BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 039697
(54 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|449461285|ref|XP_004148372.1| PREDICTED: uncharacterized protein LOC101212897 [Cucumis sativus]
gi|449530889|ref|XP_004172424.1| PREDICTED: uncharacterized LOC101212897 [Cucumis sativus]
Length = 60
Score = 81.6 bits (200), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 40/60 (66%), Positives = 46/60 (76%), Gaps = 6/60 (10%)
Query: 1 MEKRFSLIQTIATAAAFSAVTAWYGFMFGRESARKDLEHLIEDLKRGNSPP------PHS 54
M K F+LIQT+ATA AFSA++ WYGFMFGRESARKDL LI+DL+RG S P PHS
Sbjct: 1 MGKSFTLIQTVATAGAFSAISFWYGFMFGRESARKDLGDLIQDLRRGISKPDSSSETPHS 60
>gi|356563420|ref|XP_003549961.1| PREDICTED: uncharacterized protein LOC100787508 [Glycine max]
Length = 57
Score = 81.3 bits (199), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 36/54 (66%), Positives = 45/54 (83%), Gaps = 2/54 (3%)
Query: 1 MEKRFSLIQTIATAAAFSAVTAWYGFMFGRESARKDLEHLIEDLKRG--NSPPP 52
MEK+ +L+QTIATA FSA++ WYGFMFGRES+RK+L LIEDL+ G N+PPP
Sbjct: 1 MEKKMTLVQTIATAGVFSAISFWYGFMFGRESSRKELSQLIEDLRHGGENTPPP 54
>gi|297804476|ref|XP_002870122.1| hypothetical protein ARALYDRAFT_329817 [Arabidopsis lyrata subsp.
lyrata]
gi|297315958|gb|EFH46381.1| hypothetical protein ARALYDRAFT_329817 [Arabidopsis lyrata subsp.
lyrata]
Length = 57
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/57 (64%), Positives = 45/57 (78%), Gaps = 3/57 (5%)
Query: 1 MEKRFSLIQTIATAAAFSAVTAWYGFMFGRESARKDLEHLIEDLKRGNS---PPPHS 54
M+K F+LIQT+A + FSAV+ WYGFMFGRESARK+L LIE+L+RG S PPHS
Sbjct: 1 MQKSFTLIQTVAISGVFSAVSCWYGFMFGRESARKELGGLIEELRRGGSNSDSPPHS 57
>gi|145333243|ref|NP_001078401.1| Putative membrane lipoprotein [Arabidopsis thaliana]
gi|110736818|dbj|BAF00368.1| hypothetical protein [Arabidopsis thaliana]
gi|332658447|gb|AEE83847.1| Putative membrane lipoprotein [Arabidopsis thaliana]
Length = 57
Score = 79.0 bits (193), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/57 (64%), Positives = 44/57 (77%), Gaps = 3/57 (5%)
Query: 1 MEKRFSLIQTIATAAAFSAVTAWYGFMFGRESARKDLEHLIEDLKRGNS---PPPHS 54
M+K FSLIQT+A + FSAV+ WYGFMFGRESARK+L LIE+L+RG S PHS
Sbjct: 1 MQKSFSLIQTVAISGVFSAVSCWYGFMFGRESARKELGGLIEELRRGGSNSDSTPHS 57
>gi|356511143|ref|XP_003524289.1| PREDICTED: uncharacterized protein LOC100814347 [Glycine max]
Length = 59
Score = 78.2 bits (191), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 33/52 (63%), Positives = 42/52 (80%)
Query: 1 MEKRFSLIQTIATAAAFSAVTAWYGFMFGRESARKDLEHLIEDLKRGNSPPP 52
MEK+ +L+QTIATA FSA++ WYGFMFGRES+RK+L LI+DL+ G PP
Sbjct: 1 MEKKITLVQTIATAGVFSAISFWYGFMFGRESSRKELSDLIQDLRHGGGNPP 52
>gi|255552938|ref|XP_002517512.1| conserved hypothetical protein [Ricinus communis]
gi|223543523|gb|EEF45054.1| conserved hypothetical protein [Ricinus communis]
Length = 58
Score = 77.8 bits (190), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 35/47 (74%), Positives = 41/47 (87%)
Query: 1 MEKRFSLIQTIATAAAFSAVTAWYGFMFGRESARKDLEHLIEDLKRG 47
M+K FSL+QT+ATA FSAV+ WYGFMFGRESARK+L LIEDL+RG
Sbjct: 1 MQKTFSLLQTVATAGVFSAVSFWYGFMFGRESARKELGDLIEDLRRG 47
>gi|224126589|ref|XP_002329592.1| predicted protein [Populus trichocarpa]
gi|222870301|gb|EEF07432.1| predicted protein [Populus trichocarpa]
Length = 63
Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/48 (68%), Positives = 40/48 (83%)
Query: 1 MEKRFSLIQTIATAAAFSAVTAWYGFMFGRESARKDLEHLIEDLKRGN 48
M + F+L+QT+ TA FSAV+ WYGFMFGRESARK+L LIEDL+RGN
Sbjct: 1 MGRSFTLVQTVTTAGVFSAVSYWYGFMFGRESARKELGDLIEDLRRGN 48
>gi|225427368|ref|XP_002282894.1| PREDICTED: uncharacterized protein LOC100242112 [Vitis vinifera]
gi|297742191|emb|CBI33978.3| unnamed protein product [Vitis vinifera]
Length = 57
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/56 (64%), Positives = 42/56 (75%), Gaps = 3/56 (5%)
Query: 1 MEKRFSLIQTIATAAAFSAVTAWYGFMFGRESARKDLEHLIEDLKR---GNSPPPH 53
M K F+LIQT+ATA FSAV+ WYGFM GRESARK+L LIEDL+R +S PH
Sbjct: 1 MAKGFTLIQTVATAGVFSAVSFWYGFMIGRESARKELSELIEDLRRQIPDSSSHPH 56
>gi|125556747|gb|EAZ02353.1| hypothetical protein OsI_24457 [Oryza sativa Indica Group]
Length = 70
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 28/46 (60%), Positives = 37/46 (80%)
Query: 3 KRFSLIQTIATAAAFSAVTAWYGFMFGRESARKDLEHLIEDLKRGN 48
K+ +L+QT+A A FSAV+ WYGFMFGRESAR++L +IEDL+ G
Sbjct: 5 KKITLLQTVAFAGVFSAVSCWYGFMFGRESARRELGGIIEDLRSGG 50
>gi|357123743|ref|XP_003563567.1| PREDICTED: uncharacterized protein LOC100837547 [Brachypodium
distachyon]
Length = 65
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 27/47 (57%), Positives = 38/47 (80%)
Query: 3 KRFSLIQTIATAAAFSAVTAWYGFMFGRESARKDLEHLIEDLKRGNS 49
K+ +L+QT+A A FSAV+ WYGFMFGRESAR++L +I+DL+ +S
Sbjct: 4 KKLTLLQTVAAAGVFSAVSCWYGFMFGRESARRELGGIIDDLRNSSS 50
>gi|53791775|dbj|BAD53569.1| hypothetical protein [Oryza sativa Japonica Group]
gi|125598496|gb|EAZ38276.1| hypothetical protein OsJ_22654 [Oryza sativa Japonica Group]
Length = 70
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 27/43 (62%), Positives = 36/43 (83%)
Query: 3 KRFSLIQTIATAAAFSAVTAWYGFMFGRESARKDLEHLIEDLK 45
K+ +L+QT+A A FSAV+ WYGFMFGRESAR++L +IEDL+
Sbjct: 5 KKITLLQTVAFAGVFSAVSCWYGFMFGRESARRELGGIIEDLR 47
>gi|195629540|gb|ACG36411.1| hypothetical protein [Zea mays]
gi|223944931|gb|ACN26549.1| unknown [Zea mays]
gi|413934938|gb|AFW69489.1| hypothetical protein ZEAMMB73_060453 [Zea mays]
gi|413934939|gb|AFW69490.1| hypothetical protein ZEAMMB73_060453 [Zea mays]
Length = 63
Score = 64.3 bits (155), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 29/48 (60%), Positives = 38/48 (79%), Gaps = 1/48 (2%)
Query: 3 KRFSLIQTIATAAAFSAVTAWYGFMFGRESARKDLEHLIEDLKRGNSP 50
K+ +L+QT+A A FSAV+ WYGFMFGRESAR++L +I+DL R N P
Sbjct: 4 KKLTLLQTVAAAGVFSAVSFWYGFMFGRESARRELGGIIDDL-RSNKP 50
>gi|242097068|ref|XP_002439024.1| hypothetical protein SORBIDRAFT_10g030100 [Sorghum bicolor]
gi|241917247|gb|EER90391.1| hypothetical protein SORBIDRAFT_10g030100 [Sorghum bicolor]
Length = 66
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/48 (58%), Positives = 38/48 (79%), Gaps = 1/48 (2%)
Query: 3 KRFSLIQTIATAAAFSAVTAWYGFMFGRESARKDLEHLIEDLKRGNSP 50
K+ +L++T+A A FSAV+ WYGFMFGRESAR++L +I+DL R N P
Sbjct: 4 KKLTLLETVAAAGVFSAVSFWYGFMFGRESARRELGGIIDDL-RSNKP 50
>gi|413922491|gb|AFW62423.1| hypothetical protein ZEAMMB73_273352 [Zea mays]
Length = 113
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 37/48 (77%), Gaps = 1/48 (2%)
Query: 3 KRFSLIQTIATAAAFSAVTAWYGFMFGRESARKDLEHLIEDLKRGNSP 50
K+ +L+QT+A FSA++ WYGFMFGRESAR++L +I+DL R N P
Sbjct: 4 KKLTLLQTMAATGVFSAISFWYGFMFGRESARRELGGIIDDL-RSNKP 50
>gi|358448720|ref|ZP_09159220.1| hypothetical protein KYE_05531 [Marinobacter manganoxydans
MnI7-9]
gi|385331342|ref|YP_005885293.1| general secretion pathway protein C-like protein [Marinobacter
adhaerens HP15]
gi|311694492|gb|ADP97365.1| general secretion pathway protein C-like protein [Marinobacter
adhaerens HP15]
gi|357227097|gb|EHJ05562.1| hypothetical protein KYE_05531 [Marinobacter manganoxydans
MnI7-9]
Length = 216
Score = 37.7 bits (86), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 4/53 (7%)
Query: 3 KRFSLIQTIATAAAFSAVTAWYGFMF----GRESARKDLEHLIEDLKRGNSPP 51
+RF LI + AA A+TAW G+ F G++ +++ L+ D G PP
Sbjct: 6 ERFPLILALVAGAAMVALTAWQGYRFWQMEGQQGQYDNVQPLVSDPAAGREPP 58
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.320 0.132 0.394
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 833,073,158
Number of Sequences: 23463169
Number of extensions: 20358288
Number of successful extensions: 61406
Number of sequences better than 100.0: 16
Number of HSP's better than 100.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 61391
Number of HSP's gapped (non-prelim): 16
length of query: 54
length of database: 8,064,228,071
effective HSP length: 27
effective length of query: 27
effective length of database: 7,430,722,508
effective search space: 200629507716
effective search space used: 200629507716
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 69 (31.2 bits)