BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 039695
(605 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8VYH0|PP313_ARATH Pentatricopeptide repeat-containing protein At4g15720
OS=Arabidopsis thaliana GN=PCMP-H1 PE=2 SV=1
Length = 616
Score = 716 bits (1847), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 357/616 (57%), Positives = 460/616 (74%), Gaps = 11/616 (1%)
Query: 1 MKKSLTRNLIFTLAASSLTRQNKRSSCH--TKAHFIQQLQECKHLISLASVHSEILKSGF 58
MKK +N+ A S Q K H TKA + +L E + +H+ LK GF
Sbjct: 1 MKKGFIQNVHLAPATSLFVPQYKNDFFHLKTKAFLVHKLSESTNAAFTNLLHTLTLKLGF 60
Query: 59 LSNTFTLNHLINCYVRLKKTQVARQLFDEMLEPNVVSYTSLMAGYINMGQPQIALLLFQK 118
S+TFT+NHL+ YV+LK+ AR+LFDEM EPNVVS+TS+++GY +MG+PQ AL +FQK
Sbjct: 61 ASDTFTVNHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMGKPQNALSMFQK 120
Query: 119 MLGNL-VWPNEFTFATVIKACSMLADLITGKQIHTHIETFGFQYNLVVCSSLVDMYGKCN 177
M + V PNE+TFA+V KACS LA+ GK IH +E G + N+VV SSLVDMYGKCN
Sbjct: 121 MHEDRPVPPNEYTFASVFKACSALAESRIGKNIHARLEISGLRRNIVVSSSLVDMYGKCN 180
Query: 178 DVDGARRVFDLM--GCRNVVSWTSIIVAHAQNAQGHEALEMFREFNYQ-SRDRPNQHMLA 234
DV+ ARRVFD M RNVVSWTS+I A+AQNA+GHEA+E+FR FN + DR NQ MLA
Sbjct: 181 DVETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRSFNAALTSDRANQFMLA 240
Query: 235 SVINACASLGRLVSGKVAHGVVVRSGCEFNDVVASALVDMYAKCGSVNYSDKVFNRISNP 294
SVI+AC+SLGRL GKVAHG+V R G E N VVA++L+DMYAKCGS++ ++K+F RI
Sbjct: 241 SVISACSSLGRLQWGKVAHGLVTRGGYESNTVVATSLLDMYAKCGSLSCAEKIFLRIRCH 300
Query: 295 SVVTYTSMIVGAAKYGLGRFSLDLFNEMISRGIKPNDVTFVGVLHACSHSGLVDEGIQHL 354
SV++YTSMI+ AK+GLG ++ LF+EM++ I PN VT +GVLHACSHSGLV+EG+++L
Sbjct: 301 SVISYTSMIMAKAKHGLGEAAVKLFDEMVAGRINPNYVTLLGVLHACSHSGLVNEGLEYL 360
Query: 355 DSMYRKYGIIPDAKHYTCVVDMLGRTGRLDEAYKLAKSIQVDPDGGPLLWGTLLSASRLH 414
M KYG++PD++HYTCVVDMLGR GR+DEAY+LAK+I+V + G LLWG LLSA RLH
Sbjct: 361 SLMAEKYGVVPDSRHYTCVVDMLGRFGRVDEAYELAKTIEVGAEQGALLWGALLSAGRLH 420
Query: 415 GRVDIAVEASNQLIESNQQVANAYVTLSNTYALAGEWENVHSLRSEMKRTGIHKEPGCSW 474
GRV+I EAS +LI+SNQQV +AY+ LSN YA++G WE+ SLR EMKR+G KE CSW
Sbjct: 421 GRVEIVSEASKRLIQSNQQVTSAYIALSNAYAVSGGWEDSESLRLEMKRSGNVKERACSW 480
Query: 475 VEIRDQTYAFYAGNALFERGSEVLSLLRELERKMKERGYVG-----GKTGLVFVDVEDEA 529
+E +D Y F+AG+ + E+ L++LE++MKERG+ G + VFVDV++EA
Sbjct: 481 IENKDSVYVFHAGDLSCDESGEIERFLKDLEKRMKERGHRGSSSMITTSSSVFVDVDEEA 540
Query: 530 REEIVGLHSERLALAFGLISIPKGITIRIMKNLRMCRDCHDVFKLISDIVERDFVVRDVN 589
++E+V LH ERLALA+GL+ +P G TIRIM NLRMCRDCH+ FKLIS+IVER+ VVRDVN
Sbjct: 541 KDEMVSLHCERLALAYGLLHLPAGSTIRIMNNLRMCRDCHEAFKLISEIVEREIVVRDVN 600
Query: 590 RFHHFRNGSCSCGDFW 605
RFH F+NGSC+C D+W
Sbjct: 601 RFHCFKNGSCTCRDYW 616
>sp|Q9STF3|PP265_ARATH Pentatricopeptide repeat-containing protein At3g46790,
chloroplastic OS=Arabidopsis thaliana GN=CRR2 PE=2 SV=1
Length = 657
Score = 438 bits (1127), Expect = e-122, Method: Compositional matrix adjust.
Identities = 229/574 (39%), Positives = 343/574 (59%), Gaps = 11/574 (1%)
Query: 40 CKHLISLAS---VHSEILKSGFLSNTFTLNHLINCYVRLKKTQVARQLFDEMLEPNVVSY 96
C H SL+ VH IL +G + F LI Y L AR++FD+ + + +
Sbjct: 87 CGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVW 146
Query: 97 TSLMAGYINMGQPQIALLLFQKMLGNLVWPNEFTFATVIKAC----SMLADLITGKQIHT 152
+L G + L L+ KM V + FT+ V+KAC + L+ GK+IH
Sbjct: 147 NALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHA 206
Query: 153 HIETFGFQYNLVVCSSLVDMYGKCNDVDGARRVFDLMGCRNVVSWTSIIVAHAQNAQGHE 212
H+ G+ ++ + ++LVDMY + VD A VF M RNVVSW+++I +A+N + E
Sbjct: 207 HLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFE 266
Query: 213 ALEMFREFNYQSRDR-PNQHMLASVINACASLGRLVSGKVAHGVVVRSGCEFNDVVASAL 271
AL FRE +++D PN + SV+ ACASL L GK+ HG ++R G + V SAL
Sbjct: 267 ALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISAL 326
Query: 272 VDMYAKCGSVNYSDKVFNRISNPSVVTYTSMIVGAAKYGLGRFSLDLFNEMISRGIKPND 331
V MY +CG + +VF+R+ + VV++ S+I +G G+ ++ +F EM++ G P
Sbjct: 327 VTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTP 386
Query: 332 VTFVGVLHACSHSGLVDEGIQHLDSMYRKYGIIPDAKHYTCVVDMLGRTGRLDEAYKLAK 391
VTFV VL ACSH GLV+EG + ++M+R +GI P +HY C+VD+LGR RLDEA K+ +
Sbjct: 387 VTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQ 446
Query: 392 SIQVDPDGGPLLWGTLLSASRLHGRVDIAVEASNQLIESNQQVANAYVTLSNTYALAGEW 451
++ +P GP +WG+LL + R+HG V++A AS +L + A YV L++ YA A W
Sbjct: 447 DMRTEP--GPKVWGSLLGSCRIHGNVELAERASRRLFALEPKNAGNYVLLADIYAEAQMW 504
Query: 452 ENVHSLRSEMKRTGIHKEPGCSWVEIRDQTYAFYAGNALFERGSEVLSLLRELERKMKER 511
+ V ++ ++ G+ K PG W+E+R + Y+F + + ++ + L +L MKE+
Sbjct: 505 DEVKRVKKLLEHRGLQKLPGRCWMEVRRKMYSFVSVDEFNPLMEQIHAFLVKLAEDMKEK 564
Query: 512 GYVGGKTGLVFVDVEDEAREEIVGLHSERLALAFGLISIPKGITIRIMKNLRMCRDCHDV 571
GY+ G+++ ++E E +E IV HSE+LALAFGLI+ KG IRI KNLR+C DCH
Sbjct: 565 GYIPQTKGVLY-ELETEEKERIVLGHSEKLALAFGLINTSKGEPIRITKNLRLCEDCHLF 623
Query: 572 FKLISDIVERDFVVRDVNRFHHFRNGSCSCGDFW 605
K IS +E++ +VRDVNRFH F+NG CSCGD+W
Sbjct: 624 TKFISKFMEKEILVRDVNRFHRFKNGVCSCGDYW 657
Score = 115 bits (287), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 80/308 (25%), Positives = 149/308 (48%), Gaps = 9/308 (2%)
Query: 126 PNEFTFATVIKACSMLADLITGKQIHTHIETFGFQYNLVVCSSLVDMYGKCNDVDGARRV 185
P++ T+ +I C + L ++H HI G + + + L+ MY VD AR+V
Sbjct: 75 PSQQTYELLILCCGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKV 134
Query: 186 FDLMGCRNVVSWTSIIVAHAQNAQGHEALEMFREFN---YQSRDRPNQHMLASVINACAS 242
FD R + W ++ A G E L ++ + N +S ++L + + + +
Sbjct: 135 FDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECT 194
Query: 243 LGRLVSGKVAHGVVVRSGCEFNDVVASALVDMYAKCGSVNYSDKVFNRISNPSVVTYTSM 302
+ L+ GK H + R G + + + LVDMYA+ G V+Y+ VF + +VV++++M
Sbjct: 195 VNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAM 254
Query: 303 IVGAAKYGLGRFSLDLFNEMI--SRGIKPNDVTFVGVLHACSHSGLVDEGIQHLDSMYRK 360
I AK G +L F EM+ ++ PN VT V VL AC+ +++G + + +
Sbjct: 255 IACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQG-KLIHGYILR 313
Query: 361 YGIIPDAKHYTCVVDMLGRTGRLDEAYKLAKSIQVDPDGGPLLWGTLLSASRLHGRVDIA 420
G+ + +V M GR G+L+ ++ + D + W +L+S+ +HG A
Sbjct: 314 RGLDSILPVISALVTMYGRCGKLEVGQRVFDRMH---DRDVVSWNSLISSYGVHGYGKKA 370
Query: 421 VEASNQLI 428
++ +++
Sbjct: 371 IQIFEEML 378
Score = 54.7 bits (130), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/217 (20%), Positives = 93/217 (42%), Gaps = 6/217 (2%)
Query: 228 PNQHMLASVINACASLGRLVSGKVAHGVVVRSGCEFNDVVASALVDMYAKCGSVNYSDKV 287
P+Q +I C L H ++ +G + + +A+ L+ MY+ GSV+Y+ KV
Sbjct: 75 PSQQTYELLILCCGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKV 134
Query: 288 FNRISNPSVVTYTSMIVGAAKYGLGRFSLDLFNEMISRGIKPNDVTFVGVLHACSHSGLV 347
F++ ++ + ++ G G L L+ +M G++ + T+ VL AC S
Sbjct: 135 FDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECT 194
Query: 348 DEGI---QHLDSMYRKYGIIPDAKHYTCVVDMLGRTGRLDEAYKLAKSIQVDPDGGPLLW 404
+ + + + + G T +VDM R G +D A + + P + W
Sbjct: 195 VNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGM---PVRNVVSW 251
Query: 405 GTLLSASRLHGRVDIAVEASNQLIESNQQVANAYVTL 441
+++ +G+ A+ +++ + + VT+
Sbjct: 252 SAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTM 288
>sp|Q9LW63|PP251_ARATH Putative pentatricopeptide repeat-containing protein At3g23330
OS=Arabidopsis thaliana GN=PCMP-H32 PE=3 SV=1
Length = 715
Score = 436 bits (1122), Expect = e-121, Method: Compositional matrix adjust.
Identities = 231/642 (35%), Positives = 366/642 (57%), Gaps = 43/642 (6%)
Query: 3 KSLTRNLIFTLAASSLTRQNKRSSCHTKAHFIQQLQECKHLISL---ASVHSEILKSGFL 59
+ T +F+ A +S C F L+ C ++ L SVH I++ G
Sbjct: 78 RCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMD 137
Query: 60 SNTFTLNHLINCYVRL----KKTQVA--------------------------------RQ 83
+ +T N L+N Y +L K V R+
Sbjct: 138 CDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRR 197
Query: 84 LFDEMLEPNVVSYTSLMAGYINMGQPQIALLLFQKMLGNLVWPNEFTFATVIKACSMLAD 143
+F+ M +VVSY +++AGY G + AL + ++M + P+ FT ++V+ S D
Sbjct: 198 VFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVD 257
Query: 144 LITGKQIHTHIETFGFQYNLVVCSSLVDMYGKCNDVDGARRVFDLMGCRNVVSWTSIIVA 203
+I GK+IH ++ G ++ + SSLVDMY K ++ + RVF + CR+ +SW S++
Sbjct: 258 VIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAG 317
Query: 204 HAQNAQGHEALEMFREFNYQSRDRPNQHMLASVINACASLGRLVSGKVAHGVVVRSGCEF 263
+ QN + +EAL +FR+ ++ +P +SVI ACA L L GK HG V+R G
Sbjct: 318 YVQNGRYNEALRLFRQM-VTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGS 376
Query: 264 NDVVASALVDMYAKCGSVNYSDKVFNRISNPSVVTYTSMIVGAAKYGLGRFSLDLFNEMI 323
N +ASALVDMY+KCG++ + K+F+R++ V++T++I+G A +G G ++ LF EM
Sbjct: 377 NIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMK 436
Query: 324 SRGIKPNDVTFVGVLHACSHSGLVDEGIQHLDSMYRKYGIIPDAKHYTCVVDMLGRTGRL 383
+G+KPN V FV VL ACSH GLVDE + +SM + YG+ + +HY V D+LGR G+L
Sbjct: 437 RQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKL 496
Query: 384 DEAYKLAKSIQVDPDGGPLLWGTLLSASRLHGRVDIAVEASNQLIESNQQVANAYVTLSN 443
+EAY + V+P G +W TLLS+ +H +++A + + ++ + + AYV + N
Sbjct: 497 EEAYNFISKMCVEPTGS--VWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAYVLMCN 554
Query: 444 TYALAGEWENVHSLRSEMKRTGIHKEPGCSWVEIRDQTYAFYAGNALFERGSEVLSLLRE 503
YA G W+ + LR M++ G+ K+P CSW+E++++T+ F +G+ ++ L+
Sbjct: 555 MYASNGRWKEMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDKINEFLKA 614
Query: 504 LERKMKERGYVGGKTGLVFVDVEDEAREEIVGLHSERLALAFGLISIPKGITIRIMKNLR 563
+ +M++ GYV +G V DV++E + E++ HSERLA+AFG+I+ G TIR+ KN+R
Sbjct: 615 VMEQMEKEGYVADTSG-VLHDVDEEHKRELLFGHSERLAVAFGIINTEPGTTIRVTKNIR 673
Query: 564 MCRDCHDVFKLISDIVERDFVVRDVNRFHHFRNGSCSCGDFW 605
+C DCH K IS I ER+ +VRD +RFHHF G+CSCGD+W
Sbjct: 674 ICTDCHVAIKFISKITEREIIVRDNSRFHHFNRGNCSCGDYW 715
Score = 149 bits (377), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 119/450 (26%), Positives = 213/450 (47%), Gaps = 47/450 (10%)
Query: 49 VHSEILKSGFLSNTFTLNHLINCYVRLKKTQVARQLFDEMLEPNVVSYTSLMAGYINMGQ 108
+H++ +++ LS+T + + +I+ Y LK A LF + P V+++ S++ + +
Sbjct: 27 LHAQFIRTQSLSHT-SASIVISIYTNLKLLHEALLLFKTLKSPPVLAWKSVIRCFTDQSL 85
Query: 109 PQIALLLFQKMLGNLVWPNEFTFATVIKACSMLADLITGKQIHTHIETFGFQYNLVVCSS 168
AL F +M + P+ F +V+K+C+M+ DL G+ +H I G +L ++
Sbjct: 86 FSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNA 145
Query: 169 LVDMYGKC-------------------------NDV-----------DGARRVFDLMGCR 192
L++MY K DV D RRVF++M +
Sbjct: 146 LMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFEVMPRK 205
Query: 193 NVVSWTSIIVAHAQNAQGHEALEMFREFNYQSRDRPNQHMLASVINACASLGRLVSGKVA 252
+VVS+ +II +AQ+ +AL M RE + +P+ L+SV+ + ++ GK
Sbjct: 206 DVVSYNTIIAGYAQSGMYEDALRMVREMG-TTDLKPDSFTLSSVLPIFSEYVDVIKGKEI 264
Query: 253 HGVVVRSGCEFNDVVASALVDMYAKCGSVNYSDKVFNRISNPSVVTYTSMIVGAAKYGLG 312
HG V+R G + + + S+LVDMYAK + S++VF+R+ +++ S++ G + G
Sbjct: 265 HGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRY 324
Query: 313 RFSLDLFNEMISRGIKPNDVTFVGVLHACSHSGLVDEGIQHLDSMYRKYGIIPDAKHYTC 372
+L LF +M++ +KP V F V+ AC+H + G Q L + G + +
Sbjct: 325 NEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQ-LHGYVLRGGFGSNIFIASA 383
Query: 373 VVDMLGRTGRLDEAYKLAKSIQVDPDGGPLLWGTLLSASRLHGR----VDIAVEASNQLI 428
+VDM + G + A K+ + V + + W ++ LHG V + E Q +
Sbjct: 384 LVDMYSKCGNIKAARKIFDRMNVLDE---VSWTAIIMGHALHGHGHEAVSLFEEMKRQGV 440
Query: 429 ESNQQVANAYVTLSNTYALAGE-WENVHSL 457
+ NQ A +T + L E W +S+
Sbjct: 441 KPNQVAFVAVLTACSHVGLVDEAWGYFNSM 470
Score = 73.6 bits (179), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 108/472 (22%), Positives = 187/472 (39%), Gaps = 93/472 (19%)
Query: 133 TVIKACSMLADLITGKQIHTH-IETFGFQYNLVVCSSLVDMYGKCNDVDGARRVFDLMGC 191
T+IK + + KQ+H I T + S ++ +Y + A +F +
Sbjct: 10 TLIKNPTRIKSKSQAKQLHAQFIRTQSLSHT--SASIVISIYTNLKLLHEALLLFKTLKS 67
Query: 192 RNVVSWTSIIVAHAQNAQGHEALEMFREFNYQSRDRPNQHMLASVINACASLGRLVSGKV 251
V++W S+I + +AL F E R P+ ++ SV+ +C + L G+
Sbjct: 68 PPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRC-PDHNVFPSVLKSCTMMMDLRFGES 126
Query: 252 AHGVVVRSGCEFNDVVASALVDMYAK---------CGSV---------NYSD-------- 285
HG +VR G + + +AL++MYAK G+V N D
Sbjct: 127 VHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETC 186
Query: 286 ----------KVFNRISNPSVVTYTSMIVGAAKYGLGRFSLDLFNEMISRGIKPNDVTFV 335
+VF + VV+Y ++I G A+ G+ +L + EM + +KP+ T
Sbjct: 187 IMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLS 246
Query: 336 GVLHACSHSGLVDEGIQHLDSMYRKYGIIPDAKHYTCVVDMLGRTGRLDEAYKLAKSIQV 395
VL S V +G + + RK GI D + +VDM ++ R++++ ++ +
Sbjct: 247 SVLPIFSEYVDVIKGKEIHGYVIRK-GIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYC 305
Query: 396 DPDGGPLLWGTLLSASRLHGRVDIAVEASNQLIESNQQVANAYVTLSNT----------- 444
DG + W +L++ +GR + A+ Q++ + +V V S+
Sbjct: 306 R-DG--ISWNSLVAGYVQNGRYNEALRLFRQMVTA--KVKPGAVAFSSVIPACAHLATLH 360
Query: 445 -------YALAGEW-----------------ENVHSLRSEMKRTGIHKEPGCSWVEIRDQ 480
Y L G + N+ + R R + E SW
Sbjct: 361 LGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDE--VSWT----- 413
Query: 481 TYAFYAGNALFERGSEVLSLLRELER---KMKERGYVGGKTGLVFVDVEDEA 529
A G+AL G E +SL E++R K + +V T V + DEA
Sbjct: 414 --AIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEA 463
>sp|O82380|PP175_ARATH Pentatricopeptide repeat-containing protein At2g29760,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H33 PE=2
SV=1
Length = 738
Score = 428 bits (1100), Expect = e-119, Method: Compositional matrix adjust.
Identities = 226/609 (37%), Positives = 341/609 (55%), Gaps = 33/609 (5%)
Query: 28 HTKAHFIQQLQECKHLISLASVHSEILKSGFLSNTFTLNHLINCYVRLKKTQVARQLFDE 87
+T I+ E L S+H +KS S+ F N LI+CY A ++F
Sbjct: 132 YTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTT 191
Query: 88 MLEPNVVSYTSLMAGYINMGQPQIALLLFQKMLGNLVWPNEFTFATVIKACSMLADLITG 147
+ E +VVS+ S++ G++ G P AL LF+KM V + T V+ AC+ + +L G
Sbjct: 192 IKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFG 251
Query: 148 KQIHTHIETFGFQYNLVVCSSLVDMYGKCNDVDGARRVFDL------------------- 188
+Q+ ++IE NL + ++++DMY KC ++ A+R+FD
Sbjct: 252 RQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAIS 311
Query: 189 ------------MGCRNVVSWTSIIVAHAQNAQGHEALEMFREFNYQSRDRPNQHMLASV 236
M +++V+W ++I A+ QN + +EAL +F E Q + NQ L S
Sbjct: 312 EDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVST 371
Query: 237 INACASLGRLVSGKVAHGVVVRSGCEFNDVVASALVDMYAKCGSVNYSDKVFNRISNPSV 296
++ACA +G L G+ H + + G N V SAL+ MY+KCG + S +VFN + V
Sbjct: 372 LSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDV 431
Query: 297 VTYTSMIVGAAKYGLGRFSLDLFNEMISRGIKPNDVTFVGVLHACSHSGLVDEGIQHLDS 356
+++MI G A +G G ++D+F +M +KPN VTF V ACSH+GLVDE
Sbjct: 432 FVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQ 491
Query: 357 MYRKYGIIPDAKHYTCVVDMLGRTGRLDEAYKLAKSIQVDPDGGPLLWGTLLSASRLHGR 416
M YGI+P+ KHY C+VD+LGR+G L++A K +++ + P +WG LL A ++H
Sbjct: 492 MESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTS--VWGALLGACKIHAN 549
Query: 417 VDIAVEASNQLIESNQQVANAYVTLSNTYALAGEWENVHSLRSEMKRTGIHKEPGCSWVE 476
+++A A +L+E + A+V LSN YA G+WENV LR M+ TG+ KEPGCS +E
Sbjct: 550 LNLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIE 609
Query: 477 IRDQTYAFYAGNALFERGSEVLSLLRELERKMKERGYVGGKTGLVFVDVEDEAREEIVGL 536
I + F +G+ +V L E+ K+K GY + ++ + E+E +E+ + L
Sbjct: 610 IDGMIHEFLSGDNAHPMSEKVYGKLHEVMEKLKSNGYEPEISQVLQIIEEEEMKEQSLNL 669
Query: 537 HSERLALAFGLISIPKGITIRIMKNLRMCRDCHDVFKLISDIVERDFVVRDVNRFHHFRN 596
HSE+LA+ +GLIS IR++KNLR+C DCH V KLIS + +R+ +VRD RFHHFRN
Sbjct: 670 HSEKLAICYGLISTEAPKVIRVIKNLRVCGDCHSVAKLISQLYDREIIVRDRYRFHHFRN 729
Query: 597 GSCSCGDFW 605
G CSC DFW
Sbjct: 730 GQCSCNDFW 738
Score = 157 bits (396), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 110/465 (23%), Positives = 228/465 (49%), Gaps = 44/465 (9%)
Query: 17 SLTRQNKRSSCHTKAHFIQQLQECKHLISLASVHSEILKSGFLSNTFTLNHL--INCYVR 74
+ + N+ ++ + ++ I ++ C L L H ++++G S+ ++ + L +
Sbjct: 17 NFSNPNQPTTNNERSRHISLIERCVSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSS 76
Query: 75 LKKTQVARQLFDEMLEPNVVSYTSLMAGYINMGQPQIALLLFQKMLG-NLVWPNEFTFAT 133
+ AR++FDE+ +PN ++ +L+ Y + P +++ F M+ + +PN++TF
Sbjct: 77 FASLEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPF 136
Query: 134 VIKACSMLADLITGKQIHTHIETFGFQYNLVVCSSLVDMYGKCNDVDGARRVFDLMGCRN 193
+IKA + ++ L G+ +H ++ V +SL+ Y C D+D A +VF + ++
Sbjct: 137 LIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKD 196
Query: 194 VVSWTSIIVAHAQNAQGHEALEMFREFNYQSRDRPNQHM-LASVINACASLGRLVSGKVA 252
VVSW S+I Q +ALE+F++ +S D H+ + V++ACA + L G+
Sbjct: 197 VVSWNSMINGFVQKGSPDKALELFKKM--ESEDVKASHVTMVGVLSACAKIRNLEFGRQV 254
Query: 253 HGVVVRSGCEFNDVVASALVDMYAKCGSVNYSDKVFNRISNPSVVTYTSMIVGAA----- 307
+ + N +A+A++DMY KCGS+ + ++F+ + VT+T+M+ G A
Sbjct: 255 CSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDY 314
Query: 308 --------------------------KYGLGRFSLDLFNEM-ISRGIKPNDVTFVGVLHA 340
+ G +L +F+E+ + + +K N +T V L A
Sbjct: 315 EAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSA 374
Query: 341 CSHSGLVDEGIQHLDSMYRKYGIIPDAKHYTCVVDMLGRTGRLDEAYKLAKSIQVDPDGG 400
C+ G ++ G + + S +K+GI + + ++ M + G L+++ ++ S++
Sbjct: 375 CAQVGALELG-RWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVE---KRD 430
Query: 401 PLLWGTLLSASRLHGRVDIAVEASNQLIESNQQVANAYVTLSNTY 445
+W ++ +HG + AV+ ++ E+N V VT +N +
Sbjct: 431 VFVWSAMIGGLAMHGCGNEAVDMFYKMQEAN--VKPNGVTFTNVF 473
>sp|Q9LIC3|PP227_ARATH Putative pentatricopeptide repeat-containing protein At3g13770,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H85 PE=3
SV=1
Length = 628
Score = 425 bits (1093), Expect = e-118, Method: Compositional matrix adjust.
Identities = 226/559 (40%), Positives = 341/559 (61%), Gaps = 6/559 (1%)
Query: 49 VHSEILKSGFLSNTFTLNHLINCYVRLKKTQVARQLFDEMLEPNVVSYTSLMAGYINMGQ 108
VH+ ++K+ +L T+ L+ Y + + AR++ DEM E NVVS+T++++ Y G
Sbjct: 74 VHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGH 133
Query: 109 PQIALLLFQKMLGNLVWPNEFTFATVIKACSMLADLITGKQIHTHIETFGFQYNLVVCSS 168
AL +F +M+ + PNEFTFATV+ +C + L GKQIH I + + ++ V SS
Sbjct: 134 SSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSS 193
Query: 169 LVDMYGKCNDVDGARRVFDLMGCRNVVSWTSIIVAHAQNAQGHEALEMFREFNYQSRDRP 228
L+DMY K + AR +F+ + R+VVS T+II +AQ EALEMF + + P
Sbjct: 194 LLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMS-P 252
Query: 229 NQHMLASVINACASLGRLVSGKVAHGVVVRSGCEFNDVVASALVDMYAKCGSVNYSDKVF 288
N AS++ A + L L GK AH V+R F V+ ++L+DMY+KCG+++Y+ ++F
Sbjct: 253 NYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLF 312
Query: 289 NRISNPSVVTYTSMIVGAAKYGLGRFSLDLFNEM-ISRGIKPNDVTFVGVLHACSHSGLV 347
+ + + +++ +M+VG +K+GLGR L+LF M + +KP+ VT + VL CSH +
Sbjct: 313 DNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRME 372
Query: 348 DEGIQHLDSMYR-KYGIIPDAKHYTCVVDMLGRTGRLDEAYKLAKSIQVDPDGGPLLWGT 406
D G+ D M +YG P +HY C+VDMLGR GR+DEA++ K + P G L G+
Sbjct: 373 DTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFIKRMPSKPTAGVL--GS 430
Query: 407 LLSASRLHGRVDIAVEASNQLIESNQQVANAYVTLSNTYALAGEWENVHSLRSEMKRTGI 466
LL A R+H VDI +LIE + A YV LSN YA AG W +V+++R+ M + +
Sbjct: 431 LLGACRVHLSVDIGESVGRRLIEIEPENAGNYVILSNLYASAGRWADVNNVRAMMMQKAV 490
Query: 467 HKEPGCSWVEIRDQTYAFYAGNALFERGSEVLSLLRELERKMKERGYVGGKTGLVFVDVE 526
KEPG SW++ + F+A + R EVL+ ++E+ KMK+ GYV V DV+
Sbjct: 491 TKEPGRSWIQHEQTLHYFHANDRTHPRREEVLAKMKEISIKMKQAGYV-PDLSCVLYDVD 549
Query: 527 DEAREEIVGLHSERLALAFGLISIPKGITIRIMKNLRMCRDCHDVFKLISDIVERDFVVR 586
+E +E+++ HSE+LAL FGLI+ +GI IR+ KNLR+C DCH+ K+ S + ER+ +R
Sbjct: 550 EEQKEKMLLGHSEKLALTFGLIATGEGIPIRVFKNLRICVDCHNFAKIFSKVFEREVSLR 609
Query: 587 DVNRFHHFRNGSCSCGDFW 605
D NRFH +G CSCGD+W
Sbjct: 610 DKNRFHQIVDGICSCGDYW 628
Score = 57.4 bits (137), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 78/159 (49%), Gaps = 1/159 (0%)
Query: 231 HMLASVINACASLGRLVSGKVAHGVVVRSGCEFNDVVASALVDMYAKCGSVNYSDKVFNR 290
H +++NAC L G+ H ++++ + + L+ Y KC + + KV +
Sbjct: 53 HGYDALLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDE 112
Query: 291 ISNPSVVTYTSMIVGAAKYGLGRFSLDLFNEMISRGIKPNDVTFVGVLHACSHSGLVDEG 350
+ +VV++T+MI ++ G +L +F EM+ KPN+ TF VL +C + + G
Sbjct: 113 MPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLG 172
Query: 351 IQHLDSMYRKYGIIPDAKHYTCVVDMLGRTGRLDEAYKL 389
Q + + K+ + ++DM + G++ EA ++
Sbjct: 173 KQ-IHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREI 210
>sp|Q9LTV8|PP224_ARATH Pentatricopeptide repeat-containing protein At3g12770
OS=Arabidopsis thaliana GN=PCMP-H43 PE=2 SV=1
Length = 694
Score = 423 bits (1088), Expect = e-117, Method: Compositional matrix adjust.
Identities = 225/579 (38%), Positives = 336/579 (58%), Gaps = 7/579 (1%)
Query: 29 TKAHFIQQLQECKHLISLASVHSEILKSGFLSNTFTLNHLINCYVRLKKTQVARQLFDEM 88
T H ++ HL VH+++ + GF ++ F N LI Y + ++ AR +F+ +
Sbjct: 121 TFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGL 180
Query: 89 LEP--NVVSYTSLMAGYINMGQPQIALLLFQKMLGNLVWPNEFTFATVIKACSMLADLIT 146
P +VS+T++++ Y G+P AL +F +M V P+ +V+ A + L DL
Sbjct: 181 PLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQ 240
Query: 147 GKQIHTHIETFGFQYNLVVCSSLVDMYGKCNDVDGARRVFDLMGCRNVVSWTSIIVAHAQ 206
G+ IH + G + + SL MY KC V A+ +FD M N++ W ++I +A+
Sbjct: 241 GRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAK 300
Query: 207 NAQGHEALEMFREFNYQSRDRPNQHMLASVINACASLGRLVSGKVAHGVVVRSGCEFNDV 266
N EA++MF E RP+ + S I+ACA +G L + + V RS +
Sbjct: 301 NGYAREAIDMFHEM-INKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVF 359
Query: 267 VASALVDMYAKCGSVNYSDKVFNRISNPSVVTYTSMIVGAAKYGLGRFSLDLFNEMISRG 326
++SAL+DM+AKCGSV + VF+R + VV +++MIVG +G R ++ L+ M G
Sbjct: 360 ISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGG 419
Query: 327 IKPNDVTFVGVLHACSHSGLVDEGIQHLDSMYRKYGIIPDAKHYTCVVDMLGRTGRLDEA 386
+ PNDVTF+G+L AC+HSG+V EG + M + I P +HY CV+D+LGR G LD+A
Sbjct: 420 VHPNDVTFLGLLMACNHSGMVREGWWFFNRM-ADHKINPQQQHYACVIDLLGRAGHLDQA 478
Query: 387 YKLAKSIQVDPDGGPLLWGTLLSASRLHGRVDIAVEASNQLIESNQQVANAYVTLSNTYA 446
Y++ K + V P G +WG LLSA + H V++ A+ QL + YV LSN YA
Sbjct: 479 YEVIKCMPVQP--GVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYA 536
Query: 447 LAGEWENVHSLRSEMKRTGIHKEPGCSWVEIRDQTYAFYAGNALFERGSEVLSLLRELER 506
A W+ V +R MK G++K+ GCSWVE+R + AF G+ R E+ + +E
Sbjct: 537 AARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEIERQVEWIES 596
Query: 507 KMKERGYVGGKTGLVFVDVEDEAREEIVGLHSERLALAFGLISIPKGITIRIMKNLRMCR 566
++KE G+V K + D+ DE EE + HSER+A+A+GLIS P+G +RI KNLR C
Sbjct: 597 RLKEGGFVANKDASLH-DLNDEEAEETLCSHSERIAIAYGLISTPQGTPLRITKNLRACV 655
Query: 567 DCHDVFKLISDIVERDFVVRDVNRFHHFRNGSCSCGDFW 605
+CH KLIS +V+R+ VVRD NRFHHF++G CSCGD+W
Sbjct: 656 NCHAATKLISKLVDREIVVRDTNRFHHFKDGVCSCGDYW 694
Score = 206 bits (523), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 124/412 (30%), Positives = 213/412 (51%), Gaps = 15/412 (3%)
Query: 15 ASSLTRQNKRSSCHTKAHFIQQLQECKHLISLASVHSEILKSGFLSNTFTLNHLINCYVR 74
AS L N S H+ + + + H L +H+ +L G + F + LI+
Sbjct: 8 ASPLLYTN--SGIHSDSFYASLIDSATHKAQLKQIHARLLVLGLQFSGFLITKLIHASSS 65
Query: 75 LKKTQVARQLFDEMLEPNVVSYTSLMAGYINMGQPQIALLLFQKMLGNLVWPNEFTFATV 134
ARQ+FD++ P + + +++ GY Q ALL++ M V P+ FTF +
Sbjct: 66 FGDITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHL 125
Query: 135 IKACSMLADLITGKQIHTHIETFGFQYNLVVCSSLVDMYGKCNDVDGARRVFDLMGC--R 192
+KACS L+ L G+ +H + GF ++ V + L+ +Y KC + AR VF+ + R
Sbjct: 126 LKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPER 185
Query: 193 NVVSWTSIIVAHAQNAQGHEALEMFREFNYQSRDRPNQHMLASVINACASLGRLVSGKVA 252
+VSWT+I+ A+AQN + EALE+F + + +P+ L SV+NA L L G+
Sbjct: 186 TIVSWTAIVSAYAQNGEPMEALEIFSQMR-KMDVKPDWVALVSVLNAFTCLQDLKQGRSI 244
Query: 253 HGVVVRSGCEFNDVVASALVDMYAKCGSVNYSDKVFNRISNPSVVTYTSMIVGAAKYGLG 312
H VV+ G E + +L MYAKCG V + +F+++ +P+++ + +MI G AK G
Sbjct: 245 HASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYA 304
Query: 313 RFSLDLFNEMISRGIKPNDVTFVGVLHACSHSGLVDEGIQHLDSMYRKYG---IIPDAKH 369
R ++D+F+EMI++ ++P+ ++ + AC+ G ++ SMY G D
Sbjct: 305 REAIDMFHEMINKDVRPDTISITSAISACAQVG----SLEQARSMYEYVGRSDYRDDVFI 360
Query: 370 YTCVVDMLGRTGRLDEAYKLAKSIQVDPDGGPLLWGTLLSASRLHGRVDIAV 421
+ ++DM + G ++ A +L +D D ++W ++ LHGR A+
Sbjct: 361 SSALIDMFAKCGSVEGA-RLVFDRTLDRD--VVVWSAMIVGYGLHGRAREAI 409
>sp|Q9LIQ7|PP252_ARATH Pentatricopeptide repeat-containing protein At3g24000,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H87 PE=2
SV=1
Length = 633
Score = 422 bits (1086), Expect = e-117, Method: Compositional matrix adjust.
Identities = 223/574 (38%), Positives = 343/574 (59%), Gaps = 12/574 (2%)
Query: 37 LQEC---KHLISLASVHSEILKSGFLSNTFTLNHLINCYVRLKKTQVARQLFDEMLEPNV 93
L++C K LI VH+ IL+S F + N L+N Y + + AR++F++M + +
Sbjct: 67 LKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDF 126
Query: 94 VSYTSLMAGYINMGQPQIALLLFQKMLGNLVWPNEFTFATVIKACSMLADLITGKQIHTH 153
V++T+L++GY +P ALL F +ML PNEFT ++VIKA + G Q+H
Sbjct: 127 VTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGF 186
Query: 154 IETFGFQYNLVVCSSLVDMYGKCNDVDGARRVFDLMGCRNVVSWTSIIVAHAQNAQGHEA 213
GF N+ V S+L+D+Y + +D A+ VFD + RN VSW ++I HA+ + +A
Sbjct: 187 CVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKA 246
Query: 214 LEMFREFNYQSRD--RPNQHMLASVINACASLGRLVSGKVAHGVVVRSGCEFNDVVASAL 271
LE+F+ RD RP+ AS+ AC+S G L GK H +++SG + + L
Sbjct: 247 LELFQGM---LRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTL 303
Query: 272 VDMYAKCGSVNYSDKVFNRISNPSVVTYTSMIVGAAKYGLGRFSLDLFNEMISRGIKPND 331
+DMYAK GS++ + K+F+R++ VV++ S++ A++G G+ ++ F EM GI+PN+
Sbjct: 304 LDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNE 363
Query: 332 VTFVGVLHACSHSGLVDEGIQHLDSMYRKYGIIPDAKHYTCVVDMLGRTGRLDEAYKLAK 391
++F+ VL ACSHSGL+DEG + + M +K GI+P+A HY VVD+LGR G L+ A + +
Sbjct: 364 ISFLSVLTACSHSGLLDEGWHYYELM-KKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIE 422
Query: 392 SIQVDPDGGPLLWGTLLSASRLHGRVDIAVEASNQLIESNQQVANAYVTLSNTYALAGEW 451
+ ++P +W LL+A R+H ++ A+ + E + +V L N YA G W
Sbjct: 423 EMPIEPTAA--IWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRW 480
Query: 452 ENVHSLRSEMKRTGIHKEPGCSWVEIRDQTYAFYAGNALFERGSEVLSLLRELERKMKER 511
+ +R +MK +G+ KEP CSWVEI + + F A + + E+ E+ K+KE
Sbjct: 481 NDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIARKWEEVLAKIKEL 540
Query: 512 GYVGGKTGLVFVDVEDEAREEIVGLHSERLALAFGLISIPKGITIRIMKNLRMCRDCHDV 571
GYV T V V V+ + RE + HSE++ALAF L++ P G TI I KN+R+C DCH
Sbjct: 541 GYV-PDTSHVIVHVDQQEREVNLQYHSEKIALAFALLNTPPGSTIHIKKNIRVCGDCHTA 599
Query: 572 FKLISDIVERDFVVRDVNRFHHFRNGSCSCGDFW 605
KL S +V R+ +VRD NRFHHF++G+CSC D+W
Sbjct: 600 IKLASKVVGREIIVRDTNRFHHFKDGNCSCKDYW 633
Score = 142 bits (357), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 89/292 (30%), Positives = 162/292 (55%), Gaps = 19/292 (6%)
Query: 131 FATVIKACSMLADLITGKQIHTHIETFGFQYNLVVCSSLVDMYGKCNDVDGARRVFDLMG 190
+ T++K C++ LI G+ +H HI F++++V+ ++L++MY KC ++ AR+VF+ M
Sbjct: 63 YNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMP 122
Query: 191 CRNVVSWTSIIVAHAQNAQGHEALEMFRE---FNYQSRDRPNQHMLASVINACASLGRLV 247
R+ V+WT++I ++Q+ + +AL F + F Y PN+ L+SVI A A+ R
Sbjct: 123 QRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYS----PNEFTLSSVIKAAAAERRGC 178
Query: 248 SGKVAHGVVVRSGCEFNDVVASALVDMYAKCGSVNYSDKVFNRISNPSVVTYTSMIVGAA 307
G HG V+ G + N V SAL+D+Y + G ++ + VF+ + + + V++ ++I G A
Sbjct: 179 CGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHA 238
Query: 308 KYGLGRFSLDLFNEMISRGIKPNDVTFVGVLHACSHSGLVDEGIQHLDSMYRKYGIIPDA 367
+ +L+LF M+ G +P+ ++ + ACS +G +++G + + + K G A
Sbjct: 239 RRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQG-KWVHAYMIKSGEKLVA 297
Query: 368 KHYTCVVDMLGRTGRLDEAYK----LAKSIQVDPDGGPLLWGTLLSASRLHG 415
++DM ++G + +A K LAK V W +LL+A HG
Sbjct: 298 FAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVS-------WNSLLTAYAQHG 342
>sp|Q3E6Q1|PPR32_ARATH Pentatricopeptide repeat-containing protein At1g11290
OS=Arabidopsis thaliana GN=PCMP-H40 PE=2 SV=1
Length = 809
Score = 421 bits (1083), Expect = e-117, Method: Compositional matrix adjust.
Identities = 226/564 (40%), Positives = 335/564 (59%), Gaps = 6/564 (1%)
Query: 43 LISLA-SVHSEILKSGFLSNTFTLNHLINCYVRLKKTQVARQLFDEMLEPNVVSYTSLMA 101
LIS+ +H ++SGF S L++ Y + + ARQLFD MLE NVVS+ S++
Sbjct: 251 LISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMID 310
Query: 102 GYINMGQPQIALLLFQKMLGNLVWPNEFTFATVIKACSMLADLITGKQIHTHIETFGFQY 161
Y+ P+ A+L+FQKML V P + + + AC+ L DL G+ IH G
Sbjct: 311 AYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDR 370
Query: 162 NLVVCSSLVDMYGKCNDVDGARRVFDLMGCRNVVSWTSIIVAHAQNAQGHEALEMFREFN 221
N+ V +SL+ MY KC +VD A +F + R +VSW ++I+ AQN + +AL F +
Sbjct: 371 NVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMR 430
Query: 222 YQSRDRPNQHMLASVINACASLGRLVSGKVAHGVVVRSGCEFNDVVASALVDMYAKCGSV 281
++ +P+ SVI A A L K HGVV+RS + N V +ALVDMYAKCG++
Sbjct: 431 SRTV-KPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAI 489
Query: 282 NYSDKVFNRISNPSVVTYTSMIVGAAKYGLGRFSLDLFNEMISRGIKPNDVTFVGVLHAC 341
+ +F+ +S V T+ +MI G +G G+ +L+LF EM IKPN VTF+ V+ AC
Sbjct: 490 MIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISAC 549
Query: 342 SHSGLVDEGIQHLDSMYRKYGIIPDAKHYTCVVDMLGRTGRLDEAYKLAKSIQVDPDGGP 401
SHSGLV+ G++ M Y I HY +VD+LGR GRL+EA+ + V P
Sbjct: 550 SHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVN- 608
Query: 402 LLWGTLLSASRLHGRVDIAVEASNQLIESNQQVANAYVTLSNTYALAGEWENVHSLRSEM 461
++G +L A ++H V+ A +A+ +L E N +V L+N Y A WE V +R M
Sbjct: 609 -VYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSM 667
Query: 462 KRTGIHKEPGCSWVEIRDQTYAFYAGNALFERGSEVLSLLRELERKMKERGYVGGKTGLV 521
R G+ K PGCS VEI+++ ++F++G+ ++ + L +L +KE GYV T LV
Sbjct: 668 LRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPDSKKIYAFLEKLICHIKEAGYV-PDTNLV 726
Query: 522 FVDVEDEAREEIVGLHSERLALAFGLISIPKGITIRIMKNLRMCRDCHDVFKLISDIVER 581
+ VE++ +E+++ HSE+LA++FGL++ G TI + KNLR+C DCH+ K IS + R
Sbjct: 727 -LGVENDVKEQLLSTHSEKLAISFGLLNTTAGTTIHVRKNLRVCADCHNATKYISLVTGR 785
Query: 582 DFVVRDVNRFHHFRNGSCSCGDFW 605
+ VVRD+ RFHHF+NG+CSCGD+W
Sbjct: 786 EIVVRDMQRFHHFKNGACSCGDYW 809
Score = 181 bits (459), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 99/294 (33%), Positives = 172/294 (58%), Gaps = 1/294 (0%)
Query: 49 VHSEILKSGFLSNTFTLNHLINCYVRLKKTQVARQLFDEMLEPNVVSYTSLMAGYINMGQ 108
+H ++KSGF + F + L N Y + ++ AR++FD M E ++VS+ +++AGY G
Sbjct: 157 IHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGM 216
Query: 109 PQIALLLFQKMLGNLVWPNEFTFATVIKACSMLADLITGKQIHTHIETFGFQYNLVVCSS 168
++AL + + M + P+ T +V+ A S L + GK+IH + GF + + ++
Sbjct: 217 ARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTA 276
Query: 169 LVDMYGKCNDVDGARRVFDLMGCRNVVSWTSIIVAHAQNAQGHEALEMFREFNYQSRDRP 228
LVDMY KC ++ AR++FD M RNVVSW S+I A+ QN EA+ +F++ +P
Sbjct: 277 LVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKM-LDEGVKP 335
Query: 229 NQHMLASVINACASLGRLVSGKVAHGVVVRSGCEFNDVVASALVDMYAKCGSVNYSDKVF 288
+ ++ACA LG L G+ H + V G + N V ++L+ MY KC V+ + +F
Sbjct: 336 TDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMF 395
Query: 289 NRISNPSVVTYTSMIVGAAKYGLGRFSLDLFNEMISRGIKPNDVTFVGVLHACS 342
++ + ++V++ +MI+G A+ G +L+ F++M SR +KP+ T+V V+ A +
Sbjct: 396 GKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIA 449
Score = 172 bits (435), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 98/314 (31%), Positives = 170/314 (54%), Gaps = 1/314 (0%)
Query: 37 LQECKHLISLASVHSEILKSGFLSNTFTLNHLINCYVRLKKTQVARQLFDEMLEPNVVSY 96
L+ C L L + + K+G F L++ + R A ++F+ + V Y
Sbjct: 44 LERCSSLKELRQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLY 103
Query: 97 TSLMAGYINMGQPQIALLLFQKMLGNLVWPNEFTFATVIKACSMLADLITGKQIHTHIET 156
+++ G+ + AL F +M + V P + F ++K C A+L GK+IH +
Sbjct: 104 HTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVK 163
Query: 157 FGFQYNLVVCSSLVDMYGKCNDVDGARRVFDLMGCRNVVSWTSIIVAHAQNAQGHEALEM 216
GF +L + L +MY KC V+ AR+VFD M R++VSW +I+ ++QN ALEM
Sbjct: 164 SGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEM 223
Query: 217 FREFNYQSRDRPNQHMLASVINACASLGRLVSGKVAHGVVVRSGCEFNDVVASALVDMYA 276
+ ++ +P+ + SV+ A ++L + GK HG +RSG + +++ALVDMYA
Sbjct: 224 VKSMCEENL-KPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYA 282
Query: 277 KCGSVNYSDKVFNRISNPSVVTYTSMIVGAAKYGLGRFSLDLFNEMISRGIKPNDVTFVG 336
KCGS+ + ++F+ + +VV++ SMI + + ++ +F +M+ G+KP DV+ +G
Sbjct: 283 KCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMG 342
Query: 337 VLHACSHSGLVDEG 350
LHAC+ G ++ G
Sbjct: 343 ALHACADLGDLERG 356
Score = 50.1 bits (118), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 89/202 (44%), Gaps = 7/202 (3%)
Query: 230 QHMLASVINACASLGRLVSGKVAHGVVVRSGCEFNDVVASALVDMYAKCGSVNYSDKVFN 289
+H A ++ C+SL L + +V ++G + LV ++ + GSV+ + +VF
Sbjct: 37 EHPAALLLERCSSLKEL---RQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFE 93
Query: 290 RISNPSVVTYTSMIVGAAKYGLGRFSLDLFNEMISRGIKPNDVTFVGVLHACSHSGLVDE 349
I + V Y +M+ G AK +L F M ++P F +L C +
Sbjct: 94 PIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRV 153
Query: 350 GIQHLDSMYRKYGIIPDAKHYTCVVDMLGRTGRLDEAYKLAKSIQVDPDGGPLLWGTLLS 409
G + + + K G D T + +M + +++EA K+ + P+ + W T+++
Sbjct: 154 G-KEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRM---PERDLVSWNTIVA 209
Query: 410 ASRLHGRVDIAVEASNQLIESN 431
+G +A+E + E N
Sbjct: 210 GYSQNGMARMALEMVKSMCEEN 231
>sp|O23169|PP353_ARATH Pentatricopeptide repeat-containing protein At4g37170
OS=Arabidopsis thaliana GN=PCMP-H5 PE=3 SV=1
Length = 691
Score = 420 bits (1080), Expect = e-116, Method: Compositional matrix adjust.
Identities = 220/575 (38%), Positives = 337/575 (58%), Gaps = 11/575 (1%)
Query: 33 FIQQLQECKHLISLASVHSEILKSGFLSNTFTLNHLINCYVRLKKTQVARQLFDEMLEPN 92
++ +C L+ V E+ S N ++N Y + + AR+LFDEM E +
Sbjct: 126 LLRMYAKCGSLVDARKVFDEMPNRDLCS----WNVMVNGYAEVGLLEEARKLFDEMTEKD 181
Query: 93 VVSYTSLMAGYINMGQPQIALLLFQKM--LGNLVWPNEFTFATVIKACSMLADLITGKQI 150
S+T+++ GY+ QP+ AL+L+ M + N PN FT + + A + + + GK+I
Sbjct: 182 SYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSR-PNIFTVSIAVAAAAAVKCIRRGKEI 240
Query: 151 HTHIETFGFQYNLVVCSSLVDMYGKCNDVDGARRVFDLMGCRNVVSWTSIIVAHAQNAQG 210
H HI G + V+ SSL+DMYGKC +D AR +FD + ++VVSWTS+I + ++++
Sbjct: 241 HGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRW 300
Query: 211 HEALEMFREFNYQSRDRPNQHMLASVINACASLGRLVSGKVAHGVVVRSGCEFNDVVASA 270
E +F E S +RPN++ A V+NACA L GK HG + R G + +S+
Sbjct: 301 REGFSLFSEL-VGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSS 359
Query: 271 LVDMYAKCGSVNYSDKVFNRISNPSVVTYTSMIVGAAKYGLGRFSLDLFNEMISRGIKPN 330
LVDMY KCG++ + V + P +V++TS+I G A+ G +L F+ ++ G KP+
Sbjct: 360 LVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPD 419
Query: 331 DVTFVGVLHACSHSGLVDEGIQHLDSMYRKYGIIPDAKHYTCVVDMLGRTGRLDEAYKLA 390
VTFV VL AC+H+GLV++G++ S+ K+ + + HYTC+VD+L R+GR ++ +
Sbjct: 420 HVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVI 479
Query: 391 KSIQVDPDGGPLLWGTLLSASRLHGRVDIAVEASNQLIESNQQVANAYVTLSNTYALAGE 450
+ + P LW ++L +G +D+A EA+ +L + + YVT++N YA AG+
Sbjct: 480 SEMPMKP--SKFLWASVLGGCSTYGNIDLAEEAAQELFKIEPENPVTYVTMANIYAAAGK 537
Query: 451 WENVHSLRSEMKRTGIHKEPGCSWVEIRDQTYAFYAGNALFERGSEVLSLLRELERKMKE 510
WE +R M+ G+ K PG SW EI+ + + F A + ++++ LREL +KMKE
Sbjct: 538 WEEEGKMRKRMQEIGVTKRPGSSWTEIKRKRHVFIAADTSHPMYNQIVEFLRELRKKMKE 597
Query: 511 RGYVGGKTGLVFVDVEDEAREEIVGLHSERLALAFGLISIPKGITIRIMKNLRMCRDCHD 570
GYV T LV DVEDE +EE + HSE+LA+AF ++S +G I++ KNLR C DCH
Sbjct: 598 EGYVPA-TSLVLHDVEDEQKEENLVYHSEKLAVAFAILSTEEGTAIKVFKNLRSCVDCHG 656
Query: 571 VFKLISDIVERDFVVRDVNRFHHFRNGSCSCGDFW 605
K IS+I +R VRD RFH F NG CSCGD+W
Sbjct: 657 AIKFISNITKRKITVRDSTRFHCFENGQCSCGDYW 691
Score = 149 bits (375), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 117/411 (28%), Positives = 190/411 (46%), Gaps = 70/411 (17%)
Query: 118 KMLGNLVWPNEFTFATVIKACSMLADLITGKQIHTHIETFGFQYNLVVCSSLVDMYGKCN 177
++LG P T+ +I+ CS L GK++H HI T GF +V+ + L+ MY KC
Sbjct: 75 QLLGRAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCG 134
Query: 178 DVDGARRVFDLMGCRNVVSWTSIIVAHAQNAQGHEALEMFREFN-------------YQS 224
+ AR+VFD M R++ SW ++ +A+ EA ++F E Y
Sbjct: 135 SLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVK 194
Query: 225 RDRPNQ-----HMLASVINACASLGR-------------LVSGKVAHGVVVRSGCEFNDV 266
+D+P + ++ V N+ ++ + GK HG +VR+G + ++V
Sbjct: 195 KDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEV 254
Query: 267 VASALVDMYAKCGSVNYSDKVFNRISNPSVVTYTSMIVGAAKYGLGRFSLDLFNEMISRG 326
+ S+L+DMY KCG ++ + +F++I VV++TSMI K R LF+E++
Sbjct: 255 LWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSC 314
Query: 327 IKPNDVTFVGVLHACSHSGLVDEGIQ------------------HLDSMYRKYGIIPDAK 368
+PN+ TF GVL+AC+ + G Q L MY K G I AK
Sbjct: 315 ERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAK 374
Query: 369 H------------YTCVVDMLGRTGRLDEAYK----LAKSIQVDPDGGPLLWGTLLSASR 412
H +T ++ + G+ DEA K L KS PD + +LSA
Sbjct: 375 HVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKS-GTKPDHVTFV--NVLSACT 431
Query: 413 LHGRVDIAVEASNQLIESNQ--QVANAYVTLSNTYALAGEWENVHSLRSEM 461
G V+ +E + E ++ ++ Y L + A +G +E + S+ SEM
Sbjct: 432 HAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEM 482
>sp|Q9SY02|PP301_ARATH Pentatricopeptide repeat-containing protein At4g02750
OS=Arabidopsis thaliana GN=PCMP-H24 PE=3 SV=1
Length = 781
Score = 416 bits (1068), Expect = e-115, Method: Compositional matrix adjust.
Identities = 207/547 (37%), Positives = 332/547 (60%), Gaps = 16/547 (2%)
Query: 61 NTFTLNHLINCYVRLKKTQVARQLFDEMLEPNVVSYTSLMAGYINMGQPQIALLLFQKML 120
+ + N +I Y + K ARQLFDE +V ++T++++GYI + A LF KM
Sbjct: 249 DVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMP 308
Query: 121 GNLVWPNEFTFATVIKACSMLADLITGKQIHTHIETFGFQ--YNLVVCSSLVDMYGKCND 178
NE ++ +MLA + G+++ E F N+ ++++ Y +C
Sbjct: 309 ER----NEVSWN------AMLAGYVQGERMEMAKELFDVMPCRNVSTWNTMITGYAQCGK 358
Query: 179 VDGARRVFDLMGCRNVVSWTSIIVAHAQNAQGHEALEMFREFNYQSRDRPNQHMLASVIN 238
+ A+ +FD M R+ VSW ++I ++Q+ EAL +F + + R N+ +S ++
Sbjct: 359 ISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREG-GRLNRSSFSSALS 417
Query: 239 ACASLGRLVSGKVAHGVVVRSGCEFNDVVASALVDMYAKCGSVNYSDKVFNRISNPSVVT 298
CA + L GK HG +V+ G E V +AL+ MY KCGS+ ++ +F ++ +V+
Sbjct: 418 TCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVS 477
Query: 299 YTSMIVGAAKYGLGRFSLDLFNEMISRGIKPNDVTFVGVLHACSHSGLVDEGIQHLDSMY 358
+ +MI G +++G G +L F M G+KP+D T V VL ACSH+GLVD+G Q+ +M
Sbjct: 478 WNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMT 537
Query: 359 RKYGIIPDAKHYTCVVDMLGRTGRLDEAYKLAKSIQVDPDGGPLLWGTLLSASRLHGRVD 418
+ YG++P+++HY C+VD+LGR G L++A+ L K++ +PD +WGTLL ASR+HG +
Sbjct: 538 QDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAA--IWGTLLGASRVHGNTE 595
Query: 419 IAVEASNQLIESNQQVANAYVTLSNTYALAGEWENVHSLRSEMKRTGIHKEPGCSWVEIR 478
+A A++++ + + YV LSN YA +G W +V LR M+ G+ K PG SW+EI+
Sbjct: 596 LAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQ 655
Query: 479 DQTYAFYAGNALFERGSEVLSLLRELERKMKERGYVGGKTGLVFVDVEDEAREEIVGLHS 538
++T+ F G+ E+ + L EL+ +MK+ GYV KT +V DVE+E +E +V HS
Sbjct: 656 NKTHTFSVGDEFHPEKDEIFAFLEELDLRMKKAGYV-SKTSVVLHDVEEEEKERMVRYHS 714
Query: 539 ERLALAFGLISIPKGITIRIMKNLRMCRDCHDVFKLISDIVERDFVVRDVNRFHHFRNGS 598
ERLA+A+G++ + G IR++KNLR+C DCH+ K ++ I R ++RD NRFHHF++GS
Sbjct: 715 ERLAVAYGIMRVSSGRPIRVIKNLRVCEDCHNAIKYMARITGRLIILRDNNRFHHFKDGS 774
Query: 599 CSCGDFW 605
CSCGD+W
Sbjct: 775 CSCGDYW 781
Score = 85.1 bits (209), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 88/391 (22%), Positives = 173/391 (44%), Gaps = 41/391 (10%)
Query: 25 SSCHTKAHFIQQLQECKHLISLASVHSEILKSGFLSNTFTLNHLINCYVRLKKTQVARQL 84
++ H A+F L+ S +LK G S+ N I+ Y+R + A ++
Sbjct: 29 NNAHGAANF-HSLKRATQTQIQKSQTKPLLKCG-DSDIKEWNVAISSYMRTGRCNEALRV 86
Query: 85 FDEMLEPNVVSYTSLMAGYINMGQPQIALLLFQKMLGNLVWPNEFTFATVIKACSMLADL 144
F M + VSY +++GY+ G+ ++A LF +M P ++ M+
Sbjct: 87 FKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEM------PER----DLVSWNVMIKGY 136
Query: 145 ITGKQIHTHIETFGFQYNLVVCS--SLVDMYGKCNDVDGARRVFDLMGCRNVVSWTSIIV 202
+ + + E F VCS +++ Y + VD AR VFD M +N VSW +++
Sbjct: 137 VRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLS 196
Query: 203 AHAQNAQGHEALEMFREFNYQSRDRPNQHMLASVINACASLGRLVSGKVAHGVVVRSGCE 262
A+ QN++ EA +F+ SR+ A V C G + K+
Sbjct: 197 AYVQNSKMEEACMLFK-----SREN-----WALVSWNCLLGGFVKKKKIVEARQFFDSMN 246
Query: 263 FNDVVA-SALVDMYAKCGSVNYSDKVFNRISNPSVVTYTSMIVGAAKYGLGRFSLDLFNE 321
DVV+ + ++ YA+ G ++ + ++F+ V T+T+M+ G + + + +LF++
Sbjct: 247 VRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDK 306
Query: 322 MISRGIKPNDVTFVGVLHACSHSGLVDEGIQHLDSMYRKYGIIP--DAKHYTCVVDMLGR 379
M R N+V++ +L +G V + ++ + ++P + + ++ +
Sbjct: 307 MPER----NEVSWNAML-----AGYVQG--ERMEMAKELFDVMPCRNVSTWNTMITGYAQ 355
Query: 380 TGRLDEAYKLAKSIQVDPDGGPLLWGTLLSA 410
G++ EA L + P P+ W +++
Sbjct: 356 CGKISEAKNLFDKM---PKRDPVSWAAMIAG 383
Score = 69.7 bits (169), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 80/165 (48%), Gaps = 4/165 (2%)
Query: 29 TKAHFIQQLQECKHLISL---ASVHSEILKSGFLSNTFTLNHLINCYVRLKKTQVARQLF 85
++ F L C +++L +H ++K G+ + F N L+ Y + + A LF
Sbjct: 408 NRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLF 467
Query: 86 DEMLEPNVVSYTSLMAGYINMGQPQIALLLFQKMLGNLVWPNEFTFATVIKACSMLADLI 145
EM ++VS+ +++AGY G ++AL F+ M + P++ T V+ ACS +
Sbjct: 468 KEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVD 527
Query: 146 TGKQ-IHTHIETFGFQYNLVVCSSLVDMYGKCNDVDGARRVFDLM 189
G+Q +T + +G N + +VD+ G+ ++ A + M
Sbjct: 528 KGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNM 572
>sp|Q9FFG8|PP417_ARATH Pentatricopeptide repeat-containing protein At5g44230
OS=Arabidopsis thaliana GN=PCMP-H17 PE=2 SV=1
Length = 657
Score = 413 bits (1061), Expect = e-114, Method: Compositional matrix adjust.
Identities = 235/613 (38%), Positives = 346/613 (56%), Gaps = 47/613 (7%)
Query: 33 FIQQLQECKHLISLASVHSEILKSGFLSNTFTLNHLINCYVRL--KKTQVARQLFDEMLE 90
I +L +C +L + +H +L+ G + + L LI +L AR++ + +
Sbjct: 52 LISKLDDCINLNQIKQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYARRVIEPVQF 111
Query: 91 PNVVSYTSLMAGYINMGQPQIALLLFQKMLGNLVWPNEFTFATVIKACSMLADLITGKQI 150
N +T+++ GY G+ A+ ++ M + P FTF+ ++KAC + DL G+Q
Sbjct: 112 RNPFLWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNLGRQF 171
Query: 151 HTH---IETFGFQYNLVVCSSLVDMYGKCNDVDGARRVFDLMGCRNVVSWTSIIVAHA-- 205
H + F F Y V ++++DMY KC +D AR+VFD M R+V+SWT +I A+A
Sbjct: 172 HAQTFRLRGFCFVY---VGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARV 228
Query: 206 -----------------------------QNAQGHEALEMFREFNYQSRDRPNQHMLASV 236
QNA+ EALE F +S R ++ +A
Sbjct: 229 GNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRME-KSGIRADEVTVAGY 287
Query: 237 INACASLGRLVSGKVAHGVVVRSGCEFND--VVASALVDMYAKCGSVNYSDKVFNRISNP 294
I+ACA LG A + +SG +D V+ SAL+DMY+KCG+V + VF ++N
Sbjct: 288 ISACAQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNK 347
Query: 295 SVVTYTSMIVGAAKYGLGRFSLDLFNEMISRG-IKPNDVTFVGVLHACSHSGLVDEGIQH 353
+V TY+SMI+G A +G + +L LF+ M+++ IKPN VTFVG L ACSHSGLVD+G Q
Sbjct: 348 NVFTYSSMILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQV 407
Query: 354 LDSMYRKYGIIPDAKHYTCVVDMLGRTGRLDEAYKLAKSIQVDPDGGPLLWGTLLSASRL 413
DSMY+ +G+ P HYTC+VD+LGRTGRL EA +L K++ V+P GG +WG LL A R+
Sbjct: 408 FDSMYQTFGVQPTRDHYTCMVDLLGRTGRLQEALELIKTMSVEPHGG--VWGALLGACRI 465
Query: 414 HGRVDIAVEASNQLIESNQQVANAYVTLSNTYALAGEWENVHSLRSEMKRTGIHKEPGCS 473
H +IA A+ L E + Y+ LSN YA AG+W V +R +K G+ K P S
Sbjct: 466 HNNPEIAEIAAEHLFELEPDIIGNYILLSNVYASAGDWGGVLRVRKLIKEKGLKKTPAVS 525
Query: 474 WVEIRD-QTYAFYAGNALFERGSEVLSLLRELERKMKERGYVGGKTGLVFVDVEDEAREE 532
WV ++ Q + F+ GN +++ L EL ++ GY + + + DV D A+
Sbjct: 526 WVVDKNGQMHKFFPGNLNHPMSNKIQDKLEELVERLTVLGYQPDLSSVPY-DVSDNAKRL 584
Query: 533 IVGLHSERLALAFGLISIPKGITIRIMKNLRMCRDCHDVFKLISDIVERDFVVRDVNRFH 592
I+ H+E+LALAF L++ + TI IMKNLRMC DCH +L S++ + ++RD RFH
Sbjct: 585 ILIQHTEKLALAFSLLTTNRDSTITIMKNLRMCLDCHKFMRLASEVTGKVIIMRDNMRFH 644
Query: 593 HFRNGSCSCGDFW 605
HFR+G CSCGDFW
Sbjct: 645 HFRSGDCSCGDFW 657
>sp|O81767|PP348_ARATH Pentatricopeptide repeat-containing protein At4g33990
OS=Arabidopsis thaliana GN=EMB2758 PE=3 SV=2
Length = 823
Score = 412 bits (1058), Expect = e-114, Method: Compositional matrix adjust.
Identities = 222/559 (39%), Positives = 318/559 (56%), Gaps = 4/559 (0%)
Query: 48 SVHSEILKSGFLSNTFTLNHLINCYVRLKKTQVARQLFDEMLEPNVVSYTSLMAGYINMG 107
++HS +K G S F N LI+ Y + + +++FD M +++S+ S++ Y
Sbjct: 268 TIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNE 327
Query: 108 QPQIALLLFQKMLGNLVWPNEFTFATVIKACSMLADLITGKQIHTHIETFG-FQYNLVVC 166
QP A+ LFQ+M + + P+ T ++ S L D+ + + G F ++ +
Sbjct: 328 QPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIG 387
Query: 167 SSLVDMYGKCNDVDGARRVFDLMGCRNVVSWTSIIVAHAQNAQGHEALEMFREFNYQSRD 226
+++V MY K VD AR VF+ + +V+SW +II +AQN EA+EM+ +
Sbjct: 388 NAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEI 447
Query: 227 RPNQHMLASVINACASLGRLVSGKVAHGVVVRSGCEFNDVVASALVDMYAKCGSVNYSDK 286
NQ SV+ AC+ G L G HG ++++G + V ++L DMY KCG + +
Sbjct: 448 AANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALS 507
Query: 287 VFNRISNPSVVTYTSMIVGAAKYGLGRFSLDLFNEMISRGIKPNDVTFVGVLHACSHSGL 346
+F +I + V + ++I +G G ++ LF EM+ G+KP+ +TFV +L ACSHSGL
Sbjct: 508 LFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGL 567
Query: 347 VDEGIQHLDSMYRKYGIIPDAKHYTCVVDMLGRTGRLDEAYKLAKSIQVDPDGGPLLWGT 406
VDEG + M YGI P KHY C+VDM GR G+L+ A K KS+ + PD +WG
Sbjct: 568 VDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDAS--IWGA 625
Query: 407 LLSASRLHGRVDIAVEASNQLIESNQQVANAYVTLSNTYALAGEWENVHSLRSEMKRTGI 466
LLSA R+HG VD+ AS L E + +V LSN YA AG+WE V +RS G+
Sbjct: 626 LLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGL 685
Query: 467 HKEPGCSWVEIRDQTYAFYAGNALFERGSEVLSLLRELERKMKERGYVGGKTGLVFVDVE 526
K PG S +E+ ++ FY GN E+ L L+ K+K GYV V DVE
Sbjct: 686 RKTPGWSSMEVDNKVEVFYTGNQTHPMYEEMYRELTALQAKLKMIGYVPDHR-FVLQDVE 744
Query: 527 DEAREEIVGLHSERLALAFGLISIPKGITIRIMKNLRMCRDCHDVFKLISDIVERDFVVR 586
D+ +E I+ HSERLA+AF LI+ P TIRI KNLR+C DCH V K IS I ER+ +VR
Sbjct: 745 DDEKEHILMSHSERLAIAFALIATPAKTTIRIFKNLRVCGDCHSVTKFISKITEREIIVR 804
Query: 587 DVNRFHHFRNGSCSCGDFW 605
D NRFHHF+NG CSCGD+W
Sbjct: 805 DSNRFHHFKNGVCSCGDYW 823
Score = 184 bits (468), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 121/399 (30%), Positives = 206/399 (51%), Gaps = 11/399 (2%)
Query: 33 FIQQLQECKHLISLASVHSEILKSGFLSNTFTLNHLINCYVRLKKTQVARQLFDEMLEPN 92
F L+ C+ +I +H LK GF+ + + LI+ Y R K AR LFDEM +
Sbjct: 156 FPSVLKACRTVIDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRD 215
Query: 93 VVSYTSLMAGYINMGQPQIALLLFQKMLGNLVWPNEFTFATVIKACSMLADLITGKQIHT 152
+ S+ ++++GY G + AL L + + T +++ AC+ D G IH+
Sbjct: 216 MGSWNAMISGYCQSGNAKEALTLSNGLRAM----DSVTVVSLLSACTEAGDFNRGVTIHS 271
Query: 153 HIETFGFQYNLVVCSSLVDMYGKCNDVDGARRVFDLMGCRNVVSWTSIIVAHAQNAQGHE 212
+ G + L V + L+D+Y + + ++VFD M R+++SW SII A+ N Q
Sbjct: 272 YSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLR 331
Query: 213 ALEMFREFNYQSRDRPNQHMLASVINACASLGRLVSGKVAHGVVVRSGCEFNDV-VASAL 271
A+ +F+E SR +P+ L S+ + + LG + + + G +R G D+ + +A+
Sbjct: 332 AISLFQEMRL-SRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAV 390
Query: 272 VDMYAKCGSVNYSDKVFNRISNPSVVTYTSMIVGAAKYGLGRFSLDLFNEMISRG-IKPN 330
V MYAK G V+ + VFN + N V+++ ++I G A+ G +++++N M G I N
Sbjct: 391 VVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAAN 450
Query: 331 DVTFVGVLHACSHSGLVDEGIQHLDSMYRKYGIIPDAKHYTCVVDMLGRTGRLDEAYKLA 390
T+V VL ACS +G + +G++ L K G+ D T + DM G+ GRL++A L
Sbjct: 451 QGTWVSVLPACSQAGALRQGMK-LHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLF 509
Query: 391 KSIQVDPDGGPLLWGTLLSASRLHGRVDIAVEASNQLIE 429
I P + W TL++ HG + AV ++++
Sbjct: 510 YQI---PRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLD 545
Score = 137 bits (346), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 107/431 (24%), Positives = 194/431 (45%), Gaps = 14/431 (3%)
Query: 40 CKHLISLASVHSEILKSGFLSNTFTLNHLINCYVRLKKTQVARQLFDEMLEPNVVSYTSL 99
C +L S +H+ ++ S + N L+N Y L +AR FD + +V ++ +
Sbjct: 64 CTNLQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLM 123
Query: 100 MAGYINMGQPQIALLLFQK-MLGNLVWPNEFTFATVIKACSMLADLITGKQIHTHIETFG 158
++GY G + F ML + + P+ TF +V+KAC + D G +IH FG
Sbjct: 124 ISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVID---GNKIHCLALKFG 180
Query: 159 FQYNLVVCSSLVDMYGKCNDVDGARRVFDLMGCRNVVSWTSIIVAHAQNAQGHEALEMFR 218
F +++ V +SL+ +Y + V AR +FD M R++ SW ++I + Q+ EAL +
Sbjct: 181 FMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSN 240
Query: 219 EFNYQSRDRPNQHMLASVINACASLGRLVSGKVAHGVVVRSGCEFNDVVASALVDMYAKC 278
+ + S+++AC G G H ++ G E V++ L+D+YA+
Sbjct: 241 GLRAM-----DSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEF 295
Query: 279 GSVNYSDKVFNRISNPSVVTYTSMIVGAAKYGLGRFSLDLFNEMISRGIKPNDVTFVGVL 338
G + KVF+R+ ++++ S+I ++ LF EM I+P+ +T + +
Sbjct: 296 GRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLA 355
Query: 339 HACSHSGLVDEGIQHLDSMYRKYGIIPDAKHYTCVVDMLGRTGRLDEAYKLAKSIQVDPD 398
S G + RK + D VV M + G +D A + + P+
Sbjct: 356 SILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWL---PN 412
Query: 399 GGPLLWGTLLSASRLHGRVDIAVEASNQLIESNQQVAN--AYVTLSNTYALAGEWENVHS 456
+ W T++S +G A+E N + E + AN +V++ + AG
Sbjct: 413 TDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMK 472
Query: 457 LRSEMKRTGIH 467
L + + G++
Sbjct: 473 LHGRLLKNGLY 483
Score = 80.1 bits (196), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 136/288 (47%), Gaps = 24/288 (8%)
Query: 129 FTFATVIKACSML-ADLITGKQIHTHIETFGFQYNLVVCSSLVDMYGKCNDVDGARRVFD 187
F + T +++ L A L+ KQI N+ + + LV++Y +V AR FD
Sbjct: 61 FRYCTNLQSAKCLHARLVVSKQIQ----------NVCISAKLVNLYCYLGNVALARHTFD 110
Query: 188 LMGCRNVVSWTSIIVAHAQNAQGHEALEMFREFNYQSRDRPNQHMLASVINACASLGRLV 247
+ R+V +W +I + + E + F F S P+ SV+ AC + ++
Sbjct: 111 HIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRT---VI 167
Query: 248 SGKVAHGVVVRSGCEFNDVVASALVDMYAKCGSVNYSDKVFNRISNPSVVTYTSMIVGAA 307
G H + ++ G ++ VA++L+ +Y++ +V + +F+ + + ++ +MI G
Sbjct: 168 DGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYC 227
Query: 308 KYGLGRFSLDLFNEMISRGIKPND-VTFVGVLHACSHSGLVDEGIQHLDSMYRKYGIIPD 366
+ G + +L L S G++ D VT V +L AC+ +G + G+ + S K+G+ +
Sbjct: 228 QSGNAKEALTL-----SNGLRAMDSVTVVSLLSACTEAGDFNRGVT-IHSYSIKHGLESE 281
Query: 367 AKHYTCVVDMLGRTGRLDEAYKLAKSIQVDPDGGPLLWGTLLSASRLH 414
++D+ GRL + K+ + V + W +++ A L+
Sbjct: 282 LFVSNKLIDLYAEFGRLRDCQKVFDRMYVRD---LISWNSIIKAYELN 326
>sp|Q8LK93|PP145_ARATH Pentatricopeptide repeat-containing protein At2g02980
OS=Arabidopsis thaliana GN=PCMP-H26 PE=2 SV=2
Length = 603
Score = 412 bits (1058), Expect = e-114, Method: Compositional matrix adjust.
Identities = 216/594 (36%), Positives = 351/594 (59%), Gaps = 8/594 (1%)
Query: 15 ASSLTRQNKRSSCHTKAHFIQQLQECKHLISLASVHSEILKSGFLSNTFTLNHLINCYVR 74
A + T+ +K + +T+ + I + +C L L + + +KS +F + C
Sbjct: 15 AETFTKHSKIDTVNTQ-NPILLISKCNSLRELMQIQAYAIKSHIEDVSFVAKLINFCTES 73
Query: 75 LKKTQV--ARQLFDEMLEPNVVSYTSLMAGYINMGQPQIALLLFQKMLGNLVWPNEFTFA 132
++ + AR LF+ M EP++V + S+ GY P LF ++L + + P+ +TF
Sbjct: 74 PTESSMSYARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFP 133
Query: 133 TVIKACSMLADLITGKQIHTHIETFGFQYNLVVCSSLVDMYGKCNDVDGARRVFDLMGCR 192
+++KAC++ L G+Q+H G N+ VC +L++MY +C DVD AR VFD +
Sbjct: 134 SLLKACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEP 193
Query: 193 NVVSWTSIIVAHAQNAQGHEALEMFREFNYQSRDRPNQHMLASVINACASLGRLVSGKVA 252
VV + ++I +A+ + +EAL +FRE + +PN+ L SV+++CA LG L GK
Sbjct: 194 CVVCYNAMITGYARRNRPNEALSLFREMQGKYL-KPNEITLLSVLSSCALLGSLDLGKWI 252
Query: 253 HGVVVR-SGCEFNDVVASALVDMYAKCGSVNYSDKVFNRISNPSVVTYTSMIVGAAKYGL 311
H + S C++ V +AL+DM+AKCGS++ + +F ++ +++MIV A +G
Sbjct: 253 HKYAKKHSFCKYVKV-NTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGK 311
Query: 312 GRFSLDLFNEMISRGIKPNDVTFVGVLHACSHSGLVDEGIQHLDSMYRKYGIIPDAKHYT 371
S+ +F M S ++P+++TF+G+L+ACSH+G V+EG ++ M K+GI+P KHY
Sbjct: 312 AEKSMLMFERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYG 371
Query: 372 CVVDMLGRTGRLDEAYKLAKSIQVDPDGGPLLWGTLLSASRLHGRVDIAVEASNQLIESN 431
+VD+L R G L++AY+ + + P P+LW LL+A H +D+A + S ++ E +
Sbjct: 372 SMVDLLSRAGNLEDAYEFIDKLPISP--TPMLWRILLAACSSHNNLDLAEKVSERIFELD 429
Query: 432 QQVANAYVTLSNTYALAGEWENVHSLRSEMKRTGIHKEPGCSWVEIRDQTYAFYAGNALF 491
YV LSN YA +WE V SLR MK K PGCS +E+ + + F++G+ +
Sbjct: 430 DSHGGDYVILSNLYARNKKWEYVDSLRKVMKDRKAVKVPGCSSIEVNNVVHEFFSGDGVK 489
Query: 492 ERGSEVLSLLRELERKMKERGYVGGKTGLVFVDVEDEAREEIVGLHSERLALAFGLISIP 551
+++ L E+ +++K GYV + +V ++ D+ +E + HSE+LA+ FGL++ P
Sbjct: 490 SATTKLHRALDEMVKELKLSGYVPDTSMVVHANMNDQEKEITLRYHSEKLAITFGLLNTP 549
Query: 552 KGITIRIMKNLRMCRDCHDVFKLISDIVERDFVVRDVNRFHHFRNGSCSCGDFW 605
G TIR++KNLR+CRDCH+ KLIS I R V+RDV RFHHF +G CSCGDFW
Sbjct: 550 PGTTIRVVKNLRVCRDCHNAAKLISLIFGRKVVLRDVQRFHHFEDGKCSCGDFW 603
>sp|O23266|PP308_ARATH Pentatricopeptide repeat-containing protein At4g14050,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H13 PE=2
SV=3
Length = 612
Score = 412 bits (1058), Expect = e-114, Method: Compositional matrix adjust.
Identities = 219/612 (35%), Positives = 355/612 (58%), Gaps = 42/612 (6%)
Query: 32 HFIQQLQEC---KHLISLASVHSEILKSGFLSNTFTLNHLINCYVRLKKTQVARQLFDEM 88
H++ QLQ C + L + ++H+ I+K G + N L+N Y + A Q+FDEM
Sbjct: 5 HYLHQLQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEM 64
Query: 89 LEPNVVSYTSLMAGY--INMGQPQIALLLFQKMLGNLVWPNEFTFATVIKACSMLADLIT 146
+ +++ S++ N+ +++ L P++F F+ ++KAC+ L +
Sbjct: 65 PHRDHIAWASVLTALNQANLSGKTLSVFSSVGSSSGLR-PDDFVFSALVKACANLGSIDH 123
Query: 147 GKQIHTHIETFGFQYNLVVCSSLVDMYGKCNDVDGARRVFDLMGCRNVVSWTSIIVAHAQ 206
G+Q+H H + + VV SSLVDMY KC ++ A+ VFD + +N +SWT+++ +A+
Sbjct: 124 GRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAK 183
Query: 207 NAQGHEALEMFR-------------------------------EFNYQSRDRPNQHMLAS 235
+ + EALE+FR E + D + +L+S
Sbjct: 184 SGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSS 243
Query: 236 VINACASLGRLVSGKVAHGVVVRSGCEFNDVVASALVDMYAKCGSVNYSDKVFNRISNPS 295
++ ACA+L ++G+ HG+V+ G + +++AL+DMYAKC V + +F+R+ +
Sbjct: 244 IVGACANLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRD 303
Query: 296 VVTYTSMIVGAAKYGLGRFSLDLFNEMISRGIKPNDVTFVGVLHACSHSGLVDEGIQHLD 355
VV++TS+IVG A++G +L L+++M+S G+KPN+VTFVG+++ACSH G V++G +
Sbjct: 304 VVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQ 363
Query: 356 SMYRKYGIIPDAKHYTCVVDMLGRTGRLDEAYKLAKSIQVDPDGGPLLWGTLLSASRLHG 415
SM + YGI P +HYTC++D+LGR+G LDEA L ++ PD W LLSA + G
Sbjct: 364 SMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPT--WAALLSACKRQG 421
Query: 416 RVDIAVEASNQLIESNQ-QVANAYVTLSNTYALAGEWENVHSLRSEMKRTGIHKEPGCSW 474
R + + ++ L+ S + + + Y+ LSN YA A W V R ++ + K+PG S
Sbjct: 422 RGQMGIRIADHLVSSFKLKDPSTYILLSNIYASASLWGKVSEARRKLGEMEVRKDPGHSS 481
Query: 475 VEIRDQTYAFYAGNALFERGSEVLSLLRELERKMKER-GYVGGKTGLVFVDVEDEAREEI 533
VE+R +T FYAG ++ LL++LE +M+ R GYV T + D++++ +E++
Sbjct: 482 VEVRKETEVFYAGETSHPLKEDIFRLLKKLEEEMRIRNGYV-PDTSWILHDMDEQEKEKL 540
Query: 534 VGLHSERLALAFGLISIPKGITIRIMKNLRMCRDCHDVFKLISDIVERDFVVRDVNRFHH 593
+ HSER A+A+GL+ G IRI+KNLR+C DCH V K IS+I ER+ +VRD R+HH
Sbjct: 541 LFWHSERSAVAYGLLKAVPGTPIRIVKNLRVCGDCHVVLKHISEITEREIIVRDATRYHH 600
Query: 594 FRNGSCSCGDFW 605
F+ G CSC DFW
Sbjct: 601 FKGGKCSCNDFW 612
>sp|Q9SN39|PP320_ARATH Pentatricopeptide repeat-containing protein At4g18750,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H45 PE=2
SV=1
Length = 871
Score = 411 bits (1056), Expect = e-114, Method: Compositional matrix adjust.
Identities = 211/564 (37%), Positives = 337/564 (59%), Gaps = 4/564 (0%)
Query: 43 LISLA-SVHSEILKSGFLSNTFTLNHLINCYVRLKKTQVARQLFDEMLEPNVVSYTSLMA 101
LISL +VHS +K+ F N L++ Y + A+ +F EM + +VVSYTS++A
Sbjct: 311 LISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIA 370
Query: 102 GYINMGQPQIALLLFQKMLGNLVWPNEFTFATVIKACSMLADLITGKQIHTHIETFGFQY 161
GY G A+ LF++M + P+ +T V+ C+ L GK++H I+ +
Sbjct: 371 GYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGF 430
Query: 162 NLVVCSSLVDMYGKCNDVDGARRVFDLMGCRNVVSWTSIIVAHAQNAQGHEALEMFREFN 221
++ V ++L+DMY KC + A VF M ++++SW +II +++N +EAL +F
Sbjct: 431 DIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLL 490
Query: 222 YQSRDRPNQHMLASVINACASLGRLVSGKVAHGVVVRSGCEFNDVVASALVDMYAKCGSV 281
+ R P++ +A V+ ACASL G+ HG ++R+G + VA++LVDMYAKCG++
Sbjct: 491 EEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGAL 550
Query: 282 NYSDKVFNRISNPSVVTYTSMIVGAAKYGLGRFSLDLFNEMISRGIKPNDVTFVGVLHAC 341
+ +F+ I++ +V++T MI G +G G+ ++ LFN+M GI+ ++++FV +L+AC
Sbjct: 551 LLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYAC 610
Query: 342 SHSGLVDEGIQHLDSMYRKYGIIPDAKHYTCVVDMLGRTGRLDEAYKLAKSIQVDPDGGP 401
SHSGLVDEG + + M + I P +HY C+VDML RTG L +AY+ +++ + PD
Sbjct: 611 SHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDA-- 668
Query: 402 LLWGTLLSASRLHGRVDIAVEASNQLIESNQQVANAYVTLSNTYALAGEWENVHSLRSEM 461
+WG LL R+H V +A + + ++ E + YV ++N YA A +WE V LR +
Sbjct: 669 TIWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRI 728
Query: 462 KRTGIHKEPGCSWVEIRDQTYAFYAGNALFERGSEVLSLLRELERKMKERGYVGGKTGLV 521
+ G+ K PGCSW+EI+ + F AG++ + + LR++ +M E GY T
Sbjct: 729 GQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPETENIEAFLRKVRARMIEEGY-SPLTKYA 787
Query: 522 FVDVEDEAREEIVGLHSERLALAFGLISIPKGITIRIMKNLRMCRDCHDVFKLISDIVER 581
+D E+ +EE + HSE+LA+A G+IS G IR+ KNLR+C DCH++ K +S + R
Sbjct: 788 LIDAEEMEKEEALCGHSEKLAMALGIISSGHGKIIRVTKNLRVCGDCHEMAKFMSKLTRR 847
Query: 582 DFVVRDVNRFHHFRNGSCSCGDFW 605
+ V+RD NRFH F++G CSC FW
Sbjct: 848 EIVLRDSNRFHQFKDGHCSCRGFW 871
Score = 157 bits (396), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 120/405 (29%), Positives = 197/405 (48%), Gaps = 7/405 (1%)
Query: 29 TKAHFIQQLQECKHLISLASVHSEILKSGFLSNTFTLNHLINCYVRLKKTQVARQLFDEM 88
T +Q + K L V + I +GF+ ++ + L Y + A ++FDE+
Sbjct: 96 TLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEV 155
Query: 89 LEPNVVSYTSLMAGYINMGQPQIALLLFQKMLGNLVWPNEFTFATVIKACSMLADLITGK 148
+ + LM G ++ LF+KM+ + V + +TF+ V K+ S L + G+
Sbjct: 156 KIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGE 215
Query: 149 QIHTHIETFGFQYNLVVCSSLVDMYGKCNDVDGARRVFDLMGCRNVVSWTSIIVAHAQNA 208
Q+H I GF V +SLV Y K VD AR+VFD M R+V+SW SII + N
Sbjct: 216 QLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNG 275
Query: 209 QGHEALEMFREFNYQSRDRPNQHMLASVINACASLGRLVS-GKVAHGVVVRSGCEFNDVV 267
+ L +F + S + + SV CA RL+S G+ H + V++ D
Sbjct: 276 LAEKGLSVFVQM-LVSGIEIDLATIVSVFAGCAD-SRLISLGRAVHSIGVKACFSREDRF 333
Query: 268 ASALVDMYAKCGSVNYSDKVFNRISNPSVVTYTSMIVGAAKYGLGRFSLDLFNEMISRGI 327
+ L+DMY+KCG ++ + VF +S+ SVV+YTSMI G A+ GL ++ LF EM GI
Sbjct: 334 CNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGI 393
Query: 328 KPNDVTFVGVLHACSHSGLVDEGIQHLDSMYRKYGIIPDAKHYTCVVDMLGRTGRLDEAY 387
P+ T VL+ C+ L+DEG + + ++ + D ++DM + G + EA
Sbjct: 394 SPDVYTVTAVLNCCARYRLLDEG-KRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAE 452
Query: 388 KLAKSIQVDPDGGPLLWGTLLSASRLHGRVDIAVEASNQLIESNQ 432
+ ++V + W T++ + + A+ N L+E +
Sbjct: 453 LVFSEMRVKD---IISWNTIIGGYSKNCYANEALSLFNLLLEEKR 494
>sp|Q9LSL8|PP446_ARATH Pentatricopeptide repeat-containing protein At5g65570
OS=Arabidopsis thaliana GN=PCMP-H47 PE=2 SV=1
Length = 738
Score = 409 bits (1050), Expect = e-113, Method: Compositional matrix adjust.
Identities = 222/548 (40%), Positives = 333/548 (60%), Gaps = 8/548 (1%)
Query: 59 LSNTFTLNHLINCYVRLKKTQVARQLFDEMLEPNVVSYTSLMAGYINMGQPQIALLLFQK 118
+SN F + L++ YV+ KT+ A+ + D + E +VV T+L+ GY G+ A+ FQ
Sbjct: 198 VSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGYSQKGEDTEAVKAFQS 257
Query: 119 MLGNLVWPNEFTFATVIKACSMLADLITGKQIHTHIETFGFQYNLVVCSSLVDMYGKCND 178
ML V PNE+T+A+V+ +C L D+ GK IH + GF+ L +SL+ MY +C+
Sbjct: 258 MLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESALASQTSLLTMYLRCSL 317
Query: 179 VDGARRVFDLMGCRNVVSWTSIIVAHAQNAQGHEALEMFREFNYQSRDRPNQHMLASVIN 238
VD + RVF + N VSWTS+I QN + AL FR+ S +PN L+S +
Sbjct: 318 VDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALIEFRKMMRDSI-KPNSFTLSSALR 376
Query: 239 ACASLGRLVSGKVAHGVVVRSGCEFNDVVASALVDMYAKCGSVNYSDKVFNRISNPSVVT 298
C++L G+ HG+V + G + + S L+D+Y KCG + + VF+ +S V++
Sbjct: 377 GCSNLAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCGCSDMARLVFDTLSEVDVIS 436
Query: 299 YTSMIVGAAKYGLGRFSLDLFNEMISRGIKPNDVTFVGVLHACSHSGLVDEGIQHLDSMY 358
+MI A+ G GR +LDLF MI+ G++PNDVT + VL AC++S LV+EG + DS +
Sbjct: 437 LNTMIYSYAQNGFGREALDLFERMINLGLQPNDVTVLSVLLACNNSRLVEEGCELFDS-F 495
Query: 359 RKYGIIPDAKHYTCVVDMLGRTGRLDEAYKLAKSIQVDPDGGPLLWGTLLSASRLHGRVD 418
RK I+ HY C+VD+LGR GRL+EA L + ++PD +LW TLLSA ++H +V+
Sbjct: 496 RKDKIMLTNDHYACMVDLLGRAGRLEEAEMLTTEV-INPD--LVLWRTLLSACKVHRKVE 552
Query: 419 IAVEASNQLIESNQQVANAYVTLSNTYALAGEWENVHSLRSEMKRTGIHKEPGCSWVEIR 478
+A + +++E + +SN YA G+W V ++S+MK + K P SWVEI
Sbjct: 553 MAERITRKILEIEPGDEGTLILMSNLYASTGKWNRVIEMKSKMKDMKLKKNPAMSWVEIN 612
Query: 479 DQTYAFYAGNALFERGSE-VLSLLRELERKMKERGYVGGKTGLVFVDVEDEAREEIVGLH 537
+T+ F AG+ SE +L L EL +K K+ GYV K+ VF D+E+ A+E + H
Sbjct: 613 KETHTFMAGDLFSHPNSEQILENLEELIKKSKDLGYVEDKS-CVFQDMEETAKERSLHQH 671
Query: 538 SERLALAFGLISIPKGITIRIMKNLRMCRDCHDVFKLISDIVERDFVVRDVNRFHHFRNG 597
SE+LA+AF + G +IRI+KNLR+C DCH K++S +++R+ + RD RFHHFR+G
Sbjct: 672 SEKLAIAFAVWRNVGG-SIRILKNLRVCVDCHSWIKIVSRVMKREIICRDSKRFHHFRDG 730
Query: 598 SCSCGDFW 605
SCSCGD+W
Sbjct: 731 SCSCGDYW 738
Score = 172 bits (437), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 112/362 (30%), Positives = 202/362 (55%), Gaps = 7/362 (1%)
Query: 29 TKAHFIQQLQEC---KHLISLASVHSEILKSGFLSNTFTLNHLINCYVRLKKTQVARQLF 85
T +F Q L++C + + + ++ + +LKSGF + + + L++ ++ ARQ+F
Sbjct: 64 TTHNFSQLLRQCIDERSISGIKTIQAHMLKSGFPAE-ISGSKLVDASLKCGDIDYARQVF 122
Query: 86 DEMLEPNVVSYTSLMAGYINMGQPQIALLLFQKMLGNLVWPNEFTFATVIKACSMLADLI 145
D M E ++V++ SL+A I + + A+ +++ M+ N V P+E+T ++V KA S L+
Sbjct: 123 DGMSERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITNNVLPDEYTLSSVFKAFSDLSLEK 182
Query: 146 TGKQIHTHIETFGFQY-NLVVCSSLVDMYGKCNDVDGARRVFDLMGCRNVVSWTSIIVAH 204
++ H G + N+ V S+LVDMY K A+ V D + ++VV T++IV +
Sbjct: 183 EAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGY 242
Query: 205 AQNAQGHEALEMFREFNYQSRDRPNQHMLASVINACASLGRLVSGKVAHGVVVRSGCEFN 264
+Q + EA++ F+ + + +PN++ ASV+ +C +L + +GK+ HG++V+SG E
Sbjct: 243 SQKGEDTEAVKAFQSMLVE-KVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESA 301
Query: 265 DVVASALVDMYAKCGSVNYSDKVFNRISNPSVVTYTSMIVGAAKYGLGRFSLDLFNEMIS 324
++L+ MY +C V+ S +VF I P+ V++TS+I G + G +L F +M+
Sbjct: 302 LASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALIEFRKMMR 361
Query: 325 RGIKPNDVTFVGVLHACSHSGLVDEGIQHLDSMYRKYGIIPDAKHYTCVVDMLGRTGRLD 384
IKPN T L CS+ + +EG Q + + KYG D + ++D+ G+ G D
Sbjct: 362 DSIKPNSFTLSSALRGCSNLAMFEEGRQ-IHGIVTKYGFDRDKYAGSGLIDLYGKCGCSD 420
Query: 385 EA 386
A
Sbjct: 421 MA 422
Score = 135 bits (339), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 81/267 (30%), Positives = 141/267 (52%), Gaps = 25/267 (9%)
Query: 49 VHSEILKSGFLSNTFTLNHLINCYVRLKKTQVARQLFDEMLEPNVVSYTSLMAGYINMGQ 108
+H ++KSGF S + L+ Y+R + ++F + PN VS+TSL++G + G+
Sbjct: 289 IHGLMVKSGFESALASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGR 348
Query: 109 PQIALLLFQKMLGNLVWPNEFTFATVIKACSMLADLITGKQIHTHIETFGFQYNLVVCSS 168
++AL+ F+KM+ + + PN FT ++ ++ CS LA G+QIH + +GF + S
Sbjct: 349 EEMALIEFRKMMRDSIKPNSFTLSSALRGCSNLAMFEEGRQIHGIVTKYGFDRDKYAGSG 408
Query: 169 LVDMYGKCNDVDGARRVFDLMGCRNVVSWTSIIVAHAQNAQGHEALEMF-REFNYQSRDR 227
L+D+YGKC D AR VFD + +V+S ++I ++AQN G EAL++F R N +
Sbjct: 409 LIDLYGKCGCSDMARLVFDTLSEVDVISLNTMIYSYAQNGFGREALDLFERMINLGL--Q 466
Query: 228 PNQHMLASVINACASLGRLVSGKVAHGVVVRSGCEFNDVVA-----------SALVDMYA 276
PN + SV+ AC + +V GCE D + +VD+
Sbjct: 467 PNDVTVLSVLLAC-----------NNSRLVEEGCELFDSFRKDKIMLTNDHYACMVDLLG 515
Query: 277 KCGSVNYSDKVFNRISNPSVVTYTSMI 303
+ G + ++ + + NP +V + +++
Sbjct: 516 RAGRLEEAEMLTTEVINPDLVLWRTLL 542
Score = 122 bits (307), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 86/292 (29%), Positives = 151/292 (51%), Gaps = 7/292 (2%)
Query: 131 FATVIKACSMLADLITGKQIHTHIETFGFQYNLVVCSSLVDMYGKCNDVDGARRVFDLMG 190
F+ +++ C + K I H+ GF + S LVD KC D+D AR+VFD M
Sbjct: 68 FSQLLRQCIDERSISGIKTIQAHMLKSGFPAE-ISGSKLVDASLKCGDIDYARQVFDGMS 126
Query: 191 CRNVVSWTSIIVAHAQNAQGHEALEMFREFNYQSRDRPNQHMLASVINACASLGRLVSGK 250
R++V+W S+I ++ + EA+EM+R + P+++ L+SV A + L +
Sbjct: 127 ERHIVTWNSLIAYLIKHRRSKEAVEMYR-LMITNNVLPDEYTLSSVFKAFSDLSLEKEAQ 185
Query: 251 VAHGVVVRSGCEFNDV-VASALVDMYAKCGSVNYSDKVFNRISNPSVVTYTSMIVGAAKY 309
+HG+ V G E ++V V SALVDMY K G + V +R+ VV T++IVG ++
Sbjct: 186 RSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGYSQK 245
Query: 310 GLGRFSLDLFNEMISRGIKPNDVTFVGVLHACSHSGLVDEGIQHLDSMYRKYGIIPDAKH 369
G ++ F M+ ++PN+ T+ VL +C + + G + + + K G
Sbjct: 246 GEDTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNG-KLIHGLMVKSGFESALAS 304
Query: 370 YTCVVDMLGRTGRLDEAYKLAKSIQVDPDGGPLLWGTLLSASRLHGRVDIAV 421
T ++ M R +D++ ++ K I+ P+ + W +L+S +GR ++A+
Sbjct: 305 QTSLLTMYLRCSLVDDSLRVFKCIEY-PN--QVSWTSLISGLVQNGREEMAL 353
>sp|Q9SZT8|PP354_ARATH Pentatricopeptide repeat-containing protein At4g37380,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H48 PE=3
SV=1
Length = 632
Score = 407 bits (1046), Expect = e-112, Method: Compositional matrix adjust.
Identities = 232/635 (36%), Positives = 361/635 (56%), Gaps = 50/635 (7%)
Query: 13 LAASSLTRQNKRSSCHTKAHFIQQLQECKHLI-------SLASVHSEILKSGFL--SNTF 63
L A+SL QN+ S+ T + ++ LI + +H+ IL+ L
Sbjct: 6 LLATSLP-QNQLSTTATARFRLPPPEKLAVLIDKSQSVDEVLQIHAAILRHNLLLHPRYP 64
Query: 64 TLN-HLINCYVRLKKTQVARQLFDEMLEPNVVSYTSLMAGYINMGQPQIALLLFQKMLGN 122
LN L Y K + + LF + ++P++ +T+ + G A LL+ ++L +
Sbjct: 65 VLNLKLHRAYASHGKIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSS 124
Query: 123 LVWPNEFTFATVIKACSMLADLITGKQIHTHIETFGFQYNLVVCSSLVDMYGKCNDVDGA 182
+ PNEFTF++++K+CS +GK IHTH+ FG + V + LVD+Y K DV A
Sbjct: 125 EINPNEFTFSSLLKSCSTK----SGKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSA 180
Query: 183 RRVFDLMG------------C-------------------RNVVSWTSIIVAHAQNAQGH 211
++VFD M C R++VSW +I +AQ+ +
Sbjct: 181 QKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPN 240
Query: 212 EALEMFREFNYQSRDRPNQHMLASVINACASLGRLVSGKVAHGVVVRSGCEFNDVVASAL 271
+AL +F++ + + +P++ + + ++AC+ +G L +G+ H V S N V + L
Sbjct: 241 DALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGL 300
Query: 272 VDMYAKCGSVNYSDKVFNRISNPSVVTYTSMIVGAAKYGLGRFSLDLFNEMIS-RGIKPN 330
+DMY+KCGS+ + VFN +V + +MI G A +G + +L LFNEM G++P
Sbjct: 301 IDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPT 360
Query: 331 DVTFVGVLHACSHSGLVDEGIQHLDSMYRKYGIIPDAKHYTCVVDMLGRTGRLDEAYKLA 390
D+TF+G L AC+H+GLV+EGI+ +SM ++YGI P +HY C+V +LGR G+L AY+
Sbjct: 361 DITFIGTLQACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETI 420
Query: 391 KSIQVDPDGGPLLWGTLLSASRLHGRVDIAVEASNQLIESNQQVANAYVTLSNTYALAGE 450
K++ +D D +LW ++L + +LHG + E + LI N + + YV LSN YA G+
Sbjct: 421 KNMNMDADS--VLWSSVLGSCKLHGDFVLGKEIAEYLIGLNIKNSGIYVLLSNIYASVGD 478
Query: 451 WENVHSLRSEMKRTGIHKEPGCSWVEIRDQTYAFYAGNALFERGSEVLSLLRELERKMKE 510
+E V +R+ MK GI KEPG S +EI ++ + F AG+ + E+ ++LR++ ++K
Sbjct: 479 YEGVAKVRNLMKEKGIVKEPGISTIEIENKVHEFRAGDREHSKSKEIYTMLRKISERIKS 538
Query: 511 RGYVGGKTGLVFVDVEDEAREEIVGLHSERLALAFGLISIPKGITIRIMKNLRMCRDCHD 570
GYV T V D+E+ +E+ + +HSERLA+A+GLIS G ++I KNLR+C DCH
Sbjct: 539 HGYV-PNTNTVLQDLEETEKEQSLQVHSERLAIAYGLISTKPGSPLKIFKNLRVCSDCHT 597
Query: 571 VFKLISDIVERDFVVRDVNRFHHFRNGSCSCGDFW 605
V KLIS I R V+RD NRFHHF +GSCSCGDFW
Sbjct: 598 VTKLISKITGRKIVMRDRNRFHHFTDGSCSCGDFW 632
>sp|Q7Y211|PP285_ARATH Pentatricopeptide repeat-containing protein At3g57430,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H81 PE=2
SV=2
Length = 890
Score = 404 bits (1037), Expect = e-111, Method: Compositional matrix adjust.
Identities = 215/584 (36%), Positives = 335/584 (57%), Gaps = 17/584 (2%)
Query: 37 LQECKHLISLAS---VHSEILKSGFL-SNTFTLNHLINCYVRLKKTQVARQLFDEMLEPN 92
L C HL L + +H+ LK+G L N+F + L++ Y K+ R++FD M +
Sbjct: 309 LPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRK 368
Query: 93 VVSYTSLMAGYINMGQPQIALLLFQKMLGNL-VWPNEFTFATVIKACSMLADLITGKQIH 151
+ + +++AGY + ALLLF M + + N T A V+ AC + IH
Sbjct: 369 IGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIH 428
Query: 152 THIETFGFQYNLVVCSSLVDMYGKCNDVDGARRVFDLMGCRNVVSWTSIIVAHAQNAQGH 211
+ G + V ++L+DMY + +D A R+F M R++V+W ++I + +
Sbjct: 429 GFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHE 488
Query: 212 EALEMFREFNYQSRD----------RPNQHMLASVINACASLGRLVSGKVAHGVVVRSGC 261
+AL + + R +PN L +++ +CA+L L GK H +++
Sbjct: 489 DALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNL 548
Query: 262 EFNDVVASALVDMYAKCGSVNYSDKVFNRISNPSVVTYTSMIVGAAKYGLGRFSLDLFNE 321
+ V SALVDMYAKCG + S KVF++I +V+T+ +I+ +G G+ ++DL
Sbjct: 549 ATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRM 608
Query: 322 MISRGIKPNDVTFVGVLHACSHSGLVDEGIQHLDSMYRKYGIIPDAKHYTCVVDMLGRTG 381
M+ +G+KPN+VTF+ V ACSHSG+VDEG++ M YG+ P + HY CVVD+LGR G
Sbjct: 609 MMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAG 668
Query: 382 RLDEAYKLAKSIQVDPDGGPLLWGTLLSASRLHGRVDIAVEASNQLIESNQQVANAYVTL 441
R+ EAY+L + D + W +LL ASR+H ++I A+ LI+ VA+ YV L
Sbjct: 669 RIKEAYQLMNMMPRDFNKAG-AWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLL 727
Query: 442 SNTYALAGEWENVHSLRSEMKRTGIHKEPGCSWVEIRDQTYAFYAGNALFERGSEVLSLL 501
+N Y+ AG W+ +R MK G+ KEPGCSW+E D+ + F AG++ + ++ L
Sbjct: 728 ANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYL 787
Query: 502 RELERKMKERGYVGGKTGLVFVDVEDEAREEIVGLHSERLALAFGLISIPKGITIRIMKN 561
L +M++ GYV T V +VE++ +E ++ HSE+LA+AFG+++ G IR+ KN
Sbjct: 788 ETLWERMRKEGYV-PDTSCVLHNVEEDEKEILLCGHSEKLAIAFGILNTSPGTIIRVAKN 846
Query: 562 LRMCRDCHDVFKLISDIVERDFVVRDVNRFHHFRNGSCSCGDFW 605
LR+C DCH K IS IV+R+ ++RDV RFH F+NG+CSCGD+W
Sbjct: 847 LRVCNDCHLATKFISKIVDREIILRDVRRFHRFKNGTCSCGDYW 890
Score = 155 bits (393), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 108/386 (27%), Positives = 193/386 (50%), Gaps = 17/386 (4%)
Query: 49 VHSEILKSGFLSNTFTLNHLINCYVRLKKTQVARQLFDEMLEPNVVSYTSLMAGYINMGQ 108
VH+ L+ G L N+F +N L+ Y +L K ++ L ++V++ ++++ Q
Sbjct: 224 VHAYGLRKGEL-NSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQ 282
Query: 109 PQIALLLFQKMLGNLVWPNEFTFATVIKACSMLADLITGKQIHTH-IETFGFQYNLVVCS 167
AL ++M+ V P+EFT ++V+ ACS L L TGK++H + ++ N V S
Sbjct: 283 LLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGS 342
Query: 168 SLVDMYGKCNDVDGARRVFDLMGCRNVVSWTSIIVAHAQNAQGHEALEMFREFNYQSRDR 227
+LVDMY C V RRVFD M R + W ++I ++QN EAL +F +
Sbjct: 343 ALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLL 402
Query: 228 PNQHMLASVINACASLGRLVSGKVAHGVVVRSGCEFNDVVASALVDMYAKCGSVNYSDKV 287
N +A V+ AC G + HG VV+ G + + V + L+DMY++ G ++ + ++
Sbjct: 403 ANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRI 462
Query: 288 FNRISNPSVVTYTSMIVGAAKYGLGRFSLDLFNEM------ISRG-----IKPNDVTFVG 336
F ++ + +VT+ +MI G +L L ++M +S+G +KPN +T +
Sbjct: 463 FGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMT 522
Query: 337 VLHACSHSGLVDEGIQHLDSMYRKYGIIPDAKHYTCVVDMLGRTGRLDEAYKLAKSIQVD 396
+L +C+ + +G + + + K + D + +VDM + G L + K+ I
Sbjct: 523 ILPSCAALSALAKG-KEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQI--- 578
Query: 397 PDGGPLLWGTLLSASRLHGRVDIAVE 422
P + W ++ A +HG A++
Sbjct: 579 PQKNVITWNVIIMAYGMHGNGQEAID 604
Score = 153 bits (387), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 109/368 (29%), Positives = 191/368 (51%), Gaps = 12/368 (3%)
Query: 49 VHSEILKSGFLSNTFTL-NHLINCYVRLKKTQVARQLFDEMLEPNVVSYTSLMAGYINMG 107
+H+ + K G+ ++ T+ N L+N Y + ++FD + E N VS+ SL++ +
Sbjct: 119 IHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFE 178
Query: 108 QPQIALLLFQKMLGNLVWPNEFTFATVIKACS---MLADLITGKQIHTHIETFGFQYNLV 164
+ ++AL F+ ML V P+ FT +V+ ACS M L+ GKQ+H + G + N
Sbjct: 179 KWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-ELNSF 237
Query: 165 VCSSLVDMYGKCNDVDGARRVFDLMGCRNVVSWTSIIVAHAQNAQGHEALEMFREFNYQS 224
+ ++LV MYGK + ++ + G R++V+W +++ + QN Q EALE RE +
Sbjct: 238 IINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEG 297
Query: 225 RDRPNQHMLASVINACASLGRLVSGKVAHGVVVRSGC-EFNDVVASALVDMYAKCGSVNY 283
+ P++ ++SV+ AC+ L L +GK H +++G + N V SALVDMY C V
Sbjct: 298 VE-PDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLS 356
Query: 284 SDKVFNRISNPSVVTYTSMIVGAAKYGLGRFSLDLFNEM-ISRGIKPNDVTFVGVLHACS 342
+VF+ + + + + +MI G ++ + +L LF M S G+ N T GV+ AC
Sbjct: 357 GRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACV 416
Query: 343 HSGLVDEGIQHLDSMYRKYGIIPDAKHYTCVVDMLGRTGRLDEAYKLAKSIQVDPDGGPL 402
SG + + K G+ D ++DM R G++D A ++ ++ D +
Sbjct: 417 RSGAFSRK-EAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKME---DRDLV 472
Query: 403 LWGTLLSA 410
W T+++
Sbjct: 473 TWNTMITG 480
Score = 122 bits (306), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 77/243 (31%), Positives = 127/243 (52%), Gaps = 6/243 (2%)
Query: 112 ALLLFQKMLGNLVWPNEFTFATVIKACSMLADLITGKQIHTHIETFGFQYNLV-VCSSLV 170
A+L + M+ + P+ + F ++KA + L D+ GKQIH H+ FG+ + V V ++LV
Sbjct: 81 AVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLV 140
Query: 171 DMYGKCNDVDGARRVFDLMGCRNVVSWTSIIVAHAQNAQGHEALEMFREFNYQSRDRPNQ 230
++Y KC D +VFD + RN VSW S+I + + ALE FR ++ + P+
Sbjct: 141 NLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVE-PSS 199
Query: 231 HMLASVINACASLGR---LVSGKVAHGVVVRSGCEFNDVVASALVDMYAKCGSVNYSDKV 287
L SV+ AC++L L+ GK H +R G E N + + LV MY K G + S +
Sbjct: 200 FTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVL 258
Query: 288 FNRISNPSVVTYTSMIVGAAKYGLGRFSLDLFNEMISRGIKPNDVTFVGVLHACSHSGLV 347
+VT+ +++ + +L+ EM+ G++P++ T VL ACSH ++
Sbjct: 259 LGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEML 318
Query: 348 DEG 350
G
Sbjct: 319 RTG 321
Score = 68.2 bits (165), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 92/190 (48%), Gaps = 13/190 (6%)
Query: 227 RPNQHMLASVINACASLGRLVSGKVAHGVVVRSGCEFNDV-VASALVDMYAKCGSVNYSD 285
+P+ + +++ A A L + GK H V + G + V VA+ LV++Y KCG
Sbjct: 94 KPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVY 153
Query: 286 KVFNRISNPSVVTYTSMIVGAAKYGLGRFSLDLFNEMISRGIKPNDVTFVGVLHACSHSG 345
KVF+RIS + V++ S+I + +L+ F M+ ++P+ T V V+ ACS+
Sbjct: 154 KVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLP 213
Query: 346 LVDEGIQHLDSMYRKYGIIPDAKH---YTCVVDMLGRTGRLDEAYKLAKSIQVDPDGGPL 402
+ EG+ + YG+ + +V M G+ G+L + L S GG
Sbjct: 214 M-PEGLM-MGKQVHAYGLRKGELNSFIINTLVAMYGKLGKLASSKVLLGSF-----GGRD 266
Query: 403 L--WGTLLSA 410
L W T+LS+
Sbjct: 267 LVTWNTVLSS 276
>sp|Q9LFL5|PP390_ARATH Pentatricopeptide repeat-containing protein At5g16860
OS=Arabidopsis thaliana GN=PCMP-H92 PE=2 SV=1
Length = 850
Score = 402 bits (1034), Expect = e-111, Method: Compositional matrix adjust.
Identities = 208/565 (36%), Positives = 345/565 (61%), Gaps = 24/565 (4%)
Query: 59 LSNTFTLNHLINCYVRLKKTQVARQLFDEMLEP----NVVSYTSLMAGYINMGQPQIALL 114
+ + + N ++ Y ++ + + A +LF++M E +VV++++ ++GY G AL
Sbjct: 292 VKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALG 351
Query: 115 LFQKMLGNLVWPNEFTFATVIKACSMLADLITGKQIHTHIETFGFQY--------NLVVC 166
+ ++ML + + PNE T +V+ C+ + L+ GK+IH + + N+V+
Sbjct: 352 VCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVI- 410
Query: 167 SSLVDMYGKCNDVDGARRVFDLMGC--RNVVSWTSIIVAHAQNAQGHEALEMFRE-FNYQ 223
+ L+DMY KC VD AR +FD + R+VV+WT +I ++Q+ ++ALE+ E F
Sbjct: 411 NQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEED 470
Query: 224 SRDRPNQHMLASVINACASLGRLVSGKVAHGVVVRSGCEFNDV---VASALVDMYAKCGS 280
+ RPN ++ + ACASL L GK H +R+ + N V V++ L+DMYAKCGS
Sbjct: 471 CQTRPNAFTISCALVACASLAALRIGKQIHAYALRN--QQNAVPLFVSNCLIDMYAKCGS 528
Query: 281 VNYSDKVFNRISNPSVVTYTSMIVGAAKYGLGRFSLDLFNEMISRGIKPNDVTFVGVLHA 340
++ + VF+ + + VT+TS++ G +G G +L +F+EM G K + VT + VL+A
Sbjct: 529 ISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYA 588
Query: 341 CSHSGLVDEGIQHLDSMYRKYGIIPDAKHYTCVVDMLGRTGRLDEAYKLAKSIQVDPDGG 400
CSHSG++D+G+++ + M +G+ P +HY C+VD+LGR GRL+ A +L + + ++P
Sbjct: 589 CSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPP-- 646
Query: 401 PLLWGTLLSASRLHGRVDIAVEASNQLIESNQQVANAYVTLSNTYALAGEWENVHSLRSE 460
P++W LS R+HG+V++ A+ ++ E +Y LSN YA AG W++V +RS
Sbjct: 647 PVVWVAFLSCCRIHGKVELGEYAAEKITELASNHDGSYTLLSNLYANAGRWKDVTRIRSL 706
Query: 461 MKRTGIHKEPGCSWVEIRDQTYAFYAGNALFERGSEVLSLLRELERKMKERGYVGGKTGL 520
M+ G+ K PGCSWVE T F+ G+ E+ +L + +++K+ GYV +TG
Sbjct: 707 MRHKGVKKRPGCSWVEGIKGTTTFFVGDKTHPHAKEIYQVLLDHMQRIKDIGYV-PETGF 765
Query: 521 VFVDVEDEAREEIVGLHSERLALAFGLISIPKGITIRIMKNLRMCRDCHDVFKLISDIVE 580
DV+DE +++++ HSE+LALA+G+++ P+G IRI KNLR+C DCH F +S I++
Sbjct: 766 ALHDVDDEEKDDLLFEHSEKLALAYGILTTPQGAAIRITKNLRVCGDCHTAFTYMSRIID 825
Query: 581 RDFVVRDVNRFHHFRNGSCSCGDFW 605
D ++RD +RFHHF+NGSCSC +W
Sbjct: 826 HDIILRDSSRFHHFKNGSCSCKGYW 850
Score = 170 bits (430), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 138/484 (28%), Positives = 224/484 (46%), Gaps = 49/484 (10%)
Query: 5 LTRNLIFTLAASSLTRQNKRSSCHTKAHFIQQ--LQECKHLISLASVHSEILKSGFLSNT 62
+ R L+ AA+ + K S T A I + +CK + + +H ++L G L+
Sbjct: 1 MIRRLLIPNAAAKSHQYIKVSLFSTSAPEITPPFIHKCKTISQVKLIHQKLLSFGILTLN 60
Query: 63 FTLNHLINCYVRLKKTQVARQLFDEML--EPNVVSYTSLMAGYINMGQPQIALLLFQKML 120
T +HLI+ Y+ + A L + V + SL+ Y + G L LF ++
Sbjct: 61 LT-SHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLF-GLM 118
Query: 121 GNLVW-PNEFTFATVIKACSMLADLITGKQIHTHIETFGFQYNLVVCSSLVDMYGKCNDV 179
+L W P+ +TF V KAC ++ + G+ H GF N+ V ++LV MY +C +
Sbjct: 119 HSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSL 178
Query: 180 DGARRVFDLMGCRNVVSWTSIIVAHAQNAQGHEALEMFREFNYQSRDRPNQHMLASVINA 239
AR+VFD M +VVSW SII ++A+ + ALEMF + RP+ L +V+
Sbjct: 179 SDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPP 238
Query: 240 CASLGRLVSGKVAHGVVVRSGCEFNDVVASALVDMYAKCGSVNYSDKVFNRISNPSVVTY 299
CASLG GK H V S N V + LVDMYAKCG ++ ++ VF+ +S VV++
Sbjct: 239 CASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSW 298
Query: 300 TSMIV-----------------------------------GAAKYGLGRFSLDLFNEMIS 324
+M+ G A+ GLG +L + +M+S
Sbjct: 299 NAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLS 358
Query: 325 RGIKPNDVTFVGVLHACSHSGLVDEGIQ-HLDSM-----YRKYGIIPDAKHYTCVVDMLG 378
GIKPN+VT + VL C+ G + G + H ++ RK G + ++DM
Sbjct: 359 SGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYA 418
Query: 379 RTGRLDEAYKLAKSIQVDPDGGPLLWGTLLSASRLHGRVDIAVEASNQLIESNQQVANAY 438
+ ++D A + S+ + + W ++ HG + A+E +++ E + Q
Sbjct: 419 KCKKVDTARAMFDSLS-PKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNA 477
Query: 439 VTLS 442
T+S
Sbjct: 478 FTIS 481
Score = 109 bits (273), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 85/289 (29%), Positives = 134/289 (46%), Gaps = 23/289 (7%)
Query: 52 EILKSGFLSNTFTLNHLINCYVRLKKTQVARQLFDEM--LEPNVVSYTSLMAGYINMGQP 109
++ K+G +N LI+ Y + KK AR +FD + E +VV++T ++ GY G
Sbjct: 397 DLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDA 456
Query: 110 QIALLLFQKMLGN--LVWPNEFTFATVIKACSMLADLITGKQIHTH-IETFGFQYNLVVC 166
AL L +M PN FT + + AC+ LA L GKQIH + + L V
Sbjct: 457 NKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVS 516
Query: 167 SSLVDMYGKCNDVDGARRVFDLMGCRNVVSWTSIIVAHAQNAQGHEALEMFREFNYQSRD 226
+ L+DMY KC + AR VFD M +N V+WTS++ + + G EAL +F E
Sbjct: 517 NCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFK 576
Query: 227 RPNQHMLASVINACASLGRLVSG-------KVAHGVVVRSGCEFNDVVASALVDMYAKCG 279
+L V+ AC+ G + G K G V G E + LVD+ + G
Sbjct: 577 LDGVTLLV-VLYACSHSGMIDQGMEYFNRMKTVFG--VSPGPEH----YACLVDLLGRAG 629
Query: 280 SVNYSDKVFNRIS-NPSVVTYTSMIVGAAKYG---LGRFSLDLFNEMIS 324
+N + ++ + P V + + + +G LG ++ + E+ S
Sbjct: 630 RLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEYAAEKITELAS 678
>sp|Q9SHZ8|PP168_ARATH Pentatricopeptide repeat-containing protein At2g22070
OS=Arabidopsis thaliana GN=PCMP-H41 PE=3 SV=1
Length = 786
Score = 400 bits (1027), Expect = e-110, Method: Compositional matrix adjust.
Identities = 210/577 (36%), Positives = 340/577 (58%), Gaps = 39/577 (6%)
Query: 64 TLNHLINCYVRLKKTQVARQLFDEMLEPNVVSYTSLMAGYINMGQPQIALLLFQKML-GN 122
+ N +I ++++ + +A F++M E ++V++ S+++G+ G AL +F KML +
Sbjct: 214 SWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDS 273
Query: 123 LVWPNEFTFATVIKACSMLADLITGKQIHTHIETFGFQYNLVVCSSLVDMYGKCNDVDGA 182
L+ P+ FT A+V+ AC+ L L GKQIH+HI T GF + +V ++L+ MY +C V+ A
Sbjct: 274 LLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETA 333
Query: 183 RRVFDLMGC---------------------------------RNVVSWTSIIVAHAQNAQ 209
RR+ + G R+VV+WT++IV + Q+
Sbjct: 334 RRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGS 393
Query: 210 GHEALEMFREFNYQSRDRPNQHMLASVINACASLGRLVSGKVAHGVVVRSGCEFNDVVAS 269
EA+ +FR RPN + LA++++ +SL L GK HG V+SG ++ V++
Sbjct: 394 YGEAINLFRSM-VGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSN 452
Query: 270 ALVDMYAKCGSVNYSDKVFNRIS-NPSVVTYTSMIVGAAKYGLGRFSLDLFNEMISRGIK 328
AL+ MYAK G++ + + F+ I V++TSMI+ A++G +L+LF M+ G++
Sbjct: 453 ALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLR 512
Query: 329 PNDVTFVGVLHACSHSGLVDEGIQHLDSMYRKYGIIPDAKHYTCVVDMLGRTGRLDEAYK 388
P+ +T+VGV AC+H+GLV++G Q+ D M IIP HY C+VD+ GR G L EA +
Sbjct: 513 PDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQE 572
Query: 389 LAKSIQVDPDGGPLLWGTLLSASRLHGRVDIAVEASNQLIESNQQVANAYVTLSNTYALA 448
+ + ++PD + WG+LLSA R+H +D+ A+ +L+ + + AY L+N Y+
Sbjct: 573 FIEKMPIEPD--VVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSALANLYSAC 630
Query: 449 GEWENVHSLRSEMKRTGIHKEPGCSWVEIRDQTYAFYAGNALFERGSEVLSLLRELERKM 508
G+WE +R MK + KE G SW+E++ + + F + +E+ ++++ ++
Sbjct: 631 GKWEEAAKIRKSMKDGRVKKEQGFSWIEVKHKVHVFGVEDGTHPEKNEIYMTMKKIWDEI 690
Query: 509 KERGYVGGKTGLVFVDVEDEAREEIVGLHSERLALAFGLISIPKGITIRIMKNLRMCRDC 568
K+ GYV T V D+E+E +E+I+ HSE+LA+AFGLIS P T+RIMKNLR+C DC
Sbjct: 691 KKMGYVP-DTASVLHDLEEEVKEQILRHHSEKLAIAFGLISTPDKTTLRIMKNLRVCNDC 749
Query: 569 HDVFKLISDIVERDFVVRDVNRFHHFRNGSCSCGDFW 605
H K IS +V R+ +VRD RFHHF++G CSC D+W
Sbjct: 750 HTAIKFISKLVGREIIVRDTTRFHHFKDGFCSCRDYW 786
Score = 158 bits (400), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 120/469 (25%), Positives = 209/469 (44%), Gaps = 98/469 (20%)
Query: 49 VHSEILKSGFLSNTFTLNHLINCYVRLKKTQVARQLFDEML------------------- 89
VH ++KSG + + + +N+L+N Y + AR+LFDEM
Sbjct: 36 VHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYSKRGD 95
Query: 90 ------------EPNVVSYTSLMAGYINMGQPQIALLLFQKMLGNLVWPNEFTFATVIKA 137
+ + VS+T+++ GY N+GQ A+ + M+ + P +FT V+ +
Sbjct: 96 MDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLAS 155
Query: 138 CSMLADLITGKQIHTHIETFGFQYNLVVCSSLVDMYGKCNDVDGARRVFDLMGCRNVVSW 197
+ + TGK++H+ I G + N+ V +SL++MY KC D A+ VFD M R++ SW
Sbjct: 156 VAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSW 215
Query: 198 TSIIVAHAQ-----------------------------NAQGHE--ALEMFREFNYQSRD 226
++I H Q N +G++ AL++F + S
Sbjct: 216 NAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLL 275
Query: 227 RPNQHMLASVINACASLGRLVSGKVAHGVVVRSGCEFNDVVASALVDMYAKCGSV----- 281
P++ LASV++ACA+L +L GK H +V +G + + +V +AL+ MY++CG V
Sbjct: 276 SPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARR 335
Query: 282 ----------------------------NYSDKVFNRISNPSVVTYTSMIVGAAKYGLGR 313
N + +F + + VV +T+MIVG ++G
Sbjct: 336 LIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYG 395
Query: 314 FSLDLFNEMISRGIKPNDVTFVGVLHACSHSGLVDEGIQHLDSMYRKYGIIPDAKHYTCV 373
+++LF M+ G +PN T +L S + G Q + K G I +
Sbjct: 396 EAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQ-IHGSAVKSGEIYSVSVSNAL 454
Query: 374 VDMLGRTGRLDEAYKLAKSIQVDPDGGPLLWGTLLSASRLHGRVDIAVE 422
+ M + G + A + I+ + D + W +++ A HG + A+E
Sbjct: 455 ITMYAKAGNITSASRAFDLIRCERD--TVSWTSMIIALAQHGHAEEALE 501
Score = 84.0 bits (206), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 89/427 (20%), Positives = 169/427 (39%), Gaps = 115/427 (26%)
Query: 126 PNEFTFATVIKACSMLAD--------LITGKQIHTHIETFGFQYNLVVCSSLVDMYGKCN 177
P + +T+++ C+ L T + +H + G +++ + ++L+++Y K
Sbjct: 4 PVPLSLSTLLELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTG 63
Query: 178 DVDGARRVFDLMGCRNV-------------------------------VSWTSIIVAHAQ 206
AR++FD M R VSWT++IV +
Sbjct: 64 YALHARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKN 123
Query: 207 NAQGHEALEMFREFNYQSRDRPNQHMLASVINACASLGRLVSGKVAHGVVVRSGCEFNDV 266
Q H+A+ + + + + P Q L +V+ + A+ + +GK H +V+ G N
Sbjct: 124 IGQYHKAIRVMGDMVKEGIE-PTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVS 182
Query: 267 VASALVDMYAKCGSVNYSDKVFNR-------------------------------ISNPS 295
V+++L++MYAKCG + VF+R ++
Sbjct: 183 VSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERD 242
Query: 296 VVTYTSMIVGAAKYGLGRFSLDLFNEMISRG-IKPNDVTFVGVLHACS-----------H 343
+VT+ SMI G + G +LD+F++M+ + P+ T VL AC+ H
Sbjct: 243 IVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIH 302
Query: 344 SGLVDEG-------IQHLDSMYRKYGIIPDAKH--------------YTCVVDMLGRTGR 382
S +V G + L SMY + G + A+ +T ++D + G
Sbjct: 303 SHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGD 362
Query: 383 LDEAYKLAKSIQVDPDGGPLLWGTLLSASRLHGRVDIAVEASNQLIESNQQVANAYVTLS 442
+++A + S++ D + W ++ HG A+ ++ Q+
Sbjct: 363 MNQAKNIFVSLK---DRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQR--------P 411
Query: 443 NTYALAG 449
N+Y LA
Sbjct: 412 NSYTLAA 418
Score = 53.9 bits (128), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 74/158 (46%), Gaps = 3/158 (1%)
Query: 49 VHSEILKSGFLSNTFTLNHLINCYVRLKKTQVARQLFDEM-LEPNVVSYTSLMAGYINMG 107
+H +KSG + + N LI Y + A + FD + E + VS+TS++ G
Sbjct: 435 IHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHG 494
Query: 108 QPQIALLLFQKMLGNLVWPNEFTFATVIKACSMLADLITGKQIHTHIETFG-FQYNLVVC 166
+ AL LF+ ML + P+ T+ V AC+ + G+Q ++ L
Sbjct: 495 HAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHY 554
Query: 167 SSLVDMYGKCNDVDGARRVFDLMGCR-NVVSWTSIIVA 203
+ +VD++G+ + A+ + M +VV+W S++ A
Sbjct: 555 ACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSA 592
>sp|Q9SVP7|PP307_ARATH Pentatricopeptide repeat-containing protein At4g13650 OS=Arabidopsis
thaliana GN=PCMP-H42 PE=2 SV=2
Length = 1064
Score = 399 bits (1024), Expect = e-110, Method: Compositional matrix adjust.
Identities = 197/557 (35%), Positives = 321/557 (57%), Gaps = 4/557 (0%)
Query: 49 VHSEILKSGFLSNTFTLNHLINCYVRLKKTQVARQLFDEMLEPNVVSYTSLMAGYINMGQ 108
+HS+I+K+ F N + + LI+ Y +L K A + +VVS+T+++AGY
Sbjct: 512 IHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNF 571
Query: 109 PQIALLLFQKMLGNLVWPNEFTFATVIKACSMLADLITGKQIHTHIETFGFQYNLVVCSS 168
AL F++ML + +E + AC+ L L G+QIH GF +L ++
Sbjct: 572 DDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNA 631
Query: 169 LVDMYGKCNDVDGARRVFDLMGCRNVVSWTSIIVAHAQNAQGHEALEMFREFNYQSRDRP 228
LV +Y +C ++ + F+ + ++W +++ Q+ EAL +F N + D
Sbjct: 632 LVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDN- 690
Query: 229 NQHMLASVINACASLGRLVSGKVAHGVVVRSGCEFNDVVASALVDMYAKCGSVNYSDKVF 288
N S + A + + GK H V+ ++G + V +AL+ MYAKCGS++ ++K F
Sbjct: 691 NNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQF 750
Query: 289 NRISNPSVVTYTSMIVGAAKYGLGRFSLDLFNEMISRGIKPNDVTFVGVLHACSHSGLVD 348
+S + V++ ++I +K+G G +LD F++MI ++PN VT VGVL ACSH GLVD
Sbjct: 751 LEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVD 810
Query: 349 EGIQHLDSMYRKYGIIPDAKHYTCVVDMLGRTGRLDEAYKLAKSIQVDPDGGPLLWGTLL 408
+GI + +SM +YG+ P +HY CVVDML R G L A + + + + PD L+W TLL
Sbjct: 811 KGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDA--LVWRTLL 868
Query: 409 SASRLHGRVDIAVEASNQLIESNQQVANAYVTLSNTYALAGEWENVHSLRSEMKRTGIHK 468
SA +H ++I A++ L+E + + YV LSN YA++ +W+ R +MK G+ K
Sbjct: 869 SACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKK 928
Query: 469 EPGCSWVEIRDQTYAFYAGNALFERGSEVLSLLRELERKMKERGYVGGKTGLVFVDVEDE 528
EPG SW+E+++ ++FY G+ E+ ++L ++ E GYV L+ +++ E
Sbjct: 929 EPGQSWIEVKNSIHSFYVGDQNHPLADEIHEYFQDLTKRASEIGYVQDCFSLL-NELQHE 987
Query: 529 AREEIVGLHSERLALAFGLISIPKGITIRIMKNLRMCRDCHDVFKLISDIVERDFVVRDV 588
++ I+ +HSE+LA++FGL+S+P + I +MKNLR+C DCH K +S + R+ +VRD
Sbjct: 988 QKDPIIFIHSEKLAISFGLLSLPATVPINVMKNLRVCNDCHAWIKFVSKVSNREIIVRDA 1047
Query: 589 NRFHHFRNGSCSCGDFW 605
RFHHF G+CSC D+W
Sbjct: 1048 YRFHHFEGGACSCKDYW 1064
Score = 182 bits (462), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 121/448 (27%), Positives = 216/448 (48%), Gaps = 15/448 (3%)
Query: 29 TKAHFIQQLQECKHLISLA---SVHSEILKSGFLSNTFTLNHLINCYVRLKKTQVARQLF 85
T F L CK + SL +H +LK GF S+T+ N L++ Y L A +F
Sbjct: 287 TPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIF 346
Query: 86 DEMLEPNVVSYTSLMAGYINMGQPQIALLLFQKMLGNLVWPNEFTFATVIKACSMLADLI 145
M + + V+Y +L+ G G + A+ LF++M + + P+ T A+++ ACS L
Sbjct: 347 SNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLF 406
Query: 146 TGKQIHTHIETFGFQYNLVVCSSLVDMYGKCNDVDGARRVFDLMGCRNVVSWTSIIVAHA 205
G+Q+H + GF N + +L+++Y KC D++ A F NVV W ++VA+
Sbjct: 407 RGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYG 466
Query: 206 QNAQGHEALEMFREFNYQSRDRPNQHMLASVINACASLGRLVSGKVAHGVVVRSGCEFND 265
+ +FR+ + PNQ+ S++ C LG L G+ H ++++ + N
Sbjct: 467 LLDDLRNSFRIFRQMQIE-EIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNA 525
Query: 266 VVASALVDMYAKCGSVNYSDKVFNRISNPSVVTYTSMIVGAAKYGLGRFSLDLFNEMISR 325
V S L+DMYAK G ++ + + R + VV++T+MI G +Y +L F +M+ R
Sbjct: 526 YVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDR 585
Query: 326 GIKPNDVTFVGVLHACSHSGLVDEGIQHLDSMYRKYGIIPDAKHYTCVVDMLGRTGRLDE 385
GI+ ++V + AC+ + EG Q + + G D +V + R G+++E
Sbjct: 586 GIRSDEVGLTNAVSACAGLQALKEG-QQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEE 644
Query: 386 AYKLAKSIQVDPDGGPLLWGTLLSASRLHGRVDIA----VEASNQLIESNQQVANAYVTL 441
+Y + + G + W L+S + G + A V + + I++N + V
Sbjct: 645 SYLAFEQTEA---GDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKA 701
Query: 442 SNTYALAGEWENVHSLRSEMKRTGIHKE 469
++ A + + VH++ + +TG E
Sbjct: 702 ASETANMKQGKQVHAV---ITKTGYDSE 726
Score = 157 bits (396), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 107/393 (27%), Positives = 188/393 (47%), Gaps = 7/393 (1%)
Query: 49 VHSEILKSGFLSNTFTLNHLINCYVRLKKTQVARQLFDEMLEPNVVSYTSLMAGYINMGQ 108
+H+ K GF SN L+N Y + + A F E NVV + ++ Y +
Sbjct: 411 LHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDD 470
Query: 109 PQIALLLFQKMLGNLVWPNEFTFATVIKACSMLADLITGKQIHTHIETFGFQYNLVVCSS 168
+ + +F++M + PN++T+ +++K C L DL G+QIH+ I FQ N VCS
Sbjct: 471 LRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSV 530
Query: 169 LVDMYGKCNDVDGARRVFDLMGCRNVVSWTSIIVAHAQNAQGHEALEMFREFNYQSRDRP 228
L+DMY K +D A + ++VVSWT++I + Q +AL FR+ R
Sbjct: 531 LIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQM-LDRGIRS 589
Query: 229 NQHMLASVINACASLGRLVSGKVAHGVVVRSGCEFNDVVASALVDMYAKCGSVNYSDKVF 288
++ L + ++ACA L L G+ H SG + +ALV +Y++CG + S F
Sbjct: 590 DEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAF 649
Query: 289 NRISNPSVVTYTSMIVGAAKYGLGRFSLDLFNEMISRGIKPNDVTFVGVLHACSHSGLVD 348
+ + + +++ G + G +L +F M GI N+ TF + A S + +
Sbjct: 650 EQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMK 709
Query: 349 EGIQHLDSMYRKYGIIPDAKHYTCVVDMLGRTGRLDEAYKLAKSIQVDPDGGPLLWGTLL 408
+G Q + ++ K G + + ++ M + G + +A K + + + W ++
Sbjct: 710 QGKQ-VHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNE---VSWNAII 765
Query: 409 SASRLHGRVDIAVEASNQLIESNQQVANAYVTL 441
+A HG A+++ +Q+I SN V +VTL
Sbjct: 766 NAYSKHGFGSEALDSFDQMIHSN--VRPNHVTL 796
Score = 152 bits (383), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 105/365 (28%), Positives = 187/365 (51%), Gaps = 10/365 (2%)
Query: 49 VHSEILKSGFLSNTFTLNHLINCYVRLKKTQVARQLFDEMLEPNVVSYTSLMAGYINMGQ 108
+HS+ILK G SN L + Y+ A ++FDEM E + ++ ++ +
Sbjct: 107 LHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFTWNKMIKELASRNL 166
Query: 109 PQIALLLFQKMLGNLVWPNEFTFATVIKAC---SMLADLITGKQIHTHIETFGFQYNLVV 165
LF +M+ V PNE TF+ V++AC S+ D++ +QIH I G + + VV
Sbjct: 167 IGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVV--EQIHARILYQGLRDSTVV 224
Query: 166 CSSLVDMYGKCNDVDGARRVFDLMGCRNVVSWTSIIVAHAQNAQGHEALEMFREFNYQSR 225
C+ L+D+Y + VD ARRVFD + ++ SW ++I ++N EA+ +F + Y
Sbjct: 225 CNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDM-YVLG 283
Query: 226 DRPNQHMLASVINACASLGRLVSGKVAHGVVVRSGCEFNDVVASALVDMYAKCGSVNYSD 285
P + +SV++AC + L G+ HG+V++ G + V +ALV +Y G++ ++
Sbjct: 284 IMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAE 343
Query: 286 KVFNRISNPSVVTYTSMIVGAAKYGLGRFSLDLFNEMISRGIKPNDVTFVGVLHACSHSG 345
+F+ +S VTY ++I G ++ G G +++LF M G++P+ T ++ ACS G
Sbjct: 344 HIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADG 403
Query: 346 LVDEGIQHLDSMYRKYGIIPDAKHYTCVVDMLGRTGRLDEAYKLAKSIQVDPDGGPLLWG 405
+ G Q L + K G + K ++++ + ++ A +V+ +LW
Sbjct: 404 TLFRG-QQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVE---NVVLWN 459
Query: 406 TLLSA 410
+L A
Sbjct: 460 VMLVA 464
Score = 146 bits (368), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 98/382 (25%), Positives = 185/382 (48%), Gaps = 7/382 (1%)
Query: 49 VHSEILKSGFLSNTFTLNHLINCYVRLKKTQVARQLFDEMLEPNVVSYTSLMAGYINMGQ 108
+H+ IL G +T N LI+ Y R +AR++FD + + S+ ++++G
Sbjct: 209 IHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNEC 268
Query: 109 PQIALLLFQKMLGNLVWPNEFTFATVIKACSMLADLITGKQIHTHIETFGFQYNLVVCSS 168
A+ LF M + P + F++V+ AC + L G+Q+H + GF + VC++
Sbjct: 269 EAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNA 328
Query: 169 LVDMYGKCNDVDGARRVFDLMGCRNVVSWTSIIVAHAQNAQGHEALEMFREFNYQSRDRP 228
LV +Y ++ A +F M R+ V++ ++I +Q G +A+E+F+ + + P
Sbjct: 329 LVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLE-P 387
Query: 229 NQHMLASVINACASLGRLVSGKVAHGVVVRSGCEFNDVVASALVDMYAKCGSVNYSDKVF 288
+ + LAS++ AC++ G L G+ H + G N+ + AL+++YAKC + + F
Sbjct: 388 DSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYF 447
Query: 289 NRISNPSVVTYTSMIVGAAKYGLGRFSLDLFNEMISRGIKPNDVTFVGVLHACSHSGLVD 348
+VV + M+V R S +F +M I PN T+ +L C G ++
Sbjct: 448 LETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLE 507
Query: 349 EGIQHLDSMYRKYGIIPDAKHYTCVVDMLGRTGRLDEAYKLAKSIQVDPDGGPLL-WGTL 407
G + + S K +A + ++DM + G+LD A+ I + G ++ W T+
Sbjct: 508 LG-EQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAW----DILIRFAGKDVVSWTTM 562
Query: 408 LSASRLHGRVDIAVEASNQLIE 429
++ + D A+ Q+++
Sbjct: 563 IAGYTQYNFDDKALTTFRQMLD 584
Score = 88.6 bits (218), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 95/376 (25%), Positives = 154/376 (40%), Gaps = 49/376 (13%)
Query: 126 PNEFTFATVIKAC-SMLADLITGKQIHTHIETFGFQYNLVVCSSLVDMYGKCNDVDGARR 184
PN T +++ C L G+++H+ I G N + L D Y D+ GA +
Sbjct: 82 PNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFK 141
Query: 185 VFDLMGCRNVVSWTSIIVAHAQNAQGHEALEMFREFNYQSRDRPNQHMLASVINAC--AS 242
VFD M R + +W +I A E +F ++ PN+ + V+ AC S
Sbjct: 142 VFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENV-TPNEGTFSGVLEACRGGS 200
Query: 243 LGRLVSGKVAHGVVVRSGCEFNDVVASALVDMYAKCGSVNYSDKVFNRISNPSVVTYTSM 302
+ V ++ H ++ G + VV + L+D+Y++ G V+ + +VF+ + ++ +M
Sbjct: 201 VAFDVVEQI-HARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAM 259
Query: 303 IVGAAKYGLGRFSLDLFNEMISRGIKPNDVTFVGVLHACSHSGLVDEGIQ---------- 352
I G +K ++ LF +M GI P F VL AC ++ G Q
Sbjct: 260 ISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGF 319
Query: 353 --------HLDSMYRKYGIIPDAKH------------YTCVVDMLGRTGRLDEAYKLAKS 392
L S+Y G + A+H Y +++ L + G ++A +L K
Sbjct: 320 SSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKR 379
Query: 393 IQVD---PDGGPLLW--------GTLLSASRLHGRVDIAVEASNQLIES---NQQVANAY 438
+ +D PD L GTL +LH ASN IE N A
Sbjct: 380 MHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCAD 439
Query: 439 VTLSNTYALAGEWENV 454
+ + Y L E ENV
Sbjct: 440 IETALDYFLETEVENV 455
Score = 65.9 bits (159), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 78/170 (45%), Gaps = 1/170 (0%)
Query: 227 RPNQHMLASVINAC-ASLGRLVSGKVAHGVVVRSGCEFNDVVASALVDMYAKCGSVNYSD 285
RPN L ++ C + G L G+ H +++ G + N ++ L D Y G + +
Sbjct: 81 RPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAF 140
Query: 286 KVFNRISNPSVVTYTSMIVGAAKYGLGRFSLDLFNEMISRGIKPNDVTFVGVLHACSHSG 345
KVF+ + ++ T+ MI A L LF M+S + PN+ TF GVL AC
Sbjct: 141 KVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGS 200
Query: 346 LVDEGIQHLDSMYRKYGIIPDAKHYTCVVDMLGRTGRLDEAYKLAKSIQV 395
+ + ++ + + G+ ++D+ R G +D A ++ +++
Sbjct: 201 VAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRL 250
>sp|Q9SI53|PP147_ARATH Pentatricopeptide repeat-containing protein At2g03880,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H44 PE=2
SV=1
Length = 630
Score = 398 bits (1022), Expect = e-110, Method: Compositional matrix adjust.
Identities = 215/543 (39%), Positives = 331/543 (60%), Gaps = 9/543 (1%)
Query: 63 FTLNHLINCYVRLKKTQVARQLFDEMLEPNVVSYTSLMAGYINMGQPQIALLLFQKMLGN 122
F +N LIN YV+ A QLFD+M + NV+S+T++++ Y Q AL L ML +
Sbjct: 97 FLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRD 156
Query: 123 LVWPNEFTFATVIKACSMLADLITGKQIHTHIETFGFQYNLVVCSSLVDMYGKCNDVDGA 182
V PN +T+++V+++C+ ++D+ + +H I G + ++ V S+L+D++ K + + A
Sbjct: 157 NVRPNVYTYSSVLRSCNGMSDV---RMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDA 213
Query: 183 RRVFDLMGCRNVVSWTSIIVAHAQNAQGHEALEMFREFNYQSRDRPNQHMLASVINACAS 242
VFD M + + W SII AQN++ ALE+F+ ++ Q L SV+ AC
Sbjct: 214 LSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMK-RAGFIAEQATLTSVLRACTG 272
Query: 243 LGRLVSGKVAHGVVVRSGCEFNDVVASALVDMYAKCGSVNYSDKVFNRISNPSVVTYTSM 302
L L G AH +V+ + ++ +ALVDMY KCGS+ + +VFN++ V+T+++M
Sbjct: 273 LALLELGMQAHVHIVKYDQDL--ILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTM 330
Query: 303 IVGAAKYGLGRFSLDLFNEMISRGIKPNDVTFVGVLHACSHSGLVDEGIQHLDSMYRKYG 362
I G A+ G + +L LF M S G KPN +T VGVL ACSH+GL+++G + SM + YG
Sbjct: 331 ISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYG 390
Query: 363 IIPDAKHYTCVVDMLGRTGRLDEAYKLAKSIQVDPDGGPLLWGTLLSASRLHGRVDIAVE 422
I P +HY C++D+LG+ G+LD+A KL ++ +PD + W TLL A R+ + +A
Sbjct: 391 IDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDA--VTWRTLLGACRVQRNMVLAEY 448
Query: 423 ASNQLIESNQQVANAYVTLSNTYALAGEWENVHSLRSEMKRTGIHKEPGCSWVEIRDQTY 482
A+ ++I + + A Y LSN YA + +W++V +R+ M+ GI KEPGCSW+E+ Q +
Sbjct: 449 AAKKVIALDPEDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIH 508
Query: 483 AFYAGNALFERGSEVLSLLRELERKMKERGYVGGKTGLVFVDVEDEAREEIVGLHSERLA 542
AF G+ + EV L +L ++ GYV +T V D+E E E+ + HSE+LA
Sbjct: 509 AFIIGDNSHPQIVEVSKKLNQLIHRLTGIGYV-PETNFVLQDLEGEQMEDSLRHHSEKLA 567
Query: 543 LAFGLISIPKGITIRIMKNLRMCRDCHDVFKLISDIVERDFVVRDVNRFHHFRNGSCSCG 602
LAFGL+++P IRI KNLR+C DCH KL S + R V+RD R+HHF++G CSCG
Sbjct: 568 LAFGLMTLPIEKVIRIRKNLRICGDCHVFCKLASKLEIRSIVIRDPIRYHHFQDGKCSCG 627
Query: 603 DFW 605
D+W
Sbjct: 628 DYW 630
Score = 131 bits (329), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 88/302 (29%), Positives = 157/302 (51%), Gaps = 27/302 (8%)
Query: 18 LTRQNKRSSCHTKAHFIQQLQECKHLISLASVHSEILKSGFLSNTFTLNHLINCYVRLKK 77
+ R N R + +T + L+ C + + +H I+K G S+ F + LI+ + +L +
Sbjct: 153 MLRDNVRPNVYT---YSSVLRSCNGMSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGE 209
Query: 78 TQVARQLFDEMLEPNVVSYTSLMAGYINMGQPQIALLLFQKMLGNLVWPNEFTFATVIKA 137
+ A +FDEM+ + + + S++ G+ + +AL LF++M + T +V++A
Sbjct: 210 PEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRA 269
Query: 138 CSMLADLITGKQIHTHIETFGFQYNLVVCSSLVDMYGKCNDVDGARRVFDLMGCRNVVSW 197
C+ LA L G Q H HI + +L++ ++LVDMY KC ++ A RVF+ M R+V++W
Sbjct: 270 CTGLALLELGMQAHVHI--VKYDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITW 327
Query: 198 TSIIVAHAQNAQGHEALEMFREFNYQSRDRPNQHMLASVINACASLGRLVSG-------K 250
+++I AQN EAL++F S +PN + V+ AC+ G L G K
Sbjct: 328 STMISGLAQNGYSQEALKLFERMK-SSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMK 386
Query: 251 VAHGV-VVRS--GCEFNDVVASALVDMYAKCGSVNYSDKVFNRIS-NPSVVTYTSMIVGA 306
+G+ VR GC ++D+ K G ++ + K+ N + P VT+ +++ GA
Sbjct: 387 KLYGIDPVREHYGC---------MIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLL-GA 436
Query: 307 AK 308
+
Sbjct: 437 CR 438
Score = 111 bits (277), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 148/293 (50%), Gaps = 12/293 (4%)
Query: 124 VWPNEFTFATVIKACSMLADLITGKQIHTHIETFGFQYNLVVCSSLVDMYGKCNDVDGAR 183
+W + T++ +IK C + G I H+ G + + + + L++MY K N ++ A
Sbjct: 57 LWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDAH 116
Query: 184 RVFDLMGCRNVVSWTSIIVAHAQNAQGHEALEMFREFNYQSRDRPNQHMLASVINACASL 243
++FD M RNV+SWT++I A+++ +ALE+ + RPN + +SV+ +C +
Sbjct: 117 QLFDQMPQRNVISWTTMISAYSKCKIHQKALELL-VLMLRDNVRPNVYTYSSVLRSCNGM 175
Query: 244 GRLVSGKVAHGVVVRSGCEFNDVVASALVDMYAKCGSVNYSDKVFNRISNPSVVTYTSMI 303
+ ++ H +++ G E + V SAL+D++AK G + VF+ + + + S+I
Sbjct: 176 SDV---RMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSII 232
Query: 304 VGAAKYGLGRFSLDLFNEMISRGIKPNDVTFVGVLHACSHSGLVDEGIQ-HLDSMYRKYG 362
G A+ +L+LF M G T VL AC+ L++ G+Q H+ +
Sbjct: 233 GGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVKYDQD 292
Query: 363 IIPDAKHYTCVVDMLGRTGRLDEAYKLAKSIQVDPDGGPLLWGTLLSASRLHG 415
+I + +VDM + G L++A ++ ++ + + W T++S +G
Sbjct: 293 LILN----NALVDMYCKCGSLEDALRVFNQMK---ERDVITWSTMISGLAQNG 338
>sp|Q9LYV3|PP377_ARATH Putative pentatricopeptide repeat-containing protein At5g13230,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H89 PE=3
SV=1
Length = 822
Score = 398 bits (1022), Expect = e-110, Method: Compositional matrix adjust.
Identities = 206/558 (36%), Positives = 333/558 (59%), Gaps = 5/558 (0%)
Query: 49 VHSEILKSGFLSNTFTLNHLINCYVRLKKTQVARQLFDEMLEPNVVSYTSLMAGYINMGQ 108
VH +ILK+ ++ + L+ Y +L A ++F+EM + +VV ++ ++A + G
Sbjct: 269 VHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGF 328
Query: 109 PQIALLLFQKMLGNLVWPNEFTFATVIKACSMLADLITGKQIHTHIETFGFQYNLVVCSS 168
A+ LF +M V PNEFT ++++ C++ G+Q+H + GF ++ V ++
Sbjct: 329 CNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNA 388
Query: 169 LVDMYGKCNDVDGARRVFDLMGCRNVVSWTSIIVAHAQNAQGHEALEMFREFNYQSRDRP 228
L+D+Y KC +D A ++F + +N VSW ++IV + +G +A MFRE +++
Sbjct: 389 LIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFRE-ALRNQVSV 447
Query: 229 NQHMLASVINACASLGRLVSGKVAHGVVVRSGCEFNDVVASALVDMYAKCGSVNYSDKVF 288
+ +S + ACASL + G HG+ +++ V+++L+DMYAKCG + ++ VF
Sbjct: 448 TEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVF 507
Query: 289 NRISNPSVVTYTSMIVGAAKYGLGRFSLDLFNEMISRGIKPNDVTFVGVLHACSHSGLVD 348
N + V ++ ++I G + +GLGR +L + + M R KPN +TF+GVL CS++GL+D
Sbjct: 508 NEMETIDVASWNALISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLID 567
Query: 349 EGIQHLDSMYRKYGIIPDAKHYTCVVDMLGRTGRLDEAYKLAKSIQVDPDGGPLLWGTLL 408
+G + +SM R +GI P +HYTC+V +LGR+G+LD+A KL + I +P ++W +L
Sbjct: 568 QGQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLDKAMKLIEGIPYEP--SVMIWRAML 625
Query: 409 SASRLHGRVDIAVEASNQLIESNQQVANAYVTLSNTYALAGEWENVHSLRSEMKRTGIHK 468
SAS + A ++ ++++ N + YV +SN YA A +W NV S+R MK G+ K
Sbjct: 626 SASMNQNNEEFARRSAEEILKINPKDEATYVLVSNMYAGAKQWANVASIRKSMKEMGVKK 685
Query: 469 EPGCSWVEIRDQTYAFYAGNALFERGSEVLSLLRELERKMKERGYVGGKTGLVFVDVEDE 528
EPG SW+E + + F G + + +L L K GYV + V +D++DE
Sbjct: 686 EPGLSWIEHQGDVHYFSVGLSDHPDMKLINGMLEWLNMKATRAGYVPDRNA-VLLDMDDE 744
Query: 529 AREEIVGLHSERLALAFGLISIPKGIT-IRIMKNLRMCRDCHDVFKLISDIVERDFVVRD 587
+++ + +HSERLALA+GL+ +P I IMKNLR+C DCH K+IS IV+RD V+RD
Sbjct: 745 EKDKRLWVHSERLALAYGLVRMPSSRNRILIMKNLRICSDCHSAMKVISSIVQRDLVIRD 804
Query: 588 VNRFHHFRNGSCSCGDFW 605
+NRFHHF G CSCGD W
Sbjct: 805 MNRFHHFHAGVCSCGDHW 822
Score = 147 bits (370), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 107/401 (26%), Positives = 190/401 (47%), Gaps = 7/401 (1%)
Query: 16 SSLTRQNKRSSCHTKAHFIQQLQECKHLISLASVHSEILKSGFLSNTFTLNHLINCYVRL 75
S L R+ + H F++ +HS I+K G+ SN F LIN Y
Sbjct: 135 SRLHREGHELNPHVFTSFLKLFVSLDKAEICPWLHSPIVKLGYDSNAFVGAALINAYSVC 194
Query: 76 KKTQVARQLFDEMLEPNVVSYTSLMAGYINMGQPQIALLLFQKMLGNLVWPNEFTFATVI 135
AR +F+ +L ++V + +++ Y+ G + +L L M PN +TF T +
Sbjct: 195 GSVDSARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTAL 254
Query: 136 KACSMLADLITGKQIHTHIETFGFQYNLVVCSSLVDMYGKCNDVDGARRVFDLMGCRNVV 195
KA L K +H I + + V L+ +Y + D+ A +VF+ M +VV
Sbjct: 255 KASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVV 314
Query: 196 SWTSIIVAHAQNAQGHEALEMFREFNYQSRDRPNQHMLASVINACASLGRLVS-GKVAHG 254
W+ +I QN +EA+++F ++ PN+ L+S++N CA +G+ G+ HG
Sbjct: 315 PWSFMIARFCQNGFCNEAVDLFIRMR-EAFVVPNEFTLSSILNGCA-IGKCSGLGEQLHG 372
Query: 255 VVVRSGCEFNDVVASALVDMYAKCGSVNYSDKVFNRISNPSVVTYTSMIVGAAKYGLGRF 314
+VV+ G + + V++AL+D+YAKC ++ + K+F +S+ + V++ ++IVG G G
Sbjct: 373 LVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGK 432
Query: 315 SLDLFNEMISRGIKPNDVTFVGVLHACSHSGLVDEGIQHLDSMYRKYGIIPDAKHYTCVV 374
+ +F E + + +VTF L AC+ +D G+Q + + K ++
Sbjct: 433 AFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQ-VHGLAIKTNNAKKVAVSNSLI 491
Query: 375 DMLGRTGRLDEAYKLAKSIQVDPDGGPLLWGTLLSASRLHG 415
DM + G + A + ++ W L+S HG
Sbjct: 492 DMYAKCGDIKFAQSVFNEMETIDVAS---WNALISGYSTHG 529
Score = 134 bits (336), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 95/346 (27%), Positives = 161/346 (46%), Gaps = 6/346 (1%)
Query: 44 ISLASVHSEILKSGFLSNTFTLNHLINCYVRLKKTQVARQLFDEMLEPNVVSYTSLMAGY 103
IS ++H +ILK G + F N L+N YV+ + A LFDEM E N VS+ +L GY
Sbjct: 66 ISAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLFDEMPERNNVSFVTLAQGY 125
Query: 104 INMGQPQIALLLFQKMLGNLVWPNEFTFATVIKACSMLADLITGKQIHTHIETFGFQYNL 163
Q I L G+ + P+ FT + +K L +H+ I G+ N
Sbjct: 126 --ACQDPIGLYSRLHREGHELNPHVFT--SFLKLFVSLDKAEICPWLHSPIVKLGYDSNA 181
Query: 164 VVCSSLVDMYGKCNDVDGARRVFDLMGCRNVVSWTSIIVAHAQNAQGHEALEMFREFNYQ 223
V ++L++ Y C VD AR VF+ + C+++V W I+ + +N ++L++
Sbjct: 182 FVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMA 241
Query: 224 SRDRPNQHMLASVINACASLGRLVSGKVAHGVVVRSGCEFNDVVASALVDMYAKCGSVNY 283
PN + + + A LG K HG ++++ + V L+ +Y + G ++
Sbjct: 242 GF-MPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSD 300
Query: 284 SDKVFNRISNPSVVTYTSMIVGAAKYGLGRFSLDLFNEMISRGIKPNDVTFVGVLHACSH 343
+ KVFN + VV ++ MI + G ++DLF M + PN+ T +L+ C+
Sbjct: 301 AFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAI 360
Query: 344 SGLVDEGIQHLDSMYRKYGIIPDAKHYTCVVDMLGRTGRLDEAYKL 389
G + L + K G D ++D+ + ++D A KL
Sbjct: 361 GKCSGLG-EQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKL 405
Score = 71.6 bits (174), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 75/336 (22%), Positives = 142/336 (42%), Gaps = 21/336 (6%)
Query: 130 TFATVIKACSMLADLITGKQIHTHIETFGFQYNLVVCSSLVDMYGKCNDVDGARRVFDLM 189
+ +++ C D I+ K IH I G +L + L++ Y K A +FD M
Sbjct: 51 AYGAMLRRCIQKNDPISAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLFDEM 110
Query: 190 GCRNVVSWTSIIVAHAQNAQGHEALEMFREFNYQSRDRPNQHMLASVINACASLGRLVSG 249
RN VS+ ++ AQ + + ++ + + + N H+ S + SL +
Sbjct: 111 PERNNVSFVTL----AQGYACQDPIGLYSRLHREGHEL-NPHVFTSFLKLFVSLDKAEIC 165
Query: 250 KVAHGVVVRSGCEFNDVVASALVDMYAKCGSVNYSDKVFNRISNPSVVTYTSMIVGAAKY 309
H +V+ G + N V +AL++ Y+ CGSV+ + VF I +V + ++ +
Sbjct: 166 PWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVEN 225
Query: 310 GLGRFSLDLFNEMISRGIKPNDVTFVGVLHACSHSGLVD--EGI--QHLDSMYRKYGIIP 365
G SL L + M G PN+ TF L A G D +G+ Q L + Y +
Sbjct: 226 GYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCY-----VL 280
Query: 366 DAKHYTCVVDMLGRTGRLDEAYKLAKSIQVDPDGGPLLWGTLLSASRLHG----RVDIAV 421
D + ++ + + G + +A+K+ + P + W +++ +G VD+ +
Sbjct: 281 DPRVGVGLLQLYTQLGDMSDAFKVFNEM---PKNDVVPWSFMIARFCQNGFCNEAVDLFI 337
Query: 422 EASNQLIESNQQVANAYVTLSNTYALAGEWENVHSL 457
+ N+ ++ + +G E +H L
Sbjct: 338 RMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGL 373
>sp|Q9LW32|PP258_ARATH Pentatricopeptide repeat-containing protein At3g26782,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H34 PE=2
SV=1
Length = 659
Score = 397 bits (1020), Expect = e-109, Method: Compositional matrix adjust.
Identities = 224/604 (37%), Positives = 355/604 (58%), Gaps = 17/604 (2%)
Query: 13 LAASSLTRQNKRSSCHTKAHFIQQLQECKHLISLAS---VHSEILKSGFLSNTFTLNHLI 69
LA SS+ K S T++ F ++ C L + S H + G+ S+ F + LI
Sbjct: 62 LAFSSM---RKLSLYPTRSSFPCAIKACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALI 118
Query: 70 NCYVRLKKTQVARQLFDEMLEPNVVSYTSLMAGYINMGQPQIALLLFQKML------GNL 123
Y K + AR++FDE+ + N+VS+TS++ GY G A+ LF+ +L +
Sbjct: 119 VMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDA 178
Query: 124 VWPNEFTFATVIKACSMLADLITGKQIHTHIETFGFQYNLVVCSSLVDMYGKCND--VDG 181
++ + +VI ACS + + IH+ + GF + V ++L+D Y K + V
Sbjct: 179 MFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAV 238
Query: 182 ARRVFDLMGCRNVVSWTSIIVAHAQNAQGHEALEMFREFNYQSRDRPNQHMLASVINACA 241
AR++FD + ++ VS+ SI+ +AQ+ +EA E+FR N L++V+ A +
Sbjct: 239 ARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVS 298
Query: 242 SLGRLVSGKVAHGVVVRSGCEFNDVVASALVDMYAKCGSVNYSDKVFNRISNPSVVTYTS 301
G L GK H V+R G E + +V ++++DMY KCG V + K F+R+ N +V ++T+
Sbjct: 299 HSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTA 358
Query: 302 MIVGAAKYGLGRFSLDLFNEMISRGIKPNDVTFVGVLHACSHSGLVDEGIQHLDSMYRKY 361
MI G +G +L+LF MI G++PN +TFV VL ACSH+GL EG + ++M ++
Sbjct: 359 MIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRF 418
Query: 362 GIIPDAKHYTCVVDMLGRTGRLDEAYKLAKSIQVDPDGGPLLWGTLLSASRLHGRVDIAV 421
G+ P +HY C+VD+LGR G L +AY L + +++ PD ++W +LL+A R+H V++A
Sbjct: 419 GVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPD--SIIWSSLLAACRIHKNVELAE 476
Query: 422 EASNQLIESNQQVANAYVTLSNTYALAGEWENVHSLRSEMKRTGIHKEPGCSWVEIRDQT 481
+ +L E + Y+ LS+ YA AG W++V +R MK G+ K PG S +E+ +
Sbjct: 477 ISVARLFELDSSNCGYYMLLSHIYADAGRWKDVERVRMIMKNRGLVKPPGFSLLELNGEV 536
Query: 482 YAFYAGNALFERGSEVLSLLRELERKMKERGYVGGKTGLVFVDVEDEAREEIVGLHSERL 541
+ F G+ + ++ L EL RK+ E GYV T V DV++E +E + +HSE+L
Sbjct: 537 HVFLIGDEEHPQREKIYEFLAELNRKLLEAGYV-SNTSSVCHDVDEEEKEMTLRVHSEKL 595
Query: 542 ALAFGLISIPKGITIRIMKNLRMCRDCHDVFKLISDIVERDFVVRDVNRFHHFRNGSCSC 601
A+AFG+++ G T+ ++KNLR+C DCH+V KLIS IV+R+FVVRD RFHHF++G CSC
Sbjct: 596 AIAFGIMNTVPGSTVNVVKNLRVCSDCHNVIKLISKIVDREFVVRDAKRFHHFKDGGCSC 655
Query: 602 GDFW 605
GD+W
Sbjct: 656 GDYW 659
Score = 154 bits (389), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 111/382 (29%), Positives = 190/382 (49%), Gaps = 15/382 (3%)
Query: 74 RLKKTQVARQLFDEMLEP-NVVSYTSLMAGYINMGQPQIALLLFQKMLGNLVWPNEFTFA 132
R + Q LF+ ++ +V S+ S++A G ALL F M ++P +F
Sbjct: 21 RHTERQNLTTLFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFP 80
Query: 133 TVIKACSMLADLITGKQIHTHIETFGFQYNLVVCSSLVDMYGKCNDVDGARRVFDLMGCR 192
IKACS L D+ +GKQ H FG+Q ++ V S+L+ MY C ++ AR+VFD + R
Sbjct: 81 CAIKACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKR 140
Query: 193 NVVSWTSIIVAHAQNAQGHEALEMFREFNYQSRDRPNQHM-----LASVINACASLGRLV 247
N+VSWTS+I + N +A+ +F++ D + L SVI+AC+ +
Sbjct: 141 NIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKG 200
Query: 248 SGKVAHGVVVRSGCEFNDVVASALVDMYAKCGS--VNYSDKVFNRISNPSVVTYTSMIVG 305
+ H V++ G + V + L+D YAK G V + K+F++I + V+Y S++
Sbjct: 201 LTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSV 260
Query: 306 AAKYGLGRFSLDLFNEMI-SRGIKPNDVTFVGVLHACSHSGLVDEGIQHLDSMYRKYGII 364
A+ G+ + ++F ++ ++ + N +T VL A SHSG + G D + R G+
Sbjct: 261 YAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIR-MGLE 319
Query: 365 PDAKHYTCVVDMLGRTGRLDEAYKLAKSIQVDPDGGPLLWGTLLSASRLHGRVDIAVEAS 424
D T ++DM + GR++ A K ++ + W +++ +HG A+E
Sbjct: 320 DDVIVGTSIIDMYCKCGRVETARKAFDRMK---NKNVRSWTAMIAGYGMHGHAAKALELF 376
Query: 425 NQLIESNQQVANAYVTLSNTYA 446
+I+S V Y+T + A
Sbjct: 377 PAMIDSG--VRPNYITFVSVLA 396
>sp|Q9S7F4|PP206_ARATH Putative pentatricopeptide repeat-containing protein At2g01510
OS=Arabidopsis thaliana GN=PCMP-H36 PE=3 SV=1
Length = 825
Score = 396 bits (1018), Expect = e-109, Method: Compositional matrix adjust.
Identities = 210/558 (37%), Positives = 317/558 (56%), Gaps = 5/558 (0%)
Query: 49 VHSEILKSGFLSNTFTLNHLINCYVRLKKTQVARQLFDEMLEPNVVSYTSLMAGYINMGQ 108
+H+ + +GF + N +++ Y + + R LFDEM E + VSY +++ Y Q
Sbjct: 272 LHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQ 331
Query: 109 PQIALLLFQKMLGNLVWPNEFTFATVIKACSMLADLITGKQIHTHIETFGFQYNLVVCSS 168
+ +L F++M F FAT++ + L+ L G+Q+H L V +S
Sbjct: 332 YEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNS 391
Query: 169 LVDMYGKCNDVDGARRVFDLMGCRNVVSWTSIIVAHAQNAQGHEALEMFREFNYQSRDRP 228
LVDMY KC + A +F + R VSWT++I + Q L++F + S R
Sbjct: 392 LVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMR-GSNLRA 450
Query: 229 NQHMLASVINACASLGRLVSGKVAHGVVVRSGCEFNDVVASALVDMYAKCGSVNYSDKVF 288
+Q A+V+ A AS L+ GK H ++RSG N S LVDMYAKCGS+ + +VF
Sbjct: 451 DQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVF 510
Query: 289 NRISNPSVVTYTSMIVGAAKYGLGRFSLDLFNEMISRGIKPNDVTFVGVLHACSHSGLVD 348
+ + + V++ ++I A G G ++ F +MI G++P+ V+ +GVL ACSH G V+
Sbjct: 511 EEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVE 570
Query: 349 EGIQHLDSMYRKYGIIPDAKHYTCVVDMLGRTGRLDEAYKLAKSIQVDPDGGPLLWGTLL 408
+G ++ +M YGI P KHY C++D+LGR GR EA KL + +PD ++W ++L
Sbjct: 571 QGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPD--EIMWSSVL 628
Query: 409 SASRLHGRVDIAVEASNQLIESNQ-QVANAYVTLSNTYALAGEWENVHSLRSEMKRTGIH 467
+A R+H +A A+ +L + + A AYV++SN YA AGEWE V ++ M+ GI
Sbjct: 629 NACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRERGIK 688
Query: 468 KEPGCSWVEIRDQTYAFYAGNALFERGSEVLSLLRELERKMKERGYVGGKTGLVFVDVED 527
K P SWVE+ + + F + + G E++ + EL +++ GY T V DV++
Sbjct: 689 KVPAYSWVEVNHKIHVFSSNDQTHPNGDEIVRKINELTAEIEREGY-KPDTSSVVQDVDE 747
Query: 528 EAREEIVGLHSERLALAFGLISIPKGITIRIMKNLRMCRDCHDVFKLISDIVERDFVVRD 587
+ + E + HSERLA+AF LIS P+G I +MKNLR CRDCH KLIS IV+R+ VRD
Sbjct: 748 QMKIESLKYHSERLAVAFALISTPEGCPIVVMKNLRACRDCHAAIKLISKIVKREITVRD 807
Query: 588 VNRFHHFRNGSCSCGDFW 605
+RFHHF G CSCGD+W
Sbjct: 808 TSRFHHFSEGVCSCGDYW 825
Score = 159 bits (402), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 124/434 (28%), Positives = 213/434 (49%), Gaps = 12/434 (2%)
Query: 7 RNLIFTLAASSLTRQNKRSSCHTKAH--FIQQLQECKHLI---SLASVHSEILKSGFLSN 61
RN F A + + SSC H F L C + ++ VH+ +K GF +N
Sbjct: 122 RNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTN 181
Query: 62 TFTL--NHLINCYVRLKKTQVARQLFDEMLEPNVVSYTSLMAGYINMGQPQIALLLFQKM 119
F N L+ Y +++ +A LF+E+ E + V++ +L+ GY G ++ LF KM
Sbjct: 182 PFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKM 241
Query: 120 LGNLVWPNEFTFATVIKACSMLADLITGKQIHTHIETFGFQYNLVVCSSLVDMYGKCNDV 179
+ P++FTF+ V+KA L D G+Q+H T GF + V + ++D Y K + V
Sbjct: 242 RQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRV 301
Query: 180 DGARRVFDLMGCRNVVSWTSIIVAHAQNAQGHEALEMFREFNYQSRDRPNQHMLASVINA 239
R +FD M + VS+ +I +++Q Q +L FRE DR N A++++
Sbjct: 302 LETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRN-FPFATMLSI 360
Query: 240 CASLGRLVSGKVAHGVVVRSGCEFNDVVASALVDMYAKCGSVNYSDKVFNRISNPSVVTY 299
A+L L G+ H + + + V ++LVDMYAKC ++ +F + + V++
Sbjct: 361 AANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSW 420
Query: 300 TSMIVGAAKYGLGRFSLDLFNEMISRGIKPNDVTFVGVLHACSHSGLVDEGIQHLDSMYR 359
T++I G + GL L LF +M ++ + TF VL A + + G Q L +
Sbjct: 421 TALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQ-LHAFII 479
Query: 360 KYGIIPDAKHYTCVVDMLGRTGRLDEAYKLAKSIQVDPDGGPLLWGTLLSASRLHGRVDI 419
+ G + + + +VDM + G + +A ++ + + PD + W L+SA +G +
Sbjct: 480 RSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEM---PDRNAVSWNALISAHADNGDGEA 536
Query: 420 AVEASNQLIESNQQ 433
A+ A ++IES Q
Sbjct: 537 AIGAFAKMIESGLQ 550
Score = 95.5 bits (236), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 87/363 (23%), Positives = 158/363 (43%), Gaps = 14/363 (3%)
Query: 61 NTFTLNHLINCYVRLKKTQVARQLFDEMLEPNVVSYTSLMAGYINMGQPQIALLLFQKML 120
NT + N +I+ +V+ AR LFD M + VV++T LM Y A LF++M
Sbjct: 78 NTVSTNTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMC 137
Query: 121 --GNLVWPNEFTFATVIKACSMLADLITGKQIHTHIETFGFQYN--LVVCSSLVDMYGKC 176
+ P+ TF T++ C+ Q+H GF N L V + L+ Y +
Sbjct: 138 RSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEV 197
Query: 177 NDVDGARRVFDLMGCRNVVSWTSIIVAHAQNAQGHEALEMFREFNYQSRDRPNQHMLASV 236
+D A +F+ + ++ V++ ++I + ++ E++ +F + QS +P+ + V
Sbjct: 198 RRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMR-QSGHQPSDFTFSGV 256
Query: 237 INACASLGRLVSGKVAHGVVVRSGCEFNDVVASALVDMYAKCGSVNYSDKVFNRISNPSV 296
+ A L G+ H + V +G + V + ++D Y+K V + +F+ +
Sbjct: 257 LKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDF 316
Query: 297 VTYTSMIVGAAKYGLGRFSLDLFNEMISRGIKPNDVTFVGVLHACSHSGLVDEGIQ-HLD 355
V+Y +I ++ SL F EM G + F +L ++ + G Q H
Sbjct: 317 VSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQ 376
Query: 356 SMYRKYGIIPDAKHYTCVVDMLGRTGRLDEAYKLAKSIQVDPDGGPLLWGTLLSA---SR 412
++ I + +VDM + +EA + KS+ P + W L+S
Sbjct: 377 ALLATADSILHVGN--SLVDMYAKCEMFEEAELIFKSL---PQRTTVSWTALISGYVQKG 431
Query: 413 LHG 415
LHG
Sbjct: 432 LHG 434
Score = 61.2 bits (147), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 100/219 (45%), Gaps = 34/219 (15%)
Query: 22 NKRSSCHTKAHFIQQLQECKHLISLASVHSEILKSGFLSNTFTLNHLINCYVRLKKTQVA 81
N R+ T A ++ L+ +H+ I++SG L N F+ + L++ Y + + A
Sbjct: 447 NLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDA 506
Query: 82 RQLFDEMLEPNVVSYTSLMAGYINMGQPQIALLLFQKMLGNLVWPNEFTFATVIKACSML 141
Q+F+EM + N VS+ +L++ + + G + A+ F KM+ + + P+ + V+ ACS
Sbjct: 507 VQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHC 566
Query: 142 ADLITGKQIHTHIETFGFQYNLVVCSSLVDMYGKCNDVDGARRVFDLMGCRNVVSWTSII 201
+ G + FQ ++ +YG + DL+G
Sbjct: 567 GFVEQGTEY--------FQ-------AMSPIYGITPKKKHYACMLDLLG----------- 600
Query: 202 VAHAQNAQGHEALEMFREFNYQSRDRPNQHMLASVINAC 240
+N + EA ++ E ++ P++ M +SV+NAC
Sbjct: 601 ----RNGRFAEAEKLMDEMPFE----PDEIMWSSVLNAC 631
Score = 35.4 bits (80), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/120 (21%), Positives = 59/120 (49%), Gaps = 5/120 (4%)
Query: 256 VVRSGCEFNDVVASALVDMYAKCGSVNYSDKVFNRISNPSVVTYTSMIVGAAKYGLGRFS 315
++++G + + ++ +V+ + G V+ + KV++ + + + V+ +MI G K G +
Sbjct: 39 IIKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISGHVKTGDVSSA 98
Query: 316 LDLFNEMISRGIKPNDVTFVGVLHACSHSGLVDEGIQHLDSMYRKYG-IIPDAKHYTCVV 374
DLF+ M R + VT+ ++ + + DE + M R +PD +T ++
Sbjct: 99 RDLFDAMPDRTV----VTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLL 154
>sp|Q9FHF9|PP419_ARATH Pentatricopeptide repeat-containing protein At5g46460,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H49 PE=2
SV=1
Length = 697
Score = 396 bits (1017), Expect = e-109, Method: Compositional matrix adjust.
Identities = 221/558 (39%), Positives = 329/558 (58%), Gaps = 27/558 (4%)
Query: 59 LSNTFTLNHLINCYVRLKKTQVARQLFDEMLEPNVVSYTSLMAGYINMGQPQIALLLFQK 118
+ +T N +++ Y++ K A +LF +M NV+S+T+++ G + AL LF+
Sbjct: 156 VKDTAAWNSMVHGYLQFGKVDDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKN 215
Query: 119 MLGNLVWPNEFTFATVIKACSMLADLITGKQIHTHIETFGFQYNLVVCSSLVDMYGKCND 178
ML + F VI AC+ G Q+H I GF Y V +SL+ Y C
Sbjct: 216 MLRCCIKSTSRPFTCVITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKR 275
Query: 179 VDGARRVFDLMGCRNVVSWTSIIVAHAQNAQGHEALEMFREFNYQSRDRPNQHMLASVIN 238
+ +R+VFD V WT+++ ++ N + +AL +F ++ PNQ AS +N
Sbjct: 276 IGDSRKVFDEKVHEQVAVWTALLSGYSLNKKHEDALSIFSGM-LRNSILPNQSTFASGLN 334
Query: 239 ACASLGRLVSGKVAHGVVVRSGCEFNDVVASALVDMYAKCGSVNYSDKVFNRISNPSVVT 298
+C++LG L GK HGV V+ G E + V ++LV MY+ G+VN + VF +I S+V+
Sbjct: 335 SCSALGTLDWGKEMHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVS 394
Query: 299 YTSMIVGAAKYGLGRFSLDLFNEMISRGIKPNDVTFVGVLHACSHSGLVDEG-------- 350
+ S+IVG A++G G+++ +F +MI +P+++TF G+L ACSH G +++G
Sbjct: 395 WNSIIVGCAQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLSACSHCGFLEKGRKLFYYMS 454
Query: 351 --IQHLDSMYRKYGIIPDAKHYTCVVDMLGRTGRLDEAYKLAKSIQVDPDGGPLLWGTLL 408
I H+D RK +HYTC+VD+LGR G+L EA +L + + V P+ ++W LL
Sbjct: 455 SGINHID---RK------IQHYTCMVDILGRCGKLKEAEELIERMVVKPN--EMVWLALL 503
Query: 409 SASRLHGRVDIAVEASNQLIESNQQVANAYVTLSNTYALAGEWENVHSLRSEMKRTGIHK 468
SA R+H VD +A+ + + + + AYV LSN YA AG W NV LR +MK+ GI K
Sbjct: 504 SACRMHSDVDRGEKAAAAIFNLDSKSSAAYVLLSNIYASAGRWSNVSKLRVKMKKNGIMK 563
Query: 469 EPGCSWVEIRDQTYAFYAGNALF-ERGSEVLSLLRELERKMKERGYVGGKTGLVFVDVED 527
+PG SWV IR + + F++G+ R E L LRE K+KE GY + DVED
Sbjct: 564 KPGSSWVVIRGKKHEFFSGDQPHCSRIYEKLEFLRE---KLKELGYAPDYRSALH-DVED 619
Query: 528 EAREEIVGLHSERLALAFGLISIPKGITIRIMKNLRMCRDCHDVFKLISDIVERDFVVRD 587
E +EE++ HSERLA+AFGLI+ +G + +MKNLR+C DCH V KLIS +V R+ V+RD
Sbjct: 620 EQKEEMLWYHSERLAIAFGLINTVEGSAVTVMKNLRVCEDCHTVIKLISGVVGREIVLRD 679
Query: 588 VNRFHHFRNGSCSCGDFW 605
RFHHF+NG+CSCGD+W
Sbjct: 680 PIRFHHFKNGTCSCGDYW 697
Score = 127 bits (318), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 96/369 (26%), Positives = 173/369 (46%), Gaps = 19/369 (5%)
Query: 68 LINCYVRLKKTQVARQLFDEMLEPNVVSYTSLMAGYINMGQPQIALLLFQKMLGNLVWPN 127
+I Y R + A LFDEM +VVS+ S+++G + G A+ LF +M V
Sbjct: 72 MITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVECGDMNTAVKLFDEMPERSV--- 128
Query: 128 EFTFATVIKACSMLADLITGKQIHTHIETFGFQYNLVVCSSLVDMYGKCNDVDGARRVFD 187
++ ++ C + +++ + + +S+V Y + VD A ++F
Sbjct: 129 -VSWTAMVNGCFRSGKVDQAERLFYQMPV----KDTAAWNSMVHGYLQFGKVDDALKLFK 183
Query: 188 LMGCRNVVSWTSIIVAHAQNAQGHEALEMFREF---NYQSRDRPNQHMLASVINACASLG 244
M +NV+SWT++I QN + EAL++F+ +S RP VI ACA+
Sbjct: 184 QMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRP----FTCVITACANAP 239
Query: 245 RLVSGKVAHGVVVRSGCEFNDVVASALVDMYAKCGSVNYSDKVFNRISNPSVVTYTSMIV 304
G HG++++ G + + V+++L+ YA C + S KVF+ + V +T+++
Sbjct: 240 AFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQVAVWTALLS 299
Query: 305 GAAKYGLGRFSLDLFNEMISRGIKPNDVTFVGVLHACSHSGLVDEGIQHLDSMYRKYGII 364
G + +L +F+ M+ I PN TF L++CS G +D G + + + K G+
Sbjct: 300 GYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWG-KEMHGVAVKLGLE 358
Query: 365 PDAKHYTCVVDMLGRTGRLDEAYKLAKSIQVDPDGGPLLWGTLLSASRLHGRVDIAVEAS 424
DA +V M +G +++A + I + W +++ HGR A
Sbjct: 359 TDAFVGNSLVVMYSDSGNVNDAVSVFIKIF---KKSIVSWNSIIVGCAQHGRGKWAFVIF 415
Query: 425 NQLIESNQQ 433
Q+I N++
Sbjct: 416 GQMIRLNKE 424
Score = 120 bits (301), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 94/347 (27%), Positives = 159/347 (45%), Gaps = 47/347 (13%)
Query: 49 VHSEILKSGFLSNTFTLNHLINCYVRLKKTQVARQLFDEMLEPNVVSYTSLMAGYINMGQ 108
VH I+K GFL + LI Y K+ +R++FDE + V +T+L++GY +
Sbjct: 247 VHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQVAVWTALLSGYSLNKK 306
Query: 109 PQIALLLFQKMLGNLVWPNEFTFATVIKACSMLADLITGKQIHTHIETFGFQYNLVVCSS 168
+ AL +F ML N + PN+ TFA+ + +CS L L GK++H G + + V +S
Sbjct: 307 HEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMHGVAVKLGLETDAFVGNS 366
Query: 169 LVDMYGKCNDVDGARRVFDLMGCRNVVSWTSIIVAHAQNAQGHEALEMFREFNYQSRDRP 228
LV MY +V+ A VF + +++VSW SIIV AQ+ +G A +F + +++ P
Sbjct: 367 LVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLNKE-P 425
Query: 229 NQHMLASVINACASLGRLVSGKVAHGVVVRSGCEFNDVVASALVDMYAKCGSVNYSDKVF 288
++ +++AC+ G L G+ Y +N+ D+
Sbjct: 426 DEITFTGLLSACSHCGFLEKGRKL---------------------FYYMSSGINHIDR-- 462
Query: 289 NRISNPSVVTYTSMIVGAAKYGLGRFSLDLFNEMISRGIKPNDVTFVGVLHACSHSGLVD 348
+ YT M+ + G + + +L M+ +KPN++ ++ +L AC VD
Sbjct: 463 ------KIQHYTCMVDILGRCGKLKEAEELIERMV---VKPNEMVWLALLSACRMHSDVD 513
Query: 349 EG------IQHLDSMYRKYGIIPDAKHYTCVVDMLGRTGRLDEAYKL 389
G I +LDS + Y + ++ GR KL
Sbjct: 514 RGEKAAAAIFNLDS--------KSSAAYVLLSNIYASAGRWSNVSKL 552
>sp|Q9FJY7|PP449_ARATH Pentatricopeptide repeat-containing protein At5g66520
OS=Arabidopsis thaliana GN=PCMP-H61 PE=2 SV=1
Length = 620
Score = 396 bits (1017), Expect = e-109, Method: Compositional matrix adjust.
Identities = 212/603 (35%), Positives = 326/603 (54%), Gaps = 37/603 (6%)
Query: 37 LQECKHLISLASVHSEILKSGFLSNTFTLNHLINCYVRLKKTQV---ARQLFDEMLEPNV 93
LQ C L +H+ +LK+G + +++ + ++ + + A+ +FD P+
Sbjct: 21 LQRCSKQEELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDRPDT 80
Query: 94 VSYTSLMAGYINMGQPQIALLLFQKMLGNLVWPNEFTFATVIKACSMLADLITGKQIHTH 153
+ ++ G+ +P+ +LLL+Q+ML + N +TF +++KACS L+ QIH
Sbjct: 81 FLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQ 140
Query: 154 IETFGFQYNLVVCSSLVDMYG-------------------------------KCNDVDGA 182
I G++ ++ +SL++ Y K +D A
Sbjct: 141 ITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIA 200
Query: 183 RRVFDLMGCRNVVSWTSIIVAHAQNAQGHEALEMFREFNYQSRDRPNQHMLASVINACAS 242
+F M +N +SWT++I + Q EAL++F E S P+ LA+ ++ACA
Sbjct: 201 LTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQ-NSDVEPDNVSLANALSACAQ 259
Query: 243 LGRLVSGKVAHGVVVRSGCEFNDVVASALVDMYAKCGSVNYSDKVFNRISNPSVVTYTSM 302
LG L GK H + ++ + V+ L+DMYAKCG + + +VF I SV +T++
Sbjct: 260 LGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTAL 319
Query: 303 IVGAAKYGLGRFSLDLFNEMISRGIKPNDVTFVGVLHACSHSGLVDEGIQHLDSMYRKYG 362
I G A +G GR ++ F EM GIKPN +TF VL ACS++GLV+EG SM R Y
Sbjct: 320 ISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYN 379
Query: 363 IIPDAKHYTCVVDMLGRTGRLDEAYKLAKSIQVDPDGGPLLWGTLLSASRLHGRVDIAVE 422
+ P +HY C+VD+LGR G LDEA + + + + P+ ++WG LL A R+H +++ E
Sbjct: 380 LKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNA--VIWGALLKACRIHKNIELGEE 437
Query: 423 ASNQLIESNQQVANAYVTLSNTYALAGEWENVHSLRSEMKRTGIHKEPGCSWVEIRDQTY 482
LI + YV +N +A+ +W+ R MK G+ K PGCS + + T+
Sbjct: 438 IGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTISLEGTTH 497
Query: 483 AFYAGNALFERGSEVLSLLRELERKMKERGYVGGKTGLVFVDVEDEAREEIVGLHSERLA 542
F AG+ ++ S R + RK++E GYV ++ V+D+ RE IV HSE+LA
Sbjct: 498 EFLAGDRSHPEIEKIQSKWRIMRRKLEENGYVPELEEMLLDLVDDDEREAIVHQHSEKLA 557
Query: 543 LAFGLISIPKGITIRIMKNLRMCRDCHDVFKLISDIVERDFVVRDVNRFHHFRNGSCSCG 602
+ +GLI G IRIMKNLR+C+DCH V KLIS I +RD V+RD RFHHFR+G CSCG
Sbjct: 558 ITYGLIKTKPGTIIRIMKNLRVCKDCHKVTKLISKIYKRDIVMRDRTRFHHFRDGKCSCG 617
Query: 603 DFW 605
D+W
Sbjct: 618 DYW 620
Score = 117 bits (293), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 125/261 (47%), Gaps = 35/261 (13%)
Query: 25 SSCHTKAHFIQQLQECKHLISL---ASVHSEILKSGFLSNTFTLNHLINCYVRLKKTQVA 81
S+ H F L+ C +L + +H++I K G+ ++ + +N LIN Y ++A
Sbjct: 110 SAPHNAYTFPSLLKACSNLSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLA 169
Query: 82 RQLFDEMLEPNVVSYTSLMAGYINMGQPQIALLLFQKMLGN--LVW-------------- 125
LFD + EP+ VS+ S++ GY+ G+ IAL LF+KM + W
Sbjct: 170 HLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNK 229
Query: 126 ---------------PNEFTFATVIKACSMLADLITGKQIHTHIETFGFQYNLVVCSSLV 170
P+ + A + AC+ L L GK IH+++ + + V+ L+
Sbjct: 230 EALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLI 289
Query: 171 DMYGKCNDVDGARRVFDLMGCRNVVSWTSIIVAHAQNAQGHEALEMFREFNYQSRDRPNQ 230
DMY KC +++ A VF + ++V +WT++I +A + G EA+ F E +PN
Sbjct: 290 DMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGI-KPNV 348
Query: 231 HMLASVINACASLGRLVSGKV 251
+V+ AC+ G + GK+
Sbjct: 349 ITFTAVLTACSYTGLVEEGKL 369
>sp|Q9SUH6|PP341_ARATH Pentatricopeptide repeat-containing protein At4g30700
OS=Arabidopsis thaliana GN=DYW9 PE=2 SV=1
Length = 792
Score = 395 bits (1016), Expect = e-109, Method: Compositional matrix adjust.
Identities = 206/557 (36%), Positives = 332/557 (59%), Gaps = 7/557 (1%)
Query: 49 VHSEILKSGFLSNTFTLNHLINCYVRLKKTQVARQLFDEMLEPNVVSYTSLMAGYINMGQ 108
+HS K+G S+ + L I+ Y + K ++ LF E +P++V+Y +++ GY + G+
Sbjct: 243 IHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGE 302
Query: 109 PQIALLLFQKMLGNLVWPNEFTFATVIKACSMLADLITGKQIHTHIETFGFQYNLVVCSS 168
+++L LF++++ + +T++ + L+ IH + F + V ++
Sbjct: 303 TELSLSLFKELM---LSGARLRSSTLVSLVPVSGHLMLIYAIHGYCLKSNFLSHASVSTA 359
Query: 169 LVDMYGKCNDVDGARRVFDLMGCRNVVSWTSIIVAHAQNAQGHEALEMFREFNYQSRDRP 228
L +Y K N+++ AR++FD +++ SW ++I + QN +A+ +FRE +S P
Sbjct: 360 LTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQ-KSEFSP 418
Query: 229 NQHMLASVINACASLGRLVSGKVAHGVVVRSGCEFNDVVASALVDMYAKCGSVNYSDKVF 288
N + +++ACA LG L GK H +V + E + V++AL+ MYAKCGS+ + ++F
Sbjct: 419 NPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLF 478
Query: 289 NRISNPSVVTYTSMIVGAAKYGLGRFSLDLFNEMISRGIKPNDVTFVGVLHACSHSGLVD 348
+ ++ + VT+ +MI G +G G+ +L++F EM++ GI P VTF+ VL+ACSH+GLV
Sbjct: 479 DLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVK 538
Query: 349 EGIQHLDSMYRKYGIIPDAKHYTCVVDMLGRTGRLDEAYKLAKSIQVDPDGGPLLWGTLL 408
EG + +SM +YG P KHY C+VD+LGR G L A + +++ ++P G +W TLL
Sbjct: 539 EGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEP--GSSVWETLL 596
Query: 409 SASRLHGRVDIAVEASNQLIESNQQVANAYVTLSNTYALAGEWENVHSLRSEMKRTGIHK 468
A R+H ++A S +L E + +V LSN ++ + ++R K+ + K
Sbjct: 597 GACRIHKDTNLARTVSEKLFELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAK 656
Query: 469 EPGCSWVEIRDQTYAFYAGNALFERGSEVLSLLRELERKMKERGYVGGKTGLVFVDVEDE 528
PG + +EI + + F +G+ + E+ L +LE KM+E GY +T L DVE+E
Sbjct: 657 APGYTLIEIGETPHVFTSGDQSHPQVKEIYEKLEKLEGKMREAGY-QPETELALHDVEEE 715
Query: 529 AREEIVGLHSERLALAFGLISIPKGITIRIMKNLRMCRDCHDVFKLISDIVERDFVVRDV 588
RE +V +HSERLA+AFGLI+ G IRI+KNLR+C DCH V KLIS I ER VVRD
Sbjct: 716 ERELMVKVHSERLAIAFGLIATEPGTEIRIIKNLRVCLDCHTVTKLISKITERVIVVRDA 775
Query: 589 NRFHHFRNGSCSCGDFW 605
NRFHHF++G CSCGD+W
Sbjct: 776 NRFHHFKDGVCSCGDYW 792
Score = 139 bits (349), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 100/403 (24%), Positives = 177/403 (43%), Gaps = 8/403 (1%)
Query: 29 TKAHFIQQLQECKHLISLASVHSEILKSGFLSNTFTLNHLINCYVRLKKTQVARQLFDEM 88
+K ++ + + LA H++I+ GF ++ L L L AR +F +
Sbjct: 19 SKNTYLDFFKRSTSISHLAQTHAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSV 78
Query: 89 LEPNVVSYTSLMAGYINMGQPQIALLLFQKMLGNL-VWPNEFTFATVIKACSMLADLITG 147
P+V + LM G+ P +L +F + + + PN T+A I A S D G
Sbjct: 79 QRPDVFLFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAG 138
Query: 148 KQIHTHIETFGFQYNLVVCSSLVDMYGKCNDVDGARRVFDLMGCRNVVSWTSIIVAHAQN 207
+ IH G L++ S++V MY K V+ AR+VFD M ++ + W ++I + +N
Sbjct: 139 RVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKN 198
Query: 208 AQGHEALEMFREFNYQSRDRPNQHMLASVINACASLGRLVSGKVAHGVVVRSGCEFNDVV 267
E++++FR+ +S R + L ++ A A L L G H + ++GC +D V
Sbjct: 199 EMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYV 258
Query: 268 ASALVDMYAKCGSVNYSDKVFNRISNPSVVTYTSMIVGAAKYGLGRFSLDLFNEMISRGI 327
+ + +Y+KCG + +F P +V Y +MI G G SL LF E++ G
Sbjct: 259 LTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGA 318
Query: 328 KPNDVTFVGVLHACSHSGLVDEGIQHLDSMYRKYGIIPDAKHYTCVVDMLGRTGRLDEAY 387
+ T V ++ H L I + K + A T + + + ++ A
Sbjct: 319 RLRSSTLVSLVPVSGHLML----IYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESAR 374
Query: 388 KLAKSIQVDPDGGPLLWGTLLSASRLHGRVDIAVEASNQLIES 430
KL P+ W ++S +G + A+ ++ +S
Sbjct: 375 KL---FDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKS 414
Score = 134 bits (337), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 75/239 (31%), Positives = 130/239 (54%), Gaps = 2/239 (0%)
Query: 42 HLISLASVHSEILKSGFLSNTFTLNHLINCYVRLKKTQVARQLFDEMLEPNVVSYTSLMA 101
HL+ + ++H LKS FLS+ L Y +L + + AR+LFDE E ++ S+ ++++
Sbjct: 334 HLMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMIS 393
Query: 102 GYINMGQPQIALLLFQKMLGNLVWPNEFTFATVIKACSMLADLITGKQIHTHIETFGFQY 161
GY G + A+ LF++M + PN T ++ AC+ L L GK +H + + F+
Sbjct: 394 GYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFES 453
Query: 162 NLVVCSSLVDMYGKCNDVDGARRVFDLMGCRNVVSWTSIIVAHAQNAQGHEALEMFREFN 221
++ V ++L+ MY KC + ARR+FDLM +N V+W ++I + + QG EAL +F E
Sbjct: 454 SIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEM- 512
Query: 222 YQSRDRPNQHMLASVINACASLGRLVSG-KVAHGVVVRSGCEFNDVVASALVDMYAKCG 279
S P V+ AC+ G + G ++ + ++ R G E + + +VD+ + G
Sbjct: 513 LNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAG 571
>sp|Q9FG16|PP367_ARATH Pentatricopeptide repeat-containing protein At5g06540
OS=Arabidopsis thaliana GN=PCMP-H88 PE=2 SV=1
Length = 622
Score = 395 bits (1014), Expect = e-109, Method: Compositional matrix adjust.
Identities = 219/608 (36%), Positives = 339/608 (55%), Gaps = 43/608 (7%)
Query: 37 LQECKHLISLASVHSEILKSGFLSNTFTLNHLINCYVR----LKKTQV---ARQLFDEML 89
LQ C L +H +L++ +S+ F + L+ V K T + A +F ++
Sbjct: 19 LQSCSSFSDLKIIHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTNLLGYAYGIFSQIQ 78
Query: 90 EPNVVSYTSLMAGYINMGQPQIALLLFQKMLGNLVWPNEFTFATVIKACSMLADLITGKQ 149
PN+ + L+ + +P A + +ML + +WP+ TF +IKA S + ++ G+Q
Sbjct: 79 NPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMECVLVGEQ 138
Query: 150 IHTHIETFGFQYNLVVCSSLVDMYGKCNDVDGARRVFDLMGCRNVVSWTSIIVAHAQNAQ 209
H+ I FGFQ ++ V +SLV MY C + A R+F MG R+VVSWTS++ + +
Sbjct: 139 THSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYCKCGM 198
Query: 210 GHEALEMFRE----------------------------FNYQSRDR--PNQHMLASVINA 239
A EMF E F + R+ N+ ++ SVI++
Sbjct: 199 VENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVSVISS 258
Query: 240 CASLGRLVSGKVAHGVVVRSGCEFNDVVASALVDMYAKCGSVNYSDKVFNRISNPSVVTY 299
CA LG L G+ A+ VV+S N ++ +ALVDM+ +CG + + VF + +++
Sbjct: 259 CAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPETDSLSW 318
Query: 300 TSMIVGAAKYGLGRFSLDLFNEMISRGIKPNDVTFVGVLHACSHSGLVDEGIQHLDSMYR 359
+S+I G A +G ++ F++MIS G P DVTF VL ACSH GLV++G++ ++M +
Sbjct: 319 SSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEIYENMKK 378
Query: 360 KYGIIPDAKHYTCVVDMLGRTGRLDEAYKLAKSIQVDPDGGPLLWGTLLSASRLHGRVDI 419
+GI P +HY C+VDMLGR G+L EA + V P+ P+L G LL A +++ ++
Sbjct: 379 DHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPN-APIL-GALLGACKIYKNTEV 436
Query: 420 AVEASNQLIESNQQVANAYVTLSNTYALAGEWENVHSLRSEMKRTGIHKEPGCSWVEIRD 479
A N LI+ + + YV LSN YA AG+W+ + SLR MK + K PG S +EI
Sbjct: 437 AERVGNMLIKVKPEHSGYYVLLSNIYACAGQWDKIESLRDMMKEKLVKKPPGWSLIEIDG 496
Query: 480 QTYAFYAGNALFERGSEVLSLLRELERKMKERGYVG--GKTGLVFVDVEDEAREEIVGLH 537
+ F G+ ++ E+ + R+ E + + +G G TG F DV++E +E + +H
Sbjct: 497 KINKFTMGDD--QKHPEMGKIRRKWEEILGKIRLIGYKGNTGDAFFDVDEEEKESSIHMH 554
Query: 538 SERLALAFGLISIPKGITIRIMKNLRMCRDCHDVFKLISDIVERDFVVRDVNRFHHFRNG 597
SE+LA+A+G++ G TIRI+KNLR+C DCH V KLIS++ R+ +VRD NRFHHFRNG
Sbjct: 555 SEKLAIAYGMMKTKPGTTIRIVKNLRVCEDCHTVTKLISEVYGRELIVRDRNRFHHFRNG 614
Query: 598 SCSCGDFW 605
CSC D+W
Sbjct: 615 VCSCRDYW 622
>sp|Q0WSH6|PP312_ARATH Pentatricopeptide repeat-containing protein At4g14850
OS=Arabidopsis thaliana GN=LOI1 PE=1 SV=1
Length = 684
Score = 393 bits (1010), Expect = e-108, Method: Compositional matrix adjust.
Identities = 209/565 (36%), Positives = 328/565 (58%), Gaps = 18/565 (3%)
Query: 49 VHSEILKSGFLSNTFTLNHLINCYVRLKKTQVARQLFDEMLEPNVVSYTSLMAGYINMGQ 108
+H+ +K G + + F + Y + + AR+LFDE+ E N+ ++ + ++ + G+
Sbjct: 130 IHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGR 189
Query: 109 PQIAL---LLFQKMLGNLVWPNEFTFATVIKACSMLADLITGKQIHTHIETFGFQYNLVV 165
P+ A+ + F+++ G+ PN TF + ACS L G Q+H + GF ++ V
Sbjct: 190 PREAIEAFIEFRRIDGH---PNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSV 246
Query: 166 CSSLVDMYGKCNDVDGARRVFDLMGCRNVVSWTSIIVAHAQNAQGHEALEMFREFNYQSR 225
C+ L+D YGKC + + +F MG +N VSW S++ A+ QN + +A ++ +SR
Sbjct: 247 CNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLY----LRSR 302
Query: 226 D---RPNQHMLASVINACASLGRLVSGKVAHGVVVRSGCEFNDVVASALVDMYAKCGSVN 282
+ M++SV++ACA + L G+ H V++ E V SALVDMY KCG +
Sbjct: 303 KDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIE 362
Query: 283 YSDKVFNRISNPSVVTYTSMIVGAAKYGLGRFSLDLFNEMISRGI--KPNDVTFVGVLHA 340
S++ F+ + ++VT S+I G A G +L LF EM RG PN +TFV +L A
Sbjct: 363 DSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSA 422
Query: 341 CSHSGLVDEGIQHLDSMYRKYGIIPDAKHYTCVVDMLGRTGRLDEAYKLAKSIQVDPDGG 400
CS +G V+ G++ DSM YGI P A+HY+C+VDMLGR G ++ AY+ K + + P
Sbjct: 423 CSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTIS 482
Query: 401 PLLWGTLLSASRLHGRVDIAVEASNQLIESNQQVANAYVTLSNTYALAGEWENVHSLRSE 460
+WG L +A R+HG+ + + A+ L + + + + +V LSNT+A AG W +++R E
Sbjct: 483 --VWGALQNACRMHGKPQLGLLAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREE 540
Query: 461 MKRTGIHKEPGCSWVEIRDQTYAFYAGNALFERGSEVLSLLRELERKMKERGYVGGKTGL 520
+K GI K G SW+ +++Q +AF A + E+ + L +L +M+ GY L
Sbjct: 541 LKGVGIKKGAGYSWITVKNQVHAFQAKDRSHILNKEIQTTLAKLRNEMEAAGY-KPDLKL 599
Query: 521 VFVDVEDEAREEIVGLHSERLALAFGLISIPKGITIRIMKNLRMCRDCHDVFKLISDIVE 580
D+E+E + V HSE+LALAFGL+S+P + IRI KNLR+C DCH FK +S V+
Sbjct: 600 SLYDLEEEEKAAEVSHHSEKLALAFGLLSLPLSVPIRITKNLRICGDCHSFFKFVSGSVK 659
Query: 581 RDFVVRDVNRFHHFRNGSCSCGDFW 605
R+ +VRD NRFH F++G CSC D+W
Sbjct: 660 REIIVRDNNRFHRFKDGICSCKDYW 684
Score = 144 bits (362), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 119/428 (27%), Positives = 200/428 (46%), Gaps = 12/428 (2%)
Query: 49 VHSEILKS-GFLSNTFTLNHLINCYVRLKKTQVARQLFDEMLEPNVVSYTSLMAGYINMG 107
VH+ I+K+ F N+LIN Y +L + AR + NVVS+TSL++G G
Sbjct: 28 VHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLTPARNVVSWTSLISGLAQNG 87
Query: 108 QPQIALLLFQKMLGNLVWPNEFTFATVIKACSMLADLITGKQIHTHIETFGFQYNLVVCS 167
AL+ F +M V PN+FTF KA + L +TGKQIH G ++ V
Sbjct: 88 HFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVGC 147
Query: 168 SLVDMYGKCNDVDGARRVFDLMGCRNVVSWTSIIVAHAQNAQGHEALEMFREFNYQSRDR 227
S DMY K D AR++FD + RN+ +W + I + + EA+E F EF +
Sbjct: 148 SAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFR-RIDGH 206
Query: 228 PNQHMLASVINACASLGRLVSGKVAHGVVVRSGCEFNDVVASALVDMYAKCGSVNYSDKV 287
PN + +NAC+ L G HG+V+RSG + + V + L+D Y KC + S+ +
Sbjct: 207 PNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEII 266
Query: 288 FNRISNPSVVTYTSMIVGAAKYGLGRFSLDLFNEMISRGIKPNDVTFVGVLHACSHSGLV 347
F + + V++ S++ + + L+ ++ +D VL AC+ +
Sbjct: 267 FTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGL 326
Query: 348 DEGIQHLDSMYRKYGIIPDAKHYTCVVDMLGRTGRLDEAYKLAKSIQVDPDGGPLLWGTL 407
+ G + + + K + + +VDM G+ G ++++ + + P+ + +L
Sbjct: 327 ELG-RSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEM---PEKNLVTRNSL 382
Query: 408 LSASRLHGRVDIAVEASNQLIESNQQVANAYVT---LSNTYALAGEWENVHSLRSEMKRT 464
+ G+VD+A+ ++ Y+T L + + AG EN + M+ T
Sbjct: 383 IGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRST 442
Query: 465 -GIHKEPG 471
GI EPG
Sbjct: 443 YGI--EPG 448
Score = 118 bits (296), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 140/273 (51%), Gaps = 3/273 (1%)
Query: 33 FIQQLQECKHLISLASVHSEILKSGFLSNTFTLNHLINCYVRLKKTQVARQLFDEMLEPN 92
F+ + HL +H +L+SGF ++ N LI+ Y + K+ + + +F EM N
Sbjct: 215 FLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKN 274
Query: 93 VVSYTSLMAGYINMGQPQIALLLFQKMLGNLVWPNEFTFATVIKACSMLADLITGKQIHT 152
VS+ SL+A Y+ + + A +L+ + ++V ++F ++V+ AC+ +A L G+ IH
Sbjct: 275 AVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHA 334
Query: 153 HIETFGFQYNLVVCSSLVDMYGKCNDVDGARRVFDLMGCRNVVSWTSIIVAHAQNAQGHE 212
H + + V S+LVDMYGKC ++ + + FD M +N+V+ S+I +A Q
Sbjct: 335 HAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDM 394
Query: 213 ALEMFREFNYQS-RDRPNQHMLASVINACASLGRLVSG-KVAHGVVVRSGCEFNDVVASA 270
AL +F E + PN S+++AC+ G + +G K+ + G E S
Sbjct: 395 ALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSC 454
Query: 271 LVDMYAKCGSVNYSDKVFNRIS-NPSVVTYTSM 302
+VDM + G V + + ++ P++ + ++
Sbjct: 455 IVDMLGRAGMVERAYEFIKKMPIQPTISVWGAL 487
>sp|Q9SMZ2|PP347_ARATH Pentatricopeptide repeat-containing protein At4g33170
OS=Arabidopsis thaliana GN=PCMP-H53 PE=3 SV=1
Length = 990
Score = 393 bits (1010), Expect = e-108, Method: Compositional matrix adjust.
Identities = 203/557 (36%), Positives = 326/557 (58%), Gaps = 5/557 (0%)
Query: 49 VHSEILKSGFLSNTFTLNHLINCYVRLKKTQVARQLFDEMLEPNVVSYTSLMAGYINMGQ 108
VH +K +S++F LI+ Y R + + A LF E ++V++ ++MAGY
Sbjct: 439 VHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILF-ERHNFDLVAWNAMMAGYTQSHD 497
Query: 109 PQIALLLFQKMLGNLVWPNEFTFATVIKACSMLADLITGKQIHTHIETFGFQYNLVVCSS 168
L LF M ++FT ATV K C L + GKQ+H + G+ +L V S
Sbjct: 498 GHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSG 557
Query: 169 LVDMYGKCNDVDGARRVFDLMGCRNVVSWTSIIVAHAQNAQGHEALEMFREFNYQSRDRP 228
++DMY KC D+ A+ FD + + V+WT++I +N + A +F + P
Sbjct: 558 ILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGV-LP 616
Query: 229 NQHMLASVINACASLGRLVSGKVAHGVVVRSGCEFNDVVASALVDMYAKCGSVNYSDKVF 288
++ +A++ A + L L G+ H ++ C + V ++LVDMYAKCGS++ + +F
Sbjct: 617 DEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLF 676
Query: 289 NRISNPSVVTYTSMIVGAAKYGLGRFSLDLFNEMISRGIKPNDVTFVGVLHACSHSGLVD 348
RI ++ + +M+VG A++G G+ +L LF +M S GIKP+ VTF+GVL ACSHSGLV
Sbjct: 677 KRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVS 736
Query: 349 EGIQHLDSMYRKYGIIPDAKHYTCVVDMLGRTGRLDEAYKLAKSIQVDPDGGPLLWGTLL 408
E +H+ SM+ YGI P+ +HY+C+ D LGR G + +A L +S+ ++ ++ TLL
Sbjct: 737 EAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEASAS--MYRTLL 794
Query: 409 SASRLHGRVDIAVEASNQLIESNQQVANAYVTLSNTYALAGEWENVHSLRSEMKRTGIHK 468
+A R+ G + + +L+E ++AYV LSN YA A +W+ + R+ MK + K
Sbjct: 795 AACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLARTMMKGHKVKK 854
Query: 469 EPGCSWVEIRDQTYAFYAGNALFERGSEVLSLLRELERKMKERGYVGGKTGLVFVDVEDE 528
+PG SW+E++++ + F + + + ++++ R +K+ GYV +T VDVE+E
Sbjct: 855 DPGFSWIEVKNKIHIFVVDDRSNRQTELIYRKVKDMIRDIKQEGYV-PETDFTLVDVEEE 913
Query: 529 AREEIVGLHSERLALAFGLISIPKGITIRIMKNLRMCRDCHDVFKLISDIVERDFVVRDV 588
+E + HSE+LA+AFGL+S P IR++KNLR+C DCH+ K I+ + R+ V+RD
Sbjct: 914 EKERALYYHSEKLAVAFGLLSTPPSTPIRVIKNLRVCGDCHNAMKYIAKVYNREIVLRDA 973
Query: 589 NRFHHFRNGSCSCGDFW 605
NRFH F++G CSCGD+W
Sbjct: 974 NRFHRFKDGICSCGDYW 990
Score = 159 bits (402), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 114/389 (29%), Positives = 194/389 (49%), Gaps = 12/389 (3%)
Query: 33 FIQQLQECKHLISLA---SVHSEILKSGFLSNTFTLNHLINCYVRLKKTQVARQLFDEML 89
FI L + SLA VH LK G N LIN Y +L+K AR +FD M
Sbjct: 318 FILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMS 377
Query: 90 EPNVVSYTSLMAGYINMGQPQIALLLFQKMLGNLVWPNEFTFATVIKACSMLAD-LITGK 148
E +++S+ S++AG G A+ LF ++L + P+++T +V+KA S L + L K
Sbjct: 378 ERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSK 437
Query: 149 QIHTHIETFGFQYNLVVCSSLVDMYGKCNDVDGARRVFDLMGCRNVVSWTSIIVAHAQNA 208
Q+H H + V ++L+D Y + + A +F+ ++V+W +++ + Q+
Sbjct: 438 QVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFERHNF-DLVAWNAMMAGYTQSH 496
Query: 209 QGHEALEMFREFNYQSRDRPNQHMLASVINACASLGRLVSGKVAHGVVVRSGCEFNDVVA 268
GH+ L++F + Q +R + LA+V C L + GK H ++SG + + V+
Sbjct: 497 DGHKTLKLFALMHKQG-ERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVS 555
Query: 269 SALVDMYAKCGSVNYSDKVFNRISNPSVVTYTSMIVGAAKYGLGRFSLDLFNEMISRGIK 328
S ++DMY KCG ++ + F+ I P V +T+MI G + G + +F++M G+
Sbjct: 556 SGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVL 615
Query: 329 PNDVTFVGVLHACSHSGLVDEGIQ-HLDSMYRKYGIIPDAKHYTCVVDMLGRTGRLDEAY 387
P++ T + A S +++G Q H +++ K D T +VDM + G +D+AY
Sbjct: 616 PDEFTIATLAKASSCLTALEQGRQIHANAL--KLNCTNDPFVGTSLVDMYAKCGSIDDAY 673
Query: 388 KLAKSIQVDPDGGPLLWGTLLSASRLHGR 416
L K I++ W +L HG
Sbjct: 674 CLFKRIEM---MNITAWNAMLVGLAQHGE 699
Score = 109 bits (272), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 88/329 (26%), Positives = 157/329 (47%), Gaps = 7/329 (2%)
Query: 100 MAGYINMGQPQIALLLFQKMLGNLVWPNEFTFATVIKACSMLADLITGKQIHTHIETFGF 159
++ Y++ GQ L F M+ + V ++ TF ++ + L G+Q+H G
Sbjct: 287 LSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGL 346
Query: 160 QYNLVVCSSLVDMYGKCNDVDGARRVFDLMGCRNVVSWTSIIVAHAQNAQGHEALEMFRE 219
L V +SL++MY K AR VFD M R+++SW S+I AQN EA+ +F +
Sbjct: 347 DLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQ 406
Query: 220 FNYQSRDRPNQHMLASVINACASLGRLVS-GKVAHGVVVRSGCEFNDVVASALVDMYAKC 278
+ +P+Q+ + SV+ A +SL +S K H ++ + V++AL+D Y++
Sbjct: 407 L-LRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRN 465
Query: 279 GSVNYSDKVFNRISNPSVVTYTSMIVGAAKYGLGRFSLDLFNEMISRGIKPNDVTFVGVL 338
+ ++ +F R N +V + +M+ G + G +L LF M +G + +D T V
Sbjct: 466 RCMKEAEILFER-HNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVF 524
Query: 339 HACSHSGLVDEGIQHLDSMYRKYGIIPDAKHYTCVVDMLGRTGRLDEAYKLAKSIQVDPD 398
C +++G Q + + K G D + ++DM + G + A SI V D
Sbjct: 525 KTCGFLFAINQGKQ-VHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDD 583
Query: 399 GGPLLWGTLLSASRLHGRVDIAVEASNQL 427
+ W T++S +G + A +Q+
Sbjct: 584 ---VAWTTMISGCIENGEEERAFHVFSQM 609
Score = 97.4 bits (241), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 101/198 (51%), Gaps = 6/198 (3%)
Query: 142 ADLITGKQIHTHIETFGFQYNLVVCSSLVDMYGKCNDVDGARRVFDLMGCRNVVSWTSII 201
+DL+ GK H I TF + ++L+ MY KC + ARRVFD M R++VSW SI+
Sbjct: 53 SDLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSIL 112
Query: 202 VAHAQNAQG-----HEALEMFREFNYQSRDRPNQHMLASVINACASLGRLVSGKVAHGVV 256
A+AQ+++ +A +FR Q ++ L+ ++ C G + + + HG
Sbjct: 113 AAYAQSSECVVENIQQAFLLFRILR-QDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYA 171
Query: 257 VRSGCEFNDVVASALVDMYAKCGSVNYSDKVFNRISNPSVVTYTSMIVGAAKYGLGRFSL 316
+ G + ++ VA ALV++Y K G V +F + VV + M+ + G ++
Sbjct: 172 CKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAI 231
Query: 317 DLFNEMISRGIKPNDVTF 334
DL + S G+ PN++T
Sbjct: 232 DLSSAFHSSGLNPNEITL 249
Score = 70.9 bits (172), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 92/187 (49%), Gaps = 6/187 (3%)
Query: 49 VHSEILKSGFLSNTFTLNHLINCYVRLKKTQVARQLFDEMLEPNVVSYTSLMAGYINMGQ 108
H+ IL F +N+LI+ Y + AR++FD+M + ++VS+ S++A Y +
Sbjct: 61 THARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSSE 120
Query: 109 -----PQIALLLFQKMLGNLVWPNEFTFATVIKACSMLADLITGKQIHTHIETFGFQYNL 163
Q A LLF+ + ++V+ + T + ++K C + + H + G +
Sbjct: 121 CVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDE 180
Query: 164 VVCSSLVDMYGKCNDVDGARRVFDLMGCRNVVSWTSIIVAHAQNAQGHEALEMFREFNYQ 223
V +LV++Y K V + +F+ M R+VV W ++ A+ + EA+++ F +
Sbjct: 181 FVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAF-HS 239
Query: 224 SRDRPNQ 230
S PN+
Sbjct: 240 SGLNPNE 246
>sp|Q9ZUW3|PP172_ARATH Pentatricopeptide repeat-containing protein At2g27610
OS=Arabidopsis thaliana GN=PCMP-H60 PE=2 SV=1
Length = 868
Score = 393 bits (1010), Expect = e-108, Method: Compositional matrix adjust.
Identities = 208/583 (35%), Positives = 351/583 (60%), Gaps = 14/583 (2%)
Query: 29 TKAHFIQQLQECKHLISL---ASVHSEILKSGFLSNTFTLNHLINCYVRLKKTQVARQLF 85
+++ F ++ C +L L +H ++K GFL + L+ Y + A +LF
Sbjct: 294 SESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLF 353
Query: 86 DEM-LEPNVVSYTSLMAGYINMGQPQIALLLFQKMLGNLVWPNEFTFATVIKACSMLADL 144
E+ NVVS+T++++G++ + A+ LF +M V PNEFT++ ++ A +
Sbjct: 354 KEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALP----V 409
Query: 145 ITGKQIHTHIETFGFQYNLVVCSSLVDMYGKCNDVDGARRVFDLMGCRNVVSWTSIIVAH 204
I+ ++H + ++ + V ++L+D Y K V+ A +VF + +++V+W++++ +
Sbjct: 410 ISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGY 469
Query: 205 AQNAQGHEALEMFREFNYQSRDRPNQHMLASVINACASL-GRLVSGKVAHGVVVRSGCEF 263
AQ + A++MF E + +PN+ +S++N CA+ + GK HG ++S +
Sbjct: 470 AQTGETEAAIKMFGELT-KGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDS 528
Query: 264 NDVVASALVDMYAKCGSVNYSDKVFNRISNPSVVTYTSMIVGAAKYGLGRFSLDLFNEMI 323
+ V+SAL+ MYAK G++ +++VF R +V++ SMI G A++G +LD+F EM
Sbjct: 529 SLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMK 588
Query: 324 SRGIKPNDVTFVGVLHACSHSGLVDEGIQHLDSMYRKYGIIPDAKHYTCVVDMLGRTGRL 383
R +K + VTF+GV AC+H+GLV+EG ++ D M R I P +H +C+VD+ R G+L
Sbjct: 589 KRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQL 648
Query: 384 DEAYKLAKSIQVDPDGGPLLWGTLLSASRLHGRVDIAVEASNQLIESNQQVANAYVTLSN 443
++A K+ +++ +P G +W T+L+A R+H + ++ A+ ++I + + AYV LSN
Sbjct: 649 EKAMKVIENMP-NP-AGSTIWRTILAACRVHKKTELGRLAAEKIIAMKPEDSAAYVLLSN 706
Query: 444 TYALAGEWENVHSLRSEMKRTGIHKEPGCSWVEIRDQTYAFYAGNALFERGSEVLSLLRE 503
YA +G+W+ +R M + KEPG SW+E++++TY+F AG+ ++ L +
Sbjct: 707 MYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYSFLAGDRSHPLKDQIYMKLED 766
Query: 504 LERKMKERGYVGGKTGLVFVDVEDEAREEIVGLHSERLALAFGLISIPKGITIRIMKNLR 563
L ++K+ GY T V D++DE +E ++ HSERLA+AFGLI+ PKG + I+KNLR
Sbjct: 767 LSTRLKDLGY-EPDTSYVLQDIDDEHKEAVLAQHSERLAIAFGLIATPKGSPLLIIKNLR 825
Query: 564 MCRDCHDVFKLISDIVERDFVVRDVNRFHHF-RNGSCSCGDFW 605
+C DCH V KLI+ I ER+ VVRD NRFHHF +G CSCGDFW
Sbjct: 826 VCGDCHLVIKLIAKIEEREIVVRDSNRFHHFSSDGVCSCGDFW 868
Score = 172 bits (436), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 114/385 (29%), Positives = 202/385 (52%), Gaps = 19/385 (4%)
Query: 49 VHSEILKSGFLSNTFTLNHLINCYVRLKKTQVARQLFDEMLEPNVVSYTSLMAGYINMGQ 108
VH+ ++K+G N LIN Y++ + AR LFD+ +VV++ S+++GY G
Sbjct: 216 VHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGL 275
Query: 109 PQIALLLFQKMLGNLVWPNEFTFATVIKACSMLADLITGKQIHTHIETFGFQYNLVVCSS 168
AL +F M N V +E +FA+VIK C+ L +L +Q+H + +GF ++ + ++
Sbjct: 276 DLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTA 335
Query: 169 LVDMYGKCNDVDGARRVFDLMGC-RNVVSWTSIIVAHAQNAQGHEALEMFREFNYQSRDR 227
L+ Y KC + A R+F +GC NVVSWT++I QN EA+++F E + R
Sbjct: 336 LMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGV-R 394
Query: 228 PNQHMLASVINACASLGRLVSGKVAHGVVVRSGCEFNDVVASALVDMYAKCGSVNYSDKV 287
PN+ + ++ A ++S H VV++ E + V +AL+D Y K G V + KV
Sbjct: 395 PNEFTYSVILTALP----VISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKV 450
Query: 288 FNRISNPSVVTYTSMIVGAAKYGLGRFSLDLFNEMISRGIKPNDVTFVGVLHACSHSGL- 346
F+ I + +V +++M+ G A+ G ++ +F E+ GIKPN+ TF +L+ C+ +
Sbjct: 451 FSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNAS 510
Query: 347 VDEGIQHLDSMYRKYGIIPDAKHYTCV----VDMLGRTGRLDEAYKLAKSIQVDPDGGPL 402
+ +G Q + + I CV + M + G ++ A ++ K Q + D +
Sbjct: 511 MGQGKQ-----FHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKR-QREKD--LV 562
Query: 403 LWGTLLSASRLHGRVDIAVEASNQL 427
W +++S HG+ A++ ++
Sbjct: 563 SWNSMISGYAQHGQAMKALDVFKEM 587
Score = 164 bits (416), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 113/384 (29%), Positives = 195/384 (50%), Gaps = 14/384 (3%)
Query: 49 VHSEILKSGFLSNTFTLNHLINCYVRLKKTQVARQLFDEMLEPNVVSYTSLMAGYINMGQ 108
+H + +K GFL + L++ Y++ + R++FDEM E NVV++T+L++GY
Sbjct: 115 LHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARNSM 174
Query: 109 PQIALLLFQKMLGNLVWPNEFTFATVIKACSMLADLITGKQIHTHIETFGFQYNLVVCSS 168
L LF +M PN FTFA + + G Q+HT + G + V +S
Sbjct: 175 NDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNS 234
Query: 169 LVDMYGKCNDVDGARRVFDLMGCRNVVSWTSIIVAHAQNAQGHEALEMF--REFNYQSRD 226
L+++Y KC +V AR +FD ++VV+W S+I +A N EAL MF NY
Sbjct: 235 LINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYV--- 291
Query: 227 RPNQHMLASVINACASLGRLVSGKVAHGVVVRSGCEFNDVVASALVDMYAKCGSVNYSDK 286
R ++ ASVI CA+L L + H VV+ G F+ + +AL+ Y+KC ++ + +
Sbjct: 292 RLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALR 351
Query: 287 VFNRISN-PSVVTYTSMIVGAAKYGLGRFSLDLFNEMISRGIKPNDVTFVGVLHACSHSG 345
+F I +VV++T+MI G + ++DLF+EM +G++PN+ T+ +L A
Sbjct: 352 LFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVIS 411
Query: 346 LVDEGIQHLDSMYRKYGIIPDAKHYTCVVDMLGRTGRLDEAYKLAKSIQVDPDGGPLLWG 405
+ Q + + Y + + T ++D + G+++EA K+ I D + W
Sbjct: 412 PSEVHAQVVKTNYERSSTVG-----TALLDAYVKLGKVEEAAKVFSGID---DKDIVAWS 463
Query: 406 TLLSASRLHGRVDIAVEASNQLIE 429
+L+ G + A++ +L +
Sbjct: 464 AMLAGYAQTGETEAAIKMFGELTK 487
Score = 137 bits (345), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 98/330 (29%), Positives = 167/330 (50%), Gaps = 4/330 (1%)
Query: 81 ARQLFDEMLEPNVVSYTSLMAGYINMGQPQIALLLFQKMLGNLVWPNEFTFATVIKACSM 140
A LFD+ + SY SL+ G+ G+ Q A LF + + + F++V+K +
Sbjct: 46 AHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSAT 105
Query: 141 LADLITGKQIHTHIETFGFQYNLVVCSSLVDMYGKCNDVDGARRVFDLMGCRNVVSWTSI 200
L D + G+Q+H FGF ++ V +SLVD Y K ++ R+VFD M RNVV+WT++
Sbjct: 106 LCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTL 165
Query: 201 IVAHAQNAQGHEALEMFREFNYQSRDRPNQHMLASVINACASLGRLVSGKVAHGVVVRSG 260
I +A+N+ E L +F + +PN A+ + A G G H VVV++G
Sbjct: 166 ISGYARNSMNDEVLTLFMRMQNEG-TQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNG 224
Query: 261 CEFNDVVASALVDMYAKCGSVNYSDKVFNRISNPSVVTYTSMIVGAAKYGLGRFSLDLFN 320
+ V+++L+++Y KCG+V + +F++ SVVT+ SMI G A GL +L +F
Sbjct: 225 LDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFY 284
Query: 321 EMISRGIKPNDVTFVGVLHACSHSGLVDEGIQHLDSMYRKYGIIPDAKHYTCVVDMLGRT 380
M ++ ++ +F V+ C++ + + L KYG + D T ++ +
Sbjct: 285 SMRLNYVRLSESSFASVIKLCANLKEL-RFTEQLHCSVVKYGFLFDQNIRTALMVAYSKC 343
Query: 381 GRLDEAYKLAKSIQVDPDGGPLLWGTLLSA 410
+ +A +L K I G + W ++S
Sbjct: 344 TAMLDALRLFKEIGC--VGNVVSWTAMISG 371
>sp|Q9LZ19|PP364_ARATH Pentatricopeptide repeat-containing protein At5g04780
OS=Arabidopsis thaliana GN=PCMP-H16 PE=2 SV=2
Length = 635
Score = 392 bits (1007), Expect = e-108, Method: Compositional matrix adjust.
Identities = 211/558 (37%), Positives = 326/558 (58%), Gaps = 4/558 (0%)
Query: 48 SVHSEILKSGFLSNTFTLNHLINCYVRLKKTQVARQLFDEMLEPNVVSYTSLMAGYINMG 107
+ H +I++ + LN LIN Y + ++ARQ+FD MLE ++VS+ +++ Y
Sbjct: 82 ACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNR 141
Query: 108 QPQIALLLFQKMLGNLVWPNEFTFATVIKACSMLADLITGKQIHTHIETFGFQYNLVVCS 167
AL +F +M +EFT ++V+ AC + D + K++H NL V +
Sbjct: 142 MESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHCLSVKTCIDLNLYVGT 201
Query: 168 SLVDMYGKCNDVDGARRVFDLMGCRNVVSWTSIIVAHAQNAQGHEALEMFREFNYQSRDR 227
+L+D+Y KC + A +VF+ M ++ V+W+S++ + QN EAL ++R S ++
Sbjct: 202 ALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQ 261
Query: 228 PNQHMLASVINACASLGRLVSGKVAHGVVVRSGCEFNDVVASALVDMYAKCGSVNYSDKV 287
NQ L+SVI AC++L L+ GK H V+ +SG N VAS+ VDMYAKCGS+ S +
Sbjct: 262 -NQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYII 320
Query: 288 FNRISNPSVVTYTSMIVGAAKYGLGRFSLDLFNEMISRGIKPNDVTFVGVLHACSHSGLV 347
F+ + ++ + ++I G AK+ + + LF +M G+ PN+VTF +L C H+GLV
Sbjct: 321 FSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLV 380
Query: 348 DEGIQHLDSMYRKYGIIPDAKHYTCVVDMLGRTGRLDEAYKLAKSIQVDPDGGPLLWGTL 407
+EG + M YG+ P+ HY+C+VD+LGR G L EAY+L KSI DP +WG+L
Sbjct: 381 EEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTAS--IWGSL 438
Query: 408 LSASRLHGRVDIAVEASNQLIESNQQVANAYVTLSNTYALAGEWENVHSLRSEMKRTGIH 467
L++ R++ +++A A+ +L E + A +V LSN YA +WE + R ++ +
Sbjct: 439 LASCRVYKNLELAEVAAEKLFELEPENAGNHVLLSNIYAANKQWEEIAKSRKLLRDCDVK 498
Query: 468 KEPGCSWVEIRDQTYAFYAGNALFERGSEVLSLLRELERKMKERGYVGGKTGLVFVDVED 527
K G SW++I+D+ + F G + R E+ S L L K ++ GY + DVE
Sbjct: 499 KVRGKSWIDIKDKVHTFSVGESGHPRIREICSTLDNLVIKFRKFGYKPSVEHELH-DVEI 557
Query: 528 EAREEIVGLHSERLALAFGLISIPKGITIRIMKNLRMCRDCHDVFKLISDIVERDFVVRD 587
+EE++ HSE+LAL FGL+ +P+ +RIMKNLR+C DCH+ K S R +VRD
Sbjct: 558 GKKEELLMQHSEKLALVFGLMCLPESSPVRIMKNLRICVDCHEFMKAASMATRRFIIVRD 617
Query: 588 VNRFHHFRNGSCSCGDFW 605
VNRFHHF +G CSCGDFW
Sbjct: 618 VNRFHHFSDGHCSCGDFW 635
Score = 119 bits (298), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 93/354 (26%), Positives = 173/354 (48%), Gaps = 23/354 (6%)
Query: 63 FTLNHLINCYVRLKKTQVARQLFDEMLEPNVVSYTSLMAGYINMGQPQIALLLFQKMLGN 122
FT+N LI C V +++ + L N+ S++A Y Q +++ + N
Sbjct: 14 FTVNFLIRCKVLPRRSNTSS------LSRNI----SVLASY---DQEEVSPGRYSNEFSN 60
Query: 123 LVWPNEFTFATVIKACSMLADLITGKQIHTHIETFGFQYNLVVCSSLVDMYGKCNDVDGA 182
+E +++ C+ ++ K H I + ++ + + L++ Y KC V+ A
Sbjct: 61 RNLVHE-----ILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELA 115
Query: 183 RRVFDLMGCRNVVSWTSIIVAHAQNAQGHEALEMFREFNYQSRDRPNQHMLASVINACAS 242
R+VFD M R++VSW ++I + +N EAL++F E + + ++ ++SV++AC
Sbjct: 116 RQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGF-KFSEFTISSVLSACGV 174
Query: 243 LGRLVSGKVAHGVVVRSGCEFNDVVASALVDMYAKCGSVNYSDKVFNRISNPSVVTYTSM 302
+ K H + V++ + N V +AL+D+YAKCG + + +VF + + S VT++SM
Sbjct: 175 NCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSM 234
Query: 303 IVGAAKYGLGRFSLDLFNEMISRGIKPNDVTFVGVLHACSHSGLVDEGIQHLDSMYRKYG 362
+ G + +L L+ ++ N T V+ ACS+ + EG Q + ++ K G
Sbjct: 235 VAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQ-MHAVICKSG 293
Query: 363 IIPDAKHYTCVVDMLGRTGRLDEAYKLAKSIQVDPDGGPLLWGTLLSASRLHGR 416
+ + VDM + G L E+Y + +Q + LW T++S H R
Sbjct: 294 FGSNVFVASSAVDMYAKCGSLRESYIIFSEVQ---EKNLELWNTIISGFAKHAR 344
Score = 113 bits (282), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 78/273 (28%), Positives = 141/273 (51%), Gaps = 9/273 (3%)
Query: 39 ECKHLISLASVHSEILKSGFLSNTFTLNHLINCYVRLKKTQVARQLFDEMLEPNVVSYTS 98
ECK L H +K+ N + L++ Y + + A Q+F+ M + + V+++S
Sbjct: 180 ECKKL------HCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSS 233
Query: 99 LMAGYINMGQPQIALLLFQKMLGNLVWPNEFTFATVIKACSMLADLITGKQIHTHIETFG 158
++AGY+ + ALLL+++ + N+FT ++VI ACS LA LI GKQ+H I G
Sbjct: 234 MVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSG 293
Query: 159 FQYNLVVCSSLVDMYGKCNDVDGARRVFDLMGCRNVVSWTSIIVAHAQNAQGHEALEMFR 218
F N+ V SS VDMY KC + + +F + +N+ W +II A++A+ E + +F
Sbjct: 294 FGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFE 353
Query: 219 EFNYQSRDRPNQHMLASVINACASLGRLVSGKVAHGVVVRS-GCEFNDVVASALVDMYAK 277
+ Q PN+ +S+++ C G + G+ ++ + G N V S +VD+ +
Sbjct: 354 KMQ-QDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGR 412
Query: 278 CGSVNYSDKVFNRIS-NPSVVTYTSMIVGAAKY 309
G ++ + ++ I +P+ + S++ Y
Sbjct: 413 AGLLSEAYELIKSIPFDPTASIWGSLLASCRVY 445
Score = 70.9 bits (172), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/238 (22%), Positives = 117/238 (49%), Gaps = 8/238 (3%)
Query: 224 SRDRPNQHMLASVINACASLGRLVSGKVAHGVVVRSGCEFNDVVASALVDMYAKCGSVNY 283
S + N++++ ++ CA G ++ K HG ++R E + + + L++ Y+KCG V
Sbjct: 55 SNEFSNRNLVHEILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVEL 114
Query: 284 SDKVFNRISNPSVVTYTSMIVGAAKYGLGRFSLDLFNEMISRGIKPNDVTFVGVLHACSH 343
+ +VF+ + S+V++ +MI + + +LD+F EM + G K ++ T VL AC
Sbjct: 115 ARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGV 174
Query: 344 SGLVDEGIQHLDSMYRKYGIIPDAKHYTCVVDMLGRTGRLDEAYKLAKSIQVDPDGGPLL 403
+ E + L + K I + T ++D+ + G + +A ++ +S+Q D +
Sbjct: 175 NCDALE-CKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQ---DKSSVT 230
Query: 404 WGTLLSASRLHGRVDIAV----EASNQLIESNQQVANAYVTLSNTYALAGEWENVHSL 457
W ++++ + + A+ A +E NQ ++ + + A E + +H++
Sbjct: 231 WSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAV 288
>sp|Q9CAA8|PP108_ARATH Putative pentatricopeptide repeat-containing protein At1g68930
OS=Arabidopsis thaliana GN=PCMP-H22 PE=3 SV=1
Length = 743
Score = 390 bits (1001), Expect = e-107, Method: Compositional matrix adjust.
Identities = 208/587 (35%), Positives = 330/587 (56%), Gaps = 34/587 (5%)
Query: 49 VHSEILKSGFLSNTFTLNHLINCYVRLKKTQVARQLFDEMLEPNVVSYTSLMAGYINMGQ 108
+H +++K GF S + L+ Y + A+++F + + N V Y SLM G + G
Sbjct: 161 IHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLACGM 220
Query: 109 PQIALLLFQKMLGNLV-WP-----------------------------NEFTFATVIKAC 138
+ AL LF+ M + V W +++ F +V+ AC
Sbjct: 221 IEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPAC 280
Query: 139 SMLADLITGKQIHTHIETFGFQYNLVVCSSLVDMYGKCNDVDGARRVFDLMGCRNVVSWT 198
L + GKQIH I FQ ++ V S+L+DMY KC + A+ VFD M +NVVSWT
Sbjct: 281 GGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWT 340
Query: 199 SIIVAHAQNAQGHEALEMFREFNYQSRDRPNQHMLASVINACASLGRLVSGKVAHGVVVR 258
+++V + Q + EA+++F + D P+ + L I+ACA++ L G HG +
Sbjct: 341 AMVVGYGQTGRAEEAVKIFLDMQRSGID-PDHYTLGQAISACANVSSLEEGSQFHGKAIT 399
Query: 259 SGCEFNDVVASALVDMYAKCGSVNYSDKVFNRISNPSVVTYTSMIVGAAKYGLGRFSLDL 318
SG V+++LV +Y KCG ++ S ++FN ++ V++T+M+ A++G ++ L
Sbjct: 400 SGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQL 459
Query: 319 FNEMISRGIKPNDVTFVGVLHACSHSGLVDEGIQHLDSMYRKYGIIPDAKHYTCVVDMLG 378
F++M+ G+KP+ VT GV+ ACS +GLV++G ++ M +YGI+P HY+C++D+
Sbjct: 460 FDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFS 519
Query: 379 RTGRLDEAYKLAKSIQVDPDGGPLLWGTLLSASRLHGRVDIAVEASNQLIESNQQVANAY 438
R+GRL+EA + + PD + W TLLSA R G ++I A+ LIE + Y
Sbjct: 520 RSGRLEEAMRFINGMPFPPDA--IGWTTLLSACRNKGNLEIGKWAAESLIELDPHHPAGY 577
Query: 439 VTLSNTYALAGEWENVHSLRSEMKRTGIHKEPGCSWVEIRDQTYAFYAGNALFERGSEVL 498
LS+ YA G+W++V LR M+ + KEPG SW++ + + ++F A + ++
Sbjct: 578 TLLSSIYASKGKWDSVAQLRRGMREKNVKKEPGQSWIKWKGKLHSFSADDESSPYLDQIY 637
Query: 499 SLLRELERKMKERGYVGGKTGLVFVDVEDEAREEIVGLHSERLALAFGLISIPKGITIRI 558
+ L EL K+ + GY T V DVE+ + +++ HSERLA+AFGLI +P G IR+
Sbjct: 638 AKLEELNNKIIDNGY-KPDTSFVHHDVEEAVKVKMLNYHSERLAIAFGLIFVPSGQPIRV 696
Query: 559 MKNLRMCRDCHDVFKLISDIVERDFVVRDVNRFHHFRNGSCSCGDFW 605
KNLR+C DCH+ K IS + R+ +VRD RFH F++G+CSCGDFW
Sbjct: 697 GKNLRVCVDCHNATKHISSVTGREILVRDAVRFHRFKDGTCSCGDFW 743
Score = 159 bits (402), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 115/447 (25%), Positives = 201/447 (44%), Gaps = 75/447 (16%)
Query: 49 VHSEILKSGFLSNTFTLNHLINCYVRLKKTQVARQLFDEMLEPNVVSYTSLMAGYINMGQ 108
+H I+++ TF N++++ Y +K + AR++FD + +PN+ S+ +L+ Y G
Sbjct: 28 IHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQPNLFSWNNLLLAYSKAGL 87
Query: 109 PQIALLLFQKM----------------LGNLVWP----------------NEFTFATVIK 136
F+K+ L LV T T++K
Sbjct: 88 ISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLMTMLK 147
Query: 137 ACSMLADLITGKQIHTHIETFGFQYNLVVCSSLVDMYGKCNDVDGARRVF---------- 186
S + GKQIH + GF+ L+V S L+ MY + A++VF
Sbjct: 148 LSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVM 207
Query: 187 ------DLMGC--------------RNVVSWTSIIVAHAQNAQGHEALEMFREFNYQSRD 226
L+ C ++ VSW ++I AQN EA+E FRE Q
Sbjct: 208 YNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGL- 266
Query: 227 RPNQHMLASVINACASLGRLVSGKVAHGVVVRSGCEFNDVVASALVDMYAKCGSVNYSDK 286
+ +Q+ SV+ AC LG + GK H ++R+ + + V SAL+DMY KC ++Y+
Sbjct: 267 KMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKT 326
Query: 287 VFNRISNPSVVTYTSMIVGAAKYGLGRFSLDLFNEMISRGIKPNDVTFVGVLHACSHSGL 346
VF+R+ +VV++T+M+VG + G ++ +F +M GI P+ T + AC++
Sbjct: 327 VFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSS 386
Query: 347 VDEGIQHLDSMYRKYGIIPDAKHYTCV----VDMLGRTGRLDEAYKLAKSIQVDPDGGPL 402
++EG S + I HY V V + G+ G +D++ +L + V +
Sbjct: 387 LEEG-----SQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRD---AV 438
Query: 403 LWGTLLSASRLHGRVDIAVEASNQLIE 429
W ++SA GR ++ +++++
Sbjct: 439 SWTAMVSAYAQFGRAVETIQLFDKMVQ 465
Score = 80.9 bits (198), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 107/474 (22%), Positives = 187/474 (39%), Gaps = 108/474 (22%)
Query: 108 QPQIALLLFQKMLGNLVWPNEFTFATVIKACSMLADLITGKQIHTHIETFGFQYNLVVCS 167
Q + ++ ++ L +P F + ++ A +++ +++ I Q NL +
Sbjct: 21 QSRYVKMIHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFDRIP----QPNLFSWN 76
Query: 168 SLVDMYGKCNDVDGARRVFDLMGCRNVVSWTSIIVAHAQNAQGHEALEMFREFNYQSRDR 227
+L+ Y K + F+ + R+ V+W +I ++ + A++ +
Sbjct: 77 NLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSAN 136
Query: 228 PNQHMLASVINACASLGRLVSGKVAHGVVVRSGCEFNDVVASALVDMYAKCGSVNYSDKV 287
+ L +++ +S G + GK HG V++ G E +V S L+ MYA G ++ + KV
Sbjct: 137 LTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKV 196
Query: 288 FNRISNPSVVTYTS------------------------------MIVGAAKYGLGRFSLD 317
F + + + V Y S MI G A+ GL + +++
Sbjct: 197 FYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIE 256
Query: 318 LFNEMISRGIKPNDVTFVGVLHACSHSGLVDEGIQ------------------HLDSMYR 359
F EM +G+K + F VL AC G ++EG Q L MY
Sbjct: 257 CFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYC 316
Query: 360 KYGIIPDAK------------HYTCVVDMLGRTGRLDEAYKLAKSIQ---VDPDGGPLLW 404
K + AK +T +V G+TGR +EA K+ +Q +DPD L
Sbjct: 317 KCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTL-- 374
Query: 405 GTLLSA----------SRLHGRVDIAVEASNQLIESNQQVANAYVTLSNT----YALAGE 450
G +SA S+ HG+ ++ LI YVT+SN+ Y G+
Sbjct: 375 GQAISACANVSSLEEGSQFHGKA-----ITSGLIH--------YVTVSNSLVTLYGKCGD 421
Query: 451 WENVHSLRSEMKRTGIHKEPGCSWVEIRDQTYAFYAGNALFERGSEVLSLLREL 504
++ L +EM + SW A + A F R E + L ++
Sbjct: 422 IDDSTRLFNEM-----NVRDAVSWT-------AMVSAYAQFGRAVETIQLFDKM 463
>sp|Q9LN01|PPR21_ARATH Pentatricopeptide repeat-containing protein At1g08070
OS=Arabidopsis thaliana GN=PCMP-H12 PE=2 SV=1
Length = 741
Score = 389 bits (1000), Expect = e-107, Method: Compositional matrix adjust.
Identities = 202/540 (37%), Positives = 325/540 (60%), Gaps = 6/540 (1%)
Query: 68 LINCYVRLKKTQVARQLFDEMLEPNVVSYTSLMAGYINMGQPQIALLLFQKMLGNLVWPN 127
LI Y + A++LFDE+ +VVS+ ++++GY G + AL LF+ M+ V P+
Sbjct: 206 LIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPD 265
Query: 128 EFTFATVIKACSMLADLITGKQIHTHIETFGFQYNLVVCSSLVDMYGKCNDVDGARRVFD 187
E T TV+ AC+ + G+Q+H I+ GF NL + ++L+D+Y KC +++ A +F+
Sbjct: 266 ESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFE 325
Query: 188 LMGCRNVVSWTSIIVAHAQNAQGHEALEMFREFNYQSRDRPNQHMLASVINACASLGRLV 247
+ ++V+SW ++I + EAL +F+E +S + PN + S++ ACA LG +
Sbjct: 326 RLPYKDVISWNTLIGGYTHMNLYKEALLLFQEM-LRSGETPNDVTMLSILPACAHLGAID 384
Query: 248 SGKVAHGVVVR--SGCEFNDVVASALVDMYAKCGSVNYSDKVFNRISNPSVVTYTSMIVG 305
G+ H + + G + ++L+DMYAKCG + + +VFN I + S+ ++ +MI G
Sbjct: 385 IGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFG 444
Query: 306 AAKYGLGRFSLDLFNEMISRGIKPNDVTFVGVLHACSHSGLVDEGIQHLDSMYRKYGIIP 365
A +G S DLF+ M GI+P+D+TFVG+L ACSHSG++D G +M + Y + P
Sbjct: 445 FAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTP 504
Query: 366 DAKHYTCVVDMLGRTGRLDEAYKLAKSIQVDPDGGPLLWGTLLSASRLHGRVDIAVEASN 425
+HY C++D+LG +G EA ++ ++++PDG ++W +LL A ++HG V++ +
Sbjct: 505 KLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDG--VIWCSLLKACKMHGNVELGESFAE 562
Query: 426 QLIESNQQVANAYVTLSNTYALAGEWENVHSLRSEMKRTGIHKEPGCSWVEIRDQTYAFY 485
LI+ + +YV LSN YA AG W V R+ + G+ K PGCS +EI + F
Sbjct: 563 NLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFI 622
Query: 486 AGNALFERGSEVLSLLRELERKMKERGYVGGKTGLVFVDVEDEAREEIVGLHSERLALAF 545
G+ R E+ +L E+E +++ G+V T V ++E+E +E + HSE+LA+AF
Sbjct: 623 IGDKFHPRNREIYGMLEEMEVLLEKAGFV-PDTSEVLQEMEEEWKEGALRHHSEKLAIAF 681
Query: 546 GLISIPKGITIRIMKNLRMCRDCHDVFKLISDIVERDFVVRDVNRFHHFRNGSCSCGDFW 605
GLIS G + I+KNLR+CR+CH+ KLIS I +R+ + RD RFHHFR+G CSC D+W
Sbjct: 682 GLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 741
Score = 182 bits (462), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 115/421 (27%), Positives = 209/421 (49%), Gaps = 39/421 (9%)
Query: 37 LQECKHLISLASVHSEILKSGFLSNTFTLNHLINCYV---RLKKTQVARQLFDEMLEPNV 93
L CK L SL +H++++K G + + L+ LI + + A +F + EPN+
Sbjct: 40 LHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPNL 99
Query: 94 VSYTSLMAGYINMGQPQIALLLFQKMLGNLVWPNEFTFATVIKACSMLADLITGKQIHTH 153
+ + ++ G+ P AL L+ M+ + PN +TF V+K+C+ G+QIH H
Sbjct: 100 LIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGH 159
Query: 154 IETFGFQYNLVVCSSLVDMY---GKCND----------------------------VDGA 182
+ G +L V +SL+ MY G+ D ++ A
Sbjct: 160 VLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENA 219
Query: 183 RRVFDLMGCRNVVSWTSIIVAHAQNAQGHEALEMFREFNYQSRDRPNQHMLASVINACAS 242
+++FD + ++VVSW ++I +A+ EALE+F++ ++ RP++ + +V++ACA
Sbjct: 220 QKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDM-MKTNVRPDESTMVTVVSACAQ 278
Query: 243 LGRLVSGKVAHGVVVRSGCEFNDVVASALVDMYAKCGSVNYSDKVFNRISNPSVVTYTSM 302
G + G+ H + G N + +AL+D+Y+KCG + + +F R+ V+++ ++
Sbjct: 279 SGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTL 338
Query: 303 IVGAAKYGLGRFSLDLFNEMISRGIKPNDVTFVGVLHACSHSGLVDEGIQ-HLDSMYRKY 361
I G L + +L LF EM+ G PNDVT + +L AC+H G +D G H+ R
Sbjct: 339 IGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLK 398
Query: 362 GIIPDAKHYTCVVDMLGRTGRLDEAYKLAKSIQVDPDGGPLLWGTLLSASRLHGRVDIAV 421
G+ + T ++DM + G ++ A+++ SI W ++ +HGR D +
Sbjct: 399 GVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSS---WNAMIFGFAMHGRADASF 455
Query: 422 E 422
+
Sbjct: 456 D 456
>sp|Q0WN60|PPR48_ARATH Pentatricopeptide repeat-containing protein At1g18485
OS=Arabidopsis thaliana GN=PCMP-H8 PE=2 SV=2
Length = 970
Score = 389 bits (999), Expect = e-107, Method: Compositional matrix adjust.
Identities = 206/564 (36%), Positives = 325/564 (57%), Gaps = 5/564 (0%)
Query: 43 LISLASVHSEILKSGFLSNTFTLNHLINCYVRLKKTQVARQLFDEMLEPNVVSYTSLMAG 102
L SL +H LK F+ N N + Y + A+++F + V S+ +L+ G
Sbjct: 411 LPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGG 470
Query: 103 YINMGQPQIALLLFQKMLGNLVWPNEFTFATVIKACSMLADLITGKQIHTHIETFGFQYN 162
+ P+++L +M + + P+ FT +++ ACS L L GK++H I + +
Sbjct: 471 HAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERD 530
Query: 163 LVVCSSLVDMYGKCNDVDGARRVFDLMGCRNVVSWTSIIVAHAQNAQGHEALEMFREFNY 222
L V S++ +Y C ++ + +FD M +++VSW ++I + QN AL +FR+
Sbjct: 531 LFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVL 590
Query: 223 QSRDRPNQHMLASVINACASLGRLVSGKVAHGVVVRSGCEFNDVVASALVDMYAKCGSVN 282
M+ V AC+ L L G+ AH ++ E + +A +L+DMYAK GS+
Sbjct: 591 YGIQLCGISMMP-VFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSIT 649
Query: 283 YSDKVFNRISNPSVVTYTSMIVGAAKYGLGRFSLDLFNEMISRGIKPNDVTFVGVLHACS 342
S KVFN + S ++ +MI+G +GL + ++ LF EM G P+D+TF+GVL AC+
Sbjct: 650 QSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACN 709
Query: 343 HSGLVDEGIQHLDSMYRKYGIIPDAKHYTCVVDMLGRTGRLDEAYK-LAKSIQVDPDGGP 401
HSGL+ EG+++LD M +G+ P+ KHY CV+DMLGR G+LD+A + +A+ + + D G
Sbjct: 710 HSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVG- 768
Query: 402 LLWGTLLSASRLHGRVDIAVEASNQLIESNQQVANAYVTLSNTYALAGEWENVHSLRSEM 461
+W +LLS+ R+H +++ + + +L E + YV LSN YA G+WE+V +R M
Sbjct: 769 -IWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRM 827
Query: 462 KRTGIHKEPGCSWVEIRDQTYAFYAGNALFERGSEVLSLLRELERKMKERGYVGGKTGLV 521
+ K+ GCSW+E+ + ++F G + E+ SL LE K+ + GY +
Sbjct: 828 NEMSLRKDAGCSWIELNRKVFSFVVGERFLDGFEEIKSLWSILEMKISKMGYRPDTMSVQ 887
Query: 522 FVDVEDEAREEIVGLHSERLALAFGLISIPKGITIRIMKNLRMCRDCHDVFKLISDIVER 581
E+E E++ G HSE+LAL +GLI +G TIR+ KNLR+C DCH+ KLIS ++ER
Sbjct: 888 HDLSEEEKIEQLRG-HSEKLALTYGLIKTSEGTTIRVYKNLRICVDCHNAAKLISKVMER 946
Query: 582 DFVVRDVNRFHHFRNGSCSCGDFW 605
+ VVRD RFHHF+NG CSCGD+W
Sbjct: 947 EIVVRDNKRFHHFKNGVCSCGDYW 970
Score = 137 bits (344), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 100/386 (25%), Positives = 186/386 (48%), Gaps = 9/386 (2%)
Query: 48 SVHSEILKSGFLSNTFTLNHLINCYVRLKKTQVARQLFDEMLEPNVVSYTSLMAGYINMG 107
+VH ++K+G + + F N L++ Y A QLFD M E N+VS+ S++ + + G
Sbjct: 208 AVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNG 267
Query: 108 QPQIALLLFQKML----GNLVWPNEFTFATVIKACSMLADLITGKQIHTHIETFGFQYNL 163
+ + LL +M+ P+ T TV+ C+ ++ GK +H L
Sbjct: 268 FSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKEL 327
Query: 164 VVCSSLVDMYGKCNDVDGARRVFDLMGCRNVVSWTSIIVAHAQNAQGHEALEMFREFNYQ 223
V+ ++L+DMY KC + A+ +F + +NVVSW +++ + H ++ R+
Sbjct: 328 VLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAG 387
Query: 224 SRD-RPNQHMLASVINACASLGRLVSGKVAHGVVVRSGCEFNDVVASALVDMYAKCGSVN 282
D + ++ + + + C L S K H ++ +N++VA+A V YAKCGS++
Sbjct: 388 GEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLS 447
Query: 283 YSDKVFNRISNPSVVTYTSMIVGAAKYGLGRFSLDLFNEMISRGIKPNDVTFVGVLHACS 342
Y+ +VF+ I + +V ++ ++I G A+ R SLD +M G+ P+ T +L ACS
Sbjct: 448 YAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACS 507
Query: 343 HSGLVDEGIQHLDSMYRKYGIIPDAKHYTCVVDMLGRTGRLDEAYKLAKSIQVDPDGGPL 402
+ G + + R + + D Y V+ + G L L +++ D +
Sbjct: 508 KLKSLRLGKEVHGFIIRNW-LERDLFVYLSVLSLYIHCGELCTVQALFDAME---DKSLV 563
Query: 403 LWGTLLSASRLHGRVDIAVEASNQLI 428
W T+++ +G D A+ Q++
Sbjct: 564 SWNTVITGYLQNGFPDRALGVFRQMV 589
Score = 122 bits (307), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 82/306 (26%), Positives = 150/306 (49%), Gaps = 7/306 (2%)
Query: 49 VHSEILKSGFLSNTFTL-NHLINCYVRLKKTQVARQLFDEMLEPNVVSYTSLMAGYINMG 107
+H + S L N L +I Y +R +FD + N+ + ++++ Y
Sbjct: 106 IHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNE 165
Query: 108 QPQIALLLFQKMLGNL-VWPNEFTFATVIKACSMLADLITGKQIHTHIETFGFQYNLVVC 166
L F +M+ + P+ FT+ VIKAC+ ++D+ G +H + G ++ V
Sbjct: 166 LYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVG 225
Query: 167 SSLVDMYGKCNDVDGARRVFDLMGCRNVVSWTSIIVAHAQNAQGHEALEMFREFNYQSRD 226
++LV YG V A ++FD+M RN+VSW S+I + N E+ + E ++ D
Sbjct: 226 NALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGD 285
Query: 227 ---RPNQHMLASVINACASLGRLVSGKVAHGVVVRSGCEFNDVVASALVDMYAKCGSVNY 283
P+ L +V+ CA + GK HG V+ + V+ +AL+DMY+KCG +
Sbjct: 286 GAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITN 345
Query: 284 SDKVFNRISNPSVVTYTSMIVGAAKYGLGRFSLDLFNEMISRG--IKPNDVTFVGVLHAC 341
+ +F +N +VV++ +M+ G + G + D+ +M++ G +K ++VT + + C
Sbjct: 346 AQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVC 405
Query: 342 SHSGLV 347
H +
Sbjct: 406 FHESFL 411
Score = 96.3 bits (238), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 74/316 (23%), Positives = 141/316 (44%), Gaps = 9/316 (2%)
Query: 134 VIKACSMLADLITGKQIHTHIE-TFGFQYNLVVCSSLVDMYGKCNDVDGARRVFDLMGCR 192
+++A D+ G++IH + + + + V+C+ ++ MY C D +R VFD + +
Sbjct: 90 LLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSK 149
Query: 193 NVVSWTSIIVAHAQNAQGHEALEMFREFNYQSRDRPNQHMLASVINACASLGRLVSGKVA 252
N+ W ++I ++++N E LE F E + P+ VI ACA + + G
Sbjct: 150 NLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAV 209
Query: 253 HGVVVRSGCEFNDVVASALVDMYAKCGSVNYSDKVFNRISNPSVVTYTSMIVGAAKYGLG 312
HG+VV++G + V +ALV Y G V + ++F+ + ++V++ SMI + G
Sbjct: 210 HGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFS 269
Query: 313 RFSLDLFNEMISR----GIKPNDVTFVGVLHACSHSGLVDEGIQHLDSMYRKYGIIPDAK 368
S L EM+ P+ T V VL C+ + G + + K + +
Sbjct: 270 EESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLG-KGVHGWAVKLRLDKELV 328
Query: 369 HYTCVVDMLGRTGRLDEAYKLAKSIQVDPDGGPLLWGTLLSASRLHGRVDIAVEASNQLI 428
++DM + G + A + K ++ + + W T++ G + Q++
Sbjct: 329 LNNALMDMYSKCGCITNAQMIFK---MNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQML 385
Query: 429 ESNQQVANAYVTLSNT 444
+ V VT+ N
Sbjct: 386 AGGEDVKADEVTILNA 401
>sp|Q9SR82|PP219_ARATH Putative pentatricopeptide repeat-containing protein At3g08820
OS=Arabidopsis thaliana GN=PCMP-H84 PE=3 SV=1
Length = 685
Score = 388 bits (996), Expect = e-107, Method: Compositional matrix adjust.
Identities = 204/557 (36%), Positives = 326/557 (58%), Gaps = 4/557 (0%)
Query: 49 VHSEILKSGFLSNTFTLNHLINCYVRLKKTQVARQLFDEMLEPNVVSYTSLMAGYINMGQ 108
+HS ++K GF + + L++ Y + A +LFDE+ + +VV++T+L +GY G+
Sbjct: 133 LHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGR 192
Query: 109 PQIALLLFQKMLGNLVWPNEFTFATVIKACSMLADLITGKQIHTHIETFGFQYNLVVCSS 168
+ A+ LF+KM+ V P+ + V+ AC + DL +G+ I ++E Q N V ++
Sbjct: 193 HREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTT 252
Query: 169 LVDMYGKCNDVDGARRVFDLMGCRNVVSWTSIIVAHAQNAQGHEALEMFREFNYQSRDRP 228
LV++Y KC ++ AR VFD M +++V+W+++I +A N+ E +E+F + Q +P
Sbjct: 253 LVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQM-LQENLKP 311
Query: 229 NQHMLASVINACASLGRLVSGKVAHGVVVRSGCEFNDVVASALVDMYAKCGSVNYSDKVF 288
+Q + +++CASLG L G+ ++ R N +A+AL+DMYAKCG++ +VF
Sbjct: 312 DQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVF 371
Query: 289 NRISNPSVVTYTSMIVGAAKYGLGRFSLDLFNEMISRGIKPNDVTFVGVLHACSHSGLVD 348
+ +V + I G AK G + S +F + GI P+ TF+G+L C H+GL+
Sbjct: 372 KEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQ 431
Query: 349 EGIQHLDSMYRKYGIIPDAKHYTCVVDMLGRTGRLDEAYKLAKSIQVDPDGGPLLWGTLL 408
+G++ +++ Y + +HY C+VD+ GR G LD+AY+L + + P+ ++WG LL
Sbjct: 432 DGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNA--IVWGALL 489
Query: 409 SASRLHGRVDIAVEASNQLIESNQQVANAYVTLSNTYALAGEWENVHSLRSEMKRTGIHK 468
S RL +A +LI A YV LSN Y++ G W+ +R M + G+ K
Sbjct: 490 SGCRLVKDTQLAETVLKELIALEPWNAGNYVQLSNIYSVGGRWDEAAEVRDMMNKKGMKK 549
Query: 469 EPGCSWVEIRDQTYAFYAGNALFERGSEVLSLLRELERKMKERGYVGGKTGLVFVDVEDE 528
PG SW+E+ + + F A + ++ + L +L +M+ G+V T VF DVE+E
Sbjct: 550 IPGYSWIELEGKVHEFLADDKSHPLSDKIYAKLEDLGNEMRLMGFVP-TTEFVFFDVEEE 608
Query: 529 AREEIVGLHSERLALAFGLISIPKGITIRIMKNLRMCRDCHDVFKLISDIVERDFVVRDV 588
+E ++G HSE+LA+A GLIS G IR++KNLR+C DCH+V KLIS I R+ VVRD
Sbjct: 609 EKERVLGYHSEKLAVALGLISTDHGQVIRVVKNLRVCGDCHEVMKLISKITRREIVVRDN 668
Query: 589 NRFHHFRNGSCSCGDFW 605
NRFH F NGSCSC D+W
Sbjct: 669 NRFHCFTNGSCSCNDYW 685
Score = 155 bits (392), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 91/366 (24%), Positives = 192/366 (52%), Gaps = 9/366 (2%)
Query: 36 QLQECKHLISLA-------SVHSEILKSGFLSNTFTLNHLINCYVRLKKTQVARQLFDEM 88
++Q+ K LIS+A +H ++ +TF +N L+ + ++T+ + LF
Sbjct: 12 KVQQIKTLISVACTVNHLKQIHVSLINHHLHHDTFLVNLLLKRTLFFRQTKYSYLLFSHT 71
Query: 89 LEPNVVSYTSLMAGYINMGQPQIALLLFQKMLGNLVWPNEFTFATVIKACSMLADLITGK 148
PN+ Y SL+ G++N L LF + + ++ + FTF V+KAC+ + G
Sbjct: 72 QFPNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGI 131
Query: 149 QIHTHIETFGFQYNLVVCSSLVDMYGKCNDVDGARRVFDLMGCRNVVSWTSIIVAHAQNA 208
+H+ + GF +++ +SL+ +Y ++ A ++FD + R+VV+WT++ + +
Sbjct: 132 DLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSG 191
Query: 209 QGHEALEMFREFNYQSRDRPNQHMLASVINACASLGRLVSGKVAHGVVVRSGCEFNDVVA 268
+ EA+++F++ + +P+ + + V++AC +G L SG+ + + N V
Sbjct: 192 RHREAIDLFKKM-VEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVR 250
Query: 269 SALVDMYAKCGSVNYSDKVFNRISNPSVVTYTSMIVGAAKYGLGRFSLDLFNEMISRGIK 328
+ LV++YAKCG + + VF+ + +VT+++MI G A + ++LF +M+ +K
Sbjct: 251 TTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLK 310
Query: 329 PNDVTFVGVLHACSHSGLVDEGIQHLDSMYRKYGIIPDAKHYTCVVDMLGRTGRLDEAYK 388
P+ + VG L +C+ G +D G + S+ ++ + + ++DM + G + ++
Sbjct: 311 PDQFSIVGFLSSCASLGALDLGEWGI-SLIDRHEFLTNLFMANALIDMYAKCGAMARGFE 369
Query: 389 LAKSIQ 394
+ K ++
Sbjct: 370 VFKEMK 375
>sp|Q9FND6|PP411_ARATH Pentatricopeptide repeat-containing protein At5g40410,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H15 PE=2
SV=1
Length = 608
Score = 385 bits (990), Expect = e-106, Method: Compositional matrix adjust.
Identities = 201/576 (34%), Positives = 333/576 (57%), Gaps = 7/576 (1%)
Query: 33 FIQQLQECKHLISLASVHSEILKSGFLSNTFTLNHLINCYVRLKKTQVARQLFDEMLEPN 92
I ++ C + +H +++KS + F + L+ CY+RL A +LFDEM E +
Sbjct: 37 LIAAVKSCVSIELCRLLHCKVVKSVSYRHGFIGDQLVGCYLRLGHDVCAEKLFDEMPERD 96
Query: 93 VVSYTSLMAGYINMGQPQIALLLFQKMLGNLVW--PNEFTFATVIKACSMLADLITGKQI 150
+VS+ SL++GY G + +M+ + V PNE TF ++I AC G+ I
Sbjct: 97 LVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSKEEGRCI 156
Query: 151 HTHIETFGFQYNLVVCSSLVDMYGKCNDVDGARRVFDLMGCRNVVSWTSIIVAHAQNAQG 210
H + FG + V ++ ++ YGK D+ + ++F+ + +N+VSW ++IV H QN
Sbjct: 157 HGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIHLQNGLA 216
Query: 211 HEALEMFREFNYQSRDRPNQHMLASVINACASLGRLVSGKVAHGVVVRSGCEFNDVVASA 270
+ L F + + P+Q +V+ +C +G + + HG+++ G N + +A
Sbjct: 217 EKGLAYF-NMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKCITTA 275
Query: 271 LVDMYAKCGSVNYSDKVFNRISNPSVVTYTSMIVGAAKYGLGRFSLDLFNEMISRGIKPN 330
L+D+Y+K G + S VF+ I++P + +T+M+ A +G GR ++ F M+ GI P+
Sbjct: 276 LLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGRDAIKHFELMVHYGISPD 335
Query: 331 DVTFVGVLHACSHSGLVDEGIQHLDSMYRKYGIIPDAKHYTCVVDMLGRTGRLDEAYKLA 390
VTF +L+ACSHSGLV+EG + ++M ++Y I P HY+C+VD+LGR+G L +AY L
Sbjct: 336 HVTFTHLLNACSHSGLVEEGKHYFETMSKRYRIDPRLDHYSCMVDLLGRSGLLQDAYGLI 395
Query: 391 KSIQVDPDGGPLLWGTLLSASRLHGRVDIAVEASNQLIESNQQVANAYVTLSNTYALAGE 450
K + ++P G +WG LL A R++ + +A+ +L E + YV LSN Y+ +G
Sbjct: 396 KEMPMEPSSG--VWGALLGACRVYKDTQLGTKAAERLFELEPRDGRNYVMLSNIYSASGL 453
Query: 451 WENVHSLRSEMKRTGIHKEPGCSWVEIRDQTYAFYAGNALFERGSEVLSLLRELERKMK- 509
W++ +R+ MK+ G+ + GCS++E ++ + F G+ ++ L+E+ +KMK
Sbjct: 454 WKDASRIRNLMKQKGLVRASGCSYIEHGNKIHKFVVGDWSHPESEKIQKKLKEIRKKMKS 513
Query: 510 ERGYVGGKTGLVFVDVEDEAREEIVGLHSERLALAFGLISIPKGITIRIMKNLRMCRDCH 569
E GY KT V DV ++ +EE++ HSE++A+AFGL+ + I I KNLR+C DCH
Sbjct: 514 EMGY-KSKTEFVLHDVGEDVKEEMINQHSEKIAMAFGLLVVSPMEPIIIRKNLRICGDCH 572
Query: 570 DVFKLISDIVERDFVVRDVNRFHHFRNGSCSCGDFW 605
+ K IS I +R ++RD RFHHF +GSCSC D+W
Sbjct: 573 ETAKAISLIEKRRIIIRDSKRFHHFLDGSCSCSDYW 608
>sp|A8MQA3|PP330_ARATH Pentatricopeptide repeat-containing protein At4g21065
OS=Arabidopsis thaliana GN=PCMP-H28 PE=2 SV=2
Length = 595
Score = 384 bits (987), Expect = e-106, Method: Compositional matrix adjust.
Identities = 207/570 (36%), Positives = 341/570 (59%), Gaps = 11/570 (1%)
Query: 43 LISLASVHSEILKSGF-LSNTFTLNHLINCYVRLKKT---QVARQLFDEMLEP-NVVSYT 97
+ L +H+ ++ G +S+ HLI V L A ++F ++ +P NV +
Sbjct: 30 ITKLRQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSYAHKVFSKIEKPINVFIWN 89
Query: 98 SLMAGYINMGQPQIALLLFQKM-LGNLVWPNEFTFATVIKACSMLADLITGKQIHTHIET 156
+L+ GY +G A L+++M + LV P+ T+ +IKA + +AD+ G+ IH+ +
Sbjct: 90 TLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVVIR 149
Query: 157 FGFQYNLVVCSSLVDMYGKCNDVDGARRVFDLMGCRNVVSWTSIIVAHAQNAQGHEALEM 216
GF + V +SL+ +Y C DV A +VFD M +++V+W S+I A+N + EAL +
Sbjct: 150 SGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALAL 209
Query: 217 FREFNYQSRDRPNQHMLASVINACASLGRLVSGKVAHGVVVRSGCEFNDVVASALVDMYA 276
+ E N + +P+ + S+++ACA +G L GK H +++ G N ++ L+D+YA
Sbjct: 210 YTEMNSKG-IKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYA 268
Query: 277 KCGSVNYSDKVFNRISNPSVVTYTSMIVGAAKYGLGRFSLDLFNEMIS-RGIKPNDVTFV 335
+CG V + +F+ + + + V++TS+IVG A G G+ +++LF M S G+ P ++TFV
Sbjct: 269 RCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFV 328
Query: 336 GVLHACSHSGLVDEGIQHLDSMYRKYGIIPDAKHYTCVVDMLGRTGRLDEAYKLAKSIQV 395
G+L+ACSH G+V EG ++ M +Y I P +H+ C+VD+L R G++ +AY+ KS+ +
Sbjct: 329 GILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPM 388
Query: 396 DPDGGPLLWGTLLSASRLHGRVDIAVEASNQLIESNQQVANAYVTLSNTYALAGEWENVH 455
P+ ++W TLL A +HG D+A A Q+++ + YV LSN YA W +V
Sbjct: 389 QPN--VVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQ 446
Query: 456 SLRSEMKRTGIHKEPGCSWVEIRDQTYAFYAGNALFERGSEVLSLLRELERKMKERGYVG 515
+R +M R G+ K PG S VE+ ++ + F G+ + + + L+E+ +++ GYV
Sbjct: 447 KIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTGRLRSEGYVP 506
Query: 516 GKTGLVFVDVEDEAREEIVGLHSERLALAFGLISIPKGITIRIMKNLRMCRDCHDVFKLI 575
+ V+VDVE+E +E V HSE++A+AF LIS P+ I ++KNLR+C DCH KL+
Sbjct: 507 -QISNVYVDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITVVKNLRVCADCHLAIKLV 565
Query: 576 SDIVERDFVVRDVNRFHHFRNGSCSCGDFW 605
S + R+ VVRD +RFHHF+NGSCSC D+W
Sbjct: 566 SKVYNREIVVRDRSRFHHFKNGSCSCQDYW 595
Score = 130 bits (327), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 82/307 (26%), Positives = 156/307 (50%), Gaps = 9/307 (2%)
Query: 12 TLAASSLTRQNKRS-----SCHTKAHFIQQLQECKHLISLASVHSEILKSGFLSNTFTLN 66
+++A SL R+ + S HT I+ + + ++HS +++SGF S + N
Sbjct: 101 SISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVVIRSGFGSLIYVQN 160
Query: 67 HLINCYVRLKKTQVARQLFDEMLEPNVVSYTSLMAGYINMGQPQIALLLFQKMLGNLVWP 126
L++ Y A ++FD+M E ++V++ S++ G+ G+P+ AL L+ +M + P
Sbjct: 161 SLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKP 220
Query: 127 NEFTFATVIKACSMLADLITGKQIHTHIETFGFQYNLVVCSSLVDMYGKCNDVDGARRVF 186
+ FT +++ AC+ + L GK++H ++ G NL + L+D+Y +C V+ A+ +F
Sbjct: 221 DGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLF 280
Query: 187 DLMGCRNVVSWTSIIVAHAQNAQGHEALEMFREFNYQSRDRPNQHMLASVINACASLGRL 246
D M +N VSWTS+IV A N G EA+E+F+ P + ++ AC+ G +
Sbjct: 281 DEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMV 340
Query: 247 VSGKVAHGVVVRSGCEFNDVVA--SALVDMYAKCGSVNYSDKVFNRIS-NPSVVTYTSMI 303
G + +R + + +VD+ A+ G V + + + P+VV + +++
Sbjct: 341 KEG-FEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLL 399
Query: 304 VGAAKYG 310
+G
Sbjct: 400 GACTVHG 406
>sp|Q56XI1|PPR25_ARATH Pentatricopeptide repeat-containing protein At1g09410
OS=Arabidopsis thaliana GN=PCMP-H18 PE=2 SV=2
Length = 705
Score = 383 bits (983), Expect = e-105, Method: Compositional matrix adjust.
Identities = 211/532 (39%), Positives = 315/532 (59%), Gaps = 24/532 (4%)
Query: 81 ARQLFDEMLEPNVVSYTSLMAGYINMGQPQIALLLFQKMLGNLVWPNEFTFATVIKACSM 140
AR++FDEM E +V+++T+++ GY + A +F M P + T + SM
Sbjct: 191 AREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVM------PEK----TEVSWTSM 240
Query: 141 LADLITGKQIHTHIETFGFQ--YNLVVCSSLVDMYGKCNDVDGARRVFDLMGCRNVVSWT 198
L + +I E F ++ C++++ G+ ++ ARRVFD M RN SW
Sbjct: 241 LMGYVQNGRIEDAEELFEVMPVKPVIACNAMISGLGQKGEIAKARRVFDSMKERNDASWQ 300
Query: 199 SIIVAHAQNAQGHEALEMFREFNYQSRDRPNQHMLASVINACASLGRLVSGKVAHGVVVR 258
++I H +N EAL++F Q RP L S+++ CASL L GK H +VR
Sbjct: 301 TVIKIHERNGFELEALDLFILMQKQGV-RPTFPTLISILSVCASLASLHHGKQVHAQLVR 359
Query: 259 SGCEFN-DV-VASALVDMYAKCGSVNYSDKVFNRISNPSVVTYTSMIVGAAKYGLGRFSL 316
C+F+ DV VAS L+ MY KCG + S +F+R + ++ + S+I G A +GLG +L
Sbjct: 360 --CQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEAL 417
Query: 317 DLFNEM-ISRGIKPNDVTFVGVLHACSHSGLVDEGIQHLDSMYRKYGIIPDAKHYTCVVD 375
+F EM +S KPN+VTFV L ACS++G+V+EG++ +SM +G+ P HY C+VD
Sbjct: 418 KVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKPITAHYACMVD 477
Query: 376 MLGRTGRLDEAYKLAKSIQVDPDGGPLLWGTLLSASRLHGRVDIAVEASNQLIESNQQVA 435
MLGR GR +EA ++ S+ V+PD +WG+LL A R H ++D+A + +LIE + +
Sbjct: 478 MLGRAGRFNEAMEMIDSMTVEPDAA--VWGSLLGACRTHSQLDVAEFCAKKLIEIEPENS 535
Query: 436 NAYVTLSNTYALAGEWENVHSLRSEMKRTGIHKEPGCSWVEIRDQTYAFYAG--NALFER 493
Y+ LSN YA G W +V LR MK + K PGCSW E+ ++ +AF G N+ E+
Sbjct: 536 GTYILLSNMYASQGRWADVAELRKLMKTRLVRKSPGCSWTEVENKVHAFTRGGINSHPEQ 595
Query: 494 GSEVLSLLRELERKMKERGYVGGKTGLVFVDVEDEAREEIVGLHSERLALAFGLISIPKG 553
S +L +L EL+ ++E GY DV++E + + HSERLA+A+ L+ + +G
Sbjct: 596 ES-ILKILDELDGLLREAGY-NPDCSYALHDVDEEEKVNSLKYHSERLAVAYALLKLSEG 653
Query: 554 ITIRIMKNLRMCRDCHDVFKLISDIVERDFVVRDVNRFHHFRNGSCSCGDFW 605
I IR+MKNLR+C DCH K+IS + ER+ ++RD NRFHHFRNG CSC D+W
Sbjct: 654 IPIRVMKNLRVCSDCHTAIKIISKVKEREIILRDANRFHHFRNGECSCKDYW 705
Score = 90.9 bits (224), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 84/383 (21%), Positives = 167/383 (43%), Gaps = 77/383 (20%)
Query: 61 NTFTLNHLINCYVRLKKTQVARQLFDEMLEPNVVSYTSLMAGYINMGQPQIALLLFQKML 120
N + N L++ Y++ + AR++FD M E NVVS+T+L+ GY++ G+ +A LF KM
Sbjct: 78 NIISWNGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMP 137
Query: 121 GNLVWPNEFTFATVI----------KAC---------------SMLADLITGKQIHTHIE 155
N+ ++ ++ AC SM+ L ++ E
Sbjct: 138 EK----NKVSWTVMLIGFLQDGRIDDACKLYEMIPDKDNIARTSMIHGLCKEGRVDEARE 193
Query: 156 TFG--FQYNLVVCSSLVDMYGKCNDVDGARRVFDLMGCRNVVSWTSIIVAHAQNAQGHEA 213
F + +++ +++V YG+ N VD AR++FD+M + VSWTS+++ + QN + +A
Sbjct: 194 IFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVMPEKTEVSWTSMLMGYVQNGRIEDA 253
Query: 214 LEMFREFNYQSRDRPNQHMLASVINACASLGRLVSGKVAHGVVVRSGCEFNDVVASALVD 273
E+F + M + AC +A++
Sbjct: 254 EELF------------EVMPVKPVIAC----------------------------NAMIS 273
Query: 274 MYAKCGSVNYSDKVFNRISNPSVVTYTSMIVGAAKYGLGRFSLDLFNEMISRGIKPNDVT 333
+ G + + +VF+ + + ++ ++I + G +LDLF M +G++P T
Sbjct: 274 GLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPT 333
Query: 334 FVGVLHACSHSGLVDEGIQ-HLDSMYRKYGIIPDAKHYTCVVDMLGRTGRLDEAYKLAKS 392
+ +L C+ + G Q H + ++ + D + ++ M + G L ++ +
Sbjct: 334 LISILSVCASLASLHHGKQVHAQLVRCQFDV--DVYVASVLMTMYIKCGELVKSKLIFDR 391
Query: 393 IQVDPDGGPLLWGTLLSASRLHG 415
P ++W +++S HG
Sbjct: 392 F---PSKDIIMWNSIISGYASHG 411
Score = 85.5 bits (210), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 93/412 (22%), Positives = 180/412 (43%), Gaps = 69/412 (16%)
Query: 49 VHSEILKSGFLSNTF---TLNHLINCYVRLKKTQVARQLFDEMLEPNVVSYTSLMAGYIN 105
+ S+IL S T T N I R+ K AR+LFD ++ S+ S++AGY
Sbjct: 1 MKSQILLRRTYSTTIPPPTANVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFA 60
Query: 106 MGQPQIALLLFQKMLGNLVWPNEFTFATVIKACSMLADLITGKQIHTHIETFGFQYNLVV 165
P+ A LF +M P+ N++
Sbjct: 61 NLMPRDARKLFDEM------PDR---------------------------------NIIS 81
Query: 166 CSSLVDMYGKCNDVDGARRVFDLMGCRNVVSWTSIIVAHAQNAQGHEALEMFREFNYQSR 225
+ LV Y K ++D AR+VFDLM RNVVSWT+++ + N + A +F +
Sbjct: 82 WNGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKM----- 136
Query: 226 DRPNQHMLASVINACASLGRLVSGKVAHGVVVRSGCEFNDVVA-SALVDMYAKCGSVNYS 284
P ++ ++ + +G L G++ + D +A ++++ K G V+ +
Sbjct: 137 --PEKNKVSWTV---MLIGFLQDGRIDDACKLYEMIPDKDNIARTSMIHGLCKEGRVDEA 191
Query: 285 DKVFNRISNPSVVTYTSMIVGAAKYGLGRFSLDLFNEMISRGIKPNDVTFVGVLHACSHS 344
++F+ +S SV+T+T+M+ G + + +F+ M + +V++ +L +
Sbjct: 192 REIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVMPEK----TEVSWTSMLMGYVQN 247
Query: 345 GLVDEGIQHLDSMYRKYGIIPDAKHYTCVVDMLGRTGRLDEAYKLAKSIQVDPDGGPLLW 404
G +++ + + M K I +A ++ LG+ G + +A ++ S++ D W
Sbjct: 248 GRIEDAEELFEVMPVKPVIACNA-----MISGLGQKGEIAKARRVFDSMKERNDAS---W 299
Query: 405 GTLLSASRLHGRVDIAVEASNQLIESNQQ-VANAYVTLSNTYALAGEWENVH 455
T++ ++H R +EA + I +Q V + TL + ++ ++H
Sbjct: 300 QTVI---KIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLH 348
Score = 64.7 bits (156), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 95/198 (47%), Gaps = 9/198 (4%)
Query: 18 LTRQNKRSSCHTKAHFIQQLQECKHLISL---ASVHSEILKSGFLSNTFTLNHLINCYVR 74
+ +Q R + T I L C L SL VH+++++ F + + + L+ Y++
Sbjct: 322 MQKQGVRPTFPT---LISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIK 378
Query: 75 LKKTQVARQLFDEMLEPNVVSYTSLMAGYINMGQPQIALLLFQKM-LGNLVWPNEFTFAT 133
+ ++ +FD +++ + S+++GY + G + AL +F +M L PNE TF
Sbjct: 379 CGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVA 438
Query: 134 VIKACSMLADLITGKQIHTHIET-FGFQYNLVVCSSLVDMYGKCNDVDGARRVFDLMGCR 192
+ ACS + G +I+ +E+ FG + + +VDM G+ + A + D M
Sbjct: 439 TLSACSYAGMVEEGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVE 498
Query: 193 -NVVSWTSIIVAHAQNAQ 209
+ W S++ A ++Q
Sbjct: 499 PDAAVWGSLLGACRTHSQ 516
>sp|Q9FI80|PP425_ARATH Pentatricopeptide repeat-containing protein At5g48910
OS=Arabidopsis thaliana GN=PCMP-H38 PE=2 SV=1
Length = 646
Score = 381 bits (979), Expect = e-105, Method: Compositional matrix adjust.
Identities = 216/622 (34%), Positives = 336/622 (54%), Gaps = 56/622 (9%)
Query: 36 QLQECKHLISLASVHSEILKSGFLSNTFTLNHLI----NCYVRLKKTQVARQLFDEMLEP 91
Q+ C+ + L+ +H+ +KSG + +T ++ + + A ++F++M +
Sbjct: 29 QINNCRTIRDLSQIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMPQR 88
Query: 92 NVVSYTSLMAGYINMGQPQ--IALLLFQKMLGN-LVWPNEFTFATVIKACSMLADLITGK 148
N S+ +++ G+ + + IA+ LF +M+ + V PN FTF +V+KAC+ + GK
Sbjct: 89 NCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGK 148
Query: 149 QIHTHIETFGFQYNLVVCSSLVDMYGKCN------------------------------- 177
QIH +GF + V S+LV MY C
Sbjct: 149 QIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEI 208
Query: 178 --------------DVDGARRVFDLMGCRNVVSWTSIIVAHAQNAQGHEALEMFREFNYQ 223
D AR +FD M R+VVSW ++I ++ N +A+E+FRE +
Sbjct: 209 VLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMK-K 267
Query: 224 SRDRPNQHMLASVINACASLGRLVSGKVAHGVVVRSGCEFNDVVASALVDMYAKCGSVNY 283
RPN L SV+ A + LG L G+ H SG +DV+ SAL+DMY+KCG +
Sbjct: 268 GDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEK 327
Query: 284 SDKVFNRISNPSVVTYTSMIVGAAKYGLGRFSLDLFNEMISRGIKPNDVTFVGVLHACSH 343
+ VF R+ +V+T+++MI G A +G ++D F +M G++P+DV ++ +L ACSH
Sbjct: 328 AIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSH 387
Query: 344 SGLVDEGIQHLDSMYRKYGIIPDAKHYTCVVDMLGRTGRLDEAYKLAKSIQVDPDGGPLL 403
GLV+EG ++ M G+ P +HY C+VD+LGR+G LDEA + ++ + PD ++
Sbjct: 388 GGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDD--VI 445
Query: 404 WGTLLSASRLHGRVDIAVEASNQLIESNQQVANAYVTLSNTYALAGEWENVHSLRSEMKR 463
W LL A R+ G V++ +N L++ + AYV LSN YA G W V +R MK
Sbjct: 446 WKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKE 505
Query: 464 TGIHKEPGCSWVEIRDQTYAFYAGNALFERGSEVLSLLRELERKMKERGYVGGKTGLVFV 523
I K+PGCS ++I + F + + E+ S+L E+ K++ GY T V +
Sbjct: 506 KDIRKDPGCSLIDIDGVLHEFVVEDDSHPKAKEINSMLVEISDKLRLAGYRPITTQ-VLL 564
Query: 524 DVEDEAREEIVGLHSERLALAFGLISIPKGITIRIMKNLRMCRDCHDVFKLISDIVERDF 583
++E+E +E ++ HSE++A AFGLIS G IRI+KNLR+C DCH KLIS + +R
Sbjct: 565 NLEEEDKENVLHYHSEKIATAFGLISTSPGKPIRIVKNLRICEDCHSSIKLISKVYKRKI 624
Query: 584 VVRDVNRFHHFRNGSCSCGDFW 605
VRD RFHHF++GSCSC D+W
Sbjct: 625 TVRDRKRFHHFQDGSCSCMDYW 646
>sp|Q5G1T1|PP272_ARATH Pentatricopeptide repeat-containing protein At3g49170,
chloroplastic OS=Arabidopsis thaliana GN=EMB2261 PE=2
SV=1
Length = 850
Score = 379 bits (972), Expect = e-104, Method: Compositional matrix adjust.
Identities = 207/578 (35%), Positives = 335/578 (57%), Gaps = 18/578 (3%)
Query: 40 CKHLISLA---SVHSEILKSGFLSNTFTLNHLINCYVRLK---KTQVARQLFDEMLEPNV 93
C L +L+ +HS ++SG + + L++ Y + R++FD M + +V
Sbjct: 279 CAELENLSLGKQLHSWAIRSGLVDDVEC--SLVDMYAKCSADGSVDDCRKVFDRMEDHSV 336
Query: 94 VSYTSLMAGYI-NMGQPQIALLLFQKMLGN-LVWPNEFTFATVIKACSMLADLITGKQIH 151
+S+T+L+ GY+ N A+ LF +M+ V PN FTF++ KAC L+D GKQ+
Sbjct: 337 MSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVL 396
Query: 152 THIETFGFQYNLVVCSSLVDMYGKCNDVDGARRVFDLMGCRNVVSWTSIIVAHAQNAQGH 211
G N V +S++ M+ K + ++ A+R F+ + +N+VS+ + + +N
Sbjct: 397 GQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFE 456
Query: 212 EALEMFREFNYQSRDRPNQHMLASVINACASLGRLVSGKVAHGVVVRSGCEFNDVVASAL 271
+A ++ E + + AS+++ A++G + G+ H VV+ G N V +AL
Sbjct: 457 QAFKLLSEITERELG-VSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNAL 515
Query: 272 VDMYAKCGSVNYSDKVFNRISNPSVVTYTSMIVGAAKYGLGRFSLDLFNEMISRGIKPND 331
+ MY+KCGS++ + +VFN + N +V+++TSMI G AK+G L+ FN+MI G+KPN+
Sbjct: 516 ISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNE 575
Query: 332 VTFVGVLHACSHSGLVDEGIQHLDSMYRKYGIIPDAKHYTCVVDMLGRTGRLDEAYKLAK 391
VT+V +L ACSH GLV EG +H +SMY + I P +HY C+VD+L R G L +A++
Sbjct: 576 VTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFIN 635
Query: 392 SIQVDPDGGPLLWGTLLSASRLHGRVDIAVEASNQLIESNQQVANAYVTLSNTYALAGEW 451
++ D L+W T L A R+H ++ A+ +++E + AY+ LSN YA AG+W
Sbjct: 636 TMPFQAD--VLVWRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACAGKW 693
Query: 452 ENVHSLRSEMKRTGIHKEPGCSWVEIRDQTYAFYAGNALFERGSEVLSLLRELERKMKER 511
E +R +MK + KE GCSW+E+ D+ + FY G+ ++ L L ++K
Sbjct: 694 EESTEMRRKMKERNLVKEGGCSWIEVGDKIHKFYVGDTAHPNAHQIYDELDRLITEIKRC 753
Query: 512 GYVGGKTGLVF----VDVEDEAREEIVGLHSERLALAFGLISIPKGITIRIMKNLRMCRD 567
GYV T LV + ++ +E ++ HSE++A+AFGLIS K +R+ KNLR+C D
Sbjct: 754 GYV-PDTDLVLHKLEEENDEAEKERLLYQHSEKIAVAFGLISTSKSRPVRVFKNLRVCGD 812
Query: 568 CHDVFKLISDIVERDFVVRDVNRFHHFRNGSCSCGDFW 605
CH+ K IS + R+ V+RD+NRFHHF++G CSC D+W
Sbjct: 813 CHNAMKYISTVSGREIVLRDLNRFHHFKDGKCSCNDYW 850
Score = 151 bits (381), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 112/355 (31%), Positives = 193/355 (54%), Gaps = 14/355 (3%)
Query: 49 VHSEILKSGFLSNTFTLNHLINCYVRLKKTQVARQLFDEML---EPNVVSYTSLMAGYIN 105
VH+ +++ ++ N LI+ Y + + A +F+ M + +VVS++++MA Y N
Sbjct: 84 VHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGN 143
Query: 106 MGQPQIALLLFQKMLGNLVWPNEFTFATVIKACSMLADLITGK-QIHTHIETFGFQYNLV 164
G+ A+ +F + L + PN++ + VI+ACS + G+ + ++T F+ ++
Sbjct: 144 NGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVC 203
Query: 165 VCSSLVDMYGKC-NDVDGARRVFDLMGCRNVVSWTSIIVAHAQNAQGHEALEMFREFNYQ 223
V SL+DM+ K N + A +VFD M NVV+WT +I Q EA+ F +
Sbjct: 204 VGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDM-VL 262
Query: 224 SRDRPNQHMLASVINACASLGRLVSGKVAHGVVVRSGCEFNDVVASALVDMYAKC---GS 280
S ++ L+SV +ACA L L GK H +RSG D V +LVDMYAKC GS
Sbjct: 263 SGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSG--LVDDVECSLVDMYAKCSADGS 320
Query: 281 VNYSDKVFNRISNPSVVTYTSMIVGAAKY-GLGRFSLDLFNEMISRG-IKPNDVTFVGVL 338
V+ KVF+R+ + SV+++T++I G K L +++LF+EMI++G ++PN TF
Sbjct: 321 VDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAF 380
Query: 339 HACSHSGLVDEGIQHLDSMYRKYGIIPDAKHYTCVVDMLGRTGRLDEAYKLAKSI 393
AC + G Q L +++ G+ ++ V+ M ++ R+++A + +S+
Sbjct: 381 KACGNLSDPRVGKQVLGQAFKR-GLASNSSVANSVISMFVKSDRMEDAQRAFESL 434
Score = 148 bits (374), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 112/423 (26%), Positives = 210/423 (49%), Gaps = 21/423 (4%)
Query: 53 ILKSG-FLSNTFTLNHLINCYVRLKKT-QVARQLFDEMLEPNVVSYTSLMAGYINMGQPQ 110
++K+G F S+ LI+ +V+ + + + A ++FD+M E NVV++T ++ + MG P+
Sbjct: 192 LMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPR 251
Query: 111 IALLLFQKMLGNLVWPNEFTFATVIKACSMLADLITGKQIHTHIETFGFQYNLV--VCSS 168
A+ F M+ + ++FT ++V AC+ L +L GKQ+H ++ + LV V S
Sbjct: 252 EAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLH----SWAIRSGLVDDVECS 307
Query: 169 LVDMYGKCN---DVDGARRVFDLMGCRNVVSWTSIIVAHAQNAQ-GHEALEMFREFNYQS 224
LVDMY KC+ VD R+VFD M +V+SWT++I + +N EA+ +F E Q
Sbjct: 308 LVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQG 367
Query: 225 RDRPNQHMLASVINACASLGRLVSGKVAHGVVVRSGCEFNDVVASALVDMYAKCGSVNYS 284
PN +S AC +L GK G + G N VA++++ M+ K + +
Sbjct: 368 HVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDA 427
Query: 285 DKVFNRISNPSVVTYTSMIVGAAKYGLGRFSLDLFNEMISRGIKPNDVTFVGVLHACSHS 344
+ F +S ++V+Y + + G + + L +E+ R + + TF +L ++
Sbjct: 428 QRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANV 487
Query: 345 GLVDEGIQHLDSMYRKYGIIPDAKHYTCVVDMLGRTGRLDEAYKLAKSIQVDPDGGPLLW 404
G + +G + + S K G+ + ++ M + G +D A ++ ++ + + W
Sbjct: 488 GSIRKG-EQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFME---NRNVISW 543
Query: 405 GTLLSASRLHGRVDIAVEASNQLIE----SNQQVANAYVTLSNTYALAGE-WENVHSLRS 459
++++ HG +E NQ+IE N+ A ++ + L E W + +S+
Sbjct: 544 TSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYE 603
Query: 460 EMK 462
+ K
Sbjct: 604 DHK 606
Score = 117 bits (292), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 98/362 (27%), Positives = 180/362 (49%), Gaps = 20/362 (5%)
Query: 99 LMAGYINMGQPQIALLLFQKMLGNLVWP-NEFTFATVIKACSMLADLITGKQIHTHIETF 157
L+ ++N G + A+ M + + P + TF++++K+C D GK +H + F
Sbjct: 32 LILRHLNAGDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEF 91
Query: 158 GFQYNLVVCSSLVDMYGKCNDVDGARRVFDLM---GCRNVVSWTSIIVAHAQNAQGHEAL 214
+ + V+ +SL+ +Y K D A VF+ M G R+VVSW++++ + N + +A+
Sbjct: 92 DIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAI 151
Query: 215 EMFREFNYQSRDRPNQHMLASVINACASLGRLVSGKVAHGVVVRSGCEFNDV-VASALVD 273
++F EF + PN + +VI AC++ + G+V G ++++G +DV V +L+D
Sbjct: 152 KVFVEF-LELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLID 210
Query: 274 MYAKC-GSVNYSDKVFNRISNPSVVTYTSMIVGAAKYGLGRFSLDLFNEMISRGIKPNDV 332
M+ K S + KVF+++S +VVT+T MI + G R ++ F +M+ G + +
Sbjct: 211 MFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKF 270
Query: 333 TFVGVLHACSHSGLVDEGIQHLDSMYRKYGIIPDAKHYTCVVDMLGRT---GRLDEAYKL 389
T V AC+ + G Q L S + G++ D + +VDM + G +D+ K+
Sbjct: 271 TLSSVFSACAELENLSLGKQ-LHSWAIRSGLVDDVE--CSLVDMYAKCSADGSVDDCRKV 327
Query: 390 AKSIQVDPDGGPLLWGTLLSASRLHGRVDIAVEASNQLIESNQQ--VANAYVTLSNTYAL 447
++ D + W L++ ++A EA N E Q V + T S+ +
Sbjct: 328 FDRME---DHSVMSWTALITG--YMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKA 382
Query: 448 AG 449
G
Sbjct: 383 CG 384
Score = 64.3 bits (155), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 106/243 (43%), Gaps = 11/243 (4%)
Query: 7 RNLIFTLAASSLTRQNKRS---SCHTKAHFIQQLQECKHLISLASVHSEILKSGFLSNTF 63
RNL F A L+ +R S T A + + + +HS+++K G N
Sbjct: 451 RNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQP 510
Query: 64 TLNHLINCYVRLKKTQVARQLFDEMLEPNVVSYTSLMAGYINMGQPQIALLLFQKMLGNL 123
N LI+ Y + A ++F+ M NV+S+TS++ G+ G L F +M+
Sbjct: 511 VCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEG 570
Query: 124 VWPNEFTFATVIKACSMLADLITG-KQIHTHIETFGFQYNLVVCSSLVDMYGKCNDVDGA 182
V PNE T+ ++ ACS + + G + ++ E + + + +VD+ + + A
Sbjct: 571 VKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDA 630
Query: 183 RRVFDLMGCR-NVVSWTSIIVA---HAQNAQGHEALEMFREFNYQSRDRPNQHMLASVIN 238
+ M + +V+ W + + A H+ G A E + + P ++ S I
Sbjct: 631 FEFINTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILELD---PNEPAAYIQLSNIY 687
Query: 239 ACA 241
ACA
Sbjct: 688 ACA 690
>sp|Q9ZVF4|PP140_ARATH Pentatricopeptide repeat-containing protein At2g01510,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H37 PE=3
SV=1
Length = 584
Score = 378 bits (971), Expect = e-104, Method: Compositional matrix adjust.
Identities = 206/562 (36%), Positives = 323/562 (57%), Gaps = 6/562 (1%)
Query: 46 LASVHSEILKSGFLSNTFTLNHLINCYVRLKKTQVARQLFDEMLEPNVVSYTSLMAGYIN 105
L +H+ +L++GF L L+ V + ARQ+FDEM +P + + +L GY+
Sbjct: 27 LKKIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFDEMHKPRIFLWNTLFKGYVR 86
Query: 106 MGQPQIALLLFQKMLGNLVWPNEFTFATVIKACSMLADLITGKQIHTHIETFGFQYNLVV 165
P +LLL++KM V P+EFT+ V+KA S L D G +H H+ +GF +V
Sbjct: 87 NQLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGFGCLGIV 146
Query: 166 CSSLVDMYGKCNDVDGARRVFDLMGCRNVVSWTSIIVAHAQNAQGHEALEMFREFNYQSR 225
+ LV MY K ++ A +F+ M +++V+W + + Q ALE F + +
Sbjct: 147 ATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCADAV 206
Query: 226 DRPNQHMLASVINACASLGRLVSGKVAHGVVVRSGCEFNDVVASALVDMYAKCGSVNYSD 285
+ + + S+++AC LG L G+ + + + N +V +A +DM+ KCG+ +
Sbjct: 207 -QFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAAR 265
Query: 286 KVFNRISNPSVVTYTSMIVGAAKYGLGRFSLDLFNEMISRGIKPNDVTFVGVLHACSHSG 345
+F + +VV++++MIVG A G R +L LF M + G++PN VTF+GVL ACSH+G
Sbjct: 266 VLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSACSHAG 325
Query: 346 LVDEGIQHLDSMYRK--YGIIPDAKHYTCVVDMLGRTGRLDEAYKLAKSIQVDPDGGPLL 403
LV+EG ++ M + + P +HY C+VD+LGR+G L+EAY+ K + V+PD G +
Sbjct: 326 LVNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPVEPDTG--I 383
Query: 404 WGTLLSASRLHGRVDIAVEASNQLIESNQQVANAYVTLSNTYALAGEWENVHSLRSEMKR 463
WG LL A +H + + + ++ L+E+ + + +V LSN YA AG+W+ V +RS+M++
Sbjct: 384 WGALLGACAVHRDMILGQKVADVLVETAPDIGSYHVLLSNIYAAAGKWDCVDKVRSKMRK 443
Query: 464 TGIHKEPGCSWVEIRDQTYAFYAGNALFERGSEVLSLLRELERKMKERGYVGGKTGLVFV 523
G K S VE + + F G+ + + L E+ +K+++ GYV T VF
Sbjct: 444 LGTKKVAAYSSVEFEGKIHFFNRGDKSHPQSKAIYEKLDEILKKIRKMGYV-PDTCSVFH 502
Query: 524 DVEDEAREEIVGLHSERLALAFGLISIPKGITIRIMKNLRMCRDCHDVFKLISDIVERDF 583
DVE E +E + HSE+LA+AFGLI G IR+MKNLR C DCH K +S + +
Sbjct: 503 DVEMEEKECSLSHHSEKLAIAFGLIKGRPGHPIRVMKNLRTCDDCHAFSKFVSSLTSTEI 562
Query: 584 VVRDVNRFHHFRNGSCSCGDFW 605
++RD NRFHHFRNG CSC +FW
Sbjct: 563 IMRDKNRFHHFRNGVCSCKEFW 584
>sp|Q9FXB9|PPR84_ARATH Pentatricopeptide repeat-containing protein At1g56690,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H69 PE=2
SV=1
Length = 704
Score = 377 bits (968), Expect = e-103, Method: Compositional matrix adjust.
Identities = 201/545 (36%), Positives = 318/545 (58%), Gaps = 21/545 (3%)
Query: 66 NHLINCYVRLKKTQVARQLFDEMLEPNVVSYTSLMAGYINMGQPQIALLLFQKMLGNLVW 125
++I R + AR +FDEM E NVV++T+++ GY + +A LF+ M
Sbjct: 176 TNMIGGLCREGRVDEARLIFDEMRERNVVTWTTMITGYRQNNRVDVARKLFEVM------ 229
Query: 126 PNEFTFATVIKACSMLADLITGKQIHTHIETFGFQ--YNLVVCSSLVDMYGKCNDVDGAR 183
P + T + SML +I E F ++ C++++ +G+ ++ AR
Sbjct: 230 PEK----TEVSWTSMLLGYTLSGRIEDAEEFFEVMPMKPVIACNAMIVGFGEVGEISKAR 285
Query: 184 RVFDLMGCRNVVSWTSIIVAHAQNAQGHEALEMFREFNYQSRDRPNQHMLASVINACASL 243
RVFDLM R+ +W +I A+ + EAL++F + Q RP+ L S+++ CA+L
Sbjct: 286 RVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGV-RPSFPSLISILSVCATL 344
Query: 244 GRLVSGKVAHGVVVRSGCEFND--VVASALVDMYAKCGSVNYSDKVFNRISNPSVVTYTS 301
L G+ H +VR C+F+D VAS L+ MY KCG + + VF+R S+ ++ + S
Sbjct: 345 ASLQYGRQVHAHLVR--CQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNS 402
Query: 302 MIVGAAKYGLGRFSLDLFNEMISRGIKPNDVTFVGVLHACSHSGLVDEGIQHLDSMYRKY 361
+I G A +GLG +L +F+EM S G PN VT + +L ACS++G ++EG++ +SM K+
Sbjct: 403 IISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKF 462
Query: 362 GIIPDAKHYTCVVDMLGRTGRLDEAYKLAKSIQVDPDGGPLLWGTLLSASRLHGRVDIAV 421
+ P +HY+C VDMLGR G++D+A +L +S+ + PD +WG LL A + H R+D+A
Sbjct: 463 CVTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIKPDA--TVWGALLGACKTHSRLDLAE 520
Query: 422 EASNQLIESNQQVANAYVTLSNTYALAGEWENVHSLRSEMKRTGIHKEPGCSWVEIRDQT 481
A+ +L E+ A YV LS+ A +W +V +R M+ + K PGCSW+E+ +
Sbjct: 521 VAAKKLFENEPDNAGTYVLLSSINASRSKWGDVAVVRKNMRTNNVSKFPGCSWIEVGKKV 580
Query: 482 YAFYAGNAL-FERGSEVLSLLRELERKMKERGYVGGKTGLVFVDVEDEAREEIVGLHSER 540
+ F G + +L +L + + ++E GY V DV++E + + + HSER
Sbjct: 581 HMFTRGGIKNHPEQAMILMMLEKTDGLLREAGY-SPDCSHVLHDVDEEEKVDSLSRHSER 639
Query: 541 LALAFGLISIPKGITIRIMKNLRMCRDCHDVFKLISDIVERDFVVRDVNRFHHFRNGSCS 600
LA+A+GL+ +P+G+ IR+MKNLR+C DCH KLIS + ER+ ++RD NRFHHF NG CS
Sbjct: 640 LAVAYGLLKLPEGVPIRVMKNLRVCGDCHAAIKLISKVTEREIILRDANRFHHFNNGECS 699
Query: 601 CGDFW 605
C D+W
Sbjct: 700 CRDYW 704
Score = 94.0 bits (232), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 138/295 (46%), Gaps = 23/295 (7%)
Query: 61 NTFTLNHLINCYVRLKKTQVARQLFDEMLEPNVVSYTSLMAGYINMGQPQIALLLFQKML 120
N + N L++ Y++ + AR +F+ M E NVVS+T+++ GY+ G A LF +M
Sbjct: 78 NVVSWNGLVSGYIKNRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRMP 137
Query: 121 GNLVWPNEFTFATVIKACSMLADLITGKQIHTHIETFGFQYNLVVCSSLVDMYGKCND-- 178
NE ++ M LI +I + + V +S + G C +
Sbjct: 138 ER----NEVSWTV------MFGGLIDDGRIDKARKLYDMMPVKDVVASTNMIGGLCREGR 187
Query: 179 VDGARRVFDLMGCRNVVSWTSIIVAHAQNAQGHEALEMFREFNYQSRDRPNQHMLASVIN 238
VD AR +FD M RNVV+WT++I + QN + A ++F E + + ML
Sbjct: 188 VDEARLIFDEMRERNVVTWTTMITGYRQNNRVDVARKLF-EVMPEKTEVSWTSML----- 241
Query: 239 ACASLGRLVSGKVAHGVVVRSGCEFNDVVA-SALVDMYAKCGSVNYSDKVFNRISNPSVV 297
LG +SG++ V+A +A++ + + G ++ + +VF+ + +
Sbjct: 242 ----LGYTLSGRIEDAEEFFEVMPMKPVIACNAMIVGFGEVGEISKARRVFDLMEDRDNA 297
Query: 298 TYTSMIVGAAKYGLGRFSLDLFNEMISRGIKPNDVTFVGVLHACSHSGLVDEGIQ 352
T+ MI + G +LDLF +M +G++P+ + + +L C+ + G Q
Sbjct: 298 TWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQ 352
Score = 71.2 bits (173), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 115/262 (43%), Gaps = 13/262 (4%)
Query: 11 FTLAASSLTRQNKRSSCHTK-AHFIQQLQECKHLISLA---SVHSEILKSGFLSNTFTLN 66
F L A L Q ++ I L C L SL VH+ +++ F + + +
Sbjct: 311 FELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVAS 370
Query: 67 HLINCYVRLKKTQVARQLFDEMLEPNVVSYTSLMAGYINMGQPQIALLLFQKMLGNLVWP 126
L+ YV+ + A+ +FD +++ + S+++GY + G + AL +F +M + P
Sbjct: 371 VLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMP 430
Query: 127 NEFTFATVIKACSMLADLITGKQIHTHIET-FGFQYNLVVCSSLVDMYGKCNDVDGARRV 185
N+ T ++ ACS L G +I +E+ F + S VDM G+ VD A +
Sbjct: 431 NKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMEL 490
Query: 186 FDLMGCR-NVVSWTSIIVAHAQNAQGHEALEMFREFNYQSRDRPNQHMLASVINACASLG 244
+ M + + W +++ A +++ A ++ D ++L S INA
Sbjct: 491 IESMTIKPDATVWGALLGACKTHSRLDLAEVAAKKLFENEPDNAGTYVLLSSINA----S 546
Query: 245 RLVSGKVAHGVVVRSGCEFNDV 266
R G VA VVR N+V
Sbjct: 547 RSKWGDVA---VVRKNMRTNNV 565
Score = 68.6 bits (166), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 77/339 (22%), Positives = 145/339 (42%), Gaps = 60/339 (17%)
Query: 53 ILKSGFLSNT-FTLNHLINCYVRLKKTQVARQLFDEMLEPNVVSYTSLMAGYINMGQPQI 111
IL+ +L++T + I+ R+ K AR+ FD + + S+ S+++GY + G P+
Sbjct: 7 ILRRTYLTSTGVNCSFEISRLSRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKE 66
Query: 112 ALLLFQKMLGNLVWPNEFTFATVIKACSMLADLITGKQIHTHIETFGFQYNLVVCSSLVD 171
A LF +M + N+V + LV
Sbjct: 67 ARQLFDEM---------------------------------------SERNVVSWNGLVS 87
Query: 172 MYGKCNDVDGARRVFDLMGCRNVVSWTSIIVAHAQNAQGHEALEMFREFNYQSRDRPNQH 231
Y K + AR VF+LM RNVVSWT+++ + Q EA +F ++ +R N+
Sbjct: 88 GYIKNRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLF----WRMPER-NEV 142
Query: 232 MLASVINACASLGRLVSGKVAHGVVVRSGCEFNDVVASA-LVDMYAKCGSVNYSDKVFNR 290
+ GR+ + + ++ DVVAS ++ + G V+ + +F+
Sbjct: 143 SWTVMFGGLIDDGRIDKARKLYDMM-----PVKDVVASTNMIGGLCREGRVDEARLIFDE 197
Query: 291 ISNPSVVTYTSMIVGAAKYGLGRFSLDLFNEMISRGIKPNDVTFVGVLHACSHSGLVDEG 350
+ +VVT+T+MI G + + LF M + +V++ +L + SG +++
Sbjct: 198 MRERNVVTWTTMITGYRQNNRVDVARKLFEVMPEK----TEVSWTSMLLGYTLSGRIEDA 253
Query: 351 IQHLDSMYRKYGIIPDAKHYTCVVDMLGRTGRLDEAYKL 389
+ + M K I +A ++ G G + +A ++
Sbjct: 254 EEFFEVMPMKPVIACNA-----MIVGFGEVGEISKARRV 287
Score = 62.8 bits (151), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 65/296 (21%), Positives = 122/296 (41%), Gaps = 59/296 (19%)
Query: 164 VVCSSLVDMYGKCNDVDGARRVFDLMGCRNVVSWTSIIVAHAQNAQGHEALEMFREFNYQ 223
V CS + + ++ AR+ FD + + + SW SI+ + N EA ++F E +
Sbjct: 18 VNCSFEISRLSRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMS-- 75
Query: 224 SRDRPNQHMLASVINACASLGRLVSGKVAHGVVVRSGCEFNDVVASALVDMYAKCGSVNY 283
E N V + LV Y K +
Sbjct: 76 --------------------------------------ERNVVSWNGLVSGYIKNRMIVE 97
Query: 284 SDKVFNRISNPSVVTYTSMIVGAAKYGLGRFSLDLFNEMISRGIKPNDVTFVGVLHACSH 343
+ VF + +VV++T+M+ G + G+ + LF M R N+V++ +
Sbjct: 98 ARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRMPER----NEVSWTVMF----- 148
Query: 344 SGLVDEGIQHLDSMYRKYGIIP--DAKHYTCVVDMLGRTGRLDEAYKLAKSIQVDPDGGP 401
GL+D+G +D + Y ++P D T ++ L R GR+DEA + ++ +
Sbjct: 149 GGLIDDG--RIDKARKLYDMMPVKDVVASTNMIGGLCREGRVDEARLIFDEMR---ERNV 203
Query: 402 LLWGTLLSASRLHGRVDIAVEASNQLIESNQQVANAYVTLSNTYALAGEWENVHSL 457
+ W T+++ R + RVD+A + + E + ++ ++ Y L+G E+
Sbjct: 204 VTWTTMITGYRQNNRVDVARKLFEVMPEKTEV---SWTSMLLGYTLSGRIEDAEEF 256
>sp|Q9LNU6|PPR53_ARATH Pentatricopeptide repeat-containing protein At1g20230
OS=Arabidopsis thaliana GN=PCMP-H21 PE=2 SV=2
Length = 760
Score = 377 bits (968), Expect = e-103, Method: Compositional matrix adjust.
Identities = 204/586 (34%), Positives = 327/586 (55%), Gaps = 47/586 (8%)
Query: 61 NTFTLNHLINCYVRLKKTQVARQLFDEM----LEPNVVSYTSLMAGYINMGQPQIALLLF 116
+ T + L+ Y R + ++ EM +E N+VS+ +++G+ G + A+++F
Sbjct: 181 DVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMF 240
Query: 117 QKMLGNLVWPNEFTFATVIKACSMLADLITGKQIHTHIETFGFQYNLVVCSSLVDMYGK- 175
QK+ P++ T ++V+ + L G+ IH ++ G + V S+++DMYGK
Sbjct: 241 QKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKS 300
Query: 176 --------------------CND----------VDGARRVFDLMGCR----NVVSWTSII 201
CN VD A +F+L + NVVSWTSII
Sbjct: 301 GHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSII 360
Query: 202 VAHAQNAQGHEALEMFREFNYQSRDRPNQHMLASVINACASLGRLVSGKVAHGVVVRSGC 261
AQN + EALE+FRE +PN + S++ AC ++ L G+ HG VR
Sbjct: 361 AGCAQNGKDIEALELFREMQVAGV-KPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHL 419
Query: 262 EFNDVVASALVDMYAKCGSVNYSDKVFNRISNPSVVTYTSMIVGAAKYGLGRFSLDLFNE 321
N V SAL+DMYAKCG +N S VFN + ++V + S++ G + +G + + +F
Sbjct: 420 LDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFES 479
Query: 322 MISRGIKPNDVTFVGVLHACSHSGLVDEGIQHLDSMYRKYGIIPDAKHYTCVVDMLGRTG 381
++ +KP+ ++F +L AC GL DEG ++ M +YGI P +HY+C+V++LGR G
Sbjct: 480 LMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAG 539
Query: 382 RLDEAYKLAKSIQVDPDGGPLLWGTLLSASRLHGRVDIAVEASNQLIESNQQVANAYVTL 441
+L EAY L K + +PD +WG LL++ RL VD+A A+ +L + YV L
Sbjct: 540 KLQEAYDLIKEMPFEPDS--CVWGALLNSCRLQNNVDLAEIAAEKLFHLEPENPGTYVLL 597
Query: 442 SNTYALAGEWENVHSLRSEMKRTGIHKEPGCSWVEIRDQTYAFYAGNALFERGSEVLSLL 501
SN YA G W V S+R++M+ G+ K PGCSW++++++ Y AG+ + ++ +
Sbjct: 598 SNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQVKNRVYTLLAGDKSHPQIDQITEKM 657
Query: 502 RELERKMKERGYVGGKTGLVFV--DVEDEAREEIVGLHSERLALAFGLISIPKGITIRIM 559
E+ ++M++ G+ + L F DVE++ +E+++ HSE+LA+ FGL++ P G ++++
Sbjct: 658 DEISKEMRKSGH---RPNLDFALHDVEEQEQEQMLWGHSEKLAVVFGLLNTPDGTPLQVI 714
Query: 560 KNLRMCRDCHDVFKLISDIVERDFVVRDVNRFHHFRNGSCSCGDFW 605
KNLR+C DCH V K IS R+ +RD NRFHHF++G CSCGDFW
Sbjct: 715 KNLRICGDCHAVIKFISSYAGREIFIRDTNRFHHFKDGICSCGDFW 760
Score = 118 bits (296), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 101/437 (23%), Positives = 181/437 (41%), Gaps = 75/437 (17%)
Query: 50 HSEILKSGFLSNTFTLNHLINCYVRLKKTQVARQLFDEMLEPNVVSYTSLMAGYINMGQP 109
H+ ILKSG ++ + LI Y A + + +P + S++SL+
Sbjct: 38 HARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAKLF 97
Query: 110 QIALLLFQKMLGNLVWPNEFTFATVIKACSMLADLITGKQIHTHIETFGFQYNLVVCSSL 169
++ +F +M + + P+ + K C+ L+ GKQIH G + V S+
Sbjct: 98 TQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSM 157
Query: 170 VDMYGKCNDVDGARRVFDLM------------------GC-----------------RNV 194
MY +C + AR+VFD M GC N+
Sbjct: 158 FHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANI 217
Query: 195 VSWTSIIVAHAQNAQGHEALEMFREFNYQSRDRPNQHMLASVINACASLGRLVSGKVAHG 254
VSW I+ ++ EA+ MF++ ++ P+Q ++SV+ + L G++ HG
Sbjct: 218 VSWNGILSGFNRSGYHKEAVVMFQKIHHLGF-CPDQVTVSSVLPSVGDSEMLNMGRLIHG 276
Query: 255 VVVRSGCEFNDVVASALVDMYAKCGSVNYSDKVFNRIS---------------------- 292
V++ G + V SA++DMY K G V +FN+
Sbjct: 277 YVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDK 336
Query: 293 -------------NPSVVTYTSMIVGAAKYGLGRFSLDLFNEMISRGIKPNDVTFVGVLH 339
+VV++TS+I G A+ G +L+LF EM G+KPN VT +L
Sbjct: 337 ALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLP 396
Query: 340 ACSHSGLVDEGIQHLDSMYRKYGIIPDAKHYTCVVDMLGRTGRLDEAYKLAKSIQVDPDG 399
AC + + G + + ++ + + ++DM + GR++ + + + P
Sbjct: 397 ACGNIAALGHG-RSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIV---FNMMPTK 452
Query: 400 GPLLWGTLLSASRLHGR 416
+ W +L++ +HG+
Sbjct: 453 NLVCWNSLMNGFSMHGK 469
Score = 88.6 bits (218), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 87/363 (23%), Positives = 152/363 (41%), Gaps = 24/363 (6%)
Query: 149 QIHTHIETFGFQYNLVVCSSLVDMYGKCNDVDGARRVFDLMGCRNVVSWTSIIVAHAQNA 208
Q H I G Q + + + L+ Y N + A V + + S++S+I A +
Sbjct: 36 QAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAK 95
Query: 209 QGHEALEMFREFNYQSRDRPNQHMLASVINACASLGRLVSGKVAHGVVVRSGCEFNDVVA 268
+++ +F + P+ H+L ++ CA L GK H V SG + + V
Sbjct: 96 LFTQSIGVFSRM-FSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQ 154
Query: 269 SALVDMYAKCGSVNYSDKVFNRISNPSVVTYTSMIVGAAKYGLGRFSLDLFNEMISRGIK 328
++ MY +CG + + KVF+R+S+ VVT ++++ A+ G + + +EM S GI+
Sbjct: 155 GSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIE 214
Query: 329 PNDVTFVGVLHACSHSGLVDEGIQHLDSMYRKYGIIPDAKHYTCVVDMLGRT-----GRL 383
N V++ G+L + SG E + ++ G PD + V+ +G + GRL
Sbjct: 215 ANIVSWNGILSGFNRSGYHKEAVVMFQKIHH-LGFCPDQVTVSSVLPSVGDSEMLNMGRL 273
Query: 384 DEAYKLAKSIQVDPDGGPLLWGTLLSASRLHGRVDIAVEASNQLIESNQQVANAYVT-LS 442
Y + + + D + ++ G V + NQ V NAY+T LS
Sbjct: 274 IHGYVIKQGLLKD----KCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLS 329
Query: 443 NTYALAGEWENVHSLRSEMKRTGIHKEPGCSWVEIRDQTYAFYAGNALFERGSEVLSLLR 502
+ E + + + SW I AG A + E L L R
Sbjct: 330 RNGLVDKALEMFELFKEQTMELNV-----VSWTSI-------IAGCAQNGKDIEALELFR 377
Query: 503 ELE 505
E++
Sbjct: 378 EMQ 380
Score = 85.5 bits (210), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 108/231 (46%), Gaps = 36/231 (15%)
Query: 49 VHSEILKSGFLSNTFTLNHLINCYVR---------------------------------- 74
+H ++K G L + ++ +I+ Y +
Sbjct: 274 IHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGL 333
Query: 75 LKKTQVARQLFDEM-LEPNVVSYTSLMAGYINMGQPQIALLLFQKMLGNLVWPNEFTFAT 133
+ K +LF E +E NVVS+TS++AG G+ AL LF++M V PN T +
Sbjct: 334 VDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPS 393
Query: 134 VIKACSMLADLITGKQIHTHIETFGFQYNLVVCSSLVDMYGKCNDVDGARRVFDLMGCRN 193
++ AC +A L G+ H N+ V S+L+DMY KC ++ ++ VF++M +N
Sbjct: 394 MLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKN 453
Query: 194 VVSWTSIIVAHAQNAQGHEALEMFREFNYQSRDRPNQHMLASVINACASLG 244
+V W S++ + + + E + +F ++R +P+ S+++AC +G
Sbjct: 454 LVCWNSLMNGFSMHGKAKEVMSIFESL-MRTRLKPDFISFTSLLSACGQVG 503
Score = 48.1 bits (113), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 75/157 (47%), Gaps = 7/157 (4%)
Query: 37 LQECKHLISLA---SVHSEILKSGFLSNTFTLNHLINCYVRLKKTQVARQLFDEMLEPNV 93
L C ++ +L S H ++ L N + LI+ Y + + +++ +F+ M N+
Sbjct: 395 LPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNL 454
Query: 94 VSYTSLMAGYINMGQPQIALLLFQKMLGNLVWPNEFTFATVIKACSMLADLITG-KQIHT 152
V + SLM G+ G+ + + +F+ ++ + P+ +F +++ AC + G K
Sbjct: 455 VCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKM 514
Query: 153 HIETFGFQYNLVVCSSLVDMYGKCNDVDGARRVFDLM 189
E +G + L S +V++ G+ + A +DL+
Sbjct: 515 MSEEYGIKPRLEHYSCMVNLLGRAGKLQEA---YDLI 548
>sp|P93011|PP182_ARATH Pentatricopeptide repeat-containing protein At2g33760
OS=Arabidopsis thaliana GN=PCMP-H6 PE=3 SV=1
Length = 583
Score = 375 bits (962), Expect = e-103, Method: Compositional matrix adjust.
Identities = 205/567 (36%), Positives = 319/567 (56%), Gaps = 15/567 (2%)
Query: 46 LASVHSEILKSGFLSNTFTLNHLINCYVRLKKTQVARQLFDEMLEPNVVSYTSLMAGYIN 105
L VH+ ++ +G+ + L LI + LF + P+ + S++
Sbjct: 25 LQQVHAHLIVTGYGRSRSLLTKLITLACSARAIAYTHLLFLSVPLPDDFLFNSVIKSTSK 84
Query: 106 MGQPQIALLLFQKMLGNLVWPNEFTFATVIKACSMLADLITGKQIHTHIETFGFQYNLVV 165
+ P + +++ML + V P+ +TF +VIK+C+ L+ L GK +H H GF + V
Sbjct: 85 LRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALRIGKGVHCHAVVSGFGLDTYV 144
Query: 166 CSSLVDMYGKCNDVDGARRVFDLMGCRNVVSWTSIIVAHAQNAQGHEALEMFREFNYQSR 225
++LV Y KC D++GAR+VFD M +++V+W S++ QN EA+++F YQ R
Sbjct: 145 QAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVF----YQMR 200
Query: 226 D---RPNQHMLASVINACASLGRLVSGKVAHGVVVRSGCEFNDVVASALVDMYAKCGSVN 282
+ P+ S+++ACA G + G H ++ G + N + +AL+++Y++CG V
Sbjct: 201 ESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVG 260
Query: 283 YSDKVFNRISNPSVVTYTSMIVGAAKYGLGRFSLDLFNEMISR-GIKPNDVTFVGVLHAC 341
+ +VF+++ +V +T+MI +G G+ +++LFN+M G PN+VTFV VL AC
Sbjct: 261 KAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVLSAC 320
Query: 342 SHSGLVDEGIQHLDSMYRKYGIIPDAKHYTCVVDMLGRTGRLDEAYKLAKSIQVDPDG-- 399
+H+GLV+EG M + Y +IP +H+ C+VDMLGR G LDEAYK Q+D G
Sbjct: 321 AHAGLVEEGRSVYKRMTKSYRLIPGVEHHVCMVDMLGRAGFLDEAYKFIH--QLDATGKA 378
Query: 400 -GPLLWGTLLSASRLHGRVDIAVEASNQLIESNQQVANAYVTLSNTYALAGEWENVHSLR 458
P LW +L A ++H D+ VE + +LI +V LSN YAL+G+ + V +R
Sbjct: 379 TAPALWTAMLGACKMHRNYDLGVEIAKRLIALEPDNPGHHVMLSNIYALSGKTDEVSHIR 438
Query: 459 SEMKRTGIHKEPGCSWVEIRDQTYAFYAGNALFERGSEVLSLLRELERKMKERGYVGGKT 518
M R + K+ G S +E+ ++TY F G+ + E+ L L + KE GY +
Sbjct: 439 DGMMRNNLRKQVGYSVIEVENKTYMFSMGDESHQETGEIYRYLETLISRCKEIGY-APVS 497
Query: 519 GLVFVDVEDEAREEIVGLHSERLALAFGLISIPKGITIRIMKNLRMCRDCHDVFKLISDI 578
V VE+E +E + HSE+LA+AFGL+ + I I+KNLR+C DCH FK IS +
Sbjct: 498 EEVMHQVEEEEKEFALRYHSEKLAVAFGLLKTVD-VAITIVKNLRICEDCHSAFKYISIV 556
Query: 579 VERDFVVRDVNRFHHFRNGSCSCGDFW 605
R VRD RFHHF+NGSCSC D+W
Sbjct: 557 SNRQITVRDKLRFHHFQNGSCSCLDYW 583
Score = 126 bits (316), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 149/295 (50%), Gaps = 19/295 (6%)
Query: 33 FIQQLQECKHLISL---ASVHSEILKSGFLSNTFTLNHLINCYVRLKKTQVARQLFDEML 89
F ++ C L +L VH + SGF +T+ L+ Y + + ARQ+FD M
Sbjct: 110 FTSVIKSCADLSALRIGKGVHCHAVVSGFGLDTYVQAALVTFYSKCGDMEGARQVFDRMP 169
Query: 90 EPNVVSYTSLMAGYINMGQPQIALLLFQKMLGNLVWPNEFTFATVIKACSMLADLITGKQ 149
E ++V++ SL++G+ G A+ +F +M + P+ TF +++ AC+ + G
Sbjct: 170 EKSIVAWNSLVSGFEQNGLADEAIQVFYQMRESGFEPDSATFVSLLSACAQTGAVSLGSW 229
Query: 150 IHTHIETFGFQYNLVVCSSLVDMYGKCNDVDGARRVFDLMGCRNVVSWTSIIVAHAQNAQ 209
+H +I + G N+ + ++L+++Y +C DV AR VFD M NV +WT++I A+ +
Sbjct: 230 VHQYIISEGLDLNVKLGTALINLYSRCGDVGKAREVFDKMKETNVAAWTAMISAYGTHGY 289
Query: 210 GHEALEMFREFNYQSRDRPNQHMLASVINACASLGRLVSGKVAHGVVVRS-----GCEFN 264
G +A+E+F + PN +V++ACA G + G+ + + +S G E +
Sbjct: 290 GQQAVELFNKMEDDCGPIPNNVTFVAVLSACAHAGLVEEGRSVYKRMTKSYRLIPGVEHH 349
Query: 265 DVVASALVDMYAKCGSVNYSDKVFNRISNPSVVTYTSM---IVGAAK----YGLG 312
+VDM + G ++ + K +++ T ++ ++GA K Y LG
Sbjct: 350 ----VCMVDMLGRAGFLDEAYKFIHQLDATGKATAPALWTAMLGACKMHRNYDLG 400
>sp|Q9FK93|PP406_ARATH Pentatricopeptide repeat-containing protein At5g39680
OS=Arabidopsis thaliana GN=EMB2744 PE=2 SV=1
Length = 710
Score = 374 bits (961), Expect = e-103, Method: Compositional matrix adjust.
Identities = 200/557 (35%), Positives = 324/557 (58%), Gaps = 6/557 (1%)
Query: 50 HSEILKSGFLSNTFTLNHLINCYVRLKKTQVARQLFDEMLEPNVVSYTSLMAGYINMGQP 109
H LK G +S+ F N L+ Y A ++ D++ ++ ++S ++GY+ G
Sbjct: 159 HGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSALSGYLECGAF 218
Query: 110 QIALLLFQKMLG-NLVWPNEFTFATVIKACSMLADLITGKQIHTHIETFGFQYNLVVCSS 168
+ L + +K + VW N T+ + ++ S L DL Q+H+ + FGF + C +
Sbjct: 219 KEGLDVLRKTANEDFVW-NNLTYLSSLRLFSNLRDLNLALQVHSRMVRFGFNAEVEACGA 277
Query: 169 LVDMYGKCNDVDGARRVFDLMGCRNVVSWTSIIVAHAQNAQGHEALEMFREFNYQSRDRP 228
L++MYGKC V A+RVFD +N+ T+I+ A+ Q+ EAL +F + + + P
Sbjct: 278 LINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKSFEEALNLFSKMDTKEVP-P 336
Query: 229 NQHMLASVINACASLGRLVSGKVAHGVVVRSGCEFNDVVASALVDMYAKCGSVNYSDKVF 288
N++ A ++N+ A L L G + HG+V++SG + +V +ALV+MYAK GS+ + K F
Sbjct: 337 NEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIEDARKAF 396
Query: 289 NRISNPSVVTYTSMIVGAAKYGLGRFSLDLFNEMISRGIKPNDVTFVGVLHACSHSGLVD 348
+ ++ +VT+ +MI G + +GLGR +L+ F+ MI G PN +TF+GVL ACSH G V+
Sbjct: 397 SGMTFRDIVTWNTMISGCSHHGLGREALEAFDRMIFTGEIPNRITFIGVLQACSHIGFVE 456
Query: 349 EGIQHLDSMYRKYGIIPDAKHYTCVVDMLGRTGRLDEAYKLAKSIQVDPDGGPLLWGTLL 408
+G+ + + + +K+ + PD +HYTC+V +L + G +A ++ ++ D + W TLL
Sbjct: 457 QGLHYFNQLMKKFDVQPDIQHYTCIVGLLSKAGMFKDAEDFMRTAPIEWD--VVAWRTLL 514
Query: 409 SASRLHGRVDIAVEASNQLIESNQQVANAYVTLSNTYALAGEWENVHSLRSEMKRTGIHK 468
+A + + + + IE + YV LSN +A + EWE V +RS M G+ K
Sbjct: 515 NACYVRRNYRLGKKVAEYAIEKYPNDSGVYVLLSNIHAKSREWEGVAKVRSLMNNRGVKK 574
Query: 469 EPGCSWVEIRDQTYAFYAGNALFERGSEVLSLLRELERKMKERGYVGGKTGLVFVDVEDE 528
EPG SW+ IR+QT+ F A + + + + ++E+ K+K GY G F DV++E
Sbjct: 575 EPGVSWIGIRNQTHVFLAEDNQHPEITLIYAKVKEVMSKIKPLGYSPDVAG-AFHDVDEE 633
Query: 529 AREEIVGLHSERLALAFGLISIPKGITIRIMKNLRMCRDCHDVFKLISDIVERDFVVRDV 588
RE+ + HSE+LA+A+GLI P+ + + KN+R+C DCH KLIS I +R V+RD
Sbjct: 634 QREDNLSYHSEKLAVAYGLIKTPEKSPLYVTKNVRICDDCHSAIKLISKISKRYIVIRDS 693
Query: 589 NRFHHFRNGSCSCGDFW 605
NRFHHF +G CSC D+W
Sbjct: 694 NRFHHFLDGQCSCCDYW 710
Score = 135 bits (341), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 109/389 (28%), Positives = 194/389 (49%), Gaps = 17/389 (4%)
Query: 48 SVHSEIL---KSGFLSNTFTLNHLINCYVRLKKTQVARQLFDEMLEPNVVSYTSLMAGYI 104
S+H+ ++ +S + + +N LIN YV+ ++T AR+LFD M E NVVS+ ++M GY
Sbjct: 52 SIHAHLIVTNQSSRAEDAYQINSLINLYVKCRETVRARKLFDLMPERNVVSWCAMMKGYQ 111
Query: 105 NMGQPQIALLLFQKM-LGNLVWPNEFTFATVIKACSMLADLITGKQIHTHIETFGFQYNL 163
N G L LF+ M PNEF V K+CS + GKQ H +G +
Sbjct: 112 NSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSGRIEEGKQFHGCFLKYGLISHE 171
Query: 164 VVCSSLVDMYGKCNDVDGARRVFDLMGCRNVVSWTSIIVAHAQNAQGHEALEMFREFNYQ 223
V ++LV MY C+ A RV D + ++ ++S + + + E L++ R+ +
Sbjct: 172 FVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSALSGYLECGAFKEGLDVLRKTANE 231
Query: 224 SRDRPNQHMLASVINACASLGRLVSGKVAHGVVVRSGCEFNDVVASALVDMYAKCGSVNY 283
N L+S + ++L L H +VR G AL++MY KCG V Y
Sbjct: 232 DFVWNNLTYLSS-LRLFSNLRDLNLALQVHSRMVRFGFNAEVEACGALINMYGKCGKVLY 290
Query: 284 SDKVFNRISNPSVVTYTSMIVGAAKYGLGRFSLDLFNEMISRGIKPNDVTFVGVLHACSH 343
+ +VF+ ++ T+++ + +L+LF++M ++ + PN+ TF +L++ +
Sbjct: 291 AQRVFDDTHAQNIFLNTTIMDAYFQDKSFEEALNLFSKMDTKEVPPNEYTFAILLNSIAE 350
Query: 344 SGLVDEG-IQH---LDSMYRKYGIIPDAKHYTCVVDMLGRTGRLDEAYKLAKSIQVDPDG 399
L+ +G + H L S YR + ++ +A +V+M ++G +++A K +
Sbjct: 351 LSLLKQGDLLHGLVLKSGYRNHVMVGNA-----LVNMYAKSGSIEDARKAFSGMTFR--- 402
Query: 400 GPLLWGTLLSASRLHGRVDIAVEASNQLI 428
+ W T++S HG A+EA +++I
Sbjct: 403 DIVTWNTMISGCSHHGLGREALEAFDRMI 431
Score = 106 bits (264), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 108/201 (53%), Gaps = 1/201 (0%)
Query: 49 VHSEILKSGFLSNTFTLNHLINCYVRLKKTQVARQLFDEMLEPNVVSYTSLMAGYINMGQ 108
VHS +++ GF + LIN Y + K A+++FD+ N+ T++M Y
Sbjct: 259 VHSRMVRFGFNAEVEACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKS 318
Query: 109 PQIALLLFQKMLGNLVWPNEFTFATVIKACSMLADLITGKQIHTHIETFGFQYNLVVCSS 168
+ AL LF KM V PNE+TFA ++ + + L+ L G +H + G++ +++V ++
Sbjct: 319 FEEALNLFSKMDTKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMVGNA 378
Query: 169 LVDMYGKCNDVDGARRVFDLMGCRNVVSWTSIIVAHAQNAQGHEALEMFREFNYQSRDRP 228
LV+MY K ++ AR+ F M R++V+W ++I + + G EALE F + + P
Sbjct: 379 LVNMYAKSGSIEDARKAFSGMTFRDIVTWNTMISGCSHHGLGREALEAFDRMIFTG-EIP 437
Query: 229 NQHMLASVINACASLGRLVSG 249
N+ V+ AC+ +G + G
Sbjct: 438 NRITFIGVLQACSHIGFVEQG 458
Score = 100 bits (249), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 128/258 (49%), Gaps = 14/258 (5%)
Query: 134 VIKACSMLADLITGKQIHTHI--------ETFGFQYNLVVCSSLVDMYGKCNDVDGARRV 185
++K C+ + L G+ IH H+ +Q N SL+++Y KC + AR++
Sbjct: 37 LLKVCANSSYLRIGESIHAHLIVTNQSSRAEDAYQIN-----SLINLYVKCRETVRARKL 91
Query: 186 FDLMGCRNVVSWTSIIVAHAQNAQGHEALEMFREFNYQSRDRPNQHMLASVINACASLGR 245
FDLM RNVVSW +++ + + E L++F+ + RPN+ + V +C++ GR
Sbjct: 92 FDLMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSGR 151
Query: 246 LVSGKVAHGVVVRSGCEFNDVVASALVDMYAKCGSVNYSDKVFNRISNPSVVTYTSMIVG 305
+ GK HG ++ G ++ V + LV MY+ C + +V + + + ++S + G
Sbjct: 152 IEEGKQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSALSG 211
Query: 306 AAKYGLGRFSLDLFNEMISRGIKPNDVTFVGVLHACSHSGLVDEGIQHLDSMYRKYGIIP 365
+ G + LD+ + + N++T++ L S+ ++ +Q M R +G
Sbjct: 212 YLECGAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRDLNLALQVHSRMVR-FGFNA 270
Query: 366 DAKHYTCVVDMLGRTGRL 383
+ + +++M G+ G++
Sbjct: 271 EVEACGALINMYGKCGKV 288
Score = 52.8 bits (125), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 82/178 (46%), Gaps = 2/178 (1%)
Query: 28 HTKAHFIQQLQECKHLISLASVHSEILKSGFLSNTFTLNHLINCYVRLKKTQVARQLFDE 87
+T A + + E L +H +LKSG+ ++ N L+N Y + + AR+ F
Sbjct: 339 YTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIEDARKAFSG 398
Query: 88 MLEPNVVSYTSLMAGYINMGQPQIALLLFQKMLGNLVWPNEFTFATVIKACSMLADLITG 147
M ++V++ ++++G + G + AL F +M+ PN TF V++ACS + + G
Sbjct: 399 MTFRDIVTWNTMISGCSHHGLGREALEAFDRMIFTGEIPNRITFIGVLQACSHIGFVEQG 458
Query: 148 KQIHTHI-ETFGFQYNLVVCSSLVDMYGKCNDVDGARRVFDLMGCR-NVVSWTSIIVA 203
+ + F Q ++ + +V + K A +VV+W +++ A
Sbjct: 459 LHYFNQLMKKFDVQPDIQHYTCIVGLLSKAGMFKDAEDFMRTAPIEWDVVAWRTLLNA 516
>sp|Q683I9|PP295_ARATH Pentatricopeptide repeat-containing protein At3g62890
OS=Arabidopsis thaliana GN=PCMP-H82 PE=2 SV=1
Length = 573
Score = 374 bits (959), Expect = e-102, Method: Compositional matrix adjust.
Identities = 204/540 (37%), Positives = 303/540 (56%), Gaps = 42/540 (7%)
Query: 105 NMGQPQ--IALLLFQKMLGNLVWPNEFTFATVIKACSMLADLITGKQIHTHIETFGFQYN 162
N+ PQ + ++ +M + V P+ TF ++ + L G++ H I FG +
Sbjct: 37 NVSSPQRHSPISVYLRMRNHRVSPDFHTFPFLLPSFHNPLHLPLGQRTHAQILLFGLDKD 96
Query: 163 LVVCSSLVDMYGKCND-------------------------------VDGARRVFDLMGC 191
V +SL++MY C D +D AR++FD M
Sbjct: 97 PFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLIDDARKLFDEMPE 156
Query: 192 RNVVSWTSIIVAHAQNAQGHEALEMFREFNYQSRD----RPNQHMLASVINACASLGRLV 247
RNV+SW+ +I + + EAL++FRE + RPN+ +++V++AC LG L
Sbjct: 157 RNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVLSACGRLGALE 216
Query: 248 SGKVAHGVVVRSGCEFNDVVASALVDMYAKCGSVNYSDKVFNRI-SNPSVVTYTSMIVGA 306
GK H + + E + V+ +AL+DMYAKCGS+ + +VFN + S V Y++MI
Sbjct: 217 QGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKKDVKAYSAMICCL 276
Query: 307 AKYGLGRFSLDLFNEMI-SRGIKPNDVTFVGVLHACSHSGLVDEGIQHLDSMYRKYGIIP 365
A YGL LF+EM S I PN VTFVG+L AC H GL++EG + M ++GI P
Sbjct: 277 AMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKSYFKMMIEEFGITP 336
Query: 366 DAKHYTCVVDMLGRTGRLDEAYKLAKSIQVDPDGGPLLWGTLLSASRLHGRVDIAVEASN 425
+HY C+VD+ GR+G + EA S+ ++PD L+WG+LLS SR+ G + A
Sbjct: 337 SIQHYGCMVDLYGRSGLIKEAESFIASMPMEPD--VLIWGSLLSGSRMLGDIKTCEGALK 394
Query: 426 QLIESNQQVANAYVTLSNTYALAGEWENVHSLRSEMKRTGIHKEPGCSWVEIRDQTYAFY 485
+LIE + + AYV LSN YA G W V +R EM+ GI+K PGCS+VE+ + F
Sbjct: 395 RLIELDPMNSGAYVLLSNVYAKTGRWMEVKCIRHEMEVKGINKVPGCSYVEVEGVVHEFV 454
Query: 486 AGNALFERGSEVLSLLRELERKMKERGYVGGKTGLVFVDVEDEAREEIVGLHSERLALAF 545
G+ + + ++L E+ ++++E GYV T V +D+ ++ +E + HSE+LA+AF
Sbjct: 455 VGDESQQESERIYAMLDEIMQRLREAGYVT-DTKEVLLDLNEKDKEIALSYHSEKLAIAF 513
Query: 546 GLISIPKGITIRIMKNLRMCRDCHDVFKLISDIVERDFVVRDVNRFHHFRNGSCSCGDFW 605
L+ G +RI+KNLR+C DCH V K+IS + R+ VVRD NRFHHFR+GSCSC DFW
Sbjct: 514 CLMKTRPGTPVRIIKNLRICGDCHLVMKMISKLFSREIVVRDCNRFHHFRDGSCSCRDFW 573
Score = 127 bits (320), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 75/256 (29%), Positives = 134/256 (52%), Gaps = 14/256 (5%)
Query: 66 NHLINCYVRLKKTQVARQLFDEMLEPNVVSYTSLMAGYINMGQPQIALLLFQKML----- 120
N ++N Y + AR+LFDEM E NV+S++ L+ GY+ G+ + AL LF++M
Sbjct: 132 NSVVNAYAKAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPN 191
Query: 121 GNLVWPNEFTFATVIKACSMLADLITGKQIHTHIETFGFQYNLVVCSSLVDMYGKCNDVD 180
V PNEFT +TV+ AC L L GK +H +I+ + + ++V+ ++L+DMY KC ++
Sbjct: 192 EAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLE 251
Query: 181 GARRVFDLMGC-RNVVSWTSIIVAHAQNAQGHEALEMFREFNYQSRDRPNQHMLASVINA 239
A+RVF+ +G ++V +++++I A E ++F E PN ++ A
Sbjct: 252 RAKRVFNALGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGA 311
Query: 240 CASLGRLVSGKVAHGVVVRSGCEFNDVVA----SALVDMYAKCGSVNYSDKVFNRIS-NP 294
C G + GK +++ EF + +VD+Y + G + ++ + P
Sbjct: 312 CVHRGLINEGKSYFKMMIE---EFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEP 368
Query: 295 SVVTYTSMIVGAAKYG 310
V+ + S++ G+ G
Sbjct: 369 DVLIWGSLLSGSRMLG 384
>sp|Q9FRI5|PPR57_ARATH Pentatricopeptide repeat-containing protein At1g25360
OS=Arabidopsis thaliana GN=PCMP-H74 PE=2 SV=1
Length = 790
Score = 372 bits (956), Expect = e-102, Method: Compositional matrix adjust.
Identities = 205/627 (32%), Positives = 339/627 (54%), Gaps = 79/627 (12%)
Query: 50 HSEILKSGFLSNTFTLNHLINCYVRLKKT----QVARQLFDEMLEPN------------- 92
H+ LKSG T N L++ Y + + AR++FDE+LE +
Sbjct: 172 HAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVK 231
Query: 93 -------------------VVSYTSLMAGYINMGQPQIALLLFQKMLGNLVWPNEFTFAT 133
+V+Y ++++GY+N G Q AL + ++M+ + + +EFT+ +
Sbjct: 232 NGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPS 291
Query: 134 VIKACSMLADLITGKQIHTHI---ETFGFQYNLVVCSSLVDMYGKCNDVDGARRVFDLMG 190
VI+AC+ L GKQ+H ++ E F F ++ +SLV +Y KC D AR +F+ M
Sbjct: 292 VIRACATAGLLQLGKQVHAYVLRREDFSFHFD----NSLVSLYYKCGKFDEARAIFEKMP 347
Query: 191 CRNVVSWTSIIVAH-------------------------------AQNAQGHEALEMFRE 219
+++VSW +++ + A+N G E L++F
Sbjct: 348 AKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSC 407
Query: 220 FNYQSRDRPNQHMLASVINACASLGRLVSGKVAHGVVVRSGCEFNDVVASALVDMYAKCG 279
+ + P + + I +CA LG +G+ H +++ G + + +AL+ MYAKCG
Sbjct: 408 MKREGFE-PCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCG 466
Query: 280 SVNYSDKVFNRISNPSVVTYTSMIVGAAKYGLGRFSLDLFNEMISRGIKPNDVTFVGVLH 339
V + +VF + V++ ++I ++G G ++D++ EM+ +GI+P+ +T + VL
Sbjct: 467 VVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLT 526
Query: 340 ACSHSGLVDEGIQHLDSMYRKYGIIPDAKHYTCVVDMLGRTGRLDEAYKLAKSIQVDPDG 399
ACSH+GLVD+G ++ DSM Y I P A HY ++D+L R+G+ +A + +S+ P
Sbjct: 527 ACSHAGLVDQGRKYFDSMETVYRIPPGADHYARLIDLLCRSGKFSDAESVIESLPFKPTA 586
Query: 400 GPLLWGTLLSASRLHGRVDIAVEASNQLIESNQQVANAYVTLSNTYALAGEWENVHSLRS 459
+W LLS R+HG +++ + A+++L + Y+ LSN +A G+WE V +R
Sbjct: 587 E--IWEALLSGCRVHGNMELGIIAADKLFGLIPEHDGTYMLLSNMHAATGQWEEVARVRK 644
Query: 460 EMKRTGIHKEPGCSWVEIRDQTYAFYAGNALFERGSEVLSLLRELERKMKERGYVGGKTG 519
M+ G+ KE CSW+E+ Q + F + V L++L ++M+ GYV T
Sbjct: 645 LMRDRGVKKEVACSWIEMETQVHTFLVDDTSHPEAEAVYIYLQDLGKEMRRLGYVP-DTS 703
Query: 520 LVFVDVE-DEAREEIVGLHSERLALAFGLISIPKGITIRIMKNLRMCRDCHDVFKLISDI 578
V DVE D +E+++ HSE++A+AFGL+ +P G TIRI KNLR C DCH+ F+ +S +
Sbjct: 704 FVLHDVESDGHKEDMLTTHSEKIAVAFGLMKLPPGTTIRIFKNLRTCGDCHNFFRFLSWV 763
Query: 579 VERDFVVRDVNRFHHFRNGSCSCGDFW 605
V+RD ++RD RFHHFRNG CSCG+FW
Sbjct: 764 VQRDIILRDRKRFHHFRNGECSCGNFW 790
Score = 124 bits (310), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 118/483 (24%), Positives = 196/483 (40%), Gaps = 107/483 (22%)
Query: 48 SVHSEILKSGFLSNTFTLNHLINCYVRLKKTQVARQLFDEMLEPNVVSYTSLMAGYINMG 107
+VH I+ GF LN LI+ Y + + ARQLFDE+ EP+ ++ T++++GY G
Sbjct: 35 AVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISEPDKIARTTMVSGYCASG 94
Query: 108 QPQI---------------------------------ALLLFQKMLGNLVWPNEFTFATV 134
+ A+ LF KM P+ FTFA+V
Sbjct: 95 DITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNFTFASV 154
Query: 135 IKACSMLA-DLITGKQIHTHIETFGFQYNLVVCSSLVDMYGKCND----VDGARRVFDLM 189
+ +++A D Q H G Y V ++LV +Y KC + AR+VFD +
Sbjct: 155 LAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFDEI 214
Query: 190 GCRNVVSWTSIIVAHAQNA---------QG-----------------------HEALEMF 217
++ SWT+++ + +N +G EALEM
Sbjct: 215 LEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMV 274
Query: 218 REFNYQSRDRPNQHMLASVINACASLGRLVSGKVAHGVVVRSGCEFNDVVASALVDMYAK 277
R S ++ SVI ACA+ G L GK H V+R +F+ ++LV +Y K
Sbjct: 275 RRM-VSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRRE-DFSFHFDNSLVSLYYK 332
Query: 278 CGSVNYSDKVFNRISNPSVVTYTS-------------------------------MIVGA 306
CG + + +F ++ +V++ + MI G
Sbjct: 333 CGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGL 392
Query: 307 AKYGLGRFSLDLFNEMISRGIKPNDVTFVGVLHACSHSGLVDEGIQHLDSMYRKYGIIPD 366
A+ G G L LF+ M G +P D F G + +C+ G G Q + K G
Sbjct: 393 AENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNG-QQYHAQLLKIGFDSS 451
Query: 367 AKHYTCVVDMLGRTGRLDEAYKLAKSIQVDPDGGPLLWGTLLSASRLHGRVDIAVEASNQ 426
++ M + G ++EA ++ +++ P + W L++A HG AV+ +
Sbjct: 452 LSAGNALITMYAKCGVVEEARQVFRTM---PCLDSVSWNALIAALGQHGHGAEAVDVYEE 508
Query: 427 LIE 429
+++
Sbjct: 509 MLK 511
Score = 83.6 bits (205), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 94/413 (22%), Positives = 172/413 (41%), Gaps = 85/413 (20%)
Query: 131 FATVIKACSML--ADLITGKQIHTHIETFGFQYNLVVCSSLVDMYGKCNDVDGARRVFDL 188
+A ++ C L L + +H +I TFGFQ + + L+D+Y K ++++ AR++FD
Sbjct: 15 YAANLRLCLPLRRTSLQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDE 74
Query: 189 MG---------------------------------CRNVVSWTSIIVAHAQNAQGHEALE 215
+ R+ V + ++I + N G+ A+
Sbjct: 75 ISEPDKIARTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAIN 134
Query: 216 MFREFNYQSRDRPNQHMLASVINACASLGRLVSGKVA-HGVVVRSGCEFNDVVASALVDM 274
+F + ++ +P+ ASV+ A + V H ++SG + V++ALV +
Sbjct: 135 LFCKMKHEGF-KPDNFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSV 193
Query: 275 YAKCGS----VNYSDKVFNRI--------------------------------SNPSVVT 298
Y+KC S ++ + KVF+ I N +V
Sbjct: 194 YSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVA 253
Query: 299 YTSMIVGAAKYGLGRFSLDLFNEMISRGIKPNDVTFVGVLHACSHSGLVDEGIQHLDSMY 358
Y +MI G G + +L++ M+S GI+ ++ T+ V+ AC+ +GL+ G Q +
Sbjct: 254 YNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVL 313
Query: 359 RKYGIIPDAKHY-TCVVDMLGRTGRLDEAYKLAKSIQVDPDGGPLLWGTLLSASRLHGRV 417
R+ + H+ +V + + G+ DEA + + + P + W LLS G +
Sbjct: 314 RREDF---SFHFDNSLVSLYYKCGKFDEARAIFEKM---PAKDLVSWNALLSGYVSSGHI 367
Query: 418 DIAVEASNQLIESNQQVANAYVTLSNTYALAGEWENVHSLRSEMKRTGIHKEP 470
EA E ++ +++ + + A G E L S MKR G EP
Sbjct: 368 G---EAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGF--EP 415
Score = 47.4 bits (111), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 62/154 (40%), Gaps = 42/154 (27%)
Query: 227 RPNQHMLASVIN-------ACASLGR--LVSGKVAHGVVVRSGCEFNDVVASALVDMYAK 277
+PN ++ ++ N C L R L + HG ++ G + + + L+D+Y K
Sbjct: 2 QPNPDLVRAIANRYAANLRLCLPLRRTSLQLARAVHGNIITFGFQPRAHILNRLIDVYCK 61
Query: 278 CGSVNYSDKVFNRISNP---------------------------------SVVTYTSMIV 304
+NY+ ++F+ IS P V Y +MI
Sbjct: 62 SSELNYARQLFDEISEPDKIARTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMIT 121
Query: 305 GAAKYGLGRFSLDLFNEMISRGIKPNDVTFVGVL 338
G + G +++LF +M G KP++ TF VL
Sbjct: 122 GFSHNNDGYSAINLFCKMKHEGFKPDNFTFASVL 155
>sp|Q8S9M4|PP198_ARATH Pentatricopeptide repeat-containing protein At2g41080
OS=Arabidopsis thaliana GN=PCMP-H29 PE=2 SV=2
Length = 650
Score = 370 bits (951), Expect = e-101, Method: Compositional matrix adjust.
Identities = 206/577 (35%), Positives = 326/577 (56%), Gaps = 19/577 (3%)
Query: 40 CKHLISLAS----------VHSEILKSGFLSNTFTLNHLINCYVRLKKTQVARQLFDEML 89
C HL+S+ S V+ + K ++S+ N LIN YVR AR++FDEM
Sbjct: 82 CNHLMSMYSKLGDFPSAVAVYGRMRKKNYMSS----NILINGYVRAGDLVNARKVFDEMP 137
Query: 90 EPNVVSYTSLMAGYINMGQPQIALLLFQKMLGNLVWPNEFTFATVIKACSMLADLITGKQ 149
+ + ++ +++AG I + L LF++M G P+E+T +V + L + G+Q
Sbjct: 138 DRKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQ 197
Query: 150 IHTHIETFGFQYNLVVCSSLVDMYGKCNDVDGARRVFDLMGCRNVVSWTSIIVAHAQNAQ 209
IH + +G + +LVV SSL MY + + V M RN+V+W ++I+ +AQN
Sbjct: 198 IHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGC 257
Query: 210 GHEALEMFREFNYQSRDRPNQHMLASVINACASLGRLVSGKVAHGVVVRSGCEFNDVVAS 269
L +++ S RPN+ +V+++C+ L G+ H ++ G V S
Sbjct: 258 PETVLYLYKMMKI-SGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVS 316
Query: 270 ALVDMYAKCGSVNYSDKVFNRISNPSVVTYTSMIVGAAKYGLGRFSLDLFNEMISR-GIK 328
+L+ MY+KCG + + K F+ + V ++SMI +G G +++LFN M + ++
Sbjct: 317 SLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNME 376
Query: 329 PNDVTFVGVLHACSHSGLVDEGIQHLDSMYRKYGIIPDAKHYTCVVDMLGRTGRLDEAYK 388
N+V F+ +L+ACSHSGL D+G++ D M KYG P KHYTCVVD+LGR G LD+A
Sbjct: 377 INEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEA 436
Query: 389 LAKSIQVDPDGGPLLWGTLLSASRLHGRVDIAVEASNQLIESNQQVANAYVTLSNTYALA 448
+ +S+ + D ++W TLLSA +H ++A ++++ + + YV L+N +A A
Sbjct: 437 IIRSMPIKTD--IVIWKTLLSACNIHKNAEMAQRVFKEILQIDPNDSACYVLLANVHASA 494
Query: 449 GEWENVHSLRSEMKRTGIHKEPGCSWVEIRDQTYAFYAGNALFERGSEVLSLLRELERKM 508
W +V +R M+ + KE G SW E + + + F G+ + E+ S L+EL +M
Sbjct: 495 KRWRDVSEVRKSMRDKNVKKEAGISWFEHKGEVHQFKMGDRSQSKSKEIYSYLKELTLEM 554
Query: 509 KERGYVGGKTGLVFVDVEDEAREEIVGLHSERLALAFGLISIPKGITIRIMKNLRMCRDC 568
K +GY T V D+++E +E + HSE+LA+AF L+ +P+G IRI+KNLR+C DC
Sbjct: 555 KLKGY-KPDTASVLHDMDEEEKESDLVQHSEKLAVAFALMILPEGAPIRIIKNLRVCSDC 613
Query: 569 HDVFKLISDIVERDFVVRDVNRFHHFRNGSCSCGDFW 605
H FK IS I R+ +RD +RFHHF NG CSCGD+W
Sbjct: 614 HVAFKYISVIKNREITLRDGSRFHHFINGKCSCGDYW 650
Score = 134 bits (336), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 98/362 (27%), Positives = 164/362 (45%), Gaps = 37/362 (10%)
Query: 116 FQKMLGNLVWPNEFTFATVIKACSMLADLITGKQIHTHIETFGFQYNLVVCSSLVDMYGK 175
FQ+ N ++ N F I++C+ L +GKQ+H + GF + +C+ L+ MY K
Sbjct: 33 FQRFRLN-IFTNTSLFTPFIQSCTTRQSLPSGKQLHCLLVVSGFSSDKFICNHLMSMYSK 91
Query: 176 CND----------------------VDG---------ARRVFDLMGCRNVVSWTSIIVAH 204
D ++G AR+VFD M R + +W ++I
Sbjct: 92 LGDFPSAVAVYGRMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGL 151
Query: 205 AQNAQGHEALEMFREFNYQSRDRPNQHMLASVINACASLGRLVSGKVAHGVVVRSGCEFN 264
Q E L +FRE + P+++ L SV + A L + G+ HG ++ G E +
Sbjct: 152 IQFEFNEEGLSLFREMHGLGFS-PDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELD 210
Query: 265 DVVASALVDMYAKCGSVNYSDKVFNRISNPSVVTYTSMIVGAAKYGLGRFSLDLFNEMIS 324
VV S+L MY + G + + V + ++V + ++I+G A+ G L L+ M
Sbjct: 211 LVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKI 270
Query: 325 RGIKPNDVTFVGVLHACSHSGLVDEGIQHLDSMYRKYGIIPDAKHYTCVVDMLGRTGRLD 384
G +PN +TFV VL +CS + +G Q + + K G + ++ M + G L
Sbjct: 271 SGCRPNKITFVTVLSSCSDLAIRGQG-QQIHAEAIKIGASSVVAVVSSLISMYSKCGCLG 329
Query: 385 EAYKLAKSIQVDPDGGPLLWGTLLSASRLHGRVDIAVEASNQLIESNQQVANAYVTLSNT 444
+A AK+ D ++W +++SA HG+ D A+E N + E N L+
Sbjct: 330 DA---AKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLL 386
Query: 445 YA 446
YA
Sbjct: 387 YA 388
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.136 0.408
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 214,118,781
Number of Sequences: 539616
Number of extensions: 8838376
Number of successful extensions: 28825
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 380
Number of HSP's successfully gapped in prelim test: 61
Number of HSP's that attempted gapping in prelim test: 21677
Number of HSP's gapped (non-prelim): 2112
length of query: 605
length of database: 191,569,459
effective HSP length: 123
effective length of query: 482
effective length of database: 125,196,691
effective search space: 60344805062
effective search space used: 60344805062
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 64 (29.3 bits)