BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>039697
MEKRFSLIQTIATAAAFSAVTAWYGFMFGRESARKDLEHLIEDLKRGNSPPPHS

High Scoring Gene Products

Symbol, full name Information P value
AT4G17085 protein from Arabidopsis thaliana 5.2e-10

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  039697
        (54 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:4010713891 - symbol:AT4G17085 "AT4G17085" spec...   143  5.2e-10   1


>TAIR|locus:4010713891 [details] [associations]
            symbol:AT4G17085 "AT4G17085" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] EMBL:CP002687
            GenomeReviews:CT486007_GR UniGene:At.23528 UniGene:At.47944
            EMBL:AK228438 IPI:IPI00786190 RefSeq:NP_001078401.1 PaxDb:Q0WR81
            PRIDE:Q0WR81 EnsemblPlants:AT4G17085.1 GeneID:5008146
            KEGG:ath:AT4G17085 TAIR:At4g17085 eggNOG:NOG326517
            HOGENOM:HOG000242076 OMA:FSAVSFW PhylomeDB:Q0WR81
            ProtClustDB:CLSN2699102 Genevestigator:Q0WR81 Uniprot:Q0WR81
        Length = 57

 Score = 143 (55.4 bits), Expect = 5.2e-10, P = 5.2e-10
 Identities = 31/57 (54%), Positives = 35/57 (61%)

Query:     1 MEKRFSLIQXXXXXXXXXXXXXWYGFMFGRESARKDLEHLIEDLKRGNS---PPPHS 54
             M+K FSLIQ             WYGFMFGRESARK+L  LIE+L+RG S     PHS
Sbjct:     1 MQKSFSLIQTVAISGVFSAVSCWYGFMFGRESARKELGGLIEELRRGGSNSDSTPHS 57


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.321   0.139   0.440    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0       54        41   0.00091  102 3  11 22  0.41    26
                                                     29  0.39    24


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  384 (41 KB)
  Total size of DFA:  64 KB (2060 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  6.16u 0.13s 6.29t   Elapsed:  00:00:01
  Total cpu time:  6.16u 0.13s 6.29t   Elapsed:  00:00:01
  Start:  Sat May 11 12:19:18 2013   End:  Sat May 11 12:19:19 2013

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