BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 039694
(235 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FZF1|PX11A_ARATH Peroxisomal membrane protein 11A OS=Arabidopsis thaliana GN=PEX11A
PE=1 SV=1
Length = 248
Score = 303 bits (777), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 153/216 (70%), Positives = 186/216 (86%), Gaps = 2/216 (0%)
Query: 19 SKPKDRDFLNHLEAYLAKRDGVDKLLKLSRYATKIILASSVLPETLPLTGRLKSFESSVG 78
+KPKDRDFLNHLE YL+KRDGVDKLLK+SRYATKIILASS++PET + RLKSFESSVG
Sbjct: 10 TKPKDRDFLNHLETYLSKRDGVDKLLKISRYATKIILASSLIPETRSIIPRLKSFESSVG 69
Query: 79 LSRKAFRLGKFVQDVNALRNSHLDSLSREDLILSVIAYGGEGLYYFVEQFIWLAKSGLID 138
+SRKAFRLGKFVQD+NALR+S DS +L+L +IAYGGEGLYYFVEQFIWL KSGLID
Sbjct: 70 VSRKAFRLGKFVQDINALRSSRWDS--NHELVLLIIAYGGEGLYYFVEQFIWLTKSGLID 127
Query: 139 PKQSRSLQKISAWAEFIGYIGSISLKFRDLKMILEDEACLASTIEIAISRGDGYKEEEQR 198
K S+ LQKISAWAE +GY+GS+S+K RDL+ + ++E+C+ASTIEI++SRG E+++
Sbjct: 128 AKHSKWLQKISAWAELVGYVGSVSIKIRDLRKLNDEESCVASTIEISVSRGLACDGEDEK 187
Query: 199 MKKLKAKKLMKKLSIVQDLADGLMALADIRDGKGML 234
MK +K KK +K LSI+QDLADGLM +ADIRDGKG+L
Sbjct: 188 MKMIKEKKTLKVLSILQDLADGLMTIADIRDGKGVL 223
>sp|Q10MN2|PX113_ORYSJ Peroxisomal membrane protein 11-3 OS=Oryza sativa subsp. japonica
GN=PEX11-3 PE=2 SV=1
Length = 242
Score = 206 bits (525), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 116/224 (51%), Positives = 162/224 (72%), Gaps = 21/224 (9%)
Query: 16 STDSK-----PKDRDFLNHLEAYLAKRDGVDKLLKLSRYATKIILASSVLPETLPLTGRL 70
S+DS+ P RDFL H+EAYL++RDGVDKLLK+SRYA ++ LA+ LP + RL
Sbjct: 10 SSDSRKPAAHPPPRDFLVHVEAYLSRRDGVDKLLKISRYAARLALAAGPLPPA--ASARL 67
Query: 71 KSFESSVGLSRKAFRLGKFVQDVNALRNSHLDSLSREDLILSVIAYGGEGLYYFVEQFIW 130
KSFESSVGLSRKAFRLGKFVQ+VNALR +H ++++AYGGEG+YYF+EQF+W
Sbjct: 68 KSFESSVGLSRKAFRLGKFVQNVNALR-AH----PHPPPAVALLAYGGEGVYYFLEQFVW 122
Query: 131 LAKSGLIDPKQSRSLQKISAWAEFIGYIGSISLKFRDLKMILEDEACLASTIEIAISRGD 190
LAK+GL+ LQ++SAWAE +GY+GSI++K LE+ L S++++ + +
Sbjct: 123 LAKAGLLPAHLLPRLQRLSAWAELLGYVGSITIK-------LEEIGKLESSVKMRLK--E 173
Query: 191 GYKEEEQRMKKLKAKKLMKKLSIVQDLADGLMALADIRDGKGML 234
G +EE ++ L+ K L+K++S+VQD+AD +MAL D+ DGKG+L
Sbjct: 174 GCREESDVVRTLRVKLLLKRMSVVQDVADAVMALGDVTDGKGLL 217
>sp|A2XFQ8|PX113_ORYSI Peroxisomal membrane protein 11-3 OS=Oryza sativa subsp. indica
GN=PEX11-3 PE=2 SV=1
Length = 242
Score = 206 bits (525), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 116/224 (51%), Positives = 162/224 (72%), Gaps = 21/224 (9%)
Query: 16 STDSK-----PKDRDFLNHLEAYLAKRDGVDKLLKLSRYATKIILASSVLPETLPLTGRL 70
S+DS+ P RDFL H+EAYL++RDGVDKLLK+SRYA ++ LA+ LP + RL
Sbjct: 10 SSDSRKPAAHPPPRDFLVHVEAYLSRRDGVDKLLKISRYAARLALAAGPLPPA--ASARL 67
Query: 71 KSFESSVGLSRKAFRLGKFVQDVNALRNSHLDSLSREDLILSVIAYGGEGLYYFVEQFIW 130
KSFESSVGLSRKAFRLGKFVQ+VNALR +H ++++AYGGEG+YYF+EQF+W
Sbjct: 68 KSFESSVGLSRKAFRLGKFVQNVNALR-AH----PHPPPAVALLAYGGEGVYYFLEQFVW 122
Query: 131 LAKSGLIDPKQSRSLQKISAWAEFIGYIGSISLKFRDLKMILEDEACLASTIEIAISRGD 190
LAK+GL+ LQ++SAWAE +GY+GSI++K LE+ L S++++ + +
Sbjct: 123 LAKAGLLPAHLLPRLQRLSAWAELLGYVGSITIK-------LEEIGKLESSVKMRLK--E 173
Query: 191 GYKEEEQRMKKLKAKKLMKKLSIVQDLADGLMALADIRDGKGML 234
G +EE ++ L+ K L+K++S+VQD+AD +MAL D+ DGKG+L
Sbjct: 174 GCREESDVVRTLRVKLLLKRMSVVQDVADAVMALGDVTDGKGLL 217
>sp|Q10MN3|PX112_ORYSJ Peroxisomal membrane protein 11-2 OS=Oryza sativa subsp. japonica
GN=PEX11-2 PE=2 SV=1
Length = 254
Score = 171 bits (434), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 101/221 (45%), Positives = 142/221 (64%), Gaps = 14/221 (6%)
Query: 19 SKPK--DRDFLNHLEAYLAKRDGVDKLLKLSRYATKIILASSVLPETLP--LTGRLKSFE 74
S+P+ RD L H+EAYL++RDGVD LLK+S YA ++ LA + LP T RL+SFE
Sbjct: 18 SRPRLPCRDILVHIEAYLSRRDGVDNLLKVSLYAARLALALAAGQPPLPHAATARLRSFE 77
Query: 75 SSVGLSRKAFRLGKFVQDVNALRNSHLDSLSREDLILSVIAYGGEGLYYFVEQFIWLAKS 134
SSVGLSRKAFRLGKFVQ +NALR + +L ++AYGG+G+Y F+EQF WLAK+
Sbjct: 78 SSVGLSRKAFRLGKFVQSINALRAAAYHPHPHVHPLLVLLAYGGQGVYNFLEQFAWLAKA 137
Query: 135 GLIDPK-QSRSLQKISAWAEFIGYIGSISLKFRDLKMILEDEACLASTIEIAISRGDGYK 193
GL+ + R L +I WA+ + ++GSI++K LE+ A L +E + G G
Sbjct: 138 GLLPARLLPRRLHRIGVWAQLLAHVGSIAIK-------LEEVAELECGVEARLEEGCG-- 188
Query: 194 EEEQRMKKLKAKKLMKKLSIVQDLADGLMALADIRDGKGML 234
EE + ++ L K L+K +S+VQD+ D M + D+ KG+L
Sbjct: 189 EESEVVRTLSRKLLLKLMSLVQDMVDSAMTVGDVTGRKGLL 229
>sp|Q7XU74|PX114_ORYSJ Peroxisomal membrane protein 11-4 OS=Oryza sativa subsp. japonica
GN=PEX11-4 PE=2 SV=2
Length = 222
Score = 116 bits (291), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 71/204 (34%), Positives = 121/204 (59%), Gaps = 17/204 (8%)
Query: 25 DFLNHLEAYLAKRDGVDKLLKLSRYATKIILASSVLPETLP-LTGRLKSFESSVGLSRKA 83
D L+ L +LAKRDG+DKL+K +Y +K LA + P L GR K++E+S GLSRKA
Sbjct: 5 DTLDKLVVFLAKRDGIDKLVKTFQYVSK--LAHWAAESSSPGLAGRAKNWETSAGLSRKA 62
Query: 84 FRLGKFVQDVNALRNSHLDSLSREDLILSVIAYGGEGLYYFVEQFIWLAKSGLIDPKQSR 143
FR G+F+ +N LR + E L+V+A GE +Y+F + F WL++ G++D +R
Sbjct: 63 FRTGRFLTGLNGLRRA-----PGEFGALAVLANAGEMVYFFFDHFTWLSRVGVLDAWLAR 117
Query: 144 SLQKISAWAEFIGYIGSISLKFRDLKMILEDEACLASTIEIAISRGDGYKEEEQRMKKLK 203
+ ISA+ E +GY+ I++ ++ L E L +G K++++ +KK++
Sbjct: 118 RMSFISAFGESVGYVFFIAMDLIMIRRGLRQERKLLR---------EGGKDKDKEVKKIR 168
Query: 204 AKKLMKKLSIVQDLADGLMALADI 227
++M+ ++ ++AD ++ +ADI
Sbjct: 169 MDRVMRLMATAANVADLVIGIADI 192
>sp|Q01IH3|PX114_ORYSI Peroxisomal membrane protein 11-4 OS=Oryza sativa subsp. indica
GN=PEX11-4 PE=2 SV=1
Length = 222
Score = 116 bits (291), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 71/204 (34%), Positives = 121/204 (59%), Gaps = 17/204 (8%)
Query: 25 DFLNHLEAYLAKRDGVDKLLKLSRYATKIILASSVLPETLP-LTGRLKSFESSVGLSRKA 83
D L+ L +LAKRDG+DKL+K +Y +K LA + P L GR K++E+S GLSRKA
Sbjct: 5 DTLDKLVVFLAKRDGIDKLVKTFQYVSK--LAHWAAESSSPGLAGRAKNWETSAGLSRKA 62
Query: 84 FRLGKFVQDVNALRNSHLDSLSREDLILSVIAYGGEGLYYFVEQFIWLAKSGLIDPKQSR 143
FR G+F+ +N LR + E L+V+A GE +Y+F + F WL++ G++D +R
Sbjct: 63 FRTGRFLTGLNGLRRA-----PGEFGALAVLANAGEMVYFFFDHFTWLSRVGVLDAWLAR 117
Query: 144 SLQKISAWAEFIGYIGSISLKFRDLKMILEDEACLASTIEIAISRGDGYKEEEQRMKKLK 203
+ ISA+ E +GY+ I++ ++ L E L +G K++++ +KK++
Sbjct: 118 RMSFISAFGESVGYVFFIAMDLIMIRRGLRQERKLLR---------EGGKDKDKEVKKIR 168
Query: 204 AKKLMKKLSIVQDLADGLMALADI 227
++M+ ++ ++AD ++ +ADI
Sbjct: 169 MDRVMRLMATAANVADLVIGIADI 192
>sp|Q9STY0|PX11B_ARATH Peroxisomal membrane protein 11B OS=Arabidopsis thaliana GN=PEX11B
PE=1 SV=1
Length = 227
Score = 96.7 bits (239), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/207 (35%), Positives = 113/207 (54%), Gaps = 15/207 (7%)
Query: 25 DFLNHLEAYLAKRDGVDKLLKLSRYATKIILASSVLPETLPLTG-RLKSFESSVGLSRKA 83
D ++ L +LAKRDG+DKL+K +Y K LA + T P R K +E + GLSRKA
Sbjct: 4 DTVDKLVVFLAKRDGIDKLVKTFQYVAK--LACWHVEATRPEAADRFKKWEVASGLSRKA 61
Query: 84 FRLGKFVQDVNALR-NSHLDSLSREDLILSVIAYGGEGLYYFVEQFIWLAKSGLIDPKQS 142
FR G+ + NALR N + R L+V+A GE +Y+F + F+WL++ G ID K +
Sbjct: 62 FRTGRSLTGFNALRRNPGATPMIR---FLAVLANSGEMVYFFFDHFLWLSRIGSIDAKLA 118
Query: 143 RSLQKISAWAEFIGYIGSISLKFRDLKMILEDEACLASTIEIAISRGDGYKEE-EQRMKK 201
+ + ISA+ E GY I + +K L+ L + D KEE ++ +
Sbjct: 119 KKMSFISAFGESFGYTFFIIIDCIFIKQRLKSLKKLQHST-------DEPKEEIGAKISE 171
Query: 202 LKAKKLMKKLSIVQDLADGLMALADIR 228
++ +M+ + I ++AD L+ALA+I
Sbjct: 172 IRGDIVMRLMGISANVADLLIALAEIH 198
>sp|O80845|PX11D_ARATH Peroxisomal membrane protein 11D OS=Arabidopsis thaliana GN=PEX11D
PE=1 SV=2
Length = 236
Score = 47.0 bits (110), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 92/202 (45%), Gaps = 20/202 (9%)
Query: 33 YLAKRDGVDKLLKLSRYATKIILASSVLPETLPLTGRLKSFESSVGLSRKAFRLGKFVQD 92
YL K + DKL + +Y +K + G ++ + S L+RK FRL KFV D
Sbjct: 18 YLNKAEARDKLCRAIQYGSKFLSGGQ--------PGTAQNVDKSTSLARKVFRLFKFVND 69
Query: 93 VNALRNSHLDSLSREDLILSVIAYGGEGLYYFVEQFIWLAKSGLIDPKQ-SRSLQKISAW 151
++ L + ++L + F++Q +WL +SG+ K+ + L +IS +
Sbjct: 70 LHGLISPVPKGTPLPLVLLGKSKNALLSTFLFLDQIVWLGRSGIYKNKERAELLGRISLF 129
Query: 152 AEFIGYIGSISLKFRDLKMILEDEACLASTIEIAISRGDGYKEEEQRMKKLKAKKLMKKL 211
+ + ++ ++ + IE + G+ Y++E+ R K K+ + + L
Sbjct: 130 CWMGSSVCTTLVEVGEMGRLSSS----MKKIEKGLKNGNKYQDEDYRAKLKKSNE--RSL 183
Query: 212 SIVQD-----LADGLMALADIR 228
++++ +A GL+ LA +
Sbjct: 184 ALIKSAMDIVVAAGLLQLAPTK 205
>sp|Q5VRJ8|PX115_ORYSJ Peroxisomal membrane protein 11-5 OS=Oryza sativa subsp. japonica
GN=PEX11-5 PE=2 SV=1
Length = 233
Score = 44.7 bits (104), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 63/129 (48%), Gaps = 13/129 (10%)
Query: 33 YLAKRDGVDKLLKLSRYATKIILASSVLPETLPLTGRLKSFESSVGLSRKAFRLGKFVQD 92
YL K + DK+ + +Y +K + S+ P G ++ + S L+RK FRL KFV D
Sbjct: 17 YLNKAEARDKICRAIQYGSKFV--SNGQP------GPAQNVDKSTSLARKVFRLFKFVND 68
Query: 93 VNALRNSHLDSLSREDLILSVIAYGGEGLYYFVEQFIWLAKSGLIDPKQ-SRSLQKISAW 151
++AL + ++L + F++Q +W ++G+ K+ + L KI+
Sbjct: 69 LHALISPPAKGTPLPLILLGKSKNALLSTFLFLDQIVWAGRTGIYKNKERAEFLSKIA-- 126
Query: 152 AEFIGYIGS 160
F ++GS
Sbjct: 127 --FYCFLGS 133
>sp|Q10SM7|PX111_ORYSJ Peroxisomal membrane protein 11-1 OS=Oryza sativa subsp. japonica
GN=PEX11-1 PE=2 SV=1
Length = 237
Score = 43.1 bits (100), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 53/109 (48%), Gaps = 8/109 (7%)
Query: 33 YLAKRDGVDKLLKLSRYATKIILASSVLPETLPLTGRLKSFESSVGLSRKAFRLGKFVQD 92
YL K + DK+ + +Y +K I S+ P G + + S L+RK FRL K+V D
Sbjct: 17 YLNKAEARDKICRAIQYGSKFI--SNGQP------GTAQDVDRSTTLARKVFRLLKWVND 68
Query: 93 VNALRNSHLDSLSREDLILSVIAYGGEGLYYFVEQFIWLAKSGLIDPKQ 141
++ L + ++L + F++QF+WL ++G+ K+
Sbjct: 69 LHGLISPPAKGTPLTLVLLGKSKNALLSTFLFLDQFVWLGRTGIYKNKE 117
>sp|Q9LQ73|PX11C_ARATH Peroxisomal membrane protein 11C OS=Arabidopsis thaliana GN=PEX11C
PE=1 SV=1
Length = 235
Score = 42.7 bits (99), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 63/130 (48%), Gaps = 9/130 (6%)
Query: 24 RDFLNHLEAYLAKRDGVDKLLKLSRYATKIILASSVLPETLPLTGRLKSFESSVGLSRKA 83
R L + YL K + DK+ + +Y +K L + P G ++ + + L+RK
Sbjct: 8 RAELGLVVVYLNKAEARDKICRAIQYGSKF------LSDGQP--GTAQNVDKNTSLARKV 59
Query: 84 FRLGKFVQDVNALRNSHLDSLSREDLILSVIAYGGEGLYYFVEQFIWLAKSGLI-DPKQS 142
FRL KFV D++AL + ++L + F++Q +WL ++G+ D +++
Sbjct: 60 FRLFKFVNDLHALISPVPKGTPLPLVLLGKSKNALLSTFLFLDQIVWLGRTGIYKDKERA 119
Query: 143 RSLQKISAWA 152
L +IS +
Sbjct: 120 EILGRISLFC 129
>sp|Q54H86|PEX11_DICDI Peroxisomal membrane protein 11 homolog OS=Dictyostelium discoideum
GN=pex11 PE=3 SV=1
Length = 254
Score = 42.0 bits (97), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 75/167 (44%), Gaps = 7/167 (4%)
Query: 19 SKPKDRDFLNHLEAYLAKRDGVDKLLKLSRYATKIILASSVLPETLPLTGRLKSFESSVG 78
SKP FL L LA+ G DK+ K+ +Y K +L L + +K E++ G
Sbjct: 6 SKPNYNQFLESLIKLLAQTSGKDKIAKILQYGAK-LLGYIFLKRSKHWVDVMKKLETTSG 64
Query: 79 LSRKAFRLGKFV---QDVNALRNSHLDSLSREDLILSVIAYGGEGLYYFVEQFIWLAKSG 135
+RK +RLG + Q + AL + + + IL++I G Y+ + I G
Sbjct: 65 SARKVWRLGNTLAEQQKILALFKVK-NPFAFLN-ILALIRQSGMYFYWVFDHLILGTNIG 122
Query: 136 LIDPKQSRSLQKISAWAEFIGYIGSISLKFRDLKMILEDEACLASTI 182
L + L S+ + F G + SI + L ++L+ E L TI
Sbjct: 123 LCKFDTVK-LGWYSSVSWFFGLLCSIIIDLNTLAIMLKKEKSLRLTI 168
>sp|Q84JW1|PX11E_ARATH Peroxisomal membrane protein 11E OS=Arabidopsis thaliana GN=PEX11E
PE=1 SV=1
Length = 231
Score = 41.6 bits (96), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 50/113 (44%), Gaps = 8/113 (7%)
Query: 33 YLAKRDGVDKLLKLSRYATKIILASSVLPETLPLTGRLKSFESSVGLSRKAFRLGKFVQD 92
YL K + DK+ + +Y +K + G ++ + + L+RK FRL KFV D
Sbjct: 17 YLNKAEARDKICRAIQYGSKFLSGGQ--------PGTAQTVDKNTSLARKVFRLFKFVND 68
Query: 93 VNALRNSHLDSLSREDLILSVIAYGGEGLYYFVEQFIWLAKSGLIDPKQSRSL 145
+ L + ++L + F++Q +WL +SG+ K+ L
Sbjct: 69 FHGLISPVPKGTPLPLVLLGKSKNALLSTFLFLDQIVWLGRSGIYKNKERTEL 121
>sp|Q00316|PX11A_CANBO Peroxisomal membrane protein PMP30A OS=Candida boidinii GN=PEX11A
PE=1 SV=1
Length = 256
Score = 37.4 bits (85), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 103/220 (46%), Gaps = 33/220 (15%)
Query: 35 AKRDGVDKLLK-LSRYATKIILASSVLPETLPLTGRLKSFESSVGLSRKAFRLGKFVQDV 93
A R+ + +LL+ L R+ T ++ ET+ L +K +SS+ +SRK R F++++
Sbjct: 23 ASREKLLRLLQYLCRFLTYYTFRRNINIETIQL---IKKIQSSIAISRKPLR---FLKNL 76
Query: 94 NALRNSHLDSLSREDLILSVIAYG------GEGLYYFVEQFIWLAKSGLIDPKQSRSL-- 145
L+N L+ + +L+ S I G G LY+ + WL GL+ K S +L
Sbjct: 77 PHLKN--LNKIYSNELLDSTIRIGDLIKNFGYALYFQFDTLQWLKLLGLLTSKNSGALYF 134
Query: 146 --QKISAWAEFIGYIGSISLKFRDLKMILEDEACLASTIEIAISRGDGYKEEEQRMK--- 200
K++A IG GSI R+LK+ + L + I + + DG ++++
Sbjct: 135 KVDKLAANFWLIGLTGSIITDLRNLKISYDSNKALLNEIN-SQEKTDGSITSDEKLIVQN 193
Query: 201 -----KLKAKKLMKKLSIVQDLADGLMA-----LADIRDG 230
K K + K + +++ D L+A L D+ DG
Sbjct: 194 NELILKNNEKINLNKRDLFKNVLDSLIALKGSQLIDLNDG 233
>sp|O75192|PX11A_HUMAN Peroxisomal membrane protein 11A OS=Homo sapiens GN=PEX11A PE=1
SV=1
Length = 247
Score = 37.0 bits (84), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 52/108 (48%), Gaps = 8/108 (7%)
Query: 33 YLAKRDGVDKLLKLSRYATKIILASSVLPET--LPLTGRLKSFESSVGLSRKAFRLGKFV 90
+ + G D+L + ++Y T ++L + P+ + +LK ESSV RK FRLG V
Sbjct: 7 FTNQTQGRDRLFRATQY-TCMLLRYLLEPKAGKEKVVMKLKKLESSVSTGRKWFRLGNVV 65
Query: 91 QDVNALRNS-H-LDSLSREDLILSVIAYGGEGLYYFVEQFIWLAKSGL 136
+ A S H D + R L L+ + +Y+ + +W+ GL
Sbjct: 66 HAIQATEQSIHATDLVPRLCLTLANL---NRVIYFICDTILWVRSVGL 110
>sp|Q00317|PX11B_CANBO Peroxisomal membrane protein PMP30B OS=Candida boidinii GN=PEX11B
PE=1 SV=1
Length = 256
Score = 36.6 bits (83), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 78/159 (49%), Gaps = 19/159 (11%)
Query: 35 AKRDGVDKLLK-LSRYATKIILASSVLPETLPLTGRLKSFESSVGLSRKAFRLGKFVQDV 93
A R+ + +LL+ L R+ T + ET+ L +K +SS+G+SRK R F++++
Sbjct: 23 ASREKLLRLLQYLCRFLTFYTFKRNFNIETIQL---IKKIQSSIGISRKPLR---FLKNL 76
Query: 94 NALRNSHLDSLSREDLILSVIAYG------GEGLYYFVEQFIWLAKSGLIDPKQSRSL-- 145
L+N L+ + +L+ S + G G LY+ + WL GL+ K S SL
Sbjct: 77 PHLKN--LNKIYSNELLDSTLKIGDLIKNFGYALYFQFDTLQWLKLLGLLTSKNSGSLYF 134
Query: 146 --QKISAWAEFIGYIGSISLKFRDLKMILEDEACLASTI 182
K++A IG GSI R+LK+ + L + I
Sbjct: 135 KIDKLAANFWLIGLTGSIITDLRNLKISYDSNKALLNEI 173
>sp|O70597|PX11A_RAT Peroxisomal membrane protein 11A OS=Rattus norvegicus GN=Pex11a
PE=1 SV=1
Length = 246
Score = 35.4 bits (80), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 48/104 (46%), Gaps = 10/104 (9%)
Query: 38 DGVDKLLKLSRYAT---KIILASSVLPETLPLTGRLKSFESSVGLSRKAFRLGKFVQDVN 94
G D+L + +++A + +L S E + +LK+ E+SV RK FRLG + +
Sbjct: 12 QGRDRLFRATQHACMLLRYLLESKAGKEAV--VTKLKNLETSVSTGRKWFRLGNVLHAIQ 69
Query: 95 ALRNS--HLDSLSREDLILSVIAYGGEGLYYFVEQFIWLAKSGL 136
A S D + R L L+ + +YY + +W GL
Sbjct: 70 ATEQSIQATDLVPRLCLTLANL---NRVVYYICDTVLWAKSVGL 110
>sp|Q9Z211|PX11A_MOUSE Peroxisomal membrane protein 11A OS=Mus musculus GN=Pex11a PE=2
SV=1
Length = 246
Score = 35.4 bits (80), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 60/138 (43%), Gaps = 9/138 (6%)
Query: 38 DGVDKLLKLSRYAT---KIILASSVLPETLPLTGRLKSFESSVGLSRKAFRLGKFVQDVN 94
G D+L + +++A + +L S E + L +LK E+SV RK FRLG +
Sbjct: 12 QGRDRLFRATQHACMLLRYLLESKADKEAVVL--KLKRLETSVSTGRKWFRLGNVFHAIQ 69
Query: 95 ALRNSHLDSLSREDLILSVIAYGGEGLYYFVEQFIWLAKSGLIDPKQSRSLQKISAWAEF 154
A S + L L+ +A +YY + +W GL Q+ +A +
Sbjct: 70 ATEQSIQAADLAPRLCLT-LANLNRVVYYICDTVLWAKSVGLTSGVNREKWQRWAARHYY 128
Query: 155 IGYIGSISLKFRDLKMIL 172
Y +SL RDL IL
Sbjct: 129 --YFLLLSL-VRDLYEIL 143
>sp|Q9LZB8|AB29B_ARATH ABC transporter B family member 29, chloroplastic OS=Arabidopsis
thaliana GN=ABCB29 PE=1 SV=1
Length = 634
Score = 35.0 bits (79), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Query: 66 LTGRLKSFESSVGLSRKAFRLGKFVQDVNALRNSHLDSLSREDLILSVIAYGGEGLYYFV 125
L G L S S V LS+ RLG F ++NA + L L E L+L+ + YY
Sbjct: 77 LLGWLCSCVSVVSLSQIVPRLGSFTSNLNA-NAASLTKLKGECLVLAGLVLAKVVAYYLQ 135
Query: 126 EQFIWLA 132
+ F+W A
Sbjct: 136 QAFLWEA 142
>sp|Q9LVT3|DRL38_ARATH Probable disease resistance protein At5g47260 OS=Arabidopsis
thaliana GN=At5g47260 PE=3 SV=2
Length = 948
Score = 35.0 bits (79), Expect = 0.50, Method: Composition-based stats.
Identities = 28/85 (32%), Positives = 42/85 (49%), Gaps = 9/85 (10%)
Query: 79 LSRKAFRLGKFVQDVNALRNSHLDSLSREDLILSVIAYGGEGLYYFVEQFIWLAKSGLID 138
L R L K +QD+NA+RN L LS+E+ I G +GL E W++ I+
Sbjct: 26 LERNLEALHKVMQDLNAMRNDLLKRLSKEEEI------GLQGLQEVKE---WISMVEEIE 76
Query: 139 PKQSRSLQKISAWAEFIGYIGSISL 163
PK +R L + + + + G SL
Sbjct: 77 PKANRLLDESVSEIQRLSRYGYCSL 101
>sp|Q0VCP2|PX11A_BOVIN Peroxisomal membrane protein 11A OS=Bos taurus GN=PEX11A PE=2 SV=1
Length = 247
Score = 34.3 bits (77), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 53/108 (49%), Gaps = 8/108 (7%)
Query: 33 YLAKRDGVDKLLKLSRYATKIILASSVLP--ETLPLTGRLKSFESSVGLSRKAFRLGKFV 90
+ + G D+L + ++Y T ++L + P + + +LK ESSV RK FRLG V
Sbjct: 7 FTNQTQGRDRLFRATQY-TCMLLRYLLEPKADNEKVVMKLKKLESSVSTGRKWFRLGNVV 65
Query: 91 QDVNALRNS--HLDSLSREDLILSVIAYGGEGLYYFVEQFIWLAKSGL 136
+ A + S D + R L L+ + +Y+ + +++ +GL
Sbjct: 66 HALQATQQSVRATDLVPRICLTLASL---NRVIYFICDTVLFVRSTGL 110
>sp|Q9FLB3|FK153_ARATH Peptidyl-prolyl cis-trans isomerase FKBP15-3 OS=Arabidopsis
thaliana GN=FKBP15-3 PE=2 SV=1
Length = 143
Score = 33.1 bits (74), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Query: 66 LTGRLKSFESSVGLSRKAFRL--GKFVQDVNALRNSHLDSLSREDLILSVIAYGGEG 120
L G K F+S+VG SR FRL GK ++ ++ N L R+ I + YG EG
Sbjct: 67 LQGNGKIFDSTVGKSRYKFRLDAGKVIKGLDVGLNGMLVGGKRKLTIPPEMGYGAEG 123
>sp|Q5RFI0|PX11B_PONAB Peroxisomal membrane protein 11B OS=Pongo abelii GN=PEX11B PE=2
SV=1
Length = 259
Score = 33.1 bits (74), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 48/107 (44%), Gaps = 10/107 (9%)
Query: 35 AKRDGVDKLLKLSRYAT----KIILASSVLPETLPLTGRLKSFESSVGLSRKAFRLGKFV 90
A+ ++L + ++YA ++ PE L +++ ES + L RK RLG
Sbjct: 9 AQSQARERLCRAAQYACSLLGHVLQRHGASPE---LQKQIRQLESHLSLGRKLLRLGNSA 65
Query: 91 QDV-NALRNSHLDSLSREDLILSVIAYGGEGLYYFVEQFIWLAKSGL 136
+ +A R HL + I +++ LY+ + +W KSGL
Sbjct: 66 DALESAKRAVHLSDVVLRFCI--TVSHLNRALYFACDNVLWAGKSGL 110
>sp|Q8BZZ3|WWP1_MOUSE NEDD4-like E3 ubiquitin-protein ligase WWP1 OS=Mus musculus GN=Wwp1
PE=1 SV=2
Length = 918
Score = 33.1 bits (74), Expect = 1.7, Method: Composition-based stats.
Identities = 27/108 (25%), Positives = 50/108 (46%), Gaps = 5/108 (4%)
Query: 114 IAYGGEGLYYFVEQFIWLAKSGLIDPKQSRSLQKISAWAEFIGYIGSISLKFRDLKMILE 173
I Y EG+ YFV+ + DP+ +S ++ I Y S K + + +
Sbjct: 500 IRYTREGVRYFVDHNT--RTTTFKDPRNGKS--SVTKGGPQIAYERSFRWKLAHFRYLCQ 555
Query: 174 DEACLASTIEIAISRGDGYKEEEQRMKKLKAKKLMKKLSIVQDLADGL 221
A L S ++I +SR +++ Q++ LK L ++L ++ +GL
Sbjct: 556 SNA-LPSHVKINVSRQTLFEDSFQQIMALKPYDLRRRLYVIFRGEEGL 602
>sp|Q9M1B9|SCRK4_ARATH Probable fructokinase-4 OS=Arabidopsis thaliana GN=At3g59480 PE=2
SV=1
Length = 326
Score = 32.7 bits (73), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 41/87 (47%), Gaps = 8/87 (9%)
Query: 103 SLSREDLILSVIAYGGEGLYYFVEQFIWLAKSGLIDPKQSRSLQKISAWAEFIGYIGSIS 162
SL +L L ++ G +G Y+ + F G +DP ++ A F+G ++
Sbjct: 222 SLWHSNLKLLLVTLGEKGCRYYTKSF-----RGSVDPFHVDAVDTTGAGDSFVG---ALL 273
Query: 163 LKFRDLKMILEDEACLASTIEIAISRG 189
K D + +LEDEA L + +A + G
Sbjct: 274 CKIVDDRAVLEDEARLREVLRLANACG 300
>sp|O96011|PX11B_HUMAN Peroxisomal membrane protein 11B OS=Homo sapiens GN=PEX11B PE=1
SV=1
Length = 259
Score = 32.7 bits (73), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 48/104 (46%), Gaps = 4/104 (3%)
Query: 35 AKRDGVDKLLKLSRYATKIILASSVLPETLP-LTGRLKSFESSVGLSRKAFRLGKFVQDV 93
A+ ++L + ++YA ++ + P L +++ ES + L RK RLG +
Sbjct: 9 AQSQARERLCRAAQYACSLLGHALQRHGASPELQKQIRQLESHLSLGRKLLRLGNSADAL 68
Query: 94 -NALRNSHLDSLSREDLILSVIAYGGEGLYYFVEQFIWLAKSGL 136
+A R HL + I +++ LY+ + +W KSGL
Sbjct: 69 ESAKRAVHLSDVVLRFCI--TVSHLNRALYFACDNVLWAGKSGL 110
>sp|Q99271|NAH1_YEAST Na(+)/H(+) antiporter OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=NHA1 PE=1 SV=1
Length = 985
Score = 31.6 bits (70), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 54/112 (48%), Gaps = 26/112 (23%)
Query: 87 GKFVQDVNALRNSHLDSLSREDLILSVIAYGGEGLYYFVEQFIWLAKSGLIDPKQSRSLQ 146
GKF Q V HL +L LS + +G+ + F++L+ + ++ P R +
Sbjct: 155 GKFAQRVPG----HLRNL------LSAESGCNDGMAF---PFLFLSMNLILHPGNGREIV 201
Query: 147 K----ISAWAE---------FIGYIGSISLKFRDLKMILEDEACLASTIEIA 185
K ++ E FIGY+G I+++F + K I++ E+ LA + +A
Sbjct: 202 KDWICVTILYECLFGCLLGCFIGYVGRITIRFAEKKNIIDRESFLAFYVVLA 253
>sp|Q148K5|PX11B_BOVIN Peroxisomal membrane protein 11B OS=Bos taurus GN=PEX11B PE=2 SV=1
Length = 258
Score = 31.2 bits (69), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 48/107 (44%), Gaps = 10/107 (9%)
Query: 35 AKRDGVDKLLKLSRYATKIILAS----SVLPETLPLTGRLKSFESSVGLSRKAFRLGKFV 90
A+ ++L + ++YA ++ + PE L +++ E + L RK RLG
Sbjct: 9 AQSQARERLCRAAQYACSLLGHALQKHGASPE---LQKQIRQLEGHLSLGRKLLRLGNSA 65
Query: 91 QDV-NALRNSHLDSLSREDLILSVIAYGGEGLYYFVEQFIWLAKSGL 136
+ +A R HL + I +++ LY+ + +W KSGL
Sbjct: 66 DALESAKRAVHLSDVVLRFCI--TVSHLNRALYFACDNVLWAGKSGL 110
>sp|Q9K678|PTMCB_BACHD PTS system mannitol-specific EIICB component OS=Bacillus halodurans
(strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153
/ C-125) GN=mtlA PE=3 SV=1
Length = 468
Score = 31.2 bits (69), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 49/105 (46%), Gaps = 12/105 (11%)
Query: 104 LSREDLILSVIAYGGEGLYYFVEQFIWLAKSGLI---DPKQSRSLQKISAWAEFIGYIGS 160
L + LIL+VIA G G++ FV L +GL+ P +L ++ E+ G +
Sbjct: 266 LMKPTLILAVIAGGMSGVFTFV-----LFNAGLVAVPSPGSIFALLAMTPRGEYAGVLAG 320
Query: 161 I----SLKFRDLKMILEDEACLASTIEIAISRGDGYKEEEQRMKK 201
+ + F +IL+ A + A S+ +G K +E +K+
Sbjct: 321 VIIATVVSFVIASIILKTSKATAEDLTEATSKMEGLKGKESSVKE 365
>sp|Q9Z210|PX11B_MOUSE Peroxisomal membrane protein 11B OS=Mus musculus GN=Pex11b PE=2
SV=1
Length = 259
Score = 30.8 bits (68), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 25/104 (24%), Positives = 47/104 (45%), Gaps = 4/104 (3%)
Query: 35 AKRDGVDKLLKLSRYATKIILASSVLPETLP-LTGRLKSFESSVGLSRKAFRLGKFVQDV 93
A+ ++L + ++YA ++ + P L +++ E + L RK RLG +
Sbjct: 9 AQSQARERLCRAAQYACSLLGHALQRHGASPELQKQIRQLEGHLSLGRKLLRLGNSTDAL 68
Query: 94 -NALRNSHLDSLSREDLILSVIAYGGEGLYYFVEQFIWLAKSGL 136
+A R HL + I +++ LY+ + +W KSGL
Sbjct: 69 ESAKRAVHLSDVVLRFCI--TVSHLNRALYFACDNVLWAGKSGL 110
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.135 0.370
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 80,457,319
Number of Sequences: 539616
Number of extensions: 3086215
Number of successful extensions: 9385
Number of sequences better than 100.0: 46
Number of HSP's better than 100.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 35
Number of HSP's that attempted gapping in prelim test: 9345
Number of HSP's gapped (non-prelim): 48
length of query: 235
length of database: 191,569,459
effective HSP length: 114
effective length of query: 121
effective length of database: 130,053,235
effective search space: 15736441435
effective search space used: 15736441435
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 59 (27.3 bits)