE--EEEECTTCT---
T ss_pred cC---CCCeeeeeec--------------cccceEEeeccccccceeeeeecccC-------Ccee--eeeeCCCcc---
Confidence 12 333 444433 68888888888876543221110000 0000 011111100
Q ss_pred CCCCCCCCCCCCc-ccCCCCCCeEEEEECCCCceEEEecCCCCcceeeeccCCCCCCCCCCCCCCCccCCCceEEEEecC
Q 039692 202 NNQTTKPTHPDQC-ISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTISTN 280 (417)
Q Consensus 202 ~~~~~~p~~~~~~-v~~~~~~~~l~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~p~v~~~~~~ 280 (417)
.-. ...++.++.|...|..+|+.+.......... . ++ ...+
T Consensus 290 ----------~~la~~~gs~D~~I~iwd~~t~~~~~~~~~~~~v~-------------------------~-~~--~~~~ 331 (420)
T 4gga_A 290 ----------NVLATGGGTSDRHIRIWNVCSGACLSAVDAHSQVC-------------------------S-IL--WSPH 331 (420)
T ss_dssp ----------TEEEEEECTTTCEEEEEETTTTEEEEEEECSSCEE-------------------------E-EE--EETT
T ss_pred ----------cEEEEEeecCCCEEEEEeCCccccceeecccccee-------------------------e-ee--ecCC
Confidence 000 1134567889999999999988776543210 0 11 1123
Q ss_pred CeeeeEEEEE--cccceEEEEECCCCcEEEEeecCCCCCCCcceeccc--ccCCeEEEEeccCCceeeeec
Q 039692 281 GRFRDVVVAV--QKSGFAWAFDRDSGDIIWFKLAGPGGREGGGVWGAA--TDGRRVYTNIVNNDRIIWSTA 347 (417)
Q Consensus 281 G~~~~~v~~~--~~~G~l~ald~~tG~~lW~~~~~~~~~~g~~~~~~~--~~~~~vy~~~~~~~~~~W~~~ 347 (417)
+ +.++++ ..++.++..|..+++++.+... ..+ ....++ .++..|.....+..-.+|+..
T Consensus 332 ~---~~lv~~sg~~d~~I~iwd~~~~~~v~~l~g----H~~-~V~~l~~spdg~~l~S~s~D~tvriWdv~ 394 (420)
T 4gga_A 332 Y---KELISGHGFAQNQLVIWKYPTMAKVAELKG----HTS-RVLSLTMSPDGATVASAAADETLRLWRCF 394 (420)
T ss_dssp T---TEEEEEECTTTCCEEEEETTTCCEEEEECC----CSS-CEEEEEECTTSSCEEEEETTTEEEEECCS
T ss_pred C---CeEEEEEecCCCEEEEEECCCCcEEEEEcC----CCC-CEEEEEEcCCCCEEEEEecCCeEEEEECC
Confidence 2 234433 3689999999999999887753 111 122233 345555555555556778764
No 153
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=95.39 E-value=1.7 Score=40.19 Aligned_cols=46 Identities=13% Similarity=0.034 Sum_probs=27.2
Q ss_pred cceEEEEECCCCcEEEEeecCCCCCCCcceecccccCCeEEEEeccCC
Q 039692 293 SGFAWAFDRDSGDIIWFKLAGPGGREGGGVWGAATDGRRVYTNIVNND 340 (417)
Q Consensus 293 ~G~l~ald~~tG~~lW~~~~~~~~~~g~~~~~~~~~~~~vy~~~~~~~ 340 (417)
.+.++.+|+ +|+++-....+.+... .....++..++.||+.+....
T Consensus 259 ~~~v~~~d~-~G~~~~~~~~~~g~~~-~~~~~~~~~~g~L~v~~~~~~ 304 (322)
T 2fp8_A 259 DPKGIKFDE-FGNILEVIPLPPPFAG-EHFEQIQEHDGLLYIGTLFHG 304 (322)
T ss_dssp EEEEEEECT-TSCEEEEEECCTTTTT-SCCCEEEEETTEEEEECSSCS
T ss_pred ccEEEEECC-CCCEEEEEECCCCCcc-ccceEEEEeCCEEEEeecCCC
Confidence 467999997 4887766654321100 111123456789999876554
No 154
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=95.34 E-value=0.76 Score=44.10 Aligned_cols=68 Identities=7% Similarity=-0.139 Sum_probs=47.2
Q ss_pred EECCEEEEeccC-C----cEEEEECCCCccceEeeccccc--CCccee---eEEee---------eeeEEEEEecCCCce
Q 039692 46 VANGVVYFPSWN-G----YLYAVNAFNGALIWEQNLSKLT--GLSGTG---IVVNV---------TVAVVVAVSRSNGEL 106 (417)
Q Consensus 46 ~~~g~v~v~~~~-g----~l~ald~~tG~~~W~~~~~~~~--~~~p~~---~v~~~---------~v~~l~ald~~tG~~ 106 (417)
....++|+.+.. + .|..||.++++++=++.++..- ..+|-+ .+... ..+.|..+|+.|+++
T Consensus 29 ~~~~~~yV~~~~~~~~~d~vsvID~~t~~v~~~i~vG~~P~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~v 108 (368)
T 1mda_H 29 AISRRSHITLPAYFAGTTENWVSCAGCGVTLGHSLGAFLSLAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLP 108 (368)
T ss_dssp CCTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECTTCEEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCE
T ss_pred CCCCeEEEECCccCCccceEEEEECCCCeEEEEEeCCCCCceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCE
Confidence 345789998753 2 7999999999999888876421 112211 11111 136799999999999
Q ss_pred eeeeecC
Q 039692 107 VWSTQID 113 (417)
Q Consensus 107 ~W~~~~~ 113 (417)
+-+++++
T Consensus 109 v~~I~v~ 115 (368)
T 1mda_H 109 IADIELP 115 (368)
T ss_dssp EEEEEET
T ss_pred EEEEECC
Confidence 9998875
No 155
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=95.30 E-value=0.39 Score=45.62 Aligned_cols=186 Identities=10% Similarity=-0.034 Sum_probs=102.6
Q ss_pred CCEEEEeccCCcEEEEECCCCc------cceEeecc----cccC---Ccce---eeEEeeeeeEEEEEecCCCceeeeee
Q 039692 48 NGVVYFPSWNGYLYAVNAFNGA------LIWEQNLS----KLTG---LSGT---GIVVNVTVAVVVAVSRSNGELVWSTQ 111 (417)
Q Consensus 48 ~g~v~v~~~~g~l~ald~~tG~------~~W~~~~~----~~~~---~~p~---~~v~~~~v~~l~ald~~tG~~~W~~~ 111 (417)
+..++.++.++.|+.+|.++++ ........ ..+. .+|. -++.....+.+..+|..+++.+.+..
T Consensus 126 ~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~ 205 (416)
T 2pm9_A 126 DNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLS 205 (416)
T ss_dssp TTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEEC
T ss_pred CCEEEEEcCCCeEEEEECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEe
Confidence 3467777888999999999887 33332111 1110 1111 01111123889999999999988877
Q ss_pred cCC------CCCcceeeceeEEcC--eEEEEeCCccCccccCcccCCCc---eEEEEeCCCCc-eeceee-ecCCCCCCC
Q 039692 112 IDP------RPRSQITMSGSVYMG--AFYVGLSSLEEALPADQCCTFRG---SLAKLDVRNGR-IIWQTY-MLPDNGGKR 178 (417)
Q Consensus 112 ~~~------~~~~~~~~sp~v~~~--~v~v~~~~~~~~~~~~~~~~~~g---~l~ald~~tG~-~~W~~~-~~~~~~~~~ 178 (417)
... .....+..+| ++ .++++.. ++ .|..+|.++++ ++..+. ...
T Consensus 206 ~~~~~~~~~~~v~~~~~~~---~~~~~l~~~~~--------------d~~~~~i~~~d~~~~~~~~~~~~~~~~------ 262 (416)
T 2pm9_A 206 YTSPNSGIKQQLSVVEWHP---KNSTRVATATG--------------SDNDPSILIWDLRNANTPLQTLNQGHQ------ 262 (416)
T ss_dssp CCCCSSCCCCCEEEEEECS---SCTTEEEEEEC--------------CSSSCCCCEEETTSTTSCSBCCCSCCS------
T ss_pred ccccccccCCceEEEEECC---CCCCEEEEEEC--------------CCCCceEEEEeCCCCCCCcEEeecCcc------
Confidence 542 1111122222 33 3444443 35 89999998874 333322 100
Q ss_pred CCCCCccccCCCceeecccCcccCCCCCCCCCCCCcccCCCCCCeEEEEECCCCceEEEecCCCCcceeeeccCCCCCCC
Q 039692 179 GGYSGAAVWGSSPAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDC 258 (417)
Q Consensus 179 ~~~~gg~~~~~~pa~d~~~~~~~~~~~~~p~~~~~~v~~~~~~~~l~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~c 258 (417)
..+. ..++.+. ....+..+..++.+..+|.++++.+-.+........
T Consensus 263 -----~~v~--~~~~s~~--------------~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~v~------------ 309 (416)
T 2pm9_A 263 -----KGIL--SLDWCHQ--------------DEHLLLSSGRDNTVLLWNPESAEQLSQFPARGNWCF------------ 309 (416)
T ss_dssp -----SCEE--EEEECSS--------------CSSCEEEEESSSEEEEECSSSCCEEEEEECSSSCCC------------
T ss_pred -----Ccee--EEEeCCC--------------CCCeEEEEeCCCCEEEeeCCCCccceeecCCCCceE------------
Confidence 0010 1222220 112344556788999999999998877764332110
Q ss_pred CCCCCCCCccCCCceEEEEecCCeeeeEEEEEcccceEEEEECCCCcE
Q 039692 259 PPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDI 306 (417)
Q Consensus 259 ~~~~~~~~~~~~~p~v~~~~~~G~~~~~v~~~~~~G~l~ald~~tG~~ 306 (417)
. + ....+| ...++.++.||.+...|..+++.
T Consensus 310 ------------~-~--~~s~~~--~~~l~s~~~d~~i~iw~~~~~~~ 340 (416)
T 2pm9_A 310 ------------K-T--KFAPEA--PDLFACASFDNKIEVQTLQNLTN 340 (416)
T ss_dssp ------------C-E--EECTTC--TTEEEECCSSSEEEEEESCCCCC
T ss_pred ------------E-E--EECCCC--CCEEEEEecCCcEEEEEccCCCC
Confidence 1 1 111222 25777888899999999887754
No 156
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=95.27 E-value=0.83 Score=42.99 Aligned_cols=149 Identities=13% Similarity=0.005 Sum_probs=84.0
Q ss_pred CEEEEeccCCcEEEEECCCCccceEeecccc-c---CCcce----eeEEeeeeeEEEEEecCCCceeeeeecCCCCCcce
Q 039692 49 GVVYFPSWNGYLYAVNAFNGALIWEQNLSKL-T---GLSGT----GIVVNVTVAVVVAVSRSNGELVWSTQIDPRPRSQI 120 (417)
Q Consensus 49 g~v~v~~~~g~l~ald~~tG~~~W~~~~~~~-~---~~~p~----~~v~~~~v~~l~ald~~tG~~~W~~~~~~~~~~~~ 120 (417)
..++.++.++.+...|.++|+.+-.+..... + ..+|. -++..+..+.++..|..+|+.+-.+.........+
T Consensus 167 ~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~~~~h~~~v~~v 246 (354)
T 2pbi_B 167 MQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHESDVNSV 246 (354)
T ss_dssp SEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEE
T ss_pred CEEEEEeCCCcEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCeEEE
Confidence 4677888899999999999998766553321 1 11111 01222234889999999998876665322211112
Q ss_pred eeceeEEcCeEEEEeCCccCccccCcccCCCceEEEEeCCCCceeceeeecCCCCCCCCCCCCccccCCCceeecccCcc
Q 039692 121 TMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYSGAAVWGSSPAIDVIRRQK 200 (417)
Q Consensus 121 ~~sp~v~~~~v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~~gg~~~~~~pa~d~~~~~~ 200 (417)
..+| .+..++.+.. ++.|..+|.++++.+-.+........ + ...++.+.
T Consensus 247 ~~~p--~~~~l~s~s~--------------D~~v~lwd~~~~~~~~~~~~~~~~~~---------~--~~~~~s~~---- 295 (354)
T 2pbi_B 247 RYYP--SGDAFASGSD--------------DATCRLYDLRADREVAIYSKESIIFG---------A--SSVDFSLS---- 295 (354)
T ss_dssp EECT--TSSEEEEEET--------------TSCEEEEETTTTEEEEEECCTTCCSC---------E--EEEEECTT----
T ss_pred EEeC--CCCEEEEEeC--------------CCeEEEEECCCCcEEEEEcCCCcccc---------e--eEEEEeCC----
Confidence 2233 1334555544 68999999998876644332110000 0 01111111
Q ss_pred cCCCCCCCCCCCCcccCCCCCCeEEEEECCCCceEEEec
Q 039692 201 QNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKP 239 (417)
Q Consensus 201 ~~~~~~~p~~~~~~v~~~~~~~~l~ald~~tG~~~W~~~ 239 (417)
...+..+..++.+..+|..+|+.+-...
T Consensus 296 -----------g~~l~~g~~d~~i~vwd~~~~~~~~~l~ 323 (354)
T 2pbi_B 296 -----------GRLLFAGYNDYTINVWDVLKGSRVSILF 323 (354)
T ss_dssp -----------SSEEEEEETTSCEEEEETTTCSEEEEEC
T ss_pred -----------CCEEEEEECCCcEEEEECCCCceEEEEE
Confidence 1234445567889999998888765443
No 157
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=95.25 E-value=1.7 Score=45.04 Aligned_cols=26 Identities=15% Similarity=0.065 Sum_probs=18.8
Q ss_pred EEEEecc-CC-----cEEEEECCCCccceEee
Q 039692 50 VVYFPSW-NG-----YLYAVNAFNGALIWEQN 75 (417)
Q Consensus 50 ~v~v~~~-~g-----~l~ald~~tG~~~W~~~ 75 (417)
.|+..+. ++ .|+.+|.++|+..-...
T Consensus 50 ~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~ 81 (741)
T 2ecf_A 50 RVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVD 81 (741)
T ss_dssp EEEEEECCSSCTTEEEEEEEETTTCCEEEEEC
T ss_pred EEEEEeccCCCCcccEEEEEECCCCceeEccc
Confidence 5666665 66 89999999998654443
No 158
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=95.17 E-value=1.7 Score=40.70 Aligned_cols=29 Identities=7% Similarity=-0.025 Sum_probs=21.6
Q ss_pred CCEEEEeccCCcEEEEECCCCccceEeec
Q 039692 48 NGVVYFPSWNGYLYAVNAFNGALIWEQNL 76 (417)
Q Consensus 48 ~g~v~v~~~~g~l~ald~~tG~~~W~~~~ 76 (417)
+..|++...+..|+.+|+++|+..-....
T Consensus 92 g~~l~~~~~~~~l~~~d~~~g~~~~~~~~ 120 (388)
T 3pe7_A 92 DDALFYVKDGRNLMRVDLATLEENVVYQV 120 (388)
T ss_dssp SSEEEEEETTTEEEEEETTTCCEEEEEEC
T ss_pred CCEEEEEeCCCeEEEEECCCCcceeeeec
Confidence 33677777778999999999987644443
No 159
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=95.11 E-value=1.1 Score=41.58 Aligned_cols=62 Identities=5% Similarity=-0.115 Sum_probs=34.8
Q ss_pred eeEEEEEecCCCc--eeeeeecCCCCCcceeeceeEEcCeEEEEeCCccCccccCcccCCCceEEEEeCCCCceeceeee
Q 039692 93 VAVVVAVSRSNGE--LVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYM 170 (417)
Q Consensus 93 v~~l~ald~~tG~--~~W~~~~~~~~~~~~~~sp~v~~~~v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~~~W~~~~ 170 (417)
.+.++.+|.++++ .+-++.........+..+| .+..++.+.. ++.|..+|.++++..-....
T Consensus 29 d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~--~~~~l~~~~~--------------dg~i~vwd~~~~~~~~~~~~ 92 (372)
T 1k8k_C 29 NHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAP--DSNRIVTCGT--------------DRNAYVWTLKGRTWKPTLVI 92 (372)
T ss_dssp SSEEEEEEEETTEEEEEEEEECCSSCEEEEEEET--TTTEEEEEET--------------TSCEEEEEEETTEEEEEEEC
T ss_pred CCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeC--CCCEEEEEcC--------------CCeEEEEECCCCeeeeeEEe
Confidence 3677778877776 5555542211111122223 1334555554 58899999988876555443
No 160
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=95.08 E-value=1.8 Score=38.93 Aligned_cols=64 Identities=13% Similarity=0.117 Sum_probs=42.3
Q ss_pred CCEEEEeccCCcEEEEECCCCccceEeecccccC------Cccee--eEEeeeeeEEEEEecCCCceeeeeec
Q 039692 48 NGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG------LSGTG--IVVNVTVAVVVAVSRSNGELVWSTQI 112 (417)
Q Consensus 48 ~g~v~v~~~~g~l~ald~~tG~~~W~~~~~~~~~------~~p~~--~v~~~~v~~l~ald~~tG~~~W~~~~ 112 (417)
++.|.++ .++.|+..|.+||+.+-.++...... .+|.+ ++..+..+.+...|.++|+.+.+.+.
T Consensus 36 ~~~lAvg-~D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~~~ 107 (318)
T 4ggc_A 36 GNVLAVA-LDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTS 107 (318)
T ss_dssp TSEEEEE-ETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEEC
T ss_pred CCEEEEE-eCCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEEEecC
Confidence 4545554 58899999999999887776543211 11211 12222348899999999999888774
No 161
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=95.00 E-value=2 Score=39.77 Aligned_cols=57 Identities=9% Similarity=0.060 Sum_probs=33.0
Q ss_pred EEEEEecCCCceeeeeecC-CCCCcceeeceeEEcCeEEEEeCCccCccccCcccCCCceEEEEeCCCCcee
Q 039692 95 VVVAVSRSNGELVWSTQID-PRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRII 165 (417)
Q Consensus 95 ~l~ald~~tG~~~W~~~~~-~~~~~~~~~sp~v~~~~v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~~~ 165 (417)
.++.+|.++|++....... ......+..+| ++++|+..... .++.|+.+|.++|+..
T Consensus 19 ~v~~~d~~tg~~~~~~~~~~~~~p~~~a~sp---dg~l~~~~~~~-----------~~~~v~~~~~~~g~~~ 76 (347)
T 3hfq_A 19 YQGTLDTTAKTLTNDGLLAATQNPTYLALSA---KDCLYSVDKED-----------DEGGIAAWQIDGQTAH 76 (347)
T ss_dssp EEEEEETTTTEEEEEEEEEECSCCCCEEECT---TCEEEEEEEET-----------TEEEEEEEEEETTEEE
T ss_pred EEEEEcCCCCeEEEeeeeeccCCcceEEEcc---CCeEEEEEecC-----------CCceEEEEEecCCcEE
Confidence 4788888889876533221 11111233344 67777765411 1368999999878743
No 162
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=94.93 E-value=1.6 Score=42.13 Aligned_cols=103 Identities=12% Similarity=-0.019 Sum_probs=54.7
Q ss_pred CEEEEeccCCcEEEEECCCCccceEeeccc---ccC---Ccce---eeEEeeeeeEEEEEecCCCceeeeeecCCCCC--
Q 039692 49 GVVYFPSWNGYLYAVNAFNGALIWEQNLSK---LTG---LSGT---GIVVNVTVAVVVAVSRSNGELVWSTQIDPRPR-- 117 (417)
Q Consensus 49 g~v~v~~~~g~l~ald~~tG~~~W~~~~~~---~~~---~~p~---~~v~~~~v~~l~ald~~tG~~~W~~~~~~~~~-- 117 (417)
..|..++.+|.|...|..+++..=...+.+ .+. .+|. -++..+..+.|...|.+++...-.........
T Consensus 133 ~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~ 212 (435)
T 4e54_B 133 STVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGNILRVFASSDTINIWF 212 (435)
T ss_dssp TCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETTSCEEEEEECCSSCSCCC
T ss_pred CEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccCCceeEEeccCCCCccE
Confidence 367778889999999998887544443322 111 1221 01112233778888887665543333221110
Q ss_pred cceeeceeEEcCe-EEEEeCCccCccccCcccCCCceEEEEeCCCCceeceee
Q 039692 118 SQITMSGSVYMGA-FYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTY 169 (417)
Q Consensus 118 ~~~~~sp~v~~~~-v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~~~W~~~ 169 (417)
..+..+| ++. ++++.. ++.|..+|.+ |+.+.++.
T Consensus 213 ~~~~~~~---~~~~l~~g~~--------------dg~i~~wd~~-~~~~~~~~ 247 (435)
T 4e54_B 213 CSLDVSA---SSRMVVTGDN--------------VGNVILLNMD-GKELWNLR 247 (435)
T ss_dssp CCEEEET---TTTEEEEECS--------------SSBEEEEESS-SCBCCCSB
T ss_pred EEEEECC---CCCEEEEEeC--------------CCcEeeeccC-cceeEEEe
Confidence 1111122 343 444444 6899999986 66665543
No 163
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=94.92 E-value=2 Score=44.28 Aligned_cols=53 Identities=11% Similarity=0.088 Sum_probs=32.7
Q ss_pred eEEEEEecCCCceeeeeecCCCCCcceeeceeEEcCe-EEEEeCCccCccccCcccCCCceEEEEeCCC-----Ccee
Q 039692 94 AVVVAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGA-FYVGLSSLEEALPADQCCTFRGSLAKLDVRN-----GRII 165 (417)
Q Consensus 94 ~~l~ald~~tG~~~W~~~~~~~~~~~~~~sp~v~~~~-v~v~~~~~~~~~~~~~~~~~~g~l~ald~~t-----G~~~ 165 (417)
+.++.+|.++|++.-....... ...+..+| ++. +++. . ++.|+.+|..+ |+.+
T Consensus 101 ~~i~~~d~~~~~~~~l~~~~~~-~~~~~~Sp---dG~~la~~-~--------------~~~i~v~~~~~~~~~~g~~~ 159 (706)
T 2z3z_A 101 GGLVGFDMLARKVTYLFDTNEE-TASLDFSP---VGDRVAYV-R--------------NHNLYIARGGKLGEGMSRAI 159 (706)
T ss_dssp TEEEEEETTTTEEEEEECCTTC-CTTCEECT---TSSEEEEE-E--------------TTEEEEEECBCTTSCCCCCE
T ss_pred CEEEEEECCCCceEEccCCccc-ccCCcCCC---CCCEEEEE-E--------------CCeEEEEecCcccccCCCcE
Confidence 8899999988876543332221 12233444 554 4443 3 47899999988 7765
No 164
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=94.89 E-value=0.77 Score=46.85 Aligned_cols=90 Identities=12% Similarity=0.020 Sum_probs=57.7
Q ss_pred ECCEEEEecc-CCcEEEEECCCCccceEeecccc---cCC---c-cee---eEE---------ee--------eeeEEEE
Q 039692 47 ANGVVYFPSW-NGYLYAVNAFNGALIWEQNLSKL---TGL---S-GTG---IVV---------NV--------TVAVVVA 98 (417)
Q Consensus 47 ~~g~v~v~~~-~g~l~ald~~tG~~~W~~~~~~~---~~~---~-p~~---~v~---------~~--------~v~~l~a 98 (417)
.+..+|+.+. +++|..||+++.|.....+++.. -.. + |.+ .++ ++ ..+.+.+
T Consensus 100 DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtv 179 (595)
T 1fwx_A 100 DGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTA 179 (595)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEE
T ss_pred CCCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEEE
Confidence 4557999774 56799999999998875554321 111 1 211 111 11 2279999
Q ss_pred EecCCCceeeeeecCCCCCcceeeceeEEcCeEEEEeCCcc
Q 039692 99 VSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLE 139 (417)
Q Consensus 99 ld~~tG~~~W~~~~~~~~~~~~~~sp~v~~~~v~v~~~~~~ 139 (417)
+|.++.+++|+..+++.+ ..+..+| .+..+|+.+.+.+
T Consensus 180 ID~~t~~v~~qI~Vgg~p-d~~~~sp--dGk~~~vt~~~se 217 (595)
T 1fwx_A 180 VDADKWEVAWQVLVSGNL-DNCDADY--EGKWAFSTSYNSE 217 (595)
T ss_dssp EETTTTEEEEEEEESSCC-CCEEECS--SSSEEEEEESCTT
T ss_pred EECCCCeEEEEEEeCCCc-cceEECC--CCCEEEEEecCcc
Confidence 999999999999986543 2344555 2556777776543
No 165
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=94.89 E-value=2.3 Score=39.09 Aligned_cols=108 Identities=13% Similarity=0.056 Sum_probs=55.9
Q ss_pred CEEEEeccCCcEEEEECCCCccceEeeccc-c--cC-Ccce-----eeEEeee-----------eeEEEEEecCCCceee
Q 039692 49 GVVYFPSWNGYLYAVNAFNGALIWEQNLSK-L--TG-LSGT-----GIVVNVT-----------VAVVVAVSRSNGELVW 108 (417)
Q Consensus 49 g~v~v~~~~g~l~ald~~tG~~~W~~~~~~-~--~~-~~p~-----~~v~~~~-----------v~~l~ald~~tG~~~W 108 (417)
+.||+... ..++++|+.+++ |+..... + .. .+.+ ..+..|. ...++++|..+++ |
T Consensus 5 ~~l~~~GG-~~~~~yd~~~~~--W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~--W 79 (315)
T 4asc_A 5 DLIFMISE-EGAVAYDPAANE--CYCASLSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSE--W 79 (315)
T ss_dssp EEEEEEET-TEEEEEETTTTE--EEEEECCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTE--E
T ss_pred eEEEEEcC-CceEEECCCCCe--EecCCCCCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCe--E
Confidence 34444433 579999998776 9862211 1 10 0001 0112221 1348999988765 7
Q ss_pred eeecCCCCCcceeeceeEEcCeEEEEeCCccCccccCcccCCCceEEEEeCCCCceeceee
Q 039692 109 STQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTY 169 (417)
Q Consensus 109 ~~~~~~~~~~~~~~sp~v~~~~v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~~~W~~~ 169 (417)
+.- ...+......+-++.++.+|+....... ........++++|+.+.+ |+.-
T Consensus 80 ~~~-~~~p~~r~~~~~~~~~~~lyv~GG~~~~-----~~~~~~~~~~~~d~~~~~--W~~~ 132 (315)
T 4asc_A 80 LGM-PPLPSPRCLFGLGEALNSIYVVGGREIK-----DGERCLDSVMCYDRLSFK--WGES 132 (315)
T ss_dssp EEC-CCBSSCEESCEEEEETTEEEEECCEESS-----TTCCBCCCEEEEETTTTE--EEEC
T ss_pred EEC-CCCCcchhceeEEEECCEEEEEeCCcCC-----CCCcccceEEEECCCCCc--EeEC
Confidence 654 2222222233445678888875442100 000123579999998764 8753
No 166
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=94.85 E-value=2.3 Score=38.96 Aligned_cols=112 Identities=11% Similarity=0.037 Sum_probs=57.1
Q ss_pred eCcEEE-CCEEEEe-ccCCcEEEEECCCCccceEeecccccCCcceeeEE--ee--ee---------eEEEEEecCCCce
Q 039692 42 ATPAVA-NGVVYFP-SWNGYLYAVNAFNGALIWEQNLSKLTGLSGTGIVV--NV--TV---------AVVVAVSRSNGEL 106 (417)
Q Consensus 42 ~~p~~~-~g~v~v~-~~~g~l~ald~~tG~~~W~~~~~~~~~~~p~~~v~--~~--~v---------~~l~ald~~tG~~ 106 (417)
..|++. ++.+|+. ..++.|+.+|+++|+..-...... ..|..+.. ++ .+ +.|+.+|.++++.
T Consensus 48 ~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~---~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~ 124 (333)
T 2dg1_A 48 EGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFVSHK---ANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNL 124 (333)
T ss_dssp EEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECSS---SSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSC
T ss_pred cCcEECCCCCEEEEECCCCEEEEEeCCCCcEEEEeeCCC---CCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEE
Confidence 445554 6678764 567899999998887542221111 11222111 11 11 3788999887765
Q ss_pred eeeeecCCCCCcceeeceeEE-cCeEEEEeCCccCccccCcccCCCceEEEEeCCCCcee
Q 039692 107 VWSTQIDPRPRSQITMSGSVY-MGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRII 165 (417)
Q Consensus 107 ~W~~~~~~~~~~~~~~sp~v~-~~~v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~~~ 165 (417)
.-....... .. ......+. ++.+|++...... ....+.|+.+|.++++..
T Consensus 125 ~~~~~~~~~-~~-~~~~i~~d~~g~l~v~~~~~~~-------~~~~~~l~~~~~~~~~~~ 175 (333)
T 2dg1_A 125 QDIIEDLST-AY-CIDDMVFDSKGGFYFTDFRGYS-------TNPLGGVYYVSPDFRTVT 175 (333)
T ss_dssp EEEECSSSS-CC-CEEEEEECTTSCEEEEECCCBT-------TBCCEEEEEECTTSCCEE
T ss_pred EEEEccCcc-CC-cccceEECCCCCEEEEeccccc-------cCCCceEEEEeCCCCEEE
Confidence 412211111 00 11111222 6778887653110 001368999998876654
No 167
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=94.82 E-value=3.5 Score=40.92 Aligned_cols=211 Identities=15% Similarity=0.160 Sum_probs=106.9
Q ss_pred CEEEEeccCCcEEEEECCCCccceEeecccc-c---CCccee--eEEeeeeeEEEEEecCCCceeeeeecCCCCCcceee
Q 039692 49 GVVYFPSWNGYLYAVNAFNGALIWEQNLSKL-T---GLSGTG--IVVNVTVAVVVAVSRSNGELVWSTQIDPRPRSQITM 122 (417)
Q Consensus 49 g~v~v~~~~g~l~ald~~tG~~~W~~~~~~~-~---~~~p~~--~v~~~~v~~l~ald~~tG~~~W~~~~~~~~~~~~~~ 122 (417)
..++.++.++.+..+|. +|+.+-....... + ..+|.+ ++.....+.++.+| .+|+.+-+..........+..
T Consensus 357 ~~l~~~~~dg~v~~~~~-~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~~v~~~~-~~~~~~~~~~~~~~~v~~~~~ 434 (577)
T 2ymu_A 357 QTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWN-RNGQLLQTLTGHSSSVWGVAF 434 (577)
T ss_dssp SEEEEEETTSEEEEEET-TCCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEEC-TTCCEEEEEECCSSCEEEEEE
T ss_pred CEEEEEeCCCEEEEEcC-CCCEEEEecCCCCCeEEEEECCCCCEEEEEeCCCEEEEEe-CCCCEEEEecCCCCCeEEEEE
Confidence 35666777888888885 6777665543321 1 011111 11111226778888 467776655532221111222
Q ss_pred ceeEEcCe-EEEEeCCccCccccCcccCCCceEEEEeCCCCceeceeeecCCCCCCCCCCCCccccCCCceeecccCccc
Q 039692 123 SGSVYMGA-FYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYSGAAVWGSSPAIDVIRRQKQ 201 (417)
Q Consensus 123 sp~v~~~~-v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~~gg~~~~~~pa~d~~~~~~~ 201 (417)
+| ++. +..+.. ++.|..+|. +++.+-+...... .+. ..++.++
T Consensus 435 s~---d~~~l~~~~~--------------d~~v~~w~~-~~~~~~~~~~~~~-----------~v~--~~~~spd----- 478 (577)
T 2ymu_A 435 SP---DDQTIASASD--------------DKTVKLWNR-NGQLLQTLTGHSS-----------SVR--GVAFSPD----- 478 (577)
T ss_dssp CT---TSSEEEEEET--------------TSEEEEEET-TSCEEEEEECCSS-----------CEE--EEEECTT-----
T ss_pred CC---CCCEEEEEcC--------------CCEEEEEEC-CCCEEEEEcCCCC-----------CEE--EEEEcCC-----
Confidence 33 444 444443 578888886 5776655433110 000 1122221
Q ss_pred CCCCCCCCCCCCcccCCCCCCeEEEEECCCCceEEEecCCCCcceeeeccCCCCCCCCCCCCCCCccCCCceEEEEecCC
Q 039692 202 NNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTISTNG 281 (417)
Q Consensus 202 ~~~~~~p~~~~~~v~~~~~~~~l~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~p~v~~~~~~G 281 (417)
...+..+..++.+...| .+|+.+..+...... ..-.....+|
T Consensus 479 ----------~~~las~~~d~~i~iw~-~~~~~~~~~~~h~~~---------------------------v~~l~~s~dg 520 (577)
T 2ymu_A 479 ----------GQTIASASDDKTVKLWN-RNGQLLQTLTGHSSS---------------------------VRGVAFSPDG 520 (577)
T ss_dssp ----------SCEEEEEETTSEEEEEE-TTSCEEEEEECCSSC---------------------------EEEEEECTTS
T ss_pred ----------CCEEEEEeCCCEEEEEc-CCCCEEEEEeCCCCC---------------------------EEEEEEcCCC
Confidence 11233445567788888 468777666532211 1111223344
Q ss_pred eeeeEEEEEcccceEEEEECCCCcEEEEeecCCCCCCCcceecc--cccCCeEEEEeccCCceee
Q 039692 282 RFRDVVVAVQKSGFAWAFDRDSGDIIWFKLAGPGGREGGGVWGA--ATDGRRVYTNIVNNDRIIW 344 (417)
Q Consensus 282 ~~~~~v~~~~~~G~l~ald~~tG~~lW~~~~~~~~~~g~~~~~~--~~~~~~vy~~~~~~~~~~W 344 (417)
+.|+.++.||.++..|. +|+.+-.... + . .....+ ..++..|.....+..-.+|
T Consensus 521 ---~~l~s~~~dg~v~lwd~-~~~~~~~~~~-h---~-~~v~~~~fs~dg~~l~s~~~D~~i~~W 576 (577)
T 2ymu_A 521 ---QTIASASDDKTVKLWNR-NGQLLQTLTG-H---S-SSVWGVAFSPDGQTIASASSDKTVKLW 576 (577)
T ss_dssp ---SCEEEEETTSEEEEECT-TSCEEEEEEC-C---S-SCEEEEEECTTSSCEEEEETTSCEEEE
T ss_pred ---CEEEEEECcCEEEEEeC-CCCEEEEEcC-C---C-CCEEEEEEcCCCCEEEEEeCCCEEEEe
Confidence 46777889999999995 6877765542 1 1 112222 2355555554444444556
No 168
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=94.77 E-value=2.3 Score=38.46 Aligned_cols=109 Identities=10% Similarity=-0.066 Sum_probs=56.5
Q ss_pred CCEEEEeccCCcEEEEECCCCccceEeecc--c---ccC---Ccce--e--eEEeeeeeEEEEEecCCCc---------e
Q 039692 48 NGVVYFPSWNGYLYAVNAFNGALIWEQNLS--K---LTG---LSGT--G--IVVNVTVAVVVAVSRSNGE---------L 106 (417)
Q Consensus 48 ~g~v~v~~~~g~l~ald~~tG~~~W~~~~~--~---~~~---~~p~--~--~v~~~~v~~l~ald~~tG~---------~ 106 (417)
+..++.++.++.|..+|..+++..++.... . .+. .+|. + ++..+..+.+..+|..+++ .
T Consensus 23 ~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~ 102 (351)
T 3f3f_A 23 GRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKLWEEDPDQEECSGRRWNK 102 (351)
T ss_dssp SSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEECTTSCTTSSCSEEE
T ss_pred CCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEEEecCCCcccccccCcce
Confidence 346777788999999999888766654321 1 110 1110 0 0111122777788877763 2
Q ss_pred eeeeecCCCCCcceeeceeEEcCeEEEEeCCccCccccCcccCCCceEEEEeCCCCceeceeee
Q 039692 107 VWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYM 170 (417)
Q Consensus 107 ~W~~~~~~~~~~~~~~sp~v~~~~v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~~~W~~~~ 170 (417)
+-...........+...|.-.+..++++.. ++.|..+|.++++.+-.+..
T Consensus 103 ~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~--------------dg~v~iwd~~~~~~~~~~~~ 152 (351)
T 3f3f_A 103 LCTLNDSKGSLYSVKFAPAHLGLKLACLGN--------------DGILRLYDALEPSDLRSWTL 152 (351)
T ss_dssp EEEECCCSSCEEEEEECCGGGCSEEEEEET--------------TCEEEEEECSSTTCTTCCEE
T ss_pred eeeecccCCceeEEEEcCCCCCcEEEEecC--------------CCcEEEecCCChHHhccccc
Confidence 333321111111111222000233555554 68999999999987655443
No 169
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=94.68 E-value=2.6 Score=38.72 Aligned_cols=194 Identities=11% Similarity=0.039 Sum_probs=100.6
Q ss_pred CEEEEeccCCcEEEEECCCCccce-----Eeeccc-cc---CCccee--eEEeeeeeEEEEEecCCCceeeeeecCCCCC
Q 039692 49 GVVYFPSWNGYLYAVNAFNGALIW-----EQNLSK-LT---GLSGTG--IVVNVTVAVVVAVSRSNGELVWSTQIDPRPR 117 (417)
Q Consensus 49 g~v~v~~~~g~l~ald~~tG~~~W-----~~~~~~-~~---~~~p~~--~v~~~~v~~l~ald~~tG~~~W~~~~~~~~~ 117 (417)
..++.++.|+.|...|..+.+... .++-.. .+ ..+|.+ ++.....+.+...|.++|+.+-++.......
T Consensus 31 ~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~v~~wd~~~~~~~~~~~~h~~~v 110 (319)
T 3frx_A 31 NLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGETYQRFVGHKSDV 110 (319)
T ss_dssp TEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCE
T ss_pred cEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEEeCCCEEEEEECCCCCeeEEEccCCCcE
Confidence 467777888888888875433322 222111 00 011111 1112233889999999999876665322111
Q ss_pred cceeeceeEEcCe-EEEEeCCccCccccCcccCCCceEEEEeCCCCceeceeeecCCCCCCCCCCCCccccCCCceeecc
Q 039692 118 SQITMSGSVYMGA-FYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYSGAAVWGSSPAIDVI 196 (417)
Q Consensus 118 ~~~~~sp~v~~~~-v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~~gg~~~~~~pa~d~~ 196 (417)
..+..+| ++. ++.+.. ++.+...|.+ ++.+-+...... .+ ....+.+.
T Consensus 111 ~~~~~~~---~~~~l~s~s~--------------D~~i~vwd~~-~~~~~~~~~h~~-----------~v--~~~~~~~~ 159 (319)
T 3frx_A 111 MSVDIDK---KASMIISGSR--------------DKTIKVWTIK-GQCLATLLGHND-----------WV--SQVRVVPN 159 (319)
T ss_dssp EEEEECT---TSCEEEEEET--------------TSCEEEEETT-SCEEEEECCCSS-----------CE--EEEEECCC
T ss_pred EEEEEcC---CCCEEEEEeC--------------CCeEEEEECC-CCeEEEEeccCC-----------cE--EEEEEccC
Confidence 1122222 333 444444 6888888886 444333221000 00 00111110
Q ss_pred cCcccCCCCCCCCCCCCcccCCCCCCeEEEEECCCCceEEEecCCCCcceeeeccCCCCCCCCCCCCCCCccCCCceEEE
Q 039692 197 RRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLT 276 (417)
Q Consensus 197 ~~~~~~~~~~~p~~~~~~v~~~~~~~~l~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~p~v~~ 276 (417)
.. .......+..+..++.+...|.++++..-.+....... .-..
T Consensus 160 ~~---------~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~v---------------------------~~~~ 203 (319)
T 3frx_A 160 EK---------ADDDSVTIISAGNDKMVKAWNLNQFQIEADFIGHNSNI---------------------------NTLT 203 (319)
T ss_dssp ---------------CCEEEEEETTSCEEEEETTTTEEEEEECCCCSCE---------------------------EEEE
T ss_pred CC---------CCCCccEEEEEeCCCEEEEEECCcchhheeecCCCCcE---------------------------EEEE
Confidence 00 00011124455667888899988887765544322110 1112
Q ss_pred EecCCeeeeEEEEEcccceEEEEECCCCcEEEEeec
Q 039692 277 ISTNGRFRDVVVAVQKSGFAWAFDRDSGDIIWFKLA 312 (417)
Q Consensus 277 ~~~~G~~~~~v~~~~~~G~l~ald~~tG~~lW~~~~ 312 (417)
...+ ++.|+.++.||.+...|..+++.+.....
T Consensus 204 ~sp~---g~~l~s~~~dg~i~iwd~~~~~~~~~~~~ 236 (319)
T 3frx_A 204 ASPD---GTLIASAGKDGEIMLWNLAAKKAMYTLSA 236 (319)
T ss_dssp ECTT---SSEEEEEETTCEEEEEETTTTEEEEEEEC
T ss_pred EcCC---CCEEEEEeCCCeEEEEECCCCcEEEEecC
Confidence 2233 35788889999999999999999887764
No 170
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=94.64 E-value=1 Score=41.96 Aligned_cols=100 Identities=5% Similarity=-0.068 Sum_probs=54.1
Q ss_pred CEEEEeccCCcEEEEECCCCccceEeecccc--c---CCcc--ee--eEEeeeeeEEEEEecCCCceeeeeecCCC-CCc
Q 039692 49 GVVYFPSWNGYLYAVNAFNGALIWEQNLSKL--T---GLSG--TG--IVVNVTVAVVVAVSRSNGELVWSTQIDPR-PRS 118 (417)
Q Consensus 49 g~v~v~~~~g~l~ald~~tG~~~W~~~~~~~--~---~~~p--~~--~v~~~~v~~l~ald~~tG~~~W~~~~~~~-~~~ 118 (417)
+.+.+-+.++.+..+|.++++++-....... + ..+| .+ ++..+..+.+..+|..+|+.......... ...
T Consensus 95 ~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~ 174 (343)
T 3lrv_A 95 NRLLLLYPGNQITILDSKTNKVLREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYS 174 (343)
T ss_dssp TEEEEEETTTEEEEEETTTCCEEEEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCC
T ss_pred CeEEEEEccCceEEeecCCcceeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceE
Confidence 3444444444555556667766655554321 1 1122 11 11122338899999999998655533221 111
Q ss_pred ceeeceeEEcCeEEE-EeCCccCccccCcccCCCceEEEEeCCCCcee
Q 039692 119 QITMSGSVYMGAFYV-GLSSLEEALPADQCCTFRGSLAKLDVRNGRII 165 (417)
Q Consensus 119 ~~~~sp~v~~~~v~v-~~~~~~~~~~~~~~~~~~g~l~ald~~tG~~~ 165 (417)
.+..+| ++.+++ +.. ++.|..+|.++++.+
T Consensus 175 ~~~~~p---dg~~lasg~~--------------dg~i~iwd~~~~~~~ 205 (343)
T 3lrv_A 175 SGVLHK---DSLLLALYSP--------------DGILDVYNLSSPDQA 205 (343)
T ss_dssp EEEECT---TSCEEEEECT--------------TSCEEEEESSCTTSC
T ss_pred EEEECC---CCCEEEEEcC--------------CCEEEEEECCCCCCC
Confidence 223333 455444 443 689999999999876
No 171
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=94.59 E-value=0.67 Score=43.08 Aligned_cols=108 Identities=12% Similarity=0.061 Sum_probs=57.4
Q ss_pred CCEEEEeccCCcEEEEECCCCc--cceEeeccc-ccC---Ccce--e--eEEeeeeeEEEEEecCCCceeeeeecCC--C
Q 039692 48 NGVVYFPSWNGYLYAVNAFNGA--LIWEQNLSK-LTG---LSGT--G--IVVNVTVAVVVAVSRSNGELVWSTQIDP--R 115 (417)
Q Consensus 48 ~g~v~v~~~~g~l~ald~~tG~--~~W~~~~~~-~~~---~~p~--~--~v~~~~v~~l~ald~~tG~~~W~~~~~~--~ 115 (417)
+..++.++.++.|..+|.++++ .+....... .+. .+|. + ++.....+.+..+|..+++..=...+.. .
T Consensus 69 ~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~ 148 (379)
T 3jrp_A 69 GTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAI 148 (379)
T ss_dssp CSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTT
T ss_pred CCEEEEeccCCEEEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCC
Confidence 4577788889999999999887 444433221 110 1111 0 1111123788888887774322222211 1
Q ss_pred CCcceeeceeE-----------EcCeEEEEeCCccCccccCcccCCCceEEEEeCCCCceeceee
Q 039692 116 PRSQITMSGSV-----------YMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTY 169 (417)
Q Consensus 116 ~~~~~~~sp~v-----------~~~~v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~~~W~~~ 169 (417)
....+...|.. .+..++++.. ++.|..+|.++++..+...
T Consensus 149 ~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--------------dg~i~i~d~~~~~~~~~~~ 199 (379)
T 3jrp_A 149 GVNSASWAPATIEEDGEHNGTKESRKFVTGGA--------------DNLVKIWKYNSDAQTYVLE 199 (379)
T ss_dssp CEEEEEECCCC----------CTTCEEEEEET--------------TSCEEEEEEETTTTEEEEE
T ss_pred ceEEEEEcCccccccccccCCCCCCEEEEEeC--------------CCeEEEEEecCCCcceeeE
Confidence 11112222210 1334555554 6899999998888776544
No 172
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=94.58 E-value=2.1 Score=41.45 Aligned_cols=146 Identities=8% Similarity=-0.073 Sum_probs=77.8
Q ss_pred EE-EEeccCCcEEEEECC--CCccceEeecc---ccc---CCccee--eEEeeeeeEEEEEecCCCceee----eeecCC
Q 039692 50 VV-YFPSWNGYLYAVNAF--NGALIWEQNLS---KLT---GLSGTG--IVVNVTVAVVVAVSRSNGELVW----STQIDP 114 (417)
Q Consensus 50 ~v-~v~~~~g~l~ald~~--tG~~~W~~~~~---~~~---~~~p~~--~v~~~~v~~l~ald~~tG~~~W----~~~~~~ 114 (417)
.+ +.++.++.|..+|.. +|+.+-.+... ..+ ..+|.+ ++.....+.++.+|..+++..- ......
T Consensus 116 ~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~ 195 (450)
T 2vdu_B 116 RLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTTVIIADKFGDVYSIDINSIPEEKFTQEPILGHV 195 (450)
T ss_dssp EEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTSCCCSSCCCCCSEECS
T ss_pred EEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCEEEEEeCCCcEEEEecCCcccccccceeeeccc
Confidence 44 556678999999988 78776555321 111 111211 1111122778888887776543 111111
Q ss_pred CCCcceeeceeEEc---Ce-EEEEeCCccCccccCcccCCCceEEEEeCCCCceeceeeecCCCCCCCCCCCCccccCCC
Q 039692 115 RPRSQITMSGSVYM---GA-FYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYSGAAVWGSS 190 (417)
Q Consensus 115 ~~~~~~~~sp~v~~---~~-v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~~gg~~~~~~ 190 (417)
.....+..+| + +. ++.+.. ++.|..+|..+++.+-++... .. +.+. .
T Consensus 196 ~~v~~~~~sp---~~~~~~~l~s~~~--------------d~~i~vwd~~~~~~~~~~~~~-h~---------~~v~--~ 246 (450)
T 2vdu_B 196 SMLTDVHLIK---DSDGHQFIITSDR--------------DEHIKISHYPQCFIVDKWLFG-HK---------HFVS--S 246 (450)
T ss_dssp SCEEEEEEEE---CTTSCEEEEEEET--------------TSCEEEEEESCTTCEEEECCC-CS---------SCEE--E
T ss_pred CceEEEEEcC---CCCCCcEEEEEcC--------------CCcEEEEECCCCceeeeeecC-CC---------CceE--E
Confidence 1101122222 4 54 444443 689999999988876553221 00 0011 1
Q ss_pred ceeecccCcccCCCCCCCCCCCCcccCCCCCCeEEEEECCCCceEEEecC
Q 039692 191 PAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPL 240 (417)
Q Consensus 191 pa~d~~~~~~~~~~~~~p~~~~~~v~~~~~~~~l~ald~~tG~~~W~~~~ 240 (417)
.++. + ...++.+..++.|..+|.++|+.+-.++.
T Consensus 247 ~~~s-d---------------~~~l~s~~~d~~v~vwd~~~~~~~~~~~~ 280 (450)
T 2vdu_B 247 ICCG-K---------------DYLLLSAGGDDKIFAWDWKTGKNLSTFDY 280 (450)
T ss_dssp EEEC-S---------------TTEEEEEESSSEEEEEETTTCCEEEEEEC
T ss_pred EEEC-C---------------CCEEEEEeCCCeEEEEECCCCcEeeeecc
Confidence 2222 1 12344556788999999999998877764
No 173
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=94.54 E-value=2.6 Score=38.05 Aligned_cols=26 Identities=15% Similarity=-0.127 Sum_probs=20.2
Q ss_pred CCEEEEecc-CCcEEEEECCCCccceE
Q 039692 48 NGVVYFPSW-NGYLYAVNAFNGALIWE 73 (417)
Q Consensus 48 ~g~v~v~~~-~g~l~ald~~tG~~~W~ 73 (417)
++.+|+++. ++.|+.+|+++|+...-
T Consensus 79 dg~l~v~~~~~~~i~~~d~~~g~~~~~ 105 (296)
T 3e5z_A 79 QGHLIACSHGLRRLERQREPGGEWESI 105 (296)
T ss_dssp TCCEEEEETTTTEEEEECSTTCCEEEE
T ss_pred CCcEEEEecCCCeEEEEcCCCCcEEEE
Confidence 677888775 47899999999986543
No 174
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=94.37 E-value=2 Score=41.10 Aligned_cols=111 Identities=17% Similarity=0.091 Sum_probs=68.4
Q ss_pred CceEEEEeCCCCceeceeeecCCCCCCCCCCCCccccCCCceeecccCcccCCCCCCCCCCCCcccCCCCCCeEEEEECC
Q 039692 151 RGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYSGAAVWGSSPAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDID 230 (417)
Q Consensus 151 ~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~~gg~~~~~~pa~d~~~~~~~~~~~~~p~~~~~~v~~~~~~~~l~ald~~ 230 (417)
++.|..+|.++++.+.++...+... .+. ..++.+. ...+..+..++.+..+|.+
T Consensus 191 d~~i~iwd~~~~~~~~~~~~~~h~~---------~v~--~~~~s~~---------------~~~l~s~~~dg~i~iwd~~ 244 (437)
T 3gre_A 191 LSRVIIFDIRTLERLQIIENSPRHG---------AVS--SICIDEE---------------CCVLILGTTRGIIDIWDIR 244 (437)
T ss_dssp TSEEEEEETTTCCEEEEEECCGGGC---------CEE--EEEECTT---------------SCEEEEEETTSCEEEEETT
T ss_pred CCeEEEEeCCCCeeeEEEccCCCCC---------ceE--EEEECCC---------------CCEEEEEcCCCeEEEEEcC
Confidence 6899999999999998877521110 010 1223222 1234456678899999999
Q ss_pred CCceEEEecCCCCcceeeeccCCCCCCCCCCCCCCCccCCCceEEEEecCCeeeeEEEEEcccceEEEEECCCCcEEEEe
Q 039692 231 SGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDIIWFK 310 (417)
Q Consensus 231 tG~~~W~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~p~v~~~~~~G~~~~~v~~~~~~G~l~ald~~tG~~lW~~ 310 (417)
+++.+-.+....... +.++ .-.|.+ ..+ +..++.++.||.+...|..+|+.+-..
T Consensus 245 ~~~~~~~~~~~~~~~--v~~~-----------------~~~~~~---s~~---~~~l~s~~~dg~i~iwd~~~~~~~~~~ 299 (437)
T 3gre_A 245 FNVLIRSWSFGDHAP--ITHV-----------------EVCQFY---GKN---SVIVVGGSSKTFLTIWNFVKGHCQYAF 299 (437)
T ss_dssp TTEEEEEEBCTTCEE--EEEE-----------------EECTTT---CTT---EEEEEEESTTEEEEEEETTTTEEEEEE
T ss_pred CccEEEEEecCCCCc--eEEE-----------------Eecccc---CCC---ccEEEEEcCCCcEEEEEcCCCcEEEEE
Confidence 999887766433210 0000 000000 011 457888899999999999999987766
Q ss_pred ec
Q 039692 311 LA 312 (417)
Q Consensus 311 ~~ 312 (417)
..
T Consensus 300 ~~ 301 (437)
T 3gre_A 300 IN 301 (437)
T ss_dssp ES
T ss_pred Ec
Confidence 63
No 175
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=94.34 E-value=3.4 Score=38.61 Aligned_cols=70 Identities=13% Similarity=0.025 Sum_probs=38.1
Q ss_pred cEEE-CC-EEEEecc-CC--cEEEEECCCCccceEeecccccC----Cccee--eEEeeeeeEEEEEecCCCceeeeeec
Q 039692 44 PAVA-NG-VVYFPSW-NG--YLYAVNAFNGALIWEQNLSKLTG----LSGTG--IVVNVTVAVVVAVSRSNGELVWSTQI 112 (417)
Q Consensus 44 p~~~-~g-~v~v~~~-~g--~l~ald~~tG~~~W~~~~~~~~~----~~p~~--~v~~~~v~~l~ald~~tG~~~W~~~~ 112 (417)
|... +| .|++.+. ++ .|+.+|+++|+.+-......... .+|-+ ++.......|+.+|+++|+..-..+.
T Consensus 41 ~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~g~~~~~~~~ 120 (388)
T 3pe7_A 41 KCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDDALFYVKDGRNLMRVDLATLEENVVYQV 120 (388)
T ss_dssp CCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSSSCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEEC
T ss_pred ccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCccceEEcCCCCEEEEEeCCCeEEEEECCCCcceeeeec
Confidence 5444 34 4555554 55 49999999988754333222111 12211 01110115899999999987655554
Q ss_pred C
Q 039692 113 D 113 (417)
Q Consensus 113 ~ 113 (417)
.
T Consensus 121 ~ 121 (388)
T 3pe7_A 121 P 121 (388)
T ss_dssp C
T ss_pred h
Confidence 3
No 176
>3elq_A Arylsulfate sulfotransferase; beta propeller, protein-substrate complex, periplasm, transesterification, phenol, bacteria; 2.00A {Escherichia coli} PDB: 3ett_A* 3ets_A*
Probab=94.13 E-value=0.26 Score=49.96 Aligned_cols=106 Identities=10% Similarity=0.119 Sum_probs=58.0
Q ss_pred cEEEEECCCCccceEeecccccCCcc-------eeeEE----ee-e----eeEEEEEecCCCceeeeeecCCCC---Ccc
Q 039692 59 YLYAVNAFNGALIWEQNLSKLTGLSG-------TGIVV----NV-T----VAVVVAVSRSNGELVWSTQIDPRP---RSQ 119 (417)
Q Consensus 59 ~l~ald~~tG~~~W~~~~~~~~~~~p-------~~~v~----~~-~----v~~l~ald~~tG~~~W~~~~~~~~---~~~ 119 (417)
..+.+|. +|+++|...........+ ..+.. ++ + -..++.+| .+|+++|++.++... .--
T Consensus 176 ~~~i~D~-~G~lrW~~~~~~~~~~~~~~~~~~g~l~~~~g~~nG~l~~g~G~~i~elD-~~Gkvv~~~~lp~g~~~~HHD 253 (571)
T 3elq_A 176 FTFIVDT-EGEYRWWLDQDTFYDGRDRDINKRGYLMGIRETPRGTFTAVQGQHWYEFD-MMGQVLEDHKLPRGFADATHE 253 (571)
T ss_dssp EEEEECT-TSCEEEECCGGGTCCSSSCCGGGCSCCEEEEECTTSCEEEEEBTEEEEEC-TTCCEEEEEECCTTEECBCSC
T ss_pred ceEEEcC-CCcEEEEeCcccccccceeeccCCCeEEEEEecCCCCEEEecCcEEEEEC-CCCcEEEEEECCCCccccccc
Confidence 3799996 899999988753211111 10111 11 1 14699999 489999999875321 000
Q ss_pred eeeceeEEcCeEEEEeCCccCccccCc--ccCCCceEEEEeCCCCceeceeeec
Q 039692 120 ITMSGSVYMGAFYVGLSSLEEALPADQ--CCTFRGSLAKLDVRNGRIIWQTYML 171 (417)
Q Consensus 120 ~~~sp~v~~~~v~v~~~~~~~~~~~~~--~~~~~g~l~ald~~tG~~~W~~~~~ 171 (417)
+.-.| +|.+++-........ .+. ....+..|+-+| .||+++|+....
T Consensus 254 ~~~l~---nGn~Lv~v~~~d~~~-~dG~~~~~vdD~I~EVD-~tGeVv~eW~~~ 302 (571)
T 3elq_A 254 SIETP---NGTVLLRVGKSNYRR-DDGVHVTTIRDHILEVD-KSGRVVDVWDLT 302 (571)
T ss_dssp EEECT---TSCEEEEEEETTEEC-TTSCEECCCSCEEEEEC-TTSCEEEEEEHH
T ss_pred eEEcC---CCcEEEEEecccccC-CCCcccceeccEEEEEC-CCCCEEEEEEhH
Confidence 11112 444433221100000 000 112367899999 899999998874
No 177
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=94.04 E-value=3.9 Score=38.21 Aligned_cols=225 Identities=13% Similarity=0.071 Sum_probs=114.3
Q ss_pred CCEEEEeccCCcEEEEECCCCccceEeecccccC--Ccce--ee-EEeeeeeEEEEEecCCCceeeeeecCCCCCcceee
Q 039692 48 NGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG--LSGT--GI-VVNVTVAVVVAVSRSNGELVWSTQIDPRPRSQITM 122 (417)
Q Consensus 48 ~g~v~v~~~~g~l~ald~~tG~~~W~~~~~~~~~--~~p~--~~-v~~~~v~~l~ald~~tG~~~W~~~~~~~~~~~~~~ 122 (417)
++.+++.+.+..+..+|.++++.+.+........ ..+. .+ +..+..+.+...|..+|+.+-+.+.... +.
T Consensus 30 dg~~la~g~~~~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iWd~~~~~~~~~~~~~~~----v~- 104 (355)
T 3vu4_A 30 DQSCLILSTLKSFEIYNVHPVAHIMSQEMRHLSKVRMLHRTNYVAFVTGVKEVVHIWDDVKKQDVSRIKVDAP----VK- 104 (355)
T ss_dssp TSSEEEEECSSEEEEEEETTEEEEEEEECSCCCEEEECTTSSEEEEECSSTTEEEEEETTTTEEEEEEECSSC----EE-
T ss_pred CCCEEEEEcCCEEEEEecCCcceeeeeecCCeEEEEEcCCCCEEEEEECCccEEEEEECCCCcEEEEEECCCc----eE-
Confidence 4444444334456778888887777666542110 0010 01 1111226899999999999887774421 11
Q ss_pred ceeEEcCeEEEEeCCccCccccCcccCCCceEEEEeCCCC-ceeceeeecCCCCCCCCCCCCccccCCCceeecccCccc
Q 039692 123 SGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNG-RIIWQTYMLPDNGGKRGGYSGAAVWGSSPAIDVIRRQKQ 201 (417)
Q Consensus 123 sp~v~~~~v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG-~~~W~~~~~~~~~~~~~~~~gg~~~~~~pa~d~~~~~~~ 201 (417)
+-....+.+++.. ++.++.+|..++ +.+.++.. +.. ..++.+
T Consensus 105 ~v~~~~~~~~~~~---------------~~~i~i~d~~~~~~~~~~~~~-~~~---------------~~~~s~------ 147 (355)
T 3vu4_A 105 DLFLSREFIVVSY---------------GDVISVFKFGNPWKRITDDIR-FGG---------------VCEFSN------ 147 (355)
T ss_dssp EEEECSSEEEEEE---------------TTEEEEEESSTTCCBSSCCEE-EEE---------------EEEEET------
T ss_pred EEEEcCCEEEEEE---------------cCEEEEEECCCCceeeEEecc-CCc---------------eEEEEc------
Confidence 1112345555554 368999999888 66665543 110 011111
Q ss_pred CCCCCCCCCCCCcccC-CCCCCeEEEEECCCCceEEEecCCCC--c----ceeeeccCCCCCCCCCCCCCCCccCCCceE
Q 039692 202 NNQTTKPTHPDQCISS-DIYANSIVALDIDSGRIAWAKPLGGY--D----IFYFTCLVPNNPDCPPGPNLDADFGEAPML 274 (417)
Q Consensus 202 ~~~~~~p~~~~~~v~~-~~~~~~l~ald~~tG~~~W~~~~~~~--~----~~~~~~~~~~~~~c~~~~~~~~~~~~~p~v 274 (417)
....+. +..++.+..+|.++++..-..+.... . ...+ .....++.
T Consensus 148 ----------~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~------------------~~h~~~v~ 199 (355)
T 3vu4_A 148 ----------GLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLI------------------KAHTNPIK 199 (355)
T ss_dssp ----------TEEEEEESSCTTCEEEEECCC------------------CCEEE------------------CCCSSCEE
T ss_pred ----------cEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEE------------------EccCCceE
Confidence 011112 45678888899888763211110000 0 0000 00011221
Q ss_pred -EEEecCCeeeeEEEEEcccce-EEEEECCCCcEEEEeecC-CCCCCCcceeccc--ccCCeEEEEeccCCceeeeecCC
Q 039692 275 -LTISTNGRFRDVVVAVQKSGF-AWAFDRDSGDIIWFKLAG-PGGREGGGVWGAA--TDGRRVYTNIVNNDRIIWSTADP 349 (417)
Q Consensus 275 -~~~~~~G~~~~~v~~~~~~G~-l~ald~~tG~~lW~~~~~-~~~~~g~~~~~~~--~~~~~vy~~~~~~~~~~W~~~~~ 349 (417)
.....+| ..++.++.||. +...|..+|+.+-+...+ .. .....++ .++..+.....+..-.+|..+..
T Consensus 200 ~~~~s~~g---~~l~s~s~d~~~v~iwd~~~~~~~~~~~~g~h~----~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~ 272 (355)
T 3vu4_A 200 MVRLNRKS---DMVATCSQDGTIIRVFKTEDGVLVREFRRGLDR----ADVVDMKWSTDGSKLAVVSDKWTLHVFEIFND 272 (355)
T ss_dssp EEEECTTS---SEEEEEETTCSEEEEEETTTCCEEEEEECTTCC----SCEEEEEECTTSCEEEEEETTCEEEEEESSCC
T ss_pred EEEECCCC---CEEEEEeCCCCEEEEEECCCCcEEEEEEcCCCC----CcEEEEEECCCCCEEEEEECCCEEEEEEccCC
Confidence 2223343 57888899998 999999999998877632 11 1122222 24555555555555678887543
No 178
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=93.92 E-value=3.8 Score=37.59 Aligned_cols=69 Identities=10% Similarity=0.021 Sum_probs=35.8
Q ss_pred eEEEEEecCCCceeeeeecCCCCCcceeeceeEEcCeEEEEeCCccCccccCcccCCCceEEEEeCCCCceecee
Q 039692 94 AVVVAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQT 168 (417)
Q Consensus 94 ~~l~ald~~tG~~~W~~~~~~~~~~~~~~sp~v~~~~v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~~~W~~ 168 (417)
..++++|..+++ |+..-.+.+......+.++.++.||+......... .........++++|+.+++ |+.
T Consensus 13 ~~~~~yd~~~~~--W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~--~~~~~~~~~~~~~d~~~~~--W~~ 81 (315)
T 4asc_A 13 EGAVAYDPAANE--CYCASLSSQVPKNHVSLVTKENQVFVAGGLFYNED--NKEDPMSAYFLQFDHLDSE--WLG 81 (315)
T ss_dssp TEEEEEETTTTE--EEEEECCCCSCSSEEEEECTTCCEEEEEEEEECSS--CSSSCEEEEEEEEETTTTE--EEE
T ss_pred CceEEECCCCCe--EecCCCCCCCCccceEEEEECCEEEEEcCcccCCC--CCccccccceEEecCCCCe--EEE
Confidence 568999998876 87642211112233344456777776433100000 0000112459999998764 753
No 179
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=93.91 E-value=1 Score=47.42 Aligned_cols=63 Identities=14% Similarity=0.214 Sum_probs=36.3
Q ss_pred eEEEEEcccceEEEEECCCCcEEEEeecCCCCCCCcceecc--cccCCeEEEEeccCCceeeeec
Q 039692 285 DVVVAVQKSGFAWAFDRDSGDIIWFKLAGPGGREGGGVWGA--ATDGRRVYTNIVNNDRIIWSTA 347 (417)
Q Consensus 285 ~~v~~~~~~G~l~ald~~tG~~lW~~~~~~~~~~g~~~~~~--~~~~~~vy~~~~~~~~~~W~~~ 347 (417)
..++.++.||.+...|..+++..+................+ ..++..++....++.-.+|...
T Consensus 220 ~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~Dg~I~vwd~~ 284 (753)
T 3jro_A 220 SYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKEN 284 (753)
T ss_dssp EEEEEEESSSCEEEEEESSSSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEECSSSCEECCBCC
T ss_pred CEEEEEecCCEEEEecCCCCCCcceeEEeccCCCCCceEEEEEcCCCCEEEEEcCCCEEEEEecC
Confidence 57888889999999999988654444331100001111122 2345566666666666677765
No 180
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=93.68 E-value=4.3 Score=37.49 Aligned_cols=112 Identities=14% Similarity=0.281 Sum_probs=58.4
Q ss_pred eeeCcEEEC--CEEEEec-cCCcEEEEECCCCccceEeecccccCCcceee--EEee--ee---eEEEEEecCCCceeee
Q 039692 40 ISATPAVAN--GVVYFPS-WNGYLYAVNAFNGALIWEQNLSKLTGLSGTGI--VVNV--TV---AVVVAVSRSNGELVWS 109 (417)
Q Consensus 40 ~~~~p~~~~--g~v~v~~-~~g~l~ald~~tG~~~W~~~~~~~~~~~p~~~--v~~~--~v---~~l~ald~~tG~~~W~ 109 (417)
+...|+... +.+|+.+ ..+.|+.+|.++|+.. .+..+.. +..+ ..++ .+ ..|+.+|.++|+..-.
T Consensus 50 ~~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~-~~~~~~~----v~~i~~~~dg~l~v~~~~gl~~~d~~~g~~~~~ 124 (326)
T 2ghs_A 50 LGEGPTFDPASGTAWWFNILERELHELHLASGRKT-VHALPFM----GSALAKISDSKQLIASDDGLFLRDTATGVLTLH 124 (326)
T ss_dssp BEEEEEEETTTTEEEEEEGGGTEEEEEETTTTEEE-EEECSSC----EEEEEEEETTEEEEEETTEEEEEETTTCCEEEE
T ss_pred CCcCCeEeCCCCEEEEEECCCCEEEEEECCCCcEE-EEECCCc----ceEEEEeCCCeEEEEECCCEEEEECCCCcEEEE
Confidence 445677763 5676665 5689999999888753 1222221 1111 1122 12 5589999989986533
Q ss_pred eecCCCCCcceeeceeEE-cCeEEEEeCCccCccccCcccCCCceEEEEeCCCCcee
Q 039692 110 TQIDPRPRSQITMSGSVY-MGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRII 165 (417)
Q Consensus 110 ~~~~~~~~~~~~~sp~v~-~~~v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~~~ 165 (417)
................+. ++++|++...... ....+.|+.+| +|+..
T Consensus 125 ~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~-------~~~~~~l~~~~--~g~~~ 172 (326)
T 2ghs_A 125 AELESDLPGNRSNDGRMHPSGALWIGTMGRKA-------ETGAGSIYHVA--KGKVT 172 (326)
T ss_dssp ECSSTTCTTEEEEEEEECTTSCEEEEEEETTC-------CTTCEEEEEEE--TTEEE
T ss_pred eeCCCCCCCCCCCCEEECCCCCEEEEeCCCcC-------CCCceEEEEEe--CCcEE
Confidence 332211100011111121 5678887642100 00136899999 57654
No 181
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=93.65 E-value=3.8 Score=36.74 Aligned_cols=30 Identities=0% Similarity=-0.140 Sum_probs=24.6
Q ss_pred CCEEEEeccCCcEEEEECCCCccceEeecc
Q 039692 48 NGVVYFPSWNGYLYAVNAFNGALIWEQNLS 77 (417)
Q Consensus 48 ~g~v~v~~~~g~l~ald~~tG~~~W~~~~~ 77 (417)
+..++.++.++.|...|.++|+.+......
T Consensus 79 ~~~l~sgs~Dg~v~iw~~~~~~~~~~~~~h 108 (318)
T 4ggc_A 79 GNYLAVGTSSAEVQLWDVQQQKRLRNMTSH 108 (318)
T ss_dssp SSEEEEEETTSEEEEEETTTTEEEEEEECC
T ss_pred CCEEEEEECCCcEEEeecCCceeEEEecCc
Confidence 346777788999999999999998877654
No 182
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=93.41 E-value=4 Score=42.03 Aligned_cols=190 Identities=13% Similarity=0.033 Sum_probs=99.0
Q ss_pred CCEEEEeccCCcEEEEECCCCccceEeecccc-c---CCccee--eEEeeeeeEEEEEecCCCceeeeeecCCC-CCcc-
Q 039692 48 NGVVYFPSWNGYLYAVNAFNGALIWEQNLSKL-T---GLSGTG--IVVNVTVAVVVAVSRSNGELVWSTQIDPR-PRSQ- 119 (417)
Q Consensus 48 ~g~v~v~~~~g~l~ald~~tG~~~W~~~~~~~-~---~~~p~~--~v~~~~v~~l~ald~~tG~~~W~~~~~~~-~~~~- 119 (417)
+..++.++.++.|...|..+|+.+-++.-... + ..+|.+ ++..+..+.+...|.. ++.......... ....
T Consensus 442 g~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~-~~~~~~~~~~~~~h~~~v 520 (694)
T 3dm0_A 442 GQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTL-GECKYTISEGGEGHRDWV 520 (694)
T ss_dssp SSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTT-SCEEEEECSSTTSCSSCE
T ss_pred CCEEEEEeCCCcEEEEECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECC-CCcceeeccCCCCCCCcE
Confidence 34677778899999999999988766543321 1 111211 1111223666777753 333333322111 1111
Q ss_pred --eeeceeEEcCeEEEEeCCccCccccCcccCCCceEEEEeCCCCceeceeeecCCCCCCCCCCCCccccCCCceeeccc
Q 039692 120 --ITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYSGAAVWGSSPAIDVIR 197 (417)
Q Consensus 120 --~~~sp~v~~~~v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~~gg~~~~~~pa~d~~~ 197 (417)
+..+|--....++.++. ++.|..+|.++++.+-.+.... +.+. ..++.++
T Consensus 521 ~~~~~~~~~~~~~l~s~s~--------------d~~v~vwd~~~~~~~~~~~~h~-----------~~v~--~v~~spd- 572 (694)
T 3dm0_A 521 SCVRFSPNTLQPTIVSASW--------------DKTVKVWNLSNCKLRSTLAGHT-----------GYVS--TVAVSPD- 572 (694)
T ss_dssp EEEEECSCSSSCEEEEEET--------------TSCEEEEETTTCCEEEEECCCS-----------SCEE--EEEECTT-
T ss_pred EEEEEeCCCCcceEEEEeC--------------CCeEEEEECCCCcEEEEEcCCC-----------CCEE--EEEEeCC-
Confidence 11122100123444444 6899999999888765443211 0010 1222221
Q ss_pred CcccCCCCCCCCCCCCcccCCCCCCeEEEEECCCCceEEEecCCCCcceeeeccCCCCCCCCCCCCCCCccCCCceEEEE
Q 039692 198 RQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTI 277 (417)
Q Consensus 198 ~~~~~~~~~~p~~~~~~v~~~~~~~~l~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~p~v~~~ 277 (417)
...+..++.++.+...|..+|+.+........ ..-...
T Consensus 573 --------------g~~l~sg~~Dg~i~iwd~~~~~~~~~~~~~~~----------------------------v~~~~~ 610 (694)
T 3dm0_A 573 --------------GSLCASGGKDGVVLLWDLAEGKKLYSLEANSV----------------------------IHALCF 610 (694)
T ss_dssp --------------SSEEEEEETTSBCEEEETTTTEEEECCBCSSC----------------------------EEEEEE
T ss_pred --------------CCEEEEEeCCCeEEEEECCCCceEEEecCCCc----------------------------EEEEEE
Confidence 12344556788999999999998876543211 000111
Q ss_pred ecCCeeeeEEEEEcccceEEEEECCCCcEEEEeec
Q 039692 278 STNGRFRDVVVAVQKSGFAWAFDRDSGDIIWFKLA 312 (417)
Q Consensus 278 ~~~G~~~~~v~~~~~~G~l~ald~~tG~~lW~~~~ 312 (417)
..+ +..+ +++.++.+...|.++++++-....
T Consensus 611 sp~---~~~l-~~~~~~~i~iwd~~~~~~~~~~~~ 641 (694)
T 3dm0_A 611 SPN---RYWL-CAATEHGIKIWDLESKSIVEDLKV 641 (694)
T ss_dssp CSS---SSEE-EEEETTEEEEEETTTTEEEEEECC
T ss_pred cCC---CcEE-EEEcCCCEEEEECCCCCChhhhcc
Confidence 122 2334 344556799999999988765543
No 183
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=93.34 E-value=2 Score=41.46 Aligned_cols=100 Identities=10% Similarity=0.138 Sum_probs=50.6
Q ss_pred CEEEEeccC---CcEEEEECCCCccceEeeccccc---CCccee--eEEee---eeeEEEEEecCCCceeeeeecCCCCC
Q 039692 49 GVVYFPSWN---GYLYAVNAFNGALIWEQNLSKLT---GLSGTG--IVVNV---TVAVVVAVSRSNGELVWSTQIDPRPR 117 (417)
Q Consensus 49 g~v~v~~~~---g~l~ald~~tG~~~W~~~~~~~~---~~~p~~--~v~~~---~v~~l~ald~~tG~~~W~~~~~~~~~ 117 (417)
..|+..+.+ ..|+.+|.++|+.+--....... ..+|.+ ++... -...|+.+|.++|+.. +......
T Consensus 191 ~~la~~s~~~~~~~i~~~d~~tg~~~~l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~~-~l~~~~~-- 267 (415)
T 2hqs_A 191 SKLAYVTFESGRSALVIQTLANGAVRQVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIR-QVTDGRS-- 267 (415)
T ss_dssp SEEEEEECTTSSCEEEEEETTTCCEEEEECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEE-ECCCCSS--
T ss_pred CEEEEEEecCCCcEEEEEECCCCcEEEeecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCEE-eCcCCCC--
Confidence 356666555 38999999999875322222211 112221 11011 1156999999888763 2221111
Q ss_pred cceeeceeEE-cCe-EEEEeCCccCccccCcccCCCceEEEEeCCCCce
Q 039692 118 SQITMSGSVY-MGA-FYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRI 164 (417)
Q Consensus 118 ~~~~~sp~v~-~~~-v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~~ 164 (417)
....+... ++. +++.+.... ...|+.+|.++|+.
T Consensus 268 --~~~~~~~spdg~~l~~~s~~~g-----------~~~i~~~d~~~~~~ 303 (415)
T 2hqs_A 268 --NNTEPTWFPDSQNLAFTSDQAG-----------RPQVYKVNINGGAP 303 (415)
T ss_dssp --CEEEEEECTTSSEEEEEECTTS-----------SCEEEEEETTSSCC
T ss_pred --cccceEECCCCCEEEEEECCCC-----------CcEEEEEECCCCCE
Confidence 12222221 444 555553200 23799999988764
No 184
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=93.25 E-value=7.1 Score=38.65 Aligned_cols=56 Identities=11% Similarity=0.278 Sum_probs=34.1
Q ss_pred eEEEEEcccceEEEEECCCCcEEEEeecCCCCCCCcceecc--cccCCeEEEEeccCCceeeee
Q 039692 285 DVVVAVQKSGFAWAFDRDSGDIIWFKLAGPGGREGGGVWGA--ATDGRRVYTNIVNNDRIIWST 346 (417)
Q Consensus 285 ~~v~~~~~~G~l~ald~~tG~~lW~~~~~~~~~~g~~~~~~--~~~~~~vy~~~~~~~~~~W~~ 346 (417)
+.|..++.|+.+...| .+|+.+.....-. .....+ ..++..|.....+..-.+|..
T Consensus 480 ~~las~~~d~~i~iw~-~~~~~~~~~~~h~-----~~v~~l~~s~dg~~l~s~~~dg~v~lwd~ 537 (577)
T 2ymu_A 480 QTIASASDDKTVKLWN-RNGQLLQTLTGHS-----SSVRGVAFSPDGQTIASASDDKTVKLWNR 537 (577)
T ss_dssp CEEEEEETTSEEEEEE-TTSCEEEEEECCS-----SCEEEEEECTTSSCEEEEETTSEEEEECT
T ss_pred CEEEEEeCCCEEEEEc-CCCCEEEEEeCCC-----CCEEEEEEcCCCCEEEEEECcCEEEEEeC
Confidence 5777788899999999 5788887765311 111122 234555555555544567763
No 185
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=93.04 E-value=3 Score=40.32 Aligned_cols=56 Identities=13% Similarity=0.011 Sum_probs=33.3
Q ss_pred eEEEEEcccceEEEEECCCCcEEEEeecCCCCCCCccee-ccccc--CCeEEEEeccCC
Q 039692 285 DVVVAVQKSGFAWAFDRDSGDIIWFKLAGPGGREGGGVW-GAATD--GRRVYTNIVNND 340 (417)
Q Consensus 285 ~~v~~~~~~G~l~ald~~tG~~lW~~~~~~~~~~g~~~~-~~~~~--~~~vy~~~~~~~ 340 (417)
+.||+...++.++.+|.++++.......+.....+..-. .++++ ++.+|+.+...+
T Consensus 231 g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~~ 289 (409)
T 3hrp_A 231 EWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNLS 289 (409)
T ss_dssp SEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETTTT
T ss_pred CeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeCCCC
Confidence 467778888899999999887654422211111111101 34443 688999886554
No 186
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=93.03 E-value=5 Score=36.32 Aligned_cols=63 Identities=14% Similarity=0.133 Sum_probs=31.5
Q ss_pred eEEEEE-cccceEEEEECC--CCcEEEEeec--CCCCCCCc-c--eecccccCCeEEEEeccCC-ceeeeec
Q 039692 285 DVVVAV-QKSGFAWAFDRD--SGDIIWFKLA--GPGGREGG-G--VWGAATDGRRVYTNIVNND-RIIWSTA 347 (417)
Q Consensus 285 ~~v~~~-~~~G~l~ald~~--tG~~lW~~~~--~~~~~~g~-~--~~~~~~~~~~vy~~~~~~~-~~~W~~~ 347 (417)
+.+|+. ..++.+..+|.+ +|+....... .+....+. . ......+++.+|+....++ -.+|..+
T Consensus 190 ~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~ 261 (343)
T 1ri6_A 190 QYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVS 261 (343)
T ss_dssp SEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEEC
T ss_pred CEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecCCCEEEEEEEc
Confidence 345554 478899999984 5665332222 11111111 1 1122335667887764433 4566655
No 187
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=92.98 E-value=3.1 Score=44.74 Aligned_cols=209 Identities=10% Similarity=0.048 Sum_probs=107.7
Q ss_pred CCEEEEeccCCcEEEEECCCCccceEeecccccC---Cccee-eEEeeeeeEEEEEecCCCceeeeeecCCCCCcceeec
Q 039692 48 NGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTG---LSGTG-IVVNVTVAVVVAVSRSNGELVWSTQIDPRPRSQITMS 123 (417)
Q Consensus 48 ~g~v~v~~~~g~l~ald~~tG~~~W~~~~~~~~~---~~p~~-~v~~~~v~~l~ald~~tG~~~W~~~~~~~~~~~~~~s 123 (417)
+..+..++.+|.|+.+|..+++.+-.......+. .+|.. ++.....+.+...|..+|+.+-.+..... ...+..+
T Consensus 29 g~~lAsgs~Dg~I~lw~~~~~~~~~~~~~~~~V~~l~fspg~~L~S~s~D~~v~lWd~~~~~~~~~~~~~~~-V~~v~~s 107 (902)
T 2oaj_A 29 QNLLAIATVTGEVHIYGQQQVEVVIKLEDRSAIKEMRFVKGIYLVVINAKDTVYVLSLYSQKVLTTVFVPGK-ITSIDTD 107 (902)
T ss_dssp TTEEEEEETTSEEEEECSTTCEEEEECSSCCCEEEEEEETTTEEEEEETTCEEEEEETTTCSEEEEEECSSC-EEEEECC
T ss_pred CCEEEEEeCCCEEEEEeCCCcEEEEEcCCCCCEEEEEEcCCCEEEEEECcCeEEEEECCCCcEEEEEcCCCC-EEEEEEC
Confidence 3467778889999999988877654433221111 11200 11112238899999999988877653211 1112223
Q ss_pred eeEEcCeEEEEeCCccCccccCcccCCCceEEEEeCCCCceeceeeecC-----CCCCCCCCCCCccccCCCceeecccC
Q 039692 124 GSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYMLP-----DNGGKRGGYSGAAVWGSSPAIDVIRR 198 (417)
Q Consensus 124 p~v~~~~v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~~~W~~~~~~-----~~~~~~~~~~gg~~~~~~pa~d~~~~ 198 (417)
| .+..++++.. ++.|..+|.++++.. .+.... .... + .. +.+ ...++.+...
T Consensus 108 p--~g~~l~sgs~--------------dg~V~lwd~~~~~~~-~~~i~~~~~~~~~~~--~-h~-~~V--~sl~~sp~~~ 164 (902)
T 2oaj_A 108 A--SLDWMLIGLQ--------------NGSMIVYDIDRDQLS-SFKLDNLQKSSFFPA--A-RL-SPI--VSIQWNPRDI 164 (902)
T ss_dssp T--TCSEEEEEET--------------TSCEEEEETTTTEEE-EEEECCHHHHHTCSS--S-CC-CCC--CEEEEETTEE
T ss_pred C--CCCEEEEEcC--------------CCcEEEEECCCCccc-cceeccccccccccc--c-CC-CCe--EEEEEccCCC
Confidence 3 2455777765 689999999988764 111100 0000 0 00 011 1123332110
Q ss_pred cccCCCCCCCCCCCCcccCCCCCCeEEEEECCCCceEEEecCCCCcceeeeccCCCCCCCCCCCCCCCccCCCceEEEE-
Q 039692 199 QKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTI- 277 (417)
Q Consensus 199 ~~~~~~~~~p~~~~~~v~~~~~~~~l~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~p~v~~~- 277 (417)
..+..+..++.+ ..|.++++.+-.+.......- + .........-.....+..+
T Consensus 165 --------------~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~---------~--~~~~~~~~~~~h~~~V~~v~ 218 (902)
T 2oaj_A 165 --------------GTVLISYEYVTL-TYSLVENEIKQSFIYELPPFA---------P--GGDFSEKTNEKRTPKVIQSL 218 (902)
T ss_dssp --------------EEEEEECSSCEE-EEETTTTEEEEEECCCBCTTC---------C--CSTTCCCTTSCBCCCEEEEE
T ss_pred --------------CEEEEEeCCCcE-EEECCCCceEEEEecccCCcC---------C--CcccccccccccCCCeEEEE
Confidence 123344566777 888888887765543200000 0 0000000000001222223
Q ss_pred -ecCCeeeeEEEEEcccceEEEEECCCCcEEEE
Q 039692 278 -STNGRFRDVVVAVQKSGFAWAFDRDSGDIIWF 309 (417)
Q Consensus 278 -~~~G~~~~~v~~~~~~G~l~ald~~tG~~lW~ 309 (417)
..+| ..|..++.||.+...|.++|+.+-.
T Consensus 219 fspdg---~~lasgs~Dg~i~lWd~~~g~~~~~ 248 (902)
T 2oaj_A 219 YHPNS---LHIITIHEDNSLVFWDANSGHMIMA 248 (902)
T ss_dssp ECTTS---SEEEEEETTCCEEEEETTTCCEEEE
T ss_pred EcCCC---CEEEEEECCCeEEEEECCCCcEEEE
Confidence 3444 5788889999999999999988754
No 188
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=92.95 E-value=5.9 Score=37.18 Aligned_cols=60 Identities=15% Similarity=-0.004 Sum_probs=39.5
Q ss_pred ccCCCCCCeEEEEECCCCceEEEecCCCCcceeeeccCCCCCCCCCCCCCCCccCCCceEEEEecCCeeeeEEEEEcccc
Q 039692 215 ISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSG 294 (417)
Q Consensus 215 v~~~~~~~~l~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~p~v~~~~~~G~~~~~v~~~~~~G 294 (417)
+..++.++.+..+|.++|+.+-++...... ...-+.+..+| +.|+.++.|+
T Consensus 284 lasgs~D~~V~iwd~~~~~~~~~~~~gH~~--------------------------~V~~v~fSpdg---~~laS~S~D~ 334 (365)
T 4h5i_A 284 AVLASNDNSIALVKLKDLSMSKIFKQAHSF--------------------------AITEVTISPDS---TYVASVSAAN 334 (365)
T ss_dssp EEEEETTSCEEEEETTTTEEEEEETTSSSS--------------------------CEEEEEECTTS---CEEEEEETTS
T ss_pred eEEEcCCCEEEEEECCCCcEEEEecCcccC--------------------------CEEEEEECCCC---CEEEEEeCCC
Confidence 445667889999999999988766433211 11112233454 5778888999
Q ss_pred eEEEEECCC
Q 039692 295 FAWAFDRDS 303 (417)
Q Consensus 295 ~l~ald~~t 303 (417)
.+...|...
T Consensus 335 tvrvw~ip~ 343 (365)
T 4h5i_A 335 TIHIIKLPL 343 (365)
T ss_dssp EEEEEECCT
T ss_pred eEEEEEcCC
Confidence 999888643
No 189
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=92.90 E-value=0.31 Score=45.85 Aligned_cols=58 Identities=3% Similarity=-0.116 Sum_probs=33.2
Q ss_pred eEEEEEcccceEEEEECCCCcE----EEEeecCCCCCCCcceecccc-cCCeEEEEeccCCceeeeec
Q 039692 285 DVVVAVQKSGFAWAFDRDSGDI----IWFKLAGPGGREGGGVWGAAT-DGRRVYTNIVNNDRIIWSTA 347 (417)
Q Consensus 285 ~~v~~~~~~G~l~ald~~tG~~----lW~~~~~~~~~~g~~~~~~~~-~~~~vy~~~~~~~~~~W~~~ 347 (417)
+.|+.++.||.++..|..+++. +-..... . .....++. .++.+++...+++..+|...
T Consensus 218 ~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~----~-~~v~~~~~s~~~~~l~~~~~~~~~~~~~~ 280 (377)
T 3dwl_C 218 NALAYAGHDSSVTIAYPSAPEQPPRALITVKLS----Q-LPLRSLLWANESAIVAAGYNYSPILLQGN 280 (377)
T ss_dssp SCEEEEETTTEEC-CEECSTTSCEEECCCEECS----S-SCEEEEEEEETTEEEEEESSSSEEEECCC
T ss_pred CEEEEEeCCCcEEEEECCCCCCcceeeEeecCC----C-CceEEEEEcCCCCEEEEEcCCcEEEEEeC
Confidence 4677788999999999999876 3332221 1 11122222 23455555566666677654
No 190
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=92.81 E-value=7.4 Score=39.39 Aligned_cols=218 Identities=10% Similarity=-0.034 Sum_probs=112.5
Q ss_pred EEEEeccCCcEEEEECCCCccceEeeccc-cc---CCccee--eEEeeeeeEEEEEecCCCceeeeeec------CCC-C
Q 039692 50 VVYFPSWNGYLYAVNAFNGALIWEQNLSK-LT---GLSGTG--IVVNVTVAVVVAVSRSNGELVWSTQI------DPR-P 116 (417)
Q Consensus 50 ~v~v~~~~g~l~ald~~tG~~~W~~~~~~-~~---~~~p~~--~v~~~~v~~l~ald~~tG~~~W~~~~------~~~-~ 116 (417)
.++.++.++.+..+|.++++.+-.+.-.. .+ ..+|.+ ++..+..+.+...|..+|+.+-.... ... .
T Consensus 162 ~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~ 241 (611)
T 1nr0_A 162 RIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGS 241 (611)
T ss_dssp EEEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSC
T ss_pred EEEEEeCCCeEEEEECCCCeEeeeeccccCceEEEEECCCCCEEEEEECCCcEEEEECCCCcEeeeeccccccccccCCC
Confidence 46677788899999988876654433221 11 112211 12222348888889888887655431 111 0
Q ss_pred CcceeeceeEEcCe-EEEEeCCccCccccCcccCCCceEEEEeCCCCceeceeeecCCCCCCCCCCCCccccCCCceeec
Q 039692 117 RSQITMSGSVYMGA-FYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYSGAAVWGSSPAIDV 195 (417)
Q Consensus 117 ~~~~~~sp~v~~~~-v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~~gg~~~~~~pa~d~ 195 (417)
...+..+| ++. ++.+.. ++.|...|.++|+.+-++....... ...+ ....+
T Consensus 242 V~~v~~sp---dg~~l~s~s~--------------D~~v~lWd~~~~~~~~~~~~~~~~~--------~~~~--~~~~~- 293 (611)
T 1nr0_A 242 VFGLTWSP---DGTKIASASA--------------DKTIKIWNVATLKVEKTIPVGTRIE--------DQQL--GIIWT- 293 (611)
T ss_dssp EEEEEECT---TSSEEEEEET--------------TSEEEEEETTTTEEEEEEECCSSGG--------GCEE--EEEEC-
T ss_pred EEEEEECC---CCCEEEEEeC--------------CCeEEEEeCCCCceeeeecCCCCcc--------ceeE--EEEEc-
Confidence 01122233 444 444443 6899999999998876655421000 0000 00111
Q ss_pred ccCcccCCCCCCCCCCCCcccCCCCCCeEEEEECCCCceEEEecCCCCcceeeeccCCCCCCCCCCCCCCCccCCCceE-
Q 039692 196 IRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPML- 274 (417)
Q Consensus 196 ~~~~~~~~~~~~p~~~~~~v~~~~~~~~l~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~p~v- 274 (417)
...+.....++.+..+|.++++..-.... +. .++.
T Consensus 294 ----------------~~~l~s~s~d~~i~~~~~~~~~~~~~~~g--h~--------------------------~~v~~ 329 (611)
T 1nr0_A 294 ----------------KQALVSISANGFINFVNPELGSIDQVRYG--HN--------------------------KAITA 329 (611)
T ss_dssp ----------------SSCEEEEETTCCEEEEETTTTEEEEEECC--CS--------------------------SCEEE
T ss_pred ----------------CCEEEEEeCCCcEEEEeCCCCCcceEEcC--CC--------------------------CCEEE
Confidence 11233445567788888888775432221 11 1111
Q ss_pred EEEecCCeeeeEEEEEcccceEEEEECCCCcEEEEeecCCCCCCCcceecccc-cCCeEEEEeccCCceeeee
Q 039692 275 LTISTNGRFRDVVVAVQKSGFAWAFDRDSGDIIWFKLAGPGGREGGGVWGAAT-DGRRVYTNIVNNDRIIWST 346 (417)
Q Consensus 275 ~~~~~~G~~~~~v~~~~~~G~l~ald~~tG~~lW~~~~~~~~~~g~~~~~~~~-~~~~vy~~~~~~~~~~W~~ 346 (417)
.....+ ++.|+.++.|+.+...|..+|+..-....+. . .....++. .++.++....+..-.+|..
T Consensus 330 l~~spd---g~~l~s~s~D~~v~~Wd~~~~~~~~~~~~~h---~-~~v~~~~~s~~~~l~s~s~d~~v~~w~~ 395 (611)
T 1nr0_A 330 LSSSAD---GKTLFSADAEGHINSWDISTGISNRVFPDVH---A-TMITGIKTTSKGDLFTVSWDDHLKVVPA 395 (611)
T ss_dssp EEECTT---SSEEEEEETTSCEEEEETTTCCEEECSSCSC---S-SCEEEEEECTTSCEEEEETTTEEEEECS
T ss_pred EEEeCC---CCEEEEEeCCCcEEEEECCCCceeeecccCC---c-ceEEEEEECCCCcEEEEEcCCceEEeec
Confidence 112234 3578888999999999999998754321111 1 11112221 3445555555555556654
No 191
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=92.66 E-value=5.9 Score=36.15 Aligned_cols=118 Identities=16% Similarity=0.177 Sum_probs=64.2
Q ss_pred cceeeeEEEeCCceeeCcEEE-CCEEEEec-cCCcEEEEECCCCccceEeecccccCCcceeeEE--ee--ee-------
Q 039692 27 NLRLRWSFYAGKDISATPAVA-NGVVYFPS-WNGYLYAVNAFNGALIWEQNLSKLTGLSGTGIVV--NV--TV------- 93 (417)
Q Consensus 27 ~~~~~W~~~~~~~~~~~p~~~-~g~v~v~~-~~g~l~ald~~tG~~~W~~~~~~~~~~~p~~~v~--~~--~v------- 93 (417)
..++.=++..+. ....+++. ++.||+++ ..++|+.||+++ +..-....+. .|.++.. ++ ++
T Consensus 21 ~~~~~~~~p~~~-~pegia~~~~g~lyv~d~~~~~I~~~d~~g-~~~~~~~~~~----~p~gia~~~dG~l~vad~~~~~ 94 (306)
T 2p4o_A 21 PAKIITSFPVNT-FLENLASAPDGTIFVTNHEVGEIVSITPDG-NQQIHATVEG----KVSGLAFTSNGDLVATGWNADS 94 (306)
T ss_dssp CEEEEEEECTTC-CEEEEEECTTSCEEEEETTTTEEEEECTTC-CEEEEEECSS----EEEEEEECTTSCEEEEEECTTS
T ss_pred CceEeEeCCCCC-CcceEEECCCCCEEEEeCCCCeEEEECCCC-ceEEEEeCCC----CceeEEEcCCCcEEEEeccCCc
Confidence 344444444332 33445554 67899887 578999999864 4433333322 2333321 12 11
Q ss_pred eEEEEEecCCCceeeeeecCCCCCcceeeceeE-EcCeEEEEeCCccCccccCcccCCCceEEEEeCCCCc-eec
Q 039692 94 AVVVAVSRSNGELVWSTQIDPRPRSQITMSGSV-YMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGR-IIW 166 (417)
Q Consensus 94 ~~l~ald~~tG~~~W~~~~~~~~~~~~~~sp~v-~~~~v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~-~~W 166 (417)
..|+.+|.++|++.-....... .....+++ .++.+|+.... .+.|+.+|..+|+ .+|
T Consensus 95 ~~v~~~d~~~g~~~~~~~~~~~---~~~~g~~~~~~~~~~v~d~~-------------~g~i~~~d~~~~~~~v~ 153 (306)
T 2p4o_A 95 IPVVSLVKSDGTVETLLTLPDA---IFLNGITPLSDTQYLTADSY-------------RGAIWLIDVVQPSGSIW 153 (306)
T ss_dssp CEEEEEECTTSCEEEEEECTTC---SCEEEEEESSSSEEEEEETT-------------TTEEEEEETTTTEEEEE
T ss_pred ceEEEEcCCCCeEEEEEeCCCc---cccCcccccCCCcEEEEECC-------------CCeEEEEeCCCCcEeEE
Confidence 2488888888887544443211 11122222 24567776542 5799999998764 344
No 192
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=92.60 E-value=6 Score=36.15 Aligned_cols=224 Identities=11% Similarity=0.019 Sum_probs=110.7
Q ss_pred CEEEEeccCCcEEEEECCCCccceEeecccc-cC---Cccee--eEEeeeeeEEEEEecCCCceeeeeecCCCCCcceee
Q 039692 49 GVVYFPSWNGYLYAVNAFNGALIWEQNLSKL-TG---LSGTG--IVVNVTVAVVVAVSRSNGELVWSTQIDPRPRSQITM 122 (417)
Q Consensus 49 g~v~v~~~~g~l~ald~~tG~~~W~~~~~~~-~~---~~p~~--~v~~~~v~~l~ald~~tG~~~W~~~~~~~~~~~~~~ 122 (417)
..++.++.++.|...|.++|+.+-++.-... +. .+|.+ ++.....+.+...|.+ ++.+-+..........+..
T Consensus 78 ~~l~s~s~D~~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~-~~~~~~~~~h~~~v~~~~~ 156 (319)
T 3frx_A 78 AYALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIK-GQCLATLLGHNDWVSQVRV 156 (319)
T ss_dssp SEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETT-SCEEEEECCCSSCEEEEEE
T ss_pred CEEEEEeCCCEEEEEECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECC-CCeEEEEeccCCcEEEEEE
Confidence 4677778899999999999987665543321 10 11110 1111122666666654 3333332211111111222
Q ss_pred ceeE---EcC-eEEEEeCCccCccccCcccCCCceEEEEeCCCCceeceeeecCCCCCCCCCCCCccccCCCceeecccC
Q 039692 123 SGSV---YMG-AFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYSGAAVWGSSPAIDVIRR 198 (417)
Q Consensus 123 sp~v---~~~-~v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~~gg~~~~~~pa~d~~~~ 198 (417)
.|.. .++ .++.+.. ++.|...|.++++..-.+.... ..+. ..++.++
T Consensus 157 ~~~~~~~~~~~~l~s~~~--------------d~~i~~wd~~~~~~~~~~~~h~-----------~~v~--~~~~sp~-- 207 (319)
T 3frx_A 157 VPNEKADDDSVTIISAGN--------------DKMVKAWNLNQFQIEADFIGHN-----------SNIN--TLTASPD-- 207 (319)
T ss_dssp CCC------CCEEEEEET--------------TSCEEEEETTTTEEEEEECCCC-----------SCEE--EEEECTT--
T ss_pred ccCCCCCCCccEEEEEeC--------------CCEEEEEECCcchhheeecCCC-----------CcEE--EEEEcCC--
Confidence 2211 122 3444443 6899999998887664433210 0010 1122221
Q ss_pred cccCCCCCCCCCCCCcccCCCCCCeEEEEECCCCceEEEecCCCCcceeeeccCCCCCCCCCCCCCCCccCCCceEEEEe
Q 039692 199 QKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTIS 278 (417)
Q Consensus 199 ~~~~~~~~~p~~~~~~v~~~~~~~~l~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~p~v~~~~ 278 (417)
...+..+..++.+...|.++++.+........ . .-....
T Consensus 208 -------------g~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~-v---------------------------~~~~~s 246 (319)
T 3frx_A 208 -------------GTLIASAGKDGEIMLWNLAAKKAMYTLSAQDE-V---------------------------FSLAFS 246 (319)
T ss_dssp -------------SSEEEEEETTCEEEEEETTTTEEEEEEECCSC-E---------------------------EEEEEC
T ss_pred -------------CCEEEEEeCCCeEEEEECCCCcEEEEecCCCc-E---------------------------EEEEEc
Confidence 12344556788999999999998887764321 0 011122
Q ss_pred cCCeeeeEEEEEcccceEEEEECCCCcEEEEeecCCCCCC---Ccceec--ccccCCeEEEEeccCCceeeeec
Q 039692 279 TNGRFRDVVVAVQKSGFAWAFDRDSGDIIWFKLAGPGGRE---GGGVWG--AATDGRRVYTNIVNNDRIIWSTA 347 (417)
Q Consensus 279 ~~G~~~~~v~~~~~~G~l~ald~~tG~~lW~~~~~~~~~~---g~~~~~--~~~~~~~vy~~~~~~~~~~W~~~ 347 (417)
.+| ..+..+.. ..+..++.+++..+........... ...... ...++..++....++.-.+|...
T Consensus 247 p~~---~~la~~~~-~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~sg~~Dg~i~vWd~~ 316 (319)
T 3frx_A 247 PNR---YWLAAATA-TGIKVFSLDPQYLVDDLRPEFAGYSKAAEPHAVSLAWSADGQTLFAGYTDNVIRVWQVM 316 (319)
T ss_dssp SSS---SEEEEEET-TEEEEEEETTEEEEEEECCCCTTCCGGGCCCEEEEEECTTSSEEEEEETTSCEEEEEEE
T ss_pred CCC---CEEEEEcC-CCcEEEEeCcCeeeeccCccccccccCcCcceeEEEECCCCCEEEEeecCceEEEEEEe
Confidence 232 34444443 4477777777666655442110000 001111 22356666666666666778764
No 193
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=92.36 E-value=2.4 Score=40.00 Aligned_cols=65 Identities=9% Similarity=-0.040 Sum_probs=42.7
Q ss_pred EecCCeeeeEEEEEcccceEEEEECCCCcEEEEeecCCCCCCCcceeccc--ccCCeEEEEeccCCceeeeecC
Q 039692 277 ISTNGRFRDVVVAVQKSGFAWAFDRDSGDIIWFKLAGPGGREGGGVWGAA--TDGRRVYTNIVNNDRIIWSTAD 348 (417)
Q Consensus 277 ~~~~G~~~~~v~~~~~~G~l~ald~~tG~~lW~~~~~~~~~~g~~~~~~~--~~~~~vy~~~~~~~~~~W~~~~ 348 (417)
+..+| ++|..++.|+.+...|.++|+++-+...+.. .....++ .++..|.....+..-.+|+.+.
T Consensus 277 ~Spdg---~~lasgs~D~~V~iwd~~~~~~~~~~~~gH~----~~V~~v~fSpdg~~laS~S~D~tvrvw~ip~ 343 (365)
T 4h5i_A 277 VDMKG---ELAVLASNDNSIALVKLKDLSMSKIFKQAHS----FAITEVTISPDSTYVASVSAANTIHIIKLPL 343 (365)
T ss_dssp ECTTS---CEEEEEETTSCEEEEETTTTEEEEEETTSSS----SCEEEEEECTTSCEEEEEETTSEEEEEECCT
T ss_pred ECCCC---CceEEEcCCCEEEEEECCCCcEEEEecCccc----CCEEEEEECCCCCEEEEEeCCCeEEEEEcCC
Confidence 34554 5788889999999999999999877643211 1122233 3555555556666678888754
No 194
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=92.05 E-value=4.1 Score=37.06 Aligned_cols=46 Identities=9% Similarity=0.018 Sum_probs=28.0
Q ss_pred EEEEEcccceEEEEECCCCcEEEEeecCCCCCCCcceecccccCCeEEEEec
Q 039692 286 VVVAVQKSGFAWAFDRDSGDIIWFKLAGPGGREGGGVWGAATDGRRVYTNIV 337 (417)
Q Consensus 286 ~v~~~~~~G~l~ald~~tG~~lW~~~~~~~~~~g~~~~~~~~~~~~vy~~~~ 337 (417)
.||+++.+ .|+++|+ +|+.+-+...+. +........+++.+|+...
T Consensus 251 ~lwv~~~~-gv~~~~~-~g~~~~~~~~~~----~~~~~~f~~d~~~L~it~~ 296 (305)
T 3dr2_A 251 WLWSSSGT-GVCVFDS-DGQLLGHIPTPG----TASNCTFDQAQQRLFITGG 296 (305)
T ss_dssp CEEECCSS-EEEEECT-TSCEEEEEECSS----CCCEEEECTTSCEEEEEET
T ss_pred CEEEecCC-cEEEECC-CCCEEEEEECCC----ceeEEEEeCCCCEEEEEcC
Confidence 37877755 5999998 688887776531 1111111235667887764
No 195
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=92.04 E-value=6.7 Score=35.42 Aligned_cols=98 Identities=11% Similarity=0.091 Sum_probs=53.7
Q ss_pred CcEEEEECCCCccceEeecccc--cCCcceeeEEee--e----------eeEEEEEecCCCc-eeeeeecCCCCCcceee
Q 039692 58 GYLYAVNAFNGALIWEQNLSKL--TGLSGTGIVVNV--T----------VAVVVAVSRSNGE-LVWSTQIDPRPRSQITM 122 (417)
Q Consensus 58 g~l~ald~~tG~~~W~~~~~~~--~~~~p~~~v~~~--~----------v~~l~ald~~tG~-~~W~~~~~~~~~~~~~~ 122 (417)
..++++|+.++ .|+.-..-+ .....+ ++.++ + ...++.+|..+.+ ..|+.-.+ .+......
T Consensus 31 ~~~~~~d~~~~--~W~~~~~~p~~r~~~~~-~~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~-~p~~r~~~ 106 (301)
T 2vpj_A 31 DVVEKYDPKTQ--EWSFLPSITRKRRYVAS-VSLHDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAP-MNVRRGLA 106 (301)
T ss_dssp CCEEEEETTTT--EEEECCCCSSCCBSCEE-EEETTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECC-CSSCCBSC
T ss_pred eEEEEEcCCCC--eEEeCCCCChhhccccE-EEECCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCC-CCCCccce
Confidence 47999999766 487643211 111111 11111 1 1579999998876 45876532 11112223
Q ss_pred ceeEEcCeEEEEeCCccCccccCcccCCCceEEEEeCCCCceeceee
Q 039692 123 SGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTY 169 (417)
Q Consensus 123 sp~v~~~~v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~~~W~~~ 169 (417)
+-++.++.+|+........ ....++.+|+.+.+ |+.-
T Consensus 107 ~~~~~~~~lyv~GG~~~~~--------~~~~~~~~d~~~~~--W~~~ 143 (301)
T 2vpj_A 107 GATTLGDMIYVSGGFDGSR--------RHTSMERYDPNIDQ--WSML 143 (301)
T ss_dssp EEEEETTEEEEECCBCSSC--------BCCEEEEEETTTTE--EEEE
T ss_pred eEEEECCEEEEEcccCCCc--------ccceEEEEcCCCCe--EEEC
Confidence 3345688888765421110 13579999998654 7643
No 196
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=92.01 E-value=8.9 Score=36.74 Aligned_cols=102 Identities=14% Similarity=0.046 Sum_probs=50.1
Q ss_pred CCEEEEeccC------CcEEEEECCCCccceEeeccccc---CCccee--eEEeeee---eEEEEEecCCCceeeeeecC
Q 039692 48 NGVVYFPSWN------GYLYAVNAFNGALIWEQNLSKLT---GLSGTG--IVVNVTV---AVVVAVSRSNGELVWSTQID 113 (417)
Q Consensus 48 ~g~v~v~~~~------g~l~ald~~tG~~~W~~~~~~~~---~~~p~~--~v~~~~v---~~l~ald~~tG~~~W~~~~~ 113 (417)
+.++.+.+.+ +.|+.+|.+++++.--......+ ..+|.+ ++..... ..|+.+|.++|+..-.....
T Consensus 143 ~~~l~~~s~~~~~~~~~~i~i~d~~g~~~~~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~~l~~~~ 222 (415)
T 2hqs_A 143 RTRIAYVVQTNGGQFPYELRVSDYDGYNQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVASFP 222 (415)
T ss_dssp TCEEEEEEECSSSSCCEEEEEEETTSCSCEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEEEECCS
T ss_pred CCEEEEEEecCCCCccceEEEEcCCCCCCEEEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEEEeecCC
Confidence 5565555443 68999998654432211111111 122321 1111111 48999999999876322222
Q ss_pred CCCCcceeeceeEEcCe-EEEEeCCccCccccCcccCCCceEEEEeCCCCce
Q 039692 114 PRPRSQITMSGSVYMGA-FYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRI 164 (417)
Q Consensus 114 ~~~~~~~~~sp~v~~~~-v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~~ 164 (417)
. ....+..+| ++. +++..... .+..|+.+|.++|+.
T Consensus 223 ~-~~~~~~~sp---dg~~la~~~~~~-----------g~~~i~~~d~~~~~~ 259 (415)
T 2hqs_A 223 R-HNGAPAFSP---DGSKLAFALSKT-----------GSLNLYVMDLASGQI 259 (415)
T ss_dssp S-CEEEEEECT---TSSEEEEEECTT-----------SSCEEEEEETTTCCE
T ss_pred C-cccCEEEcC---CCCEEEEEEecC-----------CCceEEEEECCCCCE
Confidence 1 111122233 444 55343320 024699999998876
No 197
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=91.85 E-value=8.1 Score=35.94 Aligned_cols=164 Identities=11% Similarity=0.030 Sum_probs=84.9
Q ss_pred CCEEEEeccCCcEEEEECCCCccceEeecccc-c---CCccee---eEEeeeeeEEEEEecCC----CceeeeeecCCCC
Q 039692 48 NGVVYFPSWNGYLYAVNAFNGALIWEQNLSKL-T---GLSGTG---IVVNVTVAVVVAVSRSN----GELVWSTQIDPRP 116 (417)
Q Consensus 48 ~g~v~v~~~~g~l~ald~~tG~~~W~~~~~~~-~---~~~p~~---~v~~~~v~~l~ald~~t----G~~~W~~~~~~~~ 116 (417)
+..++.++.++.|+.+|. +++.+..+..... + ..+|.+ ++.....+.+..+|..+ ++.+-.......
T Consensus 175 ~~~l~~~~~d~~i~i~d~-~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~- 252 (383)
T 3ei3_B 175 RQMLATGDSTGRLLLLGL-DGHEIFKEKLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEMPHEKP- 252 (383)
T ss_dssp TTEEEEEETTSEEEEEET-TSCEEEEEECSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEEECSSC-
T ss_pred CCEEEEECCCCCEEEEEC-CCCEEEEeccCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEecCCCc-
Confidence 456777788999999998 6887777764321 1 111211 11122237888888877 555544431111
Q ss_pred CcceeeceeEEcCeEEEEeCCccCccccCcccCCCceEEEEeCCCCceeceeeecCCCCCCCCCCCCccccCCCceeecc
Q 039692 117 RSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYSGAAVWGSSPAIDVI 196 (417)
Q Consensus 117 ~~~~~~sp~v~~~~v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~~gg~~~~~~pa~d~~ 196 (417)
...+..+|. .+..++++.. ++.|..+|.++++..-++...+...... . ..+ ...+.+.
T Consensus 253 v~~~~~s~~-~~~~l~~~~~--------------d~~i~iwd~~~~~~~~~~~~~~~~~~~~---~-~~~---~~~~~p~ 310 (383)
T 3ei3_B 253 VNAAYFNPT-DSTKLLTTDQ--------------RNEIRVYSSYDWSKPDQIIIHPHRQFQH---L-TPI---KATWHPM 310 (383)
T ss_dssp EEEEEECTT-TSCEEEEEES--------------SSEEEEEETTBTTSCSEEEECCBCCCTT---S-CCC---CCEECSS
T ss_pred eEEEEEcCC-CCCEEEEEcC--------------CCcEEEEECCCCcccccccccccccccc---c-cce---EEeccCC
Confidence 011111110 1234555544 6899999999998876665422110000 0 000 0011111
Q ss_pred cCcccCCCCCCCCCCCCcccCCCCCCeEEEEECCCCceEEEecCC
Q 039692 197 RRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLG 241 (417)
Q Consensus 197 ~~~~~~~~~~~p~~~~~~v~~~~~~~~l~ald~~tG~~~W~~~~~ 241 (417)
..... .... .++.. .+..++.+..+|.++|+.+-.....
T Consensus 311 ~~~~~--~~~s---~dg~~-s~s~d~~i~iwd~~~~~~~~~l~~~ 349 (383)
T 3ei3_B 311 YDLIV--AGRY---PDDQL-LLNDKRTIDIYDANSGGLVHQLRDP 349 (383)
T ss_dssp SSEEE--EECB---CCTTT-CTTCCCCEEEEETTTCCEEEEECBT
T ss_pred CCceE--EEec---CCccc-ccCCCCeEEEEecCCCceeeeecCC
Confidence 10000 0000 12223 5567899999999999998877643
No 198
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=91.75 E-value=6.3 Score=37.82 Aligned_cols=103 Identities=12% Similarity=0.001 Sum_probs=51.6
Q ss_pred CEEEEeccCCcEEEEECCCCccceEeeccc-cc---CCccee--eE-EeeeeeEEEEEecCCCceeeeeecCCCCCcc--
Q 039692 49 GVVYFPSWNGYLYAVNAFNGALIWEQNLSK-LT---GLSGTG--IV-VNVTVAVVVAVSRSNGELVWSTQIDPRPRSQ-- 119 (417)
Q Consensus 49 g~v~v~~~~g~l~ald~~tG~~~W~~~~~~-~~---~~~p~~--~v-~~~~v~~l~ald~~tG~~~W~~~~~~~~~~~-- 119 (417)
..|+.++.+|.|+.+|.+ |+.+.++.... .+ ..+|.+ ++ ..+..+.+..+|..+++..-...........
T Consensus 222 ~~l~~g~~dg~i~~wd~~-~~~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~ 300 (435)
T 4e54_B 222 RMVVTGDNVGNVILLNMD-GKELWNLRMHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVN 300 (435)
T ss_dssp TEEEEECSSSBEEEEESS-SCBCCCSBCCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCSSSCCSBCCBCSSCEE
T ss_pred CEEEEEeCCCcEeeeccC-cceeEEEecccceEEeeeecCCCceEEEEecCcceeeEEecccccccceEEEeeecccccc
Confidence 467777889999999984 66666554322 11 111110 01 1112255555665554432222111000011
Q ss_pred -eeeceeEEcC-eEEEEeCCccCccccCcccCCCceEEEEeCCCCceeceee
Q 039692 120 -ITMSGSVYMG-AFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTY 169 (417)
Q Consensus 120 -~~~sp~v~~~-~v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~~~W~~~ 169 (417)
+..+| ++ .++.+.. ++.|..+|..+|+..-...
T Consensus 301 ~~~~sp---dg~~l~s~~~--------------D~~i~iwd~~~~~~~~~~~ 335 (435)
T 4e54_B 301 AACFSP---DGARLLTTDQ--------------KSEIRVYSASQWDCPLGLI 335 (435)
T ss_dssp ECCBCT---TSSEEEEEES--------------SSCEEEEESSSSSSEEEEC
T ss_pred ceeECC---CCCeeEEEcC--------------CCEEEEEECCCCccceEEe
Confidence 11223 34 4555544 6899999999888765543
No 199
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=91.73 E-value=7.6 Score=35.37 Aligned_cols=60 Identities=8% Similarity=0.066 Sum_probs=31.0
Q ss_pred eEEEEEecCCCceeeeeecCCCCCcceeeceeEEcCeEEEEeCCccCccccCcccCCCceEEEEeCCCCcee
Q 039692 94 AVVVAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRII 165 (417)
Q Consensus 94 ~~l~ald~~tG~~~W~~~~~~~~~~~~~~sp~v~~~~v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~~~ 165 (417)
+.|+.+|.++|+..-...........+...| ++.+|++...... ..+.|+.+|.++++..
T Consensus 66 ~~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~---dg~l~v~~~~~~~---------~~~~i~~~d~~~~~~~ 125 (333)
T 2dg1_A 66 GNIFKINPETKEIKRPFVSHKANPAAIKIHK---DGRLFVCYLGDFK---------STGGIFAATENGDNLQ 125 (333)
T ss_dssp CEEEEECTTTCCEEEEEECSSSSEEEEEECT---TSCEEEEECTTSS---------SCCEEEEECTTSCSCE
T ss_pred CEEEEEeCCCCcEEEEeeCCCCCcceEEECC---CCcEEEEeCCCCC---------CCceEEEEeCCCCEEE
Confidence 4567778777765432211111001111112 6778887653100 0158999999877654
No 200
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=91.47 E-value=7.6 Score=34.85 Aligned_cols=22 Identities=14% Similarity=0.129 Sum_probs=18.5
Q ss_pred CEEEEeccCCcEEEEECCCCccc
Q 039692 49 GVVYFPSWNGYLYAVNAFNGALI 71 (417)
Q Consensus 49 g~v~v~~~~g~l~ald~~tG~~~ 71 (417)
+.+|+++..+.|+.+|.+ |+..
T Consensus 83 g~l~v~~~~~~l~~~d~~-g~~~ 104 (314)
T 1pjx_A 83 NQLFVADMRLGLLVVQTD-GTFE 104 (314)
T ss_dssp SEEEEEETTTEEEEEETT-SCEE
T ss_pred CcEEEEECCCCEEEEeCC-CCEE
Confidence 789998876789999998 8764
No 201
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=91.26 E-value=15 Score=38.33 Aligned_cols=85 Identities=2% Similarity=-0.054 Sum_probs=40.4
Q ss_pred eeEEEEEcccceEEEEECCCCcEEEEeecCCCCCCCcceecccccCCeEEEEeccCC-------ceeeeecCCCCCCCcc
Q 039692 284 RDVVVAVQKSGFAWAFDRDSGDIIWFKLAGPGGREGGGVWGAATDGRRVYTNIVNND-------RIIWSTADPSNETAHG 356 (417)
Q Consensus 284 ~~~v~~~~~~G~l~ald~~tG~~lW~~~~~~~~~~g~~~~~~~~~~~~vy~~~~~~~-------~~~W~~~~~~~~~~~~ 356 (417)
++.|++++.+ .|+.+|+++++..--...+ .......++..+++.+++...++- .....+..+... ...
T Consensus 527 ~g~lWigt~~-Gl~~~~~~~~~~~~~~~~g---l~~~~i~~i~~~~g~lWi~t~~Gl~~~~~~~~~~~~~~~~~~~-~~~ 601 (758)
T 3ott_A 527 DGLLWVGFHG-GVMRINPKDESQQSISFGS---FSNNEILSMTCVKNSIWVSTTNGLWIIDRKTMDARQQNMTNKR-FTS 601 (758)
T ss_dssp TSCEEEEETT-EEEEECC--CCCCBCCCCC------CCEEEEEEETTEEEEEESSCEEEEETTTCCEEEC--CCCC-CSE
T ss_pred CCCEEEEecC-ceEEEecCCCceEEecccC---CCccceEEEEECCCCEEEECCCCeEEEcCCCceeEEecCCCCc-eee
Confidence 3568888765 5999999887643211111 111222334445677777664321 111111222212 222
Q ss_pred ceee-eCCeEEeccCCCC
Q 039692 357 PVTV-VNGVLFAGSVSAN 373 (417)
Q Consensus 357 p~~~-~~~~v~~~~~~g~ 373 (417)
.... .++.+|+|+.+|.
T Consensus 602 ~~~~~~~G~l~fG~~~Gl 619 (758)
T 3ott_A 602 LLFDPKEDCVYLGGADGF 619 (758)
T ss_dssp EEEETTTTEEEEECBSEE
T ss_pred eEEECCCCcEEEecCCce
Confidence 2222 4788999988876
No 202
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=91.14 E-value=6 Score=35.65 Aligned_cols=36 Identities=11% Similarity=0.088 Sum_probs=27.4
Q ss_pred eCcEEE--CCEEEE-eccCCcEEEEECCCCccceEeeccc
Q 039692 42 ATPAVA--NGVVYF-PSWNGYLYAVNAFNGALIWEQNLSK 78 (417)
Q Consensus 42 ~~p~~~--~g~v~v-~~~~g~l~ald~~tG~~~W~~~~~~ 78 (417)
+..++. ++++|+ .+.++.|+.||++ |+++.+..+.+
T Consensus 30 SGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g 68 (255)
T 3qqz_A 30 SSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDF 68 (255)
T ss_dssp EEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSS
T ss_pred ceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCC
Confidence 334444 578886 5678899999996 99988888764
No 203
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=90.98 E-value=11 Score=35.96 Aligned_cols=19 Identities=5% Similarity=0.095 Sum_probs=15.3
Q ss_pred eEEEEEcccceEEEEECCC
Q 039692 285 DVVVAVQKSGFAWAFDRDS 303 (417)
Q Consensus 285 ~~v~~~~~~G~l~ald~~t 303 (417)
.+++.++.+|.+..+|..+
T Consensus 335 ~~l~s~~~d~~i~iwd~~~ 353 (430)
T 2xyi_A 335 TILASSGTDRRLHVWDLSK 353 (430)
T ss_dssp TEEEEEETTSCCEEEEGGG
T ss_pred CEEEEEeCCCcEEEEeCCC
Confidence 4677778889999999876
No 204
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=90.84 E-value=15 Score=37.10 Aligned_cols=105 Identities=11% Similarity=-0.029 Sum_probs=58.7
Q ss_pred ccCCCCCCeEEEEECCCCceEEEecCCCCcceeeeccCCCCCCCCCCCCCCCccCCCceE-EEEecCCeeeeEEEEEccc
Q 039692 215 ISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPML-LTISTNGRFRDVVVAVQKS 293 (417)
Q Consensus 215 v~~~~~~~~l~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~p~v-~~~~~~G~~~~~v~~~~~~ 293 (417)
+..++.++.+...|..+|+.+-.+........ ....++. .....+| +.|+.++.|
T Consensus 205 las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~---------------------~h~~~V~~v~~spdg---~~l~s~s~D 260 (611)
T 1nr0_A 205 FASTGGDGTIVLYNGVDGTKTGVFEDDSLKNV---------------------AHSGSVFGLTWSPDG---TKIASASAD 260 (611)
T ss_dssp EEEEETTSCEEEEETTTCCEEEECBCTTSSSC---------------------SSSSCEEEEEECTTS---SEEEEEETT
T ss_pred EEEEECCCcEEEEECCCCcEeeeecccccccc---------------------ccCCCEEEEEECCCC---CEEEEEeCC
Confidence 34556788899999999988765532110000 0011221 2223344 578888899
Q ss_pred ceEEEEECCCCcEEEEeecCCCCCCCcceecccccCCeEEEEeccCCceeee
Q 039692 294 GFAWAFDRDSGDIIWFKLAGPGGREGGGVWGAATDGRRVYTNIVNNDRIIWS 345 (417)
Q Consensus 294 G~l~ald~~tG~~lW~~~~~~~~~~g~~~~~~~~~~~~vy~~~~~~~~~~W~ 345 (417)
+.+...|..+|+.+-+...+.. .. ........++..+.....++.-.+|.
T Consensus 261 ~~v~lWd~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~l~s~s~d~~i~~~~ 310 (611)
T 1nr0_A 261 KTIKIWNVATLKVEKTIPVGTR-IE-DQQLGIIWTKQALVSISANGFINFVN 310 (611)
T ss_dssp SEEEEEETTTTEEEEEEECCSS-GG-GCEEEEEECSSCEEEEETTCCEEEEE
T ss_pred CeEEEEeCCCCceeeeecCCCC-cc-ceeEEEEEcCCEEEEEeCCCcEEEEe
Confidence 9999999999988776664311 00 11112233455555555555555555
No 205
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=90.72 E-value=6.8 Score=35.72 Aligned_cols=40 Identities=10% Similarity=0.006 Sum_probs=23.0
Q ss_pred ceEEEEECCCCcEEEEeecCCCCCCCcceecccccCCeEEEEec
Q 039692 294 GFAWAFDRDSGDIIWFKLAGPGGREGGGVWGAATDGRRVYTNIV 337 (417)
Q Consensus 294 G~l~ald~~tG~~lW~~~~~~~~~~g~~~~~~~~~~~~vy~~~~ 337 (417)
..++++|..+. .|+.-...+ ..+.....+..++.+|+...
T Consensus 90 ~~~~~~d~~~~--~W~~~~~~p--~~r~~~~~~~~~~~iyv~GG 129 (308)
T 1zgk_A 90 SALDCYNPMTN--QWSPCAPMS--VPRNRIGVGVIDGHIYAVGG 129 (308)
T ss_dssp CCEEEEETTTT--EEEECCCCS--SCCBTCEEEEETTEEEEECC
T ss_pred ceEEEECCCCC--eEeECCCCC--cCccccEEEEECCEEEEEcC
Confidence 35899998876 477654311 11222234455778888743
No 206
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=90.25 E-value=15 Score=36.12 Aligned_cols=142 Identities=8% Similarity=-0.010 Sum_probs=73.8
Q ss_pred ceeeeEEEeCCce-------e---e-------CcEEECCEEEEecc-CCcEEEEECCCC--ccceEeec---------cc
Q 039692 28 LRLRWSFYAGKDI-------S---A-------TPAVANGVVYFPSW-NGYLYAVNAFNG--ALIWEQNL---------SK 78 (417)
Q Consensus 28 ~~~~W~~~~~~~~-------~---~-------~p~~~~g~v~v~~~-~g~l~ald~~tG--~~~W~~~~---------~~ 78 (417)
++++-+..++... . + +......++|+.+. +++|+.||.++- ++.=...+ +.
T Consensus 58 ~~vi~~~~~p~~gde~HH~gwn~css~~~~~~~~~~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~ 137 (462)
T 2ece_A 58 SKIVHKVELPYINDELHHFGWNACSSALCPNGKPNIERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGY 137 (462)
T ss_dssp TSEEEEEECSSSCCCBCCCEESCCGGGGSTTCCTTCCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCE
T ss_pred ceEEEEEECCCCCCcccccchhhhhhhcccccCCCccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCC
Confidence 7888888887621 0 0 11134668998874 688999998644 22222222 10
Q ss_pred ----ccCCcceeeEEee-------eeeEEEEEecCCCceeeeeecCCCC---CcceeeceeEEcCeEEEEeCCc----cC
Q 039692 79 ----LTGLSGTGIVVNV-------TVAVVVAVSRSNGELVWSTQIDPRP---RSQITMSGSVYMGAFYVGLSSL----EE 140 (417)
Q Consensus 79 ----~~~~~p~~~v~~~-------~v~~l~ald~~tG~~~W~~~~~~~~---~~~~~~sp~v~~~~v~v~~~~~----~~ 140 (417)
.+.++|.++.... .-+.|..||.+|++++=+.+.+... .+.+.-+| ..+.+|+...+. +.
T Consensus 138 s~Ph~~~~~pdGi~Vs~~g~~~g~~~g~v~vlD~~T~~v~~~~~~~~~~~~~~Yd~~~~p--~~~~mvsS~wg~p~~~~~ 215 (462)
T 2ece_A 138 SRLHTVHCGPDAIYISALGNEEGEGPGGILMLDHYSFEPLGKWEIDRGDQYLAYDFWWNL--PNEVLVSSEWAVPNTIED 215 (462)
T ss_dssp EEEEEEEECSSCEEEEEEEETTSCSCCEEEEECTTTCCEEEECCSBCTTCCCCCCEEEET--TTTEEEECBCCCHHHHTT
T ss_pred CcccceeECCCeEEEEcCCCcCCCCCCeEEEEECCCCeEEEEEccCCCCccccceEEECC--CCCEEEEccCcCcccccc
Confidence 0112233321111 0168999999999998666643221 11122234 133344432110 00
Q ss_pred -ccccCcccCCCceEEEEeCCCCceeceeeec
Q 039692 141 -ALPADQCCTFRGSLAKLDVRNGRIIWQTYML 171 (417)
Q Consensus 141 -~~~~~~~~~~~g~l~ald~~tG~~~W~~~~~ 171 (417)
..+.+.-.....+|..+|.++++++-++++.
T Consensus 216 g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg 247 (462)
T 2ece_A 216 GLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLG 247 (462)
T ss_dssp CCCTTTHHHHSCCEEEEEETTTTEEEEEEESC
T ss_pred ccchhhhhhccCCEEEEEECCCCcEeeEEecC
Confidence 0000000023579999999999888777763
No 207
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=89.95 E-value=11 Score=34.04 Aligned_cols=62 Identities=5% Similarity=0.015 Sum_probs=32.8
Q ss_pred eEEEEE-cccceEEEEECC--CCcEEEEeecCCCCCCCcceecccccCCeEEEEeccCC-ceeeeecC
Q 039692 285 DVVVAV-QKSGFAWAFDRD--SGDIIWFKLAGPGGREGGGVWGAATDGRRVYTNIVNND-RIIWSTAD 348 (417)
Q Consensus 285 ~~v~~~-~~~G~l~ald~~--tG~~lW~~~~~~~~~~g~~~~~~~~~~~~vy~~~~~~~-~~~W~~~~ 348 (417)
+.+|+. ..++.+..+|.+ +|+..-....... ..........+++.+|+....++ -.+|+.+.
T Consensus 243 ~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~~--~~~~~~~~s~dg~~l~~~~~~~~~v~v~~~d~ 308 (343)
T 1ri6_A 243 RHLYACDRTASLITVFSVSEDGSVLSKEGFQPTE--TQPRGFNVDHSGKYLIAAGQKSHHISVYEIVG 308 (343)
T ss_dssp SEEEEEETTTTEEEEEEECTTSCCEEEEEEEECS--SSCCCEEECTTSSEEEEECTTTCEEEEEEEET
T ss_pred CEEEEEecCCCEEEEEEEcCCCCceEEeeeecCC--CccceEEECCCCCEEEEecCCCCeEEEEEEcC
Confidence 356644 467889999887 5544333322110 00111122335677888875443 55776653
No 208
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=89.64 E-value=12 Score=33.97 Aligned_cols=23 Identities=9% Similarity=-0.081 Sum_probs=16.6
Q ss_pred CCEEEEeccC-CcEEEEECCCCccc
Q 039692 48 NGVVYFPSWN-GYLYAVNAFNGALI 71 (417)
Q Consensus 48 ~g~v~v~~~~-g~l~ald~~tG~~~ 71 (417)
+|++|+++.. +.|+.+|.+ |+..
T Consensus 96 dG~l~v~~~~~~~v~~~~~~-g~~~ 119 (305)
T 3dr2_A 96 QQRLVHCEHGRRAITRSDAD-GQAH 119 (305)
T ss_dssp TSCEEEEETTTTEEEEECTT-SCEE
T ss_pred CCCEEEEECCCCEEEEECCC-CCEE
Confidence 6778887653 679999975 7643
No 209
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=89.49 E-value=13 Score=34.28 Aligned_cols=68 Identities=18% Similarity=0.261 Sum_probs=39.1
Q ss_pred EecCCeeeeEEEEEc-ccceEEEEECCCCcEEEEeec--CCCCCCCcceecccccCCeEEEEecc-CC-ceeeeec
Q 039692 277 ISTNGRFRDVVVAVQ-KSGFAWAFDRDSGDIIWFKLA--GPGGREGGGVWGAATDGRRVYTNIVN-ND-RIIWSTA 347 (417)
Q Consensus 277 ~~~~G~~~~~v~~~~-~~G~l~ald~~tG~~lW~~~~--~~~~~~g~~~~~~~~~~~~vy~~~~~-~~-~~~W~~~ 347 (417)
+..+| +.+|+.+ .++.+..+|.++|++...... .+....+........+++.+|+.+.. .+ -.+|..+
T Consensus 218 ~spdg---~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~ 290 (361)
T 3scy_A 218 FNSDG---KFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVD 290 (361)
T ss_dssp ECTTS---SEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEEC
T ss_pred EcCCC---CEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEc
Confidence 34455 4666665 578999999988876444333 11111111122234467788888766 33 5567765
No 210
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=89.39 E-value=16 Score=35.11 Aligned_cols=99 Identities=11% Similarity=0.026 Sum_probs=52.4
Q ss_pred CCEEEEecc-CCcEEEEECCCCccceEeecccccCCcceeeEE-ee---ee------eEEEEEecCCCceeeee-ecCCC
Q 039692 48 NGVVYFPSW-NGYLYAVNAFNGALIWEQNLSKLTGLSGTGIVV-NV---TV------AVVVAVSRSNGELVWST-QIDPR 115 (417)
Q Consensus 48 ~g~v~v~~~-~g~l~ald~~tG~~~W~~~~~~~~~~~p~~~v~-~~---~v------~~l~ald~~tG~~~W~~-~~~~~ 115 (417)
++.||+.+. ++.|+.+|+++|++.-...... .|...+. ++ ++ ..|+.+|..++...-.. .....
T Consensus 141 ~g~lyv~d~~~~~I~~id~~~g~~~~~~~~~~----~~~ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~~~~g~~~~~ 216 (409)
T 3hrp_A 141 NNTVLAYQRDDPRVRLISVDDNKVTTVHPGFK----GGKPAVTKDKQRVYSIGWEGTHTVYVYMKASGWAPTRIGQLGST 216 (409)
T ss_dssp TTEEEEEETTTTEEEEEETTTTEEEEEEETCC----BCBCEECTTSSEEEEEBSSTTCEEEEEEGGGTTCEEEEEECCTT
T ss_pred CCCEEEEecCCCcEEEEECCCCEEEEeeccCC----CCceeEecCCCcEEEEecCCCceEEEEEcCCCceeEEeeeccch
Confidence 678998875 4789999998887643222211 1210011 11 11 27888887666542222 11110
Q ss_pred CCcceeeceeEE--cCeEEEEeCCccCccccCcccCCCceEEEEeCCCCcee
Q 039692 116 PRSQITMSGSVY--MGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRII 165 (417)
Q Consensus 116 ~~~~~~~sp~v~--~~~v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~~~ 165 (417)
... ....-++. ++.+|+... ++.|+.+|.++++..
T Consensus 217 ~~~-~p~~iav~p~~g~lyv~d~--------------~~~I~~~d~~~~~~~ 253 (409)
T 3hrp_A 217 FSG-KIGAVALDETEEWLYFVDS--------------NKNFGRFNVKTQEVT 253 (409)
T ss_dssp SCS-CCCBCEECTTSSEEEEECT--------------TCEEEEEETTTCCEE
T ss_pred hcC-CcEEEEEeCCCCeEEEEEC--------------CCcEEEEECCCCCEE
Confidence 000 01111222 578888443 478999999887643
No 211
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=88.91 E-value=14 Score=33.99 Aligned_cols=67 Identities=12% Similarity=0.137 Sum_probs=34.9
Q ss_pred EecCCeeeeEEEEEccc--ceEEEEEC--CCCcEEEEeecCCCCCCCcceecccccCCeEEEEeccCC-ceeeeecC
Q 039692 277 ISTNGRFRDVVVAVQKS--GFAWAFDR--DSGDIIWFKLAGPGGREGGGVWGAATDGRRVYTNIVNND-RIIWSTAD 348 (417)
Q Consensus 277 ~~~~G~~~~~v~~~~~~--G~l~ald~--~tG~~lW~~~~~~~~~~g~~~~~~~~~~~~vy~~~~~~~-~~~W~~~~ 348 (417)
+..+| +.||+...+ +.+..++. ++|++........+ ..........+++.+|+.+..++ -.+|+.+.
T Consensus 266 ~spdg---~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~g--~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d~ 337 (361)
T 3scy_A 266 LSPDG---KYLYASNRLKADGVAIFKVDETNGTLTKVGYQLTG--IHPRNFIITPNGKYLLVACRDTNVIQIFERDQ 337 (361)
T ss_dssp ECTTS---SEEEEEECSSSCEEEEEEECTTTCCEEEEEEEECS--SCCCEEEECTTSCEEEEEETTTTEEEEEEECT
T ss_pred ECCCC---CEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecCC--CCCceEEECCCCCEEEEEECCCCCEEEEEEEC
Confidence 34555 467776554 66666555 57875433332110 00112223346677888875554 45666653
No 212
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=88.16 E-value=14 Score=32.99 Aligned_cols=64 Identities=9% Similarity=-0.039 Sum_probs=35.7
Q ss_pred CCEEEEeccCCcEEEEECCCCcc---------ceEeeccc-cc---CCcce--e--eEEeeeeeEEEEEecCCCceeeee
Q 039692 48 NGVVYFPSWNGYLYAVNAFNGAL---------IWEQNLSK-LT---GLSGT--G--IVVNVTVAVVVAVSRSNGELVWST 110 (417)
Q Consensus 48 ~g~v~v~~~~g~l~ald~~tG~~---------~W~~~~~~-~~---~~~p~--~--~v~~~~v~~l~ald~~tG~~~W~~ 110 (417)
+..++.++.++.|..+|.++++. +-...... .+ ..+|. + ++..+..+.|+.+|..+++.+-..
T Consensus 71 ~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~ 150 (351)
T 3f3f_A 71 GRIIASASYDKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSW 150 (351)
T ss_dssp CSEEEEEETTSCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCC
T ss_pred CCEEEEEcCCCeEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccc
Confidence 45677788899999999988743 22222211 10 01111 0 111112288889998888765544
Q ss_pred e
Q 039692 111 Q 111 (417)
Q Consensus 111 ~ 111 (417)
.
T Consensus 151 ~ 151 (351)
T 3f3f_A 151 T 151 (351)
T ss_dssp E
T ss_pred c
Confidence 3
No 213
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=88.06 E-value=18 Score=34.23 Aligned_cols=153 Identities=7% Similarity=-0.017 Sum_probs=75.2
Q ss_pred CceEEEEeCCCCceeceeeecCCCCCCCCCCCCccccCCCceeecccCcc-cCCCCCCCCCCCCcccCCCCCCeEEEEEC
Q 039692 151 RGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYSGAAVWGSSPAIDVIRRQK-QNNQTTKPTHPDQCISSDIYANSIVALDI 229 (417)
Q Consensus 151 ~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~~gg~~~~~~pa~d~~~~~~-~~~~~~~p~~~~~~v~~~~~~~~l~ald~ 229 (417)
|+.|.-.|.+||+.+-++........ .+ ..-++.++.... ... .|- ..-.+..++.+..+...|+
T Consensus 202 D~TIkIWDl~TGk~l~tL~g~~~~v~--------~v--~~vafSpdG~~lvs~s---~~~-~~w~laSGs~D~tIklWd~ 267 (356)
T 2w18_A 202 MNNIVIWNLKTGQLLKKMHIDDSYQA--------SV--CHKAYSEMGLLFIVLS---HPC-AKESESLRSPVFQLIVINP 267 (356)
T ss_dssp TSEEEEEETTTCCEEEEEECCC---C--------CC--EEEEEEETTEEEEEEC----------------CCEEEEEEET
T ss_pred CCcEEEEECCCCcEEEEEcCCCccee--------ee--EEEEECCCCCEEEEec---cCC-CcceeeccCCCcEEEEEEC
Confidence 79999999999999888753110000 00 011233321110 000 000 0001234567788999999
Q ss_pred CCCceEEEecCCCCcceeeeccCCCCCCCCCCCCCCCccCCCceEEEEecCCeeeeEEEEEcccceEEEEECCCCcEEEE
Q 039692 230 DSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDIIWF 309 (417)
Q Consensus 230 ~tG~~~W~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~p~v~~~~~~G~~~~~v~~~~~~G~l~ald~~tG~~lW~ 309 (417)
++|+.+-.+.....+. ....++ +...+ +..+..++.|+.+..-|..+|+.+=+
T Consensus 268 ~tgk~l~v~~~~~p~G-----------------------h~~~~l-sg~~s---g~~lASgS~DgTIkIWDl~tGk~l~t 320 (356)
T 2w18_A 268 KTTLSVGVMLYCLPPG-----------------------QAGRFL-EGDVK---DHCAAAILTSGTIAIWDLLLGQCTAL 320 (356)
T ss_dssp TTTEEEEEEEECCCTT-----------------------CCCCEE-EEEEE---TTEEEEEETTSCEEEEETTTCSEEEE
T ss_pred CCCEEEEEEEeeccCC-----------------------CcceeE-ccccC---CCEEEEEcCCCcEEEEECCCCcEEEE
Confidence 9999865432110000 001122 11111 23566677899999999999998876
Q ss_pred eecCCCCCCCcceecccccCCeEEEEeccCCceeeee
Q 039692 310 KLAGPGGREGGGVWGAATDGRRVYTNIVNNDRIIWST 346 (417)
Q Consensus 310 ~~~~~~~~~g~~~~~~~~~~~~vy~~~~~~~~~~W~~ 346 (417)
.+...... ........++..++....+..-.+|..
T Consensus 321 L~gH~~~v--vs~vafSPDG~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 321 LPPVSDQH--WSFVKWSGTDSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp ECCC--CC--CCEEEECSSSSEEEEECTTSCEEEEEE
T ss_pred ecCCCCCe--EEEEEECCCCCEEEEEECCCcEEEecC
Confidence 54211000 011112235667777766666677864
No 214
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=88.01 E-value=2.6 Score=39.66 Aligned_cols=22 Identities=23% Similarity=0.376 Sum_probs=19.5
Q ss_pred CCcEEEEECC---CCccceEeeccc
Q 039692 57 NGYLYAVNAF---NGALIWEQNLSK 78 (417)
Q Consensus 57 ~g~l~ald~~---tG~~~W~~~~~~ 78 (417)
+..|+++|+. ||+++|...+..
T Consensus 99 ~~~v~~~Dl~~~~tg~~~~~~dL~~ 123 (334)
T 2p9w_A 99 ASSFHSFNLPLSENSKPVWSVNFEK 123 (334)
T ss_dssp CCEEEEEESSCCTTCCCSEEEESHH
T ss_pred CCEEEEEcCCcCCCCCEEEEecCcc
Confidence 5779999999 999999999863
No 215
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=87.79 E-value=14 Score=32.59 Aligned_cols=56 Identities=7% Similarity=-0.036 Sum_probs=32.8
Q ss_pred eEEEEEc-ccceEEEEECCCCcEEEEeecCCCCCCCcceecccccCCeEEEEeccCCceeeeec
Q 039692 285 DVVVAVQ-KSGFAWAFDRDSGDIIWFKLAGPGGREGGGVWGAATDGRRVYTNIVNNDRIIWSTA 347 (417)
Q Consensus 285 ~~v~~~~-~~G~l~ald~~tG~~lW~~~~~~~~~~g~~~~~~~~~~~~vy~~~~~~~~~~W~~~ 347 (417)
+.||+++ ..+.++.+|.++++..-.... +..-.+++.+++.+|+.+...++ ++.++
T Consensus 179 ~~lyv~d~~~~~I~~~~~~g~~~~~~~~~------~~~P~gi~~d~~~lyva~~~~~~-v~~~d 235 (267)
T 1npe_A 179 SQLCWVDAGTHRAECLNPAQPGRRKVLEG------LQYPFAVTSYGKNLYYTDWKTNS-VIAMD 235 (267)
T ss_dssp TEEEEEETTTTEEEEEETTEEEEEEEEEC------CCSEEEEEEETTEEEEEETTTTE-EEEEE
T ss_pred CEEEEEECCCCEEEEEecCCCceEEEecC------CCCceEEEEeCCEEEEEECCCCe-EEEEe
Confidence 4566664 457899999875543322221 11223456778889998766553 34444
No 216
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=87.31 E-value=17 Score=32.99 Aligned_cols=112 Identities=18% Similarity=0.218 Sum_probs=57.0
Q ss_pred CcEEECCEEEEecc-----CCcEEEEECCCCccceEeecccc---cCCcce-----eeEEeee---------eeEEEEEe
Q 039692 43 TPAVANGVVYFPSW-----NGYLYAVNAFNGALIWEQNLSKL---TGLSGT-----GIVVNVT---------VAVVVAVS 100 (417)
Q Consensus 43 ~p~~~~g~v~v~~~-----~g~l~ald~~tG~~~W~~~~~~~---~~~~p~-----~~v~~~~---------v~~l~ald 100 (417)
.++..++.||+... ...++++|..+++ |+.-...+ ...+.+ ..+..|. ...++.+|
T Consensus 19 ~~~~~~~~i~v~GG~~~~~~~~~~~~d~~~~~--W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~d 96 (308)
T 1zgk_A 19 HAPKVGRLIYTAGGYFRQSLSYLEAYNPSNGT--WLRLADLQVPRSGLAGCVVGGLLYAVGGRNNSPDGNTDSSALDCYN 96 (308)
T ss_dssp --CCCCCCEEEECCBSSSBCCCEEEEETTTTE--EEECCCCSSCCBSCEEEEETTEEEEECCEEEETTEEEECCCEEEEE
T ss_pred cccCCCCEEEEEeCcCCCCcceEEEEcCCCCe--EeECCCCCcccccceEEEECCEEEEECCCcCCCCCCeecceEEEEC
Confidence 34445565655432 3579999998664 88653211 111111 0111111 14588999
Q ss_pred cCCCceeeeeecCCCCCcceeeceeEEcCeEEEEeCCccCccccCcccCCCceEEEEeCCCCceeceee
Q 039692 101 RSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTY 169 (417)
Q Consensus 101 ~~tG~~~W~~~~~~~~~~~~~~sp~v~~~~v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~~~W~~~ 169 (417)
..+. .|+.-.+ .+......+-++.++.+|+........ ....++.+|+.+. .|+.-
T Consensus 97 ~~~~--~W~~~~~-~p~~r~~~~~~~~~~~iyv~GG~~~~~--------~~~~~~~yd~~~~--~W~~~ 152 (308)
T 1zgk_A 97 PMTN--QWSPCAP-MSVPRNRIGVGVIDGHIYAVGGSHGCI--------HHNSVERYEPERD--EWHLV 152 (308)
T ss_dssp TTTT--EEEECCC-CSSCCBTCEEEEETTEEEEECCEETTE--------ECCCEEEEETTTT--EEEEC
T ss_pred CCCC--eEeECCC-CCcCccccEEEEECCEEEEEcCCCCCc--------ccccEEEECCCCC--eEeEC
Confidence 8776 4765532 111112223345688888754321110 1257999999765 57643
No 217
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=87.06 E-value=5.4 Score=41.74 Aligned_cols=27 Identities=7% Similarity=0.027 Sum_probs=20.9
Q ss_pred eeEEEEEcccceEEEEECCCCcEEEEe
Q 039692 284 RDVVVAVQKSGFAWAFDRDSGDIIWFK 310 (417)
Q Consensus 284 ~~~v~~~~~~G~l~ald~~tG~~lW~~ 310 (417)
+..++.++.+|.++..|..+++..+..
T Consensus 170 ~~~l~sgs~dg~I~iwd~~~~~~~~~~ 196 (753)
T 3jro_A 170 SRKFVTGGADNLVKIWKYNSDAQTYVL 196 (753)
T ss_dssp GCCEEEEETTSCEEEEEEETTTTEEEE
T ss_pred CCEEEEEECCCeEEEEeccCCccccee
Confidence 457888889999999999888655443
No 218
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=87.05 E-value=19 Score=36.76 Aligned_cols=99 Identities=9% Similarity=-0.038 Sum_probs=53.4
Q ss_pred CCEEEEeccCCcEEEEECCCCccceEeecccc-------cCCccee--eEEe---e------eeeEEEEEecCCCceeee
Q 039692 48 NGVVYFPSWNGYLYAVNAFNGALIWEQNLSKL-------TGLSGTG--IVVN---V------TVAVVVAVSRSNGELVWS 109 (417)
Q Consensus 48 ~g~v~v~~~~g~l~ald~~tG~~~W~~~~~~~-------~~~~p~~--~v~~---~------~v~~l~ald~~tG~~~W~ 109 (417)
+|.+++.+.++.|+.+|+++|+..-....... ...+|.+ ++.. . ..+.++.+|.++|+. -+
T Consensus 27 dg~~~~~~~dg~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~-~~ 105 (723)
T 1xfd_A 27 DTEFIYREQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDP-QS 105 (723)
T ss_dssp SSCBCCCCSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCC-EE
T ss_pred CCcEEEEeCCCCEEEEECCCCcEEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCce-Ee
Confidence 44433445678899999988887654443221 1123322 1111 1 127888999988876 22
Q ss_pred eecCCCC---CcceeeceeEEcC-eEEEEeCCccCccccCcccCCCceEEEEeCCCCcee
Q 039692 110 TQIDPRP---RSQITMSGSVYMG-AFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRII 165 (417)
Q Consensus 110 ~~~~~~~---~~~~~~sp~v~~~-~v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~~~ 165 (417)
....... ...+.-+| ++ .|.+... +.|+.+|..+|+.+
T Consensus 106 l~~~~~~~~~~~~~~~SP---dG~~la~~~~---------------~~i~~~~~~~g~~~ 147 (723)
T 1xfd_A 106 LDPPEVSNAKLQYAGWGP---KGQQLIFIFE---------------NNIYYCAHVGKQAI 147 (723)
T ss_dssp CCCTTCCSCCCSBCCBCS---STTCEEEEET---------------TEEEEESSSSSCCE
T ss_pred ccCCccccccccccEECC---CCCEEEEEEC---------------CeEEEEECCCCceE
Confidence 2221111 11233445 55 4554442 58999999888764
No 219
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=86.56 E-value=26 Score=34.41 Aligned_cols=163 Identities=12% Similarity=0.061 Sum_probs=79.4
Q ss_pred CcEEEEECCC-----CccceEeecccc--------c-CCcce-ee-----EEee-e-e-----eEEEEEecCCC----ce
Q 039692 58 GYLYAVNAFN-----GALIWEQNLSKL--------T-GLSGT-GI-----VVNV-T-V-----AVVVAVSRSNG----EL 106 (417)
Q Consensus 58 g~l~ald~~t-----G~~~W~~~~~~~--------~-~~~p~-~~-----v~~~-~-v-----~~l~ald~~tG----~~ 106 (417)
-.|..+|.+. ||++-+..++.. . .+|.| +. ..+. + + ++++.||.++- ++
T Consensus 43 d~la~vDvdp~s~ty~~vi~~~~~p~~gde~HH~gwn~css~~~~~~~~~~~r~~l~v~~l~s~~I~viD~~t~p~~p~~ 122 (462)
T 2ece_A 43 DFIAVVDVNPKSETYSKIVHKVELPYINDELHHFGWNACSSALCPNGKPNIERRFLIVPGLRSSRIYIIDTKPNPREPKI 122 (462)
T ss_dssp CEEEEEECCTTSTTTTSEEEEEECSSSCCCBCCCEESCCGGGGSTTCCTTCCSCEEEEEBTTTCCEEEEECCSCTTSCEE
T ss_pred CeEEEEECCCCCCCcceEEEEEECCCCCCcccccchhhhhhhcccccCCCccCCEEEEccCCCCeEEEEECCCCCCCcee
Confidence 3688899887 999999888751 1 12222 11 1122 1 2 99999998644 33
Q ss_pred eeeee---c----CCCCCcceeeceeEEcCeEEEEeCCccCccccCcccCCCceEEEEeCCCCceeceeeecCCCCCCCC
Q 039692 107 VWSTQ---I----DPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNGGKRG 179 (417)
Q Consensus 107 ~W~~~---~----~~~~~~~~~~sp~v~~~~v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~~~W~~~~~~~~~~~~~ 179 (417)
.=..+ + +....-.+.+.| ++ +||...+... ....+.|..||.+|++++=+.+....... .+
T Consensus 123 ~k~ie~~~~~~~~g~s~Ph~~~~~p---dG-i~Vs~~g~~~-------g~~~g~v~vlD~~T~~v~~~~~~~~~~~~-~~ 190 (462)
T 2ece_A 123 IKVIEPEEVKKVSGYSRLHTVHCGP---DA-IYISALGNEE-------GEGPGGILMLDHYSFEPLGKWEIDRGDQY-LA 190 (462)
T ss_dssp EEEECHHHHHHHHCEEEEEEEEECS---SC-EEEEEEEETT-------SCSCCEEEEECTTTCCEEEECCSBCTTCC-CC
T ss_pred eeeechhhcccccCCCcccceeECC---Ce-EEEEcCCCcC-------CCCCCeEEEEECCCCeEEEEEccCCCCcc-cc
Confidence 32221 0 100000122333 55 8875543211 11147899999999998755443211100 00
Q ss_pred CCCCccccCCCceeecccCcccCCCCCCCC-CCCCcccC---CCCCCeEEEEECCCCceEEEecCC
Q 039692 180 GYSGAAVWGSSPAIDVIRRQKQNNQTTKPT-HPDQCISS---DIYANSIVALDIDSGRIAWAKPLG 241 (417)
Q Consensus 180 ~~~gg~~~~~~pa~d~~~~~~~~~~~~~p~-~~~~~v~~---~~~~~~l~ald~~tG~~~W~~~~~ 241 (417)
+ ..-+.++.+.+....-+.|. ...+.+.. ..+...|+.+|.++++++-+.+.+
T Consensus 191 Y---------d~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg 247 (462)
T 2ece_A 191 Y---------DFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLG 247 (462)
T ss_dssp C---------CEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESC
T ss_pred c---------eEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecC
Confidence 0 01112222211110000000 00000000 034689999999999988887775
No 220
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=86.55 E-value=5.3 Score=37.94 Aligned_cols=24 Identities=29% Similarity=0.371 Sum_probs=21.0
Q ss_pred eeEEEEEcccceEEEEECCCCcEE
Q 039692 284 RDVVVAVQKSGFAWAFDRDSGDII 307 (417)
Q Consensus 284 ~~~v~~~~~~G~l~ald~~tG~~l 307 (417)
+..|+.++.||.++..|..+|+.+
T Consensus 354 ~~~l~s~s~dg~v~iwd~~~~~~~ 377 (447)
T 3dw8_B 354 DSVVMTGSYNNFFRMFDRNTKRDI 377 (447)
T ss_dssp SSEEEEECSTTEEEEEETTTCCEE
T ss_pred CCEEEEeccCCEEEEEEcCCCcce
Confidence 357888899999999999999887
No 221
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=86.34 E-value=4.3 Score=38.74 Aligned_cols=84 Identities=8% Similarity=-0.122 Sum_probs=56.8
Q ss_pred eEEEEECCCCceEEEecCCCCcceeeeccCCCCCCCCCCCCCCCccCCCceEEEEecCCeeeeEEEEEc----------c
Q 039692 223 SIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQ----------K 292 (417)
Q Consensus 223 ~l~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~p~v~~~~~~G~~~~~v~~~~----------~ 292 (417)
.+..||.+|++++=+++.+.. | -..+..+| +.+|+++ +
T Consensus 47 ~vsvID~~t~~v~~~i~vG~~----------------------------P-~i~~spDg---~~lyVan~~~~r~~~G~~ 94 (368)
T 1mda_H 47 ENWVSCAGCGVTLGHSLGAFL----------------------------S-LAVAGHSG---SDFALASTSFARSAKGKR 94 (368)
T ss_dssp EEEEEETTTTEEEEEEEECTT----------------------------C-EEEECTTS---SCEEEEEEEETTTTSSSE
T ss_pred eEEEEECCCCeEEEEEeCCCC----------------------------C-ceEECCCC---CEEEEEcccccccccCCC
Confidence 899999999999988776542 2 12233454 4678775 4
Q ss_pred cceEEEEECCCCcEEEEeecC-CCCC---CCcceecccccCCeEEEEecc
Q 039692 293 SGFAWAFDRDSGDIIWFKLAG-PGGR---EGGGVWGAATDGRRVYTNIVN 338 (417)
Q Consensus 293 ~G~l~ald~~tG~~lW~~~~~-~~~~---~g~~~~~~~~~~~~vy~~~~~ 338 (417)
++.|..+|+.|++++-+..++ +..+ .......+..|++.+|+.+..
T Consensus 95 ~~~VsviD~~T~~vv~~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~ 144 (368)
T 1mda_H 95 TDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFG 144 (368)
T ss_dssp EEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECS
T ss_pred CCEEEEEECCCCCEEEEEECCCccccccCCCcceEEEcCCCCEEEEEccC
Confidence 688999999999999998864 1110 111222344577888888754
No 222
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=86.10 E-value=19 Score=32.43 Aligned_cols=40 Identities=13% Similarity=0.096 Sum_probs=23.8
Q ss_pred ceEEEEECCCCcEEEEeecCCCCCCCcceecccccCCeEEEEec
Q 039692 294 GFAWAFDRDSGDIIWFKLAGPGGREGGGVWGAATDGRRVYTNIV 337 (417)
Q Consensus 294 G~l~ald~~tG~~lW~~~~~~~~~~g~~~~~~~~~~~~vy~~~~ 337 (417)
..++++|.++. .|+.-...+ ........++.++.||+...
T Consensus 169 ~~~~~yd~~~~--~W~~~~~~p--~~r~~~~~~~~~~~i~v~GG 208 (306)
T 3ii7_A 169 NSCEVYDPATE--TWTELCPMI--EARKNHGLVFVKDKIFAVGG 208 (306)
T ss_dssp CCEEEEETTTT--EEEEECCCS--SCCBSCEEEEETTEEEEECC
T ss_pred ceEEEeCCCCC--eEEECCCcc--chhhcceEEEECCEEEEEeC
Confidence 45899999876 587664311 11222234455778888744
No 223
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=86.10 E-value=23 Score=33.36 Aligned_cols=22 Identities=5% Similarity=-0.064 Sum_probs=16.4
Q ss_pred CCEEEEeccCCcEEEEECCCCc
Q 039692 48 NGVVYFPSWNGYLYAVNAFNGA 69 (417)
Q Consensus 48 ~g~v~v~~~~g~l~ald~~tG~ 69 (417)
+..|+.++.+|.|..+|..+++
T Consensus 40 g~~la~g~~dg~v~iw~~~~~~ 61 (447)
T 3dw8_B 40 GELLATGDKGGRVVIFQQEQEN 61 (447)
T ss_dssp SSEEEEEETTSEEEEEEECC--
T ss_pred CCEEEEEcCCCeEEEEEecCCC
Confidence 4467777889999999998877
No 224
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=85.93 E-value=14 Score=32.67 Aligned_cols=102 Identities=10% Similarity=0.030 Sum_probs=57.0
Q ss_pred CCEEEEeccC---CcEEEEECCCCccceEeecccccCCcceeeEEe---e--ee-----eEEEEEecCCCceeeeeecCC
Q 039692 48 NGVVYFPSWN---GYLYAVNAFNGALIWEQNLSKLTGLSGTGIVVN---V--TV-----AVVVAVSRSNGELVWSTQIDP 114 (417)
Q Consensus 48 ~g~v~v~~~~---g~l~ald~~tG~~~W~~~~~~~~~~~p~~~v~~---~--~v-----~~l~ald~~tG~~~W~~~~~~ 114 (417)
++.||+++.. +.|+.++. +|+.+=..... .. ..|.++..+ + ++ +.|+.+|.++++..-.....
T Consensus 133 ~g~lyv~~~~~~~~~I~~~~~-dg~~~~~~~~~-~~-~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~- 208 (267)
T 1npe_A 133 RGNLYWTDWNRDNPKIETSHM-DGTNRRILAQD-NL-GLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRKVLEGL- 208 (267)
T ss_dssp TTEEEEEECCSSSCEEEEEET-TSCCCEEEECT-TC-SCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEEEEEEECC-
T ss_pred CCEEEEEECCCCCcEEEEEec-CCCCcEEEEEC-CC-CCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCceEEEecCC-
Confidence 5789988753 67888887 45432111111 11 234443221 1 22 77888887644332222211
Q ss_pred CCCcceeeceeEEcCeEEEEeCCccCccccCcccCCCceEEEEeCCCCceeceeee
Q 039692 115 RPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYM 170 (417)
Q Consensus 115 ~~~~~~~~sp~v~~~~v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~~~W~~~~ 170 (417)
.. ...-.+.++.+|+.... .+.|+.+|+++|+++=+...
T Consensus 209 --~~--P~gi~~d~~~lyva~~~-------------~~~v~~~d~~~g~~~~~i~~ 247 (267)
T 1npe_A 209 --QY--PFAVTSYGKNLYYTDWK-------------TNSVIAMDLAISKEMDTFHP 247 (267)
T ss_dssp --CS--EEEEEEETTEEEEEETT-------------TTEEEEEETTTTEEEEEECC
T ss_pred --CC--ceEEEEeCCEEEEEECC-------------CCeEEEEeCCCCCceEEEcc
Confidence 11 11223568889997764 57999999999998755443
No 225
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=85.64 E-value=20 Score=35.74 Aligned_cols=23 Identities=13% Similarity=0.196 Sum_probs=18.7
Q ss_pred eEEEEEcccc--eEEEEECCCCcEE
Q 039692 285 DVVVAVQKSG--FAWAFDRDSGDII 307 (417)
Q Consensus 285 ~~v~~~~~~G--~l~ald~~tG~~l 307 (417)
+.|+....+| .|+.+|.++|+..
T Consensus 207 ~~l~~~~~~~~~~i~~~d~~~~~~~ 231 (582)
T 3o4h_A 207 KVTAGLETAREARLVTVDPRDGSVE 231 (582)
T ss_dssp CEEEEEECSSCEEEEEECTTTCCEE
T ss_pred CEEEEccCCCeeEEEEEcCCCCcEE
Confidence 4566666777 8999999999987
No 226
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=85.51 E-value=20 Score=32.23 Aligned_cols=39 Identities=10% Similarity=0.087 Sum_probs=22.6
Q ss_pred ceEEEEECCCCcEEEEeecCCCCCCCcceecccccCCeEEEEe
Q 039692 294 GFAWAFDRDSGDIIWFKLAGPGGREGGGVWGAATDGRRVYTNI 336 (417)
Q Consensus 294 G~l~ald~~tG~~lW~~~~~~~~~~g~~~~~~~~~~~~vy~~~ 336 (417)
..++++|..+.+ |+.....+ ........+..++.+|+..
T Consensus 118 ~~~~~~d~~~~~--W~~~~~~p--~~r~~~~~~~~~~~iyv~G 156 (306)
T 3ii7_A 118 YLFECYDTRTES--WHTKPSML--TQRCSHGMVEANGLIYVCG 156 (306)
T ss_dssp CCEEEEETTTTE--EEEECCCS--SCCBSCEEEEETTEEEEEC
T ss_pred eeEEEEeCCCCc--eEeCCCCc--CCcceeEEEEECCEEEEEC
Confidence 359999998764 87754311 1122223345577788774
No 227
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=85.48 E-value=2.2 Score=39.81 Aligned_cols=20 Identities=10% Similarity=-0.026 Sum_probs=15.9
Q ss_pred eeEEEEEcccceEEEEECCC
Q 039692 284 RDVVVAVQKSGFAWAFDRDS 303 (417)
Q Consensus 284 ~~~v~~~~~~G~l~ald~~t 303 (417)
++.++.++.||.++..|..+
T Consensus 158 ~~~l~~~~~d~~i~iwd~~~ 177 (377)
T 3dwl_C 158 NVLLAAGCADRKAYVLSAYV 177 (377)
T ss_dssp SSEEEEEESSSCEEEEEECC
T ss_pred CCEEEEEeCCCEEEEEEEEe
Confidence 35778888899999999854
No 228
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=84.59 E-value=23 Score=32.04 Aligned_cols=101 Identities=13% Similarity=0.163 Sum_probs=52.6
Q ss_pred CCEEEEeccC---CcEEEEECCCCccceEeecccccCCcceeeE---------EeeeeeEEEEEecCCCc-eeeeeec--
Q 039692 48 NGVVYFPSWN---GYLYAVNAFNGALIWEQNLSKLTGLSGTGIV---------VNVTVAVVVAVSRSNGE-LVWSTQI-- 112 (417)
Q Consensus 48 ~g~v~v~~~~---g~l~ald~~tG~~~W~~~~~~~~~~~p~~~v---------~~~~v~~l~ald~~tG~-~~W~~~~-- 112 (417)
++.+|+++.. ..|+.+|..+|++.-....... ..+.++. .+...+.||.+|..+|+ .+|....
T Consensus 82 dG~l~vad~~~~~~~v~~~d~~~g~~~~~~~~~~~--~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~ 159 (306)
T 2p4o_A 82 NGDLVATGWNADSIPVVSLVKSDGTVETLLTLPDA--IFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPML 159 (306)
T ss_dssp TSCEEEEEECTTSCEEEEEECTTSCEEEEEECTTC--SCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGG
T ss_pred CCcEEEEeccCCcceEEEEcCCCCeEEEEEeCCCc--cccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCcc
Confidence 6788988743 2599999889987543333221 1121211 11112788999987664 3342210
Q ss_pred ---CCCCCcceeeceeEEcCeEEEEeCCccCccccCcccCCCceEEEEeCCC-Cc
Q 039692 113 ---DPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRN-GR 163 (417)
Q Consensus 113 ---~~~~~~~~~~sp~v~~~~v~v~~~~~~~~~~~~~~~~~~g~l~ald~~t-G~ 163 (417)
...............++.+|+.... .+.|+.+|.+. |+
T Consensus 160 ~~~~~~~~~~~pngis~dg~~lyv~d~~-------------~~~I~~~~~~~~g~ 201 (306)
T 2p4o_A 160 ARSNSESVFPAANGLKRFGNFLYVSNTE-------------KMLLLRIPVDSTDK 201 (306)
T ss_dssp SCSSTTCCSCSEEEEEEETTEEEEEETT-------------TTEEEEEEBCTTSC
T ss_pred ccccccCCCCcCCCcCcCCCEEEEEeCC-------------CCEEEEEEeCCCCC
Confidence 0000000011112235578887764 57899999864 44
No 229
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=84.33 E-value=25 Score=32.38 Aligned_cols=90 Identities=16% Similarity=0.122 Sum_probs=49.9
Q ss_pred EEECCEEEEecc--CCcEEEEECCCCccceEeecccc-c-CCcceeeEE-------eee----------eeEEEEEecCC
Q 039692 45 AVANGVVYFPSW--NGYLYAVNAFNGALIWEQNLSKL-T-GLSGTGIVV-------NVT----------VAVVVAVSRSN 103 (417)
Q Consensus 45 ~~~~g~v~v~~~--~g~l~ald~~tG~~~W~~~~~~~-~-~~~p~~~v~-------~~~----------v~~l~ald~~t 103 (417)
++.+++||+... ...++++|..+.+..|+.-..-+ . ......++. .|. ...++.+|..+
T Consensus 16 ~~~~~~iyv~GG~~~~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~ 95 (357)
T 2uvk_A 16 AIDNDTVYIGLGSAGTAWYKLDTQAKDKKWTALAAFPGGPRDQATSAFIDGNLYVFGGIGKNSEGLTQVFNDVHKYNPKT 95 (357)
T ss_dssp EEETTEEEEECGGGTTCEEEEETTSSSCCEEECCCCTTCCCBSCEEEEETTEEEEECCEEECTTSCEEECCCEEEEETTT
T ss_pred EEECCEEEEEeCcCCCeEEEEccccCCCCeeECCCCCCCcCccceEEEECCEEEEEcCCCCCCCccceeeccEEEEeCCC
Confidence 455999998652 45799999987677898654322 1 111111111 111 14588888876
Q ss_pred CceeeeeecCCCCCcceeeceeEEcCeEEEEeC
Q 039692 104 GELVWSTQIDPRPRSQITMSGSVYMGAFYVGLS 136 (417)
Q Consensus 104 G~~~W~~~~~~~~~~~~~~sp~v~~~~v~v~~~ 136 (417)
.+ |+.-..-.+......+-++.++.||+...
T Consensus 96 ~~--W~~~~~~~p~~r~~~~~~~~~~~iyv~GG 126 (357)
T 2uvk_A 96 NS--WVKLMSHAPMGMAGHVTFVHNGKAYVTGG 126 (357)
T ss_dssp TE--EEECSCCCSSCCSSEEEEEETTEEEEEEC
T ss_pred Cc--EEECCCCCCcccccceEEEECCEEEEEeC
Confidence 54 87653211111222233457888887543
No 230
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=84.24 E-value=23 Score=31.75 Aligned_cols=65 Identities=17% Similarity=0.126 Sum_probs=37.9
Q ss_pred eEEEEEecCCCceeeeeecCCCCCcceeeceeEEcCeEEEEeCCccCccccCcccCCCceEEEEeCCCCc-eeceee
Q 039692 94 AVVVAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGR-IIWQTY 169 (417)
Q Consensus 94 ~~l~ald~~tG~~~W~~~~~~~~~~~~~~sp~v~~~~v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~-~~W~~~ 169 (417)
..++++|..++ .|+.-.. .+......+.++.++.+|+....... .....++.+|+.+.+ ..|+.-
T Consensus 31 ~~~~~~d~~~~--~W~~~~~-~p~~r~~~~~~~~~~~l~v~GG~~~~--------~~~~~~~~~d~~~~~~~~W~~~ 96 (301)
T 2vpj_A 31 DVVEKYDPKTQ--EWSFLPS-ITRKRRYVASVSLHDRIYVIGGYDGR--------SRLSSVECLDYTADEDGVWYSV 96 (301)
T ss_dssp CCEEEEETTTT--EEEECCC-CSSCCBSCEEEEETTEEEEECCBCSS--------CBCCCEEEEETTCCTTCCCEEE
T ss_pred eEEEEEcCCCC--eEEeCCC-CChhhccccEEEECCEEEEEcCCCCC--------ccCceEEEEECCCCCCCeeEEC
Confidence 56788998776 4776421 11112233445678888875432111 113579999998876 458754
No 231
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=83.83 E-value=24 Score=31.67 Aligned_cols=39 Identities=21% Similarity=0.253 Sum_probs=22.3
Q ss_pred ceEEEEECCCCcEEEEeecCCCCCCCcceecccccCCeEEEEe
Q 039692 294 GFAWAFDRDSGDIIWFKLAGPGGREGGGVWGAATDGRRVYTNI 336 (417)
Q Consensus 294 G~l~ald~~tG~~lW~~~~~~~~~~g~~~~~~~~~~~~vy~~~ 336 (417)
..++++|..+. .|+.-...+ ........++.++.+|+..
T Consensus 124 ~~~~~~d~~~~--~W~~~~~~p--~~r~~~~~~~~~~~iyv~G 162 (302)
T 2xn4_A 124 SSVEAYNIKSN--EWFHVAPMN--TRRSSVGVGVVGGLLYAVG 162 (302)
T ss_dssp EEEEEEETTTT--EEEEECCCS--SCCBSCEEEEETTEEEEEC
T ss_pred ceEEEEeCCCC--eEeecCCCC--CcccCceEEEECCEEEEEe
Confidence 36889998866 477654311 1122223445577788874
No 232
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=83.77 E-value=44 Score=34.64 Aligned_cols=99 Identities=14% Similarity=0.019 Sum_probs=51.4
Q ss_pred CCEEEEeccCCcEEEEECCCCccceEeecccccCCcceee-EEeeee-----eEEEEEecCCCceeeeeecCCCCCccee
Q 039692 48 NGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTGLSGTGI-VVNVTV-----AVVVAVSRSNGELVWSTQIDPRPRSQIT 121 (417)
Q Consensus 48 ~g~v~v~~~~g~l~ald~~tG~~~W~~~~~~~~~~~p~~~-v~~~~v-----~~l~ald~~tG~~~W~~~~~~~~~~~~~ 121 (417)
++.|++++.+ .|+.+|.++++.. ..... .......+ ..++.+ +.|+.+|.++++..--............
T Consensus 73 ~g~lWigT~~-Gl~~yd~~~~~f~--~~~~~-~~~~i~~i~~~~g~lWigt~~Gl~~~~~~~~~~~~~~~~~~~l~~~~i 148 (758)
T 3ott_A 73 NTYLYMGTDN-GILVYNYRADRYE--QPETD-FPTDVRTMALQGDTLWLGALNGLYTYQLQSRKLTSFDTRRNGLPNNTI 148 (758)
T ss_dssp TTEEEEEETT-EEEEEETTTTEEC--CCSCC-CCSCEEEEEEETTEEEEEETTEEEEEETTTCCEEEECHHHHCCSCSCE
T ss_pred CCcEEEEeCC-CeEEEeCCCCEEE--CcccC-CCceEEEEEecCCcEEEEcCCcceeEeCCCCeEEEeccCCCCcCCCeE
Confidence 6789999865 5899999887532 11110 00000001 122211 5688899877765321011000000011
Q ss_pred eceeEE-cCeEEEEeCCccCccccCcccCCCceEEEEeCCCCcee
Q 039692 122 MSGSVY-MGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRII 165 (417)
Q Consensus 122 ~sp~v~-~~~v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~~~ 165 (417)
.+-... ++.+++++. +.|+.+|+.+++..
T Consensus 149 ~~i~~d~~g~lWigt~---------------~Gl~~~~~~~~~~~ 178 (758)
T 3ott_A 149 YSIIRTKDNQIYVGTY---------------NGLCRYIPSNGKFE 178 (758)
T ss_dssp EEEEECTTCCEEEEET---------------TEEEEEETTTTEEE
T ss_pred EEEEEcCCCCEEEEeC---------------CCHhhCccCCCceE
Confidence 111122 678999885 36999999877643
No 233
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=83.41 E-value=31 Score=32.64 Aligned_cols=26 Identities=4% Similarity=-0.172 Sum_probs=16.5
Q ss_pred EEEEEc-ccceEEEEECCCCcEEEEee
Q 039692 286 VVVAVQ-KSGFAWAFDRDSGDIIWFKL 311 (417)
Q Consensus 286 ~v~~~~-~~G~l~ald~~tG~~lW~~~ 311 (417)
.||+.+ ..+.|..+|+.+|+.+-...
T Consensus 300 ~ly~td~~~~~V~~~~~~~G~~~~~i~ 326 (386)
T 3v65_B 300 SLYWTDWHTKSINSANKFTGKNQEIIR 326 (386)
T ss_dssp EEEEEETTTTEEEEEETTTCCSCEEEE
T ss_pred EEEEeeCCCCeEEEEECCCCcceEEEc
Confidence 455553 45778888877776654444
No 234
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=83.13 E-value=43 Score=35.36 Aligned_cols=27 Identities=15% Similarity=0.108 Sum_probs=18.8
Q ss_pred eeEEEEEc-ccceEEEEECCCCcEEEEe
Q 039692 284 RDVVVAVQ-KSGFAWAFDRDSGDIIWFK 310 (417)
Q Consensus 284 ~~~v~~~~-~~G~l~ald~~tG~~lW~~ 310 (417)
++.||+.+ ..+.|+.+|+.+|+.+-..
T Consensus 612 ~~~lYwtD~~~~~I~~~dk~tG~~~~~l 639 (791)
T 3m0c_C 612 EDKVFWTDIINEAIFSANRLTGSDVNLL 639 (791)
T ss_dssp TTEEEEEETTTTEEEEEETTTCCCCEEE
T ss_pred CCEEEEEECCCCEEEEEeCCCCcceEEe
Confidence 34677664 5678999999888665443
No 235
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=82.92 E-value=28 Score=31.79 Aligned_cols=28 Identities=14% Similarity=0.006 Sum_probs=22.3
Q ss_pred CEEEEeccCCcEEEEECCCCccceEeec
Q 039692 49 GVVYFPSWNGYLYAVNAFNGALIWEQNL 76 (417)
Q Consensus 49 g~v~v~~~~g~l~ald~~tG~~~W~~~~ 76 (417)
..++.++.++.|...|.++|+.+-++..
T Consensus 89 ~~l~s~s~D~~v~lwd~~~~~~~~~~~~ 116 (343)
T 2xzm_R 89 CFAISSSWDKTLRLWDLRTGTTYKRFVG 116 (343)
T ss_dssp TEEEEEETTSEEEEEETTSSCEEEEEEC
T ss_pred CEEEEEcCCCcEEEEECCCCcEEEEEcC
Confidence 4566777899999999999988766653
No 236
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=82.68 E-value=22 Score=36.90 Aligned_cols=27 Identities=15% Similarity=0.089 Sum_probs=19.0
Q ss_pred eEEEEEc-ccceEEEEECCCCcEEEEee
Q 039692 285 DVVVAVQ-KSGFAWAFDRDSGDIIWFKL 311 (417)
Q Consensus 285 ~~v~~~~-~~G~l~ald~~tG~~lW~~~ 311 (417)
+.||+.+ ..+.|+.+|+.+|+.+=...
T Consensus 595 ~~lywtd~~~~~V~~~d~~~G~~~~~i~ 622 (699)
T 1n7d_A 595 DKVFWTDIINEAIFSANRLTGSDVNLLA 622 (699)
T ss_dssp TEEEEECSTTTCEEEEETTTEEEEECCC
T ss_pred CEEEEEeCCCCeEEEEEccCCCceEEee
Confidence 3566664 46789999999998764443
No 237
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=82.37 E-value=22 Score=32.78 Aligned_cols=124 Identities=14% Similarity=0.108 Sum_probs=65.6
Q ss_pred ceeeeEEEeCCceeeCcEEE-CCEEEEecc---CC--cEEEEECCCCccc----eEeecccccCCcceeeEEe--e--ee
Q 039692 28 LRLRWSFYAGKDISATPAVA-NGVVYFPSW---NG--YLYAVNAFNGALI----WEQNLSKLTGLSGTGIVVN--V--TV 93 (417)
Q Consensus 28 ~~~~W~~~~~~~~~~~p~~~-~g~v~v~~~---~g--~l~ald~~tG~~~----W~~~~~~~~~~~p~~~v~~--~--~v 93 (417)
.+++-++. ......++. +|++|++.. ++ +|..++ +|+++ |....... ...|.++..+ + ++
T Consensus 9 ~~~v~~~~---~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~--~g~~~~~p~~~~~~~~~-~~~p~gv~~d~~g~L~v 82 (343)
T 2qe8_A 9 LEVVAELS---LAPGNITLTPDGRLFLSLHQFYQPEMQVAELT--QDGLIPFPPQSGNAIIT-FDTVLGIKSDGNGIVWM 82 (343)
T ss_dssp CEEEEEES---SCEEEEEECTTSCEEEEECGGGCCSCSEEEEE--TTEEEESCCCCSSCCCC-CSCEEEEEECSSSEEEE
T ss_pred eEEEEEcC---CCcceEEECCCCCEEEEeCCCCCCceEEEEEC--CCCeecCCCcccCcccc-eeEeeEEEEcCCCcEEE
Confidence 44454444 233344454 789998842 24 788888 67654 21110001 1234333221 2 11
Q ss_pred ----------eEEEEEecCCCceeeeeecCCCCC--cceeeceeEE--cCeEEEEeCCccCccccCcccCCCceEEEEeC
Q 039692 94 ----------AVVVAVSRSNGELVWSTQIDPRPR--SQITMSGSVY--MGAFYVGLSSLEEALPADQCCTFRGSLAKLDV 159 (417)
Q Consensus 94 ----------~~l~ald~~tG~~~W~~~~~~~~~--~~~~~sp~v~--~~~v~v~~~~~~~~~~~~~~~~~~g~l~ald~ 159 (417)
..|+.+|+++|+++-++.++.... .......++. ++.+|+...+.. .++.|+.+|.
T Consensus 83 ~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~----------~~~~i~v~d~ 152 (343)
T 2qe8_A 83 LDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPD----------DKAALIRVDL 152 (343)
T ss_dssp EECHHHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSG----------GGCEEEEEET
T ss_pred EcCCCCcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccC----------CCCeEEEEEC
Confidence 388899998998766666532211 0011122333 468888754110 1478999999
Q ss_pred CCCceecee
Q 039692 160 RNGRIIWQT 168 (417)
Q Consensus 160 ~tG~~~W~~ 168 (417)
++|+. |+.
T Consensus 153 ~~g~~-~r~ 160 (343)
T 2qe8_A 153 QTGLA-ARV 160 (343)
T ss_dssp TTCCE-EEE
T ss_pred CCCCE-EEE
Confidence 98874 654
No 238
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=81.51 E-value=37 Score=32.21 Aligned_cols=59 Identities=3% Similarity=0.034 Sum_probs=34.7
Q ss_pred eEEEEEcccceEEEEECCC-CcEEEEeecCCCCCCCcceeccc--ccCCeEEEE-eccCCceeeeecC
Q 039692 285 DVVVAVQKSGFAWAFDRDS-GDIIWFKLAGPGGREGGGVWGAA--TDGRRVYTN-IVNNDRIIWSTAD 348 (417)
Q Consensus 285 ~~v~~~~~~G~l~ald~~t-G~~lW~~~~~~~~~~g~~~~~~~--~~~~~vy~~-~~~~~~~~W~~~~ 348 (417)
.+++.++.+|.+..+|..+ ++.+-..... . .....+. .++..+++. ..++.-.+|....
T Consensus 291 ~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h----~-~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~ 353 (430)
T 2xyi_A 291 FILATGSADKTVALWDLRNLKLKLHSFESH----K-DEIFQVQWSPHNETILASSGTDRRLHVWDLSK 353 (430)
T ss_dssp TEEEEEETTSEEEEEETTCTTSCSEEEECC----S-SCEEEEEECSSCTTEEEEEETTSCCEEEEGGG
T ss_pred CEEEEEeCCCeEEEEeCCCCCCCeEEeecC----C-CCEEEEEECCCCCCEEEEEeCCCcEEEEeCCC
Confidence 4677788999999999988 4445444421 1 1122222 244444444 4455567888765
No 239
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=80.83 E-value=30 Score=37.44 Aligned_cols=94 Identities=12% Similarity=0.034 Sum_probs=51.0
Q ss_pred CCCCCCeEEEEECCCCceEEEecCCCCcceeeeccCCCCCCCCCCCCCCCccCCCceEEEEecCCeeeeEEEEEcc----
Q 039692 217 SDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQK---- 292 (417)
Q Consensus 217 ~~~~~~~l~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~p~v~~~~~~G~~~~~v~~~~~---- 292 (417)
....++.++.+|.++|+++-..+...... ..+. ...+| +.|+....
T Consensus 395 ~~~~~~~v~~~d~~tg~~~~~~~~~~~~v------------------------~~~~---~SpDG---~~la~~~~~~~~ 444 (1045)
T 1k32_A 395 VANDRFEIMTVDLETGKPTVIERSREAMI------------------------TDFT---ISDNS---RFIAYGFPLKHG 444 (1045)
T ss_dssp EEETTSEEEEEETTTCCEEEEEECSSSCC------------------------CCEE---ECTTS---CEEEEEEEECSS
T ss_pred EECCCCeEEEEECCCCceEEeccCCCCCc------------------------cceE---ECCCC---CeEEEEecCccc
Confidence 34456789999999998875543221110 1111 22344 23433333
Q ss_pred ------cceEEEEECCCCcEEEEeecCCCCCCCcceec--ccccCCeEEEEeccCCceeeee
Q 039692 293 ------SGFAWAFDRDSGDIIWFKLAGPGGREGGGVWG--AATDGRRVYTNIVNNDRIIWST 346 (417)
Q Consensus 293 ------~G~l~ald~~tG~~lW~~~~~~~~~~g~~~~~--~~~~~~~vy~~~~~~~~~~W~~ 346 (417)
++.++.+|.++|++. ... .. ...... ...++..+|..........|..
T Consensus 445 ~~~~~~~~~i~l~d~~~g~~~-~l~-~~----~~~~~~~~~spdG~~l~~~s~~~~~~~~~~ 500 (1045)
T 1k32_A 445 ETDGYVMQAIHVYDMEGRKIF-AAT-TE----NSHDYAPAFDADSKNLYYLSYRSLDPSPDR 500 (1045)
T ss_dssp TTCSCCEEEEEEEETTTTEEE-ECS-CS----SSBEEEEEECTTSCEEEEEESCCCCCEECS
T ss_pred cccCCCCCeEEEEECCCCcEE-Eee-CC----CcccCCceEcCCCCEEEEEecccCCcCcch
Confidence 258999999988732 221 11 111122 2346777888777666666653
No 240
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=80.43 E-value=25 Score=36.11 Aligned_cols=16 Identities=25% Similarity=0.422 Sum_probs=12.3
Q ss_pred CCeEEEEECCCCceEE
Q 039692 221 ANSIVALDIDSGRIAW 236 (417)
Q Consensus 221 ~~~l~ald~~tG~~~W 236 (417)
++.|+.+|.++|+.+-
T Consensus 171 ~~~i~~~d~~~g~~~~ 186 (741)
T 2ecf_A 171 GRNLWVIDLASGRQMQ 186 (741)
T ss_dssp TTEEEEEETTTTEEEE
T ss_pred CCcEEEEecCCCCEEE
Confidence 3579999998887653
No 241
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=80.35 E-value=55 Score=33.46 Aligned_cols=53 Identities=6% Similarity=0.121 Sum_probs=28.6
Q ss_pred cceEEEEECCCCcE-EEEeecCCCCCCCcceecccccCCeEEEEeccCC-ceeeeec
Q 039692 293 SGFAWAFDRDSGDI-IWFKLAGPGGREGGGVWGAATDGRRVYTNIVNND-RIIWSTA 347 (417)
Q Consensus 293 ~G~l~ald~~tG~~-lW~~~~~~~~~~g~~~~~~~~~~~~vy~~~~~~~-~~~W~~~ 347 (417)
++.|+.+|.++++. .|+.-+.+. .......++..++.+++....++ ..+|..+
T Consensus 294 ~~~l~~~d~~~~~~~~~~~l~~~~--~~~~l~~~~~~~~~lv~~~~~dg~~~l~~~~ 348 (695)
T 2bkl_A 294 RQRVFEVDPAKPARASWKEIVPED--SSASLLSVSIVGGHLSLEYLKDATSEVRVAT 348 (695)
T ss_dssp TCEEEEEBTTBCSGGGCEEEECCC--SSCEEEEEEEETTEEEEEEEETTEEEEEEEE
T ss_pred CCEEEEEeCCCCCccCCeEEecCC--CCCeEEEEEEECCEEEEEEEECCEEEEEEEe
Confidence 58999999988753 355544321 01112223344566665544443 5566655
No 242
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=80.30 E-value=38 Score=31.53 Aligned_cols=26 Identities=8% Similarity=-0.084 Sum_probs=15.7
Q ss_pred eEEEEEc-ccceEEEEECCCCcEEEEe
Q 039692 285 DVVVAVQ-KSGFAWAFDRDSGDIIWFK 310 (417)
Q Consensus 285 ~~v~~~~-~~G~l~ald~~tG~~lW~~ 310 (417)
+.||+.+ ..+.+..+|+.+|+.+=..
T Consensus 256 ~~ly~td~~~~~V~~~~~~~G~~~~~i 282 (349)
T 3v64_C 256 DSLYWTDWHTKSINSANKFTGKNQEII 282 (349)
T ss_dssp TEEEEEETTTTEEEEEETTTCCSCEEE
T ss_pred CEEEEecCCCCeEEEEEccCCCccEEe
Confidence 3455554 4567888887777654333
No 243
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=80.17 E-value=22 Score=32.72 Aligned_cols=101 Identities=11% Similarity=0.104 Sum_probs=0.0
Q ss_pred CCEEEEec--cCCcEEEEECCCCccceEeecccccCCcceeeEEeeeeeEEEEEecCCCceeeeeecCCCCCcceee---
Q 039692 48 NGVVYFPS--WNGYLYAVNAFNGALIWEQNLSKLTGLSGTGIVVNVTVAVVVAVSRSNGELVWSTQIDPRPRSQITM--- 122 (417)
Q Consensus 48 ~g~v~v~~--~~g~l~ald~~tG~~~W~~~~~~~~~~~p~~~v~~~~v~~l~ald~~tG~~~W~~~~~~~~~~~~~~--- 122 (417)
++.||++. ..+.|+.+++ +|+.+-..-...... |.++..+-.-+.||--|..++++ +.+..++.....+..
T Consensus 133 ~g~ly~td~~~~~~I~r~~~-dG~~~~~~~~~~l~~--Pnglavd~~~~~lY~aD~~~~~I-~~~d~dG~~~~~~~~~~~ 208 (318)
T 3sov_A 133 SGFMYWTDWGEVPKIERAGM-DGSSRFIIINSEIYW--PNGLTLDYEEQKLYWADAKLNFI-HKSNLDGTNRQAVVKGSL 208 (318)
T ss_dssp GTEEEEEECSSSCEEEEEET-TSCSCEEEECSSCSC--EEEEEEETTTTEEEEEETTTTEE-EEEETTSCSCEEEECSCC
T ss_pred CCEEEEEecCCCCEEEEEEc-CCCCeEEEEECCCCC--ccEEEEeccCCEEEEEECCCCEE-EEEcCCCCceEEEecCCC
Q ss_pred ----ceeEEcCeEEEEeCCccCccccCcccCCCceEEEEeCCCCcee
Q 039692 123 ----SGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRII 165 (417)
Q Consensus 123 ----sp~v~~~~v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~~~ 165 (417)
.-++.++.+|+.... .+.|+.+|+.+|+.+
T Consensus 209 ~~P~glav~~~~lywtd~~-------------~~~V~~~~~~~G~~~ 242 (318)
T 3sov_A 209 PHPFALTLFEDILYWTDWS-------------THSILACNKYTGEGL 242 (318)
T ss_dssp SCEEEEEEETTEEEEEETT-------------TTEEEEEETTTCCSC
T ss_pred CCceEEEEeCCEEEEEecC-------------CCeEEEEECCCCCce
No 244
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=80.10 E-value=44 Score=32.18 Aligned_cols=23 Identities=4% Similarity=-0.054 Sum_probs=19.0
Q ss_pred CCEEEEeccCCcEEEEECCCCcc
Q 039692 48 NGVVYFPSWNGYLYAVNAFNGAL 70 (417)
Q Consensus 48 ~g~v~v~~~~g~l~ald~~tG~~ 70 (417)
++.||+.+..+.|+.||++++++
T Consensus 149 ~g~Lyv~d~~~~I~~id~~~~~v 171 (430)
T 3tc9_A 149 HNHLYLVGEQHPTRLIDFEKEYV 171 (430)
T ss_dssp EEEEEEEEBTEEEEEEETTTTEE
T ss_pred CCeEEEEeCCCcEEEEECCCCEE
Confidence 47899998768999999987764
No 245
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=79.76 E-value=43 Score=31.86 Aligned_cols=104 Identities=13% Similarity=0.160 Sum_probs=53.2
Q ss_pred CCEEEEecc--CCcEEEEECCCCccceEeecccccCCcceeeEEeeee----------eEEEEEecCCCceeeeeecCCC
Q 039692 48 NGVVYFPSW--NGYLYAVNAFNGALIWEQNLSKLTGLSGTGIVVNVTV----------AVVVAVSRSNGELVWSTQIDPR 115 (417)
Q Consensus 48 ~g~v~v~~~--~g~l~ald~~tG~~~W~~~~~~~~~~~p~~~v~~~~v----------~~l~ald~~tG~~~W~~~~~~~ 115 (417)
++.||++.. .+.|+.+++ +|+.+=..-.... ..|.++..+-.- ..|+.+|. +|+.+..+-....
T Consensus 213 ~g~ly~td~~~~~~I~~~~~-dG~~~~~~~~~~l--~~P~glavd~~~~~lY~aD~~~~~I~~~d~-dG~~~~~~~~~~~ 288 (400)
T 3p5b_L 213 HGFMYWTDWGTPAKIKKGGL-NGVDIYSLVTENI--QWPNGITLDLLSGRLYWVDSKLHSISSIDV-NGGNRKTILEDEK 288 (400)
T ss_dssp TTEEEEEECSSSCCEEEEET-TSCSCEEEECSSC--SCEEEEEEETTTTEEEEEETTTTEEEEEET-TSCCCEEEEECSS
T ss_pred cCeEEEEeCCCCCEEEEEeC-CCCccEEEEECCC--CceEEEEEEeCCCEEEEEECCCCEEEEEeC-CCCccEEEEeCCC
Confidence 577888763 367888886 4543322211111 224443322111 45555553 2333322221110
Q ss_pred CCcceeeceeEEcCeEEEEeCCccCccccCcccCCCceEEEEeCCCCceeceee
Q 039692 116 PRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTY 169 (417)
Q Consensus 116 ~~~~~~~sp~v~~~~v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~~~W~~~ 169 (417)
. .....+-++.++.+|+.... .+.|+.+|+.+|+.+-...
T Consensus 289 ~-l~~P~gl~v~~~~lywtd~~-------------~~~V~~~~~~~G~~~~~i~ 328 (400)
T 3p5b_L 289 R-LAHPFSLAVFEDKVFWTDII-------------NEAIFSANRLTGSDVNLLA 328 (400)
T ss_dssp T-TSSEEEEEEETTEEEEEESS-------------SCSEEEEESSSCCCCEEEE
T ss_pred C-CCCCEEEEEeCCEEEEecCC-------------CCeEEEEEcCCCCceEEEe
Confidence 0 01122334678889987754 5789999998998775544
No 246
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=79.09 E-value=39 Score=30.99 Aligned_cols=24 Identities=8% Similarity=-0.110 Sum_probs=18.1
Q ss_pred CEEEEeccCCcEEEEECCCCccce
Q 039692 49 GVVYFPSWNGYLYAVNAFNGALIW 72 (417)
Q Consensus 49 g~v~v~~~~g~l~ald~~tG~~~W 72 (417)
..|++.+.++.|+.+|.++|+..-
T Consensus 93 ~~l~~~~~~~~l~~~d~~~~~~~~ 116 (396)
T 3c5m_A 93 RAFFYVKNELNLMKVDLETLEEQV 116 (396)
T ss_dssp SEEEEEETTTEEEEEETTTCCEEE
T ss_pred CEEEEEEcCCcEEEEECCCCCcEE
Confidence 367666667789999999887543
No 247
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=78.34 E-value=35 Score=35.39 Aligned_cols=58 Identities=17% Similarity=0.082 Sum_probs=30.1
Q ss_pred eEEEEE-cccceEEEEECCCCcEEEEeecCCCCCCCcceecccccCCeEEEEeccCCceeeee
Q 039692 285 DVVVAV-QKSGFAWAFDRDSGDIIWFKLAGPGGREGGGVWGAATDGRRVYTNIVNNDRIIWST 346 (417)
Q Consensus 285 ~~v~~~-~~~G~l~ald~~tG~~lW~~~~~~~~~~g~~~~~~~~~~~~vy~~~~~~~~~~W~~ 346 (417)
+.||++ ...++|+.+|.+...+ -..-.... ....-.+++++++.||+++...+ .++++
T Consensus 552 ~~LY~aD~~~~~I~~~d~dG~~~-~~~~~~~~--~~~~P~glavd~~~lywtd~~~~-~V~~~ 610 (699)
T 1n7d_A 552 GRLYWVDSKLHSISSIDVNGGNR-KTILEDEK--RLAHPFSLAVFEDKVFWTDIINE-AIFSA 610 (699)
T ss_dssp CCEEEEETTTTEEEEECSSSSCC-EEECCCSS--SCSSCCCCEEETTEEEEECSTTT-CEEEE
T ss_pred CEEEEEecCCCeEEEEccCCCce-EEEEecCC--cCCCceEeEEECCEEEEEeCCCC-eEEEE
Confidence 345655 4567888898764322 11111000 00122356678889999985444 33444
No 248
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=77.32 E-value=43 Score=30.51 Aligned_cols=130 Identities=13% Similarity=0.177 Sum_probs=0.0
Q ss_pred ccCccccccceeeeEEEeCCceeeCcEEE--CCEEEEeccC--CcEEEEECCCCccceEeecccccCCcceeeEEeeeee
Q 039692 19 LINPVTVRNLRLRWSFYAGKDISATPAVA--NGVVYFPSWN--GYLYAVNAFNGALIWEQNLSKLTGLSGTGIVVNVTVA 94 (417)
Q Consensus 19 ~i~~~~~~~~~~~W~~~~~~~~~~~p~~~--~g~v~v~~~~--g~l~ald~~tG~~~W~~~~~~~~~~~p~~~v~~~~v~ 94 (417)
.|...+.......-............++. ++.||+++.. +.|+.++. +|+.+=..-...... |.++..+-.-+
T Consensus 100 ~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~-dG~~~~~~~~~~~~~--P~gla~d~~~~ 176 (316)
T 1ijq_A 100 TVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGL-NGVDIYSLVTENIQW--PNGITLDLLSG 176 (316)
T ss_dssp EEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEET-TSCCEEEEECSSCSC--EEEEEEETTTT
T ss_pred EEEEEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcC-CCCCeEEEEECCCCC--ceEEEEeccCC
Q ss_pred EEEEEecCCCceeeeeecCCCCCcceee---------ceeEEcCeEEEEeCCccCccccCcccCCCceEEEEeCCCCcee
Q 039692 95 VVVAVSRSNGELVWSTQIDPRPRSQITM---------SGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRII 165 (417)
Q Consensus 95 ~l~ald~~tG~~~W~~~~~~~~~~~~~~---------sp~v~~~~v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~~~ 165 (417)
.||.-|..++++ +.+..++.....+.. .-++.++.+|+.... .+.|+.+|+.+|+.+
T Consensus 177 ~lY~~D~~~~~I-~~~d~dg~~~~~~~~~~~~~~~P~giav~~~~ly~~d~~-------------~~~V~~~~~~~g~~~ 242 (316)
T 1ijq_A 177 RLYWVDSKLHSI-SSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDII-------------NEAIFSANRLTGSDV 242 (316)
T ss_dssp EEEEEETTTTEE-EEEETTSCSCEEEEECTTTTSSEEEEEEETTEEEEEETT-------------TTEEEEEETTTCCCC
T ss_pred EEEEEECCCCeE-EEEecCCCceEEEeecCCccCCcEEEEEECCEEEEEECC-------------CCeEEEEeCCCCcce
No 249
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=77.02 E-value=40 Score=30.07 Aligned_cols=25 Identities=8% Similarity=0.230 Sum_probs=18.8
Q ss_pred cCeEEEEeCCccCccccCcccCCCceEEEEeCCCCceece
Q 039692 128 MGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQ 167 (417)
Q Consensus 128 ~~~v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~~~W~ 167 (417)
++.++++.. ..|+.+|+++|+....
T Consensus 64 dG~l~v~~~---------------~~l~~~d~~~g~~~~~ 88 (297)
T 3g4e_A 64 SGGYVATIG---------------TKFCALNWKEQSAVVL 88 (297)
T ss_dssp TSSEEEEET---------------TEEEEEETTTTEEEEE
T ss_pred CCCEEEEEC---------------CeEEEEECCCCcEEEE
Confidence 566887763 5799999998886543
No 250
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=76.46 E-value=13 Score=33.00 Aligned_cols=23 Identities=9% Similarity=0.030 Sum_probs=17.0
Q ss_pred EEEEcccceEEEEECCCCcEEEEee
Q 039692 287 VVAVQKSGFAWAFDRDSGDIIWFKL 311 (417)
Q Consensus 287 v~~~~~~G~l~ald~~tG~~lW~~~ 311 (417)
+++.+.+|.|++++ +|++.+...
T Consensus 186 ~l~f~~~G~l~~v~--~g~~Y~~~~ 208 (236)
T 1tl2_A 186 FLFFSSVGTLFGVQ--GGKFYEDYP 208 (236)
T ss_dssp EEEECTTSCEEEEE--TTEEEEESC
T ss_pred EEEECCCCcEEEEe--CCeEEecCC
Confidence 44578899999999 776666543
No 251
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=75.82 E-value=38 Score=29.16 Aligned_cols=54 Identities=11% Similarity=-0.010 Sum_probs=31.5
Q ss_pred eeEEEEEecCCCceeeeeecCCCCCcceeeceeEEcCe-EEEEeCCccCccccCcccCCCceEEEEeCCC-Ccee
Q 039692 93 VAVVVAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGA-FYVGLSSLEEALPADQCCTFRGSLAKLDVRN-GRII 165 (417)
Q Consensus 93 v~~l~ald~~tG~~~W~~~~~~~~~~~~~~sp~v~~~~-v~v~~~~~~~~~~~~~~~~~~g~l~ald~~t-G~~~ 165 (417)
.+.|+.+|..+|++......... ...+..+| ++. ++++. ++.|+.+|.++ |+..
T Consensus 21 ~~~i~~~d~~~~~~~~~~~~~~~-v~~~~~sp---dg~~l~~~~---------------~~~i~~~d~~~~~~~~ 76 (297)
T 2ojh_A 21 RSSIEIFNIRTRKMRVVWQTPEL-FEAPNWSP---DGKYLLLNS---------------EGLLYRLSLAGDPSPE 76 (297)
T ss_dssp CEEEEEEETTTTEEEEEEEESSC-CEEEEECT---TSSEEEEEE---------------TTEEEEEESSSCCSCE
T ss_pred ceeEEEEeCCCCceeeeccCCcc-eEeeEECC---CCCEEEEEc---------------CCeEEEEeCCCCCCce
Confidence 36778888888877644443221 11223333 444 44433 37899999998 7654
No 252
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=75.75 E-value=59 Score=31.32 Aligned_cols=23 Identities=13% Similarity=0.088 Sum_probs=19.9
Q ss_pred CEEEEeccCCcEEEEECCCCccc
Q 039692 49 GVVYFPSWNGYLYAVNAFNGALI 71 (417)
Q Consensus 49 g~v~v~~~~g~l~ald~~tG~~~ 71 (417)
+.||+++..+.|+.||+++|++.
T Consensus 153 g~Lyv~D~~~~I~~id~~~g~v~ 175 (433)
T 4hw6_A 153 DDLYWVGQRDAFRHVDFVNQYVD 175 (433)
T ss_dssp CEEEEECBTSCEEEEETTTTEEE
T ss_pred CEEEEEeCCCCEEEEECCCCEEE
Confidence 89999987689999999888764
No 253
>1xd5_A Gastrodianin-1, antifungal protein GAFP-1; monocot mannose binding lectin, monomer, homogeneous beta- sheet; 2.00A {Gastrodia elata} SCOP: b.78.1.1 PDB: 1xd6_A
Probab=75.72 E-value=17 Score=27.77 Aligned_cols=52 Identities=21% Similarity=0.355 Sum_probs=29.5
Q ss_pred EcccceEEEEECCCCcEEEEeecCCCCCCCcceecccccCCeEEEEeccCCceeeeec
Q 039692 290 VQKSGFAWAFDRDSGDIIWFKLAGPGGREGGGVWGAATDGRRVYTNIVNNDRIIWSTA 347 (417)
Q Consensus 290 ~~~~G~l~ald~~tG~~lW~~~~~~~~~~g~~~~~~~~~~~~vy~~~~~~~~~~W~~~ 347 (417)
-..+|.|+..| +++.+|+....+. .+. .....-+++.+.+-+ ...+.+|+..
T Consensus 56 l~~~GNLvl~d--~~~~~W~S~~~~~--~g~-~~l~l~~dGnlvl~~-~~~~~~W~S~ 107 (112)
T 1xd5_A 56 MQNDGNLVIYS--GSRAIWASNTNRQ--NGN-YYLILQRDRNVVIYD-NSNNAIWATH 107 (112)
T ss_dssp ECTTSCEEEEE--TTEEEEECCCCCS--CCC-CEEEECTTSCEEEEC-TTSCEEEECC
T ss_pred EeCCCCEEEEc--CCEEEEECCccCC--CCC-EEEEEeCCCcEEEEC-CCCceEEECC
Confidence 34688888888 6789999775432 111 111122344444433 3467888754
No 254
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=75.43 E-value=49 Score=30.34 Aligned_cols=29 Identities=24% Similarity=0.219 Sum_probs=22.1
Q ss_pred EEE--CCEEEEecc----CCcEEEEECCCCccceEe
Q 039692 45 AVA--NGVVYFPSW----NGYLYAVNAFNGALIWEQ 74 (417)
Q Consensus 45 ~~~--~g~v~v~~~----~g~l~ald~~tG~~~W~~ 74 (417)
++. ++.+|+++. ++.|+.+|.++|+. |+.
T Consensus 126 ~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~-~r~ 160 (343)
T 2qe8_A 126 AVDLIHNFVYISDPAPDDKAALIRVDLQTGLA-ARV 160 (343)
T ss_dssp EEETTTTEEEEEECCSGGGCEEEEEETTTCCE-EEE
T ss_pred EEecCCCEEEEEcCccCCCCeEEEEECCCCCE-EEE
Confidence 455 479999864 67899999988874 664
No 255
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=74.57 E-value=52 Score=30.11 Aligned_cols=20 Identities=10% Similarity=0.097 Sum_probs=14.6
Q ss_pred ccceEEEEECCCCcEEEEee
Q 039692 292 KSGFAWAFDRDSGDIIWFKL 311 (417)
Q Consensus 292 ~~G~l~ald~~tG~~lW~~~ 311 (417)
.+..|+.+|.++|+......
T Consensus 166 ~~~~l~~~d~~~g~~~~~~~ 185 (396)
T 3c5m_A 166 PTCRLIKVDIETGELEVIHQ 185 (396)
T ss_dssp CCEEEEEEETTTCCEEEEEE
T ss_pred CcceEEEEECCCCcEEeecc
Confidence 45689999999988765443
No 256
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=74.12 E-value=48 Score=29.55 Aligned_cols=41 Identities=10% Similarity=0.061 Sum_probs=23.8
Q ss_pred ceEEEEECCCCcEEEEeecCCCCCCCcceecccccCCeEEEEecc
Q 039692 294 GFAWAFDRDSGDIIWFKLAGPGGREGGGVWGAATDGRRVYTNIVN 338 (417)
Q Consensus 294 G~l~ald~~tG~~lW~~~~~~~~~~g~~~~~~~~~~~~vy~~~~~ 338 (417)
..++++|..+. .|+.-...+ ........++.++.+|+....
T Consensus 173 ~~~~~yd~~~~--~W~~~~~~p--~~r~~~~~~~~~~~iyv~GG~ 213 (302)
T 2xn4_A 173 STVECYNATTN--EWTYIAEMS--TRRSGAGVGVLNNLLYAVGGH 213 (302)
T ss_dssp CCEEEEETTTT--EEEEECCCS--SCCBSCEEEEETTEEEEECCB
T ss_pred cEEEEEeCCCC--cEEECCCCc--cccccccEEEECCEEEEECCC
Confidence 35889998766 577653211 112222344567888888543
No 257
>3mez_B Mannose-specific lectin 3 chain 2; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0
Probab=73.83 E-value=21 Score=27.45 Aligned_cols=22 Identities=14% Similarity=0.045 Sum_probs=16.3
Q ss_pred EcccceEEEEECCCCcEEEEeec
Q 039692 290 VQKSGFAWAFDRDSGDIIWFKLA 312 (417)
Q Consensus 290 ~~~~G~l~ald~~tG~~lW~~~~ 312 (417)
-..+|.|+.+|. +|+.+|+...
T Consensus 63 l~~dGNLVl~d~-~~~~iW~S~t 84 (113)
T 3mez_B 63 LGHSGELDITDD-RLNTVFVSNT 84 (113)
T ss_dssp ECTTSCEEEECT-TSCEEEECSC
T ss_pred EeCCCcEEEECC-CCCEEEECCC
Confidence 346788888874 5788998875
No 258
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=73.41 E-value=1e+02 Score=32.88 Aligned_cols=151 Identities=10% Similarity=0.056 Sum_probs=77.5
Q ss_pred eEEEEEecCCCceeeeeecCCCCCcceeeceeEEcCeEEEEeCCccCccccCcccCCCceEEEEeCCCCceeceeeecCC
Q 039692 94 AVVVAVSRSNGELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYMLPD 173 (417)
Q Consensus 94 ~~l~ald~~tG~~~W~~~~~~~~~~~~~~sp~v~~~~v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~~~W~~~~~~~ 173 (417)
+.++.+|..+++.+-...-. .....+..+| +..++.+.. ++.|...|.++|+.+-++... .
T Consensus 39 g~I~lw~~~~~~~~~~~~~~-~~V~~l~fsp---g~~L~S~s~--------------D~~v~lWd~~~~~~~~~~~~~-~ 99 (902)
T 2oaj_A 39 GEVHIYGQQQVEVVIKLEDR-SAIKEMRFVK---GIYLVVINA--------------KDTVYVLSLYSQKVLTTVFVP-G 99 (902)
T ss_dssp SEEEEECSTTCEEEEECSSC-CCEEEEEEET---TTEEEEEET--------------TCEEEEEETTTCSEEEEEECS-S
T ss_pred CEEEEEeCCCcEEEEEcCCC-CCEEEEEEcC---CCEEEEEEC--------------cCeEEEEECCCCcEEEEEcCC-C
Confidence 56667776666654433211 1111122233 444555544 689999999999988666421 0
Q ss_pred CCCCCCCCCCccccCCCceeecccCcccCCCCCCCCCCCCcccCCCCCCeEEEEECCCCceEEEecCCCCcceeeeccCC
Q 039692 174 NGGKRGGYSGAAVWGSSPAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVP 253 (417)
Q Consensus 174 ~~~~~~~~~gg~~~~~~pa~d~~~~~~~~~~~~~p~~~~~~v~~~~~~~~l~ald~~tG~~~W~~~~~~~~~~~~~~~~~ 253 (417)
.+. ..++++. ...++.+..++.+..+|.++++.. .+.... .|....
T Consensus 100 -----------~V~--~v~~sp~---------------g~~l~sgs~dg~V~lwd~~~~~~~-~~~i~~--~~~~~~--- 145 (902)
T 2oaj_A 100 -----------KIT--SIDTDAS---------------LDWMLIGLQNGSMIVYDIDRDQLS-SFKLDN--LQKSSF--- 145 (902)
T ss_dssp -----------CEE--EEECCTT---------------CSEEEEEETTSCEEEEETTTTEEE-EEEECC--HHHHHT---
T ss_pred -----------CEE--EEEECCC---------------CCEEEEEcCCCcEEEEECCCCccc-cceecc--cccccc---
Confidence 010 1122221 223455667889999999988864 111100 000000
Q ss_pred CCCCCCCCCCCCCccCCCceE-EEEecCCeeeeEEEEEcccceEEEEECCCCcEEEEee
Q 039692 254 NNPDCPPGPNLDADFGEAPML-LTISTNGRFRDVVVAVQKSGFAWAFDRDSGDIIWFKL 311 (417)
Q Consensus 254 ~~~~c~~~~~~~~~~~~~p~v-~~~~~~G~~~~~v~~~~~~G~l~ald~~tG~~lW~~~ 311 (417)
.......++. .....++ ...++++..+|.+ ..|.++++.+-...
T Consensus 146 -----------~~~~h~~~V~sl~~sp~~--~~~l~~g~~dg~v-lWd~~~~~~~~~~~ 190 (902)
T 2oaj_A 146 -----------FPAARLSPIVSIQWNPRD--IGTVLISYEYVTL-TYSLVENEIKQSFI 190 (902)
T ss_dssp -----------CSSSCCCCCCEEEEETTE--EEEEEEECSSCEE-EEETTTTEEEEEEC
T ss_pred -----------ccccCCCCeEEEEEccCC--CCEEEEEeCCCcE-EEECCCCceEEEEe
Confidence 0000011111 1111111 3577788899999 99999998776554
No 259
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=73.33 E-value=54 Score=29.78 Aligned_cols=15 Identities=27% Similarity=0.426 Sum_probs=12.0
Q ss_pred CceEEEEeCCCCcee
Q 039692 151 RGSLAKLDVRNGRII 165 (417)
Q Consensus 151 ~g~l~ald~~tG~~~ 165 (417)
.+.|+.+|+++|+..
T Consensus 70 ~~~i~~~d~~~~~~~ 84 (326)
T 2ghs_A 70 ERELHELHLASGRKT 84 (326)
T ss_dssp GTEEEEEETTTTEEE
T ss_pred CCEEEEEECCCCcEE
Confidence 478999999988653
No 260
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=73.24 E-value=13 Score=32.98 Aligned_cols=20 Identities=10% Similarity=0.194 Sum_probs=13.7
Q ss_pred CCCCeEEEEECCCCceEEEecC
Q 039692 219 IYANSIVALDIDSGRIAWAKPL 240 (417)
Q Consensus 219 ~~~~~l~ald~~tG~~~W~~~~ 240 (417)
..++.|++++ .|++.+..+.
T Consensus 190 ~~~G~l~~v~--~g~~Y~~~~p 209 (236)
T 1tl2_A 190 SSVGTLFGVQ--GGKFYEDYPP 209 (236)
T ss_dssp CTTSCEEEEE--TTEEEEESCC
T ss_pred CCCCcEEEEe--CCeEEecCCc
Confidence 4568888888 7776665443
No 261
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=73.20 E-value=53 Score=29.61 Aligned_cols=119 Identities=17% Similarity=0.201 Sum_probs=62.1
Q ss_pred cEEECCEEEEecc-------CCcEEEEECCCCccceEeecccc--cCCcceee------EEee-----eeeEEEEEecCC
Q 039692 44 PAVANGVVYFPSW-------NGYLYAVNAFNGALIWEQNLSKL--TGLSGTGI------VVNV-----TVAVVVAVSRSN 103 (417)
Q Consensus 44 p~~~~g~v~v~~~-------~g~l~ald~~tG~~~W~~~~~~~--~~~~p~~~------v~~~-----~v~~l~ald~~t 103 (417)
.++.+++||+... ...++.+|.++. .|+.-...+ .....+.+ +..| ....++++|.++
T Consensus 154 ~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~--~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~ 231 (318)
T 2woz_A 154 VISHNGMIYCLGGKTDDKKCTNRVFIYNPKKG--DWKDLAPMKTPRSMFGVAIHKGKIVIAGGVTEDGLSASVEAFDLKT 231 (318)
T ss_dssp EEEETTEEEEECCEESSSCBCCCEEEEETTTT--EEEEECCCSSCCBSCEEEEETTEEEEEEEEETTEEEEEEEEEETTT
T ss_pred EEEECCEEEEEcCCCCCCCccceEEEEcCCCC--EEEECCCCCCCcccceEEEECCEEEEEcCcCCCCccceEEEEECCC
Confidence 3457999997653 246999998765 588654321 11111111 1122 126788999877
Q ss_pred CceeeeeecCCCCCcceeeceeEEcCeEEEEeCCccCccccC-cccCCCceEEEEeCCCCceeceee
Q 039692 104 GELVWSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPAD-QCCTFRGSLAKLDVRNGRIIWQTY 169 (417)
Q Consensus 104 G~~~W~~~~~~~~~~~~~~sp~v~~~~v~v~~~~~~~~~~~~-~~~~~~g~l~ald~~tG~~~W~~~ 169 (417)
. .|+.-.. .+......+-++.++.+|+............ ........++++|+++. .|+.-
T Consensus 232 ~--~W~~~~~-~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~--~W~~~ 293 (318)
T 2woz_A 232 N--KWEVMTE-FPQERSSISLVSLAGSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDKK--EWAGM 293 (318)
T ss_dssp C--CEEECCC-CSSCCBSCEEEEETTEEEEECCBCCBC----CCBCCBCCCEEEEETTTT--EEEEE
T ss_pred C--eEEECCC-CCCcccceEEEEECCEEEEECCeeccCCCCceeccceeeeEEEEeCCCC--Eehhh
Confidence 6 4876522 1111222344567888887543211000000 00011357999999764 58754
No 262
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=71.93 E-value=61 Score=29.79 Aligned_cols=23 Identities=4% Similarity=-0.002 Sum_probs=17.8
Q ss_pred CEEEEeccCCcEEEEECC-CCccce
Q 039692 49 GVVYFPSWNGYLYAVNAF-NGALIW 72 (417)
Q Consensus 49 g~v~v~~~~g~l~ald~~-tG~~~W 72 (417)
..+|+++.+ .+..+|.+ +|++.-
T Consensus 52 ~~l~~~~~~-~v~~~~~~~~g~~~~ 75 (365)
T 1jof_A 52 KNIYGAAMK-KWSSFAVKSPTEIVH 75 (365)
T ss_dssp SEEEEEEBT-EEEEEEEEETTEEEE
T ss_pred CEEEEEccc-eEEEEEECCCCCEEE
Confidence 368888776 89999987 888754
No 263
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=71.62 E-value=60 Score=29.59 Aligned_cols=104 Identities=17% Similarity=0.168 Sum_probs=55.1
Q ss_pred EECCEEEEec--cCCcEEEEECCCCccceEeecccccCCccee--eEE-eee-------------eeEEEEEecCCCcee
Q 039692 46 VANGVVYFPS--WNGYLYAVNAFNGALIWEQNLSKLTGLSGTG--IVV-NVT-------------VAVVVAVSRSNGELV 107 (417)
Q Consensus 46 ~~~g~v~v~~--~~g~l~ald~~tG~~~W~~~~~~~~~~~p~~--~v~-~~~-------------v~~l~ald~~tG~~~ 107 (417)
..++.||+.+ .++.||.++. +|...-+..........+.+ ++. ... -..||.++.+.+ ..
T Consensus 23 ~~g~~iy~~n~~d~~~ly~~~~-dg~~~~~l~~~~~~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~-~~ 100 (302)
T 3s25_A 23 ESDGEVFFSNTNDNGRLYAMNI-DGSNIHKLSNDTAMYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGH-GS 100 (302)
T ss_dssp EETTEEEEEEGGGTTEEEEEET-TSCSCEEEEEEEEEEEEECSSEEEEEEECC------CCSSCCSEEEEEEETTSC-CC
T ss_pred EeCCEEEEEeCCCCceEEEEcC-CCCCCEEccCCceeeEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCCC-cc
Confidence 5688999986 3678999997 67766666554321111111 000 000 146677775433 33
Q ss_pred eeeecCCCCCcceeeceeEEcCeEEEEeCCccCccccCcccCCCceEEEEeCCCCceecee
Q 039692 108 WSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQT 168 (417)
Q Consensus 108 W~~~~~~~~~~~~~~sp~v~~~~v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~~~W~~ 168 (417)
.+..-. ......+.++.||+...... ....|+.++.+ |+.+-+.
T Consensus 101 ~~l~~~------~~~~~s~~g~~Iy~~~~~~~----------~~~~Iy~~~~d-Gs~~~~l 144 (302)
T 3s25_A 101 TVLDPD------PCIYASLIGNYIYYLHYDTQ----------TATSLYRIRID-GEEKKKI 144 (302)
T ss_dssp EEEECS------CEEEEEEETTEEEEEEESSS----------SCEEEEEEETT-SCCCEEE
T ss_pred eEeecC------CccEEEEeCCEEEEEeecCC----------CCceEEEEECC-CCCeEEE
Confidence 333211 11123356888887651000 14689999986 6655443
No 264
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=71.51 E-value=63 Score=29.72 Aligned_cols=61 Identities=10% Similarity=0.190 Sum_probs=31.4
Q ss_pred EecCCeeeeEEEEEc-ccceEEEEECC-CCcEEEEeecC-CCCCCCcceecccccCCeEEEEeccCC
Q 039692 277 ISTNGRFRDVVVAVQ-KSGFAWAFDRD-SGDIIWFKLAG-PGGREGGGVWGAATDGRRVYTNIVNND 340 (417)
Q Consensus 277 ~~~~G~~~~~v~~~~-~~G~l~ald~~-tG~~lW~~~~~-~~~~~g~~~~~~~~~~~~vy~~~~~~~ 340 (417)
+..+| +.+|+++ .++.++.+|.+ +|++.-..... +....+........+++.+|+.+..++
T Consensus 152 ~spdG---~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~ 215 (365)
T 1jof_A 152 FDPTE---TYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGN 215 (365)
T ss_dssp ECTTS---SEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTT
T ss_pred ECCCC---CEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCC
Confidence 34455 3567665 35789999998 88864322221 000011111223345667777765433
No 265
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=69.98 E-value=67 Score=29.41 Aligned_cols=70 Identities=10% Similarity=0.139 Sum_probs=38.4
Q ss_pred eEEEEEecCCCceeeeeecCCCC-CcceeeceeEEcCeEEEEeCCccCccccCcccCCCceEEEEeCCCCceeceee
Q 039692 94 AVVVAVSRSNGELVWSTQIDPRP-RSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTY 169 (417)
Q Consensus 94 ~~l~ald~~tG~~~W~~~~~~~~-~~~~~~sp~v~~~~v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~~~W~~~ 169 (417)
..++++|..+.+..|+.-.+ .+ ......+-++.++.||+......... ........++++|+.+. .|+.-
T Consensus 31 ~~~~~~d~~~~~~~W~~~~~-~p~~~R~~~~~~~~~~~lyv~GG~~~~~~---~~~~~~~~v~~yd~~~~--~W~~~ 101 (357)
T 2uvk_A 31 TAWYKLDTQAKDKKWTALAA-FPGGPRDQATSAFIDGNLYVFGGIGKNSE---GLTQVFNDVHKYNPKTN--SWVKL 101 (357)
T ss_dssp TCEEEEETTSSSCCEEECCC-CTTCCCBSCEEEEETTEEEEECCEEECTT---SCEEECCCEEEEETTTT--EEEEC
T ss_pred CeEEEEccccCCCCeeECCC-CCCCcCccceEEEECCEEEEEcCCCCCCC---ccceeeccEEEEeCCCC--cEEEC
Confidence 46788998776678986532 11 12223344567889887543200000 00011357999999865 48753
No 266
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=69.97 E-value=52 Score=28.21 Aligned_cols=51 Identities=16% Similarity=0.246 Sum_probs=28.2
Q ss_pred cCccccccceeeeEEEeCCceeeCcEEE-CCEEEEeccCCcEEEEECCC-Cccc
Q 039692 20 INPVTVRNLRLRWSFYAGKDISATPAVA-NGVVYFPSWNGYLYAVNAFN-GALI 71 (417)
Q Consensus 20 i~~~~~~~~~~~W~~~~~~~~~~~p~~~-~g~v~v~~~~g~l~ald~~t-G~~~ 71 (417)
|...+..++++.-.......+. .+... ++..++...++.|+.+|.++ |+..
T Consensus 24 i~~~d~~~~~~~~~~~~~~~v~-~~~~spdg~~l~~~~~~~i~~~d~~~~~~~~ 76 (297)
T 2ojh_A 24 IEIFNIRTRKMRVVWQTPELFE-APNWSPDGKYLLLNSEGLLYRLSLAGDPSPE 76 (297)
T ss_dssp EEEEETTTTEEEEEEEESSCCE-EEEECTTSSEEEEEETTEEEEEESSSCCSCE
T ss_pred EEEEeCCCCceeeeccCCcceE-eeEECCCCCEEEEEcCCeEEEEeCCCCCCce
Confidence 4444555555553343333332 22332 45444444578999999988 7764
No 267
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=69.37 E-value=73 Score=29.67 Aligned_cols=56 Identities=9% Similarity=-0.006 Sum_probs=33.6
Q ss_pred EEEEEcccceEEEEECCCCcEEEEeecCCCCCCCcceeccc--ccCCeEEEEeccCCceeeeec
Q 039692 286 VVVAVQKSGFAWAFDRDSGDIIWFKLAGPGGREGGGVWGAA--TDGRRVYTNIVNNDRIIWSTA 347 (417)
Q Consensus 286 ~v~~~~~~G~l~ald~~tG~~lW~~~~~~~~~~g~~~~~~~--~~~~~vy~~~~~~~~~~W~~~ 347 (417)
.+..++.||.++..|..+|+.+-...... .....++ .+++ ..+...+++-.+|+..
T Consensus 331 ~~~sgs~Dg~V~lwd~~~~~~~~~~~~~~-----~~V~svafspdG~-~LA~as~~Gv~lvrL~ 388 (393)
T 4gq1_A 331 FATAHSQHGLIQLINTYEKDSNSIPIQLG-----MPIVDFCWHQDGS-HLAIATEGSVLLTRLM 388 (393)
T ss_dssp EEEEETTTTEEEEEETTCTTCCEEEEECS-----SCEEEEEECTTSS-EEEEEESSEEEEEEEG
T ss_pred EEEEECCCCEEEEEECCCCcEEEEecCCC-----CcEEEEEEcCCCC-EEEEEeCCCeEEEEEe
Confidence 45556789999999999998765543211 1122222 2444 4455556677777653
No 268
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=68.73 E-value=1e+02 Score=31.36 Aligned_cols=143 Identities=10% Similarity=-0.033 Sum_probs=0.0
Q ss_pred CCEEEEec-cCCcEEEEECCCCccceEeecccccCCcceeeEEeeeeeEEEEEecCCCceeeeeecCCC-------CCcc
Q 039692 48 NGVVYFPS-WNGYLYAVNAFNGALIWEQNLSKLTGLSGTGIVVNVTVAVVVAVSRSNGELVWSTQIDPR-------PRSQ 119 (417)
Q Consensus 48 ~g~v~v~~-~~g~l~ald~~tG~~~W~~~~~~~~~~~p~~~v~~~~v~~l~ald~~tG~~~W~~~~~~~-------~~~~ 119 (417)
++.||+++ ..+.|..+|+ +|+.+=..-...... |.+++.+..-+.||--|....-.+|+..+++. ....
T Consensus 95 ~~~ly~~d~~~~~I~v~~~-dG~~~~~l~~~~l~~--P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~~~l~~~~~~ 171 (619)
T 3s94_A 95 GEKLYWTDSETNRIEVSNL-DGSLRKVLFWQELDQ--PRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIY 171 (619)
T ss_dssp TTEEEEEETTTTEEEEEET-TSCSCEEEECSSCSC--CCCEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCS
T ss_pred CCEEEEEeCCCCEEEEEEC-CCCCEEEEEeCCCCC--CceEEEecCCCeEEEeccCCCCEEEEEECCCCceEEEEeCCCC
Q ss_pred eeeceeEE--cCeEEEEeCCccCccccCcccCCCceEEEEeCCCCceeceeeecCCCCCCCCCCCCccccCCCceeeccc
Q 039692 120 ITMSGSVY--MGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGGYSGAAVWGSSPAIDVIR 197 (417)
Q Consensus 120 ~~~sp~v~--~~~v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~~gg~~~~~~pa~d~~~ 197 (417)
....-++. +++||+.-.. .+.|..+|.+ |..+..+-....... ...+++++.
T Consensus 172 ~P~Glald~~~~~LY~aD~~-------------~~~I~~~~~d-G~~~~~~~~~~~~~P------------~gi~~~~~~ 225 (619)
T 3s94_A 172 WPNGLTLDYEEQKLYWADAK-------------LNFIHKSNLD-GTNRQAVVKGSLPHP------------FALTLFEDI 225 (619)
T ss_dssp SEEEEEEETTTTEEEEEETT-------------TCCEEEESSS-CCEEC---------C------------CCEEESSSE
T ss_pred CCcEEEEEccCCEEEEEeCC-------------CCeEEEecCC-CCccEEEEeCCCCCc------------eEEEEeCCE
Q ss_pred CcccCCCCCCCCCCCCcccCCCCCCeEEEEECCCCceE
Q 039692 198 RQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIA 235 (417)
Q Consensus 198 ~~~~~~~~~~p~~~~~~v~~~~~~~~l~ald~~tG~~~ 235 (417)
.+ ......+.|..+|+.+|+.+
T Consensus 226 ly----------------~td~~~~~V~~~d~~tg~~~ 247 (619)
T 3s94_A 226 LY----------------WTDWSTHSILACNKYTGEGL 247 (619)
T ss_dssp EE----------------EECTTTCSEEEEESSSCCCC
T ss_pred EE----------------EecCCCCEEEEEECCCCccc
No 269
>3a0c_A Mannose/sialic acid-binding lectin; beta-prism II, sugar binding protein; 2.00A {Polygonatum cyrtonema} PDB: 3a0d_A* 3a0e_A*
Probab=68.63 E-value=31 Score=26.24 Aligned_cols=22 Identities=23% Similarity=0.502 Sum_probs=17.1
Q ss_pred cccceEEEEECCCCcEEEEeecC
Q 039692 291 QKSGFAWAFDRDSGDIIWFKLAG 313 (417)
Q Consensus 291 ~~~G~l~ald~~tG~~lW~~~~~ 313 (417)
..+|.|+..|. +|+.+|+....
T Consensus 58 ~~dGNLVl~~~-~~~~~W~S~t~ 79 (110)
T 3a0c_A 58 HNNGNLVIYDQ-SNRVIWQTKTN 79 (110)
T ss_dssp CTTSCEEEECT-TCCEEEECCCC
T ss_pred eCCCCEEEECC-CCcEEEecCCC
Confidence 46788888885 68999998764
No 270
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=66.53 E-value=77 Score=28.81 Aligned_cols=25 Identities=4% Similarity=-0.130 Sum_probs=17.8
Q ss_pred CEEEEeccCCcEEEEECCCCccceE
Q 039692 49 GVVYFPSWNGYLYAVNAFNGALIWE 73 (417)
Q Consensus 49 g~v~v~~~~g~l~ald~~tG~~~W~ 73 (417)
..|..++.++.|...|.++++..-+
T Consensus 29 ~~las~~~D~~i~iw~~~~~~~~~~ 53 (345)
T 3fm0_A 29 TLLASCGGDRRIRIWGTEGDSWICK 53 (345)
T ss_dssp SCEEEEETTSCEEEEEEETTEEEEE
T ss_pred CEEEEEcCCCeEEEEEcCCCcceee
Confidence 3566677889999999887764433
No 271
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=66.13 E-value=71 Score=28.26 Aligned_cols=63 Identities=14% Similarity=0.185 Sum_probs=36.4
Q ss_pred eEEEEEcccceEEEEECCCCcEEEEeecCC-CCCCCcceeccc--ccCCeEEEEeccCCceeeeecC
Q 039692 285 DVVVAVQKSGFAWAFDRDSGDIIWFKLAGP-GGREGGGVWGAA--TDGRRVYTNIVNNDRIIWSTAD 348 (417)
Q Consensus 285 ~~v~~~~~~G~l~ald~~tG~~lW~~~~~~-~~~~g~~~~~~~--~~~~~vy~~~~~~~~~~W~~~~ 348 (417)
..+..++.|+.+...|.++++..|....-. .... .....++ .++..|.....++.-.+|+...
T Consensus 220 ~~las~s~D~~v~iWd~~~~~~~~~~~~~~~~~~~-~~v~~~~~s~~g~~las~~~D~~v~lw~~~~ 285 (297)
T 2pm7_B 220 SYMASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFP-DVLWRASWSLSGNVLALSGGDNKVTLWKENL 285 (297)
T ss_dssp EEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCS-SCEEEEEECSSSCCEEEEETTSCEEEEEECT
T ss_pred eEEEEEECCCcEEEEEeCCCCCccceeeeecccCC-CcEEEEEECCCCCEEEEEcCCCcEEEEEECC
Confidence 567778889999999988766555443210 0011 1122222 3455565555566677898764
No 272
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=65.50 E-value=91 Score=29.29 Aligned_cols=57 Identities=12% Similarity=-0.081 Sum_probs=30.5
Q ss_pred eEEEEE-cccceEEEEECCCCcEEEEeecCCCCCCCcceecccccCCeEEEEeccCCceeeeec
Q 039692 285 DVVVAV-QKSGFAWAFDRDSGDIIWFKLAGPGGREGGGVWGAATDGRRVYTNIVNNDRIIWSTA 347 (417)
Q Consensus 285 ~~v~~~-~~~G~l~ald~~tG~~lW~~~~~~~~~~g~~~~~~~~~~~~vy~~~~~~~~~~W~~~ 347 (417)
+.||+. ...+.|+.+|.+.....-....+ ...-.+++++++.+|+.+...++ +++++
T Consensus 258 ~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~-----~~~P~giav~~~~ly~td~~~~~-V~~~~ 315 (386)
T 3v65_B 258 RRMYWVDAKHHVIERANLDGSHRKAVISQG-----LPHPFAITVFEDSLYWTDWHTKS-INSAN 315 (386)
T ss_dssp TEEEEEETTTTEEEEECTTSCSCEEEECSS-----CSSEEEEEEETTEEEEEETTTTE-EEEEE
T ss_pred CEEEEEECCCCEEEEEeCCCCeeEEEEECC-----CCCceEEEEECCEEEEeeCCCCe-EEEEE
Confidence 345555 34567777776532221111111 12223566788999999865553 45554
No 273
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=65.39 E-value=1.1e+02 Score=30.21 Aligned_cols=21 Identities=24% Similarity=0.379 Sum_probs=16.3
Q ss_pred CEEEEeccCCcEEEEECCCCc
Q 039692 49 GVVYFPSWNGYLYAVNAFNGA 69 (417)
Q Consensus 49 g~v~v~~~~g~l~ald~~tG~ 69 (417)
+.|..++.++.|..+|..+++
T Consensus 226 ~~LAs~s~DgtvrlWd~~~~~ 246 (524)
T 2j04_B 226 GCLSFVSQEGTINFLEIIDNA 246 (524)
T ss_dssp CEEEEEETTSCEEEEECCCCS
T ss_pred ceEEEEecCCeEEEEEcCCCc
Confidence 466667788999999988775
No 274
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=65.33 E-value=36 Score=34.96 Aligned_cols=105 Identities=10% Similarity=0.033 Sum_probs=57.6
Q ss_pred ECCEEEEecc----CCcEEEEECCCCcc-ceEeecccccCCcceee-EE-ee-e--------eeEEEEEecCCCceeeee
Q 039692 47 ANGVVYFPSW----NGYLYAVNAFNGAL-IWEQNLSKLTGLSGTGI-VV-NV-T--------VAVVVAVSRSNGELVWST 110 (417)
Q Consensus 47 ~~g~v~v~~~----~g~l~ald~~tG~~-~W~~~~~~~~~~~p~~~-v~-~~-~--------v~~l~ald~~tG~~~W~~ 110 (417)
.++.+|+.+. ...|+.+|.++++. .|+.-+...-......+ .. ++ . ...|+.+|..+|+.+-+.
T Consensus 296 dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~~~~~g~~~l~~~~~~~g~~~~~l 375 (710)
T 2xdw_A 296 EGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHDVKNTLQLHDLATGALLKIF 375 (710)
T ss_dssp ETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTTCCEEEEE
T ss_pred cCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCCEEEEEEEECCEEEEEEEECCCCCEEEec
Confidence 3567777654 34699999988864 67654432110000000 11 11 1 157899998888876665
Q ss_pred ecCCCCCcceeeceeEEcCeEEEEeCCccCccccCcccCCCceEEEEeCCCCc
Q 039692 111 QIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGR 163 (417)
Q Consensus 111 ~~~~~~~~~~~~sp~v~~~~v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~ 163 (417)
..+......+..+| .++.+++..++.. ..+.|+.+|..+|+
T Consensus 376 ~~~~~~v~~~~~s~--d~~~l~~~~ss~~----------~P~~i~~~d~~tg~ 416 (710)
T 2xdw_A 376 PLEVGSVVGYSGQK--KDTEIFYQFTSFL----------SPGIIYHCDLTKEE 416 (710)
T ss_dssp CCCSSEEEEEECCT--TCSEEEEEEECSS----------CCCEEEEEETTSSS
T ss_pred CCCCceEEEEecCC--CCCEEEEEEeCCC----------CCCEEEEEECCCCc
Confidence 54311111122223 2345665544311 24789999999988
No 275
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=65.04 E-value=79 Score=28.41 Aligned_cols=40 Identities=8% Similarity=-0.023 Sum_probs=22.6
Q ss_pred ceEEEEECCCCcEEEEeecCCCCCCCcceecccccCCeEEEEec
Q 039692 294 GFAWAFDRDSGDIIWFKLAGPGGREGGGVWGAATDGRRVYTNIV 337 (417)
Q Consensus 294 G~l~ald~~tG~~lW~~~~~~~~~~g~~~~~~~~~~~~vy~~~~ 337 (417)
..++++|..+. .|+.-...+ ........++.++.||+...
T Consensus 127 ~~~~~yd~~~~--~W~~~~~~p--~~r~~~~~~~~~~~iyv~GG 166 (318)
T 2woz_A 127 DSVLCYDPVAA--KWSEVKNLP--IKVYGHNVISHNGMIYCLGG 166 (318)
T ss_dssp EEEEEEETTTT--EEEEECCCS--SCEESCEEEEETTEEEEECC
T ss_pred ceEEEEeCCCC--CEeECCCCC--CcccccEEEEECCEEEEEcC
Confidence 35899998766 587654311 11112234446777887753
No 276
>1xd5_A Gastrodianin-1, antifungal protein GAFP-1; monocot mannose binding lectin, monomer, homogeneous beta- sheet; 2.00A {Gastrodia elata} SCOP: b.78.1.1 PDB: 1xd6_A
Probab=64.40 E-value=45 Score=25.36 Aligned_cols=19 Identities=21% Similarity=0.421 Sum_probs=14.8
Q ss_pred CCCeEEEEECCCCceEEEecC
Q 039692 220 YANSIVALDIDSGRIAWAKPL 240 (417)
Q Consensus 220 ~~~~l~ald~~tG~~~W~~~~ 240 (417)
.+|.|+..| +++++|+...
T Consensus 58 ~~GNLvl~d--~~~~~W~S~~ 76 (112)
T 1xd5_A 58 NDGNLVIYS--GSRAIWASNT 76 (112)
T ss_dssp TTSCEEEEE--TTEEEEECCC
T ss_pred CCCCEEEEc--CCEEEEECCc
Confidence 467888888 6899998554
No 277
>3a0c_A Mannose/sialic acid-binding lectin; beta-prism II, sugar binding protein; 2.00A {Polygonatum cyrtonema} PDB: 3a0d_A* 3a0e_A*
Probab=63.84 E-value=38 Score=25.77 Aligned_cols=21 Identities=24% Similarity=0.477 Sum_probs=16.0
Q ss_pred CCCeEEEEECCCCceEEEecCC
Q 039692 220 YANSIVALDIDSGRIAWAKPLG 241 (417)
Q Consensus 220 ~~~~l~ald~~tG~~~W~~~~~ 241 (417)
.+|.|+..|. +|+++|+....
T Consensus 59 ~dGNLVl~~~-~~~~~W~S~t~ 79 (110)
T 3a0c_A 59 NNGNLVIYDQ-SNRVIWQTKTN 79 (110)
T ss_dssp TTSCEEEECT-TCCEEEECCCC
T ss_pred CCCCEEEECC-CCcEEEecCCC
Confidence 4688888885 68999986543
No 278
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=63.68 E-value=86 Score=28.36 Aligned_cols=96 Identities=7% Similarity=-0.078 Sum_probs=50.8
Q ss_pred CEEEEeccCCcEEEEECCCCccc-----eEeecccccC------Cccee--eEEeeeeeEEEEEecCCCceeeeeecCCC
Q 039692 49 GVVYFPSWNGYLYAVNAFNGALI-----WEQNLSKLTG------LSGTG--IVVNVTVAVVVAVSRSNGELVWSTQIDPR 115 (417)
Q Consensus 49 g~v~v~~~~g~l~ald~~tG~~~-----W~~~~~~~~~------~~p~~--~v~~~~v~~l~ald~~tG~~~W~~~~~~~ 115 (417)
..|+.++.++.|...|..+++.. -...+.+... .+|.+ ++.....+.+...|..+|+.+-++.....
T Consensus 40 ~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~h~~ 119 (343)
T 2xzm_R 40 PVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFAISSSWDKTLRLWDLRTGTTYKRFVGHQS 119 (343)
T ss_dssp CEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEEEEEETTSEEEEEETTSSCEEEEEECCCS
T ss_pred CEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCC
Confidence 35667778899999998655421 1111111100 01110 11112238899999999988776653222
Q ss_pred CCcceeeceeEEcCeEEEEeCCccCccccCcccCCCceEEEEeCC
Q 039692 116 PRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVR 160 (417)
Q Consensus 116 ~~~~~~~sp~v~~~~v~v~~~~~~~~~~~~~~~~~~g~l~ald~~ 160 (417)
....+..+| .+..++.+.. ++.|..+|..
T Consensus 120 ~v~~v~~sp--~~~~l~s~~~--------------d~~i~~wd~~ 148 (343)
T 2xzm_R 120 EVYSVAFSP--DNRQILSAGA--------------EREIKLWNIL 148 (343)
T ss_dssp CEEEEEECS--STTEEEEEET--------------TSCEEEEESS
T ss_pred cEEEEEECC--CCCEEEEEcC--------------CCEEEEEecc
Confidence 111122333 1334555544 6889888886
No 279
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=63.01 E-value=66 Score=32.61 Aligned_cols=44 Identities=18% Similarity=0.241 Sum_probs=31.8
Q ss_pred ccceEEEEECCCCcEEEEeecCCCCCCCcceecccccCCeEEEEeccC
Q 039692 292 KSGFAWAFDRDSGDIIWFKLAGPGGREGGGVWGAATDGRRVYTNIVNN 339 (417)
Q Consensus 292 ~~G~l~ald~~tG~~lW~~~~~~~~~~g~~~~~~~~~~~~vy~~~~~~ 339 (417)
.++.+.++|.++.+++|+..++.. . .......+++.+|+.+.++
T Consensus 173 ~~~~vtvID~~t~~v~~qI~Vgg~-p---d~~~~spdGk~~~vt~~~s 216 (595)
T 1fwx_A 173 YVNVFTAVDADKWEVAWQVLVSGN-L---DNCDADYEGKWAFSTSYNS 216 (595)
T ss_dssp EEEEEEEEETTTTEEEEEEEESSC-C---CCEEECSSSSEEEEEESCT
T ss_pred cCceEEEEECCCCeEEEEEEeCCC-c---cceEECCCCCEEEEEecCc
Confidence 357899999999999999998521 1 1122344788999988655
No 280
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=62.06 E-value=1.4e+02 Score=30.31 Aligned_cols=22 Identities=14% Similarity=0.045 Sum_probs=16.9
Q ss_pred eEEEEEc-ccceEEEEECCCCcE
Q 039692 285 DVVVAVQ-KSGFAWAFDRDSGDI 306 (417)
Q Consensus 285 ~~v~~~~-~~G~l~ald~~tG~~ 306 (417)
+.||+.+ ..+.++.+|+.+|+.
T Consensus 218 ~~ly~tD~~~~~I~~~dk~tg~~ 240 (628)
T 4a0p_A 218 DYIYWTDWSRRSIERANKTSGQN 240 (628)
T ss_dssp TEEEEEETTTTEEEEEETTTCCS
T ss_pred CEEEEecCCCCEEEEEECCCCCc
Confidence 4677775 468999999988854
No 281
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=61.68 E-value=1.1e+02 Score=28.84 Aligned_cols=29 Identities=10% Similarity=-0.019 Sum_probs=21.7
Q ss_pred eEEEEEc-ccceEEEEECC-CCcEEEEeecC
Q 039692 285 DVVVAVQ-KSGFAWAFDRD-SGDIIWFKLAG 313 (417)
Q Consensus 285 ~~v~~~~-~~G~l~ald~~-tG~~lW~~~~~ 313 (417)
+++++.+ .+..+.++|++ +.+.+=++.++
T Consensus 244 gyLivSsQG~~s~~Vydr~~~~~~vg~f~Ig 274 (355)
T 3amr_A 244 GYLMASSQGNSSYAIYDRQGKNKYVADFRIT 274 (355)
T ss_dssp EEEEEEEGGGTEEEEEESSTTCCEEEEEEEC
T ss_pred EEEEEEcCCCCEEEEEECCCCCcEEEEEEec
Confidence 4566665 56789999997 77888888764
No 282
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=61.37 E-value=1.4e+02 Score=30.09 Aligned_cols=50 Identities=10% Similarity=0.148 Sum_probs=27.4
Q ss_pred CcEEEEECCCCccceEeecccc-------cCCccee-eEEeeeeeEEEEEecCCCceee
Q 039692 58 GYLYAVNAFNGALIWEQNLSKL-------TGLSGTG-IVVNVTVAVVVAVSRSNGELVW 108 (417)
Q Consensus 58 g~l~ald~~tG~~~W~~~~~~~-------~~~~p~~-~v~~~~v~~l~ald~~tG~~~W 108 (417)
+.++.+|.++|+. -+...... ...+|.+ .+.-...+.|+.+|..+|+.+-
T Consensus 91 ~~i~~~d~~~~~~-~~l~~~~~~~~~~~~~~~SPdG~~la~~~~~~i~~~~~~~g~~~~ 148 (723)
T 1xfd_A 91 GYYVLSKIPHGDP-QSLDPPEVSNAKLQYAGWGPKGQQLIFIFENNIYYCAHVGKQAIR 148 (723)
T ss_dssp SEEEEEESSSCCC-EECCCTTCCSCCCSBCCBCSSTTCEEEEETTEEEEESSSSSCCEE
T ss_pred eeEEEEECCCCce-EeccCCccccccccccEECCCCCEEEEEECCeEEEEECCCCceEE
Confidence 6788999988876 22222111 1223322 0110111789999998887653
No 283
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=60.00 E-value=42 Score=33.23 Aligned_cols=98 Identities=18% Similarity=0.054 Sum_probs=50.3
Q ss_pred EEEEeccCCcEEEEECCCCccceEeeccc-ccCCccee--eEEee----eeeEEEEEecCCCceeeeeecCCCCCcceee
Q 039692 50 VVYFPSWNGYLYAVNAFNGALIWEQNLSK-LTGLSGTG--IVVNV----TVAVVVAVSRSNGELVWSTQIDPRPRSQITM 122 (417)
Q Consensus 50 ~v~v~~~~g~l~ald~~tG~~~W~~~~~~-~~~~~p~~--~v~~~----~v~~l~ald~~tG~~~W~~~~~~~~~~~~~~ 122 (417)
.+|+....+.+..+|.++|+..--..... ....+|-+ ++... -...|+.+|+++|++. +.. ... . ...
T Consensus 124 ~~~~s~~~~~~~l~d~~~g~~~~l~~~~~~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~~-~l~--~~~-~-~~~ 198 (582)
T 3o4h_A 124 VVFTGATEDRVALYALDGGGLRELARLPGFGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLR-VFD--SGE-G-SFS 198 (582)
T ss_dssp EEEEEECSSCEEEEEEETTEEEEEEEESSCEEEEEEETTEEEEEEEEETTEEEEEEEETTTCCCE-EEC--CSS-C-EEE
T ss_pred EEEEecCCCCceEEEccCCcEEEeecCCCceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCce-Eee--cCC-C-ccc
Confidence 45555555566677777776533222221 11112321 11111 1166999999999875 222 111 1 122
Q ss_pred ceeEE-cCeEEEEeCCccCccccCcccCCCc--eEEEEeCCCCcee
Q 039692 123 SGSVY-MGAFYVGLSSLEEALPADQCCTFRG--SLAKLDVRNGRII 165 (417)
Q Consensus 123 sp~v~-~~~v~v~~~~~~~~~~~~~~~~~~g--~l~ald~~tG~~~ 165 (417)
+|... +++.++.... ++ .|+.+|.++|+..
T Consensus 199 ~~~~SpDG~~l~~~~~-------------~~~~~i~~~d~~~~~~~ 231 (582)
T 3o4h_A 199 SASISPGMKVTAGLET-------------AREARLVTVDPRDGSVE 231 (582)
T ss_dssp EEEECTTSCEEEEEEC-------------SSCEEEEEECTTTCCEE
T ss_pred cceECCCCCEEEEccC-------------CCeeEEEEEcCCCCcEE
Confidence 33322 5554443322 34 8999999999887
No 284
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=59.18 E-value=1e+02 Score=27.87 Aligned_cols=23 Identities=13% Similarity=0.433 Sum_probs=18.4
Q ss_pred eeEEEEEcccceEEEEECCCCcE
Q 039692 284 RDVVVAVQKSGFAWAFDRDSGDI 306 (417)
Q Consensus 284 ~~~v~~~~~~G~l~ald~~tG~~ 306 (417)
++.|+.++.|+.+...|..+++.
T Consensus 117 ~~~l~s~s~D~~v~iwd~~~~~~ 139 (345)
T 3fm0_A 117 GNLLATCSRDKSVWVWEVDEEDE 139 (345)
T ss_dssp SSEEEEEETTSCEEEEEECTTSC
T ss_pred CCEEEEEECCCeEEEEECCCCCC
Confidence 35788888999999999887753
No 285
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=59.14 E-value=1.6e+02 Score=29.93 Aligned_cols=50 Identities=4% Similarity=-0.190 Sum_probs=28.5
Q ss_pred eEEEEE-cccceEEEEECCCCcEEEEeecCCCCCCCcceecccccCCeEEEEeccCC
Q 039692 285 DVVVAV-QKSGFAWAFDRDSGDIIWFKLAGPGGREGGGVWGAATDGRRVYTNIVNND 340 (417)
Q Consensus 285 ~~v~~~-~~~G~l~ald~~tG~~lW~~~~~~~~~~g~~~~~~~~~~~~vy~~~~~~~ 340 (417)
+.||++ ...+.+..+|.+.+...-.... ...-.+++++++.+|+++...+
T Consensus 178 ~~LY~aD~~~~~I~~~d~dG~~~~v~~~~------l~~P~glav~~~~ly~tD~~~~ 228 (628)
T 4a0p_A 178 RRLYWTDLDTNLIESSNMLGLNREVIADD------LPHPFGLTQYQDYIYWTDWSRR 228 (628)
T ss_dssp TEEEEEETTTTEEEEEETTSCSCEEEEEC------CSCEEEEEEETTEEEEEETTTT
T ss_pred CEEEEEECCCCEEEEEcCCCCceEEeecc------CCCceEEEEECCEEEEecCCCC
Confidence 355655 4557788888764433111110 1223456778889999986544
No 286
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=59.02 E-value=1.5e+02 Score=29.59 Aligned_cols=23 Identities=13% Similarity=-0.013 Sum_probs=15.1
Q ss_pred eEEEEEcc---cceEEEEECCCCcEE
Q 039692 285 DVVVAVQK---SGFAWAFDRDSGDII 307 (417)
Q Consensus 285 ~~v~~~~~---~G~l~ald~~tG~~l 307 (417)
.++++... ...++.+|.++|+..
T Consensus 348 ~~~~~~~~~~~~~~i~~~d~~~g~~~ 373 (662)
T 3azo_A 348 RAVGVAASPRTAYEVVELDTVTGRAR 373 (662)
T ss_dssp EEEEEEEETTEEEEEEEEETTTCCEE
T ss_pred EEEEEEcCCCCCCEEEEEECCCCceE
Confidence 44554432 247999999998764
No 287
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=59.01 E-value=1.4e+02 Score=30.41 Aligned_cols=64 Identities=8% Similarity=0.075 Sum_probs=36.5
Q ss_pred eEEEEEecCCCce-eeeeecCCCCCcceeeceeEE-cCeEEEEeCCccCccccCcccCCCceEEEEeCCCCceeceee
Q 039692 94 AVVVAVSRSNGEL-VWSTQIDPRPRSQITMSGSVY-MGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTY 169 (417)
Q Consensus 94 ~~l~ald~~tG~~-~W~~~~~~~~~~~~~~sp~v~-~~~v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~~~W~~~ 169 (417)
..|+.+|.++++. .|+.-+.+.... ........ ++.+++...... ...|+.+|.++|+.+-+..
T Consensus 311 ~~l~~~d~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~lv~~~~~~g-----------~~~l~~~~~~~g~~~~~l~ 376 (710)
T 2xdw_A 311 YRLINIDFTDPEESKWKVLVPEHEKD-VLEWVACVRSNFLVLCYLHDV-----------KNTLQLHDLATGALLKIFP 376 (710)
T ss_dssp CEEEEEETTSCCGGGCEEEECCCSSC-EEEEEEEETTTEEEEEEEETT-----------EEEEEEEETTTCCEEEEEC
T ss_pred CEEEEEeCCCCCcccceeccCCCCCC-eEEEEEEEcCCEEEEEEEECC-----------EEEEEEEECCCCCEEEecC
Confidence 5799999888753 566544432211 12223334 666666543200 2378999988888665443
No 288
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=57.94 E-value=1.3e+02 Score=28.40 Aligned_cols=162 Identities=14% Similarity=0.131 Sum_probs=81.0
Q ss_pred CCEEEEec---cCCcEEEEEC-CCCccceEeecccccC----Ccce-----eeEEeeeeeEEEEEecCCCceeeeeecCC
Q 039692 48 NGVVYFPS---WNGYLYAVNA-FNGALIWEQNLSKLTG----LSGT-----GIVVNVTVAVVVAVSRSNGELVWSTQIDP 114 (417)
Q Consensus 48 ~g~v~v~~---~~g~l~ald~-~tG~~~W~~~~~~~~~----~~p~-----~~v~~~~v~~l~ald~~tG~~~W~~~~~~ 114 (417)
++++..++ .++.|..++. .+|+.+=+........ .+|. .++.....+.+...|++||+.+-++...+
T Consensus 144 ~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~ 223 (356)
T 2w18_A 144 KRRLVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDD 223 (356)
T ss_dssp TTEEEEEESSSTTCEEEEEEECTTSCEEEEEEECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC
T ss_pred CCcEEEecccCCCCcEEEEEECCCCceeeeeccCCCceeeEEeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCCC
Confidence 45555554 3777777776 4577655544432211 1120 01222244999999999999998887432
Q ss_pred CCCcce---eeceeEEcCeEEEEeCCccCccccCcccCCCceEEEEeCCCCceeceeeec-CCCCCCCCCCCCccccCCC
Q 039692 115 RPRSQI---TMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYML-PDNGGKRGGYSGAAVWGSS 190 (417)
Q Consensus 115 ~~~~~~---~~sp~v~~~~v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~~~W~~~~~-~~~~~~~~~~~gg~~~~~~ 190 (417)
.....+ ..+| ++.+++..+..... -....+..++.+...|+++|+.+-.+... |.+.. +
T Consensus 224 ~~v~~v~~vafSp---dG~~lvs~s~~~~~-w~laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~------~------- 286 (356)
T 2w18_A 224 SYQASVCHKAYSE---MGLLFIVLSHPCAK-ESESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQA------G------- 286 (356)
T ss_dssp ---CCCEEEEEEE---TTEEEEEEC-------------CCEEEEEEETTTTEEEEEEEECCCTTCC------C-------
T ss_pred cceeeeEEEEECC---CCCEEEEeccCCCc-ceeeccCCCcEEEEEECCCCEEEEEEEeeccCCCc------c-------
Confidence 211111 2334 55554332210000 00001233688889999999887544321 11110 0
Q ss_pred ceeecccCcccCCCCCCCCCCCCcccCCCCCCeEEEEECCCCceEEEec
Q 039692 191 PAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKP 239 (417)
Q Consensus 191 pa~d~~~~~~~~~~~~~p~~~~~~v~~~~~~~~l~ald~~tG~~~W~~~ 239 (417)
..++.... +..+..++.++.+...|.++|+.+=.++
T Consensus 287 ~~lsg~~s-------------g~~lASgS~DgTIkIWDl~tGk~l~tL~ 322 (356)
T 2w18_A 287 RFLEGDVK-------------DHCAAAILTSGTIAIWDLLLGQCTALLP 322 (356)
T ss_dssp CEEEEEEE-------------TTEEEEEETTSCEEEEETTTCSEEEEEC
T ss_pred eeEccccC-------------CCEEEEEcCCCcEEEEECCCCcEEEEec
Confidence 01110000 0112234467889999999999887665
No 289
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=57.78 E-value=1.6e+02 Score=29.69 Aligned_cols=108 Identities=13% Similarity=0.045 Sum_probs=57.1
Q ss_pred CCEEEEeccC------------CcEEEEECCCCccceEeecc--ccc--CCcceeeEEee--ee------eEEEEEecCC
Q 039692 48 NGVVYFPSWN------------GYLYAVNAFNGALIWEQNLS--KLT--GLSGTGIVVNV--TV------AVVVAVSRSN 103 (417)
Q Consensus 48 ~g~v~v~~~~------------g~l~ald~~tG~~~W~~~~~--~~~--~~~p~~~v~~~--~v------~~l~ald~~t 103 (417)
+++||+.... ..++.+|+.+++ |+.-.. ... .++...++.++ ++ ..++.+|..+
T Consensus 197 ~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~--w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~~yd~~t 274 (656)
T 1k3i_A 197 SGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGI--VSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSLYDSSS 274 (656)
T ss_dssp TTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCC--BCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEEEEGGG
T ss_pred CCEEEEEecccccccccCCCCeEEEEEEeCCCCc--EEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCceEEecCcC
Confidence 8898886421 158899998875 553221 111 11111111222 11 4689999876
Q ss_pred CceeeeeecCCCCCcceeeceeEE-cCeEEEEeCCccCccccCcccCCCceEEEEeCCCCceeceee
Q 039692 104 GELVWSTQIDPRPRSQITMSGSVY-MGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTY 169 (417)
Q Consensus 104 G~~~W~~~~~~~~~~~~~~sp~v~-~~~v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~~~W~~~ 169 (417)
+ .|+.-. .........+-++. +++||+.....+.. .....+.++|+++++ |+.-
T Consensus 275 ~--~W~~~~-~~~~~R~~~s~~~~~dg~iyv~GG~~~~~-------~~~~~~e~yd~~t~~--W~~~ 329 (656)
T 1k3i_A 275 D--SWIPGP-DMQVARGYQSSATMSDGRVFTIGGSWSGG-------VFEKNGEVYSPSSKT--WTSL 329 (656)
T ss_dssp T--EEEECC-CCSSCCSSCEEEECTTSCEEEECCCCCSS-------SCCCCEEEEETTTTE--EEEE
T ss_pred C--ceeECC-CCCccccccceEEecCCeEEEEeCcccCC-------cccccceEeCCCCCc--ceeC
Confidence 6 587542 22212222333455 88888755411110 012578999998765 8753
No 290
>3dzw_A Agglutinin; lectin, mannobiose, mannose-alpha1, 3-mannose, D sugar binding protein; HET: MAN; 1.70A {Narcissus pseudonarcissus} SCOP: b.78.1.1 PDB: 1npl_A* 1jpc_A* 1msa_A* 1niv_A*
Probab=57.17 E-value=55 Score=24.75 Aligned_cols=21 Identities=19% Similarity=0.338 Sum_probs=15.7
Q ss_pred cccceEEEEECCCCcEEEEeec
Q 039692 291 QKSGFAWAFDRDSGDIIWFKLA 312 (417)
Q Consensus 291 ~~~G~l~ald~~tG~~lW~~~~ 312 (417)
..+|.|+.+|. +|+.+|+...
T Consensus 57 ~~dGNLvl~~~-~~~~~W~S~t 77 (109)
T 3dzw_A 57 QSDGNLVVYSP-RNNPIWASNT 77 (109)
T ss_dssp CTTSCEEEECT-TSCEEEECCC
T ss_pred eCCCCEEEECC-CCCEEEECCC
Confidence 46788888874 5789998765
No 291
>1b2p_A Protein (lectin); mannose-binding lectin, monocot, aglutinin, bluebell bulbs, carbohydrate interactions, sugar binding protein; 1.70A {Hyacinthoides hispanica} SCOP: b.78.1.1
Probab=56.32 E-value=67 Score=24.78 Aligned_cols=22 Identities=14% Similarity=0.290 Sum_probs=17.0
Q ss_pred cccceEEEEECCCCcEEEEeecC
Q 039692 291 QKSGFAWAFDRDSGDIIWFKLAG 313 (417)
Q Consensus 291 ~~~G~l~ald~~tG~~lW~~~~~ 313 (417)
..+|.|+..| .+|+.+|+....
T Consensus 68 ~~dGNLVl~d-~~~~~lW~S~~~ 89 (119)
T 1b2p_A 68 QPDGVLVVIT-NENVTVWQSPVA 89 (119)
T ss_dssp CTTSCEEEEC-TTCCEEEECSCC
T ss_pred ccCCEEEEEe-CCCcEEEcCCCC
Confidence 4678888887 468999998764
No 292
>3mez_B Mannose-specific lectin 3 chain 2; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0
Probab=56.15 E-value=65 Score=24.55 Aligned_cols=60 Identities=7% Similarity=0.042 Sum_probs=38.0
Q ss_pred eEEEEEcccceEEEEECCCCcEEEEeecCCCCCCCcceecccccCCeEEEEeccCCceeeeecC
Q 039692 285 DVVVAVQKSGFAWAFDRDSGDIIWFKLAGPGGREGGGVWGAATDGRRVYTNIVNNDRIIWSTAD 348 (417)
Q Consensus 285 ~~v~~~~~~G~l~ald~~tG~~lW~~~~~~~~~~g~~~~~~~~~~~~vy~~~~~~~~~~W~~~~ 348 (417)
...+....||.|...+...++.+|...... .+........+++.+++.+. .++.+|+...
T Consensus 25 ~~~L~~q~dGNLvL~~~~~~~~vWssnt~~---~~~~~~l~l~~dGNLVl~d~-~~~~iW~S~t 84 (113)
T 3mez_B 25 DYSLVMRDDCNLVLTKGSKTNIVWESGTSG---RGQHCFMRLGHSGELDITDD-RLNTVFVSNT 84 (113)
T ss_dssp TEEEEECTTSCEEEEETTTTEEEEECCCTT---SCSSCEEEECTTSCEEEECT-TSCEEEECSC
T ss_pred CEEEEEcCCCEEEEEECCCCEEEEECCccc---CCcCEEEEEeCCCcEEEECC-CCCEEEECCC
Confidence 445556788999999876689999987531 11111112235666766664 4578999765
No 293
>4h3o_A Lectin; cadmium, plant protein; 2.17A {Allium sativum} PDB: 1kj1_A* 1bwu_P* 1kj1_D* 1bwu_Q* 1bwu_A* 1bwu_D*
Probab=56.12 E-value=62 Score=24.33 Aligned_cols=21 Identities=33% Similarity=0.468 Sum_probs=16.1
Q ss_pred CCCeEEEEECCCCceEEEecCC
Q 039692 220 YANSIVALDIDSGRIAWAKPLG 241 (417)
Q Consensus 220 ~~~~l~ald~~tG~~~W~~~~~ 241 (417)
.+|.|+.+|. +|+++|+....
T Consensus 59 ~dGnLvL~d~-~~~~vWss~t~ 79 (105)
T 4h3o_A 59 SDGNFVVYDS-SGRSLWASHST 79 (105)
T ss_dssp TTSCEEEECT-TCCEEEECCCC
T ss_pred CCccEEEECC-CcEEEEEecCC
Confidence 4688988884 68999986543
No 294
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=55.23 E-value=1.8e+02 Score=29.30 Aligned_cols=58 Identities=17% Similarity=0.265 Sum_probs=32.1
Q ss_pred eEEEEEecCCCceeeeeecCCCCC--cceeeceeEEcCe-EEEEeCCccCccccCcccCCCceEEEEeCCCCc
Q 039692 94 AVVVAVSRSNGELVWSTQIDPRPR--SQITMSGSVYMGA-FYVGLSSLEEALPADQCCTFRGSLAKLDVRNGR 163 (417)
Q Consensus 94 ~~l~ald~~tG~~~W~~~~~~~~~--~~~~~sp~v~~~~-v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~ 163 (417)
..|+.+|.++|+............ ..+..+| +++ +++...+... ....|+.+|.++|+
T Consensus 235 ~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~sp---dg~~l~~~~~~~~~---------~~~~v~~~d~~~g~ 295 (706)
T 2z3z_A 235 VTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSP---DENILYVAEVNRAQ---------NECKVNAYDAETGR 295 (706)
T ss_dssp EEEEEEETTTTEEEECCCCSCTTCEEEEEEECT---TSSEEEEEEECTTS---------CEEEEEEEETTTCC
T ss_pred eEEEEEECCCCceEeeccCCCCceeEeeEEEEC---CCCEEEEEEeCCCC---------CeeEEEEEECCCCc
Confidence 679999999998765443211111 1122233 444 6665432100 12489999999993
No 295
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=54.24 E-value=70 Score=30.47 Aligned_cols=62 Identities=18% Similarity=0.068 Sum_probs=42.3
Q ss_pred eEEEEEecCCC--ceeeeeecCCCCC--cceeeceeEE---------cCeEEEEeCCccCccccCcccCCCceEEEEeCC
Q 039692 94 AVVVAVSRSNG--ELVWSTQIDPRPR--SQITMSGSVY---------MGAFYVGLSSLEEALPADQCCTFRGSLAKLDVR 160 (417)
Q Consensus 94 ~~l~ald~~tG--~~~W~~~~~~~~~--~~~~~sp~v~---------~~~v~v~~~~~~~~~~~~~~~~~~g~l~ald~~ 160 (417)
-+|.+||++|+ +++-++.++.+.. .......+|. ++.+|+.-.. ...|+.+|.+
T Consensus 123 pkLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~c~~~~aYItD~~-------------~~gLIVydl~ 189 (381)
T 3q6k_A 123 PAIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGDCSETFVYITNFL-------------RGALFIYDHK 189 (381)
T ss_dssp CEEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTTTSCSEEEEEEETT-------------TTEEEEEETT
T ss_pred ceEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCCCCCccEEEEEcCC-------------CCcEEEEECC
Confidence 47899999999 9999999864321 1122333444 3457877654 4789999998
Q ss_pred CCceeceee
Q 039692 161 NGRIIWQTY 169 (417)
Q Consensus 161 tG~~~W~~~ 169 (417)
+| ..|++.
T Consensus 190 ~~-~swRv~ 197 (381)
T 3q6k_A 190 KQ-DSWNVT 197 (381)
T ss_dssp TT-EEEEEE
T ss_pred CC-cEEEEc
Confidence 55 567765
No 296
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=53.77 E-value=2.2e+02 Score=29.90 Aligned_cols=59 Identities=17% Similarity=0.057 Sum_probs=30.8
Q ss_pred eEEEEEc-ccceEEEEECCCCcEEEEeecCCCCCCCcceecccccCCeEEEEeccCCceeeeec
Q 039692 285 DVVVAVQ-KSGFAWAFDRDSGDIIWFKLAGPGGREGGGVWGAATDGRRVYTNIVNNDRIIWSTA 347 (417)
Q Consensus 285 ~~v~~~~-~~G~l~ald~~tG~~lW~~~~~~~~~~g~~~~~~~~~~~~vy~~~~~~~~~~W~~~ 347 (417)
+.||+++ ....|..+|.+ |+.+...-.....+ ..-+++++++++||+++...+ .+++.+
T Consensus 570 ~~LYwaD~~~~~I~~~d~d-G~~~~~v~~~~~~l--~~P~glav~~~~lYwtD~~~~-~I~~~d 629 (791)
T 3m0c_C 570 GRLYWVDSKLHSISSIDVN-GGNRKTILEDEKRL--AHPFSLAVFEDKVFWTDIINE-AIFSAN 629 (791)
T ss_dssp TEEEEEETTTTEEEEEETT-SCSCEEEEECTTTT--SSEEEEEEETTEEEEEETTTT-EEEEEE
T ss_pred CeEEEEeCCCCcEEEEecC-CCceEEEecCCCcc--CCCCEEEEeCCEEEEEECCCC-EEEEEe
Confidence 3455553 44567777764 43333332111001 122356678889999986654 345544
No 297
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=52.17 E-value=1.5e+02 Score=27.62 Aligned_cols=63 Identities=17% Similarity=0.176 Sum_probs=33.6
Q ss_pred EEEEEcc-cceEEEEECCCCcEEEEeecCCCCCCC-cceeccccc-----CCeEEEEecc-CCceeeeecC
Q 039692 286 VVVAVQK-SGFAWAFDRDSGDIIWFKLAGPGGREG-GGVWGAATD-----GRRVYTNIVN-NDRIIWSTAD 348 (417)
Q Consensus 286 ~v~~~~~-~G~l~ald~~tG~~lW~~~~~~~~~~g-~~~~~~~~~-----~~~vy~~~~~-~~~~~W~~~~ 348 (417)
.+|+..+ .|+|+.|+.++|+..=...++.-...+ .....++++ ++.||+.... ....+.+...
T Consensus 44 ~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v~R~~~ 114 (347)
T 3das_A 44 DLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNRIVRMLY 114 (347)
T ss_dssp CEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEEEEEEEB
T ss_pred cEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCEEEEEEe
Confidence 3677776 899999998888753222221100111 122345553 5889987432 2334555543
No 298
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=51.22 E-value=57 Score=33.19 Aligned_cols=99 Identities=14% Similarity=0.046 Sum_probs=56.5
Q ss_pred CCEEEEeccCCcEEEEECCCCccceEeeccc-------ccCCccee--eEEee---------eeeEEEEEecCCCceeee
Q 039692 48 NGVVYFPSWNGYLYAVNAFNGALIWEQNLSK-------LTGLSGTG--IVVNV---------TVAVVVAVSRSNGELVWS 109 (417)
Q Consensus 48 ~g~v~v~~~~g~l~ald~~tG~~~W~~~~~~-------~~~~~p~~--~v~~~---------~v~~l~ald~~tG~~~W~ 109 (417)
++.++..+.++.|+.+|.++|+.+=...... ....+|-+ ++... ..+.|+.+|.++|+.+..
T Consensus 26 dg~~~~~~~d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~ 105 (719)
T 1z68_A 26 GQEYLHQSADNNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRG 105 (719)
T ss_dssp SSEEEEECTTSCEEEEESSSCCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCS
T ss_pred CCeEEEEcCCCCEEEEEcCCCcEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCccccc
Confidence 4555556668899999999998643332211 11123432 11111 147899999999987533
Q ss_pred eecCCCCCcceeeceeEEcCe-EEEEeCCccCccccCcccCCCceEEEEeCCCCcee
Q 039692 110 TQIDPRPRSQITMSGSVYMGA-FYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRII 165 (417)
Q Consensus 110 ~~~~~~~~~~~~~sp~v~~~~-v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~~~ 165 (417)
.++... ...+.-+| +++ |.+.. ++.|+..|..+|+.+
T Consensus 106 ~~l~~~-~~~~~~SP---DG~~la~~~---------------~~~i~~~~~~~g~~~ 143 (719)
T 1z68_A 106 NELPRP-IQYLCWSP---VGSKLAYVY---------------QNNIYLKQRPGDPPF 143 (719)
T ss_dssp SCCCSS-BCCEEECS---STTCEEEEE---------------TTEEEEESSTTSCCE
T ss_pred eecCcc-cccceECC---CCCEEEEEE---------------CCeEEEEeCCCCCcE
Confidence 333221 12244455 554 44443 368999998888754
No 299
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=47.19 E-value=1.6e+02 Score=26.34 Aligned_cols=95 Identities=13% Similarity=-0.009 Sum_probs=50.5
Q ss_pred CEEEEec-cCCcEEEEECCCCcc-ceEeecccccCCcceeeEE--ee--e---------------eeEEEEEecCCCcee
Q 039692 49 GVVYFPS-WNGYLYAVNAFNGAL-IWEQNLSKLTGLSGTGIVV--NV--T---------------VAVVVAVSRSNGELV 107 (417)
Q Consensus 49 g~v~v~~-~~g~l~ald~~tG~~-~W~~~~~~~~~~~p~~~v~--~~--~---------------v~~l~ald~~tG~~~ 107 (417)
..||++. ..+.|+.+|.++++. ..+.-. .. .. |.++.. ++ . -+.|+.+|. +|+++
T Consensus 197 ~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~-~~-~g-P~gi~~d~~G~l~va~~~~~~~~~~~~~~~~v~~~d~-~G~~~ 272 (322)
T 2fp8_A 197 SFVLVAEFLSHQIVKYWLEGPKKGTAEVLV-KI-PN-PGNIKRNADGHFWVSSSEELDGNMHGRVDPKGIKFDE-FGNIL 272 (322)
T ss_dssp SEEEEEEGGGTEEEEEESSSTTTTCEEEEE-EC-SS-EEEEEECTTSCEEEEEEEETTSSTTSCEEEEEEEECT-TSCEE
T ss_pred CEEEEEeCCCCeEEEEECCCCcCCccceEE-eC-CC-CCCeEECCCCCEEEEecCcccccccCCCccEEEEECC-CCCEE
Confidence 3688885 457899999865321 111100 01 11 433221 11 1 245889996 58887
Q ss_pred eeeecCCCCCcceeeceeEEcCeEEEEeCCccCccccCcccCCCceEEEEeCC
Q 039692 108 WSTQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVR 160 (417)
Q Consensus 108 W~~~~~~~~~~~~~~sp~v~~~~v~v~~~~~~~~~~~~~~~~~~g~l~ald~~ 160 (417)
=.+..+...........+..++.+|++... ++.|..++++
T Consensus 273 ~~~~~~~g~~~~~~~~~~~~~g~L~v~~~~-------------~~~i~~~~~~ 312 (322)
T 2fp8_A 273 EVIPLPPPFAGEHFEQIQEHDGLLYIGTLF-------------HGSVGILVYD 312 (322)
T ss_dssp EEEECCTTTTTSCCCEEEEETTEEEEECSS-------------CSEEEEEEC-
T ss_pred EEEECCCCCccccceEEEEeCCEEEEeecC-------------CCceEEEecc
Confidence 666644221011122223457889988654 4678888864
No 300
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=46.58 E-value=2.4e+02 Score=30.21 Aligned_cols=18 Identities=17% Similarity=0.235 Sum_probs=14.7
Q ss_pred CceEEEEeCCCCceecee
Q 039692 151 RGSLAKLDVRNGRIIWQT 168 (417)
Q Consensus 151 ~g~l~ald~~tG~~~W~~ 168 (417)
++.|+.+|.++|+.+-..
T Consensus 399 ~~~v~~~d~~tg~~~~~~ 416 (1045)
T 1k32_A 399 RFEIMTVDLETGKPTVIE 416 (1045)
T ss_dssp TSEEEEEETTTCCEEEEE
T ss_pred CCeEEEEECCCCceEEec
Confidence 579999999999876544
No 301
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=43.06 E-value=2.7e+02 Score=28.36 Aligned_cols=61 Identities=8% Similarity=0.058 Sum_probs=31.2
Q ss_pred eEEEEEcc----cceEEEEECCCCcEEEEeecCCCCCCCcceecccccCCeEEEEeccCC-ceeeeecC
Q 039692 285 DVVVAVQK----SGFAWAFDRDSGDIIWFKLAGPGGREGGGVWGAATDGRRVYTNIVNND-RIIWSTAD 348 (417)
Q Consensus 285 ~~v~~~~~----~G~l~ald~~tG~~lW~~~~~~~~~~g~~~~~~~~~~~~vy~~~~~~~-~~~W~~~~ 348 (417)
+.|++.+. +++|+.+|.++++..|+.-++.. . .....+...++.+++....++ ..+|..+.
T Consensus 328 ~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~--~-~~l~~~~~~~~~lv~~~~~dg~~~l~~~~~ 393 (741)
T 1yr2_A 328 DQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPES--K-DNLESVGIAGNRLFASYIHDAKSQVLAFDL 393 (741)
T ss_dssp TEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCC--S-SEEEEEEEEBTEEEEEEEETTEEEEEEEET
T ss_pred CEEEEEECCCCCCCEEEEEeCCCCccccEEEecCC--C-CeEEEEEEECCEEEEEEEECCEEEEEEEeC
Confidence 44554432 46799999887633455444211 1 111223334555655544443 55676653
No 302
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=42.15 E-value=1.7e+02 Score=28.32 Aligned_cols=53 Identities=11% Similarity=0.040 Sum_probs=30.1
Q ss_pred EEEEEcccc-eEEEEECCCCcEEEEeecCCCCC---CCcceeccccc-----CCeEEEEecc
Q 039692 286 VVVAVQKSG-FAWAFDRDSGDIIWFKLAGPGGR---EGGGVWGAATD-----GRRVYTNIVN 338 (417)
Q Consensus 286 ~v~~~~~~G-~l~ald~~tG~~lW~~~~~~~~~---~g~~~~~~~~~-----~~~vy~~~~~ 338 (417)
.||++...| +|+.|+..+|+..=...+..... ..+....++++ ++.||+....
T Consensus 39 ~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~ 100 (454)
T 1cru_A 39 QIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTF 100 (454)
T ss_dssp CEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEE
T ss_pred cEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEec
Confidence 467777765 79999987786532222221100 01122245555 7899999753
No 303
>3dzw_A Agglutinin; lectin, mannobiose, mannose-alpha1, 3-mannose, D sugar binding protein; HET: MAN; 1.70A {Narcissus pseudonarcissus} SCOP: b.78.1.1 PDB: 1npl_A* 1jpc_A* 1msa_A* 1niv_A*
Probab=41.78 E-value=1.1e+02 Score=22.99 Aligned_cols=58 Identities=14% Similarity=0.156 Sum_probs=35.3
Q ss_pred eEEEEEcccceEEEEECCCCcEEEEeecCCCCCCCcceecccccCCeEEEEeccCCceeeeecC
Q 039692 285 DVVVAVQKSGFAWAFDRDSGDIIWFKLAGPGGREGGGVWGAATDGRRVYTNIVNNDRIIWSTAD 348 (417)
Q Consensus 285 ~~v~~~~~~G~l~ald~~tG~~lW~~~~~~~~~~g~~~~~~~~~~~~vy~~~~~~~~~~W~~~~ 348 (417)
...+....||.|+.++. ++.+|....... +........+++.+++.+. .++.+|+...
T Consensus 20 ~~~L~~q~dGnLvly~~--~~~vW~snt~~~---~~~~~l~l~~dGNLvl~~~-~~~~~W~S~t 77 (109)
T 3dzw_A 20 RYVFIMQEDCNLVLYDV--DKPIWATNTGGL---DRRCHLSMQSDGNLVVYSP-RNNPIWASNT 77 (109)
T ss_dssp TEEEEECTTSCEEEEET--TEEEEECCCTTS---SSSCEEEECTTSCEEEECT-TSCEEEECCC
T ss_pred CEEEEEcCCCcEEEEeC--CEEEEECCcccC---CCCEEEEEeCCCCEEEECC-CCCEEEECCC
Confidence 34444567888888886 789999875311 1111112235566666654 4578998764
No 304
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=41.58 E-value=1.9e+02 Score=25.78 Aligned_cols=228 Identities=10% Similarity=-0.024 Sum_probs=0.0
Q ss_pred CCEEEEeccCCcEEEEEC-------CCCccceEeeccc----ccCCccee--eEEeeeeeEEEEEec----CCCceeeee
Q 039692 48 NGVVYFPSWNGYLYAVNA-------FNGALIWEQNLSK----LTGLSGTG--IVVNVTVAVVVAVSR----SNGELVWST 110 (417)
Q Consensus 48 ~g~v~v~~~~g~l~ald~-------~tG~~~W~~~~~~----~~~~~p~~--~v~~~~v~~l~ald~----~tG~~~W~~ 110 (417)
+..++.++.++.|...|. .+++.+-.+.-.. .+..+|.+ ++..+..+.+...|. ...+.+-..
T Consensus 70 ~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~ 149 (330)
T 2hes_X 70 TSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVL 149 (330)
T ss_dssp SSEEEEEETTSCEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEE
T ss_pred CCEEEEEeCCCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEe
Q ss_pred ecCCCCCcceeeceeEEcCeEEEEeCCccCccccCcccCCCceEEEEeCCCC--ceeceeeecCCCCCCCCCCCCccccC
Q 039692 111 QIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNG--RIIWQTYMLPDNGGKRGGYSGAAVWG 188 (417)
Q Consensus 111 ~~~~~~~~~~~~sp~v~~~~v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG--~~~W~~~~~~~~~~~~~~~~gg~~~~ 188 (417)
.........+..+| ++.+++..+. ++.|...|..++ +.+-.+........
T Consensus 150 ~~h~~~v~~v~~~p---~~~~l~s~s~-------------D~~i~iW~~~~~~~~~~~~~~~h~~~v~------------ 201 (330)
T 2hes_X 150 QEHSQDVKHVIWHP---SEALLASSSY-------------DDTVRIWKDYDDDWECVAVLNGHEGTVW------------ 201 (330)
T ss_dssp CCCSSCEEEEEECS---SSSEEEEEET-------------TSCEEEEEEETTEEEEEEEECCCSSCEE------------
T ss_pred ccCCCceEEEEECC---CCCEEEEEcC-------------CCeEEEEECCCCCeeEEEEccCCCCcEE------------
Q ss_pred CCceeecccCcccCCCCCCCCCCCCcccCCCCCCeEEEEECCCC--------ceEEEecCCCCcceeeeccCCCCCCCCC
Q 039692 189 SSPAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSG--------RIAWAKPLGGYDIFYFTCLVPNNPDCPP 260 (417)
Q Consensus 189 ~~pa~d~~~~~~~~~~~~~p~~~~~~v~~~~~~~~l~ald~~tG--------~~~W~~~~~~~~~~~~~~~~~~~~~c~~ 260 (417)
..++.+.... ..+..++.++.+...|.+++ +..-........
T Consensus 202 -~~~~~~~~~~-------------~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~---------------- 251 (330)
T 2hes_X 202 -SSDFDKTEGV-------------FRLCSGSDDSTVRVWKYMGDDEDDQQEWVCEAILPDVHKR---------------- 251 (330)
T ss_dssp -EEEECCSSSS-------------CEEEEEETTSCEEEEEEEEECTTSCEEEEEEEECCSCCSS----------------
T ss_pred -EEEecCCCCe-------------eEEEEEeCCCeEEEEEecCCCccccceeEEeeeccccccc----------------
Q ss_pred CCCCCCccCCCceEEEEecCCeeeeEEEEEcccceEEEEECCCC--cEEEEeecCCCC-CCCcceecccccCCeEEEEec
Q 039692 261 GPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSG--DIIWFKLAGPGG-REGGGVWGAATDGRRVYTNIV 337 (417)
Q Consensus 261 ~~~~~~~~~~~p~v~~~~~~G~~~~~v~~~~~~G~l~ald~~tG--~~lW~~~~~~~~-~~g~~~~~~~~~~~~vy~~~~ 337 (417)
.+..+.... +..|+.++.||.+...|..+| +.+-........ ......+.+..++..|.....
T Consensus 252 ------------~v~~v~~s~--~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~h~~~~v~~v~~~~~~~~~~las~s~ 317 (330)
T 2hes_X 252 ------------QVYNVAWGF--NGLIASVGADGVLAVYEEVDGEWKVFAKRALCHGVYEINVVKWLELNGKTILATGGD 317 (330)
T ss_dssp ------------CEEEEEECT--TSCEEEEETTSCEEEEEEETTEEEEEEEESCTTTTSCEEEEEEC-----CCEEEEET
T ss_pred ------------ceEEEEEcC--CCEEEEEeCCCEEEEEEcCCCceEEEeccccccccceEEEEEEecCCCceEEEEecC
Q ss_pred cCCceeeeec
Q 039692 338 NNDRIIWSTA 347 (417)
Q Consensus 338 ~~~~~~W~~~ 347 (417)
++.-.+|..+
T Consensus 318 Dg~v~~W~~~ 327 (330)
T 2hes_X 318 DGIVNFWSLE 327 (330)
T ss_dssp TSEEEEEEC-
T ss_pred CCcEEEEEec
No 305
>4h3o_A Lectin; cadmium, plant protein; 2.17A {Allium sativum} PDB: 1kj1_A* 1bwu_P* 1kj1_D* 1bwu_Q* 1bwu_A* 1bwu_D*
Probab=40.12 E-value=1.1e+02 Score=22.78 Aligned_cols=62 Identities=16% Similarity=0.207 Sum_probs=39.8
Q ss_pred ECCEEEEeccCCcEEEEECCCCccceEeecccccCCcceeeEEeeeeeEEEEEecCCCceeeeeecC
Q 039692 47 ANGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTGLSGTGIVVNVTVAVVVAVSRSNGELVWSTQID 113 (417)
Q Consensus 47 ~~g~v~v~~~~g~l~ald~~tG~~~W~~~~~~~~~~~p~~~v~~~~v~~l~ald~~tG~~~W~~~~~ 113 (417)
.+..-++...||.|.-++ .++++|......+.. .++- ..=...|.|+.+| .+|+++|.....
T Consensus 18 sg~y~l~~q~DgNLvly~--~~~~vW~ant~~~~~-~~~~-L~l~~dGnLvL~d-~~~~~vWss~t~ 79 (105)
T 4h3o_A 18 VEPYHFIMQDDCNLVLYD--HSTSTWASNTEIGGK-SGCS-AVLQSDGNFVVYD-SSGRSLWASHST 79 (105)
T ss_dssp ETTEEEEECTTSCEEEEE--TTEEEEECCCCCTTC-CSCE-EEECTTSCEEEEC-TTCCEEEECCCC
T ss_pred ECCEEEEECCCCeEEEEE--CCEEEEEecCCCCCC-ccEE-EEEeCCccEEEEC-CCcEEEEEecCC
Confidence 355555556789998888 468899987764322 1221 1111238888888 578999987753
No 306
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=38.90 E-value=83 Score=29.60 Aligned_cols=56 Identities=20% Similarity=0.312 Sum_probs=38.6
Q ss_pred CCEEEEeccCCcEEEEECCCCccceEeecccccCCcceeeEEeeeeeEEEEEecCCCcee
Q 039692 48 NGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTGLSGTGIVVNVTVAVVVAVSRSNGELV 107 (417)
Q Consensus 48 ~g~v~v~~~~g~l~ald~~tG~~~W~~~~~~~~~~~p~~~v~~~~v~~l~ald~~tG~~~ 107 (417)
-|.+|+-+..|.+|-+|.+||..+.+.+.....-... ......+.+++++ +.|.++
T Consensus 271 ygviyviTK~G~ihlyDleTgt~i~~nrIS~d~iF~t---a~~~~~~Gi~~Vn-r~GqVl 326 (365)
T 2xzh_A 271 HDVVFLITKYGYIHLYDLETGTCIYMNRISGETIFVT---APHEATAGIIGVN-RKGQVL 326 (365)
T ss_dssp TTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEE---EEEGGGTEEEEEE-TTCEEE
T ss_pred CCEEEEEeCCcEEEEEEcccCcEEEEeccCCCceEEe---cccCCCCcEEEEc-CCCEEE
Confidence 4789999999999999999999999988875321100 1111225667777 456654
No 307
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=38.77 E-value=66 Score=30.61 Aligned_cols=67 Identities=13% Similarity=0.109 Sum_probs=42.6
Q ss_pred CCeEEEEECCCC--ceEEEecCCCCcceeeeccCCCCCCCCCCCCCCCccCCCceEEEEecC------CeeeeEEEEEc-
Q 039692 221 ANSIVALDIDSG--RIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTISTN------GRFRDVVVAVQ- 291 (417)
Q Consensus 221 ~~~l~ald~~tG--~~~W~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~p~v~~~~~~------G~~~~~v~~~~- 291 (417)
.-+|+++|.+|+ +++-++..+....- ..-.+.++.++ .-.+..+|+++
T Consensus 122 ~pkLv~~DL~t~~~~li~~y~~p~~~~~-----------------------~~S~l~di~VD~~~~~~~c~~~~aYItD~ 178 (381)
T 3q6k_A 122 RPAIVAYDLKQPNYPEVVRYYFPTRLVE-----------------------KPTYFGGFAVDVANPKGDCSETFVYITNF 178 (381)
T ss_dssp CCEEEEEESSSTTCCEEEEEECCGGGCC-----------------------CGGGEEEEEEEESCTTTTSCSEEEEEEET
T ss_pred CceEEEEECCCCCceeEEEEECCHHhcc-----------------------cCCccceEEEecccCCCCCCccEEEEEcC
Confidence 358999999999 99999888643210 11122333322 01146788886
Q ss_pred ccceEEEEECCCCcEEEEee
Q 039692 292 KSGFAWAFDRDSGDIIWFKL 311 (417)
Q Consensus 292 ~~G~l~ald~~tG~~lW~~~ 311 (417)
..+.|.++|.++|+- |+..
T Consensus 179 ~~~gLIVydl~~~~s-wRv~ 197 (381)
T 3q6k_A 179 LRGALFIYDHKKQDS-WNVT 197 (381)
T ss_dssp TTTEEEEEETTTTEE-EEEE
T ss_pred CCCcEEEEECCCCcE-EEEc
Confidence 357899999998864 4444
No 308
>1b2p_A Protein (lectin); mannose-binding lectin, monocot, aglutinin, bluebell bulbs, carbohydrate interactions, sugar binding protein; 1.70A {Hyacinthoides hispanica} SCOP: b.78.1.1
Probab=37.24 E-value=1.4e+02 Score=22.89 Aligned_cols=20 Identities=15% Similarity=0.483 Sum_probs=15.5
Q ss_pred CCCeEEEEECCCCceEEEecC
Q 039692 220 YANSIVALDIDSGRIAWAKPL 240 (417)
Q Consensus 220 ~~~~l~ald~~tG~~~W~~~~ 240 (417)
.+|.|+..| .+|+++|+-..
T Consensus 69 ~dGNLVl~d-~~~~~lW~S~~ 88 (119)
T 1b2p_A 69 PDGVLVVIT-NENVTVWQSPV 88 (119)
T ss_dssp TTSCEEEEC-TTCCEEEECSC
T ss_pred cCCEEEEEe-CCCcEEEcCCC
Confidence 468888888 57899998654
No 309
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=36.15 E-value=2.4e+02 Score=28.81 Aligned_cols=110 Identities=9% Similarity=-0.012 Sum_probs=59.3
Q ss_pred CCEEEEeccC---CcEEEEECCCCccceEeeccc-----ccCCcceeeE-E---------eee-------eeEEEEEecC
Q 039692 48 NGVVYFPSWN---GYLYAVNAFNGALIWEQNLSK-----LTGLSGTGIV-V---------NVT-------VAVVVAVSRS 102 (417)
Q Consensus 48 ~g~v~v~~~~---g~l~ald~~tG~~~W~~~~~~-----~~~~~p~~~v-~---------~~~-------v~~l~ald~~ 102 (417)
+++||+.... +.++.+|.++. .|+.-... ...... .++ . .|. ...++++|.+
T Consensus 500 ~~~iyv~GG~~~~~~v~~yd~~t~--~W~~~~~~g~~p~~r~~~~-a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~ 576 (695)
T 2zwa_A 500 DGNVLILGGVTEGPAMLLYNVTEE--IFKDVTPKDEFFQNSLVSA-GLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYD 576 (695)
T ss_dssp TSCEEEECCBCSSCSEEEEETTTT--EEEECCCSSGGGGSCCBSC-EEEEETTTTEEEEECCBCTTSSCBCCEEEEEEEC
T ss_pred CCEEEEECCCCCCCCEEEEECCCC--ceEEccCCCCCCCccccee-EEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEcc
Confidence 8888877532 27999998765 48865431 111111 112 2 111 1568999988
Q ss_pred CCc----eeeeeecCCCCCcceeeceeEEc-CeEEEEeCCccCccccCcccCCCceEEEEeCCCCceece
Q 039692 103 NGE----LVWSTQIDPRPRSQITMSGSVYM-GAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQ 167 (417)
Q Consensus 103 tG~----~~W~~~~~~~~~~~~~~sp~v~~-~~v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~~~W~ 167 (417)
+.+ +.|+.-...........+.++.+ +.+|+........ .......++++|+++. .|+
T Consensus 577 ~~~w~~~~~W~~~~~~p~~~R~~~~~~~~~~~~iyv~GG~~~~~-----~~~~~~~v~~yd~~t~--~W~ 639 (695)
T 2zwa_A 577 AENATEPITVIKKLQHPLFQRYGSQIKYITPRKLLIVGGTSPSG-----LFDRTNSIISLDPLSE--TLT 639 (695)
T ss_dssp TTCSSCCEEEEEEEECGGGCCBSCEEEEEETTEEEEECCBCSSC-----CCCTTTSEEEEETTTT--EEE
T ss_pred CCccccceEEEEcCCCCCCCcccceEEEeCCCEEEEECCccCCC-----CCCCCCeEEEEECCCC--eEE
Confidence 776 45765422101111223334566 8888754321110 0012467999999866 587
No 310
>2jxw_A WW domain-binding protein 4; WW domain containing protein, FBP21, WBP4, metal- binding, mRNA processing, mRNA splicing, nucleus, polymorphism; NMR {Homo sapiens}
Probab=35.56 E-value=1.1e+02 Score=21.48 Aligned_cols=19 Identities=16% Similarity=0.295 Sum_probs=16.5
Q ss_pred CceEEEEeCCCCceeceee
Q 039692 151 RGSLAKLDVRNGRIIWQTY 169 (417)
Q Consensus 151 ~g~l~ald~~tG~~~W~~~ 169 (417)
+|+.|-+|..|++..|..+
T Consensus 55 ~Gr~YyyN~~T~~s~We~P 73 (75)
T 2jxw_A 55 DGFTYYYNTETGESRWEKP 73 (75)
T ss_dssp TTEEEEEETTTTEEESSCC
T ss_pred CCCEEEEECcCCCEeccCc
Confidence 5899999999999999754
No 311
>3r0e_B Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara}
Probab=35.02 E-value=1.4e+02 Score=22.40 Aligned_cols=22 Identities=18% Similarity=0.196 Sum_probs=16.6
Q ss_pred EcccceEEEEECCCCcEEEEeec
Q 039692 290 VQKSGFAWAFDRDSGDIIWFKLA 312 (417)
Q Consensus 290 ~~~~G~l~ald~~tG~~lW~~~~ 312 (417)
-..+|.|+.+|. +|+.+|+...
T Consensus 60 l~~dGNLvl~d~-~~~~iW~S~t 81 (110)
T 3r0e_B 60 LNHKGELIIKDD-DFKTIWSSRS 81 (110)
T ss_dssp ECTTSCEEEECT-TCCEEEECCC
T ss_pred EeCCCcEEEEeC-CCCEEEEcCC
Confidence 346788888874 6789998775
No 312
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=34.23 E-value=2.8e+02 Score=25.49 Aligned_cols=24 Identities=13% Similarity=-0.036 Sum_probs=12.0
Q ss_pred EEEeccCCcEEEEECCCCccceEe
Q 039692 51 VYFPSWNGYLYAVNAFNGALIWEQ 74 (417)
Q Consensus 51 v~v~~~~g~l~ald~~tG~~~W~~ 74 (417)
+..++.++.+..+|.++++...+.
T Consensus 202 l~~~~~d~~v~~wd~~t~~~~~~~ 225 (393)
T 4gq1_A 202 LIVGERNGNIRIFDWTLNLSAEEN 225 (393)
T ss_dssp EEEEETTSEEEEEETTCCC-----
T ss_pred EEecCCCCEEEEEECCCCcccccc
Confidence 445556666777776666654443
No 313
>2dpf_A Curculin; sweet taste, taste modifying, plant protein; 1.50A {Curculigo latifolia} PDB: 2d04_B* 2d04_A*
Probab=33.86 E-value=1.5e+02 Score=22.35 Aligned_cols=20 Identities=15% Similarity=0.310 Sum_probs=15.3
Q ss_pred CCCeEEEEECCCCceEEEecC
Q 039692 220 YANSIVALDIDSGRIAWAKPL 240 (417)
Q Consensus 220 ~~~~l~ald~~tG~~~W~~~~ 240 (417)
.+|.|+..|. +|+++|+...
T Consensus 59 ~~GnLvl~d~-~~~~vW~S~~ 78 (115)
T 2dpf_A 59 SDGNLVIYDH-NNNDVWGSAC 78 (115)
T ss_dssp TTSCEEEECT-TCCEEEECCC
T ss_pred CCCcEEEECC-CceEEEEcCC
Confidence 4688988884 6899998544
No 314
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=33.77 E-value=1.7e+02 Score=28.75 Aligned_cols=106 Identities=8% Similarity=-0.022 Sum_probs=58.1
Q ss_pred CCEEEEeccCCcEEEEECCCCcc-ceEeeccc-ccC-----Cccee--e-EEeeeeeEEEEEecCCCceeeeee--cCCC
Q 039692 48 NGVVYFPSWNGYLYAVNAFNGAL-IWEQNLSK-LTG-----LSGTG--I-VVNVTVAVVVAVSRSNGELVWSTQ--IDPR 115 (417)
Q Consensus 48 ~g~v~v~~~~g~l~ald~~tG~~-~W~~~~~~-~~~-----~~p~~--~-v~~~~v~~l~ald~~tG~~~W~~~--~~~~ 115 (417)
++.|+.++.+|.|..+|.++++. +....... .+. .+|.+ + +.....+.+...|..+++..-... ....
T Consensus 277 ~~~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~~~~ 356 (524)
T 2j04_B 277 PTTVVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRFRGS 356 (524)
T ss_dssp SSEEEEEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEEEECSCC
T ss_pred CCeEEEEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCcccccccccccC
Confidence 46788888999999999988853 33333221 111 11211 1 222234788888887776543322 1100
Q ss_pred CCcceeeceeEEcCeEEEEeCCccCccccCcccCCCceEEEEeCCCCceeceee
Q 039692 116 PRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTY 169 (417)
Q Consensus 116 ~~~~~~~sp~v~~~~v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~~~W~~~ 169 (417)
....+..+| ++..++..+. ++.+..+|.++++.+..+.
T Consensus 357 ~v~~v~fsp---~~~~l~s~~~-------------d~tv~lwd~~~~~~~~~l~ 394 (524)
T 2j04_B 357 NLVPVVYCP---QIYSYIYSDG-------------ASSLRAVPSRAAFAVHPLV 394 (524)
T ss_dssp SCCCEEEET---TTTEEEEECS-------------SSEEEEEETTCTTCCEEEE
T ss_pred cccceEeCC---CcCeEEEeCC-------------CCcEEEEECcccccceeee
Confidence 011233344 3444444432 5789999999888765543
No 315
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=33.65 E-value=2e+02 Score=29.41 Aligned_cols=98 Identities=16% Similarity=0.049 Sum_probs=51.4
Q ss_pred CCEEEEeccCCcEEEEECCCCccceEeeccc--c-------cCCccee--eEE--e-e------eeeEEEEEecCCCcee
Q 039692 48 NGVVYFPSWNGYLYAVNAFNGALIWEQNLSK--L-------TGLSGTG--IVV--N-V------TVAVVVAVSRSNGELV 107 (417)
Q Consensus 48 ~g~v~v~~~~g~l~ald~~tG~~~W~~~~~~--~-------~~~~p~~--~v~--~-~------~v~~l~ald~~tG~~~ 107 (417)
++.+++.+ ++.|+.+|.++|+..=-++... . ...+|-+ ++. + . ..+.++.+|.++|+..
T Consensus 27 dg~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~~ 105 (740)
T 4a5s_A 27 DHEYLYKQ-ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLI 105 (740)
T ss_dssp SSEEEEEE-TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEEC
T ss_pred CCcEEEEc-CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEEEEEECCCCcEE
Confidence 44555544 7899999999988531111111 0 1124432 111 1 1 1278899999999864
Q ss_pred eeeecCCCCCcceeeceeEEcCe-EEEEeCCccCccccCcccCCCceEEEEeCCCCcee
Q 039692 108 WSTQIDPRPRSQITMSGSVYMGA-FYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRII 165 (417)
Q Consensus 108 W~~~~~~~~~~~~~~sp~v~~~~-v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~~~ 165 (417)
- ............-+| +++ |.+.. ++.|+..|..+|+++
T Consensus 106 ~-l~~~~~~~~~~~~SP---dG~~la~~~---------------~~~i~~~~~~~~~~~ 145 (740)
T 4a5s_A 106 T-EERIPNNTQWVTWSP---VGHKLAYVW---------------NNDIYVKIEPNLPSY 145 (740)
T ss_dssp C-SSCCCTTEEEEEECS---STTCEEEEE---------------TTEEEEESSTTSCCE
T ss_pred E-cccCCCcceeeEECC---CCCEEEEEE---------------CCeEEEEECCCCceE
Confidence 3 221111111233344 444 44433 368999998887643
No 316
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=33.42 E-value=3.6e+02 Score=27.14 Aligned_cols=108 Identities=15% Similarity=0.139 Sum_probs=54.0
Q ss_pred cEEECCEEEEecc----CCcEEEEECCCCcc-ceEeecccccCCcceee-EEee---------eeeEEEEEecCCCceee
Q 039692 44 PAVANGVVYFPSW----NGYLYAVNAFNGAL-IWEQNLSKLTGLSGTGI-VVNV---------TVAVVVAVSRSNGELVW 108 (417)
Q Consensus 44 p~~~~g~v~v~~~----~g~l~ald~~tG~~-~W~~~~~~~~~~~p~~~-v~~~---------~v~~l~ald~~tG~~~W 108 (417)
|+..+|.+|+.+. ++.|+.+|.++++. .|+.-+...-......+ ..++ ...+|+.+|.. |+..-
T Consensus 277 ~~~~~g~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~lv~~~~~dg~~~l~~~~~~-g~~~~ 355 (695)
T 2bkl_A 277 VHAWKDRFYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIVGGHLSLEYLKDATSEVRVATLK-GKPVR 355 (695)
T ss_dssp EEEETTEEEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEETTEEEEEEEETTEEEEEEEETT-CCEEE
T ss_pred EEecCCcEEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEECCEEEEEEEECCEEEEEEEeCC-CCeeE
Confidence 3334555666553 57899999988763 47654432101000000 1111 12677777753 55544
Q ss_pred eeecCCCC-CcceeeceeEEcCeEEEEeCCccCccccCcccCCCceEEEEeCCCCce
Q 039692 109 STQIDPRP-RSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRI 164 (417)
Q Consensus 109 ~~~~~~~~-~~~~~~sp~v~~~~v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~~ 164 (417)
+..++... ...+..+| .++.+++..++.. ..+.|+.+|.++|+.
T Consensus 356 ~l~~~~~~~v~~~~~s~--d~~~l~~~~ss~~----------~P~~v~~~d~~~g~~ 400 (695)
T 2bkl_A 356 TVQLPGVGAASNLMGLE--DLDDAYYVFTSFT----------TPRQIYKTSVSTGKS 400 (695)
T ss_dssp ECCCSSSSEECCCBSCT--TCSEEEEEEEETT----------EEEEEEEEETTTCCE
T ss_pred EecCCCCeEEEEeecCC--CCCEEEEEEcCCC----------CCCEEEEEECCCCcE
Confidence 44433111 01122233 2345555443211 146899999998874
No 317
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=32.74 E-value=2.5e+02 Score=24.47 Aligned_cols=21 Identities=19% Similarity=0.218 Sum_probs=17.1
Q ss_pred CEEEEeccCCcEEEEECCCCc
Q 039692 49 GVVYFPSWNGYLYAVNAFNGA 69 (417)
Q Consensus 49 g~v~v~~~~g~l~ald~~tG~ 69 (417)
..++.++.|+.|...|.++|+
T Consensus 68 ~~l~s~s~D~~v~iWd~~~~~ 88 (297)
T 2pm7_B 68 TILASCSYDGKVMIWKEENGR 88 (297)
T ss_dssp SEEEEEETTTEEEEEEBSSSC
T ss_pred CEEEEEcCCCEEEEEEcCCCc
Confidence 467777889999999998875
No 318
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=32.22 E-value=2.8e+02 Score=25.47 Aligned_cols=101 Identities=16% Similarity=0.147 Sum_probs=0.0
Q ss_pred eeeEEEEEcccceEEEEECCCCcEEEEeecCCCCCCCcceecccccCC-----eEEEEec--cCC----ceeeeecCCCC
Q 039692 283 FRDVVVAVQKSGFAWAFDRDSGDIIWFKLAGPGGREGGGVWGAATDGR-----RVYTNIV--NND----RIIWSTADPSN 351 (417)
Q Consensus 283 ~~~~v~~~~~~G~l~ald~~tG~~lW~~~~~~~~~~g~~~~~~~~~~~-----~vy~~~~--~~~----~~~W~~~~~~~ 351 (417)
.+..||++...|+|+.+| .+|+ .=...++...........++++.+ .||+... ... ..+++++.
T Consensus 38 pdG~l~V~e~~g~I~~~d-~~G~-~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~v~r~~~--- 112 (354)
T 3a9g_A 38 GGGRYLVTERPGRLVLIS-PSGK-KLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNRVIRGRL--- 112 (354)
T ss_dssp ETTEEEEEETTTEEEEEC-SSCE-EEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEEEEEEEE---
T ss_pred CCCeEEEEeCCCEEEEEe-CCCc-eEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceEEEEEEE---
Q ss_pred CCCccceeeeCCeEEeccCCCC----CCeecccccccCCeEEEecC
Q 039692 352 ETAHGPVTVVNGVLFAGSVSAN----GSTVYGGVPASYGCIYLGNG 393 (417)
Q Consensus 352 ~~~~~p~~~~~~~v~~~~~~g~----g~~~~~sp~~~~g~lyv~~~ 393 (417)
.....-+ .....++.+-..+. +...++. ||+||++.|
T Consensus 113 ~~~~~~~-~~~~~l~~~~~~~~~h~~~~l~~~p----DG~Lyvt~G 153 (354)
T 3a9g_A 113 DGSTFKL-KEVKTLIDGIPGAYIHNGGRIRFGP----DGMLYITTG 153 (354)
T ss_dssp CSSSCCE-EEEEEEEEEEECCSSCCCCCEEECT----TSCEEEECC
T ss_pred CCCCcCc-CccEEEEEcCCCCCCcCCceEEECC----CCcEEEEEC
No 319
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=31.59 E-value=98 Score=29.11 Aligned_cols=30 Identities=27% Similarity=0.551 Sum_probs=28.0
Q ss_pred eeEEEEEcccceEEEEECCCCcEEEEeecC
Q 039692 284 RDVVVAVQKSGFAWAFDRDSGDIIWFKLAG 313 (417)
Q Consensus 284 ~~~v~~~~~~G~l~ald~~tG~~lW~~~~~ 313 (417)
-++||+.++-|.+|.+|.+||..+...++.
T Consensus 271 ygviyviTK~G~ihlyDleTgt~i~~nrIS 300 (365)
T 2xzh_A 271 HDVVFLITKYGYIHLYDLETGTCIYMNRIS 300 (365)
T ss_dssp TTEEEEEETTSEEEEEETTTCCEEEEEECC
T ss_pred CCEEEEEeCCcEEEEEEcccCcEEEEeccC
Confidence 568999999999999999999999999975
No 320
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=29.40 E-value=3e+02 Score=28.11 Aligned_cols=104 Identities=13% Similarity=0.087 Sum_probs=51.9
Q ss_pred ECCEEEEecc----CCcEEEEECCCCccceEeecccccCCcceee-EEee-e--------eeEEEEEecCCCceeeeeec
Q 039692 47 ANGVVYFPSW----NGYLYAVNAFNGALIWEQNLSKLTGLSGTGI-VVNV-T--------VAVVVAVSRSNGELVWSTQI 112 (417)
Q Consensus 47 ~~g~v~v~~~----~g~l~ald~~tG~~~W~~~~~~~~~~~p~~~-v~~~-~--------v~~l~ald~~tG~~~W~~~~ 112 (417)
.++.+|+.+. ++.|+.+|.++++..|+.-+...... ...+ ..++ . ..+|+.+|. +|+..-+..+
T Consensus 326 dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~-l~~~~~~~~~lv~~~~~dg~~~l~~~~~-~g~~~~~l~~ 403 (741)
T 1yr2_A 326 VGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKDN-LESVGIAGNRLFASYIHDAKSQVLAFDL-DGKPAGAVSL 403 (741)
T ss_dssp ETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSSE-EEEEEEEBTEEEEEEEETTEEEEEEEET-TSCEEEECBC
T ss_pred cCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCCCCe-EEEEEEECCEEEEEEEECCEEEEEEEeC-CCCceeeccC
Confidence 4667777764 45699999877533455444321110 0010 1111 1 167788886 4555544443
Q ss_pred CCCC-CcceeeceeEEcCeEEEEeCCccCccccCcccCCCceEEEEeCCCCce
Q 039692 113 DPRP-RSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRI 164 (417)
Q Consensus 113 ~~~~-~~~~~~sp~v~~~~v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~~ 164 (417)
+... ...+..+| .++.+++..++. +..+.|+.+|..+|+.
T Consensus 404 ~~~~~v~~~~~s~--d~~~l~~~~ss~----------~~P~~i~~~d~~tg~~ 444 (741)
T 1yr2_A 404 PGIGSASGLSGRP--GDRHAYLSFSSF----------TQPATVLALDPATAKT 444 (741)
T ss_dssp SSSCEEEEEECCB--TCSCEEEEEEET----------TEEEEEEEEETTTTEE
T ss_pred CCCeEEEEeecCC--CCCEEEEEEcCC----------CCCCEEEEEECCCCcE
Confidence 2211 01122222 233455544321 1147899999998874
No 321
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=28.70 E-value=3.7e+02 Score=25.15 Aligned_cols=20 Identities=15% Similarity=0.160 Sum_probs=13.9
Q ss_pred CceEEEEeCC-CCceeceeee
Q 039692 151 RGSLAKLDVR-NGRIIWQTYM 170 (417)
Q Consensus 151 ~g~l~ald~~-tG~~~W~~~~ 170 (417)
+..+..+|.+ +.+.+=++..
T Consensus 253 ~~s~~Vydr~~~~~~vg~f~I 273 (355)
T 3amr_A 253 NSSYAIYDRQGKNKYVADFRI 273 (355)
T ss_dssp GTEEEEEESSTTCCEEEEEEE
T ss_pred CCEEEEEECCCCCcEEEEEEe
Confidence 4678888886 6666666655
No 322
>2jxw_A WW domain-binding protein 4; WW domain containing protein, FBP21, WBP4, metal- binding, mRNA processing, mRNA splicing, nucleus, polymorphism; NMR {Homo sapiens}
Probab=28.32 E-value=94 Score=21.76 Aligned_cols=60 Identities=22% Similarity=0.346 Sum_probs=38.2
Q ss_pred CCeEEEEECCCCceEEEecCCCCcceeeeccCCCCCCCCCCCCCCCccCCCceEEEEecCCeeeeEEEEEcccceEEEEE
Q 039692 221 ANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFD 300 (417)
Q Consensus 221 ~~~l~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~p~v~~~~~~G~~~~~v~~~~~~G~l~ald 300 (417)
+|.+|=+|..||+-.|..+....... . ....+. .-.-..+.+|+.|-++
T Consensus 14 ~G~~YYyN~~T~~s~We~P~~~~~~~------------------e--~~~~~~-----------~W~~~~~~~Gr~YyyN 62 (75)
T 2jxw_A 14 EGYHYYYDLISGASQWEKPEGFQGDL------------------K--KTAVKT-----------VWVEGLSEDGFTYYYN 62 (75)
T ss_dssp TTEEEEEETTTTEEECSCCSSCSSCC------------------S--SSSCCC-----------SEEEEEETTTEEEEEE
T ss_pred CCCEEEEECCCCCEeecCCCcccccc------------------c--ccCCCc-----------cEEEEECCCCCEEEEE
Confidence 47888899999999997765321100 0 000111 1122244589999999
Q ss_pred CCCCcEEEEee
Q 039692 301 RDSGDIIWFKL 311 (417)
Q Consensus 301 ~~tG~~lW~~~ 311 (417)
..|++-.|+..
T Consensus 63 ~~T~~s~We~P 73 (75)
T 2jxw_A 63 TETGESRWEKP 73 (75)
T ss_dssp TTTTEEESSCC
T ss_pred CcCCCEeccCc
Confidence 99999999764
No 323
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=28.29 E-value=3.9e+02 Score=25.33 Aligned_cols=18 Identities=17% Similarity=0.154 Sum_probs=13.9
Q ss_pred CCCeEEEEECCCCceEEE
Q 039692 220 YANSIVALDIDSGRIAWA 237 (417)
Q Consensus 220 ~~~~l~ald~~tG~~~W~ 237 (417)
..+.|+.+|+++|++...
T Consensus 248 ~~~~V~~~d~~~g~~~~~ 265 (433)
T 4hw6_A 248 HHAMISSYDPATGTLTEE 265 (433)
T ss_dssp TCSEEEEECTTTCCEEEE
T ss_pred CCCEEEEEECCCCeEEEE
Confidence 457899999998987443
No 324
>3r0e_A Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara}
Probab=26.16 E-value=1.6e+02 Score=22.09 Aligned_cols=20 Identities=15% Similarity=0.237 Sum_probs=14.9
Q ss_pred CCCeEEEEECCCCceEEEecC
Q 039692 220 YANSIVALDIDSGRIAWAKPL 240 (417)
Q Consensus 220 ~~~~l~ald~~tG~~~W~~~~ 240 (417)
.+|.|+.+|. +++.+|+...
T Consensus 57 ~dGnLvl~d~-~~~~vWss~t 76 (109)
T 3r0e_A 57 DYGELVIKNG-DGSTVWKSGA 76 (109)
T ss_dssp TTSCEEEECT-TSCEEEECCC
T ss_pred CCCeEEEEeC-CCCEEEcCCC
Confidence 4678888885 6899996543
No 325
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=25.83 E-value=3.8e+02 Score=24.42 Aligned_cols=60 Identities=15% Similarity=0.185 Sum_probs=32.1
Q ss_pred EEEEEcccceEEEEECCCCcEEEEeecCCCCCCC-cceeccccc-----CCeEEEEeccCC----ceeeeecC
Q 039692 286 VVVAVQKSGFAWAFDRDSGDIIWFKLAGPGGREG-GGVWGAATD-----GRRVYTNIVNND----RIIWSTAD 348 (417)
Q Consensus 286 ~v~~~~~~G~l~ald~~tG~~lW~~~~~~~~~~g-~~~~~~~~~-----~~~vy~~~~~~~----~~~W~~~~ 348 (417)
.+|++...|+|+.++ +|+..=..+.+ ....+ ....+++++ ++.||+.+.... ..+++++.
T Consensus 43 ~l~V~e~~g~I~~i~--~g~~~~~~~~~-v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~r~~~ 112 (352)
T 2ism_A 43 GMLIAERPGRIRLFR--EGRLSTYAELS-VYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVVRLRH 112 (352)
T ss_dssp CEEEEETTTEEEEEE--TTEEEEEEECC-CCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEEEEEEE
T ss_pred eEEEEeCCCeEEEEE--CCCccEeecce-EeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEEEEEEe
Confidence 378888889999999 56532111111 00111 112234444 469999886431 45566554
No 326
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=25.54 E-value=3.8e+02 Score=24.34 Aligned_cols=57 Identities=12% Similarity=-0.075 Sum_probs=31.3
Q ss_pred eEEEEEc-ccceEEEEECCCCcEEEEeecCCCCCCCcceecccccCCeEEEEeccCCceeeeec
Q 039692 285 DVVVAVQ-KSGFAWAFDRDSGDIIWFKLAGPGGREGGGVWGAATDGRRVYTNIVNNDRIIWSTA 347 (417)
Q Consensus 285 ~~v~~~~-~~G~l~ald~~tG~~lW~~~~~~~~~~g~~~~~~~~~~~~vy~~~~~~~~~~W~~~ 347 (417)
+.||+.+ ..+.|+.+|.+.....-....+ ...-.+++++++.+|+.+...+++ ++.+
T Consensus 215 ~~lY~aD~~~~~I~~~~~dG~~~~~~~~~~-----~~~P~giav~~~~ly~td~~~~~V-~~~~ 272 (349)
T 3v64_C 215 RRMYWVDAKHHVIERANLDGSHRKAVISQG-----LPHPFAITVFEDSLYWTDWHTKSI-NSAN 272 (349)
T ss_dssp TEEEEEETTTTEEEEEETTSCSCEEEECSS-----CSSEEEEEEETTEEEEEETTTTEE-EEEE
T ss_pred CEEEEEECCCCEEEEEeCCCCceEEEEeCC-----CCCceEEEEECCEEEEecCCCCeE-EEEE
Confidence 3566553 4567888886533221111111 122235667889999998766543 4444
No 327
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=25.48 E-value=4.2e+02 Score=24.72 Aligned_cols=59 Identities=19% Similarity=0.086 Sum_probs=32.4
Q ss_pred eEEEEEc-ccceEEEEECCCCcEEEEeecCCCCCCCcceecccccCCeEEEEeccCCceeeeec
Q 039692 285 DVVVAVQ-KSGFAWAFDRDSGDIIWFKLAGPGGREGGGVWGAATDGRRVYTNIVNNDRIIWSTA 347 (417)
Q Consensus 285 ~~v~~~~-~~G~l~ald~~tG~~lW~~~~~~~~~~g~~~~~~~~~~~~vy~~~~~~~~~~W~~~ 347 (417)
+.||+++ ....|..+|.+ |..+...-..+. .. ..-.+++++++.+|..+...+ .+++.+
T Consensus 258 ~~lY~aD~~~~~I~~~d~d-G~~~~~~~~~~~-~l-~~P~gl~v~~~~lywtd~~~~-~V~~~~ 317 (400)
T 3p5b_L 258 GRLYWVDSKLHSISSIDVN-GGNRKTILEDEK-RL-AHPFSLAVFEDKVFWTDIINE-AIFSAN 317 (400)
T ss_dssp TEEEEEETTTTEEEEEETT-SCCCEEEEECSS-TT-SSEEEEEEETTEEEEEESSSC-SEEEEE
T ss_pred CEEEEEECCCCEEEEEeCC-CCccEEEEeCCC-CC-CCCEEEEEeCCEEEEecCCCC-eEEEEE
Confidence 4566663 45678888865 433333322111 01 122356778899999985544 455554
No 328
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=25.38 E-value=1.8e+02 Score=28.57 Aligned_cols=56 Identities=20% Similarity=0.312 Sum_probs=38.5
Q ss_pred CCEEEEeccCCcEEEEECCCCccceEeecccccCCcceeeEEeeeeeEEEEEecCCCcee
Q 039692 48 NGVVYFPSWNGYLYAVNAFNGALIWEQNLSKLTGLSGTGIVVNVTVAVVVAVSRSNGELV 107 (417)
Q Consensus 48 ~g~v~v~~~~g~l~ald~~tG~~~W~~~~~~~~~~~p~~~v~~~~v~~l~ald~~tG~~~ 107 (417)
-|.+|+-+..|.++-+|.+||..+...++....-... ......+.+++++ +.|.++
T Consensus 270 ygviyviTK~G~i~lyDleTgt~i~~nrIs~~~iF~t---~~~~~~~Gi~~Vn-r~GqVl 325 (494)
T 1bpo_A 270 HDVVFLITKYGYIHLYDLETGTCIYMNRISGETIFVT---APHEATAGIIGVN-RKGQVL 325 (494)
T ss_dssp TTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEE---EEETTTTEEEEEE-TTCEEE
T ss_pred CCEEEEEecCceEEEEecccceeeeeecccCCceEEe---cccCCCCcEEEEc-cCceEE
Confidence 4789999999999999999999999988764311100 1111226667777 457664
No 329
>3mez_A Mannose-specific lectin 3 chain 1; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0
Probab=25.01 E-value=2.2e+02 Score=21.35 Aligned_cols=22 Identities=14% Similarity=0.205 Sum_probs=14.2
Q ss_pred cccceEEEEECCCCcEEEEeec
Q 039692 291 QKSGFAWAFDRDSGDIIWFKLA 312 (417)
Q Consensus 291 ~~~G~l~ald~~tG~~lW~~~~ 312 (417)
..+|.|+.+|......+|+...
T Consensus 57 ~~dGNLVl~~~~~~~~vW~S~t 78 (111)
T 3mez_A 57 NNRGQLEIHSANSNTPVWVYPR 78 (111)
T ss_dssp CTTSCEEEECSSCSSCSEEESS
T ss_pred cCCCcEEEEeCCCCEEEEEecc
Confidence 4577777777543345897664
No 330
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=24.89 E-value=5.6e+02 Score=26.03 Aligned_cols=43 Identities=14% Similarity=-0.164 Sum_probs=23.9
Q ss_pred ceEEEEECCCCc----EEEEeecCCCCCCCcceecccccC-CeEEEEec
Q 039692 294 GFAWAFDRDSGD----IIWFKLAGPGGREGGGVWGAATDG-RRVYTNIV 337 (417)
Q Consensus 294 G~l~ald~~tG~----~lW~~~~~~~~~~g~~~~~~~~~~-~~vy~~~~ 337 (417)
..++++|+.+.+ +.|+.-...+ ...+.....++.+ +.+|+...
T Consensus 568 ~~v~~yd~~~~~w~~~~~W~~~~~~p-~~~R~~~~~~~~~~~~iyv~GG 615 (695)
T 2zwa_A 568 DKAIIFKYDAENATEPITVIKKLQHP-LFQRYGSQIKYITPRKLLIVGG 615 (695)
T ss_dssp CEEEEEEECTTCSSCCEEEEEEEECG-GGCCBSCEEEEEETTEEEEECC
T ss_pred CcEEEEEccCCccccceEEEEcCCCC-CCCcccceEEEeCCCEEEEECC
Confidence 469999998876 4576653210 1112222233344 88888754
No 331
>2dpf_A Curculin; sweet taste, taste modifying, plant protein; 1.50A {Curculigo latifolia} PDB: 2d04_B* 2d04_A*
Probab=24.02 E-value=2.3e+02 Score=21.27 Aligned_cols=53 Identities=17% Similarity=0.253 Sum_probs=32.2
Q ss_pred EcccceEEEEECCCCcEEEEeecCCCCCCCcceecccccCCeEEEEeccCCceeeeecC
Q 039692 290 VQKSGFAWAFDRDSGDIIWFKLAGPGGREGGGVWGAATDGRRVYTNIVNNDRIIWSTAD 348 (417)
Q Consensus 290 ~~~~G~l~ald~~tG~~lW~~~~~~~~~~g~~~~~~~~~~~~vy~~~~~~~~~~W~~~~ 348 (417)
...+|.++.++ .++.+|......+ +........+++.+.+.+. .++.+|+...
T Consensus 26 ~~~dgnlvly~--~~~~vW~sn~~~~---~~~~~l~l~~~GnLvl~d~-~~~~vW~S~~ 78 (115)
T 2dpf_A 26 IQNKCNLVKYQ--NGRQIWASNTDRR---GSGCRLTLLSDGNLVIYDH-NNNDVWGSAC 78 (115)
T ss_dssp ECTTSCEEEEE--TTEEEEECSCTTS---CSSCEEEECTTSCEEEECT-TCCEEEECCC
T ss_pred EcCCCcEEEEe--CCEEEEeCCCCCC---CCceEEEECCCCcEEEECC-CceEEEEcCC
Confidence 35677787777 4889999875311 1111112235666766664 5679998654
No 332
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=23.53 E-value=1.7e+02 Score=28.63 Aligned_cols=30 Identities=27% Similarity=0.551 Sum_probs=27.9
Q ss_pred eeEEEEEcccceEEEEECCCCcEEEEeecC
Q 039692 284 RDVVVAVQKSGFAWAFDRDSGDIIWFKLAG 313 (417)
Q Consensus 284 ~~~v~~~~~~G~l~ald~~tG~~lW~~~~~ 313 (417)
-++||+.++.|.+|.+|.+||..+...++.
T Consensus 270 ygviyviTK~G~i~lyDleTgt~i~~nrIs 299 (494)
T 1bpo_A 270 HDVVFLITKYGYIHLYDLETGTCIYMNRIS 299 (494)
T ss_dssp TTEEEEEETTSEEEEEETTTCCEEEEEECC
T ss_pred CCEEEEEecCceEEEEecccceeeeeeccc
Confidence 568999999999999999999999999974
No 333
>3r0e_B Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara}
Probab=23.46 E-value=1.6e+02 Score=22.15 Aligned_cols=20 Identities=10% Similarity=0.184 Sum_probs=15.5
Q ss_pred CCCeEEEEECCCCceEEEecC
Q 039692 220 YANSIVALDIDSGRIAWAKPL 240 (417)
Q Consensus 220 ~~~~l~ald~~tG~~~W~~~~ 240 (417)
.+|.|+.+|. +|+++|+...
T Consensus 62 ~dGNLvl~d~-~~~~iW~S~t 81 (110)
T 3r0e_B 62 HKGELIIKDD-DFKTIWSSRS 81 (110)
T ss_dssp TTSCEEEECT-TCCEEEECCC
T ss_pred CCCcEEEEeC-CCCEEEEcCC
Confidence 4688888885 6899998654
No 334
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=22.52 E-value=3.1e+02 Score=25.12 Aligned_cols=18 Identities=6% Similarity=0.123 Sum_probs=14.0
Q ss_pred EEEEcccceEEEEECCCCc
Q 039692 287 VVAVQKSGFAWAFDRDSGD 305 (417)
Q Consensus 287 v~~~~~~G~l~ald~~tG~ 305 (417)
+|+....|+|+.++. +|+
T Consensus 32 l~V~e~~G~i~~~~~-~g~ 49 (353)
T 2g8s_A 32 MLITLRGGELRHWQA-GKG 49 (353)
T ss_dssp EEEEETTTEEEEEET-TTE
T ss_pred EEEEeCCceEEEEeC-CCc
Confidence 777878899999985 454
No 335
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=21.43 E-value=5.9e+02 Score=25.01 Aligned_cols=23 Identities=22% Similarity=0.396 Sum_probs=17.3
Q ss_pred eEEEEEcccc--eEEEEECCCCcEE
Q 039692 285 DVVVAVQKSG--FAWAFDRDSGDII 307 (417)
Q Consensus 285 ~~v~~~~~~G--~l~ald~~tG~~l 307 (417)
++++..+.+| .|+.+|.++|+..
T Consensus 254 ~l~~~~~~~~~~~l~~~~~~~~~~~ 278 (662)
T 3azo_A 254 SLIVATDRTGWWNLHRVDPATGAAT 278 (662)
T ss_dssp CEEEEECTTSSCEEEEECTTTCCEE
T ss_pred eEEEEECCCCCeEEEEEECCCCcee
Confidence 3666677777 8999998888754
No 336
>3mez_A Mannose-specific lectin 3 chain 1; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0
Probab=20.81 E-value=2.7e+02 Score=20.83 Aligned_cols=58 Identities=9% Similarity=0.074 Sum_probs=34.5
Q ss_pred eEEEEEcccceEEEEECCCCcEEEEeecCCCCCCCcceecccccCCeEEEEeccCCceeeeecC
Q 039692 285 DVVVAVQKSGFAWAFDRDSGDIIWFKLAGPGGREGGGVWGAATDGRRVYTNIVNNDRIIWSTAD 348 (417)
Q Consensus 285 ~~v~~~~~~G~l~ald~~tG~~lW~~~~~~~~~~g~~~~~~~~~~~~vy~~~~~~~~~~W~~~~ 348 (417)
...+....||.|...+.. + +|...... .+........+++.+++.+.++...+|....
T Consensus 21 ~~~L~~q~dGnLvl~~~~-~--vW~snt~~---~~~~~~l~l~~dGNLVl~~~~~~~~vW~S~t 78 (111)
T 3mez_A 21 SAAFVMQGDCNLVLYNEA-G--GFQSNTHG---RGVDCTLRLNNRGQLEIHSANSNTPVWVYPR 78 (111)
T ss_dssp TEEEEECTTSCEEEECSS-C--CEECCCTT---SCSSCEEEECTTSCEEEECSSCSSCSEEESS
T ss_pred CEEEEEccCCeEEEECCC-C--EEECCccc---CCcCEEEEEcCCCcEEEEeCCCCEEEEEecc
Confidence 445556788899888754 3 99977531 1111111223566677766655556998763
No 337
>3s9j_A Member of DUF4221 family; 6-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.75A {Bacteroides vulgatus}
Probab=20.53 E-value=5.3e+02 Score=24.11 Aligned_cols=66 Identities=12% Similarity=0.105 Sum_probs=43.3
Q ss_pred EEEEEecCCCceeeeeecCCCCCcc---e-eeceeEEcCeEEEEeCCccCccccCcccCCCceEEEEeCCCCceeceeee
Q 039692 95 VVVAVSRSNGELVWSTQIDPRPRSQ---I-TMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYM 170 (417)
Q Consensus 95 ~l~ald~~tG~~~W~~~~~~~~~~~---~-~~sp~v~~~~v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~~~W~~~~ 170 (417)
.|..+|+++++++=++++..+.... + .+-.+...+.+|+.... ...|+-+|.+ |+++.+++.
T Consensus 53 ~i~~iDL~~~kl~k~i~~ekEGPNgi~~~~~~~~i~~~DsI~i~~~~-------------~~~i~l~n~~-G~~~~k~~~ 118 (369)
T 3s9j_A 53 DIVIFDIENQQIAKRIPLHKTGPNGLPAVFGSRPSPDSQYILVAQNN-------------ISRLSSINSQ-GEIIRNYNF 118 (369)
T ss_dssp EEEEEETTTTEEEEEEECBSSSTTBCTTCCCEEESSSTTSEEEEEGG-------------GTEEEEECTT-CCEEEEEEC
T ss_pred cEEEEECCCCceeeeeccccCCCCCcccceeeEEecCCCEEEEEeCC-------------cceEEEECCC-ceEEEEEec
Confidence 6677777777777777764332111 1 12223457889987643 3589999987 999999988
Q ss_pred cCCC
Q 039692 171 LPDN 174 (417)
Q Consensus 171 ~~~~ 174 (417)
.+..
T Consensus 119 ~~~~ 122 (369)
T 3s9j_A 119 QTPE 122 (369)
T ss_dssp CCTT
T ss_pred CCCc
Confidence 6543
No 338
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=20.02 E-value=5.2e+02 Score=23.89 Aligned_cols=20 Identities=20% Similarity=0.416 Sum_probs=15.9
Q ss_pred CCEEEEec-------------cCCcEEEEECCC
Q 039692 48 NGVVYFPS-------------WNGYLYAVNAFN 67 (417)
Q Consensus 48 ~g~v~v~~-------------~~g~l~ald~~t 67 (417)
+|.+|+++ ..|.|+.+|+++
T Consensus 60 ~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~ 92 (355)
T 3sre_A 60 NGLAFISSGLKYPGIMSFDPDKSGKILLMDLNE 92 (355)
T ss_dssp TSEEEEEECCC-----------CCEEEEEETTS
T ss_pred CCeEEEEeccccCCCcccCCCCCCeEEEEecCC
Confidence 67888886 689999999873
Done!