BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>039694
MDPSKASTALAPSKSSTDSKPKDRDFLNHLEAYLAKRDGVDKLLKLSRYATKIILASSVL
PETLPLTGRLKSFESSVGLSRKAFRLGKFVQDVNALRNSHLDSLSREDLILSVIAYGGEG
LYYFVEQFIWLAKSGLIDPKQSRSLQKISAWAEFIGYIGSISLKFRDLKMILEDEACLAS
TIEIAISRGDGYKEEEQRMKKLKAKKLMKKLSIVQDLADGLMALADIRDGKGMLF

High Scoring Gene Products

Symbol, full name Information P value
PEX11A
AT1G47750
protein from Arabidopsis thaliana 1.8e-71
PEX11B
AT3G47430
protein from Arabidopsis thaliana 4.0e-19
PEX11B
Peroxisomal membrane protein PMP30B
protein from Candida boidinii 4.3e-06
PEX11A
Peroxisomal membrane protein PMP30A
protein from Candida boidinii 5.7e-06
PEX11D
AT2G45740
protein from Arabidopsis thaliana 6.2e-05
Pex11
Peroxin 11
protein from Drosophila melanogaster 0.00015
PEX11C
AT1G01820
protein from Arabidopsis thaliana 0.00044

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  039694
        (235 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2202430 - symbol:PEX11A "AT1G47750" species:37...   723  1.8e-71   1
TAIR|locus:2099590 - symbol:PEX11B "AT3G47430" species:37...   229  4.0e-19   1
UNIPROTKB|Q00317 - symbol:PEX11B "Peroxisomal membrane pr...   125  4.3e-06   1
UNIPROTKB|Q00316 - symbol:PEX11A "Peroxisomal membrane pr...   124  5.7e-06   1
TAIR|locus:2050694 - symbol:PEX11D "AT2G45740" species:37...   115  6.2e-05   1
FB|FBgn0034058 - symbol:Pex11 "Peroxin 11" species:7227 "...   112  0.00015   1
TAIR|locus:2198150 - symbol:PEX11C "AT1G01820" species:37...   108  0.00044   1


>TAIR|locus:2202430 [details] [associations]
            symbol:PEX11A "AT1G47750" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0005778 "peroxisomal membrane"
            evidence=ISS] [GO:0005779 "integral to peroxisomal membrane"
            evidence=IEA;IDA] [GO:0016559 "peroxisome fission"
            evidence=IEA;ISS;IMP] [GO:0007031 "peroxisome organization"
            evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0005777 "peroxisome" evidence=IDA] [GO:0042802 "identical
            protein binding" evidence=IDA] InterPro:IPR008733 Pfam:PF05648
            EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005779 GO:GO:0042802
            GO:GO:0016559 EMBL:AC012463 TCDB:3.A.20.1.2 PANTHER:PTHR12652
            GO:GO:0044375 EMBL:AJ520106 EMBL:BT024474 EMBL:AK227048
            EMBL:AY084249 IPI:IPI00528100 PIR:B96518 RefSeq:NP_564514.1
            UniGene:At.21602 UniGene:At.71161 STRING:Q9FZF1 PaxDb:Q9FZF1
            PRIDE:Q9FZF1 EnsemblPlants:AT1G47750.1 GeneID:841186
            KEGG:ath:AT1G47750 TAIR:At1g47750 eggNOG:NOG316927
            HOGENOM:HOG000239990 InParanoid:Q9FZF1 OMA:DRDFLNH PhylomeDB:Q9FZF1
            ProtClustDB:CLSN2688530 Genevestigator:Q9FZF1 Uniprot:Q9FZF1
        Length = 248

 Score = 723 (259.6 bits), Expect = 1.8e-71, P = 1.8e-71
 Identities = 142/211 (67%), Positives = 172/211 (81%)

Query:    24 RDFLNHLEAYLAKRDGVDKLLKLSRYATKIILASSVLPETLPLTGRLKSFESSVGLSRKA 83
             RDFLNHLE YL+KRDGVDKLLK+SRYATKIILASS++PET  +  RLKSFESSVG+SRKA
Sbjct:    15 RDFLNHLETYLSKRDGVDKLLKISRYATKIILASSLIPETRSIIPRLKSFESSVGVSRKA 74

Query:    84 FRLGKFVQDVNALRNSHLDSLSREDLILSVIAYGGEGLYYFVEQFIWLAKSGLIDPKQSR 143
             FRLGKFVQD+NALR+S  DS    +L+L +IAYGGEGLYYFVEQFIWL KSGLID K S+
Sbjct:    75 FRLGKFVQDINALRSSRWDS--NHELVLLIIAYGGEGLYYFVEQFIWLTKSGLIDAKHSK 132

Query:   144 SLQKISAWAEFIGYIGSISLKFRDLKMILEDEACLASTIEIAISRGDGYKEEEQRXXXXX 203
              LQKISAWAE +GY+GS+S+K RDL+ + ++E+C+ASTIEI++SRG     E+++     
Sbjct:   133 WLQKISAWAELVGYVGSVSIKIRDLRKLNDEESCVASTIEISVSRGLACDGEDEKMKMIK 192

Query:   204 XXXXXXXXSIVQDLADGLMALADIRDGKGML 234
                     SI+QDLADGLM +ADIRDGKG+L
Sbjct:   193 EKKTLKVLSILQDLADGLMTIADIRDGKGVL 223


>TAIR|locus:2099590 [details] [associations]
            symbol:PEX11B "AT3G47430" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005778
            "peroxisomal membrane" evidence=ISS;IDA] [GO:0005779 "integral to
            peroxisomal membrane" evidence=IEA] [GO:0016559 "peroxisome
            fission" evidence=IEA;ISS;IMP] [GO:0007031 "peroxisome
            organization" evidence=IMP] [GO:0005515 "protein binding"
            evidence=IPI] [GO:0005777 "peroxisome" evidence=IDA] [GO:0042802
            "identical protein binding" evidence=IDA] [GO:0006098
            "pentose-phosphate shunt" evidence=RCA] InterPro:IPR008733
            Pfam:PF05648 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0005779
            GO:GO:0005778 GO:GO:0042802 GO:GO:0016559 EMBL:AL096860
            PANTHER:PTHR12652 GO:GO:0044375 HOGENOM:HOG000239990 EMBL:AJ520107
            EMBL:BT002033 EMBL:BT006271 IPI:IPI00531430 PIR:T12998
            RefSeq:NP_190327.1 UniGene:At.35807 STRING:Q9STY0 PaxDb:Q9STY0
            PRIDE:Q9STY0 EnsemblPlants:AT3G47430.1 GeneID:823897
            KEGG:ath:AT3G47430 TAIR:At3g47430 eggNOG:NOG270594
            InParanoid:Q9STY0 OMA:KQWEVAS PhylomeDB:Q9STY0
            ProtClustDB:CLSN2685170 Genevestigator:Q9STY0 Uniprot:Q9STY0
        Length = 227

 Score = 229 (85.7 bits), Expect = 4.0e-19, P = 4.0e-19
 Identities = 56/135 (41%), Positives = 80/135 (59%)

Query:    25 DFLNHLEAYLAKRDGVDKLLKLSRYATKIILASSVLPETLP-LTGRLKSFESSVGLSRKA 83
             D ++ L  +LAKRDG+DKL+K  +Y  K  LA   +  T P    R K +E + GLSRKA
Sbjct:     4 DTVDKLVVFLAKRDGIDKLVKTFQYVAK--LACWHVEATRPEAADRFKKWEVASGLSRKA 61

Query:    84 FRLGKFVQDVNALR-NSHLDSLSREDLILSVIAYGGEGLYYFVEQFIWLAKSGLIDPKQS 142
             FR G+ +   NALR N     + R    L+V+A  GE +Y+F + F+WL++ G ID K +
Sbjct:    62 FRTGRSLTGFNALRRNPGATPMIR---FLAVLANSGEMVYFFFDHFLWLSRIGSIDAKLA 118

Query:   143 RSLQKISAWAEFIGY 157
             + +  ISA+ E  GY
Sbjct:   119 KKMSFISAFGESFGY 133


>UNIPROTKB|Q00317 [details] [associations]
            symbol:PEX11B "Peroxisomal membrane protein PMP30B"
            species:5477 "Candida boidinii" [GO:0005779 "integral to
            peroxisomal membrane" evidence=ISS] [GO:0007031 "peroxisome
            organization" evidence=ISS] [GO:0007165 "signal transduction"
            evidence=ISS] InterPro:IPR008733 Pfam:PF05648 GO:GO:0007165
            GO:GO:0007031 GO:GO:0005779 GO:GO:0016559 PANTHER:PTHR12652
            EMBL:L28000 EMBL:U36243 PIR:S50281 Uniprot:Q00317
        Length = 256

 Score = 125 (49.1 bits), Expect = 4.3e-06, P = 4.3e-06
 Identities = 48/159 (30%), Positives = 78/159 (49%)

Query:    35 AKRDGVDKLLK-LSRYATKIILASSVLPETLPLTGRLKSFESSVGLSRKAFRLGKFVQDV 93
             A R+ + +LL+ L R+ T      +   ET+ L   +K  +SS+G+SRK  R   F++++
Sbjct:    23 ASREKLLRLLQYLCRFLTFYTFKRNFNIETIQL---IKKIQSSIGISRKPLR---FLKNL 76

Query:    94 NALRNSHLDSLSREDLILSVIAYG------GEGLYYFVEQFIWLAKSGLIDPKQSRSL-- 145
               L+N  L+ +   +L+ S +  G      G  LY+  +   WL   GL+  K S SL  
Sbjct:    77 PHLKN--LNKIYSNELLDSTLKIGDLIKNFGYALYFQFDTLQWLKLLGLLTSKNSGSLYF 134

Query:   146 --QKISAWAEFIGYIGSISLKFRDLKMILEDEACLASTI 182
                K++A    IG  GSI    R+LK+  +    L + I
Sbjct:   135 KIDKLAANFWLIGLTGSIITDLRNLKISYDSNKALLNEI 173


>UNIPROTKB|Q00316 [details] [associations]
            symbol:PEX11A "Peroxisomal membrane protein PMP30A"
            species:5477 "Candida boidinii" [GO:0005779 "integral to
            peroxisomal membrane" evidence=ISS] [GO:0007031 "peroxisome
            organization" evidence=ISS] [GO:0007165 "signal transduction"
            evidence=ISS] InterPro:IPR008733 Pfam:PF05648 GO:GO:0007165
            GO:GO:0007031 GO:GO:0005779 GO:GO:0016559 PANTHER:PTHR12652
            EMBL:L27999 PIR:S50280 Uniprot:Q00316
        Length = 256

 Score = 124 (48.7 bits), Expect = 5.7e-06, P = 5.7e-06
 Identities = 49/168 (29%), Positives = 82/168 (48%)

Query:    35 AKRDGVDKLLK-LSRYATKIILASSVLPETLPLTGRLKSFESSVGLSRKAFRLGKFVQDV 93
             A R+ + +LL+ L R+ T      ++  ET+ L   +K  +SS+ +SRK  R   F++++
Sbjct:    23 ASREKLLRLLQYLCRFLTYYTFRRNINIETIQL---IKKIQSSIAISRKPLR---FLKNL 76

Query:    94 NALRNSHLDSLSREDLILSVIAYG------GEGLYYFVEQFIWLAKSGLIDPKQSRSL-- 145
               L+N  L+ +   +L+ S I  G      G  LY+  +   WL   GL+  K S +L  
Sbjct:    77 PHLKN--LNKIYSNELLDSTIRIGDLIKNFGYALYFQFDTLQWLKLLGLLTSKNSGALYF 134

Query:   146 --QKISAWAEFIGYIGSISLKFRDLKMILEDEACLASTIEIAISRGDG 191
                K++A    IG  GSI    R+LK+  +    L + I  +  + DG
Sbjct:   135 KVDKLAANFWLIGLTGSIITDLRNLKISYDSNKALLNEIN-SQEKTDG 181


>TAIR|locus:2050694 [details] [associations]
            symbol:PEX11D "AT2G45740" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
            "mitochondrion" evidence=ISM;IDA] [GO:0005778 "peroxisomal
            membrane" evidence=ISS] [GO:0005779 "integral to peroxisomal
            membrane" evidence=IEA;IDA] [GO:0016559 "peroxisome fission"
            evidence=IEA;ISS;IMP] [GO:0009507 "chloroplast" evidence=IDA]
            [GO:0007031 "peroxisome organization" evidence=IMP] [GO:0005777
            "peroxisome" evidence=IDA] [GO:0005515 "protein binding"
            evidence=IPI] [GO:0042802 "identical protein binding" evidence=IDA]
            InterPro:IPR008733 Pfam:PF05648 GO:GO:0005739 GO:GO:0009507
            EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0005779 GO:GO:0042802
            GO:GO:0016559 EMBL:AC004665 PANTHER:PTHR12652 GO:GO:0044375
            eggNOG:NOG311020 HOGENOM:HOG000029130 ProtClustDB:CLSN2687613
            EMBL:AY054520 EMBL:AY084943 IPI:IPI00530782 PIR:T02473
            RefSeq:NP_001031544.1 RefSeq:NP_566055.1 RefSeq:NP_850441.1
            UniGene:At.12700 STRING:O80845 PaxDb:O80845 PRIDE:O80845
            EnsemblPlants:AT2G45740.1 EnsemblPlants:AT2G45740.2
            EnsemblPlants:AT2G45740.3 GeneID:819182 KEGG:ath:AT2G45740
            TAIR:At2g45740 InParanoid:O80845 OMA:YCWMASS PhylomeDB:O80845
            Genevestigator:O80845 Uniprot:O80845
        Length = 236

 Score = 115 (45.5 bits), Expect = 6.2e-05, P = 6.2e-05
 Identities = 42/167 (25%), Positives = 79/167 (47%)

Query:    33 YLAKRDGVDKLLKLSRYATKIILASSVLPETLPLTGRLKSFESSVGLSRKAFRLGKFVQD 92
             YL K +  DKL +  +Y +K +  S   P      G  ++ + S  L+RK FRL KFV D
Sbjct:    18 YLNKAEARDKLCRAIQYGSKFL--SGGQP------GTAQNVDKSTSLARKVFRLFKFVND 69

Query:    93 VNALRNSHLDSLSREDLILSVIAYGGEGLYYFVEQFIWLAKSGLIDPKQ-SRSLQKISAW 151
             ++ L +          ++L          + F++Q +WL +SG+   K+ +  L +IS +
Sbjct:    70 LHGLISPVPKGTPLPLVLLGKSKNALLSTFLFLDQIVWLGRSGIYKNKERAELLGRISLF 129

Query:   152 AEFIGYIGSISLKFRDLKMILEDEACLASTIEIAISRGDGYKEEEQR 198
               ++G   S+     ++  +    + +   IE  +  G+ Y++E+ R
Sbjct:   130 C-WMG--SSVCTTLVEVGEMGRLSSSMKK-IEKGLKNGNKYQDEDYR 172


>FB|FBgn0034058 [details] [associations]
            symbol:Pex11 "Peroxin 11" species:7227 "Drosophila
            melanogaster" [GO:0007031 "peroxisome organization"
            evidence=ISS;IMP] [GO:0016559 "peroxisome fission" evidence=IEA]
            [GO:0005779 "integral to peroxisomal membrane" evidence=IEA]
            InterPro:IPR008733 Pfam:PF05648 EMBL:AE013599 GO:GO:0007031
            GO:GO:0005779 GO:GO:0016559 PANTHER:PTHR12652
            GeneTree:ENSGT00390000014273 eggNOG:NOG319767 KO:K13352
            EMBL:AY071362 RefSeq:NP_611071.1 UniGene:Dm.5967 STRING:Q7JZE1
            EnsemblMetazoa:FBtr0087267 GeneID:36758 KEGG:dme:Dmel_CG8315
            UCSC:CG8315-RA FlyBase:FBgn0034058 InParanoid:Q7JZE1 OMA:CKIPARI
            OrthoDB:EOG4X9605 GenomeRNAi:36758 NextBio:800234 Uniprot:Q7JZE1
        Length = 241

 Score = 112 (44.5 bits), Expect = 0.00015, P = 0.00015
 Identities = 35/102 (34%), Positives = 54/102 (52%)

Query:    39 GVDKLLKLSRYATKIILASSVLPETLP-LTGRLKSFESSVGLSRKAFRLGKFVQDV--NA 95
             G DK+ +L +YA++ +  S     + P L    K+ E  +   RK  R GK V DV   A
Sbjct:    13 GRDKIARLIQYASRAMWDSLESANSNPALVDNFKTVEYILSTFRKLLRFGKCV-DVFYGA 71

Query:    96 LRNSHLDSLS-REDLILSVIAYGGEGLYYFVEQFIWLAKSGL 136
             L+  H   L+ R  L LS ++   + L+ F + F+WLA++GL
Sbjct:    72 LKTIHHPDLNIRVTLTLSKLS---QSLFLFADHFLWLARTGL 110


>TAIR|locus:2198150 [details] [associations]
            symbol:PEX11C "AT1G01820" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005778
            "peroxisomal membrane" evidence=ISS] [GO:0005779 "integral to
            peroxisomal membrane" evidence=IEA;IDA] [GO:0016559 "peroxisome
            fission" evidence=IEA;ISS;IMP] [GO:0007031 "peroxisome
            organization" evidence=IMP] [GO:0005515 "protein binding"
            evidence=IPI] [GO:0005777 "peroxisome" evidence=IDA] [GO:0042802
            "identical protein binding" evidence=IDA] [GO:0009506 "plasmodesma"
            evidence=IDA] [GO:0009627 "systemic acquired resistance"
            evidence=RCA] [GO:0031347 "regulation of defense response"
            evidence=RCA] InterPro:IPR008733 Pfam:PF05648 EMBL:CP002684
            GenomeReviews:CT485782_GR GO:GO:0009506 GO:GO:0005779 GO:GO:0042802
            GO:GO:0016559 EMBL:AC009273 PANTHER:PTHR12652 GO:GO:0044375
            EMBL:AB022861 EMBL:AJ520104 EMBL:AF332441 EMBL:AY064139
            EMBL:AY097406 EMBL:AY086844 IPI:IPI00532575 PIR:A86150
            RefSeq:NP_563636.1 UniGene:At.24237 STRING:Q9LQ73 PaxDb:Q9LQ73
            PRIDE:Q9LQ73 EnsemblPlants:AT1G01820.1 GeneID:839257
            KEGG:ath:AT1G01820 TAIR:At1g01820 eggNOG:NOG311020
            HOGENOM:HOG000029130 InParanoid:Q9LQ73 OMA:KNEQYRM PhylomeDB:Q9LQ73
            ProtClustDB:CLSN2687613 Genevestigator:Q9LQ73 Uniprot:Q9LQ73
        Length = 235

 Score = 108 (43.1 bits), Expect = 0.00044, P = 0.00044
 Identities = 40/167 (23%), Positives = 79/167 (47%)

Query:    33 YLAKRDGVDKLLKLSRYATKIILASSVLPETLPLTGRLKSFESSVGLSRKAFRLGKFVQD 92
             YL K +  DK+ +  +Y +K +  S   P      G  ++ + +  L+RK FRL KFV D
Sbjct:    17 YLNKAEARDKICRAIQYGSKFL--SDGQP------GTAQNVDKNTSLARKVFRLFKFVND 68

Query:    93 VNALRNSHLDSLSREDLILSVIAYGGEGLYYFVEQFIWLAKSGLI-DPKQSRSLQKISAW 151
             ++AL +          ++L          + F++Q +WL ++G+  D +++  L +IS +
Sbjct:    69 LHALISPVPKGTPLPLVLLGKSKNALLSTFLFLDQIVWLGRTGIYKDKERAEILGRISLF 128

Query:   152 AEFIGYIGSISLKFRDLKMILEDEACLASTIEIAISRGDGYKEEEQR 198
               ++G   S+     ++  +    A +   +E  I   D ++ E+ R
Sbjct:   129 C-WMG--SSVCTSLVEVGELGRLSASIKK-LEKEIGNKDKHQNEQYR 171


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.320   0.137   0.380    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      235       210   0.00080  112 3  11 22  0.49    32
                                                     31  0.48    35


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  7
  No. of states in DFA:  589 (63 KB)
  Total size of DFA:  145 KB (2089 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  18.18u 0.11s 18.29t   Elapsed:  00:00:01
  Total cpu time:  18.18u 0.11s 18.29t   Elapsed:  00:00:01
  Start:  Sat May 11 12:09:23 2013   End:  Sat May 11 12:09:24 2013

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