Query 039701
Match_columns 476
No_of_seqs 122 out of 1423
Neff 9.8
Searched_HMMs 29240
Date Mon Mar 25 21:27:38 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/039701.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/039701hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3hbf_A Flavonoid 3-O-glucosylt 100.0 1E-67 3.5E-72 526.3 39.6 426 8-472 13-453 (454)
2 2pq6_A UDP-glucuronosyl/UDP-gl 100.0 1.3E-62 4.5E-67 499.4 37.5 445 1-473 1-479 (482)
3 2vch_A Hydroquinone glucosyltr 100.0 3.3E-61 1.1E-65 487.5 44.0 430 8-473 6-469 (480)
4 2c1x_A UDP-glucose flavonoid 3 100.0 8.5E-61 2.9E-65 481.5 37.7 433 1-472 1-451 (456)
5 2acv_A Triterpene UDP-glucosyl 100.0 3E-60 1E-64 478.7 37.1 433 8-472 9-462 (463)
6 2iya_A OLEI, oleandomycin glyc 100.0 6.3E-46 2.2E-50 372.3 31.8 402 1-470 1-419 (424)
7 4amg_A Snogd; transferase, pol 100.0 5.1E-45 1.8E-49 362.9 23.4 363 8-475 22-399 (400)
8 1iir_A Glycosyltransferase GTF 100.0 8.8E-42 3E-46 341.1 27.4 371 9-474 1-398 (415)
9 1rrv_A Glycosyltransferase GTF 100.0 1.1E-40 3.7E-45 333.3 27.5 357 9-452 1-385 (416)
10 3rsc_A CALG2; TDP, enediyne, s 100.0 4.1E-40 1.4E-44 329.2 31.5 381 8-471 20-412 (415)
11 3ia7_A CALG4; glycosysltransfe 100.0 3.9E-39 1.3E-43 320.5 34.5 384 9-473 5-399 (402)
12 3h4t_A Glycosyltransferase GTF 100.0 1.6E-39 5.5E-44 323.3 28.3 350 9-451 1-366 (404)
13 2iyf_A OLED, oleandomycin glyc 100.0 5.5E-39 1.9E-43 322.5 32.2 373 1-453 1-384 (430)
14 2p6p_A Glycosyl transferase; X 100.0 1.5E-38 5.3E-43 314.4 24.4 361 9-469 1-376 (384)
15 2yjn_A ERYCIII, glycosyltransf 100.0 8.6E-39 2.9E-43 322.0 22.0 382 8-470 20-433 (441)
16 4fzr_A SSFS6; structural genom 100.0 1.2E-36 4.2E-41 302.3 22.2 349 8-452 15-384 (398)
17 3oti_A CALG3; calicheamicin, T 100.0 2.6E-35 9E-40 292.6 24.7 346 8-452 20-381 (398)
18 3tsa_A SPNG, NDP-rhamnosyltran 100.0 9E-35 3.1E-39 288.1 25.8 360 8-468 1-384 (391)
19 3otg_A CALG1; calicheamicin, T 100.0 5.6E-32 1.9E-36 269.9 29.0 367 8-471 20-407 (412)
20 3s2u_A UDP-N-acetylglucosamine 100.0 4.6E-31 1.6E-35 258.2 27.0 340 8-476 2-356 (365)
21 2o6l_A UDP-glucuronosyltransfe 99.9 7.2E-27 2.5E-31 203.2 14.7 161 266-451 8-169 (170)
22 1f0k_A MURG, UDP-N-acetylgluco 99.9 2E-20 6.7E-25 183.0 24.4 320 9-446 7-337 (364)
23 3hbm_A UDP-sugar hydrolase; PS 99.6 4.8E-15 1.6E-19 137.7 14.5 118 279-403 157-276 (282)
24 2jzc_A UDP-N-acetylglucosamine 99.6 1.1E-14 3.6E-19 129.8 10.9 119 277-399 26-184 (224)
25 3okp_A GDP-mannose-dependent a 99.5 5.5E-11 1.9E-15 116.8 29.4 346 8-475 4-380 (394)
26 3c48_A Predicted glycosyltrans 99.5 8E-11 2.7E-15 117.5 30.0 368 8-474 20-425 (438)
27 1v4v_A UDP-N-acetylglucosamine 99.4 2E-12 7E-17 126.5 14.6 136 279-440 198-342 (376)
28 2r60_A Glycosyl transferase, g 99.4 8.3E-11 2.8E-15 119.6 26.8 368 1-449 1-441 (499)
29 2gek_A Phosphatidylinositol ma 99.4 1.2E-10 4.2E-15 114.8 25.2 340 8-474 20-383 (406)
30 3fro_A GLGA glycogen synthase; 99.4 7E-10 2.4E-14 110.4 29.4 163 281-475 252-431 (439)
31 1vgv_A UDP-N-acetylglucosamine 99.3 4.5E-12 1.6E-16 124.3 12.8 141 278-443 204-353 (384)
32 2jjm_A Glycosyl transferase, g 99.3 7.7E-10 2.6E-14 108.8 27.6 351 8-475 15-386 (394)
33 3dzc_A UDP-N-acetylglucosamine 99.2 2.7E-11 9.2E-16 119.2 11.5 331 9-440 26-375 (396)
34 2iw1_A Lipopolysaccharide core 99.2 7.1E-09 2.4E-13 100.9 27.3 145 281-450 197-355 (374)
35 3ot5_A UDP-N-acetylglucosamine 99.2 3.1E-10 1.1E-14 111.8 17.0 347 8-471 27-392 (403)
36 3beo_A UDP-N-acetylglucosamine 99.2 3.4E-10 1.2E-14 110.4 14.8 327 8-443 8-353 (375)
37 2x6q_A Trehalose-synthase TRET 99.1 1.6E-09 5.5E-14 107.3 18.4 162 281-475 232-415 (416)
38 2iuy_A Avigt4, glycosyltransfe 99.1 4.2E-09 1.4E-13 101.4 17.7 123 282-431 164-307 (342)
39 4hwg_A UDP-N-acetylglucosamine 99.0 1.8E-09 6.2E-14 105.4 14.2 346 9-471 10-374 (385)
40 3s28_A Sucrose synthase 1; gly 98.9 1.3E-06 4.3E-11 92.7 29.0 143 281-447 573-749 (816)
41 1rzu_A Glycogen synthase 1; gl 98.8 1.4E-06 4.7E-11 87.9 24.5 159 282-474 293-475 (485)
42 2qzs_A Glycogen synthase; glyc 98.7 3.2E-06 1.1E-10 85.2 24.5 160 281-474 293-476 (485)
43 2vsy_A XCC0866; transferase, g 98.7 2.2E-05 7.6E-10 80.7 29.5 118 332-473 434-558 (568)
44 3oy2_A Glycosyltransferase B73 98.7 1.6E-06 5.6E-11 85.3 20.1 162 281-475 185-391 (413)
45 2f9f_A First mannosyl transfer 98.6 3.2E-07 1.1E-11 79.2 12.8 136 282-444 25-175 (177)
46 2xci_A KDO-transferase, 3-deox 98.5 6.2E-05 2.1E-09 73.0 25.5 99 333-452 261-365 (374)
47 2hy7_A Glucuronosyltransferase 98.1 0.00038 1.3E-08 68.3 20.9 115 281-434 223-354 (406)
48 3qhp_A Type 1 capsular polysac 98.1 5.4E-05 1.8E-09 64.0 12.6 143 280-450 2-158 (166)
49 4gyw_A UDP-N-acetylglucosamine 97.8 0.00038 1.3E-08 73.4 17.0 149 277-444 520-680 (723)
50 3vue_A GBSS-I, granule-bound s 97.8 0.0087 3E-07 60.7 25.9 136 282-431 329-476 (536)
51 2bfw_A GLGA glycogen synthase; 97.8 0.00044 1.5E-08 60.2 13.7 94 333-449 96-198 (200)
52 3q3e_A HMW1C-like glycosyltran 97.7 0.00037 1.3E-08 70.7 13.7 148 280-446 441-602 (631)
53 3tov_A Glycosyl transferase fa 97.4 0.002 6.8E-08 61.7 13.2 104 8-145 8-115 (349)
54 1psw_A ADP-heptose LPS heptosy 97.0 0.038 1.3E-06 52.4 18.2 93 278-376 179-286 (348)
55 3rhz_A GTF3, nucleotide sugar 97.0 0.002 6.8E-08 61.2 8.7 110 333-470 215-336 (339)
56 2gt1_A Lipopolysaccharide hept 94.8 0.89 3.1E-05 42.4 15.7 136 279-433 178-323 (326)
57 2x0d_A WSAF; GT4 family, trans 94.6 0.033 1.1E-06 54.4 5.5 81 331-434 294-381 (413)
58 1uqt_A Alpha, alpha-trehalose- 88.9 1.6 5.5E-05 43.3 9.6 108 334-474 333-454 (482)
59 3nb0_A Glycogen [starch] synth 88.4 1.5 5.1E-05 45.0 8.9 98 334-449 495-616 (725)
60 3t5t_A Putative glycosyltransf 86.7 10 0.00034 37.6 13.6 109 333-473 353-472 (496)
61 1g5t_A COB(I)alamin adenosyltr 80.1 20 0.00068 30.4 11.0 37 8-44 28-64 (196)
62 2yxb_A Coenzyme B12-dependent 78.9 2.9 9.9E-05 34.5 5.3 46 8-53 18-63 (161)
63 2x0d_A WSAF; GT4 family, trans 78.8 0.85 2.9E-05 44.3 2.3 39 8-46 46-89 (413)
64 1ccw_A Protein (glutamate muta 78.4 3.8 0.00013 32.7 5.7 44 8-51 3-46 (137)
65 3zqu_A Probable aromatic acid 76.7 3.2 0.00011 35.8 5.1 44 8-52 4-47 (209)
66 2ywr_A Phosphoribosylglycinami 76.7 36 0.0012 29.3 12.1 106 9-149 2-111 (216)
67 3q0i_A Methionyl-tRNA formyltr 76.2 32 0.0011 31.7 12.1 37 3-45 3-39 (318)
68 1kjn_A MTH0777; hypotethical p 75.8 3 0.0001 33.3 4.2 46 9-54 7-54 (157)
69 1y80_A Predicted cobalamin bin 74.0 6 0.00021 34.1 6.3 48 8-55 88-135 (210)
70 1mvl_A PPC decarboxylase athal 73.8 4.2 0.00014 35.1 5.1 42 8-51 19-60 (209)
71 3fgn_A Dethiobiotin synthetase 73.1 32 0.0011 30.4 11.0 119 8-150 25-167 (251)
72 3dfz_A SIRC, precorrin-2 dehyd 72.1 5.8 0.0002 34.6 5.7 155 271-452 25-185 (223)
73 4dim_A Phosphoribosylglycinami 71.7 12 0.00042 35.7 8.5 33 8-45 7-39 (403)
74 3auf_A Glycinamide ribonucleot 70.9 52 0.0018 28.6 12.1 107 8-149 22-132 (229)
75 2i2x_B MTAC, methyltransferase 70.4 6.1 0.00021 35.4 5.6 38 8-45 123-160 (258)
76 4dzz_A Plasmid partitioning pr 70.3 28 0.00097 29.1 9.8 37 10-46 2-40 (206)
77 2bw0_A 10-FTHFDH, 10-formyltet 69.5 33 0.0011 31.8 10.6 105 8-150 22-131 (329)
78 3qjg_A Epidermin biosynthesis 69.2 5.8 0.0002 33.1 4.8 43 8-51 5-47 (175)
79 3ezx_A MMCP 1, monomethylamine 67.4 11 0.00038 32.6 6.5 46 8-53 92-137 (215)
80 2qs7_A Uncharacterized protein 66.7 7.6 0.00026 31.2 4.9 52 1-53 2-53 (144)
81 1p3y_1 MRSD protein; flavoprot 65.8 3.8 0.00013 34.9 3.0 43 8-51 8-50 (194)
82 3tov_A Glycosyl transferase fa 65.4 57 0.0019 30.3 11.5 101 9-150 186-290 (349)
83 2q5c_A NTRC family transcripti 65.2 20 0.0007 30.4 7.6 33 118-153 141-173 (196)
84 3mc3_A DSRE/DSRF-like family p 63.5 14 0.00047 29.2 5.8 42 10-51 17-61 (134)
85 3tqr_A Phosphoribosylglycinami 63.4 52 0.0018 28.3 9.8 107 8-149 5-114 (215)
86 3kcq_A Phosphoribosylglycinami 62.9 40 0.0014 29.0 9.0 105 4-149 5-113 (215)
87 2r8r_A Sensor protein; KDPD, P 62.9 13 0.00045 32.4 5.9 39 8-46 6-44 (228)
88 1sbz_A Probable aromatic acid 62.3 8.7 0.0003 32.7 4.6 43 9-52 1-44 (197)
89 3lqk_A Dipicolinate synthase s 58.9 11 0.00039 32.1 4.8 40 8-47 7-46 (201)
90 1jkx_A GART;, phosphoribosylgl 58.8 86 0.0029 26.8 11.5 106 9-149 1-110 (212)
91 3tqq_A Methionyl-tRNA formyltr 58.7 59 0.002 29.8 10.0 33 8-45 2-34 (314)
92 1fmt_A Methionyl-tRNA FMet for 58.1 72 0.0025 29.2 10.5 41 108-150 72-113 (314)
93 3pdi_A Nitrogenase MOFE cofact 57.1 52 0.0018 32.3 9.9 35 107-146 391-425 (483)
94 2ejb_A Probable aromatic acid 56.0 17 0.00057 30.8 5.3 43 10-53 3-45 (189)
95 2iz6_A Molybdenum cofactor car 55.5 21 0.00072 29.7 5.8 46 334-379 91-140 (176)
96 3iqw_A Tail-anchored protein t 55.1 76 0.0026 29.3 10.2 40 9-48 16-56 (334)
97 3lyu_A Putative hydrogenase; t 54.5 77 0.0026 24.9 10.2 35 9-46 19-53 (142)
98 3da8_A Probable 5'-phosphoribo 54.4 61 0.0021 27.8 8.7 107 8-149 12-120 (215)
99 3qxc_A Dethiobiotin synthetase 54.0 1.1E+02 0.0038 26.7 10.8 45 106-150 118-171 (242)
100 3av3_A Phosphoribosylglycinami 53.9 1E+02 0.0035 26.3 12.0 106 9-149 4-113 (212)
101 1g63_A Epidermin modifying enz 53.4 11 0.00036 31.7 3.6 40 9-49 3-42 (181)
102 3vot_A L-amino acid ligase, BL 52.8 46 0.0016 31.9 8.7 35 107-143 65-101 (425)
103 3hn2_A 2-dehydropantoate 2-red 51.4 23 0.00077 32.5 5.9 34 8-46 2-35 (312)
104 1id1_A Putative potassium chan 51.3 11 0.00036 30.4 3.3 33 8-45 3-35 (153)
105 1meo_A Phosophoribosylglycinam 51.1 1.1E+02 0.0037 26.1 9.8 107 9-149 1-110 (209)
106 2q6t_A DNAB replication FORK h 50.8 1.1E+02 0.0039 29.3 11.2 43 10-52 202-245 (444)
107 2zts_A Putative uncharacterize 50.8 21 0.00071 31.0 5.5 45 10-54 32-77 (251)
108 3i83_A 2-dehydropantoate 2-red 50.4 23 0.0008 32.5 5.9 41 8-54 2-42 (320)
109 3bul_A Methionine synthase; tr 47.6 33 0.0011 34.5 6.7 48 8-55 98-145 (579)
110 3io3_A DEHA2D07832P; chaperone 46.7 79 0.0027 29.4 8.9 38 9-46 18-58 (348)
111 4e5s_A MCCFLIKE protein (BA_56 46.4 32 0.0011 31.9 6.0 74 292-379 62-137 (331)
112 3s2u_A UDP-N-acetylglucosamine 46.2 41 0.0014 31.5 7.0 27 348-376 92-121 (365)
113 3u7q_B Nitrogenase molybdenum- 46.0 95 0.0032 30.8 9.8 34 108-146 429-469 (523)
114 3mcu_A Dipicolinate synthase, 45.6 25 0.00087 30.1 4.8 39 8-47 5-44 (207)
115 1psw_A ADP-heptose LPS heptosy 45.4 1.8E+02 0.0061 26.5 11.7 89 24-149 201-289 (348)
116 1qzu_A Hypothetical protein MD 45.3 17 0.00058 31.1 3.7 41 8-49 19-60 (206)
117 1qgu_B Protein (nitrogenase mo 44.7 90 0.0031 30.9 9.4 34 108-146 425-465 (519)
118 1v5e_A Pyruvate oxidase; oxido 44.1 91 0.0031 31.4 9.6 79 298-378 8-102 (590)
119 4ds3_A Phosphoribosylglycinami 42.7 77 0.0026 27.1 7.5 110 1-149 5-117 (209)
120 3ujp_A Mn transporter subunit; 42.6 87 0.003 28.5 8.3 34 420-453 140-175 (307)
121 4h1h_A LMO1638 protein; MCCF-l 41.9 40 0.0014 31.1 6.0 73 292-378 62-136 (327)
122 2bln_A Protein YFBG; transfera 41.7 1.2E+02 0.0041 27.6 9.1 39 109-149 67-106 (305)
123 3lp6_A Phosphoribosylaminoimid 41.6 1.5E+02 0.005 24.4 13.6 139 281-453 9-156 (174)
124 2q5c_A NTRC family transcripti 41.6 25 0.00085 29.8 4.2 30 348-380 51-80 (196)
125 3l4e_A Uncharacterized peptida 41.1 50 0.0017 28.1 6.1 46 269-314 18-63 (206)
126 1kjq_A GART 2, phosphoribosylg 41.0 86 0.0029 29.4 8.5 34 8-46 11-44 (391)
127 3to5_A CHEY homolog; alpha(5)b 41.0 1.2E+02 0.0043 23.4 9.3 107 292-431 20-132 (134)
128 3s40_A Diacylglycerol kinase; 40.1 58 0.002 29.6 6.8 67 294-378 25-97 (304)
129 3sz8_A 2-dehydro-3-deoxyphosph 40.0 2.1E+02 0.0071 25.7 12.2 113 300-430 126-270 (285)
130 1pno_A NAD(P) transhydrogenase 40.0 30 0.001 28.2 4.0 34 10-45 25-63 (180)
131 2pju_A Propionate catabolism o 39.6 32 0.0011 29.9 4.6 29 349-380 64-92 (225)
132 1d4o_A NADP(H) transhydrogenas 39.5 31 0.001 28.3 4.0 34 10-45 24-62 (184)
133 1z82_A Glycerol-3-phosphate de 39.4 21 0.00071 33.1 3.6 33 8-45 14-46 (335)
134 3g0o_A 3-hydroxyisobutyrate de 39.1 17 0.00059 33.1 3.0 32 8-44 7-38 (303)
135 1ybh_A Acetolactate synthase, 38.8 1E+02 0.0036 30.9 9.1 29 348-378 75-109 (590)
136 1zl0_A Hypothetical protein PA 38.8 63 0.0022 29.6 6.7 74 292-379 64-139 (311)
137 1t9b_A Acetolactate synthase, 38.7 91 0.0031 32.1 8.6 78 297-378 85-179 (677)
138 3l6d_A Putative oxidoreductase 38.0 18 0.00063 33.0 3.0 38 1-44 3-40 (306)
139 1o4v_A Phosphoribosylaminoimid 37.9 1.7E+02 0.0059 24.2 13.4 140 280-454 14-163 (183)
140 4b4o_A Epimerase family protei 37.8 23 0.00078 31.9 3.6 33 9-45 1-33 (298)
141 3rg8_A Phosphoribosylaminoimid 37.8 1.6E+02 0.0055 23.8 11.7 137 281-453 4-149 (159)
142 2i2c_A Probable inorganic poly 37.6 13 0.00045 33.4 1.9 28 349-378 36-69 (272)
143 3hwr_A 2-dehydropantoate 2-red 37.6 30 0.001 31.8 4.4 31 8-43 19-49 (318)
144 3e9m_A Oxidoreductase, GFO/IDH 37.5 2.4E+02 0.0081 25.6 10.8 110 281-402 8-126 (330)
145 2x7j_A 2-succinyl-5-enolpyruvy 37.5 1.1E+02 0.0038 30.9 9.0 77 297-377 34-127 (604)
146 2vo1_A CTP synthase 1; pyrimid 37.2 37 0.0013 30.3 4.5 40 8-47 22-64 (295)
147 3sr3_A Microcin immunity prote 37.2 53 0.0018 30.5 6.0 74 292-379 63-138 (336)
148 3o1l_A Formyltetrahydrofolate 36.8 2.4E+02 0.0082 25.5 10.7 105 5-149 103-212 (302)
149 2fsv_C NAD(P) transhydrogenase 36.5 35 0.0012 28.5 4.0 34 10-45 48-86 (203)
150 2qyt_A 2-dehydropantoate 2-red 36.1 13 0.00044 34.1 1.6 32 8-44 8-45 (317)
151 2an1_A Putative kinase; struct 35.9 18 0.0006 32.9 2.5 71 295-378 21-95 (292)
152 1djl_A Transhydrogenase DIII; 35.7 37 0.0013 28.5 4.0 34 10-45 47-85 (207)
153 1ozh_A ALS, acetolactate synth 35.7 1.4E+02 0.0046 29.9 9.3 29 348-378 73-107 (566)
154 2vqe_B 30S ribosomal protein S 35.4 75 0.0026 28.1 6.3 34 117-150 156-191 (256)
155 2ixd_A LMBE-related protein; h 35.3 63 0.0021 28.3 5.9 21 104-126 84-104 (242)
156 3ia7_A CALG4; glycosysltransfe 34.9 91 0.0031 29.0 7.6 87 280-376 6-130 (402)
157 3fwz_A Inner membrane protein 34.8 20 0.00068 28.2 2.4 33 8-45 7-39 (140)
158 3pgx_A Carveol dehydrogenase; 34.8 1E+02 0.0035 27.3 7.5 32 10-44 16-47 (280)
159 2qv7_A Diacylglycerol kinase D 34.8 62 0.0021 29.9 6.1 67 295-378 42-114 (337)
160 3tsa_A SPNG, NDP-rhamnosyltran 34.8 60 0.002 30.3 6.2 30 348-379 114-144 (391)
161 2dwc_A PH0318, 433AA long hypo 34.7 2.5E+02 0.0087 26.5 10.8 35 8-47 19-53 (433)
162 1yt5_A Inorganic polyphosphate 34.6 14 0.0005 32.8 1.6 29 348-378 41-72 (258)
163 3llv_A Exopolyphosphatase-rela 34.6 24 0.00084 27.6 2.9 32 9-45 7-38 (141)
164 1pjq_A CYSG, siroheme synthase 34.5 1.5E+02 0.005 28.8 9.0 147 279-453 13-168 (457)
165 3dfu_A Uncharacterized protein 34.5 28 0.00097 30.4 3.4 33 8-45 6-38 (232)
166 1u0t_A Inorganic polyphosphate 34.4 18 0.00061 33.2 2.2 32 345-378 72-107 (307)
167 4da9_A Short-chain dehydrogena 34.3 1.2E+02 0.0041 26.9 7.9 32 10-44 30-61 (280)
168 1bg6_A N-(1-D-carboxylethyl)-L 33.5 29 0.00098 32.3 3.6 32 8-44 4-35 (359)
169 2g1u_A Hypothetical protein TM 33.5 48 0.0016 26.4 4.6 33 8-45 19-51 (155)
170 3h4t_A Glycosyltransferase GTF 33.4 1E+02 0.0035 29.1 7.6 35 281-317 3-37 (404)
171 2bon_A Lipid kinase; DAG kinas 33.4 1.6E+02 0.0056 26.9 8.8 67 295-378 44-118 (332)
172 2r85_A PURP protein PF1517; AT 33.2 41 0.0014 30.8 4.6 33 8-46 2-34 (334)
173 1xrs_B D-lysine 5,6-aminomutas 33.0 41 0.0014 30.0 4.2 46 8-53 120-174 (262)
174 4gbj_A 6-phosphogluconate dehy 32.9 39 0.0013 30.7 4.3 30 9-43 6-35 (297)
175 3kjh_A CO dehydrogenase/acetyl 32.8 29 0.00098 30.1 3.3 36 9-44 1-36 (254)
176 2bru_C NAD(P) transhydrogenase 32.7 35 0.0012 28.0 3.3 34 10-45 32-70 (186)
177 1k99_A Upstream binding factor 32.6 93 0.0032 22.8 5.6 41 415-455 34-76 (99)
178 1lss_A TRK system potassium up 32.5 28 0.00095 26.9 2.9 33 8-45 4-36 (140)
179 1qkk_A DCTD, C4-dicarboxylate 32.4 1.1E+02 0.0038 23.7 6.7 47 369-431 74-120 (155)
180 2uz1_A Benzaldehyde lyase; thi 32.0 76 0.0026 31.8 6.7 30 347-378 65-100 (563)
181 3e18_A Oxidoreductase; dehydro 31.9 2.6E+02 0.0088 25.8 10.1 108 281-402 8-124 (359)
182 1q6z_A BFD, BFDC, benzoylforma 31.7 67 0.0023 31.8 6.2 74 298-376 6-95 (528)
183 3li6_A Calcium-binding protein 31.6 67 0.0023 20.5 4.4 51 413-472 13-63 (66)
184 3ghy_A Ketopantoate reductase 31.6 35 0.0012 31.5 3.8 33 8-45 3-35 (335)
185 3n7t_A Macrophage binding prot 31.5 92 0.0032 27.3 6.4 37 9-45 10-57 (247)
186 3nm9_A HMG-D, high mobility gr 31.5 85 0.0029 21.3 5.0 39 416-454 28-66 (73)
187 1f0y_A HCDH, L-3-hydroxyacyl-C 31.4 32 0.0011 31.3 3.4 32 9-45 16-47 (302)
188 3l7i_A Teichoic acid biosynthe 31.4 23 0.00079 36.9 2.8 118 336-473 603-720 (729)
189 3irs_A Uncharacterized protein 31.3 1.2E+02 0.0041 27.2 7.3 135 293-449 136-280 (291)
190 3nrc_A Enoyl-[acyl-carrier-pro 31.1 73 0.0025 28.3 5.8 42 10-53 27-69 (280)
191 3rfo_A Methionyl-tRNA formyltr 31.0 2.7E+02 0.0094 25.3 9.7 34 8-46 4-37 (317)
192 4hb9_A Similarities with proba 30.9 32 0.0011 32.4 3.5 29 9-42 2-30 (412)
193 2q28_A Oxalyl-COA decarboxylas 30.9 88 0.003 31.3 6.9 30 347-378 69-104 (564)
194 2gk4_A Conserved hypothetical 30.8 37 0.0012 29.7 3.5 20 26-45 33-52 (232)
195 3ego_A Probable 2-dehydropanto 30.7 44 0.0015 30.4 4.3 33 8-46 2-34 (307)
196 1col_A Colicin A; antibacteria 30.3 21 0.00072 30.1 1.8 39 434-475 29-67 (204)
197 3lrx_A Putative hydrogenase; a 30.2 36 0.0012 27.5 3.3 35 9-46 24-58 (158)
198 2x5n_A SPRPN10, 26S proteasome 30.2 1.6E+02 0.0054 24.6 7.4 61 9-71 107-171 (192)
199 3q2i_A Dehydrogenase; rossmann 29.9 2.9E+02 0.01 25.2 10.1 110 280-402 15-134 (354)
200 1qo0_D AMIR; binding protein, 29.7 1.9E+02 0.0066 23.5 8.0 54 363-432 69-125 (196)
201 3hr8_A Protein RECA; alpha and 29.6 2.6E+02 0.009 25.9 9.5 38 10-47 63-100 (356)
202 3pdi_B Nitrogenase MOFE cofact 29.5 37 0.0013 33.1 3.7 34 108-146 366-399 (458)
203 3pnx_A Putative sulfurtransfer 29.4 82 0.0028 25.6 5.2 46 9-54 6-51 (160)
204 4g6h_A Rotenone-insensitive NA 29.1 26 0.0009 34.6 2.6 34 8-46 42-75 (502)
205 3qvl_A Putative hydantoin race 29.0 2.6E+02 0.0089 24.3 8.9 46 97-145 50-96 (245)
206 1wxl_A Single-strand recogniti 28.9 84 0.0029 21.3 4.6 39 416-454 28-66 (73)
207 3s55_A Putative short-chain de 28.8 1.5E+02 0.0051 26.1 7.6 33 10-45 11-43 (281)
208 2hy5_A Putative sulfurtransfer 28.7 71 0.0024 24.7 4.6 26 20-45 15-41 (130)
209 3ty2_A 5'-nucleotidase SURE; s 28.7 57 0.0019 29.0 4.4 40 8-49 11-50 (261)
210 3grc_A Sensor protein, kinase; 28.7 1.7E+02 0.0058 21.9 7.1 109 292-432 14-127 (140)
211 3nxa_A Protein S100-A16; S100 28.6 27 0.00092 25.8 2.0 58 414-475 28-85 (100)
212 3to5_A CHEY homolog; alpha(5)b 28.6 72 0.0025 24.9 4.7 33 118-150 56-97 (134)
213 2ag5_A DHRS6, dehydrogenase/re 28.4 69 0.0024 27.7 5.1 38 1-44 1-38 (246)
214 2lpm_A Two-component response 28.3 52 0.0018 25.3 3.7 34 111-146 47-85 (123)
215 3qha_A Putative oxidoreductase 28.2 30 0.001 31.4 2.6 32 8-44 15-46 (296)
216 1o97_C Electron transferring f 28.1 66 0.0023 28.6 4.8 41 107-149 102-148 (264)
217 4dll_A 2-hydroxy-3-oxopropiona 27.9 63 0.0022 29.5 4.9 32 8-44 31-62 (320)
218 2pju_A Propionate catabolism o 27.8 1.1E+02 0.0038 26.4 6.1 27 118-147 153-179 (225)
219 3db2_A Putative NADPH-dependen 27.8 2E+02 0.0069 26.4 8.5 109 281-402 8-125 (354)
220 3tl4_X Glutaminyl-tRNA synthet 27.5 46 0.0016 27.9 3.4 67 383-469 102-175 (187)
221 2c31_A Oxalyl-COA decarboxylas 27.5 1.1E+02 0.0037 30.6 6.9 30 347-378 71-106 (568)
222 1xmp_A PURE, phosphoribosylami 27.5 2.5E+02 0.0086 22.9 13.3 146 279-456 11-165 (170)
223 1ks9_A KPA reductase;, 2-dehyd 27.4 46 0.0016 29.6 3.8 32 9-45 1-32 (291)
224 2crj_A SWI/SNF-related matrix- 27.4 1.4E+02 0.0048 21.3 5.8 39 416-454 32-72 (92)
225 3f67_A Putative dienelactone h 27.3 79 0.0027 26.5 5.3 38 8-45 31-68 (241)
226 3oec_A Carveol dehydrogenase ( 27.3 1.6E+02 0.0054 26.7 7.5 32 10-44 47-78 (317)
227 3cky_A 2-hydroxymethyl glutara 27.2 64 0.0022 29.0 4.8 32 8-44 4-35 (301)
228 1ydh_A AT5G11950; structural g 27.1 2.9E+02 0.01 23.5 9.0 44 334-378 89-143 (216)
229 2pan_A Glyoxylate carboligase; 27.1 2.1E+02 0.0073 28.8 9.1 79 297-377 30-124 (616)
230 2lnd_A De novo designed protei 27.0 70 0.0024 22.2 3.6 48 369-431 50-100 (112)
231 2ehd_A Oxidoreductase, oxidore 26.9 73 0.0025 27.2 4.9 32 11-45 7-38 (234)
232 1hme_A High mobility group pro 26.8 1.3E+02 0.0044 20.5 5.3 39 416-454 31-71 (77)
233 4e5v_A Putative THUA-like prot 26.7 74 0.0025 28.6 5.0 37 8-45 4-43 (281)
234 1efv_B Electron transfer flavo 26.7 73 0.0025 28.2 4.8 41 107-149 106-152 (255)
235 1rh1_A Colicin B; FEPA, cytoto 26.7 30 0.001 33.0 2.3 39 434-475 339-377 (511)
236 3tla_A MCCF; serine protease, 26.7 75 0.0026 29.9 5.1 74 292-379 93-168 (371)
237 3icc_A Putative 3-oxoacyl-(acy 26.5 2.7E+02 0.0093 23.7 8.8 32 10-44 8-39 (255)
238 3lq1_A 2-succinyl-5-enolpyruvy 26.1 1.5E+02 0.0052 29.6 7.7 76 298-377 15-107 (578)
239 3rkr_A Short chain oxidoreduct 25.9 1.5E+02 0.005 25.9 6.9 33 10-45 30-62 (262)
240 4fzr_A SSFS6; structural genom 25.9 1E+02 0.0036 28.7 6.2 35 281-317 18-52 (398)
241 3bbn_B Ribosomal protein S2; s 25.7 3.2E+02 0.011 23.6 9.3 32 118-149 156-189 (231)
242 2hmt_A YUAA protein; RCK, KTN, 25.6 35 0.0012 26.4 2.3 32 9-45 7-38 (144)
243 3tjr_A Short chain dehydrogena 25.6 1.6E+02 0.0054 26.4 7.1 33 10-45 32-64 (301)
244 3pxx_A Carveol dehydrogenase; 25.5 2E+02 0.0067 25.3 7.7 32 10-44 11-42 (287)
245 2hy5_B Intracellular sulfur ox 25.4 69 0.0024 25.1 4.0 33 14-46 12-46 (136)
246 4eg0_A D-alanine--D-alanine li 25.4 1E+02 0.0035 27.9 5.8 38 8-45 13-54 (317)
247 2lse_A Four helix bundle prote 31.1 15 0.00051 25.1 0.0 37 438-475 26-62 (101)
248 3is3_A 17BETA-hydroxysteroid d 25.2 1.9E+02 0.0064 25.3 7.5 32 10-44 19-50 (270)
249 3hww_A 2-succinyl-5-enolpyruvy 25.1 1.8E+02 0.0061 29.0 8.0 76 298-377 12-104 (556)
250 1efp_B ETF, protein (electron 25.0 72 0.0025 28.2 4.4 41 107-149 103-149 (252)
251 1z7e_A Protein aRNA; rossmann 24.8 1.6E+02 0.0054 30.0 7.7 39 109-149 67-106 (660)
252 2raf_A Putative dinucleotide-b 24.7 61 0.0021 27.5 3.9 33 8-45 19-51 (209)
253 1iow_A DD-ligase, DDLB, D-ALA\ 24.7 1E+02 0.0035 27.5 5.7 38 8-45 2-43 (306)
254 1dhr_A Dihydropteridine reduct 24.7 81 0.0028 27.2 4.8 40 1-45 1-40 (241)
255 3c24_A Putative oxidoreductase 24.4 63 0.0022 28.9 4.1 31 9-44 12-43 (286)
256 3ksu_A 3-oxoacyl-acyl carrier 24.3 1.6E+02 0.0054 25.7 6.7 32 10-44 12-43 (262)
257 3qrx_B Melittin; calcium-bindi 24.3 22 0.00074 18.5 0.5 18 359-376 1-18 (26)
258 3uhj_A Probable glycerol dehyd 24.1 92 0.0031 29.5 5.3 89 269-379 44-139 (387)
259 2fb6_A Conserved hypothetical 24.1 83 0.0028 23.9 4.1 38 8-45 7-48 (117)
260 3trh_A Phosphoribosylaminoimid 24.0 2.9E+02 0.01 22.5 12.5 143 280-454 7-158 (169)
261 2gez_A L-asparaginase alpha su 24.0 1.5E+02 0.0052 24.9 6.0 35 439-473 30-64 (195)
262 3obb_A Probable 3-hydroxyisobu 23.8 67 0.0023 29.2 4.2 30 10-44 5-34 (300)
263 2wvg_A PDC, pyruvate decarboxy 23.8 1.8E+02 0.0061 29.0 7.7 28 351-378 66-99 (568)
264 1ckt_A High mobility group 1 p 23.7 1.6E+02 0.0053 19.6 5.2 36 419-454 31-68 (71)
265 4feg_A Pyruvate oxidase; carba 23.6 2.4E+02 0.0083 28.3 8.7 29 347-377 74-108 (603)
266 4hkt_A Inositol 2-dehydrogenas 23.5 4.1E+02 0.014 23.9 11.1 108 281-402 6-122 (331)
267 1z0s_A Probable inorganic poly 23.5 71 0.0024 28.7 4.1 55 297-378 42-99 (278)
268 3eag_A UDP-N-acetylmuramate:L- 23.4 74 0.0025 29.2 4.4 33 8-44 4-36 (326)
269 3euw_A MYO-inositol dehydrogen 23.3 4.2E+02 0.014 24.0 11.7 109 281-402 7-124 (344)
270 1jx7_A Hypothetical protein YC 23.3 1.2E+02 0.0041 22.5 5.0 28 19-46 15-44 (117)
271 2w36_A Endonuclease V; hypoxan 23.3 84 0.0029 27.2 4.3 39 108-146 92-137 (225)
272 2f6k_A Metal-dependent hydrola 23.2 3.9E+02 0.013 23.5 10.1 47 267-316 107-156 (307)
273 1p9o_A Phosphopantothenoylcyst 23.2 48 0.0017 30.4 3.0 21 26-46 69-89 (313)
274 3ll8_B Calcineurin subunit B t 23.2 68 0.0023 24.8 3.7 57 414-474 89-145 (155)
275 3n0v_A Formyltetrahydrofolate 23.1 4E+02 0.014 23.8 10.7 107 5-149 88-197 (286)
276 2vpq_A Acetyl-COA carboxylase; 23.1 2.9E+02 0.0098 26.4 8.9 31 10-45 3-33 (451)
277 3g17_A Similar to 2-dehydropan 22.9 24 0.00082 32.0 0.9 33 8-45 2-34 (294)
278 3op4_A 3-oxoacyl-[acyl-carrier 22.9 1.1E+02 0.0037 26.5 5.3 34 9-45 9-42 (248)
279 1zco_A 2-dehydro-3-deoxyphosph 22.8 3.9E+02 0.013 23.5 12.7 60 369-430 191-256 (262)
280 2e6o_A HMG box-containing prot 22.8 1.3E+02 0.0044 21.2 4.8 38 416-453 42-81 (87)
281 3l4b_C TRKA K+ channel protien 22.8 31 0.0011 29.5 1.6 31 10-45 2-32 (218)
282 1k2x_A Putative L-asparaginase 22.7 1.7E+02 0.0059 24.1 6.0 35 439-473 27-61 (177)
283 3ic5_A Putative saccharopine d 22.7 62 0.0021 23.8 3.2 32 9-45 6-38 (118)
284 1zi8_A Carboxymethylenebutenol 22.6 1.1E+02 0.0038 25.5 5.3 38 8-45 27-64 (236)
285 2ew2_A 2-dehydropantoate 2-red 22.5 58 0.002 29.4 3.5 31 9-44 4-34 (316)
286 1txg_A Glycerol-3-phosphate de 22.5 63 0.0022 29.5 3.8 31 9-44 1-31 (335)
287 4gkb_A 3-oxoacyl-[acyl-carrier 22.5 2.2E+02 0.0074 25.0 7.2 33 10-45 8-40 (258)
288 3afo_A NADH kinase POS5; alpha 22.4 45 0.0015 31.7 2.7 35 342-378 108-147 (388)
289 1spx_A Short-chain reductase f 22.2 98 0.0033 27.3 4.9 39 1-45 1-39 (278)
290 3edm_A Short chain dehydrogena 22.2 2E+02 0.0069 24.9 7.0 32 10-44 9-40 (259)
291 3g1w_A Sugar ABC transporter; 22.1 3.9E+02 0.014 23.3 11.2 86 4-146 1-92 (305)
292 3u5t_A 3-oxoacyl-[acyl-carrier 21.9 1.3E+02 0.0045 26.4 5.7 33 9-44 27-59 (267)
293 3eod_A Protein HNR; response r 21.9 1.8E+02 0.0063 21.4 6.0 38 1-43 1-38 (130)
294 1mio_B Nitrogenase molybdenum 21.9 84 0.0029 30.5 4.7 34 108-146 376-409 (458)
295 2r6j_A Eugenol synthase 1; phe 21.7 84 0.0029 28.3 4.5 33 10-46 13-45 (318)
296 3u7q_A Nitrogenase molybdenum- 21.7 66 0.0022 31.7 3.8 35 107-146 407-441 (492)
297 3rd5_A Mypaa.01249.C; ssgcid, 21.6 1E+02 0.0034 27.5 4.9 33 10-45 17-49 (291)
298 2vbi_A Pyruvate decarboxylase; 21.6 1.7E+02 0.0058 29.1 7.0 28 351-378 66-99 (566)
299 2d1y_A Hypothetical protein TT 21.6 97 0.0033 27.0 4.7 39 1-45 1-39 (256)
300 4fs3_A Enoyl-[acyl-carrier-pro 21.5 3.2E+02 0.011 23.6 8.2 40 1-44 1-40 (256)
301 3nvt_A 3-deoxy-D-arabino-heptu 21.5 5.1E+02 0.017 24.3 11.9 126 281-430 228-375 (385)
302 2pd4_A Enoyl-[acyl-carrier-pro 21.4 1.1E+02 0.0038 26.9 5.1 34 10-45 7-41 (275)
303 1eyh_A Epsin; superhelix of he 21.3 92 0.0031 24.8 3.9 35 417-451 107-141 (144)
304 2dpo_A L-gulonate 3-dehydrogen 21.3 61 0.0021 29.8 3.3 33 8-45 6-38 (319)
305 3ol3_A Putative uncharacterize 21.2 2.6E+02 0.0089 20.9 6.9 71 331-452 25-97 (107)
306 1hry_A Human SRY; DNA, DNA-bin 21.2 1.2E+02 0.0042 20.6 4.2 38 416-453 29-68 (76)
307 3kkj_A Amine oxidase, flavin-c 21.2 52 0.0018 28.3 2.9 29 10-43 4-32 (336)
308 3gg2_A Sugar dehydrogenase, UD 21.2 65 0.0022 31.3 3.6 32 9-45 3-34 (450)
309 2c5m_A CTP synthase; cytidine 21.0 62 0.0021 28.7 3.0 38 8-45 22-62 (294)
310 2c29_D Dihydroflavonol 4-reduc 21.0 56 0.0019 29.8 3.1 37 1-44 1-37 (337)
311 3rsc_A CALG2; TDP, enediyne, s 21.0 1.9E+02 0.0065 27.0 7.0 36 280-317 22-57 (415)
312 3dtt_A NADP oxidoreductase; st 20.9 76 0.0026 27.6 3.8 33 8-45 19-51 (245)
313 1s8n_A Putative antiterminator 20.9 3.4E+02 0.012 22.0 10.1 107 292-431 21-130 (205)
314 4ezb_A Uncharacterized conserv 20.9 50 0.0017 30.2 2.7 33 8-45 24-57 (317)
315 4eto_A Protein S100-A4; calciu 20.9 59 0.002 23.4 2.5 55 415-475 27-83 (93)
316 3zzm_A Bifunctional purine bio 20.9 1.7E+02 0.0059 28.6 6.4 42 8-54 9-50 (523)
317 1byi_A Dethiobiotin synthase; 20.7 1.1E+02 0.0037 25.9 4.7 32 11-42 4-36 (224)
318 3k96_A Glycerol-3-phosphate de 20.6 57 0.002 30.5 3.0 33 8-45 29-61 (356)
319 1xgw_A Epsin 4; ENTH, enthopro 20.4 46 0.0016 27.6 2.0 36 416-451 136-171 (176)
320 2wm8_A MDP-1, magnesium-depend 20.4 3.4E+02 0.012 21.8 8.2 91 25-148 73-165 (187)
321 3otg_A CALG1; calicheamicin, T 20.4 2.4E+02 0.0081 26.2 7.6 31 348-380 130-161 (412)
322 1i36_A Conserved hypothetical 20.4 72 0.0025 28.0 3.6 30 9-43 1-30 (264)
323 2a4k_A 3-oxoacyl-[acyl carrier 20.3 1.1E+02 0.0036 26.9 4.7 39 1-45 1-39 (263)
324 3bfv_A CAPA1, CAPB2, membrane 20.2 1.1E+02 0.0037 27.2 4.7 38 8-45 81-120 (271)
325 3sbx_A Putative uncharacterize 20.2 1.5E+02 0.005 24.8 5.1 37 8-45 13-53 (189)
326 3jte_A Response regulator rece 20.1 2.8E+02 0.0095 20.7 7.0 47 369-431 76-122 (143)
327 3v2h_A D-beta-hydroxybutyrate 20.1 2.3E+02 0.008 24.9 7.0 32 10-44 26-57 (281)
328 4fbl_A LIPS lipolytic enzyme; 20.0 69 0.0024 28.2 3.4 34 11-45 54-87 (281)
No 1
>3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A*
Probab=100.00 E-value=1e-67 Score=526.29 Aligned_cols=426 Identities=27% Similarity=0.425 Sum_probs=343.1
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHHCC--CeEEEEeCCcchhhhhhHhhhcccCCCceEEEEeeCCCcccCCCCCCCC
Q 039701 8 QLHFILFPFLAQGHMIPMIDIARLLAQHG--ALVTIVTTPMNAARFQNVIERGIQSGLRIQVIEFYFPCQEVGLPEGCES 85 (476)
Q Consensus 8 ~~~vl~~~~p~~GHv~P~l~La~~L~~rG--H~Vt~~~~~~~~~~~~~~~~~~~~~g~~i~~~~i~~~~~~~~~~~~~~~ 85 (476)
++||+++|+|++||++|++.||+.|++|| +.|||++++.+...+.+... ....+++|+.+| ++++++.+.
T Consensus 13 ~~hvv~~P~p~~GHi~P~l~Lak~L~~~g~~~~vT~~~t~~~~~~~~~~~~---~~~~~i~~~~ip-----dglp~~~~~ 84 (454)
T 3hbf_A 13 LLHVAVLAFPFGTHAAPLLSLVKKIATEAPKVTFSFFCTTTTNDTLFSRSN---EFLPNIKYYNVH-----DGLPKGYVS 84 (454)
T ss_dssp CCEEEEECCCSSSSHHHHHHHHHHHHHHCTTSEEEEEECHHHHHHSCSSSS---CCCTTEEEEECC-----CCCCTTCCC
T ss_pred CCEEEEEcCCcccHHHHHHHHHHHHHhCCCCEEEEEEeCHHHHHhhhcccc---cCCCCceEEecC-----CCCCCCccc
Confidence 68999999999999999999999999999 99999999866554433210 113469999987 467776554
Q ss_pred CCCCCCcCcHHHHHHHHH-HchHHHHHHHHhcCCCCeEEEecCCCchhHHHHhHcCCCcEEEecchHHHHHHHhhhhccc
Q 039701 86 WDKLPSMALLPKFFAAIE-MLRLPLETLFKEIQPKPGCLISDVCLPWTVSSACKFNVPRIVFHGFSCFCLLCLHSLSVSK 164 (476)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~-~~~~~l~~~l~~~~~~~D~vI~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~ 164 (476)
... ....+..+..... .+.+.+++++++.+.++||||+|.+++|+..+|+++|||++.|++++++.++.+++.+...
T Consensus 85 ~~~--~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iI~D~~~~w~~~vA~~lgIP~~~f~t~~a~~~~~~~~~~~~~ 162 (454)
T 3hbf_A 85 SGN--PREPIFLFIKAMQENFKHVIDEAVAETGKNITCLVTDAFFWFGADLAEEMHAKWVPLWTAGPHSLLTHVYTDLIR 162 (454)
T ss_dssp CSC--TTHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEETTCTTHHHHHHHTTCEEEEEECSCHHHHHHHHTHHHHH
T ss_pred cCC--hHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcEEEECCcchHHHHHHHHhCCCEEEEeCccHHHHHHHHhhHHHH
Confidence 432 1133444444433 3455556555543468999999999999999999999999999999999998888765322
Q ss_pred cCCC---CCCCCcccccCCCCCcccccccccchhhh------HHHhHHHHHHhhccccEEEecchhhcCHHHHHHHHhcc
Q 039701 165 AHES---VSSDSEYFLVPGLPDRVEITKAQLPEILK------LKSFGEPILAAEMASYGVIVNSFEELEPAYVEEYKNAR 235 (476)
Q Consensus 165 ~~~~---~~~~~~~~~~Pg~~~~~~~~~~~l~~~~~------~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~ 235 (476)
.... .........+||+|. +..++++..+. +.+++.+..+...+++++++||+++||+++++.++..+
T Consensus 163 ~~~~~~~~~~~~~~~~iPg~p~---~~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~ns~~eLE~~~~~~~~~~~ 239 (454)
T 3hbf_A 163 EKTGSKEVHDVKSIDVLPGFPE---LKASDLPEGVIKDIDVPFATMLHKMGLELPRANAVAINSFATIHPLIENELNSKF 239 (454)
T ss_dssp HTCCHHHHTTSSCBCCSTTSCC---BCGGGSCTTSSSCTTSHHHHHHHHHHHHGGGSSCEEESSCGGGCHHHHHHHHTTS
T ss_pred hhcCCCccccccccccCCCCCC---cChhhCchhhccCCchHHHHHHHHHHHhhccCCEEEECChhHhCHHHHHHHHhcC
Confidence 1100 011122335899975 67777776532 45566667777788999999999999999999998776
Q ss_pred CCceEEeCcccCCCCCcccccccCCCCCCCcccccccccCCCCCceEEEecCCcccCCHHHHHHHHHHHHhCCCCeEEEE
Q 039701 236 DGKVWCVGPVSLCNKEDMDKLERGDKTSNDGSGCLKWLDSWQPGSAVYVCLGSLCDCSTRQLIELGLGLEATKKPFIWVI 315 (476)
Q Consensus 236 ~~~v~~vGpl~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~GS~~~~~~~~~~~i~~a~~~~~~~~i~~~ 315 (476)
+++++|||++....... ...+.++.+||+.+++++||||||||+...+.+++.+++.++++.+++|||++
T Consensus 240 -~~v~~vGPl~~~~~~~~---------~~~~~~~~~wLd~~~~~~vVyvsfGS~~~~~~~~~~el~~~l~~~~~~flw~~ 309 (454)
T 3hbf_A 240 -KLLLNVGPFNLTTPQRK---------VSDEHGCLEWLDQHENSSVVYISFGSVVTPPPHELTALAESLEECGFPFIWSF 309 (454)
T ss_dssp -SCEEECCCHHHHSCCSC---------CCCTTCHHHHHHTSCTTCEEEEECCSSCCCCHHHHHHHHHHHHHHCCCEEEEC
T ss_pred -CCEEEECCccccccccc---------ccchHHHHHHHhcCCCCceEEEecCCCCcCCHHHHHHHHHHHHhCCCeEEEEe
Confidence 79999999976432110 01256799999999888999999999999889999999999999999999999
Q ss_pred cCCCC--CchhHHHHhcCCCeEeeccccHHHhhhCCCceeeecccChhhHHHHHHcCCCEecccccccchhhHHHHHHh-
Q 039701 316 RPGDQ--AFEKFEERIEGRGLLIRGWAPQVVILSHPAIGGFLTHCGWNSVLEAVSNGLPMVTWPFFADQFCNEKLVVQV- 392 (476)
Q Consensus 316 ~~~~~--~~~~~~~~~~~~nv~~~~~vpq~~ll~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~~a~~v~e~- 392 (476)
+.... .++++.++. ++|+++.+|+||.++|+|+++++||||||+||++|++++|||||++|++.||+.||++++ +
T Consensus 310 ~~~~~~~lp~~~~~~~-~~~~~vv~w~Pq~~vL~h~~v~~fvtH~G~~S~~Eal~~GvP~i~~P~~~DQ~~Na~~v~-~~ 387 (454)
T 3hbf_A 310 RGDPKEKLPKGFLERT-KTKGKIVAWAPQVEILKHSSVGVFLTHSGWNSVLECIVGGVPMISRPFFGDQGLNTILTE-SV 387 (454)
T ss_dssp CSCHHHHSCTTHHHHT-TTTEEEESSCCHHHHHHSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHH-TT
T ss_pred CCcchhcCCHhHHhhc-CCceEEEeeCCHHHHHhhcCcCeEEecCCcchHHHHHHcCCCEecCcccccHHHHHHHHH-Hh
Confidence 87531 255666654 679999999999999999998889999999999999999999999999999999999995 7
Q ss_pred hcceEEeccCCCCCCcccccCCcccchhHHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHH
Q 039701 393 LRIGVTIGAERPPSLADEERNGVPVKKEDVKKAINMLMDEGEERDERRRRAREYGETAKTAIEEGGSSYLNIKLLIKDIL 472 (476)
Q Consensus 393 ~g~G~~l~~~~~~~~~~~~~~~~~~t~~~l~~~i~~ll~~~~~~~~~r~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~i~ 472 (476)
+|+|+.++.. .+++++|+++|+++|+| +++++||+||+++++++++++.+||||.+++++|+++|.
T Consensus 388 ~g~Gv~l~~~-------------~~~~~~l~~av~~ll~~-~~~~~~r~~a~~l~~~~~~a~~~gGsS~~~l~~~v~~i~ 453 (454)
T 3hbf_A 388 LEIGVGVDNG-------------VLTKESIKKALELTMSS-EKGGIMRQKIVKLKESAFKAVEQNGTSAMDFTTLIQIVT 453 (454)
T ss_dssp SCSEEECGGG-------------SCCHHHHHHHHHHHHSS-HHHHHHHHHHHHHHHHHHHHTSTTSHHHHHHHHHHHHHT
T ss_pred hCeeEEecCC-------------CCCHHHHHHHHHHHHCC-ChHHHHHHHHHHHHHHHHHhhccCCCHHHHHHHHHHHHh
Confidence 6999999765 69999999999999985 677899999999999999999999999999999999874
No 2
>2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10
Probab=100.00 E-value=1.3e-62 Score=499.42 Aligned_cols=445 Identities=29% Similarity=0.539 Sum_probs=322.9
Q ss_pred CCCCCCCCcEEEEEcCCCccChHHHHHHHHHHHHCCCeEEEEeCCcchhhhhhHhhhcccCC-CceEEEEeeCCCcccCC
Q 039701 1 MASQAGSQLHFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTTPMNAARFQNVIERGIQSG-LRIQVIEFYFPCQEVGL 79 (476)
Q Consensus 1 m~~~~~~~~~vl~~~~p~~GHv~P~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~g-~~i~~~~i~~~~~~~~~ 79 (476)
|+.-+++++||+++|+|++||++|++.||++|++|||+|||++++.+.+.+.+........+ .+++|+.++ +++
T Consensus 1 ~~~~~~~~~~vl~~p~p~~GHi~P~l~La~~L~~rG~~VT~v~t~~~~~~~~~~~~~~~~~~~~~i~~~~l~-----~~l 75 (482)
T 2pq6_A 1 MGNFANRKPHVVMIPYPVQGHINPLFKLAKLLHLRGFHITFVNTEYNHKRLLKSRGPKAFDGFTDFNFESIP-----DGL 75 (482)
T ss_dssp -------CCEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEEEHHHHHHHC------------CEEEEEEC-----CCC
T ss_pred CCcccCCCCEEEEecCccchhHHHHHHHHHHHHhCCCeEEEEeCCchhhhhccccccccccCCCceEEEECC-----CCC
Confidence 55544437899999999999999999999999999999999999877665544311100011 268999887 234
Q ss_pred CCCCCCCCCCCCcCcHHHHHHHH-HHchHHHHHHHHhc-----CCCCeEEEecCCCchhHHHHhHcCCCcEEEecchHHH
Q 039701 80 PEGCESWDKLPSMALLPKFFAAI-EMLRLPLETLFKEI-----QPKPGCLISDVCLPWTVSSACKFNVPRIVFHGFSCFC 153 (476)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~l~~~-----~~~~D~vI~D~~~~~~~~~A~~~giP~v~~~~~~~~~ 153 (476)
+....... . . ..+..+...+ ..+...++++++++ ..++|+||+|.++.|+..+|+++|||++.++++++..
T Consensus 76 p~~~~~~~-~-~-~~~~~~~~~~~~~~~~~l~~ll~~l~~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~ 152 (482)
T 2pq6_A 76 TPMEGDGD-V-S-QDVPTLCQSVRKNFLKPYCELLTRLNHSTNVPPVTCLVSDCCMSFTIQAAEEFELPNVLYFSSSACS 152 (482)
T ss_dssp C------------CCHHHHHHHHTTSSHHHHHHHHHHHHTCSSSCCCCEEEEETTCTHHHHHHHHTTCCEEEEECSCHHH
T ss_pred CCcccccC-c-c-hhHHHHHHHHHHHhhHHHHHHHHHHhhhccCCCceEEEECCcchhHHHHHHHcCCCEEEEecccHHH
Confidence 44110001 0 1 1233344444 45566677777653 2589999999999999999999999999999999887
Q ss_pred HHHHhhhhcc---ccCCCCC----C----CCcccccCCCCCcccccccccchhhh-------HHHhHHHHHHhhccccEE
Q 039701 154 LLCLHSLSVS---KAHESVS----S----DSEYFLVPGLPDRVEITKAQLPEILK-------LKSFGEPILAAEMASYGV 215 (476)
Q Consensus 154 ~~~~~~~~~~---~~~~~~~----~----~~~~~~~Pg~~~~~~~~~~~l~~~~~-------~~~~~~~~~~~~~~~~~~ 215 (476)
+..+.+.+.. .+..... . ......+|+++. +...+++.++. +.+++.+..+...+++.+
T Consensus 153 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 229 (482)
T 2pq6_A 153 LLNVMHFRSFVERGIIPFKDESYLTNGCLETKVDWIPGLKN---FRLKDIVDFIRTTNPNDIMLEFFIEVADRVNKDTTI 229 (482)
T ss_dssp HHHHTTHHHHHHTTCSSCSSGGGGTSSGGGCBCCSSTTCCS---CBGGGSCGGGCCSCTTCHHHHHHHHHHHTCCTTCCE
T ss_pred HHHHHHHHHHHhcCCCCCccccccccccccCccccCCCCCC---CchHHCchhhccCCcccHHHHHHHHHHHhhccCCEE
Confidence 7665543321 1111000 0 011123566653 33334443321 233334455566778899
Q ss_pred EecchhhcCHHHHHHHHhccCCceEEeCcccCC-CCCcccccccC--CCCCCCcccccccccCCCCCceEEEecCCcccC
Q 039701 216 IVNSFEELEPAYVEEYKNARDGKVWCVGPVSLC-NKEDMDKLERG--DKTSNDGSGCLKWLDSWQPGSAVYVCLGSLCDC 292 (476)
Q Consensus 216 l~~~~~~l~~~~~~~~~~~~~~~v~~vGpl~~~-~~~~~~~~~~~--~~~~~~~~~l~~~l~~~~~~~vv~vs~GS~~~~ 292 (476)
++|++++||+++++.++..+ +++++|||+... +........+. ...+..+.++.+||+.++++++|||||||....
T Consensus 230 l~nt~~~le~~~~~~~~~~~-~~v~~VGPl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~wld~~~~~~vv~vs~GS~~~~ 308 (482)
T 2pq6_A 230 LLNTFNELESDVINALSSTI-PSIYPIGPLPSLLKQTPQIHQLDSLDSNLWKEDTECLDWLESKEPGSVVYVNFGSTTVM 308 (482)
T ss_dssp EESSCGGGGHHHHHHHHTTC-TTEEECCCHHHHHHTSTTGGGGCC---------CHHHHHHTTSCTTCEEEEECCSSSCC
T ss_pred EEcChHHHhHHHHHHHHHhC-CcEEEEcCCcccccccccccccccccccccccchHHHHHHhcCCCCceEEEecCCcccC
Confidence 99999999999999999887 899999999753 11100000000 011112456899999988888999999999888
Q ss_pred CHHHHHHHHHHHHhCCCCeEEEEcCCC----C--CchhHHHHhcCCCeEeeccccHHHhhhCCCceeeecccChhhHHHH
Q 039701 293 STRQLIELGLGLEATKKPFIWVIRPGD----Q--AFEKFEERIEGRGLLIRGWAPQVVILSHPAIGGFLTHCGWNSVLEA 366 (476)
Q Consensus 293 ~~~~~~~i~~a~~~~~~~~i~~~~~~~----~--~~~~~~~~~~~~nv~~~~~vpq~~ll~~~~~~~~I~HgG~~s~~ea 366 (476)
+.+++.++++++++.+++|||+++... . .++++.++. ++|+++.+|+||.++|+|+++++||||||+||++||
T Consensus 309 ~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~-~~~~~v~~~~pq~~~L~h~~~~~~vth~G~~s~~Ea 387 (482)
T 2pq6_A 309 TPEQLLEFAWGLANCKKSFLWIIRPDLVIGGSVIFSSEFTNEI-ADRGLIASWCPQDKVLNHPSIGGFLTHCGWNSTTES 387 (482)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEECCGGGSTTTGGGSCHHHHHHH-TTTEEEESCCCHHHHHTSTTEEEEEECCCHHHHHHH
T ss_pred CHHHHHHHHHHHHhcCCcEEEEEcCCccccccccCcHhHHHhc-CCCEEEEeecCHHHHhcCCCCCEEEecCCcchHHHH
Confidence 888899999999999999999997542 0 255665554 789999999999999999999999999999999999
Q ss_pred HHcCCCEecccccccchhhHHHHHHhhcceEEeccCCCCCCcccccCCcccchhHHHHHHHHHhcCChhhHHHHHHHHHH
Q 039701 367 VSNGLPMVTWPFFADQFCNEKLVVQVLRIGVTIGAERPPSLADEERNGVPVKKEDVKKAINMLMDEGEERDERRRRAREY 446 (476)
Q Consensus 367 l~~GvP~l~~P~~~DQ~~~a~~v~e~~g~G~~l~~~~~~~~~~~~~~~~~~t~~~l~~~i~~ll~~~~~~~~~r~~a~~l 446 (476)
+++|||||++|++.||+.||+++++++|+|+.++ . .+++++|+++|+++|+|++ +++||+||+++
T Consensus 388 l~~GvP~i~~P~~~dQ~~na~~~~~~~G~g~~l~-~-------------~~~~~~l~~~i~~ll~~~~-~~~~r~~a~~l 452 (482)
T 2pq6_A 388 ICAGVPMLCWPFFADQPTDCRFICNEWEIGMEID-T-------------NVKREELAKLINEVIAGDK-GKKMKQKAMEL 452 (482)
T ss_dssp HHHTCCEEECCCSTTHHHHHHHHHHTSCCEEECC-S-------------SCCHHHHHHHHHHHHTSHH-HHHHHHHHHHH
T ss_pred HHcCCCEEecCcccchHHHHHHHHHHhCEEEEEC-C-------------CCCHHHHHHHHHHHHcCCc-HHHHHHHHHHH
Confidence 9999999999999999999999954799999997 4 5999999999999998754 67899999999
Q ss_pred HHHHHHHHhhCCChHHHHHHHHHHHHH
Q 039701 447 GETAKTAIEEGGSSYLNIKLLIKDILQ 473 (476)
Q Consensus 447 ~~~~~~~~~~gg~~~~~~~~~~~~i~~ 473 (476)
++.+++++.+||++.+++++|+++|..
T Consensus 453 ~~~~~~a~~~gGss~~~l~~~v~~~~~ 479 (482)
T 2pq6_A 453 KKKAEENTRPGGCSYMNLNKVIKDVLL 479 (482)
T ss_dssp HHHHHHHTSTTCHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHhcCCcHHHHHHHHHHHHHh
Confidence 999999999999999999999998753
No 3
>2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A*
Probab=100.00 E-value=3.3e-61 Score=487.54 Aligned_cols=430 Identities=28% Similarity=0.447 Sum_probs=320.8
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHHC-CCeEEEEeCCcc--hhhhhhHhhhcccCCCceEEEEeeCCCcccCCCCCCC
Q 039701 8 QLHFILFPFLAQGHMIPMIDIARLLAQH-GALVTIVTTPMN--AARFQNVIERGIQSGLRIQVIEFYFPCQEVGLPEGCE 84 (476)
Q Consensus 8 ~~~vl~~~~p~~GHv~P~l~La~~L~~r-GH~Vt~~~~~~~--~~~~~~~~~~~~~~g~~i~~~~i~~~~~~~~~~~~~~ 84 (476)
++||+|+|+|++||++|++.||++|++| ||+|||++++.. ...+.+... ....+++|+.++... .++.
T Consensus 6 ~~~vl~~p~p~~GHv~P~l~La~~L~~r~Gh~Vt~~t~~~~~~~~~~~~~~~---~~~~~i~~~~l~~~~----~~~~-- 76 (480)
T 2vch_A 6 TPHVAIIPSPGMGHLIPLVEFAKRLVHLHGLTVTFVIAGEGPPSKAQRTVLD---SLPSSISSVFLPPVD----LTDL-- 76 (480)
T ss_dssp CCEEEEECCSCHHHHHHHHHHHHHHHHHHCCEEEEEECCSSSCC-CHHHHHC----CCTTEEEEECCCCC----CTTS--
T ss_pred CcEEEEecCcchhHHHHHHHHHHHHHhCCCCEEEEEECCCcchhhhhhhhcc---ccCCCceEEEcCCCC----CCCC--
Confidence 5799999999999999999999999998 999999998863 344443211 002369999887431 1111
Q ss_pred CCCCCCCcCcHHHHHHHHHHchHHHHHHHHhc--CCCC-eEEEecCCCchhHHHHhHcCCCcEEEecchHHHHHHHhhhh
Q 039701 85 SWDKLPSMALLPKFFAAIEMLRLPLETLFKEI--QPKP-GCLISDVCLPWTVSSACKFNVPRIVFHGFSCFCLLCLHSLS 161 (476)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~--~~~~-D~vI~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~ 161 (476)
. ...+....+..........++++++++ ..++ |+||+|.++.|+..+|+++|||++.++++++..++.+++++
T Consensus 77 -~---~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~~~pd~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~ 152 (480)
T 2vch_A 77 -S---SSTRIESRISLTVTRSNPELRKVFDSFVEGGRLPTALVVDLFGTDAFDVAVEFHVPPYIFYPTTANVLSFFLHLP 152 (480)
T ss_dssp -C---TTCCHHHHHHHHHHTTHHHHHHHHHHHHHTTCCCSEEEECTTCGGGHHHHHHTTCCEEEEECSCHHHHHHHHHHH
T ss_pred -C---CchhHHHHHHHHHHhhhHHHHHHHHHhccCCCCCeEEEECCcchhHHHHHHHcCCCEEEEECccHHHHHHHHHHH
Confidence 0 011233334445555566777777652 2478 99999999999999999999999999999988777766544
Q ss_pred cccc--CCCCCCCCcccccCCCCCcccccccccchhhh-----HHHhHHHHHHhhccccEEEecchhhcCHHHHHHHHhc
Q 039701 162 VSKA--HESVSSDSEYFLVPGLPDRVEITKAQLPEILK-----LKSFGEPILAAEMASYGVIVNSFEELEPAYVEEYKNA 234 (476)
Q Consensus 162 ~~~~--~~~~~~~~~~~~~Pg~~~~~~~~~~~l~~~~~-----~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~ 234 (476)
.... .........+..+|++++ +...+++..+. ....+.+.....+++.+++.|++.+|++.++..+...
T Consensus 153 ~~~~~~~~~~~~~~~~~~~Pg~~p---~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~nt~~ele~~~~~~l~~~ 229 (480)
T 2vch_A 153 KLDETVSCEFRELTEPLMLPGCVP---VAGKDFLDPAQDRKDDAYKWLLHNTKRYKEAEGILVNTFFELEPNAIKALQEP 229 (480)
T ss_dssp HHHHHCCSCGGGCSSCBCCTTCCC---BCGGGSCGGGSCTTSHHHHHHHHHHHHGGGCSEEEESCCTTTSHHHHHHHHSC
T ss_pred HHHhcCCCcccccCCcccCCCCCC---CChHHCchhhhcCCchHHHHHHHHHHhcccCCEEEEcCHHHHhHHHHHHHHhc
Confidence 2110 011000122345667654 33333333221 2222233444566788889999999999888877642
Q ss_pred ---cCCceEEeCcccCCCCCcccccccCCCCCCCcccccccccCCCCCceEEEecCCcccCCHHHHHHHHHHHHhCCCCe
Q 039701 235 ---RDGKVWCVGPVSLCNKEDMDKLERGDKTSNDGSGCLKWLDSWQPGSAVYVCLGSLCDCSTRQLIELGLGLEATKKPF 311 (476)
Q Consensus 235 ---~~~~v~~vGpl~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~GS~~~~~~~~~~~i~~a~~~~~~~~ 311 (476)
+ +++++|||++...... . .+..+.++.+||+.++++++|||||||+...+.+++.++++++++.+++|
T Consensus 230 ~~~~-~~v~~vGpl~~~~~~~-----~---~~~~~~~~~~wLd~~~~~~vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~ 300 (480)
T 2vch_A 230 GLDK-PPVYPVGPLVNIGKQE-----A---KQTEESECLKWLDNQPLGSVLYVSFGSGGTLTCEQLNELALGLADSEQRF 300 (480)
T ss_dssp CTTC-CCEEECCCCCCCSCSC-----C--------CHHHHHHHTSCTTCEEEEECTTTCCCCHHHHHHHHHHHHHTTCEE
T ss_pred ccCC-CcEEEEeccccccccc-----c---CccchhHHHHHhcCCCCCceEEEecccccCCCHHHHHHHHHHHHhcCCcE
Confidence 3 6899999997653210 0 00125689999999888899999999999888899999999999999999
Q ss_pred EEEEcCCC------------------CCchhHHHHhcCCCeEeeccccHHHhhhCCCceeeecccChhhHHHHHHcCCCE
Q 039701 312 IWVIRPGD------------------QAFEKFEERIEGRGLLIRGWAPQVVILSHPAIGGFLTHCGWNSVLEAVSNGLPM 373 (476)
Q Consensus 312 i~~~~~~~------------------~~~~~~~~~~~~~nv~~~~~vpq~~ll~~~~~~~~I~HgG~~s~~eal~~GvP~ 373 (476)
||+++... ..++++.++++..++++.+|+||.+||+|+++++||||||+||++||+++||||
T Consensus 301 lw~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~g~~v~~w~Pq~~vL~h~~v~~fvtHgG~~S~~Eal~~GvP~ 380 (480)
T 2vch_A 301 LWVIRSPSGIANSSYFDSHSQTDPLTFLPPGFLERTKKRGFVIPFWAPQAQVLAHPSTGGFLTHCGWNSTLESVVSGIPL 380 (480)
T ss_dssp EEEECCCCSSTTTTTTCC--CSCGGGGSCTTHHHHTTTTEEEEESCCCHHHHHHSTTEEEEEECCCHHHHHHHHHHTCCE
T ss_pred EEEECCccccccccccccccccchhhhcCHHHHHHhCCCeEEEeCccCHHHHhCCCCcCeEEecccchhHHHHHHcCCCE
Confidence 99997642 114455555544556777799999999999999999999999999999999999
Q ss_pred ecccccccchhhHHHHHHhhcceEEeccCCCCCCcccccCCcccchhHHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHH
Q 039701 374 VTWPFFADQFCNEKLVVQVLRIGVTIGAERPPSLADEERNGVPVKKEDVKKAINMLMDEGEERDERRRRAREYGETAKTA 453 (476)
Q Consensus 374 l~~P~~~DQ~~~a~~v~e~~g~G~~l~~~~~~~~~~~~~~~~~~t~~~l~~~i~~ll~~~~~~~~~r~~a~~l~~~~~~~ 453 (476)
|++|++.||+.||+++++++|+|+.++..+ ++.+++++|+++|+++|++ +++++||+||++++++++++
T Consensus 381 i~~P~~~DQ~~na~~l~~~~G~g~~l~~~~----------~~~~~~~~l~~av~~vl~~-~~~~~~r~~a~~l~~~~~~a 449 (480)
T 2vch_A 381 IAWPLYAEQKMNAVLLSEDIRAALRPRAGD----------DGLVRREEVARVVKGLMEG-EEGKGVRNKMKELKEAACRV 449 (480)
T ss_dssp EECCCSTTHHHHHHHHHHTTCCEECCCCCT----------TSCCCHHHHHHHHHHHHTS-THHHHHHHHHHHHHHHHHHH
T ss_pred EeccccccchHHHHHHHHHhCeEEEeeccc----------CCccCHHHHHHHHHHHhcC-cchHHHHHHHHHHHHHHHHH
Confidence 999999999999999745999999986531 2369999999999999984 35669999999999999999
Q ss_pred HhhCCChHHHHHHHHHHHHH
Q 039701 454 IEEGGSSYLNIKLLIKDILQ 473 (476)
Q Consensus 454 ~~~gg~~~~~~~~~~~~i~~ 473 (476)
+.+||++.+++++|++.|.+
T Consensus 450 ~~~gGss~~~~~~~v~~~~~ 469 (480)
T 2vch_A 450 LKDDGTSTKALSLVALKWKA 469 (480)
T ss_dssp TSTTSHHHHHHHHHHHHHHH
T ss_pred HhcCCCHHHHHHHHHHHHHH
Confidence 99999999999999999876
No 4
>2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A*
Probab=100.00 E-value=8.5e-61 Score=481.46 Aligned_cols=433 Identities=25% Similarity=0.403 Sum_probs=318.5
Q ss_pred CCCCCCCCcEEEEEcCCCccChHHHHHHHHHHHHCCCe--EEEEeCCcchhhhhhHhhhcccCCCceEEEEeeCCCcccC
Q 039701 1 MASQAGSQLHFILFPFLAQGHMIPMIDIARLLAQHGAL--VTIVTTPMNAARFQNVIERGIQSGLRIQVIEFYFPCQEVG 78 (476)
Q Consensus 1 m~~~~~~~~~vl~~~~p~~GHv~P~l~La~~L~~rGH~--Vt~~~~~~~~~~~~~~~~~~~~~g~~i~~~~i~~~~~~~~ 78 (476)
|+.+.. ++||+++|+|++||++|++.||++|++|||+ |||++++...+.+.+.... ....+++|+.++ ++
T Consensus 1 m~~~~~-~~hvv~~p~p~~GHi~P~l~la~~L~~rGh~v~vt~~~t~~~~~~~~~~~~~--~~~~~i~~~~i~-----~g 72 (456)
T 2c1x_A 1 MSQTTT-NPHVAVLAFPFSTHAAPLLAVVRRLAAAAPHAVFSFFSTSQSNASIFHDSMH--TMQCNIKSYDIS-----DG 72 (456)
T ss_dssp -------CCEEEEECCCSSSSHHHHHHHHHHHHHHCTTSEEEEEECHHHHHHHC---------CTTEEEEECC-----CC
T ss_pred CCCCCC-CCEEEEEcCcccchHHHHHHHHHHHHhCCCCeEEEEEeCchhHHHhhccccc--cCCCceEEEeCC-----CC
Confidence 666555 7899999999999999999999999999765 5778877544433322110 002368998876 24
Q ss_pred CCCCCCCCCCCCCcCcHHHHHHHHH-HchHHHHHHHHhcCCCCeEEEecCCCchhHHHHhHcCCCcEEEecchHHHHHHH
Q 039701 79 LPEGCESWDKLPSMALLPKFFAAIE-MLRLPLETLFKEIQPKPGCLISDVCLPWTVSSACKFNVPRIVFHGFSCFCLLCL 157 (476)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~l~~~~~~~D~vI~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~ 157 (476)
+++..+... .....+..+..... .+.+.+.+++++.+.++|+||+|.++.|+..+|+++|||++.++++++..+..+
T Consensus 73 lp~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~ 150 (456)
T 2c1x_A 73 VPEGYVFAG--RPQEDIELFTRAAPESFRQGMVMAVAETGRPVSCLVADAFIWFAADMAAEMGVAWLPFWTAGPNSLSTH 150 (456)
T ss_dssp CCTTCCCCC--CTTHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCEEEEETTSTTHHHHHHHHTCEEEEEECSCHHHHHHH
T ss_pred CCCcccccC--ChHHHHHHHHHHhHHHHHHHHHHHHhccCCCceEEEECCchHhHHHHHHHhCCCEEEEeCccHHHHHHH
Confidence 554432211 11123333333332 333444444433236899999999999999999999999999999988776655
Q ss_pred hhhhcc---ccCCC-CCC-CCcccccCCCCCcccccccccchhhh-------HHHhHHHHHHhhccccEEEecchhhcCH
Q 039701 158 HSLSVS---KAHES-VSS-DSEYFLVPGLPDRVEITKAQLPEILK-------LKSFGEPILAAEMASYGVIVNSFEELEP 225 (476)
Q Consensus 158 ~~~~~~---~~~~~-~~~-~~~~~~~Pg~~~~~~~~~~~l~~~~~-------~~~~~~~~~~~~~~~~~~l~~~~~~l~~ 225 (476)
.+.+.. ..... ... .....++||++. +..++++..+. +.++..++.....+++.+++|++++|++
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~---~~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~ns~~~le~ 227 (456)
T 2c1x_A 151 VYIDEIREKIGVSGIQGREDELLNFIPGMSK---VRFRDLQEGIVFGNLNSLFSRMLHRMGQVLPKATAVFINSFEELDD 227 (456)
T ss_dssp HTHHHHHHHHCSSCCTTCTTCBCTTSTTCTT---CBGGGSCTTTSSSCTTSHHHHHHHHHHHHGGGSSCEEESSCGGGCH
T ss_pred hhhHHHHhccCCcccccccccccccCCCCCc---ccHHhCchhhcCCCcccHHHHHHHHHHHhhhhCCEEEECChHHHhH
Confidence 433210 01000 011 112235788765 34444443221 3344455555566788999999999999
Q ss_pred HHHHHHHhccCCceEEeCcccCCCCCcccccccCCCCCCCcccccccccCCCCCceEEEecCCcccCCHHHHHHHHHHHH
Q 039701 226 AYVEEYKNARDGKVWCVGPVSLCNKEDMDKLERGDKTSNDGSGCLKWLDSWQPGSAVYVCLGSLCDCSTRQLIELGLGLE 305 (476)
Q Consensus 226 ~~~~~~~~~~~~~v~~vGpl~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~GS~~~~~~~~~~~i~~a~~ 305 (476)
.+++.++..+ +++++|||+........ ...+.++.+||+..+++++|||||||......+++.+++++++
T Consensus 228 ~~~~~~~~~~-~~~~~vGpl~~~~~~~~---------~~~~~~~~~wl~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~l~ 297 (456)
T 2c1x_A 228 SLTNDLKSKL-KTYLNIGPFNLITPPPV---------VPNTTGCLQWLKERKPTSVVYISFGTVTTPPPAEVVALSEALE 297 (456)
T ss_dssp HHHHHHHHHS-SCEEECCCHHHHC------------------CHHHHHHTSCTTCEEEEECCSSCCCCHHHHHHHHHHHH
T ss_pred HHHHHHHhcC-CCEEEecCcccCccccc---------ccchhhHHHHHhcCCCcceEEEecCccccCCHHHHHHHHHHHH
Confidence 9888888776 68999999975422110 0013568899999888889999999999888889999999999
Q ss_pred hCCCCeEEEEcCCCC--CchhHHHHhcCCCeEeeccccHHHhhhCCCceeeecccChhhHHHHHHcCCCEecccccccch
Q 039701 306 ATKKPFIWVIRPGDQ--AFEKFEERIEGRGLLIRGWAPQVVILSHPAIGGFLTHCGWNSVLEAVSNGLPMVTWPFFADQF 383 (476)
Q Consensus 306 ~~~~~~i~~~~~~~~--~~~~~~~~~~~~nv~~~~~vpq~~ll~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~ 383 (476)
..+++|||+++.... .++++.++. ++|+++.+|+||.++|+|+++++||||||+||++||+++|||||++|++.||+
T Consensus 298 ~~~~~~lw~~~~~~~~~l~~~~~~~~-~~~~~v~~w~pq~~vL~h~~~~~fvth~G~~S~~Eal~~GvP~i~~P~~~dQ~ 376 (456)
T 2c1x_A 298 ASRVPFIWSLRDKARVHLPEGFLEKT-RGYGMVVPWAPQAEVLAHEAVGAFVTHCGWNSLWESVAGGVPLICRPFFGDQR 376 (456)
T ss_dssp HHTCCEEEECCGGGGGGSCTTHHHHH-TTTEEEESCCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHH
T ss_pred hcCCeEEEEECCcchhhCCHHHHhhc-CCceEEecCCCHHHHhcCCcCCEEEecCCcchHHHHHHhCceEEecCChhhHH
Confidence 999999999986531 245565543 68999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHhh-cceEEeccCCCCCCcccccCCcccchhHHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHHhhCCChHH
Q 039701 384 CNEKLVVQVL-RIGVTIGAERPPSLADEERNGVPVKKEDVKKAINMLMDEGEERDERRRRAREYGETAKTAIEEGGSSYL 462 (476)
Q Consensus 384 ~~a~~v~e~~-g~G~~l~~~~~~~~~~~~~~~~~~t~~~l~~~i~~ll~~~~~~~~~r~~a~~l~~~~~~~~~~gg~~~~ 462 (476)
.||++++ +. |+|+.+... .+++++|+++|+++|+|++ +++||+||+++++.+++++.+||||.+
T Consensus 377 ~Na~~l~-~~~g~g~~l~~~-------------~~~~~~l~~~i~~ll~~~~-~~~~r~~a~~l~~~~~~a~~~gGsS~~ 441 (456)
T 2c1x_A 377 LNGRMVE-DVLEIGVRIEGG-------------VFTKSGLMSCFDQILSQEK-GKKLRENLRALRETADRAVGPKGSSTE 441 (456)
T ss_dssp HHHHHHH-HTSCCEEECGGG-------------SCCHHHHHHHHHHHHHSHH-HHHHHHHHHHHHHHHHHHTSTTCHHHH
T ss_pred HHHHHHH-HHhCeEEEecCC-------------CcCHHHHHHHHHHHHCCCc-HHHHHHHHHHHHHHHHHhhhcCCcHHH
Confidence 9999995 76 999999765 6999999999999998754 789999999999999999999999999
Q ss_pred HHHHHHHHHH
Q 039701 463 NIKLLIKDIL 472 (476)
Q Consensus 463 ~~~~~~~~i~ 472 (476)
++++|+++|.
T Consensus 442 ~l~~~v~~~~ 451 (456)
T 2c1x_A 442 NFITLVDLVS 451 (456)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHHH
Confidence 9999999874
No 5
>2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A*
Probab=100.00 E-value=3e-60 Score=478.69 Aligned_cols=433 Identities=27% Similarity=0.424 Sum_probs=323.1
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHHC--CCeEEEEeCCcchh-hhhhHhhhcccCCCceEEEEeeCCCcccCCCCCCC
Q 039701 8 QLHFILFPFLAQGHMIPMIDIARLLAQH--GALVTIVTTPMNAA-RFQNVIERGIQSGLRIQVIEFYFPCQEVGLPEGCE 84 (476)
Q Consensus 8 ~~~vl~~~~p~~GHv~P~l~La~~L~~r--GH~Vt~~~~~~~~~-~~~~~~~~~~~~g~~i~~~~i~~~~~~~~~~~~~~ 84 (476)
++||+++|+|++||++|++.||++|++| ||+|||++++.+.+ .+.+.+......+.+++|+.+|.. .++. .+
T Consensus 9 ~~~vv~~p~p~~GHi~P~l~La~~L~~r~pG~~Vt~v~t~~~~~~~~~~~~~~~~~~~~~i~~~~lp~~----~~~~-~~ 83 (463)
T 2acv_A 9 NSELIFIPAPGIGHLASALEFAKLLTNHDKNLYITVFCIKFPGMPFADSYIKSVLASQPQIQLIDLPEV----EPPP-QE 83 (463)
T ss_dssp CEEEEEECCSSTTTHHHHHHHHHHHHHTCTTEEEEEEECCCTTCCCCHHHHHHHHCSCTTEEEEECCCC----CCCC-GG
T ss_pred CCEEEEEcCcccchHHHHHHHHHHHHhcCCCcEEEEEEcCCcchhhhhhhhhhcccCCCCceEEECCCC----CCCc-cc
Confidence 6899999999999999999999999999 99999999987531 122222211112346999998743 1222 11
Q ss_pred CCCCCCCcCcHHHHHHHHHHchHHHHHHHHhc-CCCCeEEEecCCCchhHHHHhHcCCCcEEEecchHHHHHHHhhhhcc
Q 039701 85 SWDKLPSMALLPKFFAAIEMLRLPLETLFKEI-QPKPGCLISDVCLPWTVSSACKFNVPRIVFHGFSCFCLLCLHSLSVS 163 (476)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-~~~~D~vI~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~ 163 (476)
... ..+.. +...+......++++++++ ..++|+||+|.++.|+..+|+++|||++.++++++..+..+++.+..
T Consensus 84 ~~~---~~~~~--~~~~~~~~~~~~~~ll~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~ 158 (463)
T 2acv_A 84 LLK---SPEFY--ILTFLESLIPHVKATIKTILSNKVVGLVLDFFCVSMIDVGNEFGIPSYLFLTSNVGFLSLMLSLKNR 158 (463)
T ss_dssp GGG---SHHHH--HHHHHHHTHHHHHHHHHHHCCTTEEEEEEEGGGGGGHHHHHHTTCCEEEEESSCHHHHHHHHHGGGS
T ss_pred ccC---CccHH--HHHHHHhhhHHHHHHHHhccCCCCeEEEECCcchhHHHHHHHcCCCEEEEeCchHHHHHHHHHHHhh
Confidence 001 11111 4455556666777777652 35899999999999999999999999999999999887777665533
Q ss_pred ccCCCCCCCCc---ccccCCC-CCcccccccccchhhh----HHHhHHHHHHhhccccEEEecchhhcCHHHHHHHHhcc
Q 039701 164 KAHESVSSDSE---YFLVPGL-PDRVEITKAQLPEILK----LKSFGEPILAAEMASYGVIVNSFEELEPAYVEEYKNAR 235 (476)
Q Consensus 164 ~~~~~~~~~~~---~~~~Pg~-~~~~~~~~~~l~~~~~----~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~ 235 (476)
.....+....+ +..+||+ ++ +...+++..+. ....+.+.....+++++++.|++.+|++.+.+.+....
T Consensus 159 ~~~~~~~~~~~~~~~~~~pg~~~~---~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~nt~~ele~~~~~~l~~~~ 235 (463)
T 2acv_A 159 QIEEVFDDSDRDHQLLNIPGISNQ---VPSNVLPDACFNKDGGYIAYYKLAERFRDTKGIIVNTFSDLEQSSIDALYDHD 235 (463)
T ss_dssp CTTCCCCCSSGGGCEECCTTCSSC---EEGGGSCHHHHCTTTHHHHHHHHHHHHTTSSEEEESCCHHHHHHHHHHHHHHC
T ss_pred cccCCCCCccccCceeECCCCCCC---CChHHCchhhcCCchHHHHHHHHHHhcccCCEEEECCHHHHhHHHHHHHHhcc
Confidence 21111111122 4567887 54 33344443211 11222333445567888899999999998888777644
Q ss_pred --CCceEEeCcccCCCCCcccccccCCCCCCCcccccccccCCCCCceEEEecCCcc-cCCHHHHHHHHHHHHhCCCCeE
Q 039701 236 --DGKVWCVGPVSLCNKEDMDKLERGDKTSNDGSGCLKWLDSWQPGSAVYVCLGSLC-DCSTRQLIELGLGLEATKKPFI 312 (476)
Q Consensus 236 --~~~v~~vGpl~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~GS~~-~~~~~~~~~i~~a~~~~~~~~i 312 (476)
++++++|||+......... ... +..+.++.+||+.++++++|||||||.. ..+.+++.+++++++..+++||
T Consensus 236 ~p~~~v~~vGpl~~~~~~~~~----~~~-~~~~~~~~~wl~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~~l~~~~~~~l 310 (463)
T 2acv_A 236 EKIPPIYAVGPLLDLKGQPNP----KLD-QAQHDLILKWLDEQPDKSVVFLCFGSMGVSFGPSQIREIALGLKHSGVRFL 310 (463)
T ss_dssp TTSCCEEECCCCCCSSCCCBT----TBC-HHHHHHHHHHHHTSCTTCEEEEECCSSCCCCCHHHHHHHHHHHHHHTCEEE
T ss_pred ccCCcEEEeCCCccccccccc----ccc-cccchhHHHHHhcCCCCceEEEEeccccccCCHHHHHHHHHHHHhCCCcEE
Confidence 5799999999864320000 000 0114678999999888899999999999 7788889999999999999999
Q ss_pred EEEcCC-CCCchhHHHHhc-CCCeEeeccccHHHhhhCCCceeeecccChhhHHHHHHcCCCEecccccccchhhHHHHH
Q 039701 313 WVIRPG-DQAFEKFEERIE-GRGLLIRGWAPQVVILSHPAIGGFLTHCGWNSVLEAVSNGLPMVTWPFFADQFCNEKLVV 390 (476)
Q Consensus 313 ~~~~~~-~~~~~~~~~~~~-~~nv~~~~~vpq~~ll~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~~a~~v~ 390 (476)
|+++.+ ...++++.++.. ++|+++.+|+||.++|+|+++++||||||+||++||+++|||||++|++.||+.||++++
T Consensus 311 ~~~~~~~~~l~~~~~~~~~~~~~~~v~~w~pq~~vL~h~~~~~fvth~G~~s~~Eal~~GvP~i~~P~~~dQ~~Na~~lv 390 (463)
T 2acv_A 311 WSNSAEKKVFPEGFLEWMELEGKGMICGWAPQVEVLAHKAIGGFVSHCGWNSILESMWFGVPILTWPIYAEQQLNAFRLV 390 (463)
T ss_dssp EECCCCGGGSCTTHHHHHHHHCSEEEESSCCHHHHHHSTTEEEEEECCCHHHHHHHHHTTCCEEECCCSTTHHHHHHHHH
T ss_pred EEECCCcccCChhHHHhhccCCCEEEEccCCHHHHhCCCccCeEEecCCchhHHHHHHcCCCeeeccchhhhHHHHHHHH
Confidence 999874 112556655431 568899999999999999999999999999999999999999999999999999999942
Q ss_pred HhhcceEEe-ccCCCCCCcccccCCc--ccchhHHHHHHHHHhcC-ChhhHHHHHHHHHHHHHHHHHHhhCCChHHHHHH
Q 039701 391 QVLRIGVTI-GAERPPSLADEERNGV--PVKKEDVKKAINMLMDE-GEERDERRRRAREYGETAKTAIEEGGSSYLNIKL 466 (476)
Q Consensus 391 e~~g~G~~l-~~~~~~~~~~~~~~~~--~~t~~~l~~~i~~ll~~-~~~~~~~r~~a~~l~~~~~~~~~~gg~~~~~~~~ 466 (476)
+++|+|+.+ +..+ .+ .+++++|+++|+++|++ + +||+||+++++.+++++.+||+|.+++++
T Consensus 391 ~~~g~g~~l~~~~~----------~~~~~~~~~~l~~ai~~ll~~~~----~~r~~a~~l~~~~~~a~~~gGss~~~l~~ 456 (463)
T 2acv_A 391 KEWGVGLGLRVDYR----------KGSDVVAAEEIEKGLKDLMDKDS----IVHKKVQEMKEMSRNAVVDGGSSLISVGK 456 (463)
T ss_dssp HTSCCEEESCSSCC----------TTCCCCCHHHHHHHHHHHTCTTC----THHHHHHHHHHHHHHHTSTTSHHHHHHHH
T ss_pred HHcCeEEEEecccC----------CCCccccHHHHHHHHHHHHhccH----HHHHHHHHHHHHHHHHHhcCCcHHHHHHH
Confidence 599999998 3110 12 58999999999999973 4 89999999999999999999999999999
Q ss_pred HHHHHH
Q 039701 467 LIKDIL 472 (476)
Q Consensus 467 ~~~~i~ 472 (476)
|+++|.
T Consensus 457 ~v~~~~ 462 (463)
T 2acv_A 457 LIDDIT 462 (463)
T ss_dssp HHHHHH
T ss_pred HHHHhc
Confidence 999885
No 6
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=100.00 E-value=6.3e-46 Score=372.33 Aligned_cols=402 Identities=19% Similarity=0.212 Sum_probs=267.2
Q ss_pred CCCCCCC----CcEEEEEcCCCccChHHHHHHHHHHHHCCCeEEEEeCCcchhhhhhHhhhcccCCCceEEEEeeCCCcc
Q 039701 1 MASQAGS----QLHFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTTPMNAARFQNVIERGIQSGLRIQVIEFYFPCQE 76 (476)
Q Consensus 1 m~~~~~~----~~~vl~~~~p~~GHv~P~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~g~~i~~~~i~~~~~~ 76 (476)
|+++++| .+||+|+++|++||++|++.||++|++|||+|+|++++.+.+.+.+. +++|+.++..
T Consensus 1 ~~~~~~~~~m~~~~Il~~~~~~~GHv~p~l~la~~L~~~Gh~V~~~~~~~~~~~~~~~---------g~~~~~~~~~--- 68 (424)
T 2iya_A 1 MTSEHRSASVTPRHISFFNIPGHGHVNPSLGIVQELVARGHRVSYAITDEFAAQVKAA---------GATPVVYDSI--- 68 (424)
T ss_dssp ----------CCCEEEEECCSCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHH---------TCEEEECCCC---
T ss_pred CCcccccCCcccceEEEEeCCCCcccchHHHHHHHHHHCCCeEEEEeCHHHHHHHHhC---------CCEEEecCcc---
Confidence 5666444 37999999999999999999999999999999999998877766665 5788877632
Q ss_pred cCCCCCCCCCCCCCC--cCcHHHHHHHHHHchHHHHHHHHhcCCCCeEEEecCCCchhHHHHhHcCCCcEEEecchHHHH
Q 039701 77 VGLPEGCESWDKLPS--MALLPKFFAAIEMLRLPLETLFKEIQPKPGCLISDVCLPWTVSSACKFNVPRIVFHGFSCFCL 154 (476)
Q Consensus 77 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~l~~~~~~~D~vI~D~~~~~~~~~A~~~giP~v~~~~~~~~~~ 154 (476)
++.........+. ...+..+..........+.+++++ .+||+||+|.++.|+..+|+++|||++.+++.+....
T Consensus 69 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~--~~pD~VI~d~~~~~~~~~A~~lgIP~v~~~~~~~~~~ 144 (424)
T 2iya_A 69 --LPKESNPEESWPEDQESAMGLFLDEAVRVLPQLEDAYAD--DRPDLIVYDIASWPAPVLGRKWDIPFVQLSPTFVAYE 144 (424)
T ss_dssp --SCCTTCTTCCCCSSHHHHHHHHHHHHHHHHHHHHHHTTT--SCCSEEEEETTCTHHHHHHHHHTCCEEEEESSCCCCT
T ss_pred --ccccccchhhcchhHHHHHHHHHHHHHHHHHHHHHHHhc--cCCCEEEEcCcccHHHHHHHhcCCCEEEEeccccccc
Confidence 2222111000111 011222233334455667777777 8999999999888999999999999999987764111
Q ss_pred HHHhhhhccccCCCCCCCCcccccC-CCCCcccccccccch--hh-h-HHHhHHH------HHHhhccccEEEecchhhc
Q 039701 155 LCLHSLSVSKAHESVSSDSEYFLVP-GLPDRVEITKAQLPE--IL-K-LKSFGEP------ILAAEMASYGVIVNSFEEL 223 (476)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~P-g~~~~~~~~~~~l~~--~~-~-~~~~~~~------~~~~~~~~~~~l~~~~~~l 223 (476)
.....+... .........+...| +......+.. ..+. .+ . ..++..+ ........+.++.++..++
T Consensus 145 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~l 221 (424)
T 2iya_A 145 GFEEDVPAV--QDPTADRGEEAAAPAGTGDAEEGAE-AEDGLVRFFTRLSAFLEEHGVDTPATEFLIAPNRCIVALPRTF 221 (424)
T ss_dssp THHHHSGGG--SCCCC----------------------HHHHHHHHHHHHHHHHHTTCCSCHHHHHHCCSSEEESSCTTT
T ss_pred ccccccccc--cccccccccccccccccccchhhhc-cchhHHHHHHHHHHHHHHcCCCCCHHHhccCCCcEEEEcchhh
Confidence 000000000 00000000000000 0000000000 0010 00 0 1111111 0011114566788888888
Q ss_pred CHHHHHHHHhccCCceEEeCcccCCCCCcccccccCCCCCCCcccccccccCCCCCceEEEecCCcccCCHHHHHHHHHH
Q 039701 224 EPAYVEEYKNARDGKVWCVGPVSLCNKEDMDKLERGDKTSNDGSGCLKWLDSWQPGSAVYVCLGSLCDCSTRQLIELGLG 303 (476)
Q Consensus 224 ~~~~~~~~~~~~~~~v~~vGpl~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~GS~~~~~~~~~~~i~~a 303 (476)
+++ ...+++++++|||++... .+..+|++..+++++|||++||......+.+..++++
T Consensus 222 ~~~-----~~~~~~~~~~vGp~~~~~-----------------~~~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~a 279 (424)
T 2iya_A 222 QIK-----GDTVGDNYTFVGPTYGDR-----------------SHQGTWEGPGDGRPVLLIALGSAFTDHLDFYRTCLSA 279 (424)
T ss_dssp STT-----GGGCCTTEEECCCCCCCC-----------------GGGCCCCCCCSSCCEEEEECCSSSCCCHHHHHHHHHH
T ss_pred CCC-----ccCCCCCEEEeCCCCCCc-----------------ccCCCCCccCCCCCEEEEEcCCCCcchHHHHHHHHHH
Confidence 743 245778999999976431 1123677665567799999999986567888889999
Q ss_pred HHhCCCCeEEEEcCCCCCchhHHHHhcCCCeEeeccccHHHhhhCCCceeeecccChhhHHHHHHcCCCEecccccccch
Q 039701 304 LEATKKPFIWVIRPGDQAFEKFEERIEGRGLLIRGWAPQVVILSHPAIGGFLTHCGWNSVLEAVSNGLPMVTWPFFADQF 383 (476)
Q Consensus 304 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~nv~~~~~vpq~~ll~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~ 383 (476)
+++.+++++|.++.+.. .+.+.. .++|+.+.+|+||.++|+++++ ||||||+||++||+++|||+|++|...||+
T Consensus 280 l~~~~~~~~~~~g~~~~-~~~~~~--~~~~v~~~~~~~~~~~l~~~d~--~v~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~ 354 (424)
T 2iya_A 280 VDGLDWHVVLSVGRFVD-PADLGE--VPPNVEVHQWVPQLDILTKASA--FITHAGMGSTMEALSNAVPMVAVPQIAEQT 354 (424)
T ss_dssp HTTCSSEEEEECCTTSC-GGGGCS--CCTTEEEESSCCHHHHHTTCSE--EEECCCHHHHHHHHHTTCCEEECCCSHHHH
T ss_pred HhcCCcEEEEEECCcCC-hHHhcc--CCCCeEEecCCCHHHHHhhCCE--EEECCchhHHHHHHHcCCCEEEecCccchH
Confidence 99989999998876432 122211 3789999999999999999998 999999999999999999999999999999
Q ss_pred hhHHHHHHhhcceEEeccCCCCCCcccccCCcccchhHHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHHhhCCChHHH
Q 039701 384 CNEKLVVQVLRIGVTIGAERPPSLADEERNGVPVKKEDVKKAINMLMDEGEERDERRRRAREYGETAKTAIEEGGSSYLN 463 (476)
Q Consensus 384 ~~a~~v~e~~g~G~~l~~~~~~~~~~~~~~~~~~t~~~l~~~i~~ll~~~~~~~~~r~~a~~l~~~~~~~~~~gg~~~~~ 463 (476)
.||+++ +++|+|..++.. .+++++|.++|+++|+|+ +++++++++++++++ .++..+.
T Consensus 355 ~na~~l-~~~g~g~~~~~~-------------~~~~~~l~~~i~~ll~~~----~~~~~~~~~~~~~~~----~~~~~~~ 412 (424)
T 2iya_A 355 MNAERI-VELGLGRHIPRD-------------QVTAEKLREAVLAVASDP----GVAERLAAVRQEIRE----AGGARAA 412 (424)
T ss_dssp HHHHHH-HHTTSEEECCGG-------------GCCHHHHHHHHHHHHHCH----HHHHHHHHHHHHHHT----SCHHHHH
T ss_pred HHHHHH-HHCCCEEEcCcC-------------CCCHHHHHHHHHHHHcCH----HHHHHHHHHHHHHHh----cCcHHHH
Confidence 999999 599999998766 689999999999999987 899999999998774 3444445
Q ss_pred HHHHHHH
Q 039701 464 IKLLIKD 470 (476)
Q Consensus 464 ~~~~~~~ 470 (476)
++.+.+.
T Consensus 413 ~~~i~~~ 419 (424)
T 2iya_A 413 ADILEGI 419 (424)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 4444443
No 7
>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*
Probab=100.00 E-value=5.1e-45 Score=362.85 Aligned_cols=363 Identities=16% Similarity=0.153 Sum_probs=234.1
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHHCCCeEEEEeCCcchhhhhhHhhhcccCCCceEEEEeeCCCccc--CCCCCCCC
Q 039701 8 QLHFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTTPMNAARFQNVIERGIQSGLRIQVIEFYFPCQEV--GLPEGCES 85 (476)
Q Consensus 8 ~~~vl~~~~p~~GHv~P~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~g~~i~~~~i~~~~~~~--~~~~~~~~ 85 (476)
.|||||+++|++||++|+++||++|++|||+|||++++.+.+.. .. ++.++.+....... ..+.....
T Consensus 22 ~MRIL~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~t~~~~~~~~-~~---------g~~~~~~~~~~~~~~~~~~~~~~~ 91 (400)
T 4amg_A 22 SMRALFITSPGLSHILPTVPLAQALRALGHEVRYATGGDIRAVA-EA---------GLCAVDVSPGVNYAKLFVPDDTDV 91 (400)
T ss_dssp CCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEECSSTHHHH-TT---------TCEEEESSTTCCSHHHHSCCC---
T ss_pred CCeEEEECCCchhHHHHHHHHHHHHHHCCCEEEEEeCcchhhHH-hc---------CCeeEecCCchhHhhhcccccccc
Confidence 68999999999999999999999999999999999998665422 22 46666653221110 00111111
Q ss_pred CCCCCCc----CcH-HHHHHHHHHchHHHHHHHHhcCCCCeEEEecCCCchhHHHHhHcCCCcEEEecchHHHHHHHhhh
Q 039701 86 WDKLPSM----ALL-PKFFAAIEMLRLPLETLFKEIQPKPGCLISDVCLPWTVSSACKFNVPRIVFHGFSCFCLLCLHSL 160 (476)
Q Consensus 86 ~~~~~~~----~~~-~~~~~~~~~~~~~l~~~l~~~~~~~D~vI~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~ 160 (476)
....... ..+ ..+..........+.+++++ .+||+||+|.+++++..+|+.+|||++.+.+.+.......
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~pD~Vv~d~~~~~~~~~A~~~gip~~~~~~~~~~~~~~~--- 166 (400)
T 4amg_A 92 TDPMHSEGLGEGFFAEMFARVSAVAVDGALRTARS--WRPDLVVHTPTQGAGPLTAAALQLPCVELPLGPADSEPGL--- 166 (400)
T ss_dssp ---------CHHHHHHHHHHHHHHHHHHHHHHHHH--HCCSEEEECTTCTHHHHHHHHTTCCEEECCSSTTTCCHHH---
T ss_pred ccccchhhhhHHHHHHHHHHHHHHHHHHHHHHHHh--cCCCEEEECcchHHHHHHHHHcCCCceeecccccccccch---
Confidence 1100000 111 11122223345566677777 8999999999999999999999999998654432111000
Q ss_pred hccccCCCCCCCCcccccCCCCCcccccccccchhhhHHHhHHHHHHhh----ccccEEEecchhhcCHHHHHHHH--hc
Q 039701 161 SVSKAHESVSSDSEYFLVPGLPDRVEITKAQLPEILKLKSFGEPILAAE----MASYGVIVNSFEELEPAYVEEYK--NA 234 (476)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~Pg~~~~~~~~~~~l~~~~~~~~~~~~~~~~~----~~~~~~l~~~~~~l~~~~~~~~~--~~ 234 (476)
... ..+...+..... ........... +....... ..
T Consensus 167 --------------------------------~~~--~~~~l~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~ 208 (400)
T 4amg_A 167 --------------------------------GAL--IRRAMSKDYERHGVTGEPTGSVRLTTT----PPSVEALLPEDR 208 (400)
T ss_dssp --------------------------------HHH--HHHHTHHHHHHTTCCCCCSCEEEEECC----CHHHHHTSCGGG
T ss_pred --------------------------------hhH--HHHHHHHHHHHhCCCcccccchhhccc----CchhhccCcccc
Confidence 000 111111111110 11111111111 01110100 00
Q ss_pred cCCceEEeCcccCCCCCcccccccCCCCCCCcccccccccCCCCCceEEEecCCcccCC--HHHHHHHHHHHHhCCCCeE
Q 039701 235 RDGKVWCVGPVSLCNKEDMDKLERGDKTSNDGSGCLKWLDSWQPGSAVYVCLGSLCDCS--TRQLIELGLGLEATKKPFI 312 (476)
Q Consensus 235 ~~~~v~~vGpl~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~GS~~~~~--~~~~~~i~~a~~~~~~~~i 312 (476)
..+..+.+.+.... ....+.+|++..+.+++|||||||+.... .+.+..+++++++.+.++|
T Consensus 209 ~~~~~~~~~~~~~~----------------~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~~~~l~~~~~~~v 272 (400)
T 4amg_A 209 RSPGAWPMRYVPYN----------------GGAVLPDWLPPAAGRRRIAVTLGSIDALSGGIAKLAPLFSEVADVDAEFV 272 (400)
T ss_dssp CCTTCEECCCCCCC----------------CCEECCTTCSCCTTCCEEEECCCSCC--CCSSSTTHHHHHHGGGSSSEEE
T ss_pred cCCcccCccccccc----------------ccccCcccccccCCCcEEEEeCCcccccCccHHHHHHHHHHhhccCceEE
Confidence 11222222222111 13456689988888899999999987643 3567889999999999999
Q ss_pred EEEcCCCCCchhHHHHhcCCCeEeeccccHHHhhhCCCceeeecccChhhHHHHHHcCCCEecccccccchhhHHHHHHh
Q 039701 313 WVIRPGDQAFEKFEERIEGRGLLIRGWAPQVVILSHPAIGGFLTHCGWNSVLEAVSNGLPMVTWPFFADQFCNEKLVVQV 392 (476)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~nv~~~~~vpq~~ll~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~~a~~v~e~ 392 (476)
|..++... +... ..|+|+.+.+|+||.++|+++++ ||||||+||++||+++|||+|++|++.||+.||+++ ++
T Consensus 273 ~~~~~~~~--~~~~--~~~~~v~~~~~~p~~~lL~~~~~--~v~h~G~~s~~Eal~~GvP~v~~P~~~dQ~~na~~v-~~ 345 (400)
T 4amg_A 273 LTLGGGDL--ALLG--ELPANVRVVEWIPLGALLETCDA--IIHHGGSGTLLTALAAGVPQCVIPHGSYQDTNRDVL-TG 345 (400)
T ss_dssp EECCTTCC--CCCC--CCCTTEEEECCCCHHHHHTTCSE--EEECCCHHHHHHHHHHTCCEEECCC---CHHHHHHH-HH
T ss_pred EEecCccc--cccc--cCCCCEEEEeecCHHHHhhhhhh--eeccCCccHHHHHHHhCCCEEEecCcccHHHHHHHH-HH
Confidence 99877642 1111 14789999999999999999998 999999999999999999999999999999999999 59
Q ss_pred hcceEEeccCCCCCCcccccCCcccchhHHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHH
Q 039701 393 LRIGVTIGAERPPSLADEERNGVPVKKEDVKKAINMLMDEGEERDERRRRAREYGETAKTAIEEGGSSYLNIKLLIKDIL 472 (476)
Q Consensus 393 ~g~G~~l~~~~~~~~~~~~~~~~~~t~~~l~~~i~~ll~~~~~~~~~r~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~i~ 472 (476)
+|+|+.++.. .++++ +|+++|+|+ +||+||+++++++++. .| ..+.++.|+
T Consensus 346 ~G~g~~l~~~-------------~~~~~----al~~lL~d~----~~r~~a~~l~~~~~~~---~~-----~~~~a~~le 396 (400)
T 4amg_A 346 LGIGFDAEAG-------------SLGAE----QCRRLLDDA----GLREAALRVRQEMSEM---PP-----PAETAAXLV 396 (400)
T ss_dssp HTSEEECCTT-------------TCSHH----HHHHHHHCH----HHHHHHHHHHHHHHTS---CC-----HHHHHHHHH
T ss_pred CCCEEEcCCC-------------CchHH----HHHHHHcCH----HHHHHHHHHHHHHHcC---CC-----HHHHHHHHH
Confidence 9999998766 46654 567788887 8999999999998865 32 345666666
Q ss_pred Hhc
Q 039701 473 QQA 475 (476)
Q Consensus 473 ~~~ 475 (476)
+++
T Consensus 397 ~lA 399 (400)
T 4amg_A 397 ALA 399 (400)
T ss_dssp HHC
T ss_pred Hhh
Confidence 665
No 8
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=100.00 E-value=8.8e-42 Score=341.08 Aligned_cols=371 Identities=16% Similarity=0.086 Sum_probs=248.1
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHHCCCeEEEEeCCcchhhhhhHhhhcccCCCceEEEEeeCCCcccCCCCCCCCCCC
Q 039701 9 LHFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTTPMNAARFQNVIERGIQSGLRIQVIEFYFPCQEVGLPEGCESWDK 88 (476)
Q Consensus 9 ~~vl~~~~p~~GHv~P~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~g~~i~~~~i~~~~~~~~~~~~~~~~~~ 88 (476)
+||+|++.|+.||++|+++||++|++|||+|+|++++...+.+.+. +++|+.++....+ .+ .....
T Consensus 1 M~Il~~~~~~~GHv~P~l~la~~L~~~Gh~V~~~~~~~~~~~v~~~---------g~~~~~i~~~~~~-~~----~~~~~ 66 (415)
T 1iir_A 1 MRVLLATCGSRGDTEPLVALAVRVRDLGADVRMCAPPDCAERLAEV---------GVPHVPVGPSARA-PI----QRAKP 66 (415)
T ss_dssp CEEEEECCSCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHT---------TCCEEECCC------------CCSC
T ss_pred CeEEEEcCCCchhHHHHHHHHHHHHHCCCeEEEEcCHHHHHHHHHc---------CCeeeeCCCCHHH-Hh----hcccc
Confidence 4899999999999999999999999999999999998765555443 5888887743211 11 11000
Q ss_pred CCCcCcHHHHHHHHHHc-hHHHHHHHHhcCCCCeEEEecC-CCch--hHHHHhHcCCCcEEEecchHHHHHHHhhhhccc
Q 039701 89 LPSMALLPKFFAAIEML-RLPLETLFKEIQPKPGCLISDV-CLPW--TVSSACKFNVPRIVFHGFSCFCLLCLHSLSVSK 164 (476)
Q Consensus 89 ~~~~~~~~~~~~~~~~~-~~~l~~~l~~~~~~~D~vI~D~-~~~~--~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~ 164 (476)
... ..+....... ...++++.+. ..+||+||+|. +..+ +..+|+++|||++.+.+.++....
T Consensus 67 --~~~--~~~~~~~~~~~~~~~~~l~~~-~~~pD~vi~d~~~~~~~~~~~~A~~lgiP~v~~~~~~~~~~~--------- 132 (415)
T 1iir_A 67 --LTA--EDVRRFTTEAIATQFDEIPAA-AEGCAAVVTTGLLAAAIGVRSVAEKLGIPYFYAFHCPSYVPS--------- 132 (415)
T ss_dssp --CCH--HHHHHHHHHHHHHHHHHHHHH-TTTCSEEEEESCHHHHHHHHHHHHHHTCCEEEEESSGGGSCC---------
T ss_pred --cch--HHHHHHHHHHHHHHHHHHHHH-hcCCCEEEECChhHhHhhHHHHHHHhCCCEEEEecCCCcCCC---------
Confidence 101 1111222211 2334444431 27999999998 5678 899999999999999877643210
Q ss_pred cCCCCCCCCcccccCCCCCccccccc----ccchh-hh------HHHhHHHHHHh------------hccccEEEecchh
Q 039701 165 AHESVSSDSEYFLVPGLPDRVEITKA----QLPEI-LK------LKSFGEPILAA------------EMASYGVIVNSFE 221 (476)
Q Consensus 165 ~~~~~~~~~~~~~~Pg~~~~~~~~~~----~l~~~-~~------~~~~~~~~~~~------------~~~~~~~l~~~~~ 221 (476)
.++|.....+.++.+ .+... .. +.......... .... ..+.++.+
T Consensus 133 -----------~~~p~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~l~~~~~ 200 (415)
T 1iir_A 133 -----------PYYPPPPLGEPSTQDTIDIPAQWERNNQSAYQRYGGLLNSHRDAIGLPPVEDIFTFGYTD-HPWVAADP 200 (415)
T ss_dssp -----------SSSCCCC---------CHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHCS-SCEECSCT
T ss_pred -----------cccCCccCCccccchHHHHHHHHHHHHHHHHHHhHHHHHHHHHHcCCCCCCccccccCCC-CEEEeeCh
Confidence 001100000001000 00000 00 00001111110 0111 35677777
Q ss_pred hcCHHHHHHHHhccCCceEEeCcccCCCCCcccccccCCCCCCCcccccccccCCCCCceEEEecCCcccCCHHHHHHHH
Q 039701 222 ELEPAYVEEYKNARDGKVWCVGPVSLCNKEDMDKLERGDKTSNDGSGCLKWLDSWQPGSAVYVCLGSLCDCSTRQLIELG 301 (476)
Q Consensus 222 ~l~~~~~~~~~~~~~~~v~~vGpl~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~GS~~~~~~~~~~~i~ 301 (476)
++++. .+..+ ++++|||+...... ..+.++.+|++..+ ++|||++||.. ...+.+..++
T Consensus 201 ~l~~~----~~~~~--~~~~vG~~~~~~~~------------~~~~~~~~~l~~~~--~~v~v~~Gs~~-~~~~~~~~~~ 259 (415)
T 1iir_A 201 VLAPL----QPTDL--DAVQTGAWILPDER------------PLSPELAAFLDAGP--PPVYLGFGSLG-APADAVRVAI 259 (415)
T ss_dssp TTSCC----CCCSS--CCEECCCCCCCCCC------------CCCHHHHHHHHTSS--CCEEEECC----CCHHHHHHHH
T ss_pred hhcCC----CcccC--CeEeeCCCccCccc------------CCCHHHHHHHhhCC--CeEEEeCCCCC-CcHHHHHHHH
Confidence 77631 11222 78999998764221 12567889997653 58999999987 5667778899
Q ss_pred HHHHhCCCCeEEEEcCCCCCchhHHHHhcCCCeEeeccccHHHhhhCCCceeeecccChhhHHHHHHcCCCEeccccccc
Q 039701 302 LGLEATKKPFIWVIRPGDQAFEKFEERIEGRGLLIRGWAPQVVILSHPAIGGFLTHCGWNSVLEAVSNGLPMVTWPFFAD 381 (476)
Q Consensus 302 ~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~nv~~~~~vpq~~ll~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~D 381 (476)
+++++.+.+++|+++.... + . ...++|+.+.+|+||.++|+.+++ ||||||+||++||+++|+|+|++|...|
T Consensus 260 ~al~~~~~~~v~~~g~~~~--~-~--~~~~~~v~~~~~~~~~~~l~~~d~--~v~~~G~~t~~Ea~~~G~P~i~~p~~~d 332 (415)
T 1iir_A 260 DAIRAHGRRVILSRGWADL--V-L--PDDGADCFAIGEVNHQVLFGRVAA--VIHHGGAGTTHVAARAGAPQILLPQMAD 332 (415)
T ss_dssp HHHHHTTCCEEECTTCTTC--C-C--SSCGGGEEECSSCCHHHHGGGSSE--EEECCCHHHHHHHHHHTCCEEECCCSTT
T ss_pred HHHHHCCCeEEEEeCCCcc--c-c--cCCCCCEEEeCcCChHHHHhhCCE--EEeCCChhHHHHHHHcCCCEEECCCCCc
Confidence 9999999999999876542 1 1 113679999999999999988888 9999999999999999999999999999
Q ss_pred chhhHHHHHHhhcceEEeccCCCCCCcccccCCcccchhHHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHHhhCCChH
Q 039701 382 QFCNEKLVVQVLRIGVTIGAERPPSLADEERNGVPVKKEDVKKAINMLMDEGEERDERRRRAREYGETAKTAIEEGGSSY 461 (476)
Q Consensus 382 Q~~~a~~v~e~~g~G~~l~~~~~~~~~~~~~~~~~~t~~~l~~~i~~ll~~~~~~~~~r~~a~~l~~~~~~~~~~gg~~~ 461 (476)
|+.||+++ ++.|+|..++.. .+++++|.++|+++ +|+ +|++++++++++++..
T Consensus 333 Q~~na~~l-~~~g~g~~~~~~-------------~~~~~~l~~~i~~l-~~~----~~~~~~~~~~~~~~~~-------- 385 (415)
T 1iir_A 333 QPYYAGRV-AELGVGVAHDGP-------------IPTFDSLSAALATA-LTP----ETHARATAVAGTIRTD-------- 385 (415)
T ss_dssp HHHHHHHH-HHHTSEEECSSS-------------SCCHHHHHHHHHHH-TSH----HHHHHHHHHHHHSCSC--------
T ss_pred cHHHHHHH-HHCCCcccCCcC-------------CCCHHHHHHHHHHH-cCH----HHHHHHHHHHHHHhhc--------
Confidence 99999999 699999998765 58999999999999 876 8999999998887632
Q ss_pred HHHHHHHHHHHHh
Q 039701 462 LNIKLLIKDILQQ 474 (476)
Q Consensus 462 ~~~~~~~~~i~~~ 474 (476)
...+++++.|+++
T Consensus 386 ~~~~~~~~~i~~~ 398 (415)
T 1iir_A 386 GAAVAARLLLDAV 398 (415)
T ss_dssp HHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHH
Confidence 4445555555543
No 9
>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=100.00 E-value=1.1e-40 Score=333.31 Aligned_cols=357 Identities=14% Similarity=0.044 Sum_probs=244.7
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHHCCCeEEEEeCCcchhhhhhHhhhcccCCCceEEEEeeCCCcccCCCCCCCCCCC
Q 039701 9 LHFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTTPMNAARFQNVIERGIQSGLRIQVIEFYFPCQEVGLPEGCESWDK 88 (476)
Q Consensus 9 ~~vl~~~~p~~GHv~P~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~g~~i~~~~i~~~~~~~~~~~~~~~~~~ 88 (476)
+||+|++.++.||++|+++||++|+++||+|+|++++.+.+.+.+. +++|+.++..... .+.. . ..
T Consensus 1 MrIl~~~~~~~GH~~p~l~la~~L~~~Gh~V~~~~~~~~~~~v~~~---------g~~~~~~~~~~~~-~~~~-~--~~- 66 (416)
T 1rrv_A 1 MRVLLSVCGTRGDVEIGVALADRLKALGVQTRMCAPPAAEERLAEV---------GVPHVPVGLPQHM-MLQE-G--MP- 66 (416)
T ss_dssp CEEEEEEESCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHH---------TCCEEECSCCGGG-CCCT-T--SC-
T ss_pred CeEEEEecCCCccHHHHHHHHHHHHHCCCeEEEEeCHHHHHHHHHc---------CCeeeecCCCHHH-HHhh-c--cc-
Confidence 4899999999999999999999999999999999998766666655 5888887743211 1111 0 00
Q ss_pred CCCcCcHHHHHHHHHHchHHHHHHHHhcCCCCeEEEecC-CCch--hHHHHhHcCCCcEEEecchHHHHHHHhhhhcccc
Q 039701 89 LPSMALLPKFFAAIEMLRLPLETLFKEIQPKPGCLISDV-CLPW--TVSSACKFNVPRIVFHGFSCFCLLCLHSLSVSKA 165 (476)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~D~vI~D~-~~~~--~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~ 165 (476)
. .....+...+......+.+.+.+...+||+||+|. +.++ +..+|+.+|||++.+.+.+.....
T Consensus 67 --~-~~~~~~~~~~~~~~~~~~~~l~~~~~~pD~vi~d~~~~~~~~~~~~A~~~giP~v~~~~~~~~~~~---------- 133 (416)
T 1rrv_A 67 --P-PPPEEEQRLAAMTVEMQFDAVPGAAEGCAAVVAVGDLAAATGVRSVAEKLGLPFFYSVPSPVYLAS---------- 133 (416)
T ss_dssp --C-CCHHHHHHHHHHHHHHHHHHHHHHTTTCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGSCC----------
T ss_pred --c-chhHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEcCchHHHHHHHHHHHHcCCCEEEEeCCCCCCCC----------
Confidence 0 10011111121121222222221127999999997 4466 889999999999998777533210
Q ss_pred CCCCCCCCccccc-CCCCCccccccc-ccchh----hh----------HHHhHHH--------HHHhhccccEEEecchh
Q 039701 166 HESVSSDSEYFLV-PGLPDRVEITKA-QLPEI----LK----------LKSFGEP--------ILAAEMASYGVIVNSFE 221 (476)
Q Consensus 166 ~~~~~~~~~~~~~-Pg~~~~~~~~~~-~l~~~----~~----------~~~~~~~--------~~~~~~~~~~~l~~~~~ 221 (476)
.++ |..+ +.+... ..... .. ...+... ..+..... .++.++.+
T Consensus 134 ----------~~~p~~~~--~~~~~~r~~n~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~l~~~~~ 200 (416)
T 1rrv_A 134 ----------PHLPPAYD--EPTTPGVTDIRVLWEERAARFADRYGPTLNRRRAEIGLPPVEDVFGYGHGE-RPLLAADP 200 (416)
T ss_dssp ----------SSSCCCBC--SCCCTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCSCHHHHTTCS-SCEECSCT
T ss_pred ----------cccCCCCC--CCCCchHHHHHHHHHHHHHHHHHHhHHHHHHHHHHcCCCCCCchhhhccCC-CeEEccCc
Confidence 001 1110 001000 00000 00 0011100 00111122 46777777
Q ss_pred hcCHHHHHHHHhccCCceEEeCcccCCCCCcccccccCCCCCCCcccccccccCCCCCceEEEecCCccc-CCHHHHHHH
Q 039701 222 ELEPAYVEEYKNARDGKVWCVGPVSLCNKEDMDKLERGDKTSNDGSGCLKWLDSWQPGSAVYVCLGSLCD-CSTRQLIEL 300 (476)
Q Consensus 222 ~l~~~~~~~~~~~~~~~v~~vGpl~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~GS~~~-~~~~~~~~i 300 (476)
+++++ +..+ ++++|||+...... ..+.++.+|++..+ ++|||++||... ...+.+..+
T Consensus 201 ~l~~~-----~~~~--~~~~vG~~~~~~~~------------~~~~~~~~~l~~~~--~~v~v~~Gs~~~~~~~~~~~~~ 259 (416)
T 1rrv_A 201 VLAPL-----QPDV--DAVQTGAWLLSDER------------PLPPELEAFLAAGS--PPVHIGFGSSSGRGIADAAKVA 259 (416)
T ss_dssp TTSCC-----CSSC--CCEECCCCCCCCCC------------CCCHHHHHHHHSSS--CCEEECCTTCCSHHHHHHHHHH
T ss_pred cccCC-----CCCC--CeeeECCCccCccC------------CCCHHHHHHHhcCC--CeEEEecCCCCccChHHHHHHH
Confidence 77632 1222 78999998764321 12567889997653 589999999864 345667789
Q ss_pred HHHHHhCCCCeEEEEcCCCCCchhHHHHhcCCCeEeeccccHHHhhhCCCceeeecccChhhHHHHHHcCCCEecccccc
Q 039701 301 GLGLEATKKPFIWVIRPGDQAFEKFEERIEGRGLLIRGWAPQVVILSHPAIGGFLTHCGWNSVLEAVSNGLPMVTWPFFA 380 (476)
Q Consensus 301 ~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~nv~~~~~vpq~~ll~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~ 380 (476)
++++++.+.++||+++.... + . ...++|+.+.+|+||.++|+++++ ||||||+||++||+++|||+|++|...
T Consensus 260 ~~al~~~~~~~v~~~g~~~~--~-~--~~~~~~v~~~~~~~~~~ll~~~d~--~v~~~G~~t~~Ea~~~G~P~i~~p~~~ 332 (416)
T 1rrv_A 260 VEAIRAQGRRVILSRGWTEL--V-L--PDDRDDCFAIDEVNFQALFRRVAA--VIHHGSAGTEHVATRAGVPQLVIPRNT 332 (416)
T ss_dssp HHHHHHTTCCEEEECTTTTC--C-C--SCCCTTEEEESSCCHHHHGGGSSE--EEECCCHHHHHHHHHHTCCEEECCCSB
T ss_pred HHHHHHCCCeEEEEeCCccc--c-c--cCCCCCEEEeccCChHHHhccCCE--EEecCChhHHHHHHHcCCCEEEccCCC
Confidence 99999999999999876542 1 1 113789999999999999998888 999999999999999999999999999
Q ss_pred cchhhHHHHHHhhcceEEeccCCCCCCcccccCCcccchhHHHHHHHHHhcCChhhHHHHHHHHHHHHHHHH
Q 039701 381 DQFCNEKLVVQVLRIGVTIGAERPPSLADEERNGVPVKKEDVKKAINMLMDEGEERDERRRRAREYGETAKT 452 (476)
Q Consensus 381 DQ~~~a~~v~e~~g~G~~l~~~~~~~~~~~~~~~~~~t~~~l~~~i~~ll~~~~~~~~~r~~a~~l~~~~~~ 452 (476)
||+.||+++ ++.|+|..++.. .+++++|.++|+++ +|+ +|+++++++++++++
T Consensus 333 dQ~~na~~l-~~~g~g~~~~~~-------------~~~~~~l~~~i~~l-~~~----~~~~~~~~~~~~~~~ 385 (416)
T 1rrv_A 333 DQPYFAGRV-AALGIGVAHDGP-------------TPTFESLSAALTTV-LAP----ETRARAEAVAGMVLT 385 (416)
T ss_dssp THHHHHHHH-HHHTSEEECSSS-------------CCCHHHHHHHHHHH-TSH----HHHHHHHHHTTTCCC
T ss_pred CcHHHHHHH-HHCCCccCCCCC-------------CCCHHHHHHHHHHh-hCH----HHHHHHHHHHHHHhh
Confidence 999999999 599999998765 58999999999999 887 899999999888763
No 10
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=100.00 E-value=4.1e-40 Score=329.19 Aligned_cols=381 Identities=13% Similarity=0.112 Sum_probs=261.0
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHHCCCeEEEEeCCcchhhhhhHhhhcccCCCceEEEEeeCCCcccCCCCCCCC--
Q 039701 8 QLHFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTTPMNAARFQNVIERGIQSGLRIQVIEFYFPCQEVGLPEGCES-- 85 (476)
Q Consensus 8 ~~~vl~~~~p~~GHv~P~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~g~~i~~~~i~~~~~~~~~~~~~~~-- 85 (476)
.+||+|+++++.||++|++.||++|+++||+|+|++++.+.+.+... ++.+..++.+ ++.....
T Consensus 20 m~rIl~~~~~~~GHv~p~l~La~~L~~~Gh~V~v~~~~~~~~~~~~~---------G~~~~~~~~~-----~~~~~~~~~ 85 (415)
T 3rsc_A 20 MAHLLIVNVASHGLILPTLTVVTELVRRGHRVSYVTAGGFAEPVRAA---------GATVVPYQSE-----IIDADAAEV 85 (415)
T ss_dssp CCEEEEECCSCHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHHT---------TCEEEECCCS-----TTTCCHHHH
T ss_pred CCEEEEEeCCCccccccHHHHHHHHHHCCCEEEEEeCHHHHHHHHhc---------CCEEEecccc-----ccccccchh
Confidence 47999999999999999999999999999999999988777766555 5888887632 1111000
Q ss_pred CCCCCCcCcHHH-HHHHHHHchHHHHHHHHhcCCCCeEEEec-CCCchhHHHHhHcCCCcEEEecchHHHHHHHhhhhcc
Q 039701 86 WDKLPSMALLPK-FFAAIEMLRLPLETLFKEIQPKPGCLISD-VCLPWTVSSACKFNVPRIVFHGFSCFCLLCLHSLSVS 163 (476)
Q Consensus 86 ~~~~~~~~~~~~-~~~~~~~~~~~l~~~l~~~~~~~D~vI~D-~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~ 163 (476)
.........+.. +..........+.+++++ .+||+||+| ...+++..+|+++|||++.+.+....... +.....
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~--~~PDlVi~d~~~~~~~~~aA~~~giP~v~~~~~~~~~~~-~~~~~~- 161 (415)
T 3rsc_A 86 FGSDDLGVRPHLMYLRENVSVLRATAEALDG--DVPDLVLYDDFPFIAGQLLAARWRRPAVRLSAAFASNEH-YSFSQD- 161 (415)
T ss_dssp HHSSSSCHHHHHHHHHHHHHHHHHHHHHHSS--SCCSEEEEESTTHHHHHHHHHHTTCCEEEEESSCCCCSS-CCHHHH-
T ss_pred hccccHHHHHHHHHHHHHHHHHHHHHHHHhc--cCCCEEEECchhhhHHHHHHHHhCCCEEEEEecccccCc-cccccc-
Confidence 000011122222 333334455677778877 899999999 67788999999999999997644321000 000000
Q ss_pred ccCCCCCCCCcccccCCCCCcccccccccchhhh-HHHhHHHH------HHhhc-cccEEEecchhhcCHHHHHHHHhcc
Q 039701 164 KAHESVSSDSEYFLVPGLPDRVEITKAQLPEILK-LKSFGEPI------LAAEM-ASYGVIVNSFEELEPAYVEEYKNAR 235 (476)
Q Consensus 164 ~~~~~~~~~~~~~~~Pg~~~~~~~~~~~l~~~~~-~~~~~~~~------~~~~~-~~~~~l~~~~~~l~~~~~~~~~~~~ 235 (476)
..+...+..|. ....... +..+..+. ..... ..+..+......++ .....+
T Consensus 162 ---------~~~~~~~~~p~-------~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~-----~~~~~~ 220 (415)
T 3rsc_A 162 ---------MVTLAGTIDPL-------DLPVFRDTLRDLLAEHGLSRSVVDCWNHVEQLNLVFVPKAFQ-----IAGDTF 220 (415)
T ss_dssp ---------HHHHHTCCCGG-------GCHHHHHHHHHHHHHTTCCCCHHHHHTCCCSEEEESSCTTTS-----TTGGGC
T ss_pred ---------cccccccCChh-------hHHHHHHHHHHHHHHcCCCCChhhhhcCCCCeEEEEcCcccC-----CCcccC
Confidence 00000000000 0000000 11111110 00011 11444444433333 445567
Q ss_pred CCceEEeCcccCCCCCcccccccCCCCCCCcccccccccCCCCCceEEEecCCcccCCHHHHHHHHHHHHhCCCCeEEEE
Q 039701 236 DGKVWCVGPVSLCNKEDMDKLERGDKTSNDGSGCLKWLDSWQPGSAVYVCLGSLCDCSTRQLIELGLGLEATKKPFIWVI 315 (476)
Q Consensus 236 ~~~v~~vGpl~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~GS~~~~~~~~~~~i~~a~~~~~~~~i~~~ 315 (476)
+.++.++||..... .+..+|....+++++||+++||......+.+..+++++++.+++++|.+
T Consensus 221 ~~~~~~vGp~~~~~-----------------~~~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~al~~~~~~~v~~~ 283 (415)
T 3rsc_A 221 DDRFVFVGPCFDDR-----------------RFLGEWTRPADDLPVVLVSLGTTFNDRPGFFRDCARAFDGQPWHVVMTL 283 (415)
T ss_dssp CTTEEECCCCCCCC-----------------GGGCCCCCCSSCCCEEEEECTTTSCCCHHHHHHHHHHHTTSSCEEEEEC
T ss_pred CCceEEeCCCCCCc-----------------ccCcCccccCCCCCEEEEECCCCCCChHHHHHHHHHHHhcCCcEEEEEe
Confidence 78899999986532 2233565545567799999999987677788889999999899999988
Q ss_pred cCCCCCchhHHHHhcCCCeEeeccccHHHhhhCCCceeeecccChhhHHHHHHcCCCEecccccccchhhHHHHHHhhcc
Q 039701 316 RPGDQAFEKFEERIEGRGLLIRGWAPQVVILSHPAIGGFLTHCGWNSVLEAVSNGLPMVTWPFFADQFCNEKLVVQVLRI 395 (476)
Q Consensus 316 ~~~~~~~~~~~~~~~~~nv~~~~~vpq~~ll~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~~a~~v~e~~g~ 395 (476)
+.+.. .+.+.. .++|+.+.+|+|+.++|+++++ +|||||.||++||+++|+|+|++|...||+.||.++ ++.|+
T Consensus 284 g~~~~-~~~l~~--~~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~l-~~~g~ 357 (415)
T 3rsc_A 284 GGQVD-PAALGD--LPPNVEAHRWVPHVKVLEQATV--CVTHGGMGTLMEALYWGRPLVVVPQSFDVQPMARRV-DQLGL 357 (415)
T ss_dssp TTTSC-GGGGCC--CCTTEEEESCCCHHHHHHHEEE--EEESCCHHHHHHHHHTTCCEEECCCSGGGHHHHHHH-HHHTC
T ss_pred CCCCC-hHHhcC--CCCcEEEEecCCHHHHHhhCCE--EEECCcHHHHHHHHHhCCCEEEeCCcchHHHHHHHH-HHcCC
Confidence 76532 222221 3789999999999999999999 999999999999999999999999999999999999 59999
Q ss_pred eEEeccCCCCCCcccccCCcccchhHHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHH
Q 039701 396 GVTIGAERPPSLADEERNGVPVKKEDVKKAINMLMDEGEERDERRRRAREYGETAKTAIEEGGSSYLNIKLLIKDI 471 (476)
Q Consensus 396 G~~l~~~~~~~~~~~~~~~~~~t~~~l~~~i~~ll~~~~~~~~~r~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~i 471 (476)
|..+... .+++++|.++|+++|+|+ +++++++++++++.+ +++..+.++.+.+.+
T Consensus 358 g~~~~~~-------------~~~~~~l~~~i~~ll~~~----~~~~~~~~~~~~~~~----~~~~~~~~~~i~~~~ 412 (415)
T 3rsc_A 358 GAVLPGE-------------KADGDTLLAAVGAVAADP----ALLARVEAMRGHVRR----AGGAARAADAVEAYL 412 (415)
T ss_dssp EEECCGG-------------GCCHHHHHHHHHHHHTCH----HHHHHHHHHHHHHHH----SCHHHHHHHHHHHHH
T ss_pred EEEcccC-------------CCCHHHHHHHHHHHHcCH----HHHHHHHHHHHHHHh----cCHHHHHHHHHHHHh
Confidence 9999776 689999999999999987 899999999888764 455555555554443
No 11
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=100.00 E-value=3.9e-39 Score=320.50 Aligned_cols=384 Identities=16% Similarity=0.154 Sum_probs=257.9
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHHCCCeEEEEeCCcchhhhhhHhhhcccCCCceEEEEeeCCCcccCCCCCCCCCCC
Q 039701 9 LHFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTTPMNAARFQNVIERGIQSGLRIQVIEFYFPCQEVGLPEGCESWDK 88 (476)
Q Consensus 9 ~~vl~~~~p~~GHv~P~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~g~~i~~~~i~~~~~~~~~~~~~~~~~~ 88 (476)
+||+|++.++.||++|++.||++|+++||+|+|++++.+.+.+... ++++..++.+... ... ......
T Consensus 5 ~~il~~~~~~~Ghv~~~~~La~~L~~~GheV~v~~~~~~~~~~~~~---------G~~~~~~~~~~~~--~~~-~~~~~~ 72 (402)
T 3ia7_A 5 RHILFANVQGHGHVYPSLGLVSELARRGHRITYVTTPLFADEVKAA---------GAEVVLYKSEFDT--FHV-PEVVKQ 72 (402)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECHHHHHHHHHT---------TCEEEECCCGGGT--SSS-SSSSCC
T ss_pred CEEEEEeCCCCcccccHHHHHHHHHhCCCEEEEEcCHHHHHHHHHc---------CCEEEeccccccc--ccc-cccccc
Confidence 3999999999999999999999999999999999987666655544 5888877643111 000 000000
Q ss_pred CCCcCcHHH-HHHHHHHchHHHHHHHHhcCCCCeEEEec-CCCchhHHHHhHcCCCcEEEecchHHHHHHHhhhhccccC
Q 039701 89 LPSMALLPK-FFAAIEMLRLPLETLFKEIQPKPGCLISD-VCLPWTVSSACKFNVPRIVFHGFSCFCLLCLHSLSVSKAH 166 (476)
Q Consensus 89 ~~~~~~~~~-~~~~~~~~~~~l~~~l~~~~~~~D~vI~D-~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~~ 166 (476)
......+.. +..........+.+.+++ .+||+||+| ....++..+|+++|||++.+.+....... +.....
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~--~~pD~Vi~d~~~~~~~~~aA~~~giP~v~~~~~~~~~~~-~~~~~~---- 145 (402)
T 3ia7_A 73 EDAETQLHLVYVRENVAILRAAEEALGD--NPPDLVVYDVFPFIAGRLLAARWDRPAVRLTGGFAANEH-YSLFKE---- 145 (402)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHHHTT--CCCSEEEEESTTHHHHHHHHHHHTCCEEEEESSCCCBTT-BCHHHH----
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHhc--cCCCEEEECchHHHHHHHHHHhhCCCEEEEecccccCcc-cccccc----
Confidence 001111222 333333445677777877 899999999 67788999999999999997644321100 000000
Q ss_pred CCCCCCCcccccCCCCCcccccccccchhhh-HHHhHHHH------HHhhc-cccEEEecchhhcCHHHHHHHHhccCCc
Q 039701 167 ESVSSDSEYFLVPGLPDRVEITKAQLPEILK-LKSFGEPI------LAAEM-ASYGVIVNSFEELEPAYVEEYKNARDGK 238 (476)
Q Consensus 167 ~~~~~~~~~~~~Pg~~~~~~~~~~~l~~~~~-~~~~~~~~------~~~~~-~~~~~l~~~~~~l~~~~~~~~~~~~~~~ 238 (476)
..+......|. ....+.. ...+..+. ..... ..+..+.....+++ .....++.+
T Consensus 146 ------~~~~~~~~~~~-------~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~-----~~~~~~~~~ 207 (402)
T 3ia7_A 146 ------LWKSNGQRHPA-------DVEAVHSVLVDLLGKYGVDTPVKEYWDEIEGLTIVFLPKSFQ-----PFAETFDER 207 (402)
T ss_dssp ------HHHHHTCCCGG-------GSHHHHHHHHHHHHTTTCCSCHHHHHTCCCSCEEESSCGGGS-----TTGGGCCTT
T ss_pred ------ccccccccChh-------hHHHHHHHHHHHHHHcCCCCChhhhhcCCCCeEEEEcChHhC-----CccccCCCC
Confidence 00000000000 0000000 11110000 00011 11333443333333 344566788
Q ss_pred eEEeCcccCCCCCcccccccCCCCCCCcccccccccCCCCCceEEEecCCcccCCHHHHHHHHHHHHhCCCCeEEEEcCC
Q 039701 239 VWCVGPVSLCNKEDMDKLERGDKTSNDGSGCLKWLDSWQPGSAVYVCLGSLCDCSTRQLIELGLGLEATKKPFIWVIRPG 318 (476)
Q Consensus 239 v~~vGpl~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~GS~~~~~~~~~~~i~~a~~~~~~~~i~~~~~~ 318 (476)
+.++||..... .+...|+...+++++||+++||......+.+..+++++++.+.+++|..+.+
T Consensus 208 ~~~vGp~~~~~-----------------~~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 270 (402)
T 3ia7_A 208 FAFVGPTLTGR-----------------DGQPGWQPPRPDAPVLLVSLGNQFNEHPEFFRACAQAFADTPWHVVMAIGGF 270 (402)
T ss_dssp EEECCCCCCC---------------------CCCCCSSTTCCEEEEECCSCSSCCHHHHHHHHHHHTTSSCEEEEECCTT
T ss_pred eEEeCCCCCCc-----------------ccCCCCcccCCCCCEEEEECCCCCcchHHHHHHHHHHHhcCCcEEEEEeCCc
Confidence 99999886532 1223455545567799999999987777788889999999899999988765
Q ss_pred CCCchhHHHHhcCCCeEeeccccHHHhhhCCCceeeecccChhhHHHHHHcCCCEecccc-cccchhhHHHHHHhhcceE
Q 039701 319 DQAFEKFEERIEGRGLLIRGWAPQVVILSHPAIGGFLTHCGWNSVLEAVSNGLPMVTWPF-FADQFCNEKLVVQVLRIGV 397 (476)
Q Consensus 319 ~~~~~~~~~~~~~~nv~~~~~vpq~~ll~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~-~~DQ~~~a~~v~e~~g~G~ 397 (476)
.. .+.+.. .++|+.+.+|+|+.++|+++++ +|||||.||++||+++|+|+|++|. ..||+.||.++ ++.|+|.
T Consensus 271 ~~-~~~~~~--~~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Ea~~~G~P~v~~p~~~~~q~~~a~~~-~~~g~g~ 344 (402)
T 3ia7_A 271 LD-PAVLGP--LPPNVEAHQWIPFHSVLAHARA--CLTHGTTGAVLEAFAAGVPLVLVPHFATEAAPSAERV-IELGLGS 344 (402)
T ss_dssp SC-GGGGCS--CCTTEEEESCCCHHHHHTTEEE--EEECCCHHHHHHHHHTTCCEEECGGGCGGGHHHHHHH-HHTTSEE
T ss_pred CC-hhhhCC--CCCcEEEecCCCHHHHHhhCCE--EEECCCHHHHHHHHHhCCCEEEeCCCcccHHHHHHHH-HHcCCEE
Confidence 32 222221 3789999999999999999998 9999999999999999999999999 99999999999 5999999
Q ss_pred EeccCCCCCCcccccCCcccchhHHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHH
Q 039701 398 TIGAERPPSLADEERNGVPVKKEDVKKAINMLMDEGEERDERRRRAREYGETAKTAIEEGGSSYLNIKLLIKDILQ 473 (476)
Q Consensus 398 ~l~~~~~~~~~~~~~~~~~~t~~~l~~~i~~ll~~~~~~~~~r~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~i~~ 473 (476)
.+... .+++++|.++|.++|+|+ +++++++++++++.+ +++..+.++.+.+.+.+
T Consensus 345 ~~~~~-------------~~~~~~l~~~~~~ll~~~----~~~~~~~~~~~~~~~----~~~~~~~~~~i~~~~~~ 399 (402)
T 3ia7_A 345 VLRPD-------------QLEPASIREAVERLAADS----AVRERVRRMQRDILS----SGGPARAADEVEAYLGR 399 (402)
T ss_dssp ECCGG-------------GCSHHHHHHHHHHHHHCH----HHHHHHHHHHHHHHT----SCHHHHHHHHHHHHHHH
T ss_pred EccCC-------------CCCHHHHHHHHHHHHcCH----HHHHHHHHHHHHHhh----CChHHHHHHHHHHHHhh
Confidence 98776 689999999999999987 899999888887653 55556666666555543
No 12
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=100.00 E-value=1.6e-39 Score=323.28 Aligned_cols=350 Identities=15% Similarity=0.069 Sum_probs=242.1
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHHCCCeEEEEeCCcchhhhhhHhhhcccCCCceEEEEeeCCCcccCCCCCCCCCCC
Q 039701 9 LHFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTTPMNAARFQNVIERGIQSGLRIQVIEFYFPCQEVGLPEGCESWDK 88 (476)
Q Consensus 9 ~~vl~~~~p~~GHv~P~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~g~~i~~~~i~~~~~~~~~~~~~~~~~~ 88 (476)
+||+|++.++.||++|++.||++|++|||+|+|++++...+.++.. ++.|..++..... . .. ...
T Consensus 1 MrIli~~~gt~Ghv~p~~~La~~L~~~Gh~V~v~~~~~~~~~v~~~---------g~~~~~l~~~~~~--~-~~---~~~ 65 (404)
T 3h4t_A 1 MGVLITGCGSRGDTEPLVALAARLRELGADARMCLPPDYVERCAEV---------GVPMVPVGRAVRA--G-AR---EPG 65 (404)
T ss_dssp -CEEEEEESSHHHHHHHHHHHHHHHHTTCCEEEEECGGGHHHHHHT---------TCCEEECSSCSSG--G-GS---CTT
T ss_pred CeEEEEeCCCCccHHHHHHHHHHHHHCCCeEEEEeCHHHHHHHHHc---------CCceeecCCCHHH--H-hc---ccc
Confidence 4799999999999999999999999999999999998776666655 5888887643221 1 00 000
Q ss_pred CCCcCcHHHHHHHHHHchHHHHHHHHhcCCCCeEEEecCCCchh---HHHHhHcCCCcEEEecchHHHHHHHhhhhcccc
Q 039701 89 LPSMALLPKFFAAIEMLRLPLETLFKEIQPKPGCLISDVCLPWT---VSSACKFNVPRIVFHGFSCFCLLCLHSLSVSKA 165 (476)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~D~vI~D~~~~~~---~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~ 165 (476)
.........+..........+.+++ .+||+||+|..+..+ ..+|+++|||++.++.++....+
T Consensus 66 ~~~~~~~~~~~~~~~~~~~~l~~~~----~~pD~Vi~~~~~~~~~~a~~~A~~lgiP~v~~~~~p~~~~~---------- 131 (404)
T 3h4t_A 66 ELPPGAAEVVTEVVAEWFDKVPAAI----EGCDAVVTTGLLPAAVAVRSMAEKLGIPYRYTVLSPDHLPS---------- 131 (404)
T ss_dssp CCCTTCGGGHHHHHHHHHHHHHHHH----TTCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGSGG----------
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHh----cCCCEEEECCchhhhhhhhhHHhhcCCCEEEEEcCCccCCC----------
Confidence 0111222333333344444444443 369999999765444 78999999999998877642100
Q ss_pred CCCCCCCCcccccCCCCCcccccccccch-hhh-HHHhHHHHHHhhc-----------cccEEEecchhhcCHHHHHHHH
Q 039701 166 HESVSSDSEYFLVPGLPDRVEITKAQLPE-ILK-LKSFGEPILAAEM-----------ASYGVIVNSFEELEPAYVEEYK 232 (476)
Q Consensus 166 ~~~~~~~~~~~~~Pg~~~~~~~~~~~l~~-~~~-~~~~~~~~~~~~~-----------~~~~~l~~~~~~l~~~~~~~~~ 232 (476)
+... ..+..... ..+ +.+...+....+. ..+..+.+..+.+.+.
T Consensus 132 -------------~~~~----~~~~~~~~~~~~~~~~~~~~~~~~lgl~~~~~~~~~~~~~~~l~~~~~~l~p~------ 188 (404)
T 3h4t_A 132 -------------EQSQ----AERDMYNQGADRLFGDAVNSHRASIGLPPVEHLYDYGYTDQPWLAADPVLSPL------ 188 (404)
T ss_dssp -------------GSCH----HHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHCSSCEECSCTTTSCC------
T ss_pred -------------hhHH----HHHHHHHHHHHHHhHHHHHHHHHHcCCCCCcchhhccccCCeEEeeCcceeCC------
Confidence 0000 00000000 000 1111111110000 0111233333333321
Q ss_pred hccCCceEEeCcccCCCCCcccccccCCCCCCCcccccccccCCCCCceEEEecCCcccCCHHHHHHHHHHHHhCCCCeE
Q 039701 233 NARDGKVWCVGPVSLCNKEDMDKLERGDKTSNDGSGCLKWLDSWQPGSAVYVCLGSLCDCSTRQLIELGLGLEATKKPFI 312 (476)
Q Consensus 233 ~~~~~~v~~vGpl~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~GS~~~~~~~~~~~i~~a~~~~~~~~i 312 (476)
..+++++.++|++..+.... .++++.+|++.. +++|||++||+.. ..+.+..+++++++.++++|
T Consensus 189 ~~~~~~~~~~G~~~~~~~~~------------~~~~l~~~l~~~--~~~Vlv~~Gs~~~-~~~~~~~~~~al~~~~~~vv 253 (404)
T 3h4t_A 189 RPTDLGTVQTGAWILPDQRP------------LSAELEGFLRAG--SPPVYVGFGSGPA-PAEAARVAIEAVRAQGRRVV 253 (404)
T ss_dssp CTTCCSCCBCCCCCCCCCCC------------CCHHHHHHHHTS--SCCEEECCTTSCC-CTTHHHHHHHHHHHTTCCEE
T ss_pred CCCCCCeEEeCccccCCCCC------------CCHHHHHHHhcC--CCeEEEECCCCCC-cHHHHHHHHHHHHhCCCEEE
Confidence 23556888899775543211 257788898753 4689999999987 66778889999999999999
Q ss_pred EEEcCCCCCchhHHHHhcCCCeEeeccccHHHhhhCCCceeeecccChhhHHHHHHcCCCEecccccccchhhHHHHHHh
Q 039701 313 WVIRPGDQAFEKFEERIEGRGLLIRGWAPQVVILSHPAIGGFLTHCGWNSVLEAVSNGLPMVTWPFFADQFCNEKLVVQV 392 (476)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~nv~~~~~vpq~~ll~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~~a~~v~e~ 392 (476)
|+.+..... .. ..++|+.+.+|+||.++|+++++ ||||||+||++||+++|+|+|++|+..||+.||.++ ++
T Consensus 254 ~~~g~~~~~--~~---~~~~~v~~~~~~~~~~ll~~~d~--~v~~gG~~t~~Eal~~GvP~v~~p~~~dQ~~na~~~-~~ 325 (404)
T 3h4t_A 254 LSSGWAGLG--RI---DEGDDCLVVGEVNHQVLFGRVAA--VVHHGGAGTTTAVTRAGAPQVVVPQKADQPYYAGRV-AD 325 (404)
T ss_dssp EECTTTTCC--CS---SCCTTEEEESSCCHHHHGGGSSE--EEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHH-HH
T ss_pred EEeCCcccc--cc---cCCCCEEEecCCCHHHHHhhCcE--EEECCcHHHHHHHHHcCCCEEEcCCcccHHHHHHHH-HH
Confidence 998865421 11 13789999999999999999999 999999999999999999999999999999999999 59
Q ss_pred hcceEEeccCCCCCCcccccCCcccchhHHHHHHHHHhcCChhhHHHHHHHHHHHHHHH
Q 039701 393 LRIGVTIGAERPPSLADEERNGVPVKKEDVKKAINMLMDEGEERDERRRRAREYGETAK 451 (476)
Q Consensus 393 ~g~G~~l~~~~~~~~~~~~~~~~~~t~~~l~~~i~~ll~~~~~~~~~r~~a~~l~~~~~ 451 (476)
.|+|..++.. .+++++|.++|+++++ + +|+++++++++.++
T Consensus 326 ~G~g~~l~~~-------------~~~~~~l~~ai~~ll~-~----~~~~~~~~~~~~~~ 366 (404)
T 3h4t_A 326 LGVGVAHDGP-------------TPTVESLSAALATALT-P----GIRARAAAVAGTIR 366 (404)
T ss_dssp HTSEEECSSS-------------SCCHHHHHHHHHHHTS-H----HHHHHHHHHHTTCC
T ss_pred CCCEeccCcC-------------CCCHHHHHHHHHHHhC-H----HHHHHHHHHHHHHh
Confidence 9999999776 6899999999999998 6 89999999988755
No 13
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}
Probab=100.00 E-value=5.5e-39 Score=322.51 Aligned_cols=373 Identities=18% Similarity=0.193 Sum_probs=244.8
Q ss_pred CCCCCCCCcEEEEEcCCCccChHHHHHHHHHHHHCCCeEEEEeCCcchhhhhhHhhhcccCCCceEEEEeeCCCcccCCC
Q 039701 1 MASQAGSQLHFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTTPMNAARFQNVIERGIQSGLRIQVIEFYFPCQEVGLP 80 (476)
Q Consensus 1 m~~~~~~~~~vl~~~~p~~GHv~P~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~g~~i~~~~i~~~~~~~~~~ 80 (476)
|.+++. .+||+|++.++.||++|++.||++|+++||+|+++++....+.+.+. +++++.++.. .+
T Consensus 1 M~~~m~-m~kIl~~~~~~~Gh~~p~~~la~~L~~~G~~V~~~~~~~~~~~~~~~---------g~~~~~~~~~-----~~ 65 (430)
T 2iyf_A 1 MTTQTT-PAHIAMFSIAAHGHVNPSLEVIRELVARGHRVTYAIPPVFADKVAAT---------GPRPVLYHST-----LP 65 (430)
T ss_dssp --------CEEEEECCSCHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHTT---------SCEEEECCCC-----SC
T ss_pred CCCccc-cceEEEEeCCCCccccchHHHHHHHHHCCCeEEEEeCHHHHHHHHhC---------CCEEEEcCCc-----Cc
Confidence 666544 57999999999999999999999999999999999988665444333 5788776532 11
Q ss_pred CCCCCCCCCCC--cCcHHHHHHHHHHchHHHHHHHHhcCCCCeEEEecCCCchhHHHHhHcCCCcEEEecchHHHHHHHh
Q 039701 81 EGCESWDKLPS--MALLPKFFAAIEMLRLPLETLFKEIQPKPGCLISDVCLPWTVSSACKFNVPRIVFHGFSCFCLLCLH 158 (476)
Q Consensus 81 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~l~~~~~~~D~vI~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~ 158 (476)
........... ...+..+..........+.+++++ .+||+||+|....++..+|+++|||++.+++.+........
T Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~--~~pD~Vi~d~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~ 143 (430)
T 2iyf_A 66 GPDADPEAWGSTLLDNVEPFLNDAIQALPQLADAYAD--DIPDLVLHDITSYPARVLARRWGVPAVSLSPNLVAWKGYEE 143 (430)
T ss_dssp CTTSCGGGGCSSHHHHHHHHHHHHHHHHHHHHHHHTT--SCCSEEEEETTCHHHHHHHHHHTCCEEEEESSCCCCTTHHH
T ss_pred cccccccccchhhHHHHHHHHHHHHHHHHHHHHHhhc--cCCCEEEECCccHHHHHHHHHcCCCEEEEeccccccccccc
Confidence 11111000000 011122222233445667777777 89999999988778999999999999998765421000000
Q ss_pred hhhccccCCCCCCCCcccccCCCCCcccccccccchhhh-HHHhHHH------HHHhhccccEEEecchhhcCHHHHHHH
Q 039701 159 SLSVSKAHESVSSDSEYFLVPGLPDRVEITKAQLPEILK-LKSFGEP------ILAAEMASYGVIVNSFEELEPAYVEEY 231 (476)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~Pg~~~~~~~~~~~l~~~~~-~~~~~~~------~~~~~~~~~~~l~~~~~~l~~~~~~~~ 231 (476)
.+... .. ......|+ ...+.. ..++..+ .......++.++.++..++++.
T Consensus 144 ~~~~~-~~------~~~~~~~~-----------~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~----- 200 (430)
T 2iyf_A 144 EVAEP-MW------REPRQTER-----------GRAYYARFEAWLKENGITEHPDTFASHPPRSLVLIPKALQPH----- 200 (430)
T ss_dssp HTHHH-HH------HHHHHSHH-----------HHHHHHHHHHHHHHTTCCSCHHHHHHCCSSEEECSCGGGSTT-----
T ss_pred ccccc-hh------hhhccchH-----------HHHHHHHHHHHHHHhCCCCCHHHHhcCCCcEEEeCcHHhCCC-----
Confidence 00000 00 00000000 000000 1111111 0011113566777877777632
Q ss_pred HhccCCc-eEEeCcccCCCCCcccccccCCCCCCCcccccccccCCCCCceEEEecCCcccCCHHHHHHHHHHHHhC-CC
Q 039701 232 KNARDGK-VWCVGPVSLCNKEDMDKLERGDKTSNDGSGCLKWLDSWQPGSAVYVCLGSLCDCSTRQLIELGLGLEAT-KK 309 (476)
Q Consensus 232 ~~~~~~~-v~~vGpl~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~GS~~~~~~~~~~~i~~a~~~~-~~ 309 (476)
...++++ ++++||.+.... +..+|.+..+++++||+++||......+.+..+++++++. ++
T Consensus 201 ~~~~~~~~v~~vG~~~~~~~-----------------~~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~l~~~~~~ 263 (430)
T 2iyf_A 201 ADRVDEDVYTFVGACQGDRA-----------------EEGGWQRPAGAEKVVLVSLGSAFTKQPAFYRECVRAFGNLPGW 263 (430)
T ss_dssp GGGSCTTTEEECCCCC----------------------CCCCCCCTTCSEEEEEECTTTCC-CHHHHHHHHHHHTTCTTE
T ss_pred cccCCCccEEEeCCcCCCCC-----------------CCCCCccccCCCCeEEEEcCCCCCCcHHHHHHHHHHHhcCCCe
Confidence 2345677 999998654211 1124555445567999999999854567788899999885 88
Q ss_pred CeEEEEcCCCCCchhHHHHhcCCCeEeeccccHHHhhhCCCceeeecccChhhHHHHHHcCCCEecccccccchhhHHHH
Q 039701 310 PFIWVIRPGDQAFEKFEERIEGRGLLIRGWAPQVVILSHPAIGGFLTHCGWNSVLEAVSNGLPMVTWPFFADQFCNEKLV 389 (476)
Q Consensus 310 ~~i~~~~~~~~~~~~~~~~~~~~nv~~~~~vpq~~ll~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~~a~~v 389 (476)
+++|.++.+.. .+.+.. .++|+.+.+|+||.++|+++++ ||||||+||++||+++|+|+|++|...||+.|+.++
T Consensus 264 ~~~~~~G~~~~-~~~l~~--~~~~v~~~~~~~~~~~l~~ad~--~v~~~G~~t~~Ea~~~G~P~i~~p~~~~q~~~a~~~ 338 (430)
T 2iyf_A 264 HLVLQIGRKVT-PAELGE--LPDNVEVHDWVPQLAILRQADL--FVTHAGAGGSQEGLATATPMIAVPQAVDQFGNADML 338 (430)
T ss_dssp EEEEECC---C-GGGGCS--CCTTEEEESSCCHHHHHTTCSE--EEECCCHHHHHHHHHTTCCEEECCCSHHHHHHHHHH
T ss_pred EEEEEeCCCCC-hHHhcc--CCCCeEEEecCCHHHHhhccCE--EEECCCccHHHHHHHhCCCEEECCCccchHHHHHHH
Confidence 88888876532 122211 3689999999999999999999 999999999999999999999999999999999999
Q ss_pred HHhhcceEEeccCCCCCCcccccCCcccchhHHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHH
Q 039701 390 VQVLRIGVTIGAERPPSLADEERNGVPVKKEDVKKAINMLMDEGEERDERRRRAREYGETAKTA 453 (476)
Q Consensus 390 ~e~~g~G~~l~~~~~~~~~~~~~~~~~~t~~~l~~~i~~ll~~~~~~~~~r~~a~~l~~~~~~~ 453 (476)
++.|+|..+... .+++++|.++|.++++|+ ++++++.+++.++.+.
T Consensus 339 -~~~g~g~~~~~~-------------~~~~~~l~~~i~~ll~~~----~~~~~~~~~~~~~~~~ 384 (430)
T 2iyf_A 339 -QGLGVARKLATE-------------EATADLLRETALALVDDP----EVARRLRRIQAEMAQE 384 (430)
T ss_dssp -HHTTSEEECCCC--------------CCHHHHHHHHHHHHHCH----HHHHHHHHHHHHHHHH
T ss_pred -HHcCCEEEcCCC-------------CCCHHHHHHHHHHHHcCH----HHHHHHHHHHHHHHhc
Confidence 599999988765 589999999999999987 7888888888877654
No 14
>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}
Probab=100.00 E-value=1.5e-38 Score=314.42 Aligned_cols=361 Identities=14% Similarity=0.079 Sum_probs=243.5
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHHCCCeEEEEeCCcchhhhhhHhhhcccCCCceEEEEeeCCCcccCCCCCCCCC-C
Q 039701 9 LHFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTTPMNAARFQNVIERGIQSGLRIQVIEFYFPCQEVGLPEGCESW-D 87 (476)
Q Consensus 9 ~~vl~~~~p~~GHv~P~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~g~~i~~~~i~~~~~~~~~~~~~~~~-~ 87 (476)
+||++++.++.||++|+++||++|+++||+|++++++...+.+... +++++.++.......+....... .
T Consensus 1 MrIl~~~~~~~Gh~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~~~~---------g~~~~~~~~~~~~~~~~~~~~~~~~ 71 (384)
T 2p6p_A 1 MRILFVAAGSPATVFALAPLATAARNAGHQVVMAANQDMGPVVTGV---------GLPAVATTDLPIRHFITTDREGRPE 71 (384)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHT---------TCCEEESCSSCHHHHHHBCTTSCBC
T ss_pred CEEEEEeCCccchHhHHHHHHHHHHHCCCEEEEEeCHHHHHHHHhC---------CCEEEEeCCcchHHHHhhhcccCcc
Confidence 4899999999999999999999999999999999988655444443 57888776331000000000000 0
Q ss_pred CC-CCcCcHHHH-----HHHHHHchHHHHHHHHhcCCCCeEEEecCCCchhHHHHhHcCCCcEEEecchHHHHHHHhhhh
Q 039701 88 KL-PSMALLPKF-----FAAIEMLRLPLETLFKEIQPKPGCLISDVCLPWTVSSACKFNVPRIVFHGFSCFCLLCLHSLS 161 (476)
Q Consensus 88 ~~-~~~~~~~~~-----~~~~~~~~~~l~~~l~~~~~~~D~vI~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~ 161 (476)
.. +.......+ ..........+.+++++ .+||+||+|.+..++..+|+.+|||++.+.+.+..
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~--~~pD~Vi~~~~~~~~~~~a~~~giP~v~~~~~~~~--------- 140 (384)
T 2p6p_A 72 AIPSDPVAQARFTGRWFARMAASSLPRMLDFSRA--WRPDLIVGGTMSYVAPLLALHLGVPHARQTWDAVD--------- 140 (384)
T ss_dssp CCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HCCSEEEEETTCTHHHHHHHHHTCCEEEECCSSCC---------
T ss_pred ccCcchHHHHHHHHHHHHhhHHHHHHHHHHHHhc--cCCcEEEECcchhhHHHHHHhcCCCEEEeccCCcc---------
Confidence 00 100111111 11122345566677777 79999999988788899999999999986533210
Q ss_pred ccccCCCCCCCCcccccCCCCCcccccccccchhhh-HHHhHHHHHH-hhccccEEEecchhhcCHHHHHHHHhccC-Cc
Q 039701 162 VSKAHESVSSDSEYFLVPGLPDRVEITKAQLPEILK-LKSFGEPILA-AEMASYGVIVNSFEELEPAYVEEYKNARD-GK 238 (476)
Q Consensus 162 ~~~~~~~~~~~~~~~~~Pg~~~~~~~~~~~l~~~~~-~~~~~~~~~~-~~~~~~~~l~~~~~~l~~~~~~~~~~~~~-~~ 238 (476)
..+.. ..... ..++..+... ....++.++.++...+++. ..++ .+
T Consensus 141 ----------------~~~~~----------~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~------~~~~~~~ 188 (384)
T 2p6p_A 141 ----------------ADGIH----------PGADAELRPELSELGLERLPAPDLFIDICPPSLRPA------NAAPARM 188 (384)
T ss_dssp ----------------CTTTH----------HHHHHHTHHHHHHTTCSSCCCCSEEEECSCGGGSCT------TSCCCEE
T ss_pred ----------------cchhh----------HHHHHHHHHHHHHcCCCCCCCCCeEEEECCHHHCCC------CCCCCCc
Confidence 00000 00000 1111111100 0011456677776666522 1121 12
Q ss_pred eEEeCcccCCCCCcccccccCCCCCCCcccccccccCCCCCceEEEecCCcccC-----CHHHHHHHHHHHHhCCCCeEE
Q 039701 239 VWCVGPVSLCNKEDMDKLERGDKTSNDGSGCLKWLDSWQPGSAVYVCLGSLCDC-----STRQLIELGLGLEATKKPFIW 313 (476)
Q Consensus 239 v~~vGpl~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~GS~~~~-----~~~~~~~i~~a~~~~~~~~i~ 313 (476)
+.+++ . . .+.++.+|++..+++++||+++||.... ..+.+..+++++++.+++++|
T Consensus 189 ~~~~~-~--~----------------~~~~~~~~l~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~~~~~al~~~~~~~~~ 249 (384)
T 2p6p_A 189 MRHVA-T--S----------------RQCPLEPWMYTRDTRQRVLVTSGSRVAKESYDRNFDFLRGLAKDLVRWDVELIV 249 (384)
T ss_dssp CCCCC-C--C----------------CCCBCCHHHHCCCSSCEEEEECSSSSSCCSSCCCCTTHHHHHHHHHTTTCEEEE
T ss_pred eEecC-C--C----------------CCCCCCchhhcCCCCCEEEEECCCCCccccccccHHHHHHHHHHHhcCCcEEEE
Confidence 22331 1 0 1245668887655567999999998764 446788899999999999999
Q ss_pred EEcCCCCCchhHHHHhcCCCeEeeccccHHHhhhCCCceeeecccChhhHHHHHHcCCCEecccccccchhhHHHHHHhh
Q 039701 314 VIRPGDQAFEKFEERIEGRGLLIRGWAPQVVILSHPAIGGFLTHCGWNSVLEAVSNGLPMVTWPFFADQFCNEKLVVQVL 393 (476)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~nv~~~~~vpq~~ll~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~~a~~v~e~~ 393 (476)
+.++.. .+.+.. .++|+.+ +|+||.++|+++++ ||||||+||++||+++|+|+|++|...||+.||.++ ++.
T Consensus 250 ~~g~~~--~~~l~~--~~~~v~~-~~~~~~~~l~~~d~--~v~~~G~~t~~Ea~~~G~P~v~~p~~~dq~~~a~~~-~~~ 321 (384)
T 2p6p_A 250 AAPDTV--AEALRA--EVPQARV-GWTPLDVVAPTCDL--LVHHAGGVSTLTGLSAGVPQLLIPKGSVLEAPARRV-ADY 321 (384)
T ss_dssp ECCHHH--HHHHHH--HCTTSEE-ECCCHHHHGGGCSE--EEECSCTTHHHHHHHTTCCEEECCCSHHHHHHHHHH-HHH
T ss_pred EeCCCC--HHhhCC--CCCceEE-cCCCHHHHHhhCCE--EEeCCcHHHHHHHHHhCCCEEEccCcccchHHHHHH-HHC
Confidence 887432 222222 3789999 99999999999998 999999999999999999999999999999999999 599
Q ss_pred cceEEeccCCCCCCcccccCCcccchhHHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHH
Q 039701 394 RIGVTIGAERPPSLADEERNGVPVKKEDVKKAINMLMDEGEERDERRRRAREYGETAKTAIEEGGSSYLNIKLLIK 469 (476)
Q Consensus 394 g~G~~l~~~~~~~~~~~~~~~~~~t~~~l~~~i~~ll~~~~~~~~~r~~a~~l~~~~~~~~~~gg~~~~~~~~~~~ 469 (476)
|+|..++.. .+++++|.++|+++|+|+ +++++++++++++++. ++..+.++.+.+
T Consensus 322 g~g~~~~~~-------------~~~~~~l~~~i~~ll~~~----~~~~~~~~~~~~~~~~----~~~~~~~~~i~~ 376 (384)
T 2p6p_A 322 GAAIALLPG-------------EDSTEAIADSCQELQAKD----TYARRAQDLSREISGM----PLPATVVTALEQ 376 (384)
T ss_dssp TSEEECCTT-------------CCCHHHHHHHHHHHHHCH----HHHHHHHHHHHHHHTS----CCHHHHHHHHHH
T ss_pred CCeEecCcC-------------CCCHHHHHHHHHHHHcCH----HHHHHHHHHHHHHHhC----CCHHHHHHHHHH
Confidence 999998765 589999999999999987 8999999999988753 344444444433
No 15
>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=100.00 E-value=8.6e-39 Score=321.99 Aligned_cols=382 Identities=13% Similarity=0.078 Sum_probs=238.7
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHHCCCeEEEEeCCcchhhhhhHhhhcccCCCceEEEEeeCCCcccCCCCC-CCCC
Q 039701 8 QLHFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTTPMNAARFQNVIERGIQSGLRIQVIEFYFPCQEVGLPEG-CESW 86 (476)
Q Consensus 8 ~~~vl~~~~p~~GHv~P~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~g~~i~~~~i~~~~~~~~~~~~-~~~~ 86 (476)
.+||+|++.++.||++|+++||++|+++||+|+|++++.+.+.+... +++|+.++.......+... ....
T Consensus 20 ~mrIl~~~~~~~GHv~p~l~la~~L~~~GheV~~~~~~~~~~~v~~~---------G~~~~~i~~~~~~~~~~~~~~~~~ 90 (441)
T 2yjn_A 20 HMRVVFSSMASKSHLFGLVPLAWAFRAAGHEVRVVASPALTEDITAA---------GLTAVPVGTDVDLVDFMTHAGHDI 90 (441)
T ss_dssp CCEEEEECCSCHHHHTTTHHHHHHHHHTTCEEEEEECGGGHHHHHTT---------TCCEEECSCCCCHHHHHHHTTHHH
T ss_pred ccEEEEEcCCCcchHhHHHHHHHHHHHCCCeEEEEeCchhHHHHHhC---------CCceeecCCccchHHHhhhhhccc
Confidence 47999999999999999999999999999999999998765555444 5888887643100000000 0000
Q ss_pred ------CCC----CC---cCcHHHHHHHHH---------H-chHHHHHHHHhcCCCCeEEEecCCCchhHHHHhHcCCCc
Q 039701 87 ------DKL----PS---MALLPKFFAAIE---------M-LRLPLETLFKEIQPKPGCLISDVCLPWTVSSACKFNVPR 143 (476)
Q Consensus 87 ------~~~----~~---~~~~~~~~~~~~---------~-~~~~l~~~l~~~~~~~D~vI~D~~~~~~~~~A~~~giP~ 143 (476)
... +. ...+........ . ....+.+++++ .+||+||+|..+.++..+|+.+|||+
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~pDlVv~d~~~~~~~~aA~~lgiP~ 168 (441)
T 2yjn_A 91 IDYVRSLDFSERDPATLTWEHLLGMQTVLTPTFYALMSPDTLIEGMVSFCRK--WRPDLVIWEPLTFAAPIAAAVTGTPH 168 (441)
T ss_dssp HHHHTTCCCTTCCGGGGSHHHHHHHHHHHHHHTTTTSSCHHHHHHHHHHHHH--HCCSEEEECTTCTHHHHHHHHHTCCE
T ss_pred ccccccccccccCcchhhhhhhhhHHHHHHHHHHhhcchHHHHHHHHHHHHh--cCCCEEEecCcchhHHHHHHHcCCCE
Confidence 000 00 011111111111 1 34555666677 79999999998788999999999999
Q ss_pred EEEecchHHHHHHHhhhhccccCCCCCCCCcccccCCCCCcccccccccchhhhHHHhHHHHHH-hh----ccccEEEec
Q 039701 144 IVFHGFSCFCLLCLHSLSVSKAHESVSSDSEYFLVPGLPDRVEITKAQLPEILKLKSFGEPILA-AE----MASYGVIVN 218 (476)
Q Consensus 144 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pg~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~----~~~~~~l~~ 218 (476)
+.+...+............ .....|... +... +... +.++..+... .. ...+..+..
T Consensus 169 v~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~----~~~~-~~~~--l~~~~~~~g~~~~~~~~~~~~~~l~~ 230 (441)
T 2yjn_A 169 ARLLWGPDITTRARQNFLG-----------LLPDQPEEH----REDP-LAEW--LTWTLEKYGGPAFDEEVVVGQWTIDP 230 (441)
T ss_dssp EEECSSCCHHHHHHHHHHH-----------HGGGSCTTT----CCCH-HHHH--HHHHHHHTTCCCCCGGGTSCSSEEEC
T ss_pred EEEecCCCcchhhhhhhhh-----------hcccccccc----ccch-HHHH--HHHHHHHcCCCCCCccccCCCeEEEe
Confidence 9986554332111100000 000111100 0000 0000 1111111100 00 001122222
Q ss_pred chhhcCHHHHHHHHhccCCceEEeCcccCCCCCcccccccCCCCCCCcccccccccCCCCCceEEEecCCcccC---CHH
Q 039701 219 SFEELEPAYVEEYKNARDGKVWCVGPVSLCNKEDMDKLERGDKTSNDGSGCLKWLDSWQPGSAVYVCLGSLCDC---STR 295 (476)
Q Consensus 219 ~~~~l~~~~~~~~~~~~~~~v~~vGpl~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~GS~~~~---~~~ 295 (476)
+.+.+++ +..++. ..+++.. ++ .+.++.+|++..+++++|||++||.... ..+
T Consensus 231 ~~~~~~~------~~~~~~--~~~~~~~---------------~~-~~~~~~~~l~~~~~~~~v~v~~Gs~~~~~~~~~~ 286 (441)
T 2yjn_A 231 APAAIRL------DTGLKT--VGMRYVD---------------YN-GPSVVPEWLHDEPERRRVCLTLGISSRENSIGQV 286 (441)
T ss_dssp SCGGGSC------CCCCCE--EECCCCC---------------CC-SSCCCCGGGSSCCSSCEEEEEC----------CC
T ss_pred cCccccC------CCCCCC--CceeeeC---------------CC-CCcccchHhhcCCCCCEEEEECCCCcccccChHH
Confidence 2222221 011110 1111110 00 1345778998766778999999998753 235
Q ss_pred HHHHHHHHHHhCCCCeEEEEcCCCCCchhHHHHhcCCCeEeeccccHHHhhhCCCceeeecccChhhHHHHHHcCCCEec
Q 039701 296 QLIELGLGLEATKKPFIWVIRPGDQAFEKFEERIEGRGLLIRGWAPQVVILSHPAIGGFLTHCGWNSVLEAVSNGLPMVT 375 (476)
Q Consensus 296 ~~~~i~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~nv~~~~~vpq~~ll~~~~~~~~I~HgG~~s~~eal~~GvP~l~ 375 (476)
.+..+++++++.++++||+.++... +.+.. .++|+.+.+|+||.++|+.+++ ||||||+||++||+++|+|+|+
T Consensus 287 ~~~~~~~al~~~~~~~v~~~g~~~~--~~l~~--~~~~v~~~~~~~~~~ll~~ad~--~V~~~G~~t~~Ea~~~G~P~i~ 360 (441)
T 2yjn_A 287 SIEELLGAVGDVDAEIIATFDAQQL--EGVAN--IPDNVRTVGFVPMHALLPTCAA--TVHHGGPGSWHTAAIHGVPQVI 360 (441)
T ss_dssp STTTTHHHHHTSSSEEEECCCTTTT--SSCSS--CCSSEEECCSCCHHHHGGGCSE--EEECCCHHHHHHHHHTTCCEEE
T ss_pred HHHHHHHHHHcCCCEEEEEECCcch--hhhcc--CCCCEEEecCCCHHHHHhhCCE--EEECCCHHHHHHHHHhCCCEEE
Confidence 6677899999899999999875431 12211 3789999999999999999999 9999999999999999999999
Q ss_pred ccccccchhhHHHHHHhhcceEEeccCCCCCCcccccCCcccchhHHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHHh
Q 039701 376 WPFFADQFCNEKLVVQVLRIGVTIGAERPPSLADEERNGVPVKKEDVKKAINMLMDEGEERDERRRRAREYGETAKTAIE 455 (476)
Q Consensus 376 ~P~~~DQ~~~a~~v~e~~g~G~~l~~~~~~~~~~~~~~~~~~t~~~l~~~i~~ll~~~~~~~~~r~~a~~l~~~~~~~~~ 455 (476)
+|...||+.||.++ ++.|+|..++.. .+++++|.++|.++|+|+ +++++++++++++++
T Consensus 361 ~p~~~dQ~~na~~l-~~~g~g~~~~~~-------------~~~~~~l~~~i~~ll~~~----~~~~~~~~~~~~~~~--- 419 (441)
T 2yjn_A 361 LPDGWDTGVRAQRT-QEFGAGIALPVP-------------ELTPDQLRESVKRVLDDP----AHRAGAARMRDDMLA--- 419 (441)
T ss_dssp CCCSHHHHHHHHHH-HHHTSEEECCTT-------------TCCHHHHHHHHHHHHHCH----HHHHHHHHHHHHHHT---
T ss_pred eCCcccHHHHHHHH-HHcCCEEEcccc-------------cCCHHHHHHHHHHHhcCH----HHHHHHHHHHHHHHc---
Confidence 99999999999999 599999998766 689999999999999987 899999999988764
Q ss_pred hCCChHHHHHHHHHH
Q 039701 456 EGGSSYLNIKLLIKD 470 (476)
Q Consensus 456 ~gg~~~~~~~~~~~~ 470 (476)
.++..+.++.+.+.
T Consensus 420 -~~~~~~~~~~i~~~ 433 (441)
T 2yjn_A 420 -EPSPAEVVGICEEL 433 (441)
T ss_dssp -SCCHHHHHHHHHHH
T ss_pred -CCCHHHHHHHHHHH
Confidence 44444554444443
No 16
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=100.00 E-value=1.2e-36 Score=302.25 Aligned_cols=349 Identities=15% Similarity=0.133 Sum_probs=221.0
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHHCCCeEEEEeCCcchhhhhhHhhhcccCCCceEEEEeeCCCcccCCCCC--CCC
Q 039701 8 QLHFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTTPMNAARFQNVIERGIQSGLRIQVIEFYFPCQEVGLPEG--CES 85 (476)
Q Consensus 8 ~~~vl~~~~p~~GHv~P~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~g~~i~~~~i~~~~~~~~~~~~--~~~ 85 (476)
+|||+|++.++.||++|++.||++|+++||+|++++++...+.+... ++.+..++.......+... ...
T Consensus 15 ~MrIl~~~~~~~gh~~~~~~La~~L~~~GheV~v~~~~~~~~~~~~~---------G~~~~~~~~~~~~~~~~~~~~~~~ 85 (398)
T 4fzr_A 15 HMRILVIAGCSEGFVMPLVPLSWALRAAGHEVLVAASENMGPTVTGA---------GLPFAPTCPSLDMPEVLSWDREGN 85 (398)
T ss_dssp CCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEEEGGGHHHHHHT---------TCCEEEEESSCCHHHHHSBCTTSC
T ss_pred ceEEEEEcCCCcchHHHHHHHHHHHHHCCCEEEEEcCHHHHHHHHhC---------CCeeEecCCccchHhhhhhhccCc
Confidence 68999999999999999999999999999999999987666655554 5777777632110000000 000
Q ss_pred CCCCCC--cCcHHH----HHHHHHHchHHHHHHHHhcCCCCeEEEecCCCchhHHHHhHcCCCcEEEecchHHHHHHHhh
Q 039701 86 WDKLPS--MALLPK----FFAAIEMLRLPLETLFKEIQPKPGCLISDVCLPWTVSSACKFNVPRIVFHGFSCFCLLCLHS 159 (476)
Q Consensus 86 ~~~~~~--~~~~~~----~~~~~~~~~~~l~~~l~~~~~~~D~vI~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~ 159 (476)
....+. ...+.. +..........+.+++++ ++||+||+|...+++..+|+.+|||++.+.+.........
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~pDlVv~d~~~~~~~~~a~~~giP~v~~~~~~~~~~~~~-- 161 (398)
T 4fzr_A 86 RTTMPREEKPLLEHIGRGYGRLVLRMRDEALALAER--WKPDLVLTETYSLTGPLVAATLGIPWIEQSIRLASPELIK-- 161 (398)
T ss_dssp BCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HCCSEEEEETTCTHHHHHHHHHTCCEEEECCSSCCCHHHH--
T ss_pred ccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHh--CCCCEEEECccccHHHHHHHhhCCCEEEeccCCCCchhhh--
Confidence 000000 011111 122223445567777888 8999999998778899999999999998654431110000
Q ss_pred hhccccCCCCCCCCcccccCCCCCcccccccccchhhhHHHhHHHHHHhh-----ccccEEEecchhhcCHHHHHHHHhc
Q 039701 160 LSVSKAHESVSSDSEYFLVPGLPDRVEITKAQLPEILKLKSFGEPILAAE-----MASYGVIVNSFEELEPAYVEEYKNA 234 (476)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~Pg~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-----~~~~~~l~~~~~~l~~~~~~~~~~~ 234 (476)
.. ..+.+.+..... ......+......+.. ....
T Consensus 162 ---------------------------------~~---~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~ 200 (398)
T 4fzr_A 162 ---------------------------------SA---GVGELAPELAELGLTDFPDPLLSIDVCPPSMEA-----QPKP 200 (398)
T ss_dssp ---------------------------------HH---HHHHTHHHHHTTTCSSCCCCSEEEECSCGGGC---------C
T ss_pred ---------------------------------HH---HHHHHHHHHHHcCCCCCCCCCeEEEeCChhhCC-----CCCC
Confidence 00 001111111100 0112223222222221 1000
Q ss_pred cCCceEEeCcccCCCCCcccccccCCCCCCCcccccccccCCCCCceEEEecCCcccC--------CHHHHHHHHHHHHh
Q 039701 235 RDGKVWCVGPVSLCNKEDMDKLERGDKTSNDGSGCLKWLDSWQPGSAVYVCLGSLCDC--------STRQLIELGLGLEA 306 (476)
Q Consensus 235 ~~~~v~~vGpl~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~GS~~~~--------~~~~~~~i~~a~~~ 306 (476)
....+.++++. ....++.+|+...+++++||+++||.... ..+.+..+++++++
T Consensus 201 ~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~al~~ 262 (398)
T 4fzr_A 201 GTTKMRYVPYN------------------GRNDQVPSWVFEERKQPRLCLTFGTRVPLPNTNTIPGGLSLLQALSQELPK 262 (398)
T ss_dssp CCEECCCCCCC------------------CSSCCCCHHHHSCCSSCEEECC----------------CCSHHHHHHHGGG
T ss_pred CCCCeeeeCCC------------------CCCCCCchhhhcCCCCCEEEEEccCcccccccccccchHHHHHHHHHHHHh
Confidence 00011111110 01345567776655677999999998653 33567789999999
Q ss_pred CCCCeEEEEcCCCCCchhHHHHhcCCCeEeeccccHHHhhhCCCceeeecccChhhHHHHHHcCCCEecccccccchhhH
Q 039701 307 TKKPFIWVIRPGDQAFEKFEERIEGRGLLIRGWAPQVVILSHPAIGGFLTHCGWNSVLEAVSNGLPMVTWPFFADQFCNE 386 (476)
Q Consensus 307 ~~~~~i~~~~~~~~~~~~~~~~~~~~nv~~~~~vpq~~ll~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~~a 386 (476)
.+.++||+.++.. .+.+.. .++|+.+.+|+|+.++|+++++ ||||||.||++||+++|+|+|++|...||+.|+
T Consensus 263 ~~~~~v~~~~~~~--~~~l~~--~~~~v~~~~~~~~~~ll~~ad~--~v~~gG~~t~~Ea~~~G~P~v~~p~~~~q~~~a 336 (398)
T 4fzr_A 263 LGFEVVVAVSDKL--AQTLQP--LPEGVLAAGQFPLSAIMPACDV--VVHHGGHGTTLTCLSEGVPQVSVPVIAEVWDSA 336 (398)
T ss_dssp GTCEEEECCCC------------CCTTEEEESCCCHHHHGGGCSE--EEECCCHHHHHHHHHTTCCEEECCCSGGGHHHH
T ss_pred CCCEEEEEeCCcc--hhhhcc--CCCcEEEeCcCCHHHHHhhCCE--EEecCCHHHHHHHHHhCCCEEecCCchhHHHHH
Confidence 9999999887654 222322 4789999999999999999999 999999999999999999999999999999999
Q ss_pred HHHHHhhcceEEeccCCCCCCcccccCCcccchhHHHHHHHHHhcCChhhHHHHHHHHHHHHHHHH
Q 039701 387 KLVVQVLRIGVTIGAERPPSLADEERNGVPVKKEDVKKAINMLMDEGEERDERRRRAREYGETAKT 452 (476)
Q Consensus 387 ~~v~e~~g~G~~l~~~~~~~~~~~~~~~~~~t~~~l~~~i~~ll~~~~~~~~~r~~a~~l~~~~~~ 452 (476)
.++ ++.|+|..++.. .+++++|.++|.++|+|+ ++++++++.++++.+
T Consensus 337 ~~~-~~~g~g~~~~~~-------------~~~~~~l~~ai~~ll~~~----~~~~~~~~~~~~~~~ 384 (398)
T 4fzr_A 337 RLL-HAAGAGVEVPWE-------------QAGVESVLAACARIRDDS----SYVGNARRLAAEMAT 384 (398)
T ss_dssp HHH-HHTTSEEECC--------------------CHHHHHHHHHHCT----HHHHHHHHHHHHHTT
T ss_pred HHH-HHcCCEEecCcc-------------cCCHHHHHHHHHHHHhCH----HHHHHHHHHHHHHHc
Confidence 999 599999999876 689999999999999998 899999888888664
No 17
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=100.00 E-value=2.6e-35 Score=292.65 Aligned_cols=346 Identities=17% Similarity=0.178 Sum_probs=230.2
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHHCCCeEEEEeCCcchhhhhhHhhhcccCCCceEEEEeeCCCcccCC--------
Q 039701 8 QLHFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTTPMNAARFQNVIERGIQSGLRIQVIEFYFPCQEVGL-------- 79 (476)
Q Consensus 8 ~~~vl~~~~p~~GHv~P~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~g~~i~~~~i~~~~~~~~~-------- 79 (476)
.+||+|++.++.||++|++.||++|+++||+|+++++ ...+.+... ++.++.++........
T Consensus 20 ~MrIl~~~~~~~Ghv~~~~~La~~L~~~GheV~v~~~-~~~~~~~~~---------G~~~~~~~~~~~~~~~~~~~~~~~ 89 (398)
T 3oti_A 20 HMRVLFVSSPGIGHLFPLIQLAWGFRTAGHDVLIAVA-EHADRAAAA---------GLEVVDVAPDYSAVKVFEQVAKDN 89 (398)
T ss_dssp CCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEES-SCHHHHHTT---------TCEEEESSTTCCHHHHHHHHHHHC
T ss_pred cCEEEEEcCCCcchHhHHHHHHHHHHHCCCEEEEecc-chHHHHHhC---------CCeeEecCCccCHHHHhhhcccCC
Confidence 5899999999999999999999999999999999998 666555544 5888877632100000
Q ss_pred C---CCCCCCCCCCCcCcH-HHHHHHHHHchHHHHHHHHhcCCCCeEEEecCCCchhHHHHhHcCCCcEEEecchHHHHH
Q 039701 80 P---EGCESWDKLPSMALL-PKFFAAIEMLRLPLETLFKEIQPKPGCLISDVCLPWTVSSACKFNVPRIVFHGFSCFCLL 155 (476)
Q Consensus 80 ~---~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~l~~~~~~~D~vI~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~ 155 (476)
+ ..... ........+ ..+..........+.+++++ ++||+||+|...+++..+|+.+|||++.........
T Consensus 90 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~--~~pDlVv~d~~~~~~~~aA~~~giP~v~~~~~~~~~-- 164 (398)
T 3oti_A 90 PRFAETVAT-RPAIDLEEWGVQIAAVNRPLVDGTMALVDD--YRPDLVVYEQGATVGLLAADRAGVPAVQRNQSAWRT-- 164 (398)
T ss_dssp HHHHHTGGG-SCCCSGGGGHHHHHHHHGGGHHHHHHHHHH--HCCSEEEEETTCHHHHHHHHHHTCCEEEECCTTCCC--
T ss_pred ccccccccC-ChhhhHHHHHHHHHHHHHHHHHHHHHHHHH--cCCCEEEECchhhHHHHHHHHcCCCEEEEeccCCCc--
Confidence 0 00000 000011122 22333334566788888888 899999999888889999999999999864332000
Q ss_pred HHhhhhccccCCCCCCCCcccccCCCCCcccccccccchhhhHHHhHHHHHHhhccccEEEecchhhcCHHHHHHHHhcc
Q 039701 156 CLHSLSVSKAHESVSSDSEYFLVPGLPDRVEITKAQLPEILKLKSFGEPILAAEMASYGVIVNSFEELEPAYVEEYKNAR 235 (476)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~Pg~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~ 235 (476)
..... ..... ......+...........+......+. ......
T Consensus 165 -----------------------~~~~~---~~~~~------l~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~ 207 (398)
T 3oti_A 165 -----------------------RGMHR---SIASF------LTDLMDKHQVSLPEPVATIESFPPSLL-----LEAEPE 207 (398)
T ss_dssp -----------------------TTHHH---HHHTT------CHHHHHHTTCCCCCCSEEECSSCGGGG-----TTSCCC
T ss_pred -----------------------cchhh---HHHHH------HHHHHHHcCCCCCCCCeEEEeCCHHHC-----CCCCCC
Confidence 00000 00000 111111110000111222222211111 000000
Q ss_pred CCceEEeCcccCCCCCcccccccCCCCCCCcccccccccCCCCCceEEEecCCcccC--CHHHHHHHHHHHHhCCCCeEE
Q 039701 236 DGKVWCVGPVSLCNKEDMDKLERGDKTSNDGSGCLKWLDSWQPGSAVYVCLGSLCDC--STRQLIELGLGLEATKKPFIW 313 (476)
Q Consensus 236 ~~~v~~vGpl~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~GS~~~~--~~~~~~~i~~a~~~~~~~~i~ 313 (476)
...+.++ |. .....+.+|+...+++++||+++||.... ..+.+..+++++++.+++++|
T Consensus 208 ~~~~~~~-~~------------------~~~~~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~l~~~~~~~v~ 268 (398)
T 3oti_A 208 GWFMRWV-PY------------------GGGAVLGDRLPPVPARPEVAITMGTIELQAFGIGAVEPIIAAAGEVDADFVL 268 (398)
T ss_dssp SBCCCCC-CC------------------CCCEECCSSCCCCCSSCEEEECCTTTHHHHHCGGGHHHHHHHHHTSSSEEEE
T ss_pred CCCcccc-CC------------------CCCcCCchhhhcCCCCCEEEEEcCCCccccCcHHHHHHHHHHHHcCCCEEEE
Confidence 0000111 00 01344567777666678999999999653 456788899999999999999
Q ss_pred EEcCCCCCchhHHHHhcCCCeEeeccccHHHhhhCCCceeeecccChhhHHHHHHcCCCEecccccccchhhH--HHHHH
Q 039701 314 VIRPGDQAFEKFEERIEGRGLLIRGWAPQVVILSHPAIGGFLTHCGWNSVLEAVSNGLPMVTWPFFADQFCNE--KLVVQ 391 (476)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~nv~~~~~vpq~~ll~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~~a--~~v~e 391 (476)
+.++.. .+.+.. .++|+.+.+|+|+.++|+++++ ||||||.||++||+++|+|+|++|...||+.|+ .++ +
T Consensus 269 ~~g~~~--~~~l~~--~~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Eal~~G~P~v~~p~~~dq~~~a~~~~~-~ 341 (398)
T 3oti_A 269 ALGDLD--ISPLGT--LPRNVRAVGWTPLHTLLRTCTA--VVHHGGGGTVMTAIDAGIPQLLAPDPRDQFQHTAREAV-S 341 (398)
T ss_dssp ECTTSC--CGGGCS--CCTTEEEESSCCHHHHHTTCSE--EEECCCHHHHHHHHHHTCCEEECCCTTCCSSCTTHHHH-H
T ss_pred EECCcC--hhhhcc--CCCcEEEEccCCHHHHHhhCCE--EEECCCHHHHHHHHHhCCCEEEcCCCchhHHHHHHHHH-H
Confidence 988764 222221 3789999999999999999999 999999999999999999999999999999999 999 5
Q ss_pred hhcceEEeccCCCCCCcccccCCcccchhHHHHHHHHHhcCChhhHHHHHHHHHHHHHHHH
Q 039701 392 VLRIGVTIGAERPPSLADEERNGVPVKKEDVKKAINMLMDEGEERDERRRRAREYGETAKT 452 (476)
Q Consensus 392 ~~g~G~~l~~~~~~~~~~~~~~~~~~t~~~l~~~i~~ll~~~~~~~~~r~~a~~l~~~~~~ 452 (476)
+.|+|..++.. ..+++.|. ++++|+ +++++++++++++.+
T Consensus 342 ~~g~g~~~~~~-------------~~~~~~l~----~ll~~~----~~~~~~~~~~~~~~~ 381 (398)
T 3oti_A 342 RRGIGLVSTSD-------------KVDADLLR----RLIGDE----SLRTAAREVREEMVA 381 (398)
T ss_dssp HHTSEEECCGG-------------GCCHHHHH----HHHHCH----HHHHHHHHHHHHHHT
T ss_pred HCCCEEeeCCC-------------CCCHHHHH----HHHcCH----HHHHHHHHHHHHHHh
Confidence 99999999776 57888777 788887 899999998888764
No 18
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=100.00 E-value=9e-35 Score=288.09 Aligned_cols=360 Identities=13% Similarity=0.148 Sum_probs=233.8
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHHCCCeEEEEeCCcchhhhhhHhhhcccCCCceEEEEe-eCCCccc-C----CCC
Q 039701 8 QLHFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTTPMNAARFQNVIERGIQSGLRIQVIEF-YFPCQEV-G----LPE 81 (476)
Q Consensus 8 ~~~vl~~~~p~~GHv~P~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~g~~i~~~~i-~~~~~~~-~----~~~ 81 (476)
+|||+|++.++.||++|++.|+++|+++||+|++++++...+.+... ++.++.+ +.+.... . .+.
T Consensus 1 ~MrIl~~~~~~~gh~~~~~~la~~L~~~GheV~v~~~~~~~~~~~~~---------g~~~~~~~~~~~~~~~~~~~~~~~ 71 (391)
T 3tsa_A 1 HMRVLVVPLPYPTHLMAMVPLCWALQASGHEVLIAAPPELQATAHGA---------GLTTAGIRGNDRTGDTGGTTQLRF 71 (391)
T ss_dssp CCEEEEECCSCHHHHHTTHHHHHHHHHTTCEEEEEECHHHHHHHHHB---------TCEEEEC--------------CCS
T ss_pred CcEEEEEcCCCcchhhhHHHHHHHHHHCCCEEEEecChhhHHHHHhC---------CCceeeecCCccchhhhhhhcccc
Confidence 46999999999999999999999999999999999987554444443 5777776 3211000 0 000
Q ss_pred CCCCCCCCCCcCcHHHHHHHHHHc-------hHHHHHHHHhcCCCCeEEEecCCCchhHHHHhHcCCCcEEEecchHHHH
Q 039701 82 GCESWDKLPSMALLPKFFAAIEML-------RLPLETLFKEIQPKPGCLISDVCLPWTVSSACKFNVPRIVFHGFSCFCL 154 (476)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~-------~~~l~~~l~~~~~~~D~vI~D~~~~~~~~~A~~~giP~v~~~~~~~~~~ 154 (476)
................+......+ ...+.+++++ ++||+||+|...+++..+|+.+|||++.+.+......
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~--~~PD~Vv~~~~~~~~~~aa~~~giP~v~~~~~~~~~~ 149 (391)
T 3tsa_A 72 PNPAFGQRDTEAGRQLWEQTASNVAQSSLDQLPEYLRLAEA--WRPSVLLVDVCALIGRVLGGLLDLPVVLHRWGVDPTA 149 (391)
T ss_dssp CCGGGGCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HCCSEEEEETTCHHHHHHHHHTTCCEEEECCSCCCTT
T ss_pred cccccccccchhHHHHHHHHHHHHhhcchhhHHHHHHHHHh--cCCCEEEeCcchhHHHHHHHHhCCCEEEEecCCcccc
Confidence 000000000001111122222233 6677788888 8999999998777888999999999998654321100
Q ss_pred HHHhhhhccccCCCCCCCCcccccCCCCCcccccccccchhhhHHHhHHHHHHhhc-----cccEEEecchhhcCHHHHH
Q 039701 155 LCLHSLSVSKAHESVSSDSEYFLVPGLPDRVEITKAQLPEILKLKSFGEPILAAEM-----ASYGVIVNSFEELEPAYVE 229 (476)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~Pg~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-----~~~~~l~~~~~~l~~~~~~ 229 (476)
. ..... ..+...+...... ..+..+.....+++
T Consensus 150 ----------------------------~-------~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 187 (391)
T 3tsa_A 150 ----------------------------G-------PFSDR--AHELLDPVCRHHGLTGLPTPELILDPCPPSLQ----- 187 (391)
T ss_dssp ----------------------------T-------HHHHH--HHHHHHHHHHHTTSSSSCCCSEEEECSCGGGS-----
T ss_pred ----------------------------c-------cccch--HHHHHHHHHHHcCCCCCCCCceEEEecChhhc-----
Confidence 0 00000 1111111111110 11222322222222
Q ss_pred HHHhccCCceEEeCcccCCCCCcccccccCCCCCCCcccccccccCCCCCceEEEecCCccc--CC-HHHHHHHHHHHHh
Q 039701 230 EYKNARDGKVWCVGPVSLCNKEDMDKLERGDKTSNDGSGCLKWLDSWQPGSAVYVCLGSLCD--CS-TRQLIELGLGLEA 306 (476)
Q Consensus 230 ~~~~~~~~~v~~vGpl~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~GS~~~--~~-~~~~~~i~~a~~~ 306 (476)
.........+.|+ |. .....+..|+...+++++||+++||... .. .+.+..++++ ++
T Consensus 188 ~~~~~~~~~~~~~-p~------------------~~~~~~~~~~~~~~~~~~vlv~~G~~~~~~~~~~~~~~~~~~~-~~ 247 (391)
T 3tsa_A 188 ASDAPQGAPVQYV-PY------------------NGSGAFPAWGAARTSARRVCICMGRMVLNATGPAPLLRAVAAA-TE 247 (391)
T ss_dssp CTTSCCCEECCCC-CC------------------CCCEECCGGGSSCCSSEEEEEECCHHHHHHHCSHHHHHHHHHH-HT
T ss_pred CCCCCccCCeeee-cC------------------CCCcCCCchhhcCCCCCEEEEEcCCCCCcccchHHHHHHHHHh-cc
Confidence 0100000111122 11 0124455787766667899999999854 23 6667778888 87
Q ss_pred C-CCCeEEEEcCCCCCchhHHHHhcCCCeEeeccccHHHhhhCCCceeeecccChhhHHHHHHcCCCEecccccccchhh
Q 039701 307 T-KKPFIWVIRPGDQAFEKFEERIEGRGLLIRGWAPQVVILSHPAIGGFLTHCGWNSVLEAVSNGLPMVTWPFFADQFCN 385 (476)
Q Consensus 307 ~-~~~~i~~~~~~~~~~~~~~~~~~~~nv~~~~~vpq~~ll~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~~ 385 (476)
. +++++|..++.. .+.+.. .++|+.+.+|+|+.++|+.+++ ||||||.||++||+++|+|+|++|...||+.|
T Consensus 248 ~p~~~~v~~~~~~~--~~~l~~--~~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Ea~~~G~P~v~~p~~~~q~~~ 321 (391)
T 3tsa_A 248 LPGVEAVIAVPPEH--RALLTD--LPDNARIAESVPLNLFLRTCEL--VICAGGSGTAFTATRLGIPQLVLPQYFDQFDY 321 (391)
T ss_dssp STTEEEEEECCGGG--GGGCTT--CCTTEEECCSCCGGGTGGGCSE--EEECCCHHHHHHHHHTTCCEEECCCSTTHHHH
T ss_pred CCCeEEEEEECCcc--hhhccc--CCCCEEEeccCCHHHHHhhCCE--EEeCCCHHHHHHHHHhCCCEEecCCcccHHHH
Confidence 7 788888877543 222221 3789999999999999999999 99999999999999999999999999999999
Q ss_pred HHHHHHhhcceEEecc--CCCCCCcccccCCcccchhHHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHHhhCCChHHH
Q 039701 386 EKLVVQVLRIGVTIGA--ERPPSLADEERNGVPVKKEDVKKAINMLMDEGEERDERRRRAREYGETAKTAIEEGGSSYLN 463 (476)
Q Consensus 386 a~~v~e~~g~G~~l~~--~~~~~~~~~~~~~~~~t~~~l~~~i~~ll~~~~~~~~~r~~a~~l~~~~~~~~~~gg~~~~~ 463 (476)
+.++ ++.|+|..+.. . ..+++.|.++|.++|+|+ +++++++++++.+.+ +++..+.
T Consensus 322 a~~~-~~~g~g~~~~~~~~-------------~~~~~~l~~ai~~ll~~~----~~~~~~~~~~~~~~~----~~~~~~~ 379 (391)
T 3tsa_A 322 ARNL-AAAGAGICLPDEQA-------------QSDHEQFTDSIATVLGDT----GFAAAAIKLSDEITA----MPHPAAL 379 (391)
T ss_dssp HHHH-HHTTSEEECCSHHH-------------HTCHHHHHHHHHHHHTCT----HHHHHHHHHHHHHHT----SCCHHHH
T ss_pred HHHH-HHcCCEEecCcccc-------------cCCHHHHHHHHHHHHcCH----HHHHHHHHHHHHHHc----CCCHHHH
Confidence 9999 59999999977 5 589999999999999998 888888888877653 4454444
Q ss_pred HHHHH
Q 039701 464 IKLLI 468 (476)
Q Consensus 464 ~~~~~ 468 (476)
++.+.
T Consensus 380 ~~~i~ 384 (391)
T 3tsa_A 380 VRTLE 384 (391)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 44443
No 19
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=100.00 E-value=5.6e-32 Score=269.86 Aligned_cols=367 Identities=16% Similarity=0.193 Sum_probs=239.2
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHHCCCeEEEEeCCcchhhhhhHhhhcccCCCceEEEEeeCCCcc-------cCCC
Q 039701 8 QLHFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTTPMNAARFQNVIERGIQSGLRIQVIEFYFPCQE-------VGLP 80 (476)
Q Consensus 8 ~~~vl~~~~p~~GHv~P~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~g~~i~~~~i~~~~~~-------~~~~ 80 (476)
++||+|++.++.||++|++.||++|+++||+|++++++...+.+... +++++.++..... ....
T Consensus 20 ~MrIl~~~~~~~Gh~~~~~~la~~L~~~GheV~v~~~~~~~~~~~~~---------g~~~~~~~~~~~~~~~~~~~~~~~ 90 (412)
T 3otg_A 20 HMRVLFASLGTHGHTYPLLPLATAARAAGHEVTFATGEGFAGTLRKL---------GFEPVATGMPVFDGFLAALRIRFD 90 (412)
T ss_dssp SCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHHT---------TCEEEECCCCHHHHHHHHHHHHHS
T ss_pred eeEEEEEcCCCcccHHHHHHHHHHHHHCCCEEEEEccHHHHHHHHhc---------CCceeecCcccccchhhhhhhhhc
Confidence 78999999999999999999999999999999999987654444333 5788876620000 0000
Q ss_pred CCC-CCCCCCCCcCcHHHHH-HH-HHHchHHHHHHHHhcCCCCeEEEecCCCchhHHHHhHcCCCcEEEecchHHHHHHH
Q 039701 81 EGC-ESWDKLPSMALLPKFF-AA-IEMLRLPLETLFKEIQPKPGCLISDVCLPWTVSSACKFNVPRIVFHGFSCFCLLCL 157 (476)
Q Consensus 81 ~~~-~~~~~~~~~~~~~~~~-~~-~~~~~~~l~~~l~~~~~~~D~vI~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~ 157 (476)
... ...........+.... .. .......+.+++++ .+||+||+|....++..+|+.+|||+|.........
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~--~~pDvVv~~~~~~~~~~aa~~~giP~v~~~~~~~~~---- 164 (412)
T 3otg_A 91 TDSPEGLTPEQLSELPQIVFGRVIPQRVFDELQPVIER--LRPDLVVQEISNYGAGLAALKAGIPTICHGVGRDTP---- 164 (412)
T ss_dssp CSCCTTCCHHHHTTSHHHHHHTHHHHHHHHHHHHHHHH--HCCSEEEEETTCHHHHHHHHHHTCCEEEECCSCCCC----
T ss_pred ccCCccCChhHhhHHHHHHHhccchHHHHHHHHHHHHh--cCCCEEEECchhhHHHHHHHHcCCCEEEecccccCc----
Confidence 000 0000000001111221 11 22334677778888 899999999877778899999999999854332100
Q ss_pred hhhhccccCCCCCCCCcccccCCCCCcccccccccchhhhHHHhHHHHHHh----------hccccEEEecchhhcCHHH
Q 039701 158 HSLSVSKAHESVSSDSEYFLVPGLPDRVEITKAQLPEILKLKSFGEPILAA----------EMASYGVIVNSFEELEPAY 227 (476)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~Pg~~~~~~~~~~~l~~~~~~~~~~~~~~~~----------~~~~~~~l~~~~~~l~~~~ 227 (476)
++. ... +.+...+.... ...++.++..+...++.
T Consensus 165 ---------------------~~~----------~~~---~~~~~~~~~~~~g~~~~~~~~~~~~d~~i~~~~~~~~~-- 208 (412)
T 3otg_A 165 ---------------------DDL----------TRS---IEEEVRGLAQRLGLDLPPGRIDGFGNPFIDIFPPSLQE-- 208 (412)
T ss_dssp ---------------------SHH----------HHH---HHHHHHHHHHHTTCCCCSSCCGGGGCCEEECSCGGGSC--
T ss_pred ---------------------hhh----------hHH---HHHHHHHHHHHcCCCCCcccccCCCCeEEeeCCHHhcC--
Confidence 000 000 00111111111 11233344444333331
Q ss_pred HHHHHhccCCceEEeCcccCCCCCcccccccCCCCCCCccccccc-ccCCCCCceEEEecCCcccCCHHHHHHHHHHHHh
Q 039701 228 VEEYKNARDGKVWCVGPVSLCNKEDMDKLERGDKTSNDGSGCLKW-LDSWQPGSAVYVCLGSLCDCSTRQLIELGLGLEA 306 (476)
Q Consensus 228 ~~~~~~~~~~~v~~vGpl~~~~~~~~~~~~~~~~~~~~~~~l~~~-l~~~~~~~vv~vs~GS~~~~~~~~~~~i~~a~~~ 306 (476)
....+......+.+.... ...+..+| ....+++++|++++||......+.+..+++++++
T Consensus 209 ---~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~vlv~~G~~~~~~~~~~~~~~~~l~~ 269 (412)
T 3otg_A 209 ---PEFRARPRRHELRPVPFA----------------EQGDLPAWLSSRDTARPLVYLTLGTSSGGTVEVLRAAIDGLAG 269 (412)
T ss_dssp ---HHHHTCTTEEECCCCCCC----------------CCCCCCGGGGGSCTTSCEEEEECTTTTCSCHHHHHHHHHHHHT
T ss_pred ---CcccCCCCcceeeccCCC----------------CCCCCCCccccccCCCCEEEEEcCCCCcCcHHHHHHHHHHHHc
Confidence 111111111111111100 02334456 3333456799999999975567888889999998
Q ss_pred CCCCeEEEEcCCCCCchhHHHHhcCCCeEeeccccHHHhhhCCCceeeecccChhhHHHHHHcCCCEecccccccchhhH
Q 039701 307 TKKPFIWVIRPGDQAFEKFEERIEGRGLLIRGWAPQVVILSHPAIGGFLTHCGWNSVLEAVSNGLPMVTWPFFADQFCNE 386 (476)
Q Consensus 307 ~~~~~i~~~~~~~~~~~~~~~~~~~~nv~~~~~vpq~~ll~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~~a 386 (476)
.+.+++|..++... .+.+.+ .++|+.+.+|+|+.++|+++++ ||+|||.||++||+++|+|+|++|...||..|+
T Consensus 270 ~~~~~~~~~g~~~~-~~~l~~--~~~~v~~~~~~~~~~~l~~ad~--~v~~~g~~t~~Ea~a~G~P~v~~p~~~~q~~~~ 344 (412)
T 3otg_A 270 LDADVLVASGPSLD-VSGLGE--VPANVRLESWVPQAALLPHVDL--VVHHGGSGTTLGALGAGVPQLSFPWAGDSFANA 344 (412)
T ss_dssp SSSEEEEECCSSCC-CTTCCC--CCTTEEEESCCCHHHHGGGCSE--EEESCCHHHHHHHHHHTCCEEECCCSTTHHHHH
T ss_pred CCCEEEEEECCCCC-hhhhcc--CCCcEEEeCCCCHHHHHhcCcE--EEECCchHHHHHHHHhCCCEEecCCchhHHHHH
Confidence 89999999876541 112211 3689999999999999999999 999999999999999999999999999999999
Q ss_pred HHHHHhhcceEEeccCCCCCCcccccCCcccchhHHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHHhhCCChHHHHHH
Q 039701 387 KLVVQVLRIGVTIGAERPPSLADEERNGVPVKKEDVKKAINMLMDEGEERDERRRRAREYGETAKTAIEEGGSSYLNIKL 466 (476)
Q Consensus 387 ~~v~e~~g~G~~l~~~~~~~~~~~~~~~~~~t~~~l~~~i~~ll~~~~~~~~~r~~a~~l~~~~~~~~~~gg~~~~~~~~ 466 (476)
..+ ++.|+|..+... .+++++|.++|.++++|+ ++++++.+.+.++.+ ..+..+.++.
T Consensus 345 ~~v-~~~g~g~~~~~~-------------~~~~~~l~~ai~~ll~~~----~~~~~~~~~~~~~~~----~~~~~~~~~~ 402 (412)
T 3otg_A 345 QAV-AQAGAGDHLLPD-------------NISPDSVSGAAKRLLAEE----SYRAGARAVAAEIAA----MPGPDEVVRL 402 (412)
T ss_dssp HHH-HHHTSEEECCGG-------------GCCHHHHHHHHHHHHHCH----HHHHHHHHHHHHHHH----SCCHHHHHTT
T ss_pred HHH-HHcCCEEecCcc-------------cCCHHHHHHHHHHHHhCH----HHHHHHHHHHHHHhc----CCCHHHHHHH
Confidence 999 599999999876 589999999999999988 777777777776554 3455555554
Q ss_pred HHHHH
Q 039701 467 LIKDI 471 (476)
Q Consensus 467 ~~~~i 471 (476)
+.+.+
T Consensus 403 ~~~l~ 407 (412)
T 3otg_A 403 LPGFA 407 (412)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 44433
No 20
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=100.00 E-value=4.6e-31 Score=258.20 Aligned_cols=340 Identities=14% Similarity=0.087 Sum_probs=216.0
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHHCCCeEEEEeCCcchh--hhhhHhhhcccCCCceEEEEeeCCCcccCCCCCCCC
Q 039701 8 QLHFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTTPMNAA--RFQNVIERGIQSGLRIQVIEFYFPCQEVGLPEGCES 85 (476)
Q Consensus 8 ~~~vl~~~~p~~GHv~P~l~La~~L~~rGH~Vt~~~~~~~~~--~~~~~~~~~~~~g~~i~~~~i~~~~~~~~~~~~~~~ 85 (476)
+.||+|.+-|+.||++|.++||++|+++||+|+|+++....+ .+.+. ++.++.++.. ++..
T Consensus 2 ~~~i~i~~GGTgGHi~palala~~L~~~g~~V~~vg~~~g~e~~~v~~~---------g~~~~~i~~~----~~~~---- 64 (365)
T 3s2u_A 2 KGNVLIMAGGTGGHVFPALACAREFQARGYAVHWLGTPRGIENDLVPKA---------GLPLHLIQVS----GLRG---- 64 (365)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECSSSTHHHHTGGG---------TCCEEECC--------------
T ss_pred CCcEEEEcCCCHHHHHHHHHHHHHHHhCCCEEEEEECCchHhhchhhhc---------CCcEEEEECC----CcCC----
Confidence 469999998888999999999999999999999999875432 22332 4666666532 1111
Q ss_pred CCCCCCcCcHHHHHHHHHHchHHHHHHHHhcCCCCeEEEecCCC--chhHHHHhHcCCCcEEEecchHHHHHHHhhhhcc
Q 039701 86 WDKLPSMALLPKFFAAIEMLRLPLETLFKEIQPKPGCLISDVCL--PWTVSSACKFNVPRIVFHGFSCFCLLCLHSLSVS 163 (476)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~D~vI~D~~~--~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~ 163 (476)
............+... .....+++++ .+||+||++..+ ..+..+|+.+|||+++.
T Consensus 65 ~~~~~~~~~~~~~~~~----~~~~~~~l~~--~~PDvVi~~g~~~s~p~~laA~~~~iP~vih----------------- 121 (365)
T 3s2u_A 65 KGLKSLVKAPLELLKS----LFQALRVIRQ--LRPVCVLGLGGYVTGPGGLAARLNGVPLVIH----------------- 121 (365)
T ss_dssp --------CHHHHHHH----HHHHHHHHHH--HCCSEEEECSSSTHHHHHHHHHHTTCCEEEE-----------------
T ss_pred CCHHHHHHHHHHHHHH----HHHHHHHHHh--cCCCEEEEcCCcchHHHHHHHHHcCCCEEEE-----------------
Confidence 0000011111222222 2234566777 799999998754 34578899999999962
Q ss_pred ccCCCCCCCCcccccCCCCCcccccccccchhhhHHHhHHHHHHhhccccEEEecchhhcCHHHHHHHHhccCCceEEeC
Q 039701 164 KAHESVSSDSEYFLVPGLPDRVEITKAQLPEILKLKSFGEPILAAEMASYGVIVNSFEELEPAYVEEYKNARDGKVWCVG 243 (476)
Q Consensus 164 ~~~~~~~~~~~~~~~Pg~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~v~~vG 243 (476)
+...+||+.. ++ . .+.++.++......+. ...+..++|
T Consensus 122 ----------e~n~~~G~~n----------------r~----l--~~~a~~v~~~~~~~~~----------~~~k~~~~g 159 (365)
T 3s2u_A 122 ----------EQNAVAGTAN----------------RS----L--APIARRVCEAFPDTFP----------ASDKRLTTG 159 (365)
T ss_dssp ----------ECSSSCCHHH----------------HH----H--GGGCSEEEESSTTSSC----------C---CEECC
T ss_pred ----------ecchhhhhHH----------------Hh----h--ccccceeeeccccccc----------CcCcEEEEC
Confidence 2233444321 11 1 1123333332211111 125567777
Q ss_pred cccCCCCCcccccccCCCCCCCcccccccccCCCCCceEEEecCCcccCCHHHHHHHHHHHHhC----CCCeEEEEcCCC
Q 039701 244 PVSLCNKEDMDKLERGDKTSNDGSGCLKWLDSWQPGSAVYVCLGSLCDCSTRQLIELGLGLEAT----KKPFIWVIRPGD 319 (476)
Q Consensus 244 pl~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~GS~~~~~~~~~~~i~~a~~~~----~~~~i~~~~~~~ 319 (476)
+.+.+.... +. .......+++++|++..||.... ...+.+.++++.. +..++|.++...
T Consensus 160 ~pvr~~~~~-------------~~--~~~~~~~~~~~~ilv~gGs~g~~--~~~~~~~~al~~l~~~~~~~vi~~~G~~~ 222 (365)
T 3s2u_A 160 NPVRGELFL-------------DA--HARAPLTGRRVNLLVLGGSLGAE--PLNKLLPEALAQVPLEIRPAIRHQAGRQH 222 (365)
T ss_dssp CCCCGGGCC-------------CT--TSSCCCTTSCCEEEECCTTTTCS--HHHHHHHHHHHTSCTTTCCEEEEECCTTT
T ss_pred CCCchhhcc-------------ch--hhhcccCCCCcEEEEECCcCCcc--ccchhhHHHHHhcccccceEEEEecCccc
Confidence 544332111 01 11111223456899998987653 2223456666644 355666666543
Q ss_pred CCchhHHHHh--cCCCeEeeccccHH-HhhhCCCceeeecccChhhHHHHHHcCCCEeccccc----ccchhhHHHHHHh
Q 039701 320 QAFEKFEERI--EGRGLLIRGWAPQV-VILSHPAIGGFLTHCGWNSVLEAVSNGLPMVTWPFF----ADQFCNEKLVVQV 392 (476)
Q Consensus 320 ~~~~~~~~~~--~~~nv~~~~~vpq~-~ll~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~----~DQ~~~a~~v~e~ 392 (476)
.+...+.. .+.++.+.+|+++. ++|..+++ +|||+|.+|++|++++|+|+|.+|+. .+|..||+.+ ++
T Consensus 223 --~~~~~~~~~~~~~~~~v~~f~~dm~~~l~~aDl--vI~raG~~Tv~E~~a~G~P~Ilip~p~~~~~~Q~~NA~~l-~~ 297 (365)
T 3s2u_A 223 --AEITAERYRTVAVEADVAPFISDMAAAYAWADL--VICRAGALTVSELTAAGLPAFLVPLPHAIDDHQTRNAEFL-VR 297 (365)
T ss_dssp --HHHHHHHHHHTTCCCEEESCCSCHHHHHHHCSE--EEECCCHHHHHHHHHHTCCEEECC-----CCHHHHHHHHH-HT
T ss_pred --cccccceecccccccccccchhhhhhhhccceE--EEecCCcchHHHHHHhCCCeEEeccCCCCCcHHHHHHHHH-HH
Confidence 33333322 35689999999976 69999999 99999999999999999999999984 5899999999 59
Q ss_pred hcceEEeccCCCCCCcccccCCcccchhHHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHH
Q 039701 393 LRIGVTIGAERPPSLADEERNGVPVKKEDVKKAINMLMDEGEERDERRRRAREYGETAKTAIEEGGSSYLNIKLLIKDIL 472 (476)
Q Consensus 393 ~g~G~~l~~~~~~~~~~~~~~~~~~t~~~l~~~i~~ll~~~~~~~~~r~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~i~ 472 (476)
.|+|..++.. .++++.|.++|.++++|++..++|++++++++.. ++.+.+++.|+
T Consensus 298 ~G~a~~l~~~-------------~~~~~~L~~~i~~ll~d~~~~~~m~~~a~~~~~~------------~aa~~ia~~i~ 352 (365)
T 3s2u_A 298 SGAGRLLPQK-------------STGAAELAAQLSEVLMHPETLRSMADQARSLAKP------------EATRTVVDACL 352 (365)
T ss_dssp TTSEEECCTT-------------TCCHHHHHHHHHHHHHCTHHHHHHHHHHHHTCCT------------THHHHHHHHHH
T ss_pred CCCEEEeecC-------------CCCHHHHHHHHHHHHCCHHHHHHHHHHHHhcCCc------------cHHHHHHHHHH
Confidence 9999999776 6999999999999999998777777777766432 45566677777
Q ss_pred HhcC
Q 039701 473 QQAK 476 (476)
Q Consensus 473 ~~~~ 476 (476)
+++|
T Consensus 353 ~lar 356 (365)
T 3s2u_A 353 EVAR 356 (365)
T ss_dssp HHC-
T ss_pred HHHc
Confidence 6653
No 21
>2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens}
Probab=99.94 E-value=7.2e-27 Score=203.22 Aligned_cols=161 Identities=21% Similarity=0.354 Sum_probs=138.2
Q ss_pred cccccccccCCCCCceEEEecCCccc-CCHHHHHHHHHHHHhCCCCeEEEEcCCCCCchhHHHHhcCCCeEeeccccHHH
Q 039701 266 GSGCLKWLDSWQPGSAVYVCLGSLCD-CSTRQLIELGLGLEATKKPFIWVIRPGDQAFEKFEERIEGRGLLIRGWAPQVV 344 (476)
Q Consensus 266 ~~~l~~~l~~~~~~~vv~vs~GS~~~-~~~~~~~~i~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~nv~~~~~vpq~~ 344 (476)
++++.+|++..+++++|||++||... ...+.+..+++++++.+.+++|+.++.. .+. .++|+.+.+|+||.+
T Consensus 8 ~~~~~~~l~~~~~~~~vlv~~Gs~~~~~~~~~~~~~~~al~~~~~~~~~~~g~~~--~~~-----~~~~v~~~~~~~~~~ 80 (170)
T 2o6l_A 8 PKEMEDFVQSSGENGVVVFSLGSMVSNMTEERANVIASALAQIPQKVLWRFDGNK--PDT-----LGLNTRLYKWIPQND 80 (170)
T ss_dssp CHHHHHHHHTTTTTCEEEEECCSCCTTCCHHHHHHHHHHHTTSSSEEEEECCSSC--CTT-----CCTTEEEESSCCHHH
T ss_pred CHHHHHHHHcCCCCCEEEEECCCCcccCCHHHHHHHHHHHHhCCCeEEEEECCcC--ccc-----CCCcEEEecCCCHHH
Confidence 67899999877667799999999863 4677888899999988999999987653 111 367999999999999
Q ss_pred hhhCCCceeeecccChhhHHHHHHcCCCEecccccccchhhHHHHHHhhcceEEeccCCCCCCcccccCCcccchhHHHH
Q 039701 345 ILSHPAIGGFLTHCGWNSVLEAVSNGLPMVTWPFFADQFCNEKLVVQVLRIGVTIGAERPPSLADEERNGVPVKKEDVKK 424 (476)
Q Consensus 345 ll~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~~a~~v~e~~g~G~~l~~~~~~~~~~~~~~~~~~t~~~l~~ 424 (476)
+|.++.+++||||||.||++||+++|+|+|++|...||..||.++ ++.|+|..++.. .++.++|.+
T Consensus 81 ~l~~~~ad~~I~~~G~~t~~Ea~~~G~P~i~~p~~~~Q~~na~~l-~~~g~g~~~~~~-------------~~~~~~l~~ 146 (170)
T 2o6l_A 81 LLGHPKTRAFITHGGANGIYEAIYHGIPMVGIPLFADQPDNIAHM-KARGAAVRVDFN-------------TMSSTDLLN 146 (170)
T ss_dssp HHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHH-HTTTSEEECCTT-------------TCCHHHHHH
T ss_pred HhcCCCcCEEEEcCCccHHHHHHHcCCCEEeccchhhHHHHHHHH-HHcCCeEEeccc-------------cCCHHHHHH
Confidence 996666666999999999999999999999999999999999999 599999998766 689999999
Q ss_pred HHHHHhcCChhhHHHHHHHHHHHHHHH
Q 039701 425 AINMLMDEGEERDERRRRAREYGETAK 451 (476)
Q Consensus 425 ~i~~ll~~~~~~~~~r~~a~~l~~~~~ 451 (476)
+|.++++|+ +|+++++++++.++
T Consensus 147 ~i~~ll~~~----~~~~~a~~~~~~~~ 169 (170)
T 2o6l_A 147 ALKRVINDP----SYKENVMKLSRIQH 169 (170)
T ss_dssp HHHHHHHCH----HHHHHHHHHC----
T ss_pred HHHHHHcCH----HHHHHHHHHHHHhh
Confidence 999999987 89999999998876
No 22
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=99.87 E-value=2e-20 Score=182.97 Aligned_cols=320 Identities=14% Similarity=0.061 Sum_probs=199.1
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHHCCCeEEEEeCCcchhhhhhHhhhcccCCCceEEEEeeCCCcccCCCCCCCCCCC
Q 039701 9 LHFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTTPMNAARFQNVIERGIQSGLRIQVIEFYFPCQEVGLPEGCESWDK 88 (476)
Q Consensus 9 ~~vl~~~~p~~GHv~P~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~g~~i~~~~i~~~~~~~~~~~~~~~~~~ 88 (476)
+||++++.+..||..+++.||+.|.++||+|++++...... ..... ..+++++.++... +.. .
T Consensus 7 mkIl~~~~~~gG~~~~~~~la~~L~~~G~~V~v~~~~~~~~--~~~~~-----~~g~~~~~~~~~~----~~~----~-- 69 (364)
T 1f0k_A 7 KRLMVMAGGTGGHVFPGLAVAHHLMAQGWQVRWLGTADRME--ADLVP-----KHGIEIDFIRISG----LRG----K-- 69 (364)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHTTTCEEEEEECTTSTH--HHHGG-----GGTCEEEECCCCC----CTT----C--
T ss_pred cEEEEEeCCCccchhHHHHHHHHHHHcCCEEEEEecCCcch--hhhcc-----ccCCceEEecCCc----cCc----C--
Confidence 79999998888999999999999999999999998764321 11111 1146776654321 111 0
Q ss_pred CCCcCcHHHHHHHHHHchHHHHHHHHhcCCCCeEEEecCCC--chhHHHHhHcCCCcEEEecchHHHHHHHhhhhccccC
Q 039701 89 LPSMALLPKFFAAIEMLRLPLETLFKEIQPKPGCLISDVCL--PWTVSSACKFNVPRIVFHGFSCFCLLCLHSLSVSKAH 166 (476)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~D~vI~D~~~--~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~~ 166 (476)
.....+...... ......+.+++++ .+||+|+++... ..+..+++.+++|++......
T Consensus 70 -~~~~~~~~~~~~-~~~~~~l~~~l~~--~~pDvv~~~~~~~~~~~~~~~~~~~~p~v~~~~~~---------------- 129 (364)
T 1f0k_A 70 -GIKALIAAPLRI-FNAWRQARAIMKA--YKPDVVLGMGGYVSGPGGLAAWSLGIPVVLHEQNG---------------- 129 (364)
T ss_dssp -CHHHHHTCHHHH-HHHHHHHHHHHHH--HCCSEEEECSSTTHHHHHHHHHHTTCCEEEEECSS----------------
T ss_pred -ccHHHHHHHHHH-HHHHHHHHHHHHh--cCCCEEEEeCCcCchHHHHHHHHcCCCEEEEecCC----------------
Confidence 000001011111 1223456667777 799999998743 345678889999998632210
Q ss_pred CCCCCCCcccccCCCCCcccccccccchhhhHHHhHHHHHHhhccccEEEecchhhcCHHHHHHHHhccCCceEEeCccc
Q 039701 167 ESVSSDSEYFLVPGLPDRVEITKAQLPEILKLKSFGEPILAAEMASYGVIVNSFEELEPAYVEEYKNARDGKVWCVGPVS 246 (476)
Q Consensus 167 ~~~~~~~~~~~~Pg~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~v~~vGpl~ 246 (476)
.|+. . .+. ..+.++.++..+-.. + +++..+|.-+
T Consensus 130 -----------~~~~----------------~----~~~--~~~~~d~v~~~~~~~------------~-~~~~~i~n~v 163 (364)
T 1f0k_A 130 -----------IAGL----------------T----NKW--LAKIATKVMQAFPGA------------F-PNAEVVGNPV 163 (364)
T ss_dssp -----------SCCH----------------H----HHH--HTTTCSEEEESSTTS------------S-SSCEECCCCC
T ss_pred -----------CCcH----------------H----HHH--HHHhCCEEEecChhh------------c-CCceEeCCcc
Confidence 0110 0 011 122344555433211 2 2455666432
Q ss_pred CCCCCcccccccCCCCCCCcccccccccCCCCCceEEEecCCcccCCHHHHHHHHHHHHhC--CCCeEEEEcCCCCCchh
Q 039701 247 LCNKEDMDKLERGDKTSNDGSGCLKWLDSWQPGSAVYVCLGSLCDCSTRQLIELGLGLEAT--KKPFIWVIRPGDQAFEK 324 (476)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~GS~~~~~~~~~~~i~~a~~~~--~~~~i~~~~~~~~~~~~ 324 (476)
...... .....+.+...+++++|++..|+... .+....+++|++.. +.++++.++.+. .+.
T Consensus 164 ~~~~~~-------------~~~~~~~~~~~~~~~~il~~~g~~~~--~k~~~~li~a~~~l~~~~~~l~i~G~~~--~~~ 226 (364)
T 1f0k_A 164 RTDVLA-------------LPLPQQRLAGREGPVRVLVVGGSQGA--RILNQTMPQVAAKLGDSVTIWHQSGKGS--QQS 226 (364)
T ss_dssp CHHHHT-------------SCCHHHHHTTCCSSEEEEEECTTTCC--HHHHHHHHHHHHHHGGGEEEEEECCTTC--HHH
T ss_pred chhhcc-------------cchhhhhcccCCCCcEEEEEcCchHh--HHHHHHHHHHHHHhcCCcEEEEEcCCch--HHH
Confidence 211000 00111122222334567777788653 44455566777654 466667676654 233
Q ss_pred HHHHhc---CCCeEeecccc-HHHhhhCCCceeeecccChhhHHHHHHcCCCEeccccc---ccchhhHHHHHHhhcceE
Q 039701 325 FEERIE---GRGLLIRGWAP-QVVILSHPAIGGFLTHCGWNSVLEAVSNGLPMVTWPFF---ADQFCNEKLVVQVLRIGV 397 (476)
Q Consensus 325 ~~~~~~---~~nv~~~~~vp-q~~ll~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~---~DQ~~~a~~v~e~~g~G~ 397 (476)
+.+... .+||.+.+|++ ...++..+++ +|+++|.+++.||+++|+|+|+.|.. .||..|+..+. +.|.|.
T Consensus 227 l~~~~~~~~~~~v~~~g~~~~~~~~~~~ad~--~v~~sg~~~~~EAma~G~Pvi~~~~~g~~~~q~~~~~~~~-~~g~g~ 303 (364)
T 1f0k_A 227 VEQAYAEAGQPQHKVTEFIDDMAAAYAWADV--VVCRSGALTVSEIAAAGLPALFVPFQHKDRQQYWNALPLE-KAGAAK 303 (364)
T ss_dssp HHHHHHHTTCTTSEEESCCSCHHHHHHHCSE--EEECCCHHHHHHHHHHTCCEEECCCCCTTCHHHHHHHHHH-HTTSEE
T ss_pred HHHHHhhcCCCceEEecchhhHHHHHHhCCE--EEECCchHHHHHHHHhCCCEEEeeCCCCchhHHHHHHHHH-hCCcEE
Confidence 433221 25899999995 4679999999 99999999999999999999999998 79999999994 999998
Q ss_pred EeccCCCCCCcccccCCcccchhHHHHHHHHHhcCChhhHHHHHHHHHH
Q 039701 398 TIGAERPPSLADEERNGVPVKKEDVKKAINMLMDEGEERDERRRRAREY 446 (476)
Q Consensus 398 ~l~~~~~~~~~~~~~~~~~~t~~~l~~~i~~ll~~~~~~~~~r~~a~~l 446 (476)
.++.. .++.++|.++|.++ |++..+.+.++++++
T Consensus 304 ~~~~~-------------d~~~~~la~~i~~l--~~~~~~~~~~~~~~~ 337 (364)
T 1f0k_A 304 IIEQP-------------QLSVDAVANTLAGW--SRETLLTMAERARAA 337 (364)
T ss_dssp ECCGG-------------GCCHHHHHHHHHTC--CHHHHHHHHHHHHHT
T ss_pred Eeccc-------------cCCHHHHHHHHHhc--CHHHHHHHHHHHHHh
Confidence 88765 57799999999999 675555555555444
No 23
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*
Probab=99.62 E-value=4.8e-15 Score=137.65 Aligned_cols=118 Identities=9% Similarity=0.057 Sum_probs=91.9
Q ss_pred CceEEEecCCcccCCHHHHHHHHHHHHhCCCCeEEEEcCCCCCchhHHHHh-cCCCeEeeccccHH-HhhhCCCceeeec
Q 039701 279 GSAVYVCLGSLCDCSTRQLIELGLGLEATKKPFIWVIRPGDQAFEKFEERI-EGRGLLIRGWAPQV-VILSHPAIGGFLT 356 (476)
Q Consensus 279 ~~vv~vs~GS~~~~~~~~~~~i~~a~~~~~~~~i~~~~~~~~~~~~~~~~~-~~~nv~~~~~vpq~-~ll~~~~~~~~I~ 356 (476)
.+.|+|++|..... .....+++++.... ++.++.+.+....+.+.... ...|+.+..|+++. ++|..+++ +|+
T Consensus 157 ~~~ILv~~GG~d~~--~l~~~vl~~L~~~~-~i~vv~G~~~~~~~~l~~~~~~~~~v~v~~~~~~m~~~m~~aDl--vI~ 231 (282)
T 3hbm_A 157 KYDFFICMGGTDIK--NLSLQIASELPKTK-IISIATSSSNPNLKKLQKFAKLHNNIRLFIDHENIAKLMNESNK--LII 231 (282)
T ss_dssp CEEEEEECCSCCTT--CHHHHHHHHSCTTS-CEEEEECTTCTTHHHHHHHHHTCSSEEEEESCSCHHHHHHTEEE--EEE
T ss_pred CCeEEEEECCCchh--hHHHHHHHHhhcCC-CEEEEECCCchHHHHHHHHHhhCCCEEEEeCHHHHHHHHHHCCE--EEE
Confidence 45799999975432 34556788887654 56677766654334444332 23589999999977 59999999 999
Q ss_pred ccChhhHHHHHHcCCCEecccccccchhhHHHHHHhhcceEEeccCC
Q 039701 357 HCGWNSVLEAVSNGLPMVTWPFFADQFCNEKLVVQVLRIGVTIGAER 403 (476)
Q Consensus 357 HgG~~s~~eal~~GvP~l~~P~~~DQ~~~a~~v~e~~g~G~~l~~~~ 403 (476)
+|| +|++|+++.|+|+|++|...+|..||..+ ++.|++..+..-+
T Consensus 232 ~gG-~T~~E~~~~g~P~i~ip~~~~Q~~nA~~l-~~~G~~~~~~~~~ 276 (282)
T 3hbm_A 232 SAS-SLVNEALLLKANFKAICYVKNQESTATWL-AKKGYEVEYKYLE 276 (282)
T ss_dssp ESS-HHHHHHHHTTCCEEEECCSGGGHHHHHHH-HHTTCEEECGGGS
T ss_pred CCc-HHHHHHHHcCCCEEEEeCCCCHHHHHHHH-HHCCCEEEcchhh
Confidence 999 89999999999999999999999999999 5999999887653
No 24
>2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A
Probab=99.57 E-value=1.1e-14 Score=129.79 Aligned_cols=119 Identities=13% Similarity=0.092 Sum_probs=88.0
Q ss_pred CCCceEEEecCCcccCCHHHHHHH-----HHHHHhCC-CCeEEEEcCCCC-CchhHHHHh--------cC----------
Q 039701 277 QPGSAVYVCLGSLCDCSTRQLIEL-----GLGLEATK-KPFIWVIRPGDQ-AFEKFEERI--------EG---------- 331 (476)
Q Consensus 277 ~~~~vv~vs~GS~~~~~~~~~~~i-----~~a~~~~~-~~~i~~~~~~~~-~~~~~~~~~--------~~---------- 331 (476)
+++++|||+.||.... .+.+..+ ++++.+.+ .++++.++.... ..+.+.... .|
T Consensus 26 ~~~~~VlVtgGS~~~~-n~li~~vl~~~~l~~L~~~~~~~vv~q~G~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~ 104 (224)
T 2jzc_A 26 IEEKALFVTCGATVPF-PKLVSCVLSDEFCQELIQYGFVRLIIQFGRNYSSEFEHLVQERGGQRESQKIPIDQFGCGDTA 104 (224)
T ss_dssp CCSCCEEEECCSCCSC-HHHHHHHTSHHHHHHHHTTTCCCEEECCCSSSCCCCCSHHHHHTCEECSCCCSSCTTCTTCSC
T ss_pred CCCCEEEEEcCCchHH-HHHHHHHHHHHHHHHHhcCCCeEEEEEECCCchhhHHHHHHhhhccccccccccccccccccc
Confidence 4467899999997422 3333333 48887777 789999887642 112221111 01
Q ss_pred ---------CCeEeeccccHH-Hhhh-CCCceeeecccChhhHHHHHHcCCCEeccccc----ccchhhHHHHHHhhcce
Q 039701 332 ---------RGLLIRGWAPQV-VILS-HPAIGGFLTHCGWNSVLEAVSNGLPMVTWPFF----ADQFCNEKLVVQVLRIG 396 (476)
Q Consensus 332 ---------~nv~~~~~vpq~-~ll~-~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~----~DQ~~~a~~v~e~~g~G 396 (476)
-++.+.+|+++. ++|+ .+++ +|||||.||++|++++|+|+|++|.. .||..||+++ ++.|+|
T Consensus 105 ~~~~~~~~~~~v~v~~f~~~m~~~l~~~Adl--vIshaGagTv~Eal~~G~P~IvVP~~~~~~~HQ~~nA~~l-~~~G~~ 181 (224)
T 2jzc_A 105 RQYVLMNGKLKVIGFDFSTKMQSIIRDYSDL--VISHAGTGSILDSLRLNKPLIVCVNDSLMDNHQQQIADKF-VELGYV 181 (224)
T ss_dssp EEEESTTTSSEEEECCSSSSHHHHHHHHCSC--EEESSCHHHHHHHHHTTCCCCEECCSSCCCCHHHHHHHHH-HHHSCC
T ss_pred cccccccCCceEEEeeccchHHHHHHhcCCE--EEECCcHHHHHHHHHhCCCEEEEcCcccccchHHHHHHHH-HHCCCE
Confidence 145677888876 7999 9999 99999999999999999999999984 4799999999 599998
Q ss_pred EEe
Q 039701 397 VTI 399 (476)
Q Consensus 397 ~~l 399 (476)
..+
T Consensus 182 ~~~ 184 (224)
T 2jzc_A 182 WSC 184 (224)
T ss_dssp CEE
T ss_pred EEc
Confidence 654
No 25
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=99.46 E-value=5.5e-11 Score=116.77 Aligned_cols=346 Identities=12% Similarity=0.022 Sum_probs=195.7
Q ss_pred CcEEEEEcC--C--CccChHHHHHHHHHHHHCCCeEEEEeCCcchhhhhhHhhhcccCCCceEEEEeeCCCcccCCCCCC
Q 039701 8 QLHFILFPF--L--AQGHMIPMIDIARLLAQHGALVTIVTTPMNAARFQNVIERGIQSGLRIQVIEFYFPCQEVGLPEGC 83 (476)
Q Consensus 8 ~~~vl~~~~--p--~~GHv~P~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~g~~i~~~~i~~~~~~~~~~~~~ 83 (476)
++||++++. + ..|.-.-+..|++.| +||+|++++............. ..++.+..++....
T Consensus 4 ~mkIl~v~~~~~p~~gG~~~~~~~l~~~L--~g~~v~v~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~-------- 68 (394)
T 3okp_A 4 SRKTLVVTNDFPPRIGGIQSYLRDFIATQ--DPESIVVFASTQNAEEAHAYDK-----TLDYEVIRWPRSVM-------- 68 (394)
T ss_dssp CCCEEEEESCCTTSCSHHHHHHHHHHTTS--CGGGEEEEEECSSHHHHHHHHT-----TCSSEEEEESSSSC--------
T ss_pred CceEEEEeCccCCccchHHHHHHHHHHHh--cCCeEEEEECCCCccchhhhcc-----ccceEEEEcccccc--------
Confidence 678999975 3 467888889999999 7999999987655432222211 23566666542100
Q ss_pred CCCCCCCCcCcHHHHHHHHHHchHHHHHHHHhcCCCCeEEEecCCC--chhHHHHhHcCCCcEEE-ecchHHHHHHHhhh
Q 039701 84 ESWDKLPSMALLPKFFAAIEMLRLPLETLFKEIQPKPGCLISDVCL--PWTVSSACKFNVPRIVF-HGFSCFCLLCLHSL 160 (476)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~D~vI~D~~~--~~~~~~A~~~giP~v~~-~~~~~~~~~~~~~~ 160 (476)
. ... .....+.+++++ .+||+|++.... .....+++.+++|.+++ .......+.
T Consensus 69 -----~---~~~--------~~~~~l~~~~~~--~~~Dvv~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~----- 125 (394)
T 3okp_A 69 -----L---PTP--------TTAHAMAEIIRE--REIDNVWFGAAAPLALMAGTAKQAGASKVIASTHGHEVGWS----- 125 (394)
T ss_dssp -----C---SCH--------HHHHHHHHHHHH--TTCSEEEESSCTTGGGGHHHHHHTTCSEEEEECCSTHHHHT-----
T ss_pred -----c---cch--------hhHHHHHHHHHh--cCCCEEEECCcchHHHHHHHHHhcCCCcEEEEeccchhhhh-----
Confidence 0 111 223456777888 899999986643 34567789999995543 222211100
Q ss_pred hccccCCCCCCCCcccccCCCCCcccccccccchhhhHHHhHHHHHHhhccccEEEecchhhcCHHHHHHHHhcc--CCc
Q 039701 161 SVSKAHESVSSDSEYFLVPGLPDRVEITKAQLPEILKLKSFGEPILAAEMASYGVIVNSFEELEPAYVEEYKNAR--DGK 238 (476)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~Pg~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~--~~~ 238 (476)
. .+ . .... .....+.++.++..+-... +.+...+ ..+
T Consensus 126 -------------------~-----------~~-~--~~~~---~~~~~~~~d~ii~~s~~~~-----~~~~~~~~~~~~ 164 (394)
T 3okp_A 126 -------------------M-----------LP-G--SRQS---LRKIGTEVDVLTYISQYTL-----RRFKSAFGSHPT 164 (394)
T ss_dssp -------------------T-----------SH-H--HHHH---HHHHHHHCSEEEESCHHHH-----HHHHHHHCSSSE
T ss_pred -------------------h-----------cc-h--hhHH---HHHHHHhCCEEEEcCHHHH-----HHHHHhcCCCCC
Confidence 0 00 0 1111 1223355677776663321 1222211 245
Q ss_pred eEEeCcccCCCCCcc-cccccCCCCCCCcccccccccCCCCCceEEEecCCcccCCHHHHHHHHHHHHh-----CCCCeE
Q 039701 239 VWCVGPVSLCNKEDM-DKLERGDKTSNDGSGCLKWLDSWQPGSAVYVCLGSLCDCSTRQLIELGLGLEA-----TKKPFI 312 (476)
Q Consensus 239 v~~vGpl~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~GS~~~~~~~~~~~i~~a~~~-----~~~~~i 312 (476)
+..+..-+....... .. ....++.+.+.-.++ ..+++..|+... .+.+..+++|++. .+.+++
T Consensus 165 ~~vi~ngv~~~~~~~~~~--------~~~~~~~~~~~~~~~-~~~i~~~G~~~~--~Kg~~~li~a~~~l~~~~~~~~l~ 233 (394)
T 3okp_A 165 FEHLPSGVDVKRFTPATP--------EDKSATRKKLGFTDT-TPVIACNSRLVP--RKGQDSLIKAMPQVIAARPDAQLL 233 (394)
T ss_dssp EEECCCCBCTTTSCCCCH--------HHHHHHHHHTTCCTT-CCEEEEESCSCG--GGCHHHHHHHHHHHHHHSTTCEEE
T ss_pred eEEecCCcCHHHcCCCCc--------hhhHHHHHhcCCCcC-ceEEEEEecccc--ccCHHHHHHHHHHHHhhCCCeEEE
Confidence 666654332211000 00 001222333322222 245667787643 2334444555443 245555
Q ss_pred EEEcCCCCCchhHHHHh--cCCCeEeeccccHHH---hhhCCCceeeec-----------ccChhhHHHHHHcCCCEecc
Q 039701 313 WVIRPGDQAFEKFEERI--EGRGLLIRGWAPQVV---ILSHPAIGGFLT-----------HCGWNSVLEAVSNGLPMVTW 376 (476)
Q Consensus 313 ~~~~~~~~~~~~~~~~~--~~~nv~~~~~vpq~~---ll~~~~~~~~I~-----------HgG~~s~~eal~~GvP~l~~ 376 (476)
+.-.+.. .+.+.+.. ..+++.+.+++|+.+ ++..+++ +|. -|.-+++.||+++|+|+|+.
T Consensus 234 i~G~g~~--~~~l~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~--~v~ps~~~~~~~~~e~~~~~~~Ea~a~G~PvI~~ 309 (394)
T 3okp_A 234 IVGSGRY--ESTLRRLATDVSQNVKFLGRLEYQDMINTLAAADI--FAMPARTRGGGLDVEGLGIVYLEAQACGVPVIAG 309 (394)
T ss_dssp EECCCTT--HHHHHHHTGGGGGGEEEEESCCHHHHHHHHHHCSE--EEECCCCBGGGTBCCSSCHHHHHHHHTTCCEEEC
T ss_pred EEcCchH--HHHHHHHHhcccCeEEEcCCCCHHHHHHHHHhCCE--EEecCccccccccccccCcHHHHHHHcCCCEEEe
Confidence 5433222 23333322 247999999997554 7888998 776 55567899999999999997
Q ss_pred cccccchhhHHHHHHhhcceEEeccCCCCCCcccccCCcccchhHHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHHhh
Q 039701 377 PFFADQFCNEKLVVQVLRIGVTIGAERPPSLADEERNGVPVKKEDVKKAINMLMDEGEERDERRRRAREYGETAKTAIEE 456 (476)
Q Consensus 377 P~~~DQ~~~a~~v~e~~g~G~~l~~~~~~~~~~~~~~~~~~t~~~l~~~i~~ll~~~~~~~~~r~~a~~l~~~~~~~~~~ 456 (476)
+.. .....+ +. |.|...+.. +.+++.++|.++++|++..+++.+++++....
T Consensus 310 ~~~----~~~e~i-~~-~~g~~~~~~---------------d~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~------- 361 (394)
T 3okp_A 310 TSG----GAPETV-TP-ATGLVVEGS---------------DVDKLSELLIELLDDPIRRAAMGAAGRAHVEA------- 361 (394)
T ss_dssp SST----TGGGGC-CT-TTEEECCTT---------------CHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHH-------
T ss_pred CCC----ChHHHH-hc-CCceEeCCC---------------CHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHH-------
Confidence 653 333344 23 367666443 78999999999999887677777777765544
Q ss_pred CCChHHHHHHHHHHHHHhc
Q 039701 457 GGSSYLNIKLLIKDILQQA 475 (476)
Q Consensus 457 gg~~~~~~~~~~~~i~~~~ 475 (476)
.-+.....+.+.+.++++.
T Consensus 362 ~~s~~~~~~~~~~~~~~~~ 380 (394)
T 3okp_A 362 EWSWEIMGERLTNILQSEP 380 (394)
T ss_dssp HTBHHHHHHHHHHHHHSCC
T ss_pred hCCHHHHHHHHHHHHHHhc
Confidence 2233366777777766543
No 26
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=99.45 E-value=8e-11 Score=117.52 Aligned_cols=368 Identities=14% Similarity=0.048 Sum_probs=191.6
Q ss_pred CcEEEEEcC---C--------CccChHHHHHHHHHHHHCCCeEEEEeCCcchhhhhhHhhhcccCCCceEEEEeeCCCcc
Q 039701 8 QLHFILFPF---L--------AQGHMIPMIDIARLLAQHGALVTIVTTPMNAARFQNVIERGIQSGLRIQVIEFYFPCQE 76 (476)
Q Consensus 8 ~~~vl~~~~---p--------~~GHv~P~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~g~~i~~~~i~~~~~~ 76 (476)
.+||++++. | ..|+-.....|++.|.++||+|++++.......- .. . ....+++++.++.....
T Consensus 20 mmkIl~i~~~~~p~~~~~~~~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~-~~-~---~~~~~v~v~~~~~~~~~ 94 (438)
T 3c48_A 20 HMRVAMISMHTSPLQQPGTGDSGGMNVYILSTATELAKQGIEVDIYTRATRPSQG-EI-V---RVAENLRVINIAAGPYE 94 (438)
T ss_dssp CCEEEEECTTSCTTCC-------CHHHHHHHHHHHHHHTTCEEEEEEECCCGGGC-SE-E---EEETTEEEEEECCSCSS
T ss_pred hheeeeEEeeccccccCCCCCCCCHHHHHHHHHHHHHhcCCEEEEEecCCCCCCc-cc-c---cccCCeEEEEecCCCcc
Confidence 579999995 2 3678889999999999999999999865432110 00 0 00124666665532110
Q ss_pred cCCCCCCCCCCCCCCcCcHHHHHHHHHHchHHHHHH-HHhcCCCCeEEEecCCC--chhHHHHhHcCCCcEEEecchHHH
Q 039701 77 VGLPEGCESWDKLPSMALLPKFFAAIEMLRLPLETL-FKEIQPKPGCLISDVCL--PWTVSSACKFNVPRIVFHGFSCFC 153 (476)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-l~~~~~~~D~vI~D~~~--~~~~~~A~~~giP~v~~~~~~~~~ 153 (476)
. .........+. .....+.+. ++.. .+||+|++.... ..+..+++.+++|+|.........
T Consensus 95 ----~-------~~~~~~~~~~~----~~~~~~~~~~~~~~-~~~Div~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~ 158 (438)
T 3c48_A 95 ----G-------LSKEELPTQLA----AFTGGMLSFTRREK-VTYDLIHSHYWLSGQVGWLLRDLWRIPLIHTAHTLAAV 158 (438)
T ss_dssp ----S-------CCGGGGGGGHH----HHHHHHHHHHHHHT-CCCSEEEEEHHHHHHHHHHHHHHHTCCEEEECSSCHHH
T ss_pred ----c-------cchhHHHHHHH----HHHHHHHHHHHhcc-CCCCEEEeCCccHHHHHHHHHHHcCCCEEEEecCCccc
Confidence 0 00001111111 111222233 4441 359999987632 234567788899998865544221
Q ss_pred HHHHhhhhccccCCCCCCCCcccccCCCCCcccccccccchhhhHHHhHHHHHHhhccccEEEecchhhcCHHHHHHHHh
Q 039701 154 LLCLHSLSVSKAHESVSSDSEYFLVPGLPDRVEITKAQLPEILKLKSFGEPILAAEMASYGVIVNSFEELEPAYVEEYKN 233 (476)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~Pg~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~ 233 (476)
.. ..+. ....+... ...... ......++.++..+-...+ .+..
T Consensus 159 ~~-----------------------~~~~------~~~~~~~~-~~~~~~--~~~~~~~d~ii~~s~~~~~-----~~~~ 201 (438)
T 3c48_A 159 KN-----------------------SYRD------DSDTPESE-ARRICE--QQLVDNADVLAVNTQEEMQ-----DLMH 201 (438)
T ss_dssp HS-----------------------CC----------CCHHHH-HHHHHH--HHHHHHCSEEEESSHHHHH-----HHHH
T ss_pred cc-----------------------cccc------ccCCcchH-HHHHHH--HHHHhcCCEEEEcCHHHHH-----HHHH
Confidence 10 0000 00000000 111111 1234457777776633221 2222
Q ss_pred cc---CCceEEeCcccCCCCCcccccccCCCCCCCcccccccccCCCCCceEEEecCCcccCCHHHHHHHHHHHHhC---
Q 039701 234 AR---DGKVWCVGPVSLCNKEDMDKLERGDKTSNDGSGCLKWLDSWQPGSAVYVCLGSLCDCSTRQLIELGLGLEAT--- 307 (476)
Q Consensus 234 ~~---~~~v~~vGpl~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~GS~~~~~~~~~~~i~~a~~~~--- 307 (476)
.+ ..++..|..-+....-... .....+.+.+-+.-.+++ .+++..|+... .+.+..+++|++..
T Consensus 202 ~~g~~~~k~~vi~ngvd~~~~~~~-------~~~~~~~~r~~~~~~~~~-~~i~~~G~~~~--~Kg~~~li~a~~~l~~~ 271 (438)
T 3c48_A 202 HYDADPDRISVVSPGADVELYSPG-------NDRATERSRRELGIPLHT-KVVAFVGRLQP--FKGPQVLIKAVAALFDR 271 (438)
T ss_dssp HHCCCGGGEEECCCCCCTTTSCCC-----------CHHHHHHTTCCSSS-EEEEEESCBSG--GGCHHHHHHHHHHHHHH
T ss_pred HhCCChhheEEecCCccccccCCc-------ccchhhhhHHhcCCCCCC-cEEEEEeeecc--cCCHHHHHHHHHHHHhh
Confidence 11 1345555543322110000 000001122223222223 45666787653 23344444554432
Q ss_pred ----CCCeEEEEcCC---CCCchhHHHHh----cCCCeEeeccccHH---HhhhCCCceeeecc----cChhhHHHHHHc
Q 039701 308 ----KKPFIWVIRPG---DQAFEKFEERI----EGRGLLIRGWAPQV---VILSHPAIGGFLTH----CGWNSVLEAVSN 369 (476)
Q Consensus 308 ----~~~~i~~~~~~---~~~~~~~~~~~----~~~nv~~~~~vpq~---~ll~~~~~~~~I~H----gG~~s~~eal~~ 369 (476)
+.++++ ++.. ....+.+.+.. ..++|.+.+++|+. .++..+++ +|.- |..+++.||+++
T Consensus 272 ~p~~~~~l~i-~G~~~~~g~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~e~~~~~~~Eama~ 348 (438)
T 3c48_A 272 DPDRNLRVII-CGGPSGPNATPDTYRHMAEELGVEKRIRFLDPRPPSELVAVYRAADI--VAVPSFNESFGLVAMEAQAS 348 (438)
T ss_dssp CTTCSEEEEE-ECCBC------CHHHHHHHHTTCTTTEEEECCCCHHHHHHHHHHCSE--EEECCSCCSSCHHHHHHHHT
T ss_pred CCCcceEEEE-EeCCCCCCcHHHHHHHHHHHcCCCCcEEEcCCCChHHHHHHHHhCCE--EEECccccCCchHHHHHHHc
Confidence 234333 3431 11122333322 25789999999864 58888998 7754 334689999999
Q ss_pred CCCEecccccccchhhHHHHHHhhcceEEeccCCCCCCcccccCCcccchhHHHHHHHHHhcCChhhHHHHHHHHHHHHH
Q 039701 370 GLPMVTWPFFADQFCNEKLVVQVLRIGVTIGAERPPSLADEERNGVPVKKEDVKKAINMLMDEGEERDERRRRAREYGET 449 (476)
Q Consensus 370 GvP~l~~P~~~DQ~~~a~~v~e~~g~G~~l~~~~~~~~~~~~~~~~~~t~~~l~~~i~~ll~~~~~~~~~r~~a~~l~~~ 449 (476)
|+|+|+.+. ......+ +.-+.|...+.. +.+++.++|.++++|++..+++.+++++....
T Consensus 349 G~PvI~~~~----~~~~e~i-~~~~~g~~~~~~---------------d~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~ 408 (438)
T 3c48_A 349 GTPVIAARV----GGLPIAV-AEGETGLLVDGH---------------SPHAWADALATLLDDDETRIRMGEDAVEHART 408 (438)
T ss_dssp TCCEEEESC----TTHHHHS-CBTTTEEEESSC---------------CHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH
T ss_pred CCCEEecCC----CChhHHh-hCCCcEEECCCC---------------CHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHh
Confidence 999999654 4455556 465677766443 78999999999999887777888888887766
Q ss_pred HHHHHhhCCChHHHHHHHHHHHHHh
Q 039701 450 AKTAIEEGGSSYLNIKLLIKDILQQ 474 (476)
Q Consensus 450 ~~~~~~~gg~~~~~~~~~~~~i~~~ 474 (476)
+.-. ...+.+++.++++
T Consensus 409 ~s~~--------~~~~~~~~~~~~~ 425 (438)
T 3c48_A 409 FSWA--------ATAAQLSSLYNDA 425 (438)
T ss_dssp HHHH--------HHHHHHHHHHHHH
T ss_pred CCHH--------HHHHHHHHHHHHH
Confidence 4433 4455555555443
No 27
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=99.41 E-value=2e-12 Score=126.49 Aligned_cols=136 Identities=16% Similarity=0.184 Sum_probs=86.5
Q ss_pred CceEEEecCCcccCCHHHHHHHHHHHHhC-----CCCeEEEEcCCCCCchhHHHHhc-CCCeEeeccccH---HHhhhCC
Q 039701 279 GSAVYVCLGSLCDCSTRQLIELGLGLEAT-----KKPFIWVIRPGDQAFEKFEERIE-GRGLLIRGWAPQ---VVILSHP 349 (476)
Q Consensus 279 ~~vv~vs~GS~~~~~~~~~~~i~~a~~~~-----~~~~i~~~~~~~~~~~~~~~~~~-~~nv~~~~~vpq---~~ll~~~ 349 (476)
+++|+++.|...... .+..+++|++.. +.++++..+.+....+.+.+... .++|.+.+++++ ..+|..+
T Consensus 198 ~~~vl~~~gr~~~~k--~~~~ll~a~~~l~~~~~~~~lv~~~g~~~~~~~~l~~~~~~~~~v~~~g~~g~~~~~~~~~~a 275 (376)
T 1v4v_A 198 GPYVTVTMHRRENWP--LLSDLAQALKRVAEAFPHLTFVYPVHLNPVVREAVFPVLKGVRNFVLLDPLEYGSMAALMRAS 275 (376)
T ss_dssp SCEEEECCCCGGGGG--GHHHHHHHHHHHHHHCTTSEEEEECCSCHHHHHHHHHHHTTCTTEEEECCCCHHHHHHHHHTE
T ss_pred CCEEEEEeCcccchH--HHHHHHHHHHHHHhhCCCeEEEEECCCCHHHHHHHHHHhccCCCEEEECCCCHHHHHHHHHhC
Confidence 346777777553221 455566766532 45555544433110122332222 358999865554 4799999
Q ss_pred CceeeecccChhhHHHHHHcCCCEecccccccchhhHHHHHHhhcceEEeccCCCCCCcccccCCcccchhHHHHHHHHH
Q 039701 350 AIGGFLTHCGWNSVLEAVSNGLPMVTWPFFADQFCNEKLVVQVLRIGVTIGAERPPSLADEERNGVPVKKEDVKKAINML 429 (476)
Q Consensus 350 ~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~~a~~v~e~~g~G~~l~~~~~~~~~~~~~~~~~~t~~~l~~~i~~l 429 (476)
++ +|+.+| |.+.||+++|+|+|+.+...+++.. + +.|.|..+ . .++++|.++|.++
T Consensus 276 d~--~v~~S~-g~~lEA~a~G~PvI~~~~~~~~~~~---~--~~g~g~lv--~--------------~d~~~la~~i~~l 331 (376)
T 1v4v_A 276 LL--LVTDSG-GLQEEGAALGVPVVVLRNVTERPEG---L--KAGILKLA--G--------------TDPEGVYRVVKGL 331 (376)
T ss_dssp EE--EEESCH-HHHHHHHHTTCCEEECSSSCSCHHH---H--HHTSEEEC--C--------------SCHHHHHHHHHHH
T ss_pred cE--EEECCc-CHHHHHHHcCCCEEeccCCCcchhh---h--cCCceEEC--C--------------CCHHHHHHHHHHH
Confidence 98 999884 4456999999999998876666652 3 55777655 2 3789999999999
Q ss_pred hcCChhhHHHH
Q 039701 430 MDEGEERDERR 440 (476)
Q Consensus 430 l~~~~~~~~~r 440 (476)
++|++..+++.
T Consensus 332 l~d~~~~~~~~ 342 (376)
T 1v4v_A 332 LENPEELSRMR 342 (376)
T ss_dssp HTCHHHHHHHH
T ss_pred HhChHhhhhhc
Confidence 99874333333
No 28
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=99.40 E-value=8.3e-11 Score=119.61 Aligned_cols=368 Identities=15% Similarity=0.091 Sum_probs=186.7
Q ss_pred CCCCCCCCcEEEEEcCC---------------CccChHHHHHHHHHHHHCCCeEEEEeCCcchhhhhhH---hhhcccCC
Q 039701 1 MASQAGSQLHFILFPFL---------------AQGHMIPMIDIARLLAQHGALVTIVTTPMNAARFQNV---IERGIQSG 62 (476)
Q Consensus 1 m~~~~~~~~~vl~~~~p---------------~~GHv~P~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~---~~~~~~~g 62 (476)
|..|.+ ++||++++.. ..|.-.....|++.|.++||+|++++........... .+.. ...
T Consensus 1 m~~m~~-~MkIl~i~~~~~P~~~~l~v~~~~~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~-~~~ 78 (499)
T 2r60_A 1 MVEMTR-IKHVAFLNPQGNFDPADSYWTEHPDFGGQLVYVKEVSLALAEMGVQVDIITRRIKDENWPEFSGEIDYY-QET 78 (499)
T ss_dssp -------CCEEEEECCSSCCCTTCTTTTSBTTBSHHHHHHHHHHHHHHHTTCEEEEEEECCCBTTBGGGCCSEEEC-TTC
T ss_pred Cccccc-cceEEEEecCCCccccccccCCCCCCCCeeehHHHHHHHHHhcCCeEEEEeCCCCcccccchhhhHHhc-cCC
Confidence 555555 7899999852 3567788899999999999999999864322111110 0000 001
Q ss_pred CceEEEEeeCCCcccCCCCCCCCCCCCCCcCcHHHHHHHHHHchHHHHHHHHhcCCCCeEEEecCCC--chhHHHHhHcC
Q 039701 63 LRIQVIEFYFPCQEVGLPEGCESWDKLPSMALLPKFFAAIEMLRLPLETLFKEIQPKPGCLISDVCL--PWTVSSACKFN 140 (476)
Q Consensus 63 ~~i~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~D~vI~D~~~--~~~~~~A~~~g 140 (476)
.+++++.++..... . .........+. .....+.+++++...+||+|.+.... ..+..+++.++
T Consensus 79 ~gv~v~~~~~~~~~------~-----~~~~~~~~~~~----~~~~~l~~~l~~~~~~~Divh~~~~~~~~~~~~~~~~~~ 143 (499)
T 2r60_A 79 NKVRIVRIPFGGDK------F-----LPKEELWPYLH----EYVNKIINFYREEGKFPQVVTTHYGDGGLAGVLLKNIKG 143 (499)
T ss_dssp SSEEEEEECCSCSS------C-----CCGGGCGGGHH----HHHHHHHHHHHHHTCCCSEEEEEHHHHHHHHHHHHHHHC
T ss_pred CCeEEEEecCCCcC------C-----cCHHHHHHHHH----HHHHHHHHHHHhcCCCCCEEEEcCCcchHHHHHHHHhcC
Confidence 25777776532110 0 00001111111 11223445555422489999987532 23456778899
Q ss_pred CCcEEEecchHHHHHHHhhhhccccCCCCCCCCcccccCCCCCcccccccccchhhhHHHhHHHHHHhhccccEEEecch
Q 039701 141 VPRIVFHGFSCFCLLCLHSLSVSKAHESVSSDSEYFLVPGLPDRVEITKAQLPEILKLKSFGEPILAAEMASYGVIVNSF 220 (476)
Q Consensus 141 iP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pg~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 220 (476)
+|+|............. ....+.+. ..+...+++...........+.++.++..+-
T Consensus 144 ~p~v~~~H~~~~~~~~~------------------~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~ 199 (499)
T 2r60_A 144 LPFTFTGHSLGAQKMEK------------------LNVNTSNF------KEMDERFKFHRRIIAERLTMSYADKIIVSTS 199 (499)
T ss_dssp CCEEEECSSCHHHHHHT------------------TCCCSTTS------HHHHHHHCHHHHHHHHHHHHHHCSEEEESSH
T ss_pred CcEEEEccCcccccchh------------------hccCCCCc------chhhhhHHHHHHHHHHHHHHhcCCEEEECCH
Confidence 99987555432221100 00000000 0000000000000111223456777777663
Q ss_pred hhcCHHHHHHHHhc--cC--------CceEEeCcccCCCCCcccccccCCCCCCCc----cccccccc-----CCCCCce
Q 039701 221 EELEPAYVEEYKNA--RD--------GKVWCVGPVSLCNKEDMDKLERGDKTSNDG----SGCLKWLD-----SWQPGSA 281 (476)
Q Consensus 221 ~~l~~~~~~~~~~~--~~--------~~v~~vGpl~~~~~~~~~~~~~~~~~~~~~----~~l~~~l~-----~~~~~~v 281 (476)
... +.+... ++ .++..|..-+....-.. ... ..+.+-+. ...++ .
T Consensus 200 ~~~-----~~~~~~~~~g~~~~~~~~~ki~vi~ngvd~~~~~~----------~~~~~~~~~~r~~~~~~~~~~~~~~-~ 263 (499)
T 2r60_A 200 QER-----FGQYSHDLYRGAVNVEDDDKFSVIPPGVNTRVFDG----------EYGDKIKAKITKYLERDLGSERMEL-P 263 (499)
T ss_dssp HHH-----HHTTTSGGGTTTCCTTCGGGEEECCCCBCTTTSSS----------CCCHHHHHHHHHHHHHHSCGGGTTS-C
T ss_pred HHH-----HHHHhhhcccccccccCCCCeEEECCCcChhhcCc----------cchhhhHHHHHHHhcccccccCCCC-c
Confidence 311 111121 11 24444442221110000 000 11222221 11122 3
Q ss_pred EEEecCCcccCCHHHHHHHHHHHHhCC-----CCeEEEEcCCCCC--------------chhHHHHh----cCCCeEeec
Q 039701 282 VYVCLGSLCDCSTRQLIELGLGLEATK-----KPFIWVIRPGDQA--------------FEKFEERI----EGRGLLIRG 338 (476)
Q Consensus 282 v~vs~GS~~~~~~~~~~~i~~a~~~~~-----~~~i~~~~~~~~~--------------~~~~~~~~----~~~nv~~~~ 338 (476)
+++..|... ..+.+..+++|++... ...++.++..... .+.+.+.+ ..++|.+.+
T Consensus 264 ~i~~vGrl~--~~Kg~~~li~a~~~l~~~~~~~~~l~i~G~~~~~~~~y~~l~~~~~~y~~~l~~~~~~~~l~~~V~~~G 341 (499)
T 2r60_A 264 AIIASSRLD--QKKNHYGLVEAYVQNKELQDKANLVLTLRGIENPFEDYSRAGQEEKEILGKIIELIDNNDCRGKVSMFP 341 (499)
T ss_dssp EEEECSCCC--GGGCHHHHHHHHHTCHHHHHHCEEEEEESSCSBTTTBCTTSCHHHHHHHHHHHHHHHHTTCBTTEEEEE
T ss_pred EEEEeecCc--cccCHHHHHHHHHHHHHhCCCceEEEEECCCCCcccccccccccchHHHHHHHHHHHhcCCCceEEECC
Confidence 556677764 3455667788887653 2235555552110 11222222 257899999
Q ss_pred cccHH---HhhhCC----Cceeeecc---cC-hhhHHHHHHcCCCEecccccccchhhHHHHHHhhcceEEeccCCCCCC
Q 039701 339 WAPQV---VILSHP----AIGGFLTH---CG-WNSVLEAVSNGLPMVTWPFFADQFCNEKLVVQVLRIGVTIGAERPPSL 407 (476)
Q Consensus 339 ~vpq~---~ll~~~----~~~~~I~H---gG-~~s~~eal~~GvP~l~~P~~~DQ~~~a~~v~e~~g~G~~l~~~~~~~~ 407 (476)
++|+. .++..+ ++ +|.- -| -+++.||+++|+|+|+... ......+ +.-+.|..++..
T Consensus 342 ~v~~~~~~~~~~~a~~~~dv--~v~pS~~Eg~~~~~lEAma~G~PvI~s~~----~g~~e~v-~~~~~g~l~~~~----- 409 (499)
T 2r60_A 342 LNSQQELAGCYAYLASKGSV--FALTSFYEPFGLAPVEAMASGLPAVVTRN----GGPAEIL-DGGKYGVLVDPE----- 409 (499)
T ss_dssp CCSHHHHHHHHHHHHHTTCE--EEECCSCBCCCSHHHHHHHTTCCEEEESS----BHHHHHT-GGGTSSEEECTT-----
T ss_pred CCCHHHHHHHHHhcCcCCCE--EEECcccCCCCcHHHHHHHcCCCEEEecC----CCHHHHh-cCCceEEEeCCC-----
Confidence 99755 478888 88 7632 23 3689999999999999754 3455555 355567777544
Q ss_pred cccccCCcccchhHHHHHHHHHhcCChhhHHHHHHHHHHHHH
Q 039701 408 ADEERNGVPVKKEDVKKAINMLMDEGEERDERRRRAREYGET 449 (476)
Q Consensus 408 ~~~~~~~~~~t~~~l~~~i~~ll~~~~~~~~~r~~a~~l~~~ 449 (476)
+.+++.++|.++++|++..+++.+++++....
T Consensus 410 ----------d~~~la~~i~~ll~~~~~~~~~~~~a~~~~~~ 441 (499)
T 2r60_A 410 ----------DPEDIARGLLKAFESEETWSAYQEKGKQRVEE 441 (499)
T ss_dssp ----------CHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHH
T ss_pred ----------CHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHH
Confidence 78999999999999886666777776665544
No 29
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=99.38 E-value=1.2e-10 Score=114.80 Aligned_cols=340 Identities=11% Similarity=0.066 Sum_probs=183.0
Q ss_pred CcEEEEEcCC---C-ccChHHHHHHHHHHHHCCCeEEEEeCCcchhhhhhHhhhcccCCCceEEEEeeCCCcccCCCCCC
Q 039701 8 QLHFILFPFL---A-QGHMIPMIDIARLLAQHGALVTIVTTPMNAARFQNVIERGIQSGLRIQVIEFYFPCQEVGLPEGC 83 (476)
Q Consensus 8 ~~~vl~~~~p---~-~GHv~P~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~g~~i~~~~i~~~~~~~~~~~~~ 83 (476)
++||+++... . .|.-.-+..|++.|.++||+|++++............. ..+ ++..++.. .
T Consensus 20 ~MkIl~i~~~~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~---~~~---~~~~~~~~-------~-- 84 (406)
T 2gek_A 20 HMRIGMVCPYSFDVPGGVQSHVLQLAEVLRDAGHEVSVLAPASPHVKLPDYVV---SGG---KAVPIPYN-------G-- 84 (406)
T ss_dssp -CEEEEECSSCTTSCCHHHHHHHHHHHHHHHTTCEEEEEESCCTTSCCCTTEE---ECC---CCC---------------
T ss_pred cceEEEEeccCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCccccCCcccc---cCC---cEEecccc-------C--
Confidence 6899999842 2 56668899999999999999999987643221111100 000 11111100 0
Q ss_pred CCCCCCCCcCcHHHHHHHHHHchHHHHHHHHhcCCCCeEEEecCCC--chhHHHHhHcCCCcEEEecchHHHHHHHhhhh
Q 039701 84 ESWDKLPSMALLPKFFAAIEMLRLPLETLFKEIQPKPGCLISDVCL--PWTVSSACKFNVPRIVFHGFSCFCLLCLHSLS 161 (476)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~D~vI~D~~~--~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~ 161 (476)
....+ .........+.+++++ .+||+|++.... ..+..+++.+++|++..........
T Consensus 85 ----------~~~~~-~~~~~~~~~l~~~l~~--~~~Dii~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~------- 144 (406)
T 2gek_A 85 ----------SVARL-RFGPATHRKVKKWIAE--GDFDVLHIHEPNAPSLSMLALQAAEGPIVATFHTSTTKS------- 144 (406)
T ss_dssp -----------------CCHHHHHHHHHHHHH--HCCSEEEEECCCSSSHHHHHHHHEESSEEEEECCCCCSH-------
T ss_pred ----------Ccccc-cccHHHHHHHHHHHHh--cCCCEEEECCccchHHHHHHHHhcCCCEEEEEcCcchhh-------
Confidence 00000 0000122456667777 799999987743 2356677888999998544310000
Q ss_pred ccccCCCCCCCCcccccCCCCCcccccccccchhhh-HHHhHHHHHHhhccccEEEecchhhcCHHHHHHHHhccC-Cce
Q 039701 162 VSKAHESVSSDSEYFLVPGLPDRVEITKAQLPEILK-LKSFGEPILAAEMASYGVIVNSFEELEPAYVEEYKNARD-GKV 239 (476)
Q Consensus 162 ~~~~~~~~~~~~~~~~~Pg~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~-~~v 239 (476)
.... +..+.. .....++.++..+-... +.+...++ .++
T Consensus 145 --------------------------------~~~~~~~~~~~---~~~~~~d~ii~~s~~~~-----~~~~~~~~~~~~ 184 (406)
T 2gek_A 145 --------------------------------LTLSVFQGILR---PYHEKIIGRIAVSDLAR-----RWQMEALGSDAV 184 (406)
T ss_dssp --------------------------------HHHHHHHSTTH---HHHTTCSEEEESSHHHH-----HHHHHHHSSCEE
T ss_pred --------------------------------hhHHHHHHHHH---HHHhhCCEEEECCHHHH-----HHHHHhcCCCcE
Confidence 0000 111111 23456677776653221 12222222 333
Q ss_pred EEeCcccCCCCCcccccccCCCCCCCcccccccccCCCCCceEEEecCCc-ccCCHHHHHHHHHHHHhC-----CCCeEE
Q 039701 240 WCVGPVSLCNKEDMDKLERGDKTSNDGSGCLKWLDSWQPGSAVYVCLGSL-CDCSTRQLIELGLGLEAT-----KKPFIW 313 (476)
Q Consensus 240 ~~vGpl~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~GS~-~~~~~~~~~~i~~a~~~~-----~~~~i~ 313 (476)
.+...+...... . ... ..-+.. ++ .+++..|+. .. .+.+..++++++.. +.++++
T Consensus 185 -vi~~~v~~~~~~------~------~~~-~~~~~~--~~-~~i~~~G~~~~~--~Kg~~~li~a~~~l~~~~~~~~l~i 245 (406)
T 2gek_A 185 -EIPNGVDVASFA------D------APL-LDGYPR--EG-RTVLFLGRYDEP--RKGMAVLLAALPKLVARFPDVEILI 245 (406)
T ss_dssp -ECCCCBCHHHHH------T------CCC-CTTCSC--SS-CEEEEESCTTSG--GGCHHHHHHHHHHHHTTSTTCEEEE
T ss_pred -EecCCCChhhcC------C------Cch-hhhccC--CC-eEEEEEeeeCcc--ccCHHHHHHHHHHHHHHCCCeEEEE
Confidence 444322110000 0 000 000000 12 355667776 33 23344445555432 444443
Q ss_pred EEcCCCCCchhHHHHhc--CCCeEeeccccHH---HhhhCCCceeeec----ccCh-hhHHHHHHcCCCEecccccccch
Q 039701 314 VIRPGDQAFEKFEERIE--GRGLLIRGWAPQV---VILSHPAIGGFLT----HCGW-NSVLEAVSNGLPMVTWPFFADQF 383 (476)
Q Consensus 314 ~~~~~~~~~~~~~~~~~--~~nv~~~~~vpq~---~ll~~~~~~~~I~----HgG~-~s~~eal~~GvP~l~~P~~~DQ~ 383 (476)
++.+.. +.+.+... .++|.+.+++++. .++..+++ +|. +.|. +++.||+++|+|+|+.+. .
T Consensus 246 -~G~~~~--~~l~~~~~~~~~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~~e~~~~~~~Ea~a~G~PvI~~~~----~ 316 (406)
T 2gek_A 246 -VGRGDE--DELREQAGDLAGHLRFLGQVDDATKASAMRSADV--YCAPHLGGESFGIVLVEAMAAGTAVVASDL----D 316 (406)
T ss_dssp -ESCSCH--HHHHHHTGGGGGGEEECCSCCHHHHHHHHHHSSE--EEECCCSCCSSCHHHHHHHHHTCEEEECCC----H
T ss_pred -EcCCcH--HHHHHHHHhccCcEEEEecCCHHHHHHHHHHCCE--EEecCCCCCCCchHHHHHHHcCCCEEEecC----C
Confidence 444331 33443332 5799999999975 68999999 663 3344 489999999999999765 4
Q ss_pred hhHHHHHHhhcceEEeccCCCCCCcccccCCcccchhHHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHHhhCCChHHH
Q 039701 384 CNEKLVVQVLRIGVTIGAERPPSLADEERNGVPVKKEDVKKAINMLMDEGEERDERRRRAREYGETAKTAIEEGGSSYLN 463 (476)
Q Consensus 384 ~~a~~v~e~~g~G~~l~~~~~~~~~~~~~~~~~~t~~~l~~~i~~ll~~~~~~~~~r~~a~~l~~~~~~~~~~gg~~~~~ 463 (476)
.....+ +.-+.|...+.. +.+++.++|.++++|++..+.+.+++++....+ +....
T Consensus 317 ~~~e~i-~~~~~g~~~~~~---------------d~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~--------s~~~~ 372 (406)
T 2gek_A 317 AFRRVL-ADGDAGRLVPVD---------------DADGMAAALIGILEDDQLRAGYVARASERVHRY--------DWSVV 372 (406)
T ss_dssp HHHHHH-TTTTSSEECCTT---------------CHHHHHHHHHHHHHCHHHHHHHHHHHHHHGGGG--------BHHHH
T ss_pred cHHHHh-cCCCceEEeCCC---------------CHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHhC--------CHHHH
Confidence 566666 466677766443 789999999999998765556666665554432 23355
Q ss_pred HHHHHHHHHHh
Q 039701 464 IKLLIKDILQQ 474 (476)
Q Consensus 464 ~~~~~~~i~~~ 474 (476)
.+.+.+.++++
T Consensus 373 ~~~~~~~~~~~ 383 (406)
T 2gek_A 373 SAQIMRVYETV 383 (406)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 66666666554
No 30
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=99.35 E-value=7e-10 Score=110.42 Aligned_cols=163 Identities=12% Similarity=0.059 Sum_probs=103.4
Q ss_pred eEEEecCCcc-c-CCHHHHHHHHHHHHh----CCCCeEEEEcCCCC-CchhHHHHh--cCCCeEeeccccHH---HhhhC
Q 039701 281 AVYVCLGSLC-D-CSTRQLIELGLGLEA----TKKPFIWVIRPGDQ-AFEKFEERI--EGRGLLIRGWAPQV---VILSH 348 (476)
Q Consensus 281 vv~vs~GS~~-~-~~~~~~~~i~~a~~~----~~~~~i~~~~~~~~-~~~~~~~~~--~~~nv~~~~~vpq~---~ll~~ 348 (476)
.+++..|+.. . ...+.+...+..+.. .+.++++. +.+.. ..+.+.+.. .++++.+.+|+++. .++..
T Consensus 252 ~~i~~~G~~~~~~Kg~~~li~a~~~l~~~~~~~~~~l~i~-G~g~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 330 (439)
T 3fro_A 252 VTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMRFIII-GKGDPELEGWARSLEEKHGNVKVITEMLSREFVRELYGS 330 (439)
T ss_dssp EEEEEECCSSCTTBCHHHHHHHHHHHHTSGGGGGEEEEEE-CCCCHHHHHHHHHHHHHCTTEEEECSCCCHHHHHHHHTT
T ss_pred cEEEEEcccccccccHHHHHHHHHHHHhcccCCCeEEEEE-cCCChhHHHHHHHHHhhcCCEEEEcCCCCHHHHHHHHHH
Confidence 5667788876 3 233434333333433 34444443 33321 002222221 23566778889975 47888
Q ss_pred CCceeeecc----cChhhHHHHHHcCCCEecccccccchhhHHHHHHhhcceEEeccCCCCCCcccccCCcccchhHHHH
Q 039701 349 PAIGGFLTH----CGWNSVLEAVSNGLPMVTWPFFADQFCNEKLVVQVLRIGVTIGAERPPSLADEERNGVPVKKEDVKK 424 (476)
Q Consensus 349 ~~~~~~I~H----gG~~s~~eal~~GvP~l~~P~~~DQ~~~a~~v~e~~g~G~~l~~~~~~~~~~~~~~~~~~t~~~l~~ 424 (476)
+++ +|.- |--+++.||+++|+|+|+... ......+ ..|.|..++.. +.+++.+
T Consensus 331 adv--~v~ps~~e~~~~~~~EAma~G~Pvi~s~~----~~~~e~~--~~~~g~~~~~~---------------d~~~la~ 387 (439)
T 3fro_A 331 VDF--VIIPSYFEPFGLVALEAMCLGAIPIASAV----GGLRDII--TNETGILVKAG---------------DPGELAN 387 (439)
T ss_dssp CSE--EEECBSCCSSCHHHHHHHHTTCEEEEESS----THHHHHC--CTTTCEEECTT---------------CHHHHHH
T ss_pred CCE--EEeCCCCCCccHHHHHHHHCCCCeEEcCC----CCcceeE--EcCceEEeCCC---------------CHHHHHH
Confidence 888 6632 334789999999999999643 4455555 23578777554 7899999
Q ss_pred HHHHHhc-CChhhHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHhc
Q 039701 425 AINMLMD-EGEERDERRRRAREYGETAKTAIEEGGSSYLNIKLLIKDILQQA 475 (476)
Q Consensus 425 ~i~~ll~-~~~~~~~~r~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~i~~~~ 475 (476)
+|.++++ |++..+.+.+++++..+.+. -....+++++.++++.
T Consensus 388 ~i~~ll~~~~~~~~~~~~~~~~~~~~~s--------~~~~~~~~~~~~~~~~ 431 (439)
T 3fro_A 388 AILKALELSRSDLSKFRENCKKRAMSFS--------WEKSAERYVKAYTGSI 431 (439)
T ss_dssp HHHHHHHHTTTTTHHHHHHHHHHHHTSC--------HHHHHHHHHHHHHTCS
T ss_pred HHHHHHhcCHHHHHHHHHHHHHHHhhCc--------HHHHHHHHHHHHHHHH
Confidence 9999999 88888888888887764433 3377777777776553
No 31
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=99.35 E-value=4.5e-12 Score=124.30 Aligned_cols=141 Identities=14% Similarity=0.136 Sum_probs=89.8
Q ss_pred CCceEEEecCCcccCCHHHHHHHHHHHHhC-----CCCeEEEEcCCCCCchhHHHHhc-CCCeEeeccccH---HHhhhC
Q 039701 278 PGSAVYVCLGSLCDCSTRQLIELGLGLEAT-----KKPFIWVIRPGDQAFEKFEERIE-GRGLLIRGWAPQ---VVILSH 348 (476)
Q Consensus 278 ~~~vv~vs~GS~~~~~~~~~~~i~~a~~~~-----~~~~i~~~~~~~~~~~~~~~~~~-~~nv~~~~~vpq---~~ll~~ 348 (476)
++++|+++.|...... +.+..+++|++.. +.++++..+.+....+.+.+... .++|.+.+++++ ..++..
T Consensus 204 ~~~~vl~~~gr~~~~~-kg~~~li~a~~~l~~~~~~~~l~i~~g~~~~~~~~l~~~~~~~~~v~~~g~~~~~~~~~~~~~ 282 (384)
T 1vgv_A 204 DKKMILVTGHRRESFG-RGFEEICHALADIATTHQDIQIVYPVHLNPNVREPVNRILGHVKNVILIDPQEYLPFVWLMNH 282 (384)
T ss_dssp TSEEEEEECCCBSSCC-HHHHHHHHHHHHHHHHCTTEEEEEECCBCHHHHHHHHHHHTTCTTEEEECCCCHHHHHHHHHH
T ss_pred CCCEEEEEeCCccccc-hHHHHHHHHHHHHHhhCCCeEEEEEcCCCHHHHHHHHHHhhcCCCEEEeCCCCHHHHHHHHHh
Confidence 3457778888765322 3455566666532 45555543322100122222222 368999766664 468999
Q ss_pred CCceeeecccChhhHHHHHHcCCCEecccccccchhhHHHHHHhhcceEEeccCCCCCCcccccCCcccchhHHHHHHHH
Q 039701 349 PAIGGFLTHCGWNSVLEAVSNGLPMVTWPFFADQFCNEKLVVQVLRIGVTIGAERPPSLADEERNGVPVKKEDVKKAINM 428 (476)
Q Consensus 349 ~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~~a~~v~e~~g~G~~l~~~~~~~~~~~~~~~~~~t~~~l~~~i~~ 428 (476)
+++ +|+.+| +.+.||+++|+|+|+.+...+.+. +. +.|.|..+ . . ++++|.++|.+
T Consensus 283 ad~--~v~~Sg-~~~lEA~a~G~PvI~~~~~~~~~e----~v-~~g~g~lv--~-------------~-d~~~la~~i~~ 338 (384)
T 1vgv_A 283 AWL--ILTDSG-GIQEEAPSLGKPVLVMRDTTERPE----AV-TAGTVRLV--G-------------T-DKQRIVEEVTR 338 (384)
T ss_dssp CSE--EEESSS-TGGGTGGGGTCCEEEESSCCSCHH----HH-HHTSEEEE--C-------------S-SHHHHHHHHHH
T ss_pred CcE--EEECCc-chHHHHHHcCCCEEEccCCCCcch----hh-hCCceEEe--C-------------C-CHHHHHHHHHH
Confidence 999 999885 348899999999999987444332 33 55777665 2 2 78999999999
Q ss_pred HhcCChhhHHHHHHH
Q 039701 429 LMDEGEERDERRRRA 443 (476)
Q Consensus 429 ll~~~~~~~~~r~~a 443 (476)
+++|++..+++.+++
T Consensus 339 ll~d~~~~~~~~~~~ 353 (384)
T 1vgv_A 339 LLKDENEYQAMSRAH 353 (384)
T ss_dssp HHHCHHHHHHHHSSC
T ss_pred HHhChHHHhhhhhcc
Confidence 999875555555444
No 32
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*
Probab=99.33 E-value=7.7e-10 Score=108.79 Aligned_cols=351 Identities=12% Similarity=0.059 Sum_probs=187.7
Q ss_pred CcEEEEEcCCCc-cChHHHHHHHHHHHHCCCeEEEEeCCcchhhhhhHhhhcccCCCceEEEEeeCCCcccCCCCCCCCC
Q 039701 8 QLHFILFPFLAQ-GHMIPMIDIARLLAQHGALVTIVTTPMNAARFQNVIERGIQSGLRIQVIEFYFPCQEVGLPEGCESW 86 (476)
Q Consensus 8 ~~~vl~~~~p~~-GHv~P~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~g~~i~~~~i~~~~~~~~~~~~~~~~ 86 (476)
++++....+|.. |.-.-...|++.|+++||+|++++...... ... ...++.+..++... .+.
T Consensus 15 ~~~~~~~~~p~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~-~~~-------~~~~i~~~~~~~~~----~~~----- 77 (394)
T 2jjm_A 15 KLKIGITCYPSVGGSGVVGTELGKQLAERGHEIHFITSGLPFR-LNK-------VYPNIYFHEVTVNQ----YSV----- 77 (394)
T ss_dssp CCEEEEECCC--CHHHHHHHHHHHHHHHTTCEEEEECSSCC-----C-------CCTTEEEECCCCC-------------
T ss_pred eeeeehhcCCCCCCHHHHHHHHHHHHHhCCCEEEEEeCCCCCc-ccc-------cCCceEEEeccccc----ccc-----
Confidence 678888888854 566777899999999999999998753211 110 11246665544221 000
Q ss_pred CCCCCcCcHHHHHHHHHHchHHHHHHHHhcCCCCeEEEecCCCc--hhHHHHhHc---CCCcEEEecchHHHHHHHhhhh
Q 039701 87 DKLPSMALLPKFFAAIEMLRLPLETLFKEIQPKPGCLISDVCLP--WTVSSACKF---NVPRIVFHGFSCFCLLCLHSLS 161 (476)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~D~vI~D~~~~--~~~~~A~~~---giP~v~~~~~~~~~~~~~~~~~ 161 (476)
... ... . . .....+.+++++ .+||+|++....+ ....++..+ ++|+|..........
T Consensus 78 --~~~-~~~-~-~----~~~~~l~~~l~~--~~~Dvv~~~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~------- 139 (394)
T 2jjm_A 78 --FQY-PPY-D-L----ALASKMAEVAQR--ENLDILHVHYAIPHAICAYLAKQMIGERIKIVTTLHGTDITV------- 139 (394)
T ss_dssp --CCS-CCH-H-H----HHHHHHHHHHHH--HTCSEEEECSSTTHHHHHHHHHHHTTTCSEEEEECCHHHHHT-------
T ss_pred --ccc-ccc-c-H----HHHHHHHHHHHH--cCCCEEEEcchhHHHHHHHHHHHhhcCCCCEEEEEecCcccc-------
Confidence 000 001 0 1 122345666777 7999999875432 233444443 589887544421110
Q ss_pred ccccCCCCCCCCcccccCCCCCcccccccccchhhhHHHhHHHHHHhhccccEEEecchhhcCHHHHHHHHhcc--CCce
Q 039701 162 VSKAHESVSSDSEYFLVPGLPDRVEITKAQLPEILKLKSFGEPILAAEMASYGVIVNSFEELEPAYVEEYKNAR--DGKV 239 (476)
Q Consensus 162 ~~~~~~~~~~~~~~~~~Pg~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~--~~~v 239 (476)
.+... . +..+ .......++.++..+-.. .+.+...+ +.++
T Consensus 140 -----------------~~~~~--------~-----~~~~---~~~~~~~ad~ii~~s~~~-----~~~~~~~~~~~~~~ 181 (394)
T 2jjm_A 140 -----------------LGSDP--------S-----LNNL---IRFGIEQSDVVTAVSHSL-----INETHELVKPNKDI 181 (394)
T ss_dssp -----------------TTTCT--------T-----THHH---HHHHHHHSSEEEESCHHH-----HHHHHHHTCCSSCE
T ss_pred -----------------cCCCH--------H-----HHHH---HHHHHhhCCEEEECCHHH-----HHHHHHhhCCcccE
Confidence 00000 0 1111 111234567777665322 11222222 2456
Q ss_pred EEeCcccCCCCCcccccccCCCCCCCcccccccccCCCCCceEEEecCCcccCCHHHHHHHHHHHHh----CCCCeEEEE
Q 039701 240 WCVGPVSLCNKEDMDKLERGDKTSNDGSGCLKWLDSWQPGSAVYVCLGSLCDCSTRQLIELGLGLEA----TKKPFIWVI 315 (476)
Q Consensus 240 ~~vGpl~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~GS~~~~~~~~~~~i~~a~~~----~~~~~i~~~ 315 (476)
..+..-+....... ....++.+-+.-.++ ..+++..|+... .+.+..+++|++. .+.+++ .+
T Consensus 182 ~vi~ngv~~~~~~~----------~~~~~~~~~~~~~~~-~~~i~~~G~~~~--~Kg~~~li~a~~~l~~~~~~~l~-i~ 247 (394)
T 2jjm_A 182 QTVYNFIDERVYFK----------RDMTQLKKEYGISES-EKILIHISNFRK--VKRVQDVVQAFAKIVTEVDAKLL-LV 247 (394)
T ss_dssp EECCCCCCTTTCCC----------CCCHHHHHHTTCC----CEEEEECCCCG--GGTHHHHHHHHHHHHHSSCCEEE-EE
T ss_pred EEecCCccHHhcCC----------cchHHHHHHcCCCCC-CeEEEEeecccc--ccCHHHHHHHHHHHHhhCCCEEE-EE
Confidence 66654332211000 001222222221122 235556677653 2344445555543 244444 34
Q ss_pred cCCCCCchhHHHHhc----CCCeEeeccccH-HHhhhCCCceeee----cccChhhHHHHHHcCCCEecccccccchhhH
Q 039701 316 RPGDQAFEKFEERIE----GRGLLIRGWAPQ-VVILSHPAIGGFL----THCGWNSVLEAVSNGLPMVTWPFFADQFCNE 386 (476)
Q Consensus 316 ~~~~~~~~~~~~~~~----~~nv~~~~~vpq-~~ll~~~~~~~~I----~HgG~~s~~eal~~GvP~l~~P~~~DQ~~~a 386 (476)
+.+.. .+.+.+.+. .++|.+.++..+ ..++..+++ +| .-|..+++.||+++|+|+|+.+.. ...
T Consensus 248 G~g~~-~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~~adv--~v~ps~~e~~~~~~~EAma~G~PvI~~~~~----~~~ 320 (394)
T 2jjm_A 248 GDGPE-FCTILQLVKNLHIEDRVLFLGKQDNVAELLAMSDL--MLLLSEKESFGLVLLEAMACGVPCIGTRVG----GIP 320 (394)
T ss_dssp CCCTT-HHHHHHHHHTTTCGGGBCCCBSCSCTHHHHHTCSE--EEECCSCCSCCHHHHHHHHTTCCEEEECCT----TST
T ss_pred CCchH-HHHHHHHHHHcCCCCeEEEeCchhhHHHHHHhCCE--EEeccccCCCchHHHHHHhcCCCEEEecCC----ChH
Confidence 43322 233333322 468888887654 469999999 77 556667999999999999997653 333
Q ss_pred HHHHHhhcceEEeccCCCCCCcccccCCcccchhHHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHHhhCCChHHHHHH
Q 039701 387 KLVVQVLRIGVTIGAERPPSLADEERNGVPVKKEDVKKAINMLMDEGEERDERRRRAREYGETAKTAIEEGGSSYLNIKL 466 (476)
Q Consensus 387 ~~v~e~~g~G~~l~~~~~~~~~~~~~~~~~~t~~~l~~~i~~ll~~~~~~~~~r~~a~~l~~~~~~~~~~gg~~~~~~~~ 466 (476)
..+ +.-+.|...+.. +.+++.++|.++++|++..+++.+++++...+ .-+..+..+.
T Consensus 321 e~v-~~~~~g~~~~~~---------------d~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~-------~~s~~~~~~~ 377 (394)
T 2jjm_A 321 EVI-QHGDTGYLCEVG---------------DTTGVADQAIQLLKDEELHRNMGERARESVYE-------QFRSEKIVSQ 377 (394)
T ss_dssp TTC-CBTTTEEEECTT---------------CHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH-------HSCHHHHHHH
T ss_pred HHh-hcCCceEEeCCC---------------CHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHH-------hCCHHHHHHH
Confidence 444 355567766443 78999999999999886666777777666522 2333366666
Q ss_pred HHHHHHHhc
Q 039701 467 LIKDILQQA 475 (476)
Q Consensus 467 ~~~~i~~~~ 475 (476)
+++.++++.
T Consensus 378 ~~~~~~~~~ 386 (394)
T 2jjm_A 378 YETIYYDVL 386 (394)
T ss_dssp HHHHHHHTC
T ss_pred HHHHHHHHH
Confidence 666666543
No 33
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=99.24 E-value=2.7e-11 Score=119.21 Aligned_cols=331 Identities=11% Similarity=0.062 Sum_probs=171.1
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHHC-CCeEEEEeCCcchhhhhhHhhhcccCCCceEE-EEeeCCCcccCCCCCCCCC
Q 039701 9 LHFILFPFLAQGHMIPMIDIARLLAQH-GALVTIVTTPMNAARFQNVIERGIQSGLRIQV-IEFYFPCQEVGLPEGCESW 86 (476)
Q Consensus 9 ~~vl~~~~p~~GHv~P~l~La~~L~~r-GH~Vt~~~~~~~~~~~~~~~~~~~~~g~~i~~-~~i~~~~~~~~~~~~~~~~ 86 (476)
+||++++ ++.....=+..|.++|.++ |+++.++.+..-.+.....++. ++++. +. +.-..
T Consensus 26 ~ki~~v~-Gtr~~~~~~a~li~~l~~~~~~~~~~~~tG~h~~~~~~~~~~-----~~i~~~~~---------l~~~~--- 87 (396)
T 3dzc_A 26 KKVLIVF-GTRPEAIKMAPLVQQLCQDNRFVAKVCVTGQHREMLDQVLEL-----FSITPDFD---------LNIME--- 87 (396)
T ss_dssp EEEEEEE-CSHHHHHHHHHHHHHHHHCTTEEEEEEECCSSSHHHHHHHHH-----TTCCCSEE---------CCCCC---
T ss_pred CeEEEEE-eccHhHHHHHHHHHHHHhCCCCcEEEEEecccHHHHHHHHHh-----cCCCCcee---------eecCC---
Confidence 5787776 8888888899999999998 7888766553322222222211 12210 01 11000
Q ss_pred CCCCCcCcHHHHHHHHHHchHHHHHHHHhcCCCCeEEEecC--CC-chhHHHHhHcCCCcEEEecchHHHHHHHhhhhcc
Q 039701 87 DKLPSMALLPKFFAAIEMLRLPLETLFKEIQPKPGCLISDV--CL-PWTVSSACKFNVPRIVFHGFSCFCLLCLHSLSVS 163 (476)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~D~vI~D~--~~-~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~ 163 (476)
....... ........+.+++++ .+||+|++-. .. ..+..+|..+|||++.+...
T Consensus 88 ---~~~~~~~----~~~~~~~~l~~~l~~--~kPDvVi~~g~~~~~~~~~~aa~~~~IPv~h~~ag-------------- 144 (396)
T 3dzc_A 88 ---PGQTLNG----VTSKILLGMQQVLSS--EQPDVVLVHGDTATTFAASLAAYYQQIPVGHVEAG-------------- 144 (396)
T ss_dssp ---TTCCHHH----HHHHHHHHHHHHHHH--HCCSEEEEETTSHHHHHHHHHHHTTTCCEEEETCC--------------
T ss_pred ---CCCCHHH----HHHHHHHHHHHHHHh--cCCCEEEEECCchhHHHHHHHHHHhCCCEEEEECC--------------
Confidence 0001111 223345567778888 7999988633 33 34578999999998753211
Q ss_pred ccCCCCCCCCcccccCCCCCcccccc-cccchhhhHHHhHHHHHHhhccccEEEecchhhcCHHHHHHHH-hcc-CCceE
Q 039701 164 KAHESVSSDSEYFLVPGLPDRVEITK-AQLPEILKLKSFGEPILAAEMASYGVIVNSFEELEPAYVEEYK-NAR-DGKVW 240 (476)
Q Consensus 164 ~~~~~~~~~~~~~~~Pg~~~~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~-~~~-~~~v~ 240 (476)
+.+ +.+ ...+ .+...... ...++.++..+-. .-+.+. .-. +.++.
T Consensus 145 -----------------~rs---~~~~~~~~-----~~~~r~~~--~~~a~~~~~~se~-----~~~~l~~~G~~~~ki~ 192 (396)
T 3dzc_A 145 -----------------LRT---GNIYSPWP-----EEGNRKLT--AALTQYHFAPTDT-----SRANLLQENYNAENIF 192 (396)
T ss_dssp -----------------CCC---SCTTSSTT-----HHHHHHHH--HHTCSEEEESSHH-----HHHHHHHTTCCGGGEE
T ss_pred -----------------ccc---cccccCCc-----HHHHHHHH--HHhcCEEECCCHH-----HHHHHHHcCCCcCcEE
Confidence 000 000 0000 11111111 1234555655522 111221 112 24688
Q ss_pred EeC-cccCCCCCcccccccCCCCCCCcccccccccC-CCCCceEEEecCCcccCCHHHHHHHHHHHHh-----CCCCeEE
Q 039701 241 CVG-PVSLCNKEDMDKLERGDKTSNDGSGCLKWLDS-WQPGSAVYVCLGSLCDCSTRQLIELGLGLEA-----TKKPFIW 313 (476)
Q Consensus 241 ~vG-pl~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~~~~~vv~vs~GS~~~~~~~~~~~i~~a~~~-----~~~~~i~ 313 (476)
.+| |................ ...+++.+.++- .+++++|+++.+-..... +.+..+++|++. .+.++|+
T Consensus 193 vvGn~~~d~~~~~~~~~~~~~---~~~~~~r~~lg~l~~~~~~vlv~~hR~~~~~-~~~~~ll~A~~~l~~~~~~~~~v~ 268 (396)
T 3dzc_A 193 VTGNTVIDALLAVREKIHTDM---DLQATLESQFPMLDASKKLILVTGHRRESFG-GGFERICQALITTAEQHPECQILY 268 (396)
T ss_dssp ECCCHHHHHHHHHHHHHHHCH---HHHHHHHHTCTTCCTTSEEEEEECSCBCCCT-THHHHHHHHHHHHHHHCTTEEEEE
T ss_pred EECCcHHHHHHHhhhhcccch---hhHHHHHHHhCccCCCCCEEEEEECCcccch-hHHHHHHHHHHHHHHhCCCceEEE
Confidence 888 43321100000000000 000122233321 133457777653222222 235667777654 3456666
Q ss_pred EEcCCCCCchhHHHHh-cCCCeEeecccc---HHHhhhCCCceeeecccChhhHHHHHHcCCCEecccccccchhhHHHH
Q 039701 314 VIRPGDQAFEKFEERI-EGRGLLIRGWAP---QVVILSHPAIGGFLTHCGWNSVLEAVSNGLPMVTWPFFADQFCNEKLV 389 (476)
Q Consensus 314 ~~~~~~~~~~~~~~~~-~~~nv~~~~~vp---q~~ll~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~~a~~v 389 (476)
..+.+....+.+.+.. ..+++.+.++++ ...++..+++ +|+-.| |.+.||.++|+|+|+.....+++ .+
T Consensus 269 ~~g~~~~~~~~l~~~~~~~~~v~~~~~lg~~~~~~l~~~ad~--vv~~SG-g~~~EA~a~G~PvV~~~~~~~~~----e~ 341 (396)
T 3dzc_A 269 PVHLNPNVREPVNKLLKGVSNIVLIEPQQYLPFVYLMDRAHI--ILTDSG-GIQEEAPSLGKPVLVMRETTERP----EA 341 (396)
T ss_dssp ECCBCHHHHHHHHHHTTTCTTEEEECCCCHHHHHHHHHHCSE--EEESCS-GGGTTGGGGTCCEEECCSSCSCH----HH
T ss_pred EeCCChHHHHHHHHHHcCCCCEEEeCCCCHHHHHHHHHhcCE--EEECCc-cHHHHHHHcCCCEEEccCCCcch----HH
Confidence 5443211011222221 246898877774 4468999999 999987 66679999999999976555543 23
Q ss_pred HHhhcceEEeccCCCCCCcccccCCcccchhHHHHHHHHHhcCChhhHHHH
Q 039701 390 VQVLRIGVTIGAERPPSLADEERNGVPVKKEDVKKAINMLMDEGEERDERR 440 (476)
Q Consensus 390 ~e~~g~G~~l~~~~~~~~~~~~~~~~~~t~~~l~~~i~~ll~~~~~~~~~r 440 (476)
. +.|.+..+ . .++++|.++|.++++|++..++|+
T Consensus 342 v-~~G~~~lv--~--------------~d~~~l~~ai~~ll~d~~~~~~m~ 375 (396)
T 3dzc_A 342 V-AAGTVKLV--G--------------TNQQQICDALSLLLTDPQAYQAMS 375 (396)
T ss_dssp H-HHTSEEEC--T--------------TCHHHHHHHHHHHHHCHHHHHHHH
T ss_pred H-HcCceEEc--C--------------CCHHHHHHHHHHHHcCHHHHHHHh
Confidence 3 56776433 2 268999999999999874333333
No 34
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=99.22 E-value=7.1e-09 Score=100.87 Aligned_cols=145 Identities=16% Similarity=0.218 Sum_probs=101.3
Q ss_pred eEEEecCCcccCCHHHHHHHHHHHHhCCC----C-eEEEEcCCCCCchhHHHHh----cCCCeEeeccccH-HHhhhCCC
Q 039701 281 AVYVCLGSLCDCSTRQLIELGLGLEATKK----P-FIWVIRPGDQAFEKFEERI----EGRGLLIRGWAPQ-VVILSHPA 350 (476)
Q Consensus 281 vv~vs~GS~~~~~~~~~~~i~~a~~~~~~----~-~i~~~~~~~~~~~~~~~~~----~~~nv~~~~~vpq-~~ll~~~~ 350 (476)
.+++..|+... .+.+..+++|++.... . -++.++.+. .+.+.+.. ..++|.+.++..+ ..++..++
T Consensus 197 ~~i~~~G~~~~--~K~~~~li~a~~~l~~~~~~~~~l~i~G~g~--~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~ad 272 (374)
T 2iw1_A 197 NLLLQVGSDFG--RKGVDRSIEALASLPESLRHNTLLFVVGQDK--PRKFEALAEKLGVRSNVHFFSGRNDVSELMAAAD 272 (374)
T ss_dssp EEEEEECSCTT--TTTHHHHHHHHHTSCHHHHHTEEEEEESSSC--CHHHHHHHHHHTCGGGEEEESCCSCHHHHHHHCS
T ss_pred eEEEEeccchh--hcCHHHHHHHHHHhHhccCCceEEEEEcCCC--HHHHHHHHHHcCCCCcEEECCCcccHHHHHHhcC
Confidence 46667777643 3556667788876532 1 234444433 22333322 2578999998764 46999999
Q ss_pred ceeeec----ccChhhHHHHHHcCCCEecccccccchhhHHHHHHhhcceEEeccCCCCCCcccccCCcccchhHHHHHH
Q 039701 351 IGGFLT----HCGWNSVLEAVSNGLPMVTWPFFADQFCNEKLVVQVLRIGVTIGAERPPSLADEERNGVPVKKEDVKKAI 426 (476)
Q Consensus 351 ~~~~I~----HgG~~s~~eal~~GvP~l~~P~~~DQ~~~a~~v~e~~g~G~~l~~~~~~~~~~~~~~~~~~t~~~l~~~i 426 (476)
+ +|. -|..+++.||+++|+|+|+... ..+...+ +..+.|..++.. -+.+++.++|
T Consensus 273 ~--~v~ps~~e~~~~~~~Ea~a~G~Pvi~~~~----~~~~e~i-~~~~~g~~~~~~--------------~~~~~l~~~i 331 (374)
T 2iw1_A 273 L--LLHPAYQEAAGIVLLEAITAGLPVLTTAV----CGYAHYI-ADANCGTVIAEP--------------FSQEQLNEVL 331 (374)
T ss_dssp E--EEECCSCCSSCHHHHHHHHHTCCEEEETT----STTTHHH-HHHTCEEEECSS--------------CCHHHHHHHH
T ss_pred E--EEeccccCCcccHHHHHHHCCCCEEEecC----CCchhhh-ccCCceEEeCCC--------------CCHHHHHHHH
Confidence 8 775 4567889999999999999765 4556677 577888877522 4789999999
Q ss_pred HHHhcCChhhHHHHHHHHHHHHHH
Q 039701 427 NMLMDEGEERDERRRRAREYGETA 450 (476)
Q Consensus 427 ~~ll~~~~~~~~~r~~a~~l~~~~ 450 (476)
.++++|++..+.+.+++++..++.
T Consensus 332 ~~l~~~~~~~~~~~~~~~~~~~~~ 355 (374)
T 2iw1_A 332 RKALTQSPLRMAWAENARHYADTQ 355 (374)
T ss_dssp HHHHHCHHHHHHHHHHHHHHHHHS
T ss_pred HHHHcChHHHHHHHHHHHHHHHHh
Confidence 999998877777778877776653
No 35
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=99.21 E-value=3.1e-10 Score=111.76 Aligned_cols=347 Identities=12% Similarity=0.051 Sum_probs=179.8
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHHC--CCeEEEEeCCcchhhhhhHhhhcccCCCceEE-EEeeCCCcccCCCCCCC
Q 039701 8 QLHFILFPFLAQGHMIPMIDIARLLAQH--GALVTIVTTPMNAARFQNVIERGIQSGLRIQV-IEFYFPCQEVGLPEGCE 84 (476)
Q Consensus 8 ~~~vl~~~~p~~GHv~P~l~La~~L~~r--GH~Vt~~~~~~~~~~~~~~~~~~~~~g~~i~~-~~i~~~~~~~~~~~~~~ 84 (476)
++||++++ ++.....=+..|.++|.++ |+++.++.+..-.+.....++ .+++.. +. +.-...
T Consensus 27 ~~kI~~v~-Gtr~~~~~~a~li~~l~~~~~~~~~~~~~tG~h~~m~~~~~~-----~~~i~~~~~---------l~v~~~ 91 (403)
T 3ot5_A 27 KIKVMSIF-GTRPEAIKMAPLVLALEKEPETFESTVVITAQHREMLDQVLE-----IFDIKPDID---------LDIMKK 91 (403)
T ss_dssp CEEEEEEE-CSHHHHHHHHHHHHHHHTCTTTEEEEEEECC-----CHHHHH-----HTTCCCSEE---------CCCCC-
T ss_pred cceEEEEE-ecChhHHHHHHHHHHHHhCCCCCcEEEEEecCcHHHHHHHHH-----hcCCCCCcc---------cccCCC
Confidence 46888887 8887888889999999988 688776655422122222211 112210 11 110000
Q ss_pred CCCCCCCcCcHHHHHHHHHHchHHHHHHHHhcCCCCeEEEecC--CC-chhHHHHhHcCCCcEEEecchHHHHHHHhhhh
Q 039701 85 SWDKLPSMALLPKFFAAIEMLRLPLETLFKEIQPKPGCLISDV--CL-PWTVSSACKFNVPRIVFHGFSCFCLLCLHSLS 161 (476)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~D~vI~D~--~~-~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~ 161 (476)
..... .........+.+++++ .+||+|++-. .. .++..+|.++|||++.+...
T Consensus 92 ------~~~~~----~~~~~~~~~l~~~l~~--~kPD~Vi~~gd~~~~l~~~laA~~~~IPv~h~~ag------------ 147 (403)
T 3ot5_A 92 ------GQTLA----EITSRVMNGINEVIAA--ENPDIVLVHGDTTTSFAAGLATFYQQKMLGHVEAG------------ 147 (403)
T ss_dssp ------CCCHH----HHHHHHHHHHHHHHHH--HCCSEEEEETTCHHHHHHHHHHHHTTCEEEEESCC------------
T ss_pred ------CCCHH----HHHHHHHHHHHHHHHH--cCCCEEEEECCchhHHHHHHHHHHhCCCEEEEECC------------
Confidence 00111 2233345567777887 7999988633 22 34578999999998753211
Q ss_pred ccccCCCCCCCCcccccCCCCCccccccc-ccchhhhHHHhHHHHHHhhccccEEEecchhhcCHHHHHHHH-hcc-CCc
Q 039701 162 VSKAHESVSSDSEYFLVPGLPDRVEITKA-QLPEILKLKSFGEPILAAEMASYGVIVNSFEELEPAYVEEYK-NAR-DGK 238 (476)
Q Consensus 162 ~~~~~~~~~~~~~~~~~Pg~~~~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~-~~~-~~~ 238 (476)
..+ +... ..+ .+....... ..++.++..+-. ..+.+. .-. +.+
T Consensus 148 -------------------lrs---~~~~~~~p-----~~~~r~~~~--~~a~~~~~~se~-----~~~~l~~~Gi~~~~ 193 (403)
T 3ot5_A 148 -------------------LRT---WNKYSPFP-----EEMNRQLTG--VMADIHFSPTKQ-----AKENLLAEGKDPAT 193 (403)
T ss_dssp -------------------CCC---SCTTSSTT-----HHHHHHHHH--HHCSEEEESSHH-----HHHHHHHTTCCGGG
T ss_pred -------------------ccc---cccccCCc-----HHHHHHHHH--HhcCEEECCCHH-----HHHHHHHcCCCccc
Confidence 000 0000 001 111111111 124455555422 111221 112 256
Q ss_pred eEEeCc-ccCCCCCcccccccCCCCCCCcccccccccCCCCCceEEEecCCcccCCHHHHHHHHHHHHh-----CCCCeE
Q 039701 239 VWCVGP-VSLCNKEDMDKLERGDKTSNDGSGCLKWLDSWQPGSAVYVCLGSLCDCSTRQLIELGLGLEA-----TKKPFI 312 (476)
Q Consensus 239 v~~vGp-l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~GS~~~~~~~~~~~i~~a~~~-----~~~~~i 312 (476)
+..+|. .......... .. ...+..+.+ +++++++++.|...... +.+..+++|+.. .+.++|
T Consensus 194 i~vvGn~~~D~~~~~~~-----~~---~~~~~~~~l---~~~~~vlv~~~r~~~~~-~~l~~ll~a~~~l~~~~~~~~~v 261 (403)
T 3ot5_A 194 IFVTGNTAIDALKTTVQ-----KD---YHHPILENL---GDNRLILMTAHRRENLG-EPMQGMFEAVREIVESREDTELV 261 (403)
T ss_dssp EEECCCHHHHHHHHHSC-----TT---CCCHHHHSC---TTCEEEEECCCCHHHHT-THHHHHHHHHHHHHHHCTTEEEE
T ss_pred EEEeCCchHHHHHhhhh-----hh---cchHHHHhc---cCCCEEEEEeCcccccC-cHHHHHHHHHHHHHHhCCCceEE
Confidence 888884 3221100000 00 011222222 34457777765422211 224556666553 345666
Q ss_pred EEEcCCCCCchhHHHHh-cCCCeEeecccc---HHHhhhCCCceeeecccChhhHHHHHHcCCCEecccccccchhhHHH
Q 039701 313 WVIRPGDQAFEKFEERI-EGRGLLIRGWAP---QVVILSHPAIGGFLTHCGWNSVLEAVSNGLPMVTWPFFADQFCNEKL 388 (476)
Q Consensus 313 ~~~~~~~~~~~~~~~~~-~~~nv~~~~~vp---q~~ll~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~~a~~ 388 (476)
+..+.+....+.+.+.. ..+++.+.++++ ...++..+++ +|+-.|. .+.||.++|+|+|++|...+++.
T Consensus 262 ~~~~~~~~~~~~l~~~~~~~~~v~l~~~l~~~~~~~l~~~ad~--vv~~SGg-~~~EA~a~g~PvV~~~~~~~~~e---- 334 (403)
T 3ot5_A 262 YPMHLNPAVREKAMAILGGHERIHLIEPLDAIDFHNFLRKSYL--VFTDSGG-VQEEAPGMGVPVLVLRDTTERPE---- 334 (403)
T ss_dssp EECCSCHHHHHHHHHHHTTCTTEEEECCCCHHHHHHHHHHEEE--EEECCHH-HHHHGGGTTCCEEECCSSCSCHH----
T ss_pred EecCCCHHHHHHHHHHhCCCCCEEEeCCCCHHHHHHHHHhcCE--EEECCcc-HHHHHHHhCCCEEEecCCCcchh----
Confidence 66543311011222211 246899999886 3468888888 9988752 23699999999999976666654
Q ss_pred HHHhhcceEEeccCCCCCCcccccCCcccchhHHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHH
Q 039701 389 VVQVLRIGVTIGAERPPSLADEERNGVPVKKEDVKKAINMLMDEGEERDERRRRAREYGETAKTAIEEGGSSYLNIKLLI 468 (476)
Q Consensus 389 v~e~~g~G~~l~~~~~~~~~~~~~~~~~~t~~~l~~~i~~ll~~~~~~~~~r~~a~~l~~~~~~~~~~gg~~~~~~~~~~ 468 (476)
+. +.|.|..+ . .++++|.++|.++++|++..+++++++. . ..+|+++.+.++.+.
T Consensus 335 ~v-~~g~~~lv--~--------------~d~~~l~~ai~~ll~~~~~~~~m~~~~~-------~-~g~~~aa~rI~~~l~ 389 (403)
T 3ot5_A 335 GI-EAGTLKLI--G--------------TNKENLIKEALDLLDNKESHDKMAQAAN-------P-YGDGFAANRILAAIK 389 (403)
T ss_dssp HH-HHTSEEEC--C--------------SCHHHHHHHHHHHHHCHHHHHHHHHSCC-------T-TCCSCHHHHHHHHHH
T ss_pred he-eCCcEEEc--C--------------CCHHHHHHHHHHHHcCHHHHHHHHhhcC-------c-ccCCcHHHHHHHHHH
Confidence 33 56766554 2 3789999999999988743333332221 1 244666666666555
Q ss_pred HHH
Q 039701 469 KDI 471 (476)
Q Consensus 469 ~~i 471 (476)
+.+
T Consensus 390 ~~l 392 (403)
T 3ot5_A 390 SHF 392 (403)
T ss_dssp HHH
T ss_pred HHh
Confidence 544
No 36
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=99.16 E-value=3.4e-10 Score=110.40 Aligned_cols=327 Identities=11% Similarity=0.038 Sum_probs=167.9
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHHC-C-CeEEEEeCCcchhhhhhHhhhcccCCCceEE-EEeeCCCcccCCCCCCC
Q 039701 8 QLHFILFPFLAQGHMIPMIDIARLLAQH-G-ALVTIVTTPMNAARFQNVIERGIQSGLRIQV-IEFYFPCQEVGLPEGCE 84 (476)
Q Consensus 8 ~~~vl~~~~p~~GHv~P~l~La~~L~~r-G-H~Vt~~~~~~~~~~~~~~~~~~~~~g~~i~~-~~i~~~~~~~~~~~~~~ 84 (476)
++||++++ ++.++......++++|+++ | |+|.++++....+......... ++.. ..++ ...
T Consensus 8 ~mkIl~v~-~~~~~~~~~~~l~~~L~~~~~~~~v~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~---------~~~- 71 (375)
T 3beo_A 8 RLKVMTIF-GTRPEAIKMAPLVLELQKHPEKIESIVTVTAQHRQMLDQVLSIF-----GITPDFDLN---------IMK- 71 (375)
T ss_dssp CEEEEEEE-CSHHHHHHHHHHHHHHTTCTTTEEEEEEECCSSSHHHHHHHHHH-----TCCCSEECC---------CCC-
T ss_pred CceEEEEe-cCcHHHHHHHHHHHHHHhCCCCCCeEEEEcCCCHHHHHHHHHHc-----CCCCccccc---------cCC-
Confidence 68999997 5577888889999999987 5 8888777654433222221110 1211 1111 000
Q ss_pred CCCCCCCcCcHHHHHHHHHHchHHHHHHHHhcCCCCeEEEecCCC---chhHHHHhHcCCCcEEEecchHHHHHHHhhhh
Q 039701 85 SWDKLPSMALLPKFFAAIEMLRLPLETLFKEIQPKPGCLISDVCL---PWTVSSACKFNVPRIVFHGFSCFCLLCLHSLS 161 (476)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~D~vI~D~~~---~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~ 161 (476)
+..+...... .....+.+++++ .+||+|++.... ..+..+|+..++|++.+.... .
T Consensus 72 -----~~~~~~~~~~----~~~~~l~~~l~~--~~pDvv~~~~~~~~~~~~~~~~~~~~ip~v~~~~~~--~-------- 130 (375)
T 3beo_A 72 -----DRQTLIDITT----RGLEGLDKVMKE--AKPDIVLVHGDTTTTFIASLAAFYNQIPVGHVEAGL--R-------- 130 (375)
T ss_dssp -----TTCCHHHHHH----HHHHHHHHHHHH--HCCSEEEEETTSHHHHHHHHHHHHTTCCEEEESCCC--C--------
T ss_pred -----CcccHHHHHH----HHHHHHHHHHHH--hCCCEEEEeCCchHHHHHHHHHHHHCCCEEEEeccc--c--------
Confidence 0011111111 123346667777 799999985432 223467889999998632210 0
Q ss_pred ccccCCCCCCCCcccccCCCCCcccccccccchhhhHHHhHHHHHHhhccccEEEecchhhcCHHHHHHHHh-cc-CCce
Q 039701 162 VSKAHESVSSDSEYFLVPGLPDRVEITKAQLPEILKLKSFGEPILAAEMASYGVIVNSFEELEPAYVEEYKN-AR-DGKV 239 (476)
Q Consensus 162 ~~~~~~~~~~~~~~~~~Pg~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~-~~-~~~v 239 (476)
. .... ...+ ..+..... .+.++.++..+-..- +.+.. .. +.++
T Consensus 131 --------------~-~~~~--------~~~~-----~~~~~~~~--~~~~d~ii~~s~~~~-----~~~~~~g~~~~~i 175 (375)
T 3beo_A 131 --------------T-WDKY--------SPYP-----EEMNRQLT--GVMADLHFSPTAKSA-----TNLQKENKDESRI 175 (375)
T ss_dssp --------------C-SCTT--------SSTT-----HHHHHHHH--HHHCSEEEESSHHHH-----HHHHHTTCCGGGE
T ss_pred --------------c-cccc--------CCCh-----hHhhhhHH--hhhhheeeCCCHHHH-----HHHHHcCCCcccE
Confidence 0 0000 0000 01111111 122556665553211 11211 11 1356
Q ss_pred EEeCcc-cCCCCCcccccccCCCCCCCcccccccccCCCCCceEEEecCCcccCCHHHHHHHHHHHHhC-----CCCeEE
Q 039701 240 WCVGPV-SLCNKEDMDKLERGDKTSNDGSGCLKWLDSWQPGSAVYVCLGSLCDCSTRQLIELGLGLEAT-----KKPFIW 313 (476)
Q Consensus 240 ~~vGpl-~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~GS~~~~~~~~~~~i~~a~~~~-----~~~~i~ 313 (476)
..+|.. +...... ... ....++.+-+ +++++++++.|...... +.+..+++|++.. +.++++
T Consensus 176 ~vi~n~~~d~~~~~------~~~--~~~~~~~~~~---~~~~~vl~~~gr~~~~~-K~~~~li~a~~~l~~~~~~~~~i~ 243 (375)
T 3beo_A 176 FITGNTAIDALKTT------VKE--TYSHPVLEKL---GNNRLVLMTAHRRENLG-EPMRNMFRAIKRLVDKHEDVQVVY 243 (375)
T ss_dssp EECCCHHHHHHHHH------CCS--SCCCHHHHTT---TTSEEEEEECCCGGGTT-HHHHHHHHHHHHHHHHCTTEEEEE
T ss_pred EEECChhHhhhhhh------hhh--hhhHHHHHhc---cCCCeEEEEecccccch-hHHHHHHHHHHHHHhhCCCeEEEE
Confidence 667633 2110000 000 0011222212 23456777777654322 4456677776532 445444
Q ss_pred EEcCCCC-CchhHHHHhc-CCCeEeeccccH---HHhhhCCCceeeecccChhhHHHHHHcCCCEecccccccchhhHHH
Q 039701 314 VIRPGDQ-AFEKFEERIE-GRGLLIRGWAPQ---VVILSHPAIGGFLTHCGWNSVLEAVSNGLPMVTWPFFADQFCNEKL 388 (476)
Q Consensus 314 ~~~~~~~-~~~~~~~~~~-~~nv~~~~~vpq---~~ll~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~~a~~ 388 (476)
. .+... ..+.+.+... .++|.+.+++++ ..++..+++ +|+..| +.+.||+++|+|+|+.......+ .
T Consensus 244 ~-~g~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~--~v~~sg-~~~lEA~a~G~Pvi~~~~~~~~~----e 315 (375)
T 3beo_A 244 P-VHMNPVVRETANDILGDYGRIHLIEPLDVIDFHNVAARSYL--MLTDSG-GVQEEAPSLGVPVLVLRDTTERP----E 315 (375)
T ss_dssp E-CCSCHHHHHHHHHHHTTCTTEEEECCCCHHHHHHHHHTCSE--EEECCH-HHHHHHHHHTCCEEECSSCCSCH----H
T ss_pred e-CCCCHHHHHHHHHHhhccCCEEEeCCCCHHHHHHHHHhCcE--EEECCC-ChHHHHHhcCCCEEEecCCCCCc----e
Confidence 2 22110 0111222211 368999777764 468889999 998874 45889999999999985433332 2
Q ss_pred HHHhhcceEEeccCCCCCCcccccCCcccchhHHHHHHHHHhcCChhhHHHHHHH
Q 039701 389 VVQVLRIGVTIGAERPPSLADEERNGVPVKKEDVKKAINMLMDEGEERDERRRRA 443 (476)
Q Consensus 389 v~e~~g~G~~l~~~~~~~~~~~~~~~~~~t~~~l~~~i~~ll~~~~~~~~~r~~a 443 (476)
+. +.|.|..+ . .++++|.++|.++++|++..+++.+++
T Consensus 316 ~v-~~g~g~~v--~--------------~d~~~la~~i~~ll~~~~~~~~~~~~~ 353 (375)
T 3beo_A 316 GI-EAGTLKLA--G--------------TDEETIFSLADELLSDKEAHDKMSKAS 353 (375)
T ss_dssp HH-HTTSEEEC--C--------------SCHHHHHHHHHHHHHCHHHHHHHCCCC
T ss_pred ee-cCCceEEc--C--------------CCHHHHHHHHHHHHhChHhHhhhhhcC
Confidence 33 55777655 2 277999999999999874444444443
No 37
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*
Probab=99.13 E-value=1.6e-09 Score=107.29 Aligned_cols=162 Identities=10% Similarity=0.016 Sum_probs=98.9
Q ss_pred eEEEecCCcccCCHHHHHHHHHHHHh-----CCCCeEEEEcCCCCCc---hhHHH---Hh-cCCCeEeecccc------H
Q 039701 281 AVYVCLGSLCDCSTRQLIELGLGLEA-----TKKPFIWVIRPGDQAF---EKFEE---RI-EGRGLLIRGWAP------Q 342 (476)
Q Consensus 281 vv~vs~GS~~~~~~~~~~~i~~a~~~-----~~~~~i~~~~~~~~~~---~~~~~---~~-~~~nv~~~~~vp------q 342 (476)
.+++..|..... +.+..+++|++. .+.++++.-.+....+ +.+.+ .. ..++|.+.+|++ -
T Consensus 232 ~~i~~vGrl~~~--Kg~~~li~a~~~l~~~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~~~~~~V~~~G~~~~~~~~~~ 309 (416)
T 2x6q_A 232 PIITQVSRFDPW--KGIFDVIEIYRKVKEKIPGVQLLLVGVMAHDDPEGWIYFEKTLRKIGEDYDVKVLTNLIGVHAREV 309 (416)
T ss_dssp CEEEEECCCCTT--SCHHHHHHHHHHHHHHCTTCEEEEEECCCTTCHHHHHHHHHHHHHHTTCTTEEEEEGGGTCCHHHH
T ss_pred cEEEEEeccccc--cCHHHHHHHHHHHHHhCCCeEEEEEecCcccchhHHHHHHHHHHHhCCCCcEEEecccCCCCHHHH
Confidence 355566776532 233444444443 2566666554432101 11111 11 247999999876 2
Q ss_pred HHhhhCCCceeeeccc----ChhhHHHHHHcCCCEecccccccchhhHHHHHHhhcceEEeccCCCCCCcccccCCcccc
Q 039701 343 VVILSHPAIGGFLTHC----GWNSVLEAVSNGLPMVTWPFFADQFCNEKLVVQVLRIGVTIGAERPPSLADEERNGVPVK 418 (476)
Q Consensus 343 ~~ll~~~~~~~~I~Hg----G~~s~~eal~~GvP~l~~P~~~DQ~~~a~~v~e~~g~G~~l~~~~~~~~~~~~~~~~~~t 418 (476)
..++..+++ +|.-. .-+++.||+++|+|+|+.+. ..+...+ +.-+.|...+ +
T Consensus 310 ~~~~~~ad~--~v~ps~~E~~~~~~lEAma~G~PvI~~~~----~g~~e~i-~~~~~g~l~~-----------------d 365 (416)
T 2x6q_A 310 NAFQRASDV--ILQMSIREGFGLTVTEAMWKGKPVIGRAV----GGIKFQI-VDGETGFLVR-----------------D 365 (416)
T ss_dssp HHHHHHCSE--EEECCSSCSSCHHHHHHHHTTCCEEEESC----HHHHHHC-CBTTTEEEES-----------------S
T ss_pred HHHHHhCCE--EEECCCcCCCccHHHHHHHcCCCEEEccC----CCChhhe-ecCCCeEEEC-----------------C
Confidence 358888898 77544 45689999999999999764 3455555 3555666542 5
Q ss_pred hhHHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHhc
Q 039701 419 KEDVKKAINMLMDEGEERDERRRRAREYGETAKTAIEEGGSSYLNIKLLIKDILQQA 475 (476)
Q Consensus 419 ~~~l~~~i~~ll~~~~~~~~~r~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~i~~~~ 475 (476)
.+++.++|.++++|++..+.+.+++++.... .-+.....+.+++.++++.
T Consensus 366 ~~~la~~i~~ll~~~~~~~~~~~~a~~~~~~-------~fs~~~~~~~~~~~~~~l~ 415 (416)
T 2x6q_A 366 ANEAVEVVLYLLKHPEVSKEMGAKAKERVRK-------NFIITKHMERYLDILNSLG 415 (416)
T ss_dssp HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH-------HTBHHHHHHHHHHHHHTC-
T ss_pred HHHHHHHHHHHHhCHHHHHHHHHHHHHHHHH-------HcCHHHHHHHHHHHHHHhh
Confidence 6899999999999886666667776665532 2233366666666666543
No 38
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=99.07 E-value=4.2e-09 Score=101.37 Aligned_cols=123 Identities=16% Similarity=0.144 Sum_probs=82.0
Q ss_pred EEEecCCcccCCHHHHHHHHHHHHhCCCCeEEEEcCCCCCchhHHHHh--cCCCeEeeccccHH---HhhhCCCceeeec
Q 039701 282 VYVCLGSLCDCSTRQLIELGLGLEATKKPFIWVIRPGDQAFEKFEERI--EGRGLLIRGWAPQV---VILSHPAIGGFLT 356 (476)
Q Consensus 282 v~vs~GS~~~~~~~~~~~i~~a~~~~~~~~i~~~~~~~~~~~~~~~~~--~~~nv~~~~~vpq~---~ll~~~~~~~~I~ 356 (476)
+++..|+.. ..+....+++|++..+.++++.-.+.. .+.+.+.. ..++|.+.+|+++. .++..+++ +|.
T Consensus 164 ~i~~vG~~~--~~Kg~~~li~a~~~~~~~l~i~G~g~~--~~~l~~~~~~~~~~v~~~g~~~~~~l~~~~~~adv--~v~ 237 (342)
T 2iuy_A 164 FLLFMGRVS--PHKGALEAAAFAHACGRRLVLAGPAWE--PEYFDEITRRYGSTVEPIGEVGGERRLDLLASAHA--VLA 237 (342)
T ss_dssp CEEEESCCC--GGGTHHHHHHHHHHHTCCEEEESCCCC--HHHHHHHHHHHTTTEEECCCCCHHHHHHHHHHCSE--EEE
T ss_pred EEEEEeccc--cccCHHHHHHHHHhcCcEEEEEeCccc--HHHHHHHHHHhCCCEEEeccCCHHHHHHHHHhCCE--EEE
Confidence 344567654 345667788888877877666543332 22222211 13899999999975 68989999 663
Q ss_pred --c-----------cC-hhhHHHHHHcCCCEecccccccchhhHHHHHHh--hcceEEeccCCCCCCcccccCCcccchh
Q 039701 357 --H-----------CG-WNSVLEAVSNGLPMVTWPFFADQFCNEKLVVQV--LRIGVTIGAERPPSLADEERNGVPVKKE 420 (476)
Q Consensus 357 --H-----------gG-~~s~~eal~~GvP~l~~P~~~DQ~~~a~~v~e~--~g~G~~l~~~~~~~~~~~~~~~~~~t~~ 420 (476)
. -| -+++.||+++|+|+|+... ..+...+ +. -+.|... . . +.+
T Consensus 238 ps~~~~~~~~~~~~E~~~~~~~EAma~G~PvI~s~~----~~~~e~~-~~~~~~~g~~~--~-------------~-d~~ 296 (342)
T 2iuy_A 238 MSQAVTGPWGGIWCEPGATVVSEAAVSGTPVVGTGN----GCLAEIV-PSVGEVVGYGT--D-------------F-APD 296 (342)
T ss_dssp CCCCCCCTTCSCCCCCCCHHHHHHHHTTCCEEECCT----TTHHHHG-GGGEEECCSSS--C-------------C-CHH
T ss_pred CCcccccccccccccCccHHHHHHHhcCCCEEEcCC----CChHHHh-cccCCCceEEc--C-------------C-CHH
Confidence 2 33 3689999999999999875 3455555 34 3344332 3 4 889
Q ss_pred HHHHHHHHHhc
Q 039701 421 DVKKAINMLMD 431 (476)
Q Consensus 421 ~l~~~i~~ll~ 431 (476)
++.++|.++++
T Consensus 297 ~l~~~i~~l~~ 307 (342)
T 2iuy_A 297 EARRTLAGLPA 307 (342)
T ss_dssp HHHHHHHTSCC
T ss_pred HHHHHHHHHHH
Confidence 99999999985
No 39
>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}
Probab=99.05 E-value=1.8e-09 Score=105.37 Aligned_cols=346 Identities=14% Similarity=0.083 Sum_probs=185.2
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHHCCCeEEEEeCCc-chhhhhhHhhhcccCCCceEEEEeeCCCcccCCCCCCCCCC
Q 039701 9 LHFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTTPM-NAARFQNVIERGIQSGLRIQVIEFYFPCQEVGLPEGCESWD 87 (476)
Q Consensus 9 ~~vl~~~~p~~GHv~P~l~La~~L~~rGH~Vt~~~~~~-~~~~~~~~~~~~~~~g~~i~~~~i~~~~~~~~~~~~~~~~~ 87 (476)
++|++++ |++-.+.-+.+|.++|.++ +++.++.|.. +...+..... .++++ +.|... +.. .
T Consensus 10 ~~~~~v~-GtRpe~~k~~p~~~~l~~~-~~~~~~~tgqh~~~~~~~~~~----~~~~i-----~~~~~~--l~~-----~ 71 (385)
T 4hwg_A 10 LKVMTIV-GTRPELIKLCCVISEFDKH-TKHILVHTGQNYAYELNQVFF----DDMGI-----RKPDYF--LEV-----A 71 (385)
T ss_dssp CEEEEEE-CSHHHHHHHHHHHHHHHHH-SEEEEEECSCHHHHHHTHHHH----C-CCC-----CCCSEE--CCC-----C
T ss_pred hheeEEE-EcCHhHHHHHHHHHHHHhc-CCEEEEEeCCCCChhHHHHHH----hhCCC-----CCCcee--cCC-----C
Confidence 5676665 8999999999999999887 8877776643 3223333211 12222 111111 111 0
Q ss_pred CCCCcCcHHHHHHHHHHchHHHHHHHHhcCCCCeEEEe--cCCCchhHHHHhHcCCCcEEEecchHHHHHHHhhhhcccc
Q 039701 88 KLPSMALLPKFFAAIEMLRLPLETLFKEIQPKPGCLIS--DVCLPWTVSSACKFNVPRIVFHGFSCFCLLCLHSLSVSKA 165 (476)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~D~vI~--D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~ 165 (476)
.... ..........+.+++++ .+||+||+ |....++..+|.++|||++.+...
T Consensus 72 ---~~~~----~~~~~~~~~~l~~~l~~--~kPD~Vlv~gd~~~~~aalaA~~~~IPv~h~eag---------------- 126 (385)
T 4hwg_A 72 ---ADNT----AKSIGLVIEKVDEVLEK--EKPDAVLFYGDTNSCLSAIAAKRRKIPIFHMEAG---------------- 126 (385)
T ss_dssp ---CCCS----HHHHHHHHHHHHHHHHH--HCCSEEEEESCSGGGGGHHHHHHTTCCEEEESCC----------------
T ss_pred ---CCCH----HHHHHHHHHHHHHHHHh--cCCcEEEEECCchHHHHHHHHHHhCCCEEEEeCC----------------
Confidence 1111 22333345567777877 79999885 334445588999999997753211
Q ss_pred CCCCCCCCcccccCCCCCcccccccccchhhhHHHhHHHHHHhhccccEEEecchhhcCHHHHHHH-Hhcc-CCceEEeC
Q 039701 166 HESVSSDSEYFLVPGLPDRVEITKAQLPEILKLKSFGEPILAAEMASYGVIVNSFEELEPAYVEEY-KNAR-DGKVWCVG 243 (476)
Q Consensus 166 ~~~~~~~~~~~~~Pg~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~-~~~~-~~~v~~vG 243 (476)
+.+ +. ...|. +..+.+.. ..++.++..+-. .-+.+ ..-. +.++..+|
T Consensus 127 ---------------lrs---~~-~~~pe-----e~nR~~~~--~~a~~~~~~te~-----~~~~l~~~G~~~~~I~vtG 175 (385)
T 4hwg_A 127 ---------------NRC---FD-QRVPE-----EINRKIID--HISDVNITLTEH-----ARRYLIAEGLPAELTFKSG 175 (385)
T ss_dssp ---------------CCC---SC-TTSTH-----HHHHHHHH--HHCSEEEESSHH-----HHHHHHHTTCCGGGEEECC
T ss_pred ---------------Ccc---cc-ccCcH-----HHHHHHHH--hhhceeecCCHH-----HHHHHHHcCCCcCcEEEEC
Confidence 000 00 00110 11111111 124455555422 11122 1122 24688889
Q ss_pred -cccCCCCCcccccccCCCCCCCcccccccccCCCCCceEEEecCCcccCC-HHHHHHHHHHHHhC----CCCeEEEEcC
Q 039701 244 -PVSLCNKEDMDKLERGDKTSNDGSGCLKWLDSWQPGSAVYVCLGSLCDCS-TRQLIELGLGLEAT----KKPFIWVIRP 317 (476)
Q Consensus 244 -pl~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~GS~~~~~-~~~~~~i~~a~~~~----~~~~i~~~~~ 317 (476)
|.+.......... ..+++.+.++-.+ ++.|+++.|...... .+.+..+++|+... +..+|+...+
T Consensus 176 np~~D~~~~~~~~~--------~~~~~~~~lgl~~-~~~iLvt~hr~e~~~~~~~l~~ll~al~~l~~~~~~~vv~p~~p 246 (385)
T 4hwg_A 176 SHMPEVLDRFMPKI--------LKSDILDKLSLTP-KQYFLISSHREENVDVKNNLKELLNSLQMLIKEYNFLIIFSTHP 246 (385)
T ss_dssp CSHHHHHHHHHHHH--------HHCCHHHHTTCCT-TSEEEEEECCC-----CHHHHHHHHHHHHHHHHHCCEEEEEECH
T ss_pred CchHHHHHHhhhhc--------chhHHHHHcCCCc-CCEEEEEeCCchhcCcHHHHHHHHHHHHHHHhcCCeEEEEECCh
Confidence 4432110000000 0122333333222 457888877654322 25566777777643 5677776542
Q ss_pred CCCCchhHHHH---h-cCCCeEeecccc---HHHhhhCCCceeeecccChhhHHHHHHcCCCEecccccccchhhHHHHH
Q 039701 318 GDQAFEKFEER---I-EGRGLLIRGWAP---QVVILSHPAIGGFLTHCGWNSVLEAVSNGLPMVTWPFFADQFCNEKLVV 390 (476)
Q Consensus 318 ~~~~~~~~~~~---~-~~~nv~~~~~vp---q~~ll~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~~a~~v~ 390 (476)
.. .+.+.+. . ..+|+.+.+.++ ...++..+++ +|+-.|. .+.||.++|+|+|+++...+.+. .+
T Consensus 247 ~~--~~~l~~~~~~~~~~~~v~l~~~lg~~~~~~l~~~adl--vvt~SGg-v~~EA~alG~Pvv~~~~~ter~e---~v- 317 (385)
T 4hwg_A 247 RT--KKRLEDLEGFKELGDKIRFLPAFSFTDYVKLQMNAFC--ILSDSGT-ITEEASILNLPALNIREAHERPE---GM- 317 (385)
T ss_dssp HH--HHHHHTSGGGGGTGGGEEECCCCCHHHHHHHHHHCSE--EEECCTT-HHHHHHHTTCCEEECSSSCSCTH---HH-
T ss_pred HH--HHHHHHHHHHhcCCCCEEEEcCCCHHHHHHHHHhCcE--EEECCcc-HHHHHHHcCCCEEEcCCCccchh---hh-
Confidence 11 1112111 1 135788766554 4579999999 9998875 46899999999999987554332 23
Q ss_pred HhhcceEEeccCCCCCCcccccCCcccchhHHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHH-hhCCChHHHHHHHHH
Q 039701 391 QVLRIGVTIGAERPPSLADEERNGVPVKKEDVKKAINMLMDEGEERDERRRRAREYGETAKTAI-EEGGSSYLNIKLLIK 469 (476)
Q Consensus 391 e~~g~G~~l~~~~~~~~~~~~~~~~~~t~~~l~~~i~~ll~~~~~~~~~r~~a~~l~~~~~~~~-~~gg~~~~~~~~~~~ 469 (476)
+.|.+..+ . .++++|.+++.++++|++..+.+++++.. . .+|+++.+.++.+.+
T Consensus 318 -~~G~~~lv--~--------------~d~~~i~~ai~~ll~d~~~~~~m~~~~~~--------~~g~g~aa~rI~~~l~~ 372 (385)
T 4hwg_A 318 -DAGTLIMS--G--------------FKAERVLQAVKTITEEHDNNKRTQGLVPD--------YNEAGLVSKKILRIVLS 372 (385)
T ss_dssp -HHTCCEEC--C--------------SSHHHHHHHHHHHHTTCBTTBCCSCCCHH--------HHTCCCHHHHHHHHHHH
T ss_pred -hcCceEEc--C--------------CCHHHHHHHHHHHHhChHHHHHhhccCCC--------CCCCChHHHHHHHHHHH
Confidence 55766544 2 37899999999999987544444333322 2 446666666555554
Q ss_pred HH
Q 039701 470 DI 471 (476)
Q Consensus 470 ~i 471 (476)
.+
T Consensus 373 ~~ 374 (385)
T 4hwg_A 373 YV 374 (385)
T ss_dssp HH
T ss_pred Hh
Confidence 43
No 40
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*
Probab=98.88 E-value=1.3e-06 Score=92.66 Aligned_cols=143 Identities=12% Similarity=0.074 Sum_probs=89.4
Q ss_pred eEEEecCCcccCCHHHHHHHHHHHHhC-----CCCeEEEEcCCCC---------CchhHHHHh----cCCCeEeec----
Q 039701 281 AVYVCLGSLCDCSTRQLIELGLGLEAT-----KKPFIWVIRPGDQ---------AFEKFEERI----EGRGLLIRG---- 338 (476)
Q Consensus 281 vv~vs~GS~~~~~~~~~~~i~~a~~~~-----~~~~i~~~~~~~~---------~~~~~~~~~----~~~nv~~~~---- 338 (476)
.+++..|.... .+.+..+++|++.. +.+++++-++... ..+.+.+.+ ..++|.+.+
T Consensus 573 ~vIl~vGRl~~--~KGid~LIeA~~~L~~~~~~v~LvIvG~g~~~~~~~~e~~~~~~~L~~li~~lgL~~~V~flG~~~~ 650 (816)
T 3s28_A 573 PILFTMARLDR--VKNLSGLVEWYGKNTRLRELANLVVVGGDRRKESKDNEEKAEMKKMYDLIEEYKLNGQFRWISSQMD 650 (816)
T ss_dssp CEEEEECCCCT--TTTHHHHHHHHHHCHHHHHHCEEEEECCCTTSCCCCHHHHHHHHHHHHHHHHTTCBBBEEEECCCCC
T ss_pred eEEEEEccCcc--cCCHHHHHHHHHHHHhhCCCeEEEEEeCCCcccccchhhHHHHHHHHHHHHHcCCCCcEEEccCccc
Confidence 45566777653 45566677777654 2455555443310 011222221 247888887
Q ss_pred cccHHHhhh----CCCceeeecc----cChhhHHHHHHcCCCEecccccccchhhHHHHHHhhcceEEeccCCCCCCccc
Q 039701 339 WAPQVVILS----HPAIGGFLTH----CGWNSVLEAVSNGLPMVTWPFFADQFCNEKLVVQVLRIGVTIGAERPPSLADE 410 (476)
Q Consensus 339 ~vpq~~ll~----~~~~~~~I~H----gG~~s~~eal~~GvP~l~~P~~~DQ~~~a~~v~e~~g~G~~l~~~~~~~~~~~ 410 (476)
++++.++.. .+++ +|.- |--.++.||+++|+|+|+. |.......+ +.-+.|..++..
T Consensus 651 ~v~~~eL~~~~~~aaDv--fV~PS~~EgfglvllEAMA~G~PVIas----d~GG~~EiV-~dg~~Gllv~p~-------- 715 (816)
T 3s28_A 651 RVRNGELYRYICDTKGA--FVQPALYEAFGLTVVEAMTCGLPTFAT----CKGGPAEII-VHGKSGFHIDPY-------- 715 (816)
T ss_dssp HHHHHHHHHHHHHTTCE--EEECCSCBSSCHHHHHHHHTTCCEEEE----SSBTHHHHC-CBTTTBEEECTT--------
T ss_pred cCCHHHHHHHHHhcCeE--EEECCCccCccHHHHHHHHcCCCEEEe----CCCChHHHH-ccCCcEEEeCCC--------
Confidence 445455544 4566 7632 3346899999999999995 455566666 466678777554
Q ss_pred ccCCcccchhHHHHHHHHHh----cCChhhHHHHHHHHHHH
Q 039701 411 ERNGVPVKKEDVKKAINMLM----DEGEERDERRRRAREYG 447 (476)
Q Consensus 411 ~~~~~~~t~~~l~~~i~~ll----~~~~~~~~~r~~a~~l~ 447 (476)
+.++++++|.+++ +|++..+.+.+++++..
T Consensus 716 -------D~e~LA~aI~~lL~~Ll~d~~~~~~m~~~ar~~a 749 (816)
T 3s28_A 716 -------HGDQAADTLADFFTKCKEDPSHWDEISKGGLQRI 749 (816)
T ss_dssp -------SHHHHHHHHHHHHHHHHHCTHHHHHHHHHHHHHH
T ss_pred -------CHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHH
Confidence 7788888886665 88877777777776655
No 41
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=98.78 E-value=1.4e-06 Score=87.91 Aligned_cols=159 Identities=10% Similarity=-0.028 Sum_probs=94.2
Q ss_pred EEEecCCcccCCHHHHHHHHHHHHh---CCCCeEEEEcCCCCCchhHHHHh--cCCCeE-eeccccHH--HhhhCCCcee
Q 039701 282 VYVCLGSLCDCSTRQLIELGLGLEA---TKKPFIWVIRPGDQAFEKFEERI--EGRGLL-IRGWAPQV--VILSHPAIGG 353 (476)
Q Consensus 282 v~vs~GS~~~~~~~~~~~i~~a~~~---~~~~~i~~~~~~~~~~~~~~~~~--~~~nv~-~~~~vpq~--~ll~~~~~~~ 353 (476)
+++..|.... .+.+..+++|++. .+.+++++-.+.....+.+.+.. .++++. +.++.... .++..+++
T Consensus 293 ~i~~vGrl~~--~Kg~~~li~a~~~l~~~~~~l~ivG~g~~~~~~~l~~~~~~~~~~v~~~~g~~~~~~~~~~~~adv-- 368 (485)
T 1rzu_A 293 LFCVISRLTW--QKGIDLMAEAVDEIVSLGGRLVVLGAGDVALEGALLAAASRHHGRVGVAIGYNEPLSHLMQAGCDA-- 368 (485)
T ss_dssp EEEEESCBST--TTTHHHHHTTHHHHHHTTCEEEEEECBCHHHHHHHHHHHHHTTTTEEEEESCCHHHHHHHHHHCSE--
T ss_pred EEEEEccCcc--ccCHHHHHHHHHHHHhcCceEEEEeCCchHHHHHHHHHHHhCCCcEEEecCCCHHHHHHHHhcCCE--
Confidence 6667787754 2344445555443 36666655443210112222222 246887 67884332 58889998
Q ss_pred eecc----cChhhHHHHHHcCCCEecccccccchhhHHHHHHhh---------cceEEeccCCCCCCcccccCCcccchh
Q 039701 354 FLTH----CGWNSVLEAVSNGLPMVTWPFFADQFCNEKLVVQVL---------RIGVTIGAERPPSLADEERNGVPVKKE 420 (476)
Q Consensus 354 ~I~H----gG~~s~~eal~~GvP~l~~P~~~DQ~~~a~~v~e~~---------g~G~~l~~~~~~~~~~~~~~~~~~t~~ 420 (476)
+|.- |--+++.||+++|+|+|+... ......+ +.- +.|...+. -+.+
T Consensus 369 ~v~pS~~E~~~~~~lEAma~G~PvI~s~~----gg~~e~v-~~~~~~~~~~~~~~G~l~~~---------------~d~~ 428 (485)
T 1rzu_A 369 IIIPSRFEPCGLTQLYALRYGCIPVVART----GGLADTV-IDANHAALASKAATGVQFSP---------------VTLD 428 (485)
T ss_dssp EEECCSCCSSCSHHHHHHHHTCEEEEESS----HHHHHHC-CBCCHHHHHTTCCCBEEESS---------------CSHH
T ss_pred EEECcccCCCCHHHHHHHHCCCCEEEeCC----CChhhee-cccccccccccCCcceEeCC---------------CCHH
Confidence 7732 334689999999999999765 3444445 343 56766644 3789
Q ss_pred HHHHHHHHHh---cCChhhHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHh
Q 039701 421 DVKKAINMLM---DEGEERDERRRRAREYGETAKTAIEEGGSSYLNIKLLIKDILQQ 474 (476)
Q Consensus 421 ~l~~~i~~ll---~~~~~~~~~r~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~i~~~ 474 (476)
+|+++|.+++ +|++..+++.+++++ +.-+-....+++++..+++
T Consensus 429 ~la~~i~~ll~~~~~~~~~~~~~~~~~~----------~~fs~~~~~~~~~~~y~~~ 475 (485)
T 1rzu_A 429 GLKQAIRRTVRYYHDPKLWTQMQKLGMK----------SDVSWEKSAGLYAALYSQL 475 (485)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHT----------CCCBHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHH----------HhCChHHHHHHHHHHHHHh
Confidence 9999999999 676544445444431 2444445556555555443
No 42
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=98.71 E-value=3.2e-06 Score=85.22 Aligned_cols=160 Identities=11% Similarity=-0.045 Sum_probs=94.6
Q ss_pred eEEEecCCcccCCHHHHHHHHHHHHh---CCCCeEEEEcCCCCCchhHHHHh--cCCCeE-eeccccH--HHhhhCCCce
Q 039701 281 AVYVCLGSLCDCSTRQLIELGLGLEA---TKKPFIWVIRPGDQAFEKFEERI--EGRGLL-IRGWAPQ--VVILSHPAIG 352 (476)
Q Consensus 281 vv~vs~GS~~~~~~~~~~~i~~a~~~---~~~~~i~~~~~~~~~~~~~~~~~--~~~nv~-~~~~vpq--~~ll~~~~~~ 352 (476)
.+++..|.... .+.+..+++|++. .+.+++++-.+.....+.+.+.. .++++. +.++... ..++..+++
T Consensus 293 ~~i~~vGrl~~--~Kg~~~li~a~~~l~~~~~~l~ivG~g~~~~~~~l~~~~~~~~~~v~~~~g~~~~~~~~~~~~adv- 369 (485)
T 2qzs_A 293 PLFAVVSRLTS--QKGLDLVLEALPGLLEQGGQLALLGAGDPVLQEGFLAAAAEYPGQVGVQIGYHEAFSHRIMGGADV- 369 (485)
T ss_dssp CEEEEEEEESG--GGCHHHHHHHHHHHHHTTCEEEEEEEECHHHHHHHHHHHHHSTTTEEEEESCCHHHHHHHHHHCSE-
T ss_pred eEEEEeccCcc--ccCHHHHHHHHHHHhhCCcEEEEEeCCchHHHHHHHHHHHhCCCcEEEeCCCCHHHHHHHHHhCCE-
Confidence 35556676643 3444555555553 36666655443210012232222 246885 7788443 268889998
Q ss_pred eeecc----cChhhHHHHHHcCCCEecccccccchhhHHHHHHhh---------cceEEeccCCCCCCcccccCCcccch
Q 039701 353 GFLTH----CGWNSVLEAVSNGLPMVTWPFFADQFCNEKLVVQVL---------RIGVTIGAERPPSLADEERNGVPVKK 419 (476)
Q Consensus 353 ~~I~H----gG~~s~~eal~~GvP~l~~P~~~DQ~~~a~~v~e~~---------g~G~~l~~~~~~~~~~~~~~~~~~t~ 419 (476)
+|.- |.-+++.||+++|+|+|+... ..+...+ +.- +.|...+.. +.
T Consensus 370 -~v~pS~~E~~g~~~lEAma~G~PvI~s~~----gg~~e~v-~~~~~~~~~~~~~~G~l~~~~---------------d~ 428 (485)
T 2qzs_A 370 -ILVPSRFEPCGLTQLYGLKYGTLPLVRRT----GGLADTV-SDCSLENLADGVASGFVFEDS---------------NA 428 (485)
T ss_dssp -EEECCSCCSSCSHHHHHHHHTCEEEEESS----HHHHHHC-CBCCHHHHHTTCCCBEEECSS---------------SH
T ss_pred -EEECCccCCCcHHHHHHHHCCCCEEECCC----CCcccee-ccCccccccccccceEEECCC---------------CH
Confidence 7632 334688899999999999754 3444445 343 567666543 78
Q ss_pred hHHHHHHHHHh---cCChhhHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHh
Q 039701 420 EDVKKAINMLM---DEGEERDERRRRAREYGETAKTAIEEGGSSYLNIKLLIKDILQQ 474 (476)
Q Consensus 420 ~~l~~~i~~ll---~~~~~~~~~r~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~i~~~ 474 (476)
++|+++|.+++ +|++..+++.+++++ +.-+-...++++++..+++
T Consensus 429 ~~la~~i~~ll~~~~~~~~~~~~~~~~~~----------~~fs~~~~~~~~~~ly~~~ 476 (485)
T 2qzs_A 429 WSLLRAIRRAFVLWSRPSLWRFVQRQAMA----------MDFSWQVAAKSYRELYYRL 476 (485)
T ss_dssp HHHHHHHHHHHHHHTSHHHHHHHHHHHHH----------CCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHh----------hcCCHHHHHHHHHHHHHHh
Confidence 99999999999 676444444444431 2455555666666555543
No 43
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=98.66 E-value=2.2e-05 Score=80.74 Aligned_cols=118 Identities=12% Similarity=-0.020 Sum_probs=77.0
Q ss_pred CCeEeeccccHH---HhhhCCCceeee---cccChhhHHHHHHcCCCEecccccccchhh-HHHHHHhhcceEEeccCCC
Q 039701 332 RGLLIRGWAPQV---VILSHPAIGGFL---THCGWNSVLEAVSNGLPMVTWPFFADQFCN-EKLVVQVLRIGVTIGAERP 404 (476)
Q Consensus 332 ~nv~~~~~vpq~---~ll~~~~~~~~I---~HgG~~s~~eal~~GvP~l~~P~~~DQ~~~-a~~v~e~~g~G~~l~~~~~ 404 (476)
++|.+.+++|+. .++..+++ +| ..|+.+++.||+++|+|+|++|-..=.... +..+ +..|+...+ .
T Consensus 434 ~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~~~g~~~lEAma~G~Pvv~~~g~~~~s~~~~~~l-~~~g~~e~v--~-- 506 (568)
T 2vsy_A 434 QRLVFMPKLPHPQYLARYRHADL--FLDTHPYNAHTTASDALWTGCPVLTTPGETFAARVAGSLN-HHLGLDEMN--V-- 506 (568)
T ss_dssp GGEEEECCCCHHHHHHHGGGCSE--EECCSSSCCSHHHHHHHHTTCCEEBCCCSSGGGSHHHHHH-HHHTCGGGB--C--
T ss_pred hHEEeeCCCCHHHHHHHHhcCCE--EeeCCCCCCcHHHHHHHhCCCCEEeccCCCchHHHHHHHH-HHCCChhhh--c--
Confidence 789999999844 57888888 76 236667899999999999997753211222 3344 355555433 2
Q ss_pred CCCcccccCCcccchhHHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHH
Q 039701 405 PSLADEERNGVPVKKEDVKKAINMLMDEGEERDERRRRAREYGETAKTAIEEGGSSYLNIKLLIKDILQ 473 (476)
Q Consensus 405 ~~~~~~~~~~~~~t~~~l~~~i~~ll~~~~~~~~~r~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~i~~ 473 (476)
-+.+++.++|.++++|++..+.+++++++.... .+..+.....+.+.+..++
T Consensus 507 ------------~~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~-----~~~f~~~~~~~~~~~~y~~ 558 (568)
T 2vsy_A 507 ------------ADDAAFVAKAVALASDPAALTALHARVDVLRRA-----SGVFHMDGFADDFGALLQA 558 (568)
T ss_dssp ------------SSHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH-----SSTTCHHHHHHHHHHHHHH
T ss_pred ------------CCHHHHHHHHHHHhcCHHHHHHHHHHHHHhhhc-----CCCCCHHHHHHHHHHHHHH
Confidence 278999999999999886666666666554411 1234444555555554443
No 44
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=98.66 E-value=1.6e-06 Score=85.35 Aligned_cols=162 Identities=9% Similarity=0.067 Sum_probs=96.8
Q ss_pred eEEEecCCcccCCHHHHHHHHHHHHh-----CCCCeEEEEcCCCCCc----hhHHHHh----cCCC-------eEeeccc
Q 039701 281 AVYVCLGSLCDCSTRQLIELGLGLEA-----TKKPFIWVIRPGDQAF----EKFEERI----EGRG-------LLIRGWA 340 (476)
Q Consensus 281 vv~vs~GS~~~~~~~~~~~i~~a~~~-----~~~~~i~~~~~~~~~~----~~~~~~~----~~~n-------v~~~~~v 340 (476)
.+++..|.... .+.+..+++|++. .+.+++++-.+..... +.+.+.. ..++ +.+.+|+
T Consensus 185 ~~il~vGr~~~--~Kg~~~li~a~~~l~~~~~~~~l~ivG~g~~~~~~~l~~~~~~~~~~~~l~~~v~~l~~vv~~~g~~ 262 (413)
T 3oy2_A 185 VLFLNMNRNTA--RKRLDIYVLAAARFISKYPDAKVRFLCNSHHESKFDLHSIALRELVASGVDNVFTHLNKIMINRTVL 262 (413)
T ss_dssp EEEECCSCSSG--GGTHHHHHHHHHHHHHHCTTCCEEEEEECCTTCSCCHHHHHHHHHHHHTCSCHHHHHTTEEEECSCC
T ss_pred eEEEEcCCCch--hcCcHHHHHHHHHHHHhCCCcEEEEEeCCcccchhhHHHHHHHHHHHcCcccccccccceeeccCcC
Confidence 56677887543 3444555555543 3677776655543211 2232211 1233 7788999
Q ss_pred cHH---HhhhCCCceeeec----ccChhhHHHHHHcCCCEecccccccchhhHHHHHHhhcc----------------eE
Q 039701 341 PQV---VILSHPAIGGFLT----HCGWNSVLEAVSNGLPMVTWPFFADQFCNEKLVVQVLRI----------------GV 397 (476)
Q Consensus 341 pq~---~ll~~~~~~~~I~----HgG~~s~~eal~~GvP~l~~P~~~DQ~~~a~~v~e~~g~----------------G~ 397 (476)
++. .++..+++ +|. -|.-+++.||+++|+|+|+... ......+ +. |. |.
T Consensus 263 ~~~~~~~~~~~adv--~v~pS~~E~~~~~~lEAma~G~PvI~s~~----~g~~e~v-~~-~~~~~i~~~~~~~~~~~~G~ 334 (413)
T 3oy2_A 263 TDERVDMMYNACDV--IVNCSSGEGFGLCSAEGAVLGKPLIISAV----GGADDYF-SG-DCVYKIKPSAWISVDDRDGI 334 (413)
T ss_dssp CHHHHHHHHHHCSE--EEECCSCCSSCHHHHHHHTTTCCEEEECC----HHHHHHS-CT-TTSEEECCCEEEECTTTCSS
T ss_pred CHHHHHHHHHhCCE--EEeCCCcCCCCcHHHHHHHcCCCEEEcCC----CChHHHH-cc-CcccccccccccccccccCc
Confidence 844 47888998 663 2334589999999999999654 3344444 12 22 33
Q ss_pred --EeccCCCCCCcccccCCcccchhHHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHhc
Q 039701 398 --TIGAERPPSLADEERNGVPVKKEDVKKAINMLMDEGEERDERRRRAREYGETAKTAIEEGGSSYLNIKLLIKDILQQA 475 (476)
Q Consensus 398 --~l~~~~~~~~~~~~~~~~~~t~~~l~~~i~~ll~~~~~~~~~r~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~i~~~~ 475 (476)
.+.. -+.++|.++| ++++|++..+++.+++++... +.-+-....+.+.+.++++.
T Consensus 335 ~gl~~~---------------~d~~~la~~i-~l~~~~~~~~~~~~~a~~~~~-------~~fs~~~~~~~~~~~~~~~~ 391 (413)
T 3oy2_A 335 GGIEGI---------------IDVDDLVEAF-TFFKDEKNRKEYGKRVQDFVK-------TKPTWDDISSDIIDFFNSLL 391 (413)
T ss_dssp CCEEEE---------------CCHHHHHHHH-HHTTSHHHHHHHHHHHHHHHT-------TSCCHHHHHHHHHHHHHHHT
T ss_pred ceeeCC---------------CCHHHHHHHH-HHhcCHHHHHHHHHHHHHHHH-------HhCCHHHHHHHHHHHHHHHH
Confidence 3322 3889999999 999987555555555555432 23444466666666666543
No 45
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8
Probab=98.64 E-value=3.2e-07 Score=79.20 Aligned_cols=136 Identities=11% Similarity=0.117 Sum_probs=92.8
Q ss_pred EEEecCCcccCCHHHHHHHHHHHHhC-CCCeEEEEcCCCCCchhHHHHh------cCCCeEeeccccH---HHhhhCCCc
Q 039701 282 VYVCLGSLCDCSTRQLIELGLGLEAT-KKPFIWVIRPGDQAFEKFEERI------EGRGLLIRGWAPQ---VVILSHPAI 351 (476)
Q Consensus 282 v~vs~GS~~~~~~~~~~~i~~a~~~~-~~~~i~~~~~~~~~~~~~~~~~------~~~nv~~~~~vpq---~~ll~~~~~ 351 (476)
+++..|+... .+.+..++++++.. +.++++.-.+... +.+.+.. .++||.+.+|+++ ..++..+++
T Consensus 25 ~i~~~G~~~~--~Kg~~~li~a~~~l~~~~l~i~G~~~~~--~~l~~~~~~~~~~l~~~v~~~g~~~~~e~~~~~~~adi 100 (177)
T 2f9f_A 25 FWLSVNRIYP--EKRIELQLEVFKKLQDEKLYIVGWFSKG--DHAERYARKIMKIAPDNVKFLGSVSEEELIDLYSRCKG 100 (177)
T ss_dssp CEEEECCSSG--GGTHHHHHHHHHHCTTSCEEEEBCCCTT--STHHHHHHHHHHHSCTTEEEEESCCHHHHHHHHHHCSE
T ss_pred EEEEEecccc--ccCHHHHHHHHHhCCCcEEEEEecCccH--HHHHHHHHhhhcccCCcEEEeCCCCHHHHHHHHHhCCE
Confidence 4456677652 45567788888876 5666665443331 2222221 2569999999997 468989998
Q ss_pred eeeec---ccCh-hhHHHHHHcCCCEecccccccchhhHHHHHHhhcceEEeccCCCCCCcccccCCcccchhHHHHHHH
Q 039701 352 GGFLT---HCGW-NSVLEAVSNGLPMVTWPFFADQFCNEKLVVQVLRIGVTIGAERPPSLADEERNGVPVKKEDVKKAIN 427 (476)
Q Consensus 352 ~~~I~---HgG~-~s~~eal~~GvP~l~~P~~~DQ~~~a~~v~e~~g~G~~l~~~~~~~~~~~~~~~~~~t~~~l~~~i~ 427 (476)
+|. +.|. .++.||+++|+|+|+... ..+...+ +..+.|..+ . -+.+++.++|.
T Consensus 101 --~v~ps~~e~~~~~~~Eama~G~PvI~~~~----~~~~e~i-~~~~~g~~~-~---------------~d~~~l~~~i~ 157 (177)
T 2f9f_A 101 --LLCTAKDEDFGLTPIEAMASGKPVIAVNE----GGFKETV-INEKTGYLV-N---------------ADVNEIIDAMK 157 (177)
T ss_dssp --EEECCSSCCSCHHHHHHHHTTCCEEEESS----HHHHHHC-CBTTTEEEE-C---------------SCHHHHHHHHH
T ss_pred --EEeCCCcCCCChHHHHHHHcCCcEEEeCC----CCHHHHh-cCCCccEEe-C---------------CCHHHHHHHHH
Confidence 776 3344 489999999999999754 4555666 466678777 3 37899999999
Q ss_pred HHhcCChh-hHHHHHHHH
Q 039701 428 MLMDEGEE-RDERRRRAR 444 (476)
Q Consensus 428 ~ll~~~~~-~~~~r~~a~ 444 (476)
++++|++. ++.++++|+
T Consensus 158 ~l~~~~~~~~~~~~~~a~ 175 (177)
T 2f9f_A 158 KVSKNPDKFKKDCFRRAK 175 (177)
T ss_dssp HHHHCTTTTHHHHHHHHH
T ss_pred HHHhCHHHHHHHHHHHHh
Confidence 99988854 344444443
No 46
>2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A*
Probab=98.48 E-value=6.2e-05 Score=73.02 Aligned_cols=99 Identities=11% Similarity=0.168 Sum_probs=74.1
Q ss_pred CeEeecccc-HHHhhhCCCceeeecc-----cChhhHHHHHHcCCCEecccccccchhhHHHHHHhhcceEEeccCCCCC
Q 039701 333 GLLIRGWAP-QVVILSHPAIGGFLTH-----CGWNSVLEAVSNGLPMVTWPFFADQFCNEKLVVQVLRIGVTIGAERPPS 406 (476)
Q Consensus 333 nv~~~~~vp-q~~ll~~~~~~~~I~H-----gG~~s~~eal~~GvP~l~~P~~~DQ~~~a~~v~e~~g~G~~l~~~~~~~ 406 (476)
++++.++.. -..++..+++ ++.- +|..++.||+++|+|+|+-|...+.+.....+ .+.|.+... .
T Consensus 261 ~v~~~~~~~dl~~~y~~aDv--~vl~ss~~e~gg~~~lEAmA~G~PVI~~~~~~~~~e~~~~~-~~~G~l~~~--~---- 331 (374)
T 2xci_A 261 DVILVDRFGILKELYPVGKI--AIVGGTFVNIGGHNLLEPTCWGIPVIYGPYTHKVNDLKEFL-EKEGAGFEV--K---- 331 (374)
T ss_dssp SEEECCSSSCHHHHGGGEEE--EEECSSSSSSCCCCCHHHHTTTCCEEECSCCTTSHHHHHHH-HHTTCEEEC--C----
T ss_pred cEEEECCHHHHHHHHHhCCE--EEECCcccCCCCcCHHHHHHhCCCEEECCCccChHHHHHHH-HHCCCEEEe--C----
Confidence 456666554 3468888887 6642 23478999999999999878777777766665 355666443 3
Q ss_pred CcccccCCcccchhHHHHHHHHHhcCChhhHHHHHHHHHHHHHHHH
Q 039701 407 LADEERNGVPVKKEDVKKAINMLMDEGEERDERRRRAREYGETAKT 452 (476)
Q Consensus 407 ~~~~~~~~~~~t~~~l~~~i~~ll~~~~~~~~~r~~a~~l~~~~~~ 452 (476)
+.++|.++|.++++| +.+++|.+++++..++-..
T Consensus 332 -----------d~~~La~ai~~ll~d-~~r~~mg~~ar~~~~~~~g 365 (374)
T 2xci_A 332 -----------NETELVTKLTELLSV-KKEIKVEEKSREIKGCYLE 365 (374)
T ss_dssp -----------SHHHHHHHHHHHHHS-CCCCCHHHHHHHHHHHHHH
T ss_pred -----------CHHHHHHHHHHHHhH-HHHHHHHHHHHHHHHhccc
Confidence 678999999999999 8889999999988877553
No 47
>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*
Probab=98.07 E-value=0.00038 Score=68.27 Aligned_cols=115 Identities=14% Similarity=0.023 Sum_probs=74.8
Q ss_pred eEEEecCCcccCCHHHHHHHHHHHHh--CCCCeEEEEcCCCCCchhHHHHhcCCCeEeeccccHH---HhhhCCCceeee
Q 039701 281 AVYVCLGSLCDCSTRQLIELGLGLEA--TKKPFIWVIRPGDQAFEKFEERIEGRGLLIRGWAPQV---VILSHPAIGGFL 355 (476)
Q Consensus 281 vv~vs~GS~~~~~~~~~~~i~~a~~~--~~~~~i~~~~~~~~~~~~~~~~~~~~nv~~~~~vpq~---~ll~~~~~~~~I 355 (476)
.+++..|++.. .... +.++.+ .+.+++++ |.+. .... -..+||.+.+++|+. .++..+++ +|
T Consensus 223 ~~i~~vGrl~~-~Kg~----~~~l~~~~~~~~l~iv-G~g~--~~~~---~l~~~V~f~G~~~~~~l~~~~~~adv--~v 289 (406)
T 2hy7_A 223 IHAVAVGSMLF-DPEF----FVVASKAFPQVTFHVI-GSGM--GRHP---GYGDNVIVYGEMKHAQTIGYIKHARF--GI 289 (406)
T ss_dssp EEEEEECCTTB-CHHH----HHHHHHHCTTEEEEEE-SCSS--CCCT---TCCTTEEEECCCCHHHHHHHHHTCSE--EE
T ss_pred cEEEEEecccc-ccCH----HHHHHHhCCCeEEEEE-eCch--HHhc---CCCCCEEEcCCCCHHHHHHHHHhcCE--EE
Confidence 45566787754 2333 333332 34454444 4332 1111 125799999999865 47888998 66
Q ss_pred c---ccCh-hhHHHHH-------HcCCCEecccccccchhhHHHHHHhhcceEE-eccCCCCCCcccccCCcccchhHHH
Q 039701 356 T---HCGW-NSVLEAV-------SNGLPMVTWPFFADQFCNEKLVVQVLRIGVT-IGAERPPSLADEERNGVPVKKEDVK 423 (476)
Q Consensus 356 ~---HgG~-~s~~eal-------~~GvP~l~~P~~~DQ~~~a~~v~e~~g~G~~-l~~~~~~~~~~~~~~~~~~t~~~l~ 423 (476)
. +-|. +++.||+ ++|+|+|+... + +.-..|.. ++.. +.++|+
T Consensus 290 ~ps~~E~~~~~~lEAm~Kl~eYla~G~PVIas~~----------v-~~~~~G~l~v~~~---------------d~~~la 343 (406)
T 2hy7_A 290 APYASEQVPVYLADSSMKLLQYDFFGLPAVCPNA----------V-VGPYKSRFGYTPG---------------NADSVI 343 (406)
T ss_dssp CCBSCSCCCTTHHHHCHHHHHHHHHTCCEEEEGG----------G-TCSCSSEEEECTT---------------CHHHHH
T ss_pred ECCCcccCchHHHHHHHHHHHHhhCCCcEEEehh----------c-ccCcceEEEeCCC---------------CHHHHH
Confidence 4 3343 5788999 99999999865 5 35455765 5443 789999
Q ss_pred HHHHHHhcCCh
Q 039701 424 KAINMLMDEGE 434 (476)
Q Consensus 424 ~~i~~ll~~~~ 434 (476)
++|.++++|++
T Consensus 344 ~ai~~ll~~~~ 354 (406)
T 2hy7_A 344 AAITQALEAPR 354 (406)
T ss_dssp HHHHHHHHCCC
T ss_pred HHHHHHHhCcc
Confidence 99999999873
No 48
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori}
Probab=98.05 E-value=5.4e-05 Score=63.98 Aligned_cols=143 Identities=14% Similarity=0.158 Sum_probs=90.1
Q ss_pred ceEEEecCCcccCCHHHHHHHHHHHHhCC----CCeEEEEcCCCCCchhHHHHh--cCCCeEeeccccHH---HhhhCCC
Q 039701 280 SAVYVCLGSLCDCSTRQLIELGLGLEATK----KPFIWVIRPGDQAFEKFEERI--EGRGLLIRGWAPQV---VILSHPA 350 (476)
Q Consensus 280 ~vv~vs~GS~~~~~~~~~~~i~~a~~~~~----~~~i~~~~~~~~~~~~~~~~~--~~~nv~~~~~vpq~---~ll~~~~ 350 (476)
+++++..|+... .+.+..+++|+.... .++++ ++.+.. .+.+.+.. ...++.+ +|+|+. .++..++
T Consensus 2 ~~~i~~~G~~~~--~Kg~~~li~a~~~l~~~~~~~l~i-~G~g~~-~~~~~~~~~~~~~~v~~-g~~~~~~~~~~~~~ad 76 (166)
T 3qhp_A 2 PFKIAMVGRYSN--EKNQSVLIKAVALSKYKQDIVLLL-KGKGPD-EKKIKLLAQKLGVKAEF-GFVNSNELLEILKTCT 76 (166)
T ss_dssp CEEEEEESCCST--TTTHHHHHHHHHTCTTGGGEEEEE-ECCSTT-HHHHHHHHHHHTCEEEC-CCCCHHHHHHHHTTCS
T ss_pred ceEEEEEeccch--hcCHHHHHHHHHHhccCCCeEEEE-EeCCcc-HHHHHHHHHHcCCeEEE-eecCHHHHHHHHHhCC
Confidence 356677787753 355667788887653 33333 333321 22333322 1337888 999865 4788888
Q ss_pred ceeeec----ccChhhHHHHHHcCC-CEecccccccchhhHHHHHHhhcceEEeccCCCCCCcccccCCcccchhHHHHH
Q 039701 351 IGGFLT----HCGWNSVLEAVSNGL-PMVTWPFFADQFCNEKLVVQVLRIGVTIGAERPPSLADEERNGVPVKKEDVKKA 425 (476)
Q Consensus 351 ~~~~I~----HgG~~s~~eal~~Gv-P~l~~P~~~DQ~~~a~~v~e~~g~G~~l~~~~~~~~~~~~~~~~~~t~~~l~~~ 425 (476)
+ +|. -|.-.++.||+++|+ |+|+..... .....+ +.-+. .+.. -+.+++.++
T Consensus 77 v--~v~ps~~e~~~~~~~Eama~G~vPvi~~~~~~---~~~~~~-~~~~~--~~~~---------------~~~~~l~~~ 133 (166)
T 3qhp_A 77 L--YVHAANVESEAIACLEAISVGIVPVIANSPLS---ATRQFA-LDERS--LFEP---------------NNAKDLSAK 133 (166)
T ss_dssp E--EEECCCSCCCCHHHHHHHHTTCCEEEECCTTC---GGGGGC-SSGGG--EECT---------------TCHHHHHHH
T ss_pred E--EEECCcccCccHHHHHHHhcCCCcEEeeCCCC---chhhhc-cCCce--EEcC---------------CCHHHHHHH
Confidence 8 775 233469999999996 999943222 222222 23222 2322 478999999
Q ss_pred HHHHhcCChhhHHHHHHHHHHHHHH
Q 039701 426 INMLMDEGEERDERRRRAREYGETA 450 (476)
Q Consensus 426 i~~ll~~~~~~~~~r~~a~~l~~~~ 450 (476)
|.++++|++..+++.+++++..+.+
T Consensus 134 i~~l~~~~~~~~~~~~~~~~~~~~~ 158 (166)
T 3qhp_A 134 IDWWLENKLERERMQNEYAKSALNY 158 (166)
T ss_dssp HHHHHHCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhCHHHHHHHHHHHHHHHHHC
Confidence 9999999877788888888766543
No 49
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=97.84 E-value=0.00038 Score=73.39 Aligned_cols=149 Identities=15% Similarity=0.141 Sum_probs=100.5
Q ss_pred CCCceEEEecCCcccCCHHHHHHHHHHHHhCCCCeEEEEcCCCCCchhHHH-----HhcCCCeEeeccccHHH---hhhC
Q 039701 277 QPGSAVYVCLGSLCDCSTRQLIELGLGLEATKKPFIWVIRPGDQAFEKFEE-----RIEGRGLLIRGWAPQVV---ILSH 348 (476)
Q Consensus 277 ~~~~vv~vs~GS~~~~~~~~~~~i~~a~~~~~~~~i~~~~~~~~~~~~~~~-----~~~~~nv~~~~~vpq~~---ll~~ 348 (476)
++..+||.||.+....+++.+..-++-|++.+.-++|...........+.. .+.++.+++.+..|..+ .+..
T Consensus 520 p~~~v~f~~fN~~~Ki~p~~~~~W~~IL~~vP~S~L~Ll~~~~~~~~~l~~~~~~~gi~~~r~~f~~~~~~~~~l~~~~~ 599 (723)
T 4gyw_A 520 PEDAIVYCNFNQLYKIDPSTLQMWANILKRVPNSVLWLLRFPAVGEPNIQQYAQNMGLPQNRIIFSPVAPKEEHVRRGQL 599 (723)
T ss_dssp CTTSEEEECCSCGGGCCHHHHHHHHHHHHHCSSEEEEEEETTGGGHHHHHHHHHHTTCCGGGEEEEECCCHHHHHHHGGG
T ss_pred CCCCEEEEeCCccccCCHHHHHHHHHHHHhCCCCeEEEEeCcHHHHHHHHHHHHhcCCCcCeEEECCCCCHHHHHHHhCC
Confidence 345599999999888999999999999999999999988765432222222 23467888888888554 5566
Q ss_pred CCceeeec---ccChhhHHHHHHcCCCEecccccccch-hhHHHHHHhhcceEEeccCCCCCCcccccCCcccchhHHHH
Q 039701 349 PAIGGFLT---HCGWNSVLEAVSNGLPMVTWPFFADQF-CNEKLVVQVLRIGVTIGAERPPSLADEERNGVPVKKEDVKK 424 (476)
Q Consensus 349 ~~~~~~I~---HgG~~s~~eal~~GvP~l~~P~~~DQ~-~~a~~v~e~~g~G~~l~~~~~~~~~~~~~~~~~~t~~~l~~ 424 (476)
+++ +.. .+|.+|++|||+.|||+|++|-..=-- .-+..+ ...|+...+ .-+.++-.+
T Consensus 600 ~Di--~LDt~p~~g~tT~~eal~~GvPvvt~~g~~~~sR~~~s~l-~~~gl~e~i----------------a~~~~~Y~~ 660 (723)
T 4gyw_A 600 ADV--CLDTPLCNGHTTGMDVLWAGTPMVTMPGETLASRVAASQL-TCLGCLELI----------------AKNRQEYED 660 (723)
T ss_dssp CSE--EECCSSSCCSHHHHHHHHTTCCEEBCCCSSGGGTHHHHHH-HHHTCGGGB----------------CSSHHHHHH
T ss_pred CeE--EeCCCCcCCHHHHHHHHHcCCCEEEccCCCccHhHHHHHH-HHcCCcccc----------------cCCHHHHHH
Confidence 776 654 899999999999999999999532222 223344 466665433 235555444
Q ss_pred HHHHHhcCChhhHHHHHHHH
Q 039701 425 AINMLMDEGEERDERRRRAR 444 (476)
Q Consensus 425 ~i~~ll~~~~~~~~~r~~a~ 444 (476)
.-.++-+|+++...+|++.+
T Consensus 661 ~a~~la~d~~~l~~lr~~l~ 680 (723)
T 4gyw_A 661 IAVKLGTDLEYLKKVRGKVW 680 (723)
T ss_dssp HHHHHHHCHHHHHHHHHHHH
T ss_pred HHHHHhcCHHHHHHHHHHHH
Confidence 44455566755555555443
No 50
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=97.81 E-value=0.0087 Score=60.70 Aligned_cols=136 Identities=8% Similarity=-0.007 Sum_probs=76.9
Q ss_pred EEEecCCcccCCHHHHHHHHHHHHh---CCCCeEEEEcCCCCCchhHHH--HhcCCCeEeeccccHH---HhhhCCCcee
Q 039701 282 VYVCLGSLCDCSTRQLIELGLGLEA---TKKPFIWVIRPGDQAFEKFEE--RIEGRGLLIRGWAPQV---VILSHPAIGG 353 (476)
Q Consensus 282 v~vs~GS~~~~~~~~~~~i~~a~~~---~~~~~i~~~~~~~~~~~~~~~--~~~~~nv~~~~~vpq~---~ll~~~~~~~ 353 (476)
+++..|.... .+.+..+++|+.+ .+.++++...+.......+.. ...+.++.+....+.. .++..+++
T Consensus 329 ~i~~vgRl~~--~Kg~~~li~a~~~l~~~~~~l~l~G~G~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~aD~-- 404 (536)
T 3vue_A 329 LIAFIGRLEE--QKGPDVMAAAIPELMQEDVQIVLLGTGKKKFEKLLKSMEEKYPGKVRAVVKFNAPLAHLIMAGADV-- 404 (536)
T ss_dssp EEEEECCBSG--GGCHHHHHHHHHHHTTSSCEEEEECCBCHHHHHHHHHHHHHSTTTEEEECSCCHHHHHHHHHHCSE--
T ss_pred EEEEEeeccc--cCChHHHHHHHHHhHhhCCeEEEEeccCchHHHHHHHHHhhcCCceEEEEeccHHHHHHHHHhhhe--
Confidence 4455676643 4555666666654 455655554333211111111 1236788888887754 47888888
Q ss_pred eecc---cCh-hhHHHHHHcCCCEecccccccchhhHHHHHHhhcceEEeccCCCCCCcccccCCcccchhHHHHHHHHH
Q 039701 354 FLTH---CGW-NSVLEAVSNGLPMVTWPFFADQFCNEKLVVQVLRIGVTIGAERPPSLADEERNGVPVKKEDVKKAINML 429 (476)
Q Consensus 354 ~I~H---gG~-~s~~eal~~GvP~l~~P~~~DQ~~~a~~v~e~~g~G~~l~~~~~~~~~~~~~~~~~~t~~~l~~~i~~l 429 (476)
+|.= =|. .+++||+++|+|+|+... ......| +.-.-|.........-.-. ...+.++|.++|+++
T Consensus 405 ~v~PS~~E~fgl~~lEAma~G~PvI~s~~----gG~~e~V-~dg~~G~~~~~~~~~g~l~-----~~~d~~~la~ai~ra 474 (536)
T 3vue_A 405 LAVPSRFEPCGLIQLQGMRYGTPCACAST----GGLVDTV-IEGKTGFHMGRLSVDCKVV-----EPSDVKKVAATLKRA 474 (536)
T ss_dssp EEECCSCCSSCSHHHHHHHTTCCEEECSC----THHHHHC-CBTTTEEECCCCCSCTTCC-----CHHHHHHHHHHHHHH
T ss_pred eecccccCCCCHHHHHHHHcCCCEEEcCC----CCchhee-eCCCCccccccCCCceeEE-----CCCCHHHHHHHHHHH
Confidence 7642 233 488999999999998654 3445555 3444454332220000000 124678899999988
Q ss_pred hc
Q 039701 430 MD 431 (476)
Q Consensus 430 l~ 431 (476)
++
T Consensus 475 l~ 476 (536)
T 3vue_A 475 IK 476 (536)
T ss_dssp HH
T ss_pred HH
Confidence 75
No 51
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8
Probab=97.76 E-value=0.00044 Score=60.21 Aligned_cols=94 Identities=10% Similarity=0.078 Sum_probs=68.2
Q ss_pred CeEe-eccccHH---HhhhCCCceeeeccc---C-hhhHHHHHHcCCCEecccccccchhhHHHHHHhhcceEEeccCCC
Q 039701 333 GLLI-RGWAPQV---VILSHPAIGGFLTHC---G-WNSVLEAVSNGLPMVTWPFFADQFCNEKLVVQVLRIGVTIGAERP 404 (476)
Q Consensus 333 nv~~-~~~vpq~---~ll~~~~~~~~I~Hg---G-~~s~~eal~~GvP~l~~P~~~DQ~~~a~~v~e~~g~G~~l~~~~~ 404 (476)
+|.+ .+++++. .++..+++ +|.-. | ..++.||+++|+|+|+.... .+...+ ..+.|...+.
T Consensus 96 ~v~~~~g~~~~~~~~~~~~~ad~--~l~ps~~e~~~~~~~Ea~a~G~PvI~~~~~----~~~e~~--~~~~g~~~~~--- 164 (200)
T 2bfw_A 96 NVKVITEMLSREFVRELYGSVDF--VIIPSYFEPFGLVALEAMCLGAIPIASAVG----GLRDII--TNETGILVKA--- 164 (200)
T ss_dssp TEEEECSCCCHHHHHHHHTTCSE--EEECCSCCSSCHHHHHHHHTTCEEEEESCH----HHHHHC--CTTTCEEECT---
T ss_pred CEEEEeccCCHHHHHHHHHHCCE--EEECCCCCCccHHHHHHHHCCCCEEEeCCC----ChHHHc--CCCceEEecC---
Confidence 8999 9999844 58888888 77432 3 46889999999999987543 222222 3355666644
Q ss_pred CCCcccccCCcccchhHHHHHHHHHhc-CChhhHHHHHHHHHHHHH
Q 039701 405 PSLADEERNGVPVKKEDVKKAINMLMD-EGEERDERRRRAREYGET 449 (476)
Q Consensus 405 ~~~~~~~~~~~~~t~~~l~~~i~~ll~-~~~~~~~~r~~a~~l~~~ 449 (476)
-+.+++.++|.++++ |++..+++.+++++...+
T Consensus 165 ------------~~~~~l~~~i~~l~~~~~~~~~~~~~~a~~~~~~ 198 (200)
T 2bfw_A 165 ------------GDPGELANAILKALELSRSDLSKFRENCKKRAMS 198 (200)
T ss_dssp ------------TCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
T ss_pred ------------CCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHh
Confidence 378999999999999 987777777777765543
No 52
>3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A
Probab=97.71 E-value=0.00037 Score=70.67 Aligned_cols=148 Identities=15% Similarity=0.051 Sum_probs=96.8
Q ss_pred ceEEEecCCcccCCHHHHHHHHHHHHhCCCCeEEE--EcCCCCCchhHH-----HHhcCCCeEeeccccHHH---hhhCC
Q 039701 280 SAVYVCLGSLCDCSTRQLIELGLGLEATKKPFIWV--IRPGDQAFEKFE-----ERIEGRGLLIRGWAPQVV---ILSHP 349 (476)
Q Consensus 280 ~vv~vs~GS~~~~~~~~~~~i~~a~~~~~~~~i~~--~~~~~~~~~~~~-----~~~~~~nv~~~~~vpq~~---ll~~~ 349 (476)
.++|.+|++.....++.+....+.+++.+..++|. .+........+. ..+ .+.+.+.+.+|+.+ .+..+
T Consensus 441 ~v~Fg~fn~~~Ki~p~~l~~WarIL~~vP~s~L~l~~~g~~~g~~~~~~~~~~~~GI-~~Rv~F~g~~p~~e~la~y~~a 519 (631)
T 3q3e_A 441 VVNIGIASTTMKLNPYFLEALKAIRDRAKVKVHFHFALGQSNGITHPYVERFIKSYL-GDSATAHPHSPYHQYLRILHNC 519 (631)
T ss_dssp EEEEEEEECSTTCCHHHHHHHHHHHHHCSSEEEEEEEESSCCGGGHHHHHHHHHHHH-GGGEEEECCCCHHHHHHHHHTC
T ss_pred eEEEEECCccccCCHHHHHHHHHHHHhCCCcEEEEEecCCCchhhHHHHHHHHHcCC-CccEEEcCCCCHHHHHHHHhcC
Confidence 58899988887778888888888888888777774 342221111111 123 35788889998665 45788
Q ss_pred Cceeee---cccChhhHHHHHHcCCCEecccccccchhhH-HHHHHhhcceEEeccCCCCCCcccccCCcccchhHHHHH
Q 039701 350 AIGGFL---THCGWNSVLEAVSNGLPMVTWPFFADQFCNE-KLVVQVLRIGVTIGAERPPSLADEERNGVPVKKEDVKKA 425 (476)
Q Consensus 350 ~~~~~I---~HgG~~s~~eal~~GvP~l~~P~~~DQ~~~a-~~v~e~~g~G~~l~~~~~~~~~~~~~~~~~~t~~~l~~~ 425 (476)
++ ++ ..+|.+|++|||++|||+|+++-..=.-..+ ..+ ...|+...+-. -+.++..+.
T Consensus 520 DI--fLDpfpy~GgtTtlEALwmGVPVVTl~G~~~asRvgaSlL-~~~GLpE~LIA---------------~d~eeYv~~ 581 (631)
T 3q3e_A 520 DM--MVNPFPFGNTNGIIDMVTLGLVGVCKTGAEVHEHIDEGLF-KRLGLPEWLIA---------------NTVDEYVER 581 (631)
T ss_dssp SE--EECCSSSCCSHHHHHHHHTTCCEEEECCSSHHHHHHHHHH-HHTTCCGGGEE---------------SSHHHHHHH
T ss_pred cE--EEeCCcccCChHHHHHHHcCCCEEeccCCcHHHHhHHHHH-HhcCCCcceec---------------CCHHHHHHH
Confidence 87 64 3478899999999999999987532111222 223 24455432111 367888888
Q ss_pred HHHHhcCChhhHHHHHHHHHH
Q 039701 426 INMLMDEGEERDERRRRAREY 446 (476)
Q Consensus 426 i~~ll~~~~~~~~~r~~a~~l 446 (476)
..++.+|++....+|+++++-
T Consensus 582 Av~La~D~~~l~~LR~~Lr~~ 602 (631)
T 3q3e_A 582 AVRLAENHQERLELRRYIIEN 602 (631)
T ss_dssp HHHHHHCHHHHHHHHHHHHHS
T ss_pred HHHHhCCHHHHHHHHHHHHHH
Confidence 888888886666666665544
No 53
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=97.37 E-value=0.002 Score=61.66 Aligned_cols=104 Identities=13% Similarity=0.017 Sum_probs=69.7
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHHC--CCeEEEEeCCcchhhhhhHhhhcccCCCceE-EEEeeCCCcccCCCCCCC
Q 039701 8 QLHFILFPFLAQGHMIPMIDIARLLAQH--GALVTIVTTPMNAARFQNVIERGIQSGLRIQ-VIEFYFPCQEVGLPEGCE 84 (476)
Q Consensus 8 ~~~vl~~~~p~~GHv~P~l~La~~L~~r--GH~Vt~~~~~~~~~~~~~~~~~~~~~g~~i~-~~~i~~~~~~~~~~~~~~ 84 (476)
..||+++-....|++.=+..+.+.|+++ +.+|++++.+.+.+.++.. +.+. ++.++..
T Consensus 8 ~~~iLvi~~~~lGD~i~~~P~l~~L~~~~P~a~I~~l~~~~~~~l~~~~--------p~vd~vi~~~~~----------- 68 (349)
T 3tov_A 8 YKRIVVTFLMHLGDVILTTPFLEVLRKAAPHSHITYVIDEKLQQVMEYN--------PNIDELIVVDKK----------- 68 (349)
T ss_dssp TCEEEEECCCCHHHHHTTHHHHHHHHHHCTTSEEEEEEEGGGGGGTSSC--------TTCSEEEEECCS-----------
T ss_pred CCEEEEEecCcccHHHHHHHHHHHHHHHCCCCEEEEEECcchhHHHhcC--------CCccEEEEeCcc-----------
Confidence 5699999999999999999999999988 9999999998666655443 2343 3333210
Q ss_pred CCCCCCCcCcHHHHHHHHHHchHHHHHHHHhcCCCC-eEEEecCCCchhHHHHhHcCCCcEE
Q 039701 85 SWDKLPSMALLPKFFAAIEMLRLPLETLFKEIQPKP-GCLISDVCLPWTVSSACKFNVPRIV 145 (476)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~-D~vI~D~~~~~~~~~A~~~giP~v~ 145 (476)
.....+. ... .+...+++ .++ |++|.=....-...++...|+|..+
T Consensus 69 --------~~~~~~~----~~~-~l~~~Lr~--~~y~D~vidl~~~~rs~~l~~~~~a~~ri 115 (349)
T 3tov_A 69 --------GRHNSIS----GLN-EVAREINA--KGKTDIVINLHPNERTSYLAWKIHAPITT 115 (349)
T ss_dssp --------SHHHHHH----HHH-HHHHHHHH--HCCCCEEEECCCSHHHHHHHHHHCCSEEE
T ss_pred --------cccccHH----HHH-HHHHHHhh--CCCCeEEEECCCChHHHHHHHHhCCCeEE
Confidence 1011111 111 22333444 589 9999655555567788889999765
No 54
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=97.01 E-value=0.038 Score=52.42 Aligned_cols=93 Identities=14% Similarity=0.093 Sum_probs=59.3
Q ss_pred CCceEEEecCCcc-c---CCHHHHHHHHHHHHhCCCCeEEEEcCCCCCchhHHHHhc---C----CCe-Eeecccc---H
Q 039701 278 PGSAVYVCLGSLC-D---CSTRQLIELGLGLEATKKPFIWVIRPGDQAFEKFEERIE---G----RGL-LIRGWAP---Q 342 (476)
Q Consensus 278 ~~~vv~vs~GS~~-~---~~~~~~~~i~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~---~----~nv-~~~~~vp---q 342 (476)
++++|.+.-||.. . .+.+.+.++++.+.+.+.++++..++.+ . ...+.+. + .++ .+.+..+ .
T Consensus 179 ~~~~i~l~pga~~~~~k~wp~~~~~~l~~~L~~~~~~vvl~g~~~e--~-~~~~~i~~~~~~~~~~~~~~l~g~~sl~e~ 255 (348)
T 1psw_A 179 ERPMIGFCPGAEFGPAKRWPHYHYAELAKQLIDEGYQVVLFGSAKD--H-EAGNEILAALNTEQQAWCRNLAGETQLDQA 255 (348)
T ss_dssp SSCEEEEECCCTTCGGGSCCHHHHHHHHHHHHHTTCEEEECCCGGG--H-HHHHHHHTTSCHHHHTTEEECTTTSCHHHH
T ss_pred CCcEEEEECCCCccccCCCCHHHHHHHHHHHHHCCCeEEEEeChhh--H-HHHHHHHHhhhhccccceEeccCcCCHHHH
Confidence 4557888888832 2 5578888888888777888776533222 1 1111121 1 233 3334332 3
Q ss_pred HHhhhCCCceeeecccChhhHHHHHHcCCCEecc
Q 039701 343 VVILSHPAIGGFLTHCGWNSVLEAVSNGLPMVTW 376 (476)
Q Consensus 343 ~~ll~~~~~~~~I~HgG~~s~~eal~~GvP~l~~ 376 (476)
.+++.++++ +|+.- .|+++-|.+.|+|+|++
T Consensus 256 ~ali~~a~l--~I~~D-sg~~HlAaa~g~P~v~l 286 (348)
T 1psw_A 256 VILIAACKA--IVTND-SGLMHVAAALNRPLVAL 286 (348)
T ss_dssp HHHHHTSSE--EEEES-SHHHHHHHHTTCCEEEE
T ss_pred HHHHHhCCE--EEecC-CHHHHHHHHcCCCEEEE
Confidence 469999999 99973 45677799999999987
No 55
>3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A*
Probab=96.98 E-value=0.002 Score=61.23 Aligned_cols=110 Identities=12% Similarity=0.150 Sum_probs=78.8
Q ss_pred CeEeeccccHHHh---hhCCCceeeecccCh---------hhHHHHHHcCCCEecccccccchhhHHHHHHhhcceEEec
Q 039701 333 GLLIRGWAPQVVI---LSHPAIGGFLTHCGW---------NSVLEAVSNGLPMVTWPFFADQFCNEKLVVQVLRIGVTIG 400 (476)
Q Consensus 333 nv~~~~~vpq~~l---l~~~~~~~~I~HgG~---------~s~~eal~~GvP~l~~P~~~DQ~~~a~~v~e~~g~G~~l~ 400 (476)
||.+.+|+|+.++ |+.++.+.+.+-+.. +-+.|++++|+|+|+.+ ...++..+ ++.++|...
T Consensus 215 nV~f~G~~~~~el~~~l~~~~~~lv~~~~~~~~y~~~~~P~Kl~eymA~G~PVI~~~----~~~~~~~v-~~~~~G~~~- 288 (339)
T 3rhz_A 215 NVHKINYRPDEQLLMEMSQGGFGLVWMDDKDKEYQSLYCSYKLGSFLAAGIPVIVQE----GIANQELI-ENNGLGWIV- 288 (339)
T ss_dssp TEEEEECCCHHHHHHHHHTEEEEECCCCGGGHHHHTTCCCHHHHHHHHHTCCEEEET----TCTTTHHH-HHHTCEEEE-
T ss_pred CEEEeCCCCHHHHHHHHHhCCEEEEECCCchhHHHHhcChHHHHHHHHcCCCEEEcc----ChhHHHHH-HhCCeEEEe-
Confidence 9999999998765 444555445433322 35789999999999754 56778888 699999876
Q ss_pred cCCCCCCcccccCCcccchhHHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHH
Q 039701 401 AERPPSLADEERNGVPVKKEDVKKAINMLMDEGEERDERRRRAREYGETAKTAIEEGGSSYLNIKLLIKD 470 (476)
Q Consensus 401 ~~~~~~~~~~~~~~~~~t~~~l~~~i~~ll~~~~~~~~~r~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~ 470 (476)
. +.+++.++|..+. +++.++|++|+++.++++++ |..+.+.+.+.+..
T Consensus 289 -~---------------~~~e~~~~i~~l~--~~~~~~m~~na~~~a~~~~~----~~f~k~~l~~~~~~ 336 (339)
T 3rhz_A 289 -K---------------DVEEAIMKVKNVN--EDEYIELVKNVRSFNPILRK----GFFTRRLLTESVFQ 336 (339)
T ss_dssp -S---------------SHHHHHHHHHHCC--HHHHHHHHHHHHHHTHHHHT----THHHHHHHHHHHHH
T ss_pred -C---------------CHHHHHHHHHHhC--HHHHHHHHHHHHHHHHHhhc----cHHHHHHHHHHHHH
Confidence 2 2478888888864 45678999999999888764 44455555554433
No 56
>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A*
Probab=94.76 E-value=0.89 Score=42.37 Aligned_cols=136 Identities=13% Similarity=-0.032 Sum_probs=75.9
Q ss_pred CceEEEecCCccc---CCHHHHHHHHHHHHhCCCCeEEEEcCCCCCchhHHHHhc--CCCeEeecc--cc-HHHhhhCCC
Q 039701 279 GSAVYVCLGSLCD---CSTRQLIELGLGLEATKKPFIWVIRPGDQAFEKFEERIE--GRGLLIRGW--AP-QVVILSHPA 350 (476)
Q Consensus 279 ~~vv~vs~GS~~~---~~~~~~~~i~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~--~~nv~~~~~--vp-q~~ll~~~~ 350 (476)
++.|.+.-|+... .+.+.+.++++.+.+.+.++++..++... ....+.+. -+++.+.+. +. -.+++.+++
T Consensus 178 ~~~i~l~pga~~~~k~wp~~~~~~l~~~L~~~~~~vvl~~g~~~e--~~~~~~i~~~~~~~~l~g~~sl~el~ali~~a~ 255 (326)
T 2gt1_A 178 GEYAVFLHATTRDDKHWPEEHWRELIGLLADSGIRIKLPWGAPHE--EERAKRLAEGFAYVEVLPKMSLEGVARVLAGAK 255 (326)
T ss_dssp TSEEEEECCCSSGGGSCCHHHHHHHHHHTTTTCCEEEECCSSHHH--HHHHHHHHTTCTTEEECCCCCHHHHHHHHHTCS
T ss_pred CCEEEEEeCCCCccccCCHHHHHHHHHHHHHCCCcEEEecCCHHH--HHHHHHHHhhCCcccccCCCCHHHHHHHHHhCC
Confidence 4577777777643 45788888888887667777665443221 01112121 124444343 23 346999999
Q ss_pred ceeeecc-cChhhHHHHHHcCCCEecccccccchhhHHHHHHhhcceE-EeccCCCCCCcccccCCcccchhHHHHHHHH
Q 039701 351 IGGFLTH-CGWNSVLEAVSNGLPMVTWPFFADQFCNEKLVVQVLRIGV-TIGAERPPSLADEERNGVPVKKEDVKKAINM 428 (476)
Q Consensus 351 ~~~~I~H-gG~~s~~eal~~GvP~l~~P~~~DQ~~~a~~v~e~~g~G~-~l~~~~~~~~~~~~~~~~~~t~~~l~~~i~~ 428 (476)
+ +|+. .|. ++=|.+.|+|+|++=-..|- .+.. =+|-.. .+... . .-=..++++++.+++.+
T Consensus 256 l--~I~~DSG~--~HlAaa~g~P~v~lfg~t~p----~~~~-P~~~~~~~~~~~----~----~cm~~I~~~~V~~~i~~ 318 (326)
T 2gt1_A 256 F--VVSVDTGL--SHLTAALDRPNITVYGPTDP----GLIG-GYGKNQMVCRAP----G----NELSQLTANAVKQFIEE 318 (326)
T ss_dssp E--EEEESSHH--HHHHHHTTCCEEEEESSSCH----HHHC-CCSSSEEEEECG----G----GCGGGCCHHHHHHHHHH
T ss_pred E--EEecCCcH--HHHHHHcCCCEEEEECCCCh----hhcC-CCCCCceEecCC----c----ccccCCCHHHHHHHHHH
Confidence 9 9998 554 44466799999998111111 1110 111111 11000 0 00026899999999999
Q ss_pred HhcCC
Q 039701 429 LMDEG 433 (476)
Q Consensus 429 ll~~~ 433 (476)
+|++.
T Consensus 319 ~l~~~ 323 (326)
T 2gt1_A 319 NAEKA 323 (326)
T ss_dssp TTTTC
T ss_pred HHHHh
Confidence 99753
No 57
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=94.64 E-value=0.033 Score=54.42 Aligned_cols=81 Identities=19% Similarity=0.098 Sum_probs=57.9
Q ss_pred CCCeEeeccccHH---HhhhCCCceeeeccc---Ch-hhHHHHHHcCCCEecccccccchhhHHHHHHhhcceEEeccCC
Q 039701 331 GRGLLIRGWAPQV---VILSHPAIGGFLTHC---GW-NSVLEAVSNGLPMVTWPFFADQFCNEKLVVQVLRIGVTIGAER 403 (476)
Q Consensus 331 ~~nv~~~~~vpq~---~ll~~~~~~~~I~Hg---G~-~s~~eal~~GvP~l~~P~~~DQ~~~a~~v~e~~g~G~~l~~~~ 403 (476)
..+|.+.+++|+. .++..+++ +|.-. |. +++.||+++|+|+|+ -..+ ....+ +.-..|..++..
T Consensus 294 ~~~v~f~G~~~~~~l~~~~~~adv--~v~pS~~E~~g~~~lEAmA~G~PVV~-~~~g----~~e~v-~~~~~G~lv~~~- 364 (413)
T 2x0d_A 294 GIHLNSLGKLTLEDYADLLKRSSI--GISLMISPHPSYPPLEMAHFGLRVIT-NKYE----NKDLS-NWHSNIVSLEQL- 364 (413)
T ss_dssp TEEEEEEESCCHHHHHHHHHHCCE--EECCCSSSSCCSHHHHHHHTTCEEEE-ECBT----TBCGG-GTBTTEEEESSC-
T ss_pred cCcEEEcCCCCHHHHHHHHHhCCE--EEEecCCCCCCcHHHHHHhCCCcEEE-eCCC----cchhh-hcCCCEEEeCCC-
Confidence 4589999999865 47888998 76422 33 568999999999998 2221 12334 343457666543
Q ss_pred CCCCcccccCCcccchhHHHHHHHHHhcCCh
Q 039701 404 PPSLADEERNGVPVKKEDVKKAINMLMDEGE 434 (476)
Q Consensus 404 ~~~~~~~~~~~~~~t~~~l~~~i~~ll~~~~ 434 (476)
++++|+++|.++++|++
T Consensus 365 --------------d~~~la~ai~~ll~~~~ 381 (413)
T 2x0d_A 365 --------------NPENIAETLVELCMSFN 381 (413)
T ss_dssp --------------SHHHHHHHHHHHHHHTC
T ss_pred --------------CHHHHHHHHHHHHcCHH
Confidence 78999999999999874
No 58
>1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A*
Probab=88.95 E-value=1.6 Score=43.27 Aligned_cols=108 Identities=17% Similarity=0.144 Sum_probs=65.7
Q ss_pred eE-eeccccHH---HhhhCCCceeeec---ccChh-hHHHHHHcCC-----CEecccccccchhhHHHHHHhhcceEEec
Q 039701 334 LL-IRGWAPQV---VILSHPAIGGFLT---HCGWN-SVLEAVSNGL-----PMVTWPFFADQFCNEKLVVQVLRIGVTIG 400 (476)
Q Consensus 334 v~-~~~~vpq~---~ll~~~~~~~~I~---HgG~~-s~~eal~~Gv-----P~l~~P~~~DQ~~~a~~v~e~~g~G~~l~ 400 (476)
+. +.+++++. .++..+++ ||. .=|.| +..||+++|+ |+|+.-+.+- +. ...-|..++
T Consensus 333 v~~~~g~v~~~el~~ly~~ADv--~v~pS~~EGfgLv~lEAmA~g~~~~~gpvV~S~~~G~----~~----~l~~g~lv~ 402 (482)
T 1uqt_A 333 LYYLNQHFDRKLLMKIFRYSDV--GLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGA----AN----ELTSALIVN 402 (482)
T ss_dssp EEEECSCCCHHHHHHHHHHCSE--EEECCSSBSCCHHHHHHHHHSCTTSCCEEEEETTBGG----GG----TCTTSEEEC
T ss_pred EEEeCCCCCHHHHHHHHHHccE--EEECCCcccCCchHHHHHHhCCCCCCCCEEEECCCCC----HH----HhCCeEEEC
Confidence 44 46788866 47788888 664 34665 7889999998 5655443221 11 112366665
Q ss_pred cCCCCCCcccccCCcccchhHHHHHHHHHhcCC-hhhHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHh
Q 039701 401 AERPPSLADEERNGVPVKKEDVKKAINMLMDEG-EERDERRRRAREYGETAKTAIEEGGSSYLNIKLLIKDILQQ 474 (476)
Q Consensus 401 ~~~~~~~~~~~~~~~~~t~~~l~~~i~~ll~~~-~~~~~~r~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~i~~~ 474 (476)
+. +.++++++|.++|+++ ++++.+.+++++ ..+ + -+...-.+.+++.+++.
T Consensus 403 p~---------------d~~~lA~ai~~lL~~~~~~r~~~~~~~~~---~v~----~-~s~~~~a~~~l~~l~~~ 454 (482)
T 1uqt_A 403 PY---------------DRDEVAAALDRALTMSLAERISRHAEMLD---VIV----K-NDINHWQECFISDLKQI 454 (482)
T ss_dssp TT---------------CHHHHHHHHHHHHTCCHHHHHHHHHHHHH---HHH----H-TCHHHHHHHHHHHHHHS
T ss_pred CC---------------CHHHHHHHHHHHHcCCHHHHHHHHHHHHH---HHH----h-CCHHHHHHHHHHHHHhc
Confidence 54 7899999999999864 222233322222 222 1 34557777888777654
No 59
>3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A*
Probab=88.35 E-value=1.5 Score=45.05 Aligned_cols=98 Identities=11% Similarity=0.113 Sum_probs=56.1
Q ss_pred eEeeccccH---------HHhhhCCCceeeecc---cCh-hhHHHHHHcCCCEecccccccchhhHHHHHH------hhc
Q 039701 334 LLIRGWAPQ---------VVILSHPAIGGFLTH---CGW-NSVLEAVSNGLPMVTWPFFADQFCNEKLVVQ------VLR 394 (476)
Q Consensus 334 v~~~~~vpq---------~~ll~~~~~~~~I~H---gG~-~s~~eal~~GvP~l~~P~~~DQ~~~a~~v~e------~~g 394 (476)
+++-.|++. .+++..+++ ||.= =|+ .+.+||+++|+|+|+.-..+ ....+.+ .-+
T Consensus 495 If~P~~L~~~d~lf~~d~~~~~~~adv--fV~PS~~EgfGl~~LEAmA~G~PvI~s~~gG----~~d~V~dg~~~~~~~~ 568 (725)
T 3nb0_A 495 IFHPEFLNANNPILGLDYDEFVRGCHL--GVFPSYYEPWGYTPAECTVMGVPSITTNVSG----FGSYMEDLIETNQAKD 568 (725)
T ss_dssp EECCSCCCTTCSSSCCCHHHHHHHCSE--EECCCSSBSSCHHHHHHHHTTCCEEEETTBH----HHHHHHTTSCHHHHHH
T ss_pred EEeccccCCCCccchhHHHHHHhhceE--EEeccccCCCCHHHHHHHHcCCCEEEeCCCC----hhhhhhccccccCCCC
Confidence 334457765 468888998 7643 344 48899999999999865532 2222211 113
Q ss_pred ceEEeccCCCCCCcccccCCcccch----hHHHHHHHHHhc-CChhhHHHHHHHHHHHHH
Q 039701 395 IGVTIGAERPPSLADEERNGVPVKK----EDVKKAINMLMD-EGEERDERRRRAREYGET 449 (476)
Q Consensus 395 ~G~~l~~~~~~~~~~~~~~~~~~t~----~~l~~~i~~ll~-~~~~~~~~r~~a~~l~~~ 449 (476)
.|..+...+ ..+. +.|++++..++. +++.+..++++++++++.
T Consensus 569 tG~lV~~rd------------~~d~ee~aeaLa~aL~~f~~~d~~~r~~mr~~ar~~A~~ 616 (725)
T 3nb0_A 569 YGIYIVDRR------------FKAPDESVEQLVDYMEEFVKKTRRQRINQRNATEALSDL 616 (725)
T ss_dssp TTEEEECCS------------SSCHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHGGGG
T ss_pred ceEEEeCCC------------CCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHh
Confidence 465553321 2344 445555555543 344456677777666544
No 60
>3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A*
Probab=86.74 E-value=10 Score=37.56 Aligned_cols=109 Identities=12% Similarity=0.063 Sum_probs=70.5
Q ss_pred CeEeeccccHH---HhhhCCCceeeec---ccChhh-HHHHHHcC---CCEecccccccchhhHHHHHHhhc-ceEEecc
Q 039701 333 GLLIRGWAPQV---VILSHPAIGGFLT---HCGWNS-VLEAVSNG---LPMVTWPFFADQFCNEKLVVQVLR-IGVTIGA 401 (476)
Q Consensus 333 nv~~~~~vpq~---~ll~~~~~~~~I~---HgG~~s-~~eal~~G---vP~l~~P~~~DQ~~~a~~v~e~~g-~G~~l~~ 401 (476)
.|.+.+.+|+. .++..+++ ++. .=|+|- ..|++++| .|.|+--+.+ .+. .+| -|..+++
T Consensus 353 ~V~f~g~v~~~el~aly~~ADv--~vv~SlrEGfgLv~~EamA~~~~~g~lVlSe~aG----a~~----~l~~~allVnP 422 (496)
T 3t5t_A 353 TVRIDNDNDVNHTIACFRRADL--LIFNSTVDGQNLSTFEAPLVNERDADVILSETCG----AAE----VLGEYCRSVNP 422 (496)
T ss_dssp SEEEEECCCHHHHHHHHHHCSE--EEECCSSBSCCSHHHHHHHHCSSCCEEEEETTBT----THH----HHGGGSEEECT
T ss_pred CEEEeCCCCHHHHHHHHHhccE--EEECcccccCChhHHHHHHhCCCCCCEEEeCCCC----CHH----HhCCCEEEECC
Confidence 57777888864 57777888 553 458875 57999996 5555433322 222 333 4677765
Q ss_pred CCCCCCcccccCCcccchhHHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHH
Q 039701 402 ERPPSLADEERNGVPVKKEDVKKAINMLMDEGEERDERRRRAREYGETAKTAIEEGGSSYLNIKLLIKDILQ 473 (476)
Q Consensus 402 ~~~~~~~~~~~~~~~~t~~~l~~~i~~ll~~~~~~~~~r~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~i~~ 473 (476)
. +.++++++|.++|++++ ++-+++.+++.+..+ ..+...-.++|+++|..
T Consensus 423 ~---------------D~~~lA~AI~~aL~m~~--~er~~r~~~~~~~V~-----~~d~~~W~~~fl~~L~~ 472 (496)
T 3t5t_A 423 F---------------DLVEQAEAISAALAAGP--RQRAEAAARRRDAAR-----PWTLEAWVQAQLDGLAA 472 (496)
T ss_dssp T---------------BHHHHHHHHHHHHHCCH--HHHHHHHHHHHHHHT-----TCBHHHHHHHHHHHHHH
T ss_pred C---------------CHHHHHHHHHHHHcCCH--HHHHHHHHHHHHHHH-----HCCHHHHHHHHHHHHhh
Confidence 4 88999999999998662 233344444444443 45666778888888764
No 61
>1g5t_A COB(I)alamin adenosyltransferase; P-loop protein, cobalamin biosynthesis, RECA fold; HET: ATP; 1.80A {Salmonella typhimurium} SCOP: c.37.1.11 PDB: 1g5r_A* 1g64_A*
Probab=80.12 E-value=20 Score=30.43 Aligned_cols=37 Identities=22% Similarity=0.200 Sum_probs=33.4
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHHCCCeEEEEeC
Q 039701 8 QLHFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTT 44 (476)
Q Consensus 8 ~~~vl~~~~p~~GHv~P~l~La~~L~~rGH~Vt~~~~ 44 (476)
+-.|++++-++.|-..-.+.+|-+.+.+|++|.|+..
T Consensus 28 ~g~i~v~tG~GkGKTTaA~GlalRA~g~G~rV~~vQF 64 (196)
T 1g5t_A 28 RGIIIVFTGNGKGKTTAAFGTAARAVGHGKNVGVVQF 64 (196)
T ss_dssp CCCEEEEESSSSCHHHHHHHHHHHHHHTTCCEEEEES
T ss_pred CceEEEECCCCCCHHHHHHHHHHHHHHCCCeEEEEEe
Confidence 4578888888999999999999999999999999954
No 62
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=78.92 E-value=2.9 Score=34.48 Aligned_cols=46 Identities=15% Similarity=0.097 Sum_probs=38.5
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHHCCCeEEEEeCCcchhhhhh
Q 039701 8 QLHFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTTPMNAARFQN 53 (476)
Q Consensus 8 ~~~vl~~~~p~~GHv~P~l~La~~L~~rGH~Vt~~~~~~~~~~~~~ 53 (476)
+++|++.+.++..|-....-++..|..+|++|.+.......+.+.+
T Consensus 18 ~~~vlla~~~gd~HdiG~~~va~~l~~~G~eVi~lG~~~p~e~lv~ 63 (161)
T 2yxb_A 18 RYKVLVAKMGLDGHDRGAKVVARALRDAGFEVVYTGLRQTPEQVAM 63 (161)
T ss_dssp SCEEEEEEESSSSCCHHHHHHHHHHHHTTCEEECCCSBCCHHHHHH
T ss_pred CCEEEEEeCCCCccHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHH
Confidence 7899999999999999999999999999999999865433333333
No 63
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=78.81 E-value=0.85 Score=44.27 Aligned_cols=39 Identities=10% Similarity=0.048 Sum_probs=31.0
Q ss_pred CcEEEEEcCCCc-----cChHHHHHHHHHHHHCCCeEEEEeCCc
Q 039701 8 QLHFILFPFLAQ-----GHMIPMIDIARLLAQHGALVTIVTTPM 46 (476)
Q Consensus 8 ~~~vl~~~~p~~-----GHv~P~l~La~~L~~rGH~Vt~~~~~~ 46 (476)
++||++++.... |=......||++|+++||+|++++...
T Consensus 46 ~mrI~~v~~~~~p~~~~GG~~~v~~la~~L~~~GheV~Vvt~~~ 89 (413)
T 2x0d_A 46 GKRLNLLVPSINQEHMFGGISTALKLFEQFDNKKFKKRIILTDA 89 (413)
T ss_dssp SCEEEEEESCCCGGGCSHHHHHHHHHHTTSCTTTCEEEEEESSC
T ss_pred CceEEEEeCCCCccccccHHHHHHHHHHHHHHcCCceEEEEecC
Confidence 689999885522 333568899999999999999999753
No 64
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=78.40 E-value=3.8 Score=32.70 Aligned_cols=44 Identities=11% Similarity=0.031 Sum_probs=37.1
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHHCCCeEEEEeCCcchhhh
Q 039701 8 QLHFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTTPMNAARF 51 (476)
Q Consensus 8 ~~~vl~~~~p~~GHv~P~l~La~~L~~rGH~Vt~~~~~~~~~~~ 51 (476)
+++|++.+.++.+|-....-++..|..+|++|..+......+.+
T Consensus 3 ~~~vvla~~~~d~HdiG~~~v~~~l~~~G~~Vi~lG~~~p~e~~ 46 (137)
T 1ccw_A 3 KKTIVLGVIGSDCHAVGNKILDHAFTNAGFNVVNIGVLSPQELF 46 (137)
T ss_dssp CCEEEEEEETTCCCCHHHHHHHHHHHHTTCEEEEEEEEECHHHH
T ss_pred CCEEEEEeCCCchhHHHHHHHHHHHHHCCCEEEECCCCCCHHHH
Confidence 57999999999999999999999999999999987654333333
No 65
>3zqu_A Probable aromatic acid decarboxylase; lyase; HET: FNR; 1.50A {Pseudomonas aeruginosa} SCOP: c.34.1.0
Probab=76.74 E-value=3.2 Score=35.79 Aligned_cols=44 Identities=14% Similarity=0.021 Sum_probs=37.2
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHHCCCeEEEEeCCcchhhhh
Q 039701 8 QLHFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTTPMNAARFQ 52 (476)
Q Consensus 8 ~~~vl~~~~p~~GHv~P~l~La~~L~~rGH~Vt~~~~~~~~~~~~ 52 (476)
+.||++.-.|+.|-+. ...|.+.|.++|++|.++.++.....+.
T Consensus 4 ~k~IllgvTGaiaa~k-~~~ll~~L~~~g~eV~vv~T~~A~~fi~ 47 (209)
T 3zqu_A 4 PERITLAMTGASGAQY-GLRLLDCLVQEEREVHFLISKAAQLVMA 47 (209)
T ss_dssp CSEEEEEECSSSCHHH-HHHHHHHHHHTTCEEEEEECHHHHHHHH
T ss_pred CCEEEEEEECHHHHHH-HHHHHHHHHHCCCEEEEEECccHHHHHH
Confidence 5689999999988888 8899999999999999999885544443
No 66
>2ywr_A Phosphoribosylglycinamide formyltransferase; rossmann fold, structural genomics, NPPSFA; 1.77A {Aquifex aeolicus}
Probab=76.67 E-value=36 Score=29.31 Aligned_cols=106 Identities=8% Similarity=-0.015 Sum_probs=58.6
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHHCCC--eEEEEeC-CcchhhhhhHhhhcccCCCceEEEEeeCCCcccCCCCCCCC
Q 039701 9 LHFILFPFLAQGHMIPMIDIARLLAQHGA--LVTIVTT-PMNAARFQNVIERGIQSGLRIQVIEFYFPCQEVGLPEGCES 85 (476)
Q Consensus 9 ~~vl~~~~p~~GHv~P~l~La~~L~~rGH--~Vt~~~~-~~~~~~~~~~~~~~~~~g~~i~~~~i~~~~~~~~~~~~~~~ 85 (476)
+||+|+.+++.. -+..+.+.|.+.+| +|..+.+ +......+.+ +. .++.+..++. ....
T Consensus 2 ~rI~vl~SG~g~---~~~~~l~~l~~~~~~~~i~~Vvs~~~~~~~~~~A-~~-----~gIp~~~~~~--------~~~~- 63 (216)
T 2ywr_A 2 LKIGVLVSGRGS---NLQAIIDAIESGKVNASIELVISDNPKAYAIERC-KK-----HNVECKVIQR--------KEFP- 63 (216)
T ss_dssp EEEEEEECSCCH---HHHHHHHHHHTTSSCEEEEEEEESCTTCHHHHHH-HH-----HTCCEEECCG--------GGSS-
T ss_pred CEEEEEEeCCcH---HHHHHHHHHHhCCCCCeEEEEEeCCCChHHHHHH-HH-----cCCCEEEeCc--------cccc-
Confidence 479998777653 36677778888888 7765544 3332222222 11 1455554320 0000
Q ss_pred CCCCCCcCcHHHHHHHHHHchHHHHHHHHhcCCCCeEEEecCCC-chhHHHHhHcCCCcEEEecc
Q 039701 86 WDKLPSMALLPKFFAAIEMLRLPLETLFKEIQPKPGCLISDVCL-PWTVSSACKFNVPRIVFHGF 149 (476)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~D~vI~D~~~-~~~~~~A~~~giP~v~~~~~ 149 (476)
+ .....+.+.+.+++ .++|+||+-.+. .-...+-..+...++-++++
T Consensus 64 -------~--------r~~~~~~~~~~l~~--~~~Dliv~a~y~~il~~~~l~~~~~~~iNiHpS 111 (216)
T 2ywr_A 64 -------S--------KKEFEERMALELKK--KGVELVVLAGFMRILSHNFLKYFPNKVINIHPS 111 (216)
T ss_dssp -------S--------HHHHHHHHHHHHHH--TTCCEEEESSCCSCCCHHHHTTSTTCEEEEESS
T ss_pred -------c--------hhhhhHHHHHHHHh--cCCCEEEEeCchhhCCHHHHhhccCCeEEEcCC
Confidence 0 11122345667777 899999987654 44556666666667765443
No 67
>3q0i_A Methionyl-tRNA formyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; 1.89A {Vibrio cholerae}
Probab=76.17 E-value=32 Score=31.67 Aligned_cols=37 Identities=11% Similarity=-0.027 Sum_probs=24.9
Q ss_pred CCCCCCcEEEEEcCCCccChHHHHHHHHHHHHCCCeEEEEeCC
Q 039701 3 SQAGSQLHFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTTP 45 (476)
Q Consensus 3 ~~~~~~~~vl~~~~p~~GHv~P~l~La~~L~~rGH~Vt~~~~~ 45 (476)
+|++ ++||+|+-.|.. .+..-+.|.++||+|..+.+.
T Consensus 3 ~m~~-~mrivf~Gt~~f-----a~~~L~~L~~~~~~v~~Vvt~ 39 (318)
T 3q0i_A 3 AMSQ-SLRIVFAGTPDF-----AARHLAALLSSEHEIIAVYTQ 39 (318)
T ss_dssp -----CCEEEEECCSHH-----HHHHHHHHHTSSSEEEEEECC
T ss_pred cccc-CCEEEEEecCHH-----HHHHHHHHHHCCCcEEEEEcC
Confidence 4455 899999987633 345567788889999877664
No 68
>1kjn_A MTH0777; hypotethical protein, structural genomics, PSI, protein structure initiative; 2.20A {Methanothermobacterthermautotrophicus} SCOP: c.115.1.1
Probab=75.79 E-value=3 Score=33.33 Aligned_cols=46 Identities=15% Similarity=0.103 Sum_probs=32.3
Q ss_pred cEEEE-EcCC-CccChHHHHHHHHHHHHCCCeEEEEeCCcchhhhhhH
Q 039701 9 LHFIL-FPFL-AQGHMIPMIDIARLLAQHGALVTIVTTPMNAARFQNV 54 (476)
Q Consensus 9 ~~vl~-~~~p-~~GHv~P~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~ 54 (476)
+++++ +-.| ..-.+--.+=|...|.++||+|++++++.....++-+
T Consensus 7 m~~LilLGCPE~Pvq~p~~lYl~~~Lk~~G~~v~VA~npAAlkLleva 54 (157)
T 1kjn_A 7 GKALMVLGCPESPVQIPLAIYTSHKLKKKGFRVTVTANPAALRLVQVA 54 (157)
T ss_dssp CEEEEECCCSCSTTHHHHHHHHHHHHHHTTCEEEEEECHHHHHHHHHH
T ss_pred eeeeEEecCCCCcchhhHHHHHHHHHHhcCCeeEEecCHHHHhheecc
Confidence 44443 4445 5566666788999999999999999999554444433
No 69
>1y80_A Predicted cobalamin binding protein; corrinoid, factor IIIM, methyl transferase, structural genomics, PSI, protein structure initiative; HET: B1M; 1.70A {Moorella thermoacetica}
Probab=73.98 E-value=6 Score=34.08 Aligned_cols=48 Identities=17% Similarity=0.124 Sum_probs=40.4
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHHCCCeEEEEeCCcchhhhhhHh
Q 039701 8 QLHFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTTPMNAARFQNVI 55 (476)
Q Consensus 8 ~~~vl~~~~p~~GHv~P~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~ 55 (476)
+.+|++.+.++..|-....-++..|..+|++|.++...-..+.+....
T Consensus 88 ~~~vll~~~~gd~H~iG~~~va~~l~~~G~~v~~LG~~vp~~~l~~~~ 135 (210)
T 1y80_A 88 VGKIVLGTVKGDLHDIGKNLVAMMLESGGFTVYNLGVDIEPGKFVEAV 135 (210)
T ss_dssp CCEEEEEEBTTCCCCHHHHHHHHHHHHTTCEEEECCSSBCHHHHHHHH
T ss_pred CCEEEEEeCCCcccHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHH
Confidence 569999999999999999999999999999999987755444444443
No 70
>1mvl_A PPC decarboxylase athal3A; flavoprotein, active site mutant C175S; HET: FMN; 2.00A {Arabidopsis thaliana} SCOP: c.34.1.1 PDB: 1mvn_A* 1e20_A*
Probab=73.83 E-value=4.2 Score=35.08 Aligned_cols=42 Identities=10% Similarity=0.035 Sum_probs=35.6
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHHCCCeEEEEeCCcchhhh
Q 039701 8 QLHFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTTPMNAARF 51 (476)
Q Consensus 8 ~~~vl~~~~p~~GHv~P~l~La~~L~~rGH~Vt~~~~~~~~~~~ 51 (476)
+.||++...++.+-+. ...|.+.|.++| +|.++.++.....+
T Consensus 19 ~k~IllgvTGsiaa~k-~~~ll~~L~~~g-~V~vv~T~~A~~fv 60 (209)
T 1mvl_A 19 KPRVLLAASGSVAAIK-FGNLCHCFTEWA-EVRAVVTKSSLHFL 60 (209)
T ss_dssp CCEEEEEECSSGGGGG-HHHHHHHHHTTS-EEEEEECTGGGGTC
T ss_pred CCEEEEEEeCcHHHHH-HHHHHHHHhcCC-CEEEEEcchHHHhc
Confidence 5799999999998776 899999999999 99999988554433
No 71
>3fgn_A Dethiobiotin synthetase; biotin biosynthesis, BIOD, ATP-BIND ligase, magnesium, nucleotide-binding; 1.85A {Mycobacterium tuberculosis} PDB: 3fmf_A* 3fmi_A* 3fpa_A*
Probab=73.14 E-value=32 Score=30.44 Aligned_cols=119 Identities=13% Similarity=0.085 Sum_probs=67.8
Q ss_pred CcEEEEEcCC--CccChHHHHHHHHHHHHCCCeEEEEeC---C---c--chhhhhhHhhhcccCCCceEEEEeeCCCccc
Q 039701 8 QLHFILFPFL--AQGHMIPMIDIARLLAQHGALVTIVTT---P---M--NAARFQNVIERGIQSGLRIQVIEFYFPCQEV 77 (476)
Q Consensus 8 ~~~vl~~~~p--~~GHv~P~l~La~~L~~rGH~Vt~~~~---~---~--~~~~~~~~~~~~~~~g~~i~~~~i~~~~~~~ 77 (476)
+++.+|++.. .-|-..-.+.|++.|+++|++|.++=+ . . ....+++.. +......++-+.
T Consensus 25 ~m~~i~Itgt~t~vGKT~vt~gL~~~l~~~G~~V~~fKPv~~g~~~~~~D~~~~~~~~------g~~~~~~~~~~~---- 94 (251)
T 3fgn_A 25 HMTILVVTGTGTGVGKTVVCAALASAARQAGIDVAVCKPVQTGTARGDDDLAEVGRLA------GVTQLAGLARYP---- 94 (251)
T ss_dssp SCEEEEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEEEEEECCGGGTCCHHHHHHHHH------CCCEEEEEEECS----
T ss_pred CCCEEEEEeCCCCCcHHHHHHHHHHHHHHCCCeEEEEeeeecCCCCCCHHHHHHHHHc------CCCCCCCCeeEC----
Confidence 4455555433 568889999999999999999999842 1 1 122222221 111111111110
Q ss_pred CCCCCCCCCCCCCCcCcHHHHHHHHH----HchHHHHHHHHhcCCCCeEEEecCCC----------chhHHHHhHcCCCc
Q 039701 78 GLPEGCESWDKLPSMALLPKFFAAIE----MLRLPLETLFKEIQPKPGCLISDVCL----------PWTVSSACKFNVPR 143 (476)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~l~~~l~~~~~~~D~vI~D~~~----------~~~~~~A~~~giP~ 143 (476)
. +. -.......+ ...+.+.+.++++..++|+||.|... .....+|+.++.|+
T Consensus 95 ---~--------p~---sP~~aa~~~~~~~~~~~~i~~~~~~l~~~~D~vlIEGagGl~~pl~~~~~~~adla~~l~~pV 160 (251)
T 3fgn_A 95 ---Q--------PM---APAAAAEHAGMALPARDQIVRLIADLDRPGRLTLVEGAGGLLVELAEPGVTLRDVAVDVAAAA 160 (251)
T ss_dssp ---S--------SS---CHHHHHHHTTCCCCCHHHHHHHHHTTCCTTCEEEEECSSSTTCEEETTTEEHHHHHHHTTCEE
T ss_pred ---C--------CC---ChHHHHHHcCCCCCCHHHHHHHHHHHHhcCCEEEEECCCCCcCCcCcccchHHHHHHHcCCCE
Confidence 0 00 011111111 12355666666666789999988731 23468999999999
Q ss_pred EEEecch
Q 039701 144 IVFHGFS 150 (476)
Q Consensus 144 v~~~~~~ 150 (476)
+.+....
T Consensus 161 ILV~~~~ 167 (251)
T 3fgn_A 161 LVVVTAD 167 (251)
T ss_dssp EEEECSS
T ss_pred EEEEcCC
Confidence 9876554
No 72
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=72.11 E-value=5.8 Score=34.59 Aligned_cols=155 Identities=14% Similarity=0.063 Sum_probs=80.2
Q ss_pred ccccCCCCCceEEEecCCcccCCHHHHHHHHHHHHhCCCCeEEEEcCCCCCchhHHHHhcCCCeEeeccccHHHhhhCCC
Q 039701 271 KWLDSWQPGSAVYVCLGSLCDCSTRQLIELGLGLEATKKPFIWVIRPGDQAFEKFEERIEGRGLLIRGWAPQVVILSHPA 350 (476)
Q Consensus 271 ~~l~~~~~~~vv~vs~GS~~~~~~~~~~~i~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~nv~~~~~vpq~~ll~~~~ 350 (476)
-|++-.. ++|+.|..|.+. ...++.|.+.+..+.++..... +.+.......++.+....-....|..++
T Consensus 25 ifl~L~g-k~VLVVGgG~va-------~~ka~~Ll~~GA~VtVvap~~~---~~l~~l~~~~~i~~i~~~~~~~dL~~ad 93 (223)
T 3dfz_A 25 VMLDLKG-RSVLVVGGGTIA-------TRRIKGFLQEGAAITVVAPTVS---AEINEWEAKGQLRVKRKKVGEEDLLNVF 93 (223)
T ss_dssp EEECCTT-CCEEEECCSHHH-------HHHHHHHGGGCCCEEEECSSCC---HHHHHHHHTTSCEEECSCCCGGGSSSCS
T ss_pred cEEEcCC-CEEEEECCCHHH-------HHHHHHHHHCCCEEEEECCCCC---HHHHHHHHcCCcEEEECCCCHhHhCCCC
Confidence 3444333 458888877543 3445666667888777654322 2344433344555544333445667777
Q ss_pred ceeeecccChhhHHHHHHcCCCEecccc-cccchhhHH-----HHHHhhcceEEeccCCCCCCcccccCCcccchhHHHH
Q 039701 351 IGGFLTHCGWNSVLEAVSNGLPMVTWPF-FADQFCNEK-----LVVQVLRIGVTIGAERPPSLADEERNGVPVKKEDVKK 424 (476)
Q Consensus 351 ~~~~I~HgG~~s~~eal~~GvP~l~~P~-~~DQ~~~a~-----~v~e~~g~G~~l~~~~~~~~~~~~~~~~~~t~~~l~~ 424 (476)
+ +|.--|.-.+.+.++.-.- ..+|+ ..|.|..+. .+ ++-++-+.+... +....-+..|++
T Consensus 94 L--VIaAT~d~~~N~~I~~~ak-~gi~VNvvD~p~~~~f~~Paiv-~rg~l~iaIST~----------G~sP~la~~iR~ 159 (223)
T 3dfz_A 94 F--IVVATNDQAVNKFVKQHIK-NDQLVNMASSFSDGNIQIPAQF-SRGRLSLAISTD----------GASPLLTKRIKE 159 (223)
T ss_dssp E--EEECCCCTHHHHHHHHHSC-TTCEEEC-----CCSEECCEEE-EETTEEEEEECT----------TSCHHHHHHHHH
T ss_pred E--EEECCCCHHHHHHHHHHHh-CCCEEEEeCCcccCeEEEeeEE-EeCCEEEEEECC----------CCCcHHHHHHHH
Confidence 7 8888887766666554332 33333 235443332 22 222333333332 112344577888
Q ss_pred HHHHHhcCChhhHHHHHHHHHHHHHHHH
Q 039701 425 AINMLMDEGEERDERRRRAREYGETAKT 452 (476)
Q Consensus 425 ~i~~ll~~~~~~~~~r~~a~~l~~~~~~ 452 (476)
.|.+++. +.-..+-+.+.++..++++
T Consensus 160 ~ie~~lp--~~~~~~~~~~~~~R~~vk~ 185 (223)
T 3dfz_A 160 DLSSNYD--ESYTQYTQFLYECRVLIHR 185 (223)
T ss_dssp HHHHHSC--THHHHHHHHHHHHHHHHHH
T ss_pred HHHHHcc--HHHHHHHHHHHHHHHHHHH
Confidence 8888883 3333455556666665554
No 73
>4dim_A Phosphoribosylglycinamide synthetase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ligase; 2.61A {Anaerococcus prevotii}
Probab=71.67 E-value=12 Score=35.67 Aligned_cols=33 Identities=9% Similarity=0.101 Sum_probs=26.8
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHHCCCeEEEEeCC
Q 039701 8 QLHFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTTP 45 (476)
Q Consensus 8 ~~~vl~~~~p~~GHv~P~l~La~~L~~rGH~Vt~~~~~ 45 (476)
..+|+++..+.. .+.+++.+++.|++|.++..+
T Consensus 7 ~~~ilI~g~g~~-----~~~~~~a~~~~G~~~v~v~~~ 39 (403)
T 4dim_A 7 NKRLLILGAGRG-----QLGLYKAAKELGIHTIAGTMP 39 (403)
T ss_dssp CCEEEEECCCGG-----GHHHHHHHHHHTCEEEEEECS
T ss_pred CCEEEEECCcHh-----HHHHHHHHHHCCCEEEEEcCC
Confidence 578999877654 366999999999999999764
No 74
>3auf_A Glycinamide ribonucleotide transformylase 1; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; 2.07A {Symbiobacterium toebii}
Probab=70.90 E-value=52 Score=28.58 Aligned_cols=107 Identities=7% Similarity=-0.018 Sum_probs=60.2
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHHC--CCeEEEEeCC-cchhhhhhHhhhcccCCCceEEEEeeCCCcccCCCCCCC
Q 039701 8 QLHFILFPFLAQGHMIPMIDIARLLAQH--GALVTIVTTP-MNAARFQNVIERGIQSGLRIQVIEFYFPCQEVGLPEGCE 84 (476)
Q Consensus 8 ~~~vl~~~~p~~GHv~P~l~La~~L~~r--GH~Vt~~~~~-~~~~~~~~~~~~~~~~g~~i~~~~i~~~~~~~~~~~~~~ 84 (476)
.+||+|+.+++.. -+..+.+.|.+. +++|..+.+. ......+.+ . ..++.+..++. ...
T Consensus 22 ~~rI~~l~SG~g~---~~~~~l~~l~~~~~~~~I~~Vvt~~~~~~~~~~A-~-----~~gIp~~~~~~--------~~~- 83 (229)
T 3auf_A 22 MIRIGVLISGSGT---NLQAILDGCREGRIPGRVAVVISDRADAYGLERA-R-----RAGVDALHMDP--------AAY- 83 (229)
T ss_dssp CEEEEEEESSCCH---HHHHHHHHHHTTSSSEEEEEEEESSTTCHHHHHH-H-----HTTCEEEECCG--------GGS-
T ss_pred CcEEEEEEeCCcH---HHHHHHHHHHhCCCCCeEEEEEcCCCchHHHHHH-H-----HcCCCEEEECc--------ccc-
Confidence 4699999877743 366777778776 6888766543 322222222 1 12466654321 000
Q ss_pred CCCCCCCcCcHHHHHHHHHHchHHHHHHHHhcCCCCeEEEecCCC-chhHHHHhHcCCCcEEEecc
Q 039701 85 SWDKLPSMALLPKFFAAIEMLRLPLETLFKEIQPKPGCLISDVCL-PWTVSSACKFNVPRIVFHGF 149 (476)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~D~vI~D~~~-~~~~~~A~~~giP~v~~~~~ 149 (476)
. + .....+.+.+.+++ .+||+||+-.+. .-...+-..+...++-++++
T Consensus 84 -----~--~--------r~~~~~~~~~~l~~--~~~Dliv~agy~~IL~~~~l~~~~~~~iNiHpS 132 (229)
T 3auf_A 84 -----P--S--------RTAFDAALAERLQA--YGVDLVCLAGYMRLVRGPMLTAFPNRILNIHPS 132 (229)
T ss_dssp -----S--S--------HHHHHHHHHHHHHH--TTCSEEEESSCCSCCCHHHHHHSTTCEEEEESS
T ss_pred -----c--c--------hhhccHHHHHHHHh--cCCCEEEEcChhHhCCHHHHhhccCCEEEEccC
Confidence 0 0 01222355667777 899999987764 44555666666667764443
No 75
>2i2x_B MTAC, methyltransferase 1; TIM barrel and helix bundle (MTAB), rossman fold and helix B (MTAC); HET: B13; 2.50A {Methanosarcina barkeri}
Probab=70.40 E-value=6.1 Score=35.35 Aligned_cols=38 Identities=16% Similarity=-0.004 Sum_probs=35.1
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHHCCCeEEEEeCC
Q 039701 8 QLHFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTTP 45 (476)
Q Consensus 8 ~~~vl~~~~p~~GHv~P~l~La~~L~~rGH~Vt~~~~~ 45 (476)
+.+|++.+.++..|-....-++..|..+|++|.++...
T Consensus 123 ~~~vlla~~~gd~HdiG~~iva~~L~~~G~~Vi~LG~~ 160 (258)
T 2i2x_B 123 KGTVVCHVAEGDVHDIGKNIVTALLRANGYNVVDLGRD 160 (258)
T ss_dssp SCEEEEEECTTCCCCHHHHHHHHHHHHTTCEEEEEEEE
T ss_pred CCeEEEEeCCCCccHHHHHHHHHHHHHCCCEEEECCCC
Confidence 67999999999999999999999999999999988653
No 76
>4dzz_A Plasmid partitioning protein PARF; deviant walker BOX, DNA segregation, unknown function; HET: ADP; 1.80A {Escherichia coli} PDB: 4e03_A* 4e07_A* 4e09_A*
Probab=70.35 E-value=28 Score=29.12 Aligned_cols=37 Identities=27% Similarity=0.333 Sum_probs=29.5
Q ss_pred EEEEEc--CCCccChHHHHHHHHHHHHCCCeEEEEeCCc
Q 039701 10 HFILFP--FLAQGHMIPMIDIARLLAQHGALVTIVTTPM 46 (476)
Q Consensus 10 ~vl~~~--~p~~GHv~P~l~La~~L~~rGH~Vt~~~~~~ 46 (476)
|++.+. -++-|-..=...||..|+++|++|.++-...
T Consensus 2 ~vi~v~s~kgG~GKTt~a~~la~~la~~g~~vlliD~D~ 40 (206)
T 4dzz_A 2 KVISFLNPKGGSGKTTAVINIATALSRSGYNIAVVDTDP 40 (206)
T ss_dssp EEEEECCSSTTSSHHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred eEEEEEeCCCCccHHHHHHHHHHHHHHCCCeEEEEECCC
Confidence 344443 4588999999999999999999999996543
No 77
>2bw0_A 10-FTHFDH, 10-formyltetrahydrofolate dehydrogenase; nucleotide biosynthesis, oxidoreductase; 1.7A {Homo sapiens} SCOP: b.46.1.1 c.65.1.1 PDB: 2cfi_A* 1s3i_A
Probab=69.53 E-value=33 Score=31.75 Aligned_cols=105 Identities=11% Similarity=0.065 Sum_probs=57.1
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHHCCCeEEEEeC-Ccc---hhhhhhHhhhcccCCCceEEEEeeCCCcccCCCCCC
Q 039701 8 QLHFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTT-PMN---AARFQNVIERGIQSGLRIQVIEFYFPCQEVGLPEGC 83 (476)
Q Consensus 8 ~~~vl~~~~p~~GHv~P~l~La~~L~~rGH~Vt~~~~-~~~---~~~~~~~~~~~~~~g~~i~~~~i~~~~~~~~~~~~~ 83 (476)
++||+|+. --+-...+.+.|.++||+|..+.+ ++- ...+....... ++.+.... ..
T Consensus 22 ~mrIvf~G-----~~~fa~~~L~~L~~~~~~i~~Vvt~pd~~~~~~~v~~~A~~~-----gIpv~~~~----------~~ 81 (329)
T 2bw0_A 22 SMKIAVIG-----QSLFGQEVYCHLRKEGHEVVGVFTVPDKDGKADPLGLEAEKD-----GVPVFKYS----------RW 81 (329)
T ss_dssp CCEEEEEC-----CHHHHHHHHHHHHHTTCEEEEEEECCCCSSCCCHHHHHHHHH-----TCCEEECS----------CC
T ss_pred CCEEEEEc-----CcHHHHHHHHHHHHCCCeEEEEEeCCCcCCCCCHHHHHHHHc-----CCCEEecC----------cc
Confidence 68999993 224444577889999999986654 321 11122221111 35544321 00
Q ss_pred CCCCCCCCcCcHHHHHHHHHHchHHHHHHHHhcCCCCeEEEecCCC-chhHHHHhHcCCCcEEEecch
Q 039701 84 ESWDKLPSMALLPKFFAAIEMLRLPLETLFKEIQPKPGCLISDVCL-PWTVSSACKFNVPRIVFHGFS 150 (476)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~D~vI~D~~~-~~~~~~A~~~giP~v~~~~~~ 150 (476)
... ....+++.+.+++ .++|++|+-.+. .-...+-......++-++++.
T Consensus 82 ~~~----------------~~~~~~~~~~l~~--~~~Dliv~a~y~~ilp~~il~~~~~g~iNiHpSL 131 (329)
T 2bw0_A 82 RAK----------------GQALPDVVAKYQA--LGAELNVLPFCSQFIPMEIISAPRHGSIIYHPSL 131 (329)
T ss_dssp EET----------------TEECHHHHHHHHT--TCCSEEEESSCSSCCCHHHHTCSTTCEEEEESSC
T ss_pred ccc----------------ccccHHHHHHHHh--cCCCEEEEeehhhhCCHHHHhhCcCCEEEEcCCc
Confidence 000 0111234555666 799999977664 444556666666677765553
No 78
>3qjg_A Epidermin biosynthesis protein EPID; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: FMN; 2.04A {Staphylococcus aureus} SCOP: c.34.1.0
Probab=69.23 E-value=5.8 Score=33.10 Aligned_cols=43 Identities=5% Similarity=-0.059 Sum_probs=35.7
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHHCCCeEEEEeCCcchhhh
Q 039701 8 QLHFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTTPMNAARF 51 (476)
Q Consensus 8 ~~~vl~~~~p~~GHv~P~l~La~~L~~rGH~Vt~~~~~~~~~~~ 51 (476)
.+||++.-.++.|=+. ...|.+.|+++|++|.++.++...+.+
T Consensus 5 ~k~IllgvTGs~aa~k-~~~ll~~L~~~g~~V~vv~T~~A~~fi 47 (175)
T 3qjg_A 5 GENVLICLCGSVNSIN-ISHYIIELKSKFDEVNVIASTNGRKFI 47 (175)
T ss_dssp CCEEEEEECSSGGGGG-HHHHHHHHTTTCSEEEEEECTGGGGGS
T ss_pred CCEEEEEEeCHHHHHH-HHHHHHHHHHCCCEEEEEECcCHHHHh
Confidence 3589999989877765 889999999999999999988655444
No 79
>3ezx_A MMCP 1, monomethylamine corrinoid protein 1; N terminal all helical bundle C terminal rossmann fold, cobalt, metal-binding; HET: HCB; 2.56A {Methanosarcina barkeri}
Probab=67.36 E-value=11 Score=32.56 Aligned_cols=46 Identities=13% Similarity=0.006 Sum_probs=39.2
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHHCCCeEEEEeCCcchhhhhh
Q 039701 8 QLHFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTTPMNAARFQN 53 (476)
Q Consensus 8 ~~~vl~~~~p~~GHv~P~l~La~~L~~rGH~Vt~~~~~~~~~~~~~ 53 (476)
+.+|++.+.++..|-....-++..|..+|++|+.+...--.+.+.+
T Consensus 92 ~~~vll~~v~gd~HdiG~~iv~~~l~~~G~~Vi~LG~~vp~e~iv~ 137 (215)
T 3ezx_A 92 AGLAITFVAEGDIHDIGHRLVTTMLGANGFQIVDLGVDVLNENVVE 137 (215)
T ss_dssp CCEEEEEECTTCCCCHHHHHHHHHHHHTSCEEEECCSSCCHHHHHH
T ss_pred CCeEEEEeCCCChhHHHHHHHHHHHHHCCCeEEEcCCCCCHHHHHH
Confidence 6899999999999999999999999999999999876544444433
No 80
>2qs7_A Uncharacterized protein; putative oxidoreductase of the DSRE/DSRF-like family, struct genomics, joint center for structural genomics; HET: MSE EPE; 2.09A {Sulfolobus solfataricus P2}
Probab=66.67 E-value=7.6 Score=31.19 Aligned_cols=52 Identities=15% Similarity=0.047 Sum_probs=36.0
Q ss_pred CCCCCCCCcEEEEEcCCCccChHHHHHHHHHHHHCCCeEEEEeCCcchhhhhh
Q 039701 1 MASQAGSQLHFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTTPMNAARFQN 53 (476)
Q Consensus 1 m~~~~~~~~~vl~~~~p~~GHv~P~l~La~~L~~rGH~Vt~~~~~~~~~~~~~ 53 (476)
|+.++. +.-++++..+..-.+++.+.+|...++.|++|+++.+......+.+
T Consensus 2 ~~~~m~-~kl~II~~sg~~d~~~~a~~lA~~Aaa~g~eV~iF~t~~gv~~l~k 53 (144)
T 2qs7_A 2 MAEEKK-KKLSIIVFSGTIDKLMPVGILTSGAAASGYEVNLFFTFWGLQAITK 53 (144)
T ss_dssp -----C-CEEEEEECCCSHHHHHHHHHHHHHHHHTTCEEEEEECHHHHHHTBH
T ss_pred cccccc-CCEEEEEEcCCHHHHHHHHHHHHHHHHcCCcEEEEEehHHHHHHhc
Confidence 444433 4455566667788899999999999999999999988765544443
No 81
>1p3y_1 MRSD protein; flavoprotein, FMN, rossmann fold, HFCD family, oxdidative decarboxylation, cystein, lantibiotics, mersacidin, oxidore; HET: FAD; 2.54A {Bacillus SP} SCOP: c.34.1.1
Probab=65.84 E-value=3.8 Score=34.92 Aligned_cols=43 Identities=5% Similarity=-0.081 Sum_probs=35.7
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHHCCCeEEEEeCCcchhhh
Q 039701 8 QLHFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTTPMNAARF 51 (476)
Q Consensus 8 ~~~vl~~~~p~~GHv~P~l~La~~L~~rGH~Vt~~~~~~~~~~~ 51 (476)
+.||++.-.|+.|=+. ...|.+.|.++|++|.++.++.....+
T Consensus 8 ~k~IllgvTGs~aa~k-~~~l~~~L~~~g~~V~vv~T~~A~~fi 50 (194)
T 1p3y_1 8 DKKLLIGICGSISSVG-ISSYLLYFKSFFKEIRVVMTKTAEDLI 50 (194)
T ss_dssp GCEEEEEECSCGGGGG-THHHHHHHTTTSSEEEEEECHHHHHHS
T ss_pred CCEEEEEEECHHHHHH-HHHHHHHHHHCCCEEEEEEchhHHHHH
Confidence 5689999999888776 789999999999999999987554433
No 82
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=65.37 E-value=57 Score=30.31 Aligned_cols=101 Identities=17% Similarity=0.103 Sum_probs=61.4
Q ss_pred cEEEEEcCCCcc--C--hHHHHHHHHHHHHCCCeEEEEeCCcchhhhhhHhhhcccCCCceEEEEeeCCCcccCCCCCCC
Q 039701 9 LHFILFPFLAQG--H--MIPMIDIARLLAQHGALVTIVTTPMNAARFQNVIERGIQSGLRIQVIEFYFPCQEVGLPEGCE 84 (476)
Q Consensus 9 ~~vl~~~~p~~G--H--v~P~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~g~~i~~~~i~~~~~~~~~~~~~~ 84 (476)
.-|+|.|..+.. . ..-+..|++.|.++|++|.++..+...+..++...... -+.+. +..
T Consensus 186 ~~i~i~pga~~~~k~wp~~~~~~l~~~l~~~g~~vvl~g~~~e~~~~~~i~~~~~-----~~~~~---------l~g--- 248 (349)
T 3tov_A 186 ILIGFNIGSAVPEKRWPAERFAHVADYFGRLGYKTVFFGGPMDLEMVQPVVEQME-----TKPIV---------ATG--- 248 (349)
T ss_dssp CEEEEECCCSSGGGCCCHHHHHHHHHHHHHHTCEEEECCCTTTHHHHHHHHHTCS-----SCCEE---------CTT---
T ss_pred CEEEEeCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEeCcchHHHHHHHHHhcc-----cccEE---------eeC---
Confidence 456666554332 2 23588999999989999999877766665555432110 00000 000
Q ss_pred CCCCCCCcCcHHHHHHHHHHchHHHHHHHHhcCCCCeEEEecCCCchhHHHHhHcCCCcEEEecch
Q 039701 85 SWDKLPSMALLPKFFAAIEMLRLPLETLFKEIQPKPGCLISDVCLPWTVSSACKFNVPRIVFHGFS 150 (476)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~D~vI~D~~~~~~~~~A~~~giP~v~~~~~~ 150 (476)
. . ...++..+++ +.|++|+-- .+...+|..+|+|.|.++..+
T Consensus 249 ------~-~-----------sl~e~~ali~----~a~~~i~~D--sG~~HlAaa~g~P~v~lfg~t 290 (349)
T 3tov_A 249 ------K-F-----------QLGPLAAAMN----RCNLLITND--SGPMHVGISQGVPIVALYGPS 290 (349)
T ss_dssp ------C-C-----------CHHHHHHHHH----TCSEEEEES--SHHHHHHHTTTCCEEEECSSC
T ss_pred ------C-C-----------CHHHHHHHHH----hCCEEEECC--CCHHHHHHhcCCCEEEEECCC
Confidence 0 0 1223455554 589988643 467888999999999986654
No 83
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=65.20 E-value=20 Score=30.35 Aligned_cols=33 Identities=9% Similarity=-0.140 Sum_probs=26.9
Q ss_pred CCCeEEEecCCCchhHHHHhHcCCCcEEEecchHHH
Q 039701 118 PKPGCLISDVCLPWTVSSACKFNVPRIVFHGFSCFC 153 (476)
Q Consensus 118 ~~~D~vI~D~~~~~~~~~A~~~giP~v~~~~~~~~~ 153 (476)
.++|+||.|. .+..+|+++|+|.+.+.+...+.
T Consensus 141 ~G~~vvVG~~---~~~~~A~~~Gl~~vli~sg~eSI 173 (196)
T 2q5c_A 141 ENIKIVVSGK---TVTDEAIKQGLYGETINSGEESL 173 (196)
T ss_dssp TTCCEEEECH---HHHHHHHHTTCEEEECCCCHHHH
T ss_pred CCCeEEECCH---HHHHHHHHcCCcEEEEecCHHHH
Confidence 6999999984 45889999999999987755443
No 84
>3mc3_A DSRE/DSRF-like family protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.49A {Sulfolobus solfataricus}
Probab=63.50 E-value=14 Score=29.18 Aligned_cols=42 Identities=5% Similarity=-0.053 Sum_probs=30.1
Q ss_pred EEEEE-cCC--CccChHHHHHHHHHHHHCCCeEEEEeCCcchhhh
Q 039701 10 HFILF-PFL--AQGHMIPMIDIARLLAQHGALVTIVTTPMNAARF 51 (476)
Q Consensus 10 ~vl~~-~~p--~~GHv~P~l~La~~L~~rGH~Vt~~~~~~~~~~~ 51 (476)
|++|+ ..+ ........+.+|...++.||+|+++.+......+
T Consensus 17 kl~ii~~sgP~~~~~~~~al~lA~~A~a~g~eV~vFf~~dGV~~l 61 (134)
T 3mc3_A 17 XILIVVTHGPEDLDRTYAPLFMASISASMEYETSVFFMIXGPXLL 61 (134)
T ss_dssp EEEEEECCCGGGTHHHHHHHHHHHHHHHTTCEEEEEECTTGGGGG
T ss_pred eEEEEEccCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEeCcHHHH
Confidence 44443 334 4667788899999999999999988776544433
No 85
>3tqr_A Phosphoribosylglycinamide formyltransferase; purines, pyrimidines, nucleosides, nucleotides; HET: NHE; 1.97A {Coxiella burnetii} SCOP: c.65.1.0
Probab=63.37 E-value=52 Score=28.29 Aligned_cols=107 Identities=9% Similarity=0.077 Sum_probs=58.7
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHH-CCCeEEEEeC-CcchhhhhhHhhhcccCCCceEEEEeeCCCcccCCCCCCCC
Q 039701 8 QLHFILFPFLAQGHMIPMIDIARLLAQ-HGALVTIVTT-PMNAARFQNVIERGIQSGLRIQVIEFYFPCQEVGLPEGCES 85 (476)
Q Consensus 8 ~~~vl~~~~p~~GHv~P~l~La~~L~~-rGH~Vt~~~~-~~~~~~~~~~~~~~~~~g~~i~~~~i~~~~~~~~~~~~~~~ 85 (476)
++||+++.++..+.+..++ +...+ .+++|..+.+ .......+.+.+ .++.+..++.. .+
T Consensus 5 ~~riavl~SG~Gsnl~all---~~~~~~~~~eI~~Vis~~~~a~~~~~A~~------~gIp~~~~~~~----~~------ 65 (215)
T 3tqr_A 5 PLPIVVLISGNGTNLQAII---GAIQKGLAIEIRAVISNRADAYGLKRAQQ------ADIPTHIIPHE----EF------ 65 (215)
T ss_dssp CEEEEEEESSCCHHHHHHH---HHHHTTCSEEEEEEEESCTTCHHHHHHHH------TTCCEEECCGG----GS------
T ss_pred CcEEEEEEeCCcHHHHHHH---HHHHcCCCCEEEEEEeCCcchHHHHHHHH------cCCCEEEeCcc----cc------
Confidence 6799999988766555444 44333 3689887655 332222222211 24665554310 00
Q ss_pred CCCCCCcCcHHHHHHHHHHchHHHHHHHHhcCCCCeEEEecCCC-chhHHHHhHcCCCcEEEecc
Q 039701 86 WDKLPSMALLPKFFAAIEMLRLPLETLFKEIQPKPGCLISDVCL-PWTVSSACKFNVPRIVFHGF 149 (476)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~D~vI~D~~~-~~~~~~A~~~giP~v~~~~~ 149 (476)
+ + -.....++.+.+++ .++|+||+-.+. .-...+-..+...++-++++
T Consensus 66 ----~--~--------r~~~d~~~~~~l~~--~~~Dliv~agy~~il~~~~l~~~~~~~iNiHpS 114 (215)
T 3tqr_A 66 ----P--S--------RTDFESTLQKTIDH--YDPKLIVLAGFMRKLGKAFVSHYSGRMINIHPS 114 (215)
T ss_dssp ----S--S--------HHHHHHHHHHHHHT--TCCSEEEESSCCSCCCHHHHHHTTTSEEEEESS
T ss_pred ----C--c--------hhHhHHHHHHHHHh--cCCCEEEEccchhhCCHHHHhhccCCeEEeCcc
Confidence 0 0 00112356677777 899999987754 44555666666667765443
No 86
>3kcq_A Phosphoribosylglycinamide formyltransferase; structural genomics, niaid, seattle structural center for infectious disease, ssgcid; 2.20A {Anaplasma phagocytophilum} SCOP: c.65.1.0
Probab=62.88 E-value=40 Score=29.01 Aligned_cols=105 Identities=9% Similarity=0.026 Sum_probs=57.7
Q ss_pred CCCCCcEEEEEcCCCccChHHHHHHHHHHHHC--CCeEEEEeC-CcchhhhhhHhhhcccCCCceEEEEeeCCCcccCCC
Q 039701 4 QAGSQLHFILFPFLAQGHMIPMIDIARLLAQH--GALVTIVTT-PMNAARFQNVIERGIQSGLRIQVIEFYFPCQEVGLP 80 (476)
Q Consensus 4 ~~~~~~~vl~~~~p~~GHv~P~l~La~~L~~r--GH~Vt~~~~-~~~~~~~~~~~~~~~~~g~~i~~~~i~~~~~~~~~~ 80 (476)
|++ ++||+++.+++.+. +.+|.+.+.+. +++|..+.+ .......+.+.+ .++.+..++.
T Consensus 5 ~~~-~~ri~vl~SG~gsn---l~all~~~~~~~~~~~I~~Vis~~~~a~~l~~A~~------~gIp~~~~~~-------- 66 (215)
T 3kcq_A 5 MKK-ELRVGVLISGRGSN---LEALAKAFSTEESSVVISCVISNNAEARGLLIAQS------YGIPTFVVKR-------- 66 (215)
T ss_dssp --C-CEEEEEEESSCCHH---HHHHHHHTCCC-CSEEEEEEEESCTTCTHHHHHHH------TTCCEEECCB--------
T ss_pred CCC-CCEEEEEEECCcHH---HHHHHHHHHcCCCCcEEEEEEeCCcchHHHHHHHH------cCCCEEEeCc--------
Confidence 444 78999998877554 34455555443 378887655 222222222211 1465554321
Q ss_pred CCCCCCCCCCCcCcHHHHHHHHHHchHHHHHHHHhcCCCCeEEEecCCC-chhHHHHhHcCCCcEEEecc
Q 039701 81 EGCESWDKLPSMALLPKFFAAIEMLRLPLETLFKEIQPKPGCLISDVCL-PWTVSSACKFNVPRIVFHGF 149 (476)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~D~vI~D~~~-~~~~~~A~~~giP~v~~~~~ 149 (476)
.. .. .+.+.+.+++ .++|+||+-.+. .-...+-..+.-.++-++++
T Consensus 67 ~~---------~~------------~~~~~~~L~~--~~~Dlivlagy~~IL~~~~l~~~~~~~iNiHpS 113 (215)
T 3kcq_A 67 KP---------LD------------IEHISTVLRE--HDVDLVCLAGFMSILPEKFVTDWHHKIINIHPS 113 (215)
T ss_dssp TT---------BC------------HHHHHHHHHH--TTCSEEEESSCCSCCCHHHHHHTTTSEEEEESS
T ss_pred cc---------CC------------hHHHHHHHHH--hCCCEEEEeCCceEeCHHHHhhccCCeEEECcc
Confidence 00 00 0456677777 899999977764 44555666666666764443
No 87
>2r8r_A Sensor protein; KDPD, PFAM02702, MCSG, structural genomics, protein structure initiative, midwest center for structural genomics, kinase; 2.30A {Pseudomonas syringae PV}
Probab=62.86 E-value=13 Score=32.40 Aligned_cols=39 Identities=18% Similarity=0.155 Sum_probs=35.7
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHHCCCeEEEEeCCc
Q 039701 8 QLHFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTTPM 46 (476)
Q Consensus 8 ~~~vl~~~~p~~GHv~P~l~La~~L~~rGH~Vt~~~~~~ 46 (476)
+++|++...|+-|-..=++++|..|+++|++|.++....
T Consensus 6 ~l~I~~~~kgGvGKTt~a~~la~~l~~~G~~V~v~d~D~ 44 (228)
T 2r8r_A 6 RLKVFLGAAPGVGKTYAMLQAAHAQLRQGVRVMAGVVET 44 (228)
T ss_dssp CEEEEEESSTTSSHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred eEEEEEECCCCCcHHHHHHHHHHHHHHCCCCEEEEEeCC
Confidence 799999999999999999999999999999998876543
No 88
>1sbz_A Probable aromatic acid decarboxylase; FMN binding, PAD1, UBIX, montreal-kingston bacterial structu genomics initiative, BSGI; HET: FMN; 2.00A {Escherichia coli} SCOP: c.34.1.1
Probab=62.28 E-value=8.7 Score=32.72 Aligned_cols=43 Identities=12% Similarity=0.125 Sum_probs=35.7
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHHC-CCeEEEEeCCcchhhhh
Q 039701 9 LHFILFPFLAQGHMIPMIDIARLLAQH-GALVTIVTTPMNAARFQ 52 (476)
Q Consensus 9 ~~vl~~~~p~~GHv~P~l~La~~L~~r-GH~Vt~~~~~~~~~~~~ 52 (476)
+||++.-.|+.|-+. ...|.+.|.++ |++|.++.++.....+.
T Consensus 1 ~~IllgvTGsiaa~k-~~~ll~~L~~~~g~~V~vv~T~~A~~fi~ 44 (197)
T 1sbz_A 1 MKLIVGMTGATGAPL-GVALLQALREMPNVETHLVMSKWAKTTIE 44 (197)
T ss_dssp CEEEEEECSSSCHHH-HHHHHHHHHTCTTCEEEEEECHHHHHHHH
T ss_pred CEEEEEEeChHHHHH-HHHHHHHHHhccCCEEEEEECchHHHHhH
Confidence 478888889887766 89999999999 99999999886555444
No 89
>3lqk_A Dipicolinate synthase subunit B; flavoprotein, PSI2, MCSG, structural protein structure initiative, midwest center for structural genomics; 2.10A {Bacillus halodurans}
Probab=58.89 E-value=11 Score=32.10 Aligned_cols=40 Identities=18% Similarity=-0.034 Sum_probs=32.8
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHHCCCeEEEEeCCcc
Q 039701 8 QLHFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTTPMN 47 (476)
Q Consensus 8 ~~~vl~~~~p~~GHv~P~l~La~~L~~rGH~Vt~~~~~~~ 47 (476)
..||++.-.|+.|=+.=.+.|.+.|.++|++|.++.++..
T Consensus 7 ~k~I~lgiTGs~aa~~k~~~ll~~L~~~g~eV~vv~T~~A 46 (201)
T 3lqk_A 7 GKHVGFGLTGSHCTYHEVLPQMERLVELGAKVTPFVTHTV 46 (201)
T ss_dssp TCEEEEECCSCGGGGGGTHHHHHHHHHTTCEEEEECSSCS
T ss_pred CCEEEEEEEChHHHHHHHHHHHHHHhhCCCEEEEEEChhH
Confidence 4689999988844442789999999999999999988733
No 90
>1jkx_A GART;, phosphoribosylglycinamide formyltransferase; purine biosynthesis, anti-cancer agent; HET: 138; 1.60A {Escherichia coli} SCOP: c.65.1.1 PDB: 1cdd_A 1cde_A* 1c2t_A* 1grc_A 1gar_A* 2gar_A 3gar_A 1c3e_A*
Probab=58.80 E-value=86 Score=26.80 Aligned_cols=106 Identities=8% Similarity=0.026 Sum_probs=59.0
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHHC--CCeEEEEeCC-cchhhhhhHhhhcccCCCceEEEEeeCCCcccCCCCCCCC
Q 039701 9 LHFILFPFLAQGHMIPMIDIARLLAQH--GALVTIVTTP-MNAARFQNVIERGIQSGLRIQVIEFYFPCQEVGLPEGCES 85 (476)
Q Consensus 9 ~~vl~~~~p~~GHv~P~l~La~~L~~r--GH~Vt~~~~~-~~~~~~~~~~~~~~~~g~~i~~~~i~~~~~~~~~~~~~~~ 85 (476)
+||+++.++..+ -+.+|.+.+.+. +|+|..+.+. ......+.+ . ..++.+..++.. .+.
T Consensus 1 ~ri~vl~Sg~gs---nl~ali~~~~~~~~~~~i~~Vis~~~~~~~~~~A-~-----~~gIp~~~~~~~----~~~----- 62 (212)
T 1jkx_A 1 MNIVVLISGNGS---NLQAIIDACKTNKIKGTVRAVFSNKADAFGLERA-R-----QAGIATHTLIAS----AFD----- 62 (212)
T ss_dssp CEEEEEESSCCH---HHHHHHHHHHTTSSSSEEEEEEESCTTCHHHHHH-H-----HTTCEEEECCGG----GCS-----
T ss_pred CEEEEEEECCcH---HHHHHHHHHHcCCCCceEEEEEeCCCchHHHHHH-H-----HcCCcEEEeCcc----ccc-----
Confidence 378888877664 366677777665 6898766544 322222222 1 124666553210 000
Q ss_pred CCCCCCcCcHHHHHHHHHHchHHHHHHHHhcCCCCeEEEecCCC-chhHHHHhHcCCCcEEEecc
Q 039701 86 WDKLPSMALLPKFFAAIEMLRLPLETLFKEIQPKPGCLISDVCL-PWTVSSACKFNVPRIVFHGF 149 (476)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~D~vI~D~~~-~~~~~~A~~~giP~v~~~~~ 149 (476)
+ .....+.+.+.+++ .+||+||+-.+. .-...+-..+...++-++++
T Consensus 63 -------~--------r~~~~~~~~~~l~~--~~~Dliv~agy~~il~~~~l~~~~~~~iNiHpS 110 (212)
T 1jkx_A 63 -------S--------REAYDRELIHEIDM--YAPDVVVLAGFMRILSPAFVSHYAGRLLNIHPS 110 (212)
T ss_dssp -------S--------HHHHHHHHHHHHGG--GCCSEEEESSCCSCCCHHHHHHTTTSEEEEESS
T ss_pred -------c--------hhhccHHHHHHHHh--cCCCEEEEeChhhhCCHHHHhhccCCEEEEccC
Confidence 0 01222455667777 899999987764 44555666666667765443
No 91
>3tqq_A Methionyl-tRNA formyltransferase; protein synthesis; 2.00A {Coxiella burnetii}
Probab=58.66 E-value=59 Score=29.83 Aligned_cols=33 Identities=18% Similarity=0.110 Sum_probs=25.4
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHHCCCeEEEEeCC
Q 039701 8 QLHFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTTP 45 (476)
Q Consensus 8 ~~~vl~~~~p~~GHv~P~l~La~~L~~rGH~Vt~~~~~ 45 (476)
++||+|+-.|..+ +...+.|.+.||+|..+.+.
T Consensus 2 ~mrivf~Gtp~fa-----~~~L~~L~~~~~~v~~Vvt~ 34 (314)
T 3tqq_A 2 SLKIVFAGTPQFA-----VPTLRALIDSSHRVLAVYTQ 34 (314)
T ss_dssp CCEEEEEECSGGG-----HHHHHHHHHSSSEEEEEECC
T ss_pred CcEEEEECCCHHH-----HHHHHHHHHCCCeEEEEEeC
Confidence 6899999888555 34457788899999877664
No 92
>1fmt_A Methionyl-tRNA FMet formyltransferase; initiator tRNA, translation initiation; 2.00A {Escherichia coli} SCOP: b.46.1.1 c.65.1.1 PDB: 2fmt_A* 3r8x_A
Probab=58.15 E-value=72 Score=29.21 Aligned_cols=41 Identities=12% Similarity=-0.030 Sum_probs=26.6
Q ss_pred HHHHHHHhcCCCCeEEEecCCC-chhHHHHhHcCCCcEEEecch
Q 039701 108 PLETLFKEIQPKPGCLISDVCL-PWTVSSACKFNVPRIVFHGFS 150 (476)
Q Consensus 108 ~l~~~l~~~~~~~D~vI~D~~~-~~~~~~A~~~giP~v~~~~~~ 150 (476)
++.+.+++ .+||++|+-.+. .-...+-......++-++++.
T Consensus 72 ~~~~~l~~--~~~Dliv~~~y~~ilp~~il~~~~~g~iNiHpSL 113 (314)
T 1fmt_A 72 ENQQLVAE--LQADVMVVVAYGLILPKAVLEMPRLGCINVHGSL 113 (314)
T ss_dssp HHHHHHHH--TTCSEEEEESCCSCCCHHHHHSSTTCEEEEESSS
T ss_pred HHHHHHHh--cCCCEEEEeeccccCCHHHHhhccCCEEEEcCCc
Confidence 44556677 799999876653 444555566666677765553
No 93
>3pdi_A Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=57.05 E-value=52 Score=32.32 Aligned_cols=35 Identities=23% Similarity=0.115 Sum_probs=27.7
Q ss_pred HHHHHHHHhcCCCCeEEEecCCCchhHHHHhHcCCCcEEE
Q 039701 107 LPLETLFKEIQPKPGCLISDVCLPWTVSSACKFNVPRIVF 146 (476)
Q Consensus 107 ~~l~~~l~~~~~~~D~vI~D~~~~~~~~~A~~~giP~v~~ 146 (476)
.++.+.+++ .+||++|... ....+|+++|||++.+
T Consensus 391 ~el~~~i~~--~~pDL~ig~~---~~~~~a~k~gIP~~~~ 425 (483)
T 3pdi_A 391 RVLLKTVDE--YQADILIAGG---RNMYTALKGRVPFLDI 425 (483)
T ss_dssp HHHHHHHHH--TTCSEEECCG---GGHHHHHHTTCCBCCC
T ss_pred HHHHHHHHh--cCCCEEEECC---chhHHHHHcCCCEEEe
Confidence 355677777 7999999864 4567899999999864
No 94
>2ejb_A Probable aromatic acid decarboxylase; phenylacrylic acid decarboxylase, X-RAY diffraction, structural genomics, NPPSFA; 2.15A {Aquifex aeolicus}
Probab=56.02 E-value=17 Score=30.75 Aligned_cols=43 Identities=16% Similarity=0.126 Sum_probs=35.4
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHHCCCeEEEEeCCcchhhhhh
Q 039701 10 HFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTTPMNAARFQN 53 (476)
Q Consensus 10 ~vl~~~~p~~GHv~P~l~La~~L~~rGH~Vt~~~~~~~~~~~~~ 53 (476)
||++.-.|+.|-+ =...|.++|.++|++|.++.++.....+..
T Consensus 3 ~IllgvTGs~aa~-k~~~l~~~L~~~g~~V~vv~T~~A~~~i~~ 45 (189)
T 2ejb_A 3 KIALCITGASGVI-YGIKLLQVLEELDFSVDLVISRNAKVVLKE 45 (189)
T ss_dssp EEEEEECSSTTHH-HHHHHHHHHHHTTCEEEEEECHHHHHHHHH
T ss_pred EEEEEEECHHHHH-HHHHHHHHHHHCCCEEEEEEChhHHHHhhH
Confidence 8999999998855 578999999999999999998855544443
No 95
>2iz6_A Molybdenum cofactor carrier protein; metal transport; 1.60A {Chlamydomonas reinhardtii} PDB: 2iz5_A 2iz7_A
Probab=55.46 E-value=21 Score=29.68 Aligned_cols=46 Identities=15% Similarity=0.031 Sum_probs=30.2
Q ss_pred eEeeccccHHH-hhhCCCceeeecccChhhHHH---HHHcCCCEeccccc
Q 039701 334 LLIRGWAPQVV-ILSHPAIGGFLTHCGWNSVLE---AVSNGLPMVTWPFF 379 (476)
Q Consensus 334 v~~~~~vpq~~-ll~~~~~~~~I~HgG~~s~~e---al~~GvP~l~~P~~ 379 (476)
.++.+..+... ++..-+-..++-=||.||+.| ++.+++|++.+|.|
T Consensus 91 ~i~~~~~~~Rk~~m~~~sda~IvlpGg~GTL~E~~~al~~~kpV~~l~~~ 140 (176)
T 2iz6_A 91 PIVTGLGSARDNINALSSNVLVAVGMGPGTAAEVALALKAKKPVVLLGTQ 140 (176)
T ss_dssp EEECCCCSSSCCCCGGGCSEEEEESCCHHHHHHHHHHHHTTCCEEEESCC
T ss_pred eEEcCCHHHHHHHHHHhCCEEEEecCCccHHHHHHHHHHhCCcEEEEcCc
Confidence 34445555443 443333345666788987665 57799999999984
No 96
>3iqw_A Tail-anchored protein targeting factor GET3; ATPase, Zn binding, protein transport; HET: ANP; 3.00A {Chaetomium thermophilum} PDB: 3iqx_A* 3ibg_A*
Probab=55.08 E-value=76 Score=29.33 Aligned_cols=40 Identities=20% Similarity=0.152 Sum_probs=32.1
Q ss_pred cEEEEE-cCCCccChHHHHHHHHHHHHCCCeEEEEeCCcch
Q 039701 9 LHFILF-PFLAQGHMIPMIDIARLLAQHGALVTIVTTPMNA 48 (476)
Q Consensus 9 ~~vl~~-~~p~~GHv~P~l~La~~L~~rGH~Vt~~~~~~~~ 48 (476)
.+|+|+ .-|+-|-..-..+||..|+++|++|.++......
T Consensus 16 ~~i~~~sgkGGvGKTt~a~~lA~~la~~g~~vllid~D~~~ 56 (334)
T 3iqw_A 16 LRWIFVGGKGGVGKTTTSCSLAIQLAKVRRSVLLLSTDPAH 56 (334)
T ss_dssp CCEEEEECSTTSSHHHHHHHHHHHHTTSSSCEEEEECCSSC
T ss_pred eEEEEEeCCCCccHHHHHHHHHHHHHhCCCcEEEEECCCCC
Confidence 345444 4468899999999999999999999999876543
No 97
>3lyu_A Putative hydrogenase; the C-terminal has AN alpha-beta fold, structural genomics, PSI-2, protein structure initiative; 2.30A {Pyrococcus furiosus}
Probab=54.45 E-value=77 Score=24.91 Aligned_cols=35 Identities=14% Similarity=0.132 Sum_probs=28.5
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHHCCCeEEEEeCCc
Q 039701 9 LHFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTTPM 46 (476)
Q Consensus 9 ~~vl~~~~p~~GHv~P~l~La~~L~~rGH~Vt~~~~~~ 46 (476)
.++++++-++ =+.|++.+++.|.++|.+|+++ ...
T Consensus 19 ~~~llIaGG~--GiaPl~sm~~~l~~~~~~v~l~-g~R 53 (142)
T 3lyu_A 19 GKILAIGAYT--GIVEVYPIAKAWQEIGNDVTTL-HVT 53 (142)
T ss_dssp SEEEEEEETT--HHHHHHHHHHHHHHTTCEEEEE-EEE
T ss_pred CeEEEEECcC--cHHHHHHHHHHHHhcCCcEEEE-EeC
Confidence 3788887443 4899999999999999999998 544
No 98
>3da8_A Probable 5'-phosphoribosylglycinamide formyltransferase PURN; glycinamide ribonucleotide transformylase, structure; 1.30A {Mycobacterium tuberculosis} PDB: 3dcj_A*
Probab=54.42 E-value=61 Score=27.83 Aligned_cols=107 Identities=9% Similarity=0.074 Sum_probs=56.7
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHH-CCCeEEEEeCCcchhhhhhHhhhcccCCCceEEEEeeCCCcccCCCCCCCCC
Q 039701 8 QLHFILFPFLAQGHMIPMIDIARLLAQ-HGALVTIVTTPMNAARFQNVIERGIQSGLRIQVIEFYFPCQEVGLPEGCESW 86 (476)
Q Consensus 8 ~~~vl~~~~p~~GHv~P~l~La~~L~~-rGH~Vt~~~~~~~~~~~~~~~~~~~~~g~~i~~~~i~~~~~~~~~~~~~~~~ 86 (476)
++||+++.+++.+.+..++ +.+.+ .+++|..+.+.......+.+.+ .++.+..++.. .
T Consensus 12 ~~ri~vl~SG~gsnl~all---~~~~~~~~~eI~~Vis~~~a~~~~~A~~------~gIp~~~~~~~-------~----- 70 (215)
T 3da8_A 12 PARLVVLASGTGSLLRSLL---DAAVGDYPARVVAVGVDRECRAAEIAAE------ASVPVFTVRLA-------D----- 70 (215)
T ss_dssp SEEEEEEESSCCHHHHHHH---HHSSTTCSEEEEEEEESSCCHHHHHHHH------TTCCEEECCGG-------G-----
T ss_pred CcEEEEEEeCChHHHHHHH---HHHhccCCCeEEEEEeCCchHHHHHHHH------cCCCEEEeCcc-------c-----
Confidence 6799999988765444444 33332 3568887655433332222211 24665553210 0
Q ss_pred CCCCCcCcHHHHHHHHHHchHHHHHHHHhcCCCCeEEEecCCC-chhHHHHhHcCCCcEEEecc
Q 039701 87 DKLPSMALLPKFFAAIEMLRLPLETLFKEIQPKPGCLISDVCL-PWTVSSACKFNVPRIVFHGF 149 (476)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~D~vI~D~~~-~~~~~~A~~~giP~v~~~~~ 149 (476)
.. + -....+++.+.+++ .++|+||+-.+. .-...+-..+...++-++++
T Consensus 71 --~~--~--------r~~~d~~~~~~l~~--~~~Dlivlagy~~iL~~~~l~~~~~~~iNiHpS 120 (215)
T 3da8_A 71 --HP--S--------RDAWDVAITAATAA--HEPDLVVSAGFMRILGPQFLSRFYGRTLNTHPA 120 (215)
T ss_dssp --SS--S--------HHHHHHHHHHHHHT--TCCSEEEEEECCSCCCHHHHHHHTTTEEEEESS
T ss_pred --cc--c--------hhhhhHHHHHHHHh--hCCCEEEEcCchhhCCHHHHhhccCCeEEeCcc
Confidence 00 0 01123456677777 899998876653 44445555555556654333
No 99
>3qxc_A Dethiobiotin synthetase; DTBS, structural genomics, ATP BIND biology, protein structure initiative, midwest center for S genomics, MCSG; HET: ATP; 1.34A {Helicobacter pylori} PDB: 3mle_A* 3qxh_A* 3qxj_A* 3qxs_A* 3qxx_A* 3qy0_A* 2qmo_A
Probab=54.04 E-value=1.1e+02 Score=26.66 Aligned_cols=45 Identities=9% Similarity=-0.025 Sum_probs=32.1
Q ss_pred hHHHHHHHHhcCCCCeEEEecCCC---------chhHHHHhHcCCCcEEEecch
Q 039701 106 RLPLETLFKEIQPKPGCLISDVCL---------PWTVSSACKFNVPRIVFHGFS 150 (476)
Q Consensus 106 ~~~l~~~l~~~~~~~D~vI~D~~~---------~~~~~~A~~~giP~v~~~~~~ 150 (476)
.+.+.+.++++..++|+||.|... .....+|+.++.|++.+...-
T Consensus 118 ~~~I~~~~~~l~~~~D~vlIEGagGl~~pl~~~~~~adlA~~l~~pVILV~~~~ 171 (242)
T 3qxc_A 118 TDNLTQRLHNFTKTYDLVIVEGAGGLCVPITLEENMLDFALKLKAKMLLISHDN 171 (242)
T ss_dssp HHHHHHHHHHGGGTCSEEEEECCSCTTCBSSSSCBHHHHHHHHTCEEEEEECCS
T ss_pred HHHHHHHHHHHHhcCCEEEEECCCCccccccccchHHHHHHHcCCCEEEEEcCC
Confidence 345556665555689999988731 134789999999999976653
No 100
>3av3_A Phosphoribosylglycinamide formyltransferase; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; HET: MSE; 1.70A {Geobacillus kaustophilus}
Probab=53.94 E-value=1e+02 Score=26.25 Aligned_cols=106 Identities=8% Similarity=0.020 Sum_probs=58.6
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHHC--CCeEEEEeCC-cchhhhhhHhhhcccCCCceEEEEeeCCCcccCCCCCCCC
Q 039701 9 LHFILFPFLAQGHMIPMIDIARLLAQH--GALVTIVTTP-MNAARFQNVIERGIQSGLRIQVIEFYFPCQEVGLPEGCES 85 (476)
Q Consensus 9 ~~vl~~~~p~~GHv~P~l~La~~L~~r--GH~Vt~~~~~-~~~~~~~~~~~~~~~~g~~i~~~~i~~~~~~~~~~~~~~~ 85 (476)
+||+++.+++.+ -+..+.+.|.+. +|+|..+.+. ......+.+.+ .++.+..++. ...
T Consensus 4 ~ki~vl~sG~g~---~~~~~l~~l~~~~l~~~I~~Vit~~~~~~v~~~A~~------~gIp~~~~~~--------~~~-- 64 (212)
T 3av3_A 4 KRLAVFASGSGT---NFQAIVDAAKRGDLPARVALLVCDRPGAKVIERAAR------ENVPAFVFSP--------KDY-- 64 (212)
T ss_dssp EEEEEECCSSCH---HHHHHHHHHHTTCCCEEEEEEEESSTTCHHHHHHHH------TTCCEEECCG--------GGS--
T ss_pred cEEEEEEECCcH---HHHHHHHHHHhCCCCCeEEEEEeCCCCcHHHHHHHH------cCCCEEEeCc--------ccc--
Confidence 478888777644 356677778777 7998866544 33222222211 1455554321 000
Q ss_pred CCCCCCcCcHHHHHHHHHHchHHHHHHHHhcCCCCeEEEecCCC-chhHHHHhHcCCCcEEEecc
Q 039701 86 WDKLPSMALLPKFFAAIEMLRLPLETLFKEIQPKPGCLISDVCL-PWTVSSACKFNVPRIVFHGF 149 (476)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~D~vI~D~~~-~~~~~~A~~~giP~v~~~~~ 149 (476)
. + -....+.+.+.+++ .+||+||+-.+. .-...+-..+...++-++++
T Consensus 65 ----~--~--------~~~~~~~~~~~l~~--~~~Dliv~a~y~~il~~~~l~~~~~~~iNiHpS 113 (212)
T 3av3_A 65 ----P--S--------KAAFESEILRELKG--RQIDWIALAGYMRLIGPTLLSAYEGKIVNIHPS 113 (212)
T ss_dssp ----S--S--------HHHHHHHHHHHHHH--TTCCEEEESSCCSCCCHHHHHHTTTCEEEEESS
T ss_pred ----c--c--------hhhhHHHHHHHHHh--cCCCEEEEchhhhhCCHHHHhhhcCCEEEEecC
Confidence 0 0 11122345666777 899999977654 44555666666667765443
No 101
>1g63_A Epidermin modifying enzyme EPID; alpha, beta protein, rossmann like fold, oxidoreductase; HET: FMN; 2.50A {Staphylococcus epidermidis} SCOP: c.34.1.1 PDB: 1g5q_A*
Probab=53.40 E-value=11 Score=31.71 Aligned_cols=40 Identities=15% Similarity=0.105 Sum_probs=33.4
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHHCCCeEEEEeCCcchh
Q 039701 9 LHFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTTPMNAA 49 (476)
Q Consensus 9 ~~vl~~~~p~~GHv~P~l~La~~L~~rGH~Vt~~~~~~~~~ 49 (476)
.||++.-.|+.|=+ =...|.+.|.++|++|.++.++...+
T Consensus 3 k~IllgvTGs~aa~-k~~~l~~~L~~~g~~V~vv~T~~A~~ 42 (181)
T 1g63_A 3 GKLLICATASINVI-NINHYIVELKQHFDEVNILFSPSSKN 42 (181)
T ss_dssp CCEEEEECSCGGGG-GHHHHHHHHTTTSSCEEEEECGGGGG
T ss_pred CEEEEEEECHHHHH-HHHHHHHHHHHCCCEEEEEEchhHHH
Confidence 47888888887766 57899999999999999999885444
No 102
>3vot_A L-amino acid ligase, BL00235; ATP-grAsp motif, ATP-binding; HET: ADP PG4; 1.80A {Bacillus licheniformis}
Probab=52.78 E-value=46 Score=31.88 Aligned_cols=35 Identities=23% Similarity=0.255 Sum_probs=24.7
Q ss_pred HHHHHHHHhcCCCCeEEEec--CCCchhHHHHhHcCCCc
Q 039701 107 LPLETLFKEIQPKPGCLISD--VCLPWTVSSACKFNVPR 143 (476)
Q Consensus 107 ~~l~~~l~~~~~~~D~vI~D--~~~~~~~~~A~~~giP~ 143 (476)
+.+.++.++ .++|.|+.- .....+..+|+.+|+|.
T Consensus 65 ~~~~~~~~~--~~id~V~~~~e~~~~~~a~l~e~lglpg 101 (425)
T 3vot_A 65 DVVRQTFVE--FPFDGVMTLFEPALPFTAKAAEALNLPG 101 (425)
T ss_dssp HHHHHHHHH--SCCSEEECCCGGGHHHHHHHHHHTTCSS
T ss_pred HHHHHhhhh--cCCCEEEECCchhHHHHHHHHHHcCCCC
Confidence 345566666 799999853 33355678899999994
No 103
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=51.43 E-value=23 Score=32.49 Aligned_cols=34 Identities=21% Similarity=0.136 Sum_probs=27.8
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHHCCCeEEEEeCCc
Q 039701 8 QLHFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTTPM 46 (476)
Q Consensus 8 ~~~vl~~~~p~~GHv~P~l~La~~L~~rGH~Vt~~~~~~ 46 (476)
.+||+++-.|+.|- .+|..|++.||+|+++....
T Consensus 2 ~mkI~IiGaGaiG~-----~~a~~L~~~g~~V~~~~r~~ 35 (312)
T 3hn2_A 2 SLRIAIVGAGALGL-----YYGALLQRSGEDVHFLLRRD 35 (312)
T ss_dssp --CEEEECCSTTHH-----HHHHHHHHTSCCEEEECSTT
T ss_pred CCEEEEECcCHHHH-----HHHHHHHHCCCeEEEEEcCc
Confidence 35899999999984 56889999999999998764
No 104
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=51.29 E-value=11 Score=30.37 Aligned_cols=33 Identities=27% Similarity=0.377 Sum_probs=26.3
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHHCCCeEEEEeCC
Q 039701 8 QLHFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTTP 45 (476)
Q Consensus 8 ~~~vl~~~~p~~GHv~P~l~La~~L~~rGH~Vt~~~~~ 45 (476)
+.||+++-. |++- ..+++.|.++||+|+++...
T Consensus 3 ~~~vlI~G~---G~vG--~~la~~L~~~g~~V~vid~~ 35 (153)
T 1id1_A 3 KDHFIVCGH---SILA--INTILQLNQRGQNVTVISNL 35 (153)
T ss_dssp CSCEEEECC---SHHH--HHHHHHHHHTTCCEEEEECC
T ss_pred CCcEEEECC---CHHH--HHHHHHHHHCCCCEEEEECC
Confidence 468998854 5444 68899999999999999864
No 105
>1meo_A Phosophoribosylglycinamide formyltransferase; purine biosynthesis; 1.72A {Homo sapiens} SCOP: c.65.1.1 PDB: 1njs_A* 1rbm_A* 1rbq_A* 1rby_A* 1rbz_A* 1rc0_A* 1rc1_A* 1zly_A* 1zlx_A* 1mej_B 1men_A*
Probab=51.13 E-value=1.1e+02 Score=26.09 Aligned_cols=107 Identities=9% Similarity=-0.036 Sum_probs=55.8
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHHC--CCeEEEEeCCcchhhhhhHhhhcccCCCceEEEEeeCCCcccCCCCCCCCC
Q 039701 9 LHFILFPFLAQGHMIPMIDIARLLAQH--GALVTIVTTPMNAARFQNVIERGIQSGLRIQVIEFYFPCQEVGLPEGCESW 86 (476)
Q Consensus 9 ~~vl~~~~p~~GHv~P~l~La~~L~~r--GH~Vt~~~~~~~~~~~~~~~~~~~~~g~~i~~~~i~~~~~~~~~~~~~~~~ 86 (476)
+||+++.++..+.+.. |...+.+. +|+|..+.+........+... ..++.+..++. ...
T Consensus 1 ~riaVl~SG~Gs~L~a---Li~~~~~~~~~~~I~~Vvs~~~~~~~~~~A~-----~~gIp~~~~~~--------~~~--- 61 (209)
T 1meo_A 1 ARVAVLISGTGSNLQA---LIDSTREPNSSAQIDIVISNKAAVAGLDKAE-----RAGIPTRVINH--------KLY--- 61 (209)
T ss_dssp CEEEEEESSSCTTHHH---HHHHHHSTTCSCEEEEEEESSTTCHHHHHHH-----HTTCCEEECCG--------GGS---
T ss_pred CeEEEEEECCchHHHH---HHHHHhcCCCCcEEEEEEeCCCChHHHHHHH-----HcCCCEEEECc--------ccc---
Confidence 3788888777665444 44555544 799987755432221211111 11455543320 000
Q ss_pred CCCCCcCcHHHHHHHHHHchHHHHHHHHhcCCCCeEEEecCCC-chhHHHHhHcCCCcEEEecc
Q 039701 87 DKLPSMALLPKFFAAIEMLRLPLETLFKEIQPKPGCLISDVCL-PWTVSSACKFNVPRIVFHGF 149 (476)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~D~vI~D~~~-~~~~~~A~~~giP~v~~~~~ 149 (476)
. + .....+.+.+.+++ .+||+||+-.+. .-...+-..+...++-++++
T Consensus 62 ---~--~--------r~~~~~~~~~~l~~--~~~Dliv~a~y~~il~~~~l~~~~~~~iNiHpS 110 (209)
T 1meo_A 62 ---K--N--------RVEFDSAIDLVLEE--FSIDIVCLAGFMRILSGPFVQKWNGKMLNIHPS 110 (209)
T ss_dssp ---S--S--------HHHHHHHHHHHHHH--TTCCEEEEESCCSCCCHHHHHHTTTSEEEEESS
T ss_pred ---C--c--------hhhhhHHHHHHHHh--cCCCEEEEcchhhhCCHHHHhhhcCCEEEEccC
Confidence 0 0 01122345667777 899999876654 44455556666667765443
No 106
>2q6t_A DNAB replication FORK helicase; hydrolase; 2.90A {Thermus aquaticus}
Probab=50.78 E-value=1.1e+02 Score=29.34 Aligned_cols=43 Identities=28% Similarity=0.185 Sum_probs=35.5
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHH-CCCeEEEEeCCcchhhhh
Q 039701 10 HFILFPFLAQGHMIPMIDIARLLAQ-HGALVTIVTTPMNAARFQ 52 (476)
Q Consensus 10 ~vl~~~~p~~GHv~P~l~La~~L~~-rGH~Vt~~~~~~~~~~~~ 52 (476)
=+++...|+.|-..-++.+|...+. .|..|.+++.+...+.+.
T Consensus 202 l~ii~G~pg~GKT~lal~ia~~~a~~~g~~vl~~slE~~~~~l~ 245 (444)
T 2q6t_A 202 LNIIAARPAMGKTAFALTIAQNAALKEGVGVGIYSLEMPAAQLT 245 (444)
T ss_dssp EEEEEECTTSCHHHHHHHHHHHHHHTTCCCEEEEESSSCHHHHH
T ss_pred EEEEEeCCCCCHHHHHHHHHHHHHHhCCCeEEEEECCCCHHHHH
Confidence 4678888999999999999999987 499999999876655443
No 107
>2zts_A Putative uncharacterized protein PH0186; KAIC like protein, ATP-binding, nucleotide-binding, ATP- binding protein; HET: ADP; 2.07A {Pyrococcus horikoshii}
Probab=50.77 E-value=21 Score=31.03 Aligned_cols=45 Identities=13% Similarity=-0.015 Sum_probs=35.1
Q ss_pred EEEEEcCCCccChHHHHHHHHHH-HHCCCeEEEEeCCcchhhhhhH
Q 039701 10 HFILFPFLAQGHMIPMIDIARLL-AQHGALVTIVTTPMNAARFQNV 54 (476)
Q Consensus 10 ~vl~~~~p~~GHv~P~l~La~~L-~~rGH~Vt~~~~~~~~~~~~~~ 54 (476)
=+++...|+.|-..-++.+|... .+.|..|.+++.+...+.+...
T Consensus 32 l~~i~G~pG~GKT~l~l~~~~~~~~~~~~~v~~~s~E~~~~~~~~~ 77 (251)
T 2zts_A 32 TVLLTGGTGTGKTTFAAQFIYKGAEEYGEPGVFVTLEERARDLRRE 77 (251)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHHHHHHCCCEEEEESSSCHHHHHHH
T ss_pred EEEEEeCCCCCHHHHHHHHHHHHHHhcCCCceeecccCCHHHHHHH
Confidence 47788889999999999988764 5568899999887766655443
No 108
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=50.36 E-value=23 Score=32.53 Aligned_cols=41 Identities=22% Similarity=0.234 Sum_probs=31.3
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHHCCCeEEEEeCCcchhhhhhH
Q 039701 8 QLHFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTTPMNAARFQNV 54 (476)
Q Consensus 8 ~~~vl~~~~p~~GHv~P~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~ 54 (476)
++||+++-.|+.|- .+|..|++.||+|+++.... .+.+++.
T Consensus 2 ~mkI~IiGaGaiG~-----~~a~~L~~~g~~V~~~~r~~-~~~i~~~ 42 (320)
T 3i83_A 2 SLNILVIGTGAIGS-----FYGALLAKTGHCVSVVSRSD-YETVKAK 42 (320)
T ss_dssp -CEEEEESCCHHHH-----HHHHHHHHTTCEEEEECSTT-HHHHHHH
T ss_pred CCEEEEECcCHHHH-----HHHHHHHhCCCeEEEEeCCh-HHHHHhC
Confidence 46899999888884 57889999999999998764 3444443
No 109
>3bul_A Methionine synthase; transferase, reactivation conformation, cobalamin, intermodular interactions, amino-acid biosynthesis, cobalt; HET: B12; 2.30A {Escherichia coli} SCOP: a.46.1.1 c.23.6.1 d.173.1.1 PDB: 3iv9_A* 3iva_A* 1k7y_A* 1k98_A* 1bmt_A*
Probab=47.60 E-value=33 Score=34.50 Aligned_cols=48 Identities=8% Similarity=-0.002 Sum_probs=40.3
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHHCCCeEEEEeCCcchhhhhhHh
Q 039701 8 QLHFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTTPMNAARFQNVI 55 (476)
Q Consensus 8 ~~~vl~~~~p~~GHv~P~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~ 55 (476)
+.+|++.+.++..|-....-++..|..+|++|+.+...--.+.+....
T Consensus 98 ~~kVLlatv~GD~HdiG~~iva~~L~~~G~eVi~LG~~vP~e~iv~aa 145 (579)
T 3bul_A 98 NGKMVIATVKGDVHDIGKNIVGVVLQCNNYEIVDLGVMVPAEKILRTA 145 (579)
T ss_dssp SCEEEEEEBTTCCCCHHHHHHHHHHHTTTCEEEECCSSBCHHHHHHHH
T ss_pred CCeEEEEECCCCCchHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHH
Confidence 679999999999999999999999999999999987655444444443
No 110
>3io3_A DEHA2D07832P; chaperone, membrane traffic, ATPase; HET: ADP; 1.80A {Debaryomyces hansenii}
Probab=46.73 E-value=79 Score=29.42 Aligned_cols=38 Identities=21% Similarity=0.192 Sum_probs=31.7
Q ss_pred cEEEEEc-CCCccChHHHHHHHHHHH--HCCCeEEEEeCCc
Q 039701 9 LHFILFP-FLAQGHMIPMIDIARLLA--QHGALVTIVTTPM 46 (476)
Q Consensus 9 ~~vl~~~-~p~~GHv~P~l~La~~L~--~rGH~Vt~~~~~~ 46 (476)
.+|++++ -|+-|-..-..+||..|+ ++|++|.++....
T Consensus 18 ~~i~~~~gkGGvGKTt~a~~lA~~la~~~~g~~vllid~D~ 58 (348)
T 3io3_A 18 LKWIFVGGKGGVGKTTTSSSVAVQLALAQPNEQFLLISTDP 58 (348)
T ss_dssp CSEEEEECSTTSSHHHHHHHHHHHHHHHCTTSCEEEEECCS
T ss_pred cEEEEEeCCCCCcHHHHHHHHHHHHHHhcCCCeEEEEECCC
Confidence 4565554 468899999999999999 8999999998764
No 111
>4e5s_A MCCFLIKE protein (BA_5613); structural genomics, center for structural genomi infectious diseases, csgid, serine peptidase S66; 1.95A {Bacillus anthracis}
Probab=46.44 E-value=32 Score=31.92 Aligned_cols=74 Identities=15% Similarity=0.156 Sum_probs=56.4
Q ss_pred CCHHHHHHHHHHHHhCCCCeEEEEcCCCCCchhHHHHhcCCCeEeeccccHHHhhhCCCceeeecccChhhHHHHHH--c
Q 039701 292 CSTRQLIELGLGLEATKKPFIWVIRPGDQAFEKFEERIEGRGLLIRGWAPQVVILSHPAIGGFLTHCGWNSVLEAVS--N 369 (476)
Q Consensus 292 ~~~~~~~~i~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~nv~~~~~vpq~~ll~~~~~~~~I~HgG~~s~~eal~--~ 369 (476)
.+.+....|.+++.+...+.||.+.++.. -..+.+++++..+-.+|.. ||=+.-...++-+++ .
T Consensus 62 ~d~~Ra~dL~~a~~Dp~i~aI~~~rGG~g------------~~rlL~~lD~~~i~~~PK~--~~GySDiTaL~~al~~~~ 127 (331)
T 4e5s_A 62 SISSRVQDLHEAFRDPNVKAILTTLGGYN------------SNGLLKYLDYDLIRENPKF--FCGYSDITALNNAIYTKT 127 (331)
T ss_dssp CHHHHHHHHHHHHHCTTEEEEEESCCCSC------------GGGGGGGCCHHHHHTSCCE--EEECGGGHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHhhCCCCCEEEEcccccc------------HHHHHhhcChhHHHhCCeE--EEEecchHHHHHHHHHhh
Confidence 34677778999999999999999988752 2344567777777777888 888888888888887 5
Q ss_pred CCCEeccccc
Q 039701 370 GLPMVTWPFF 379 (476)
Q Consensus 370 GvP~l~~P~~ 379 (476)
|++.+.=|..
T Consensus 128 G~~t~hGp~~ 137 (331)
T 4e5s_A 128 GLVTYSGPHF 137 (331)
T ss_dssp CBCEEECCCG
T ss_pred CCcEEEccch
Confidence 8877766653
No 112
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=46.23 E-value=41 Score=31.45 Aligned_cols=27 Identities=33% Similarity=0.494 Sum_probs=21.3
Q ss_pred CCCceeeecccChhhH---HHHHHcCCCEecc
Q 039701 348 HPAIGGFLTHCGWNSV---LEAVSNGLPMVTW 376 (476)
Q Consensus 348 ~~~~~~~I~HgG~~s~---~eal~~GvP~l~~ 376 (476)
+|++ +|++||.-++ ..|-..|+|.++.
T Consensus 92 ~PDv--Vi~~g~~~s~p~~laA~~~~iP~vih 121 (365)
T 3s2u_A 92 RPVC--VLGLGGYVTGPGGLAARLNGVPLVIH 121 (365)
T ss_dssp CCSE--EEECSSSTHHHHHHHHHHTTCCEEEE
T ss_pred CCCE--EEEcCCcchHHHHHHHHHcCCCEEEE
Confidence 6788 9999997654 4567789999863
No 113
>3u7q_B Nitrogenase molybdenum-iron protein beta chain; multiple rossmann fold domains, reductase, nitrogen fixing, oxidoreductase; HET: HCA ICS 1CL CLF; 1.00A {Azotobacter vinelandii} SCOP: c.92.2.3 PDB: 1fp4_B* 1g21_B* 1g20_B* 1m1n_B* 1l5h_B* 1m1y_B* 1m34_B* 1n2c_B* 2afh_B* 2afi_B* 2afk_B* 2min_B* 3k1a_B* 3min_B*
Probab=46.03 E-value=95 Score=30.78 Aligned_cols=34 Identities=24% Similarity=0.205 Sum_probs=25.4
Q ss_pred HHHHHHHhcCCCCeEEEecCCCchhHHHHhHc-------CCCcEEE
Q 039701 108 PLETLFKEIQPKPGCLISDVCLPWTVSSACKF-------NVPRIVF 146 (476)
Q Consensus 108 ~l~~~l~~~~~~~D~vI~D~~~~~~~~~A~~~-------giP~v~~ 146 (476)
++++.+++ .+||++|..... ..+|+++ |||++.+
T Consensus 429 ~l~~~i~~--~~pDLlig~s~~---k~~a~~~~~~~~~~giP~iri 469 (523)
T 3u7q_B 429 HLRSLVFT--DKPDFMIGNSYG---KFIQRDTLHKGKEFEVPLIRI 469 (523)
T ss_dssp HHHHHHHH--TCCSEEEECTTH---HHHHHHHHHHCGGGCCCEEEC
T ss_pred HHHHHHHh--cCCCEEEECccH---HHHHHHhhcccccCCCceEEe
Confidence 45667777 799999999753 3466666 9999973
No 114
>3mcu_A Dipicolinate synthase, B chain; NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Bacillus cereus}
Probab=45.57 E-value=25 Score=30.08 Aligned_cols=39 Identities=13% Similarity=-0.130 Sum_probs=31.7
Q ss_pred CcEEEEEcCCCccChHH-HHHHHHHHHHCCCeEEEEeCCcc
Q 039701 8 QLHFILFPFLAQGHMIP-MIDIARLLAQHGALVTIVTTPMN 47 (476)
Q Consensus 8 ~~~vl~~~~p~~GHv~P-~l~La~~L~~rGH~Vt~~~~~~~ 47 (476)
..||++.-.|+ +..+- ...|.+.|.++|++|.++.++..
T Consensus 5 ~k~IllgiTGs-iaayk~~~~ll~~L~~~g~eV~vv~T~~A 44 (207)
T 3mcu_A 5 GKRIGFGFTGS-HCTYEEVMPHLEKLIAEGAEVRPVVSYTV 44 (207)
T ss_dssp TCEEEEEECSC-GGGGTTSHHHHHHHHHTTCEEEEEECC--
T ss_pred CCEEEEEEECh-HHHHHHHHHHHHHHHhCCCEEEEEEehHH
Confidence 46899988887 45665 88999999999999999988743
No 115
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=45.39 E-value=1.8e+02 Score=26.45 Aligned_cols=89 Identities=11% Similarity=0.085 Sum_probs=51.7
Q ss_pred HHHHHHHHHHHCCCeEEEEeCCcchhhhhhHhhhcccCCCceEEEEeeCCCcccCCCCCCCCCCCCCCcCcHHHHHHHHH
Q 039701 24 PMIDIARLLAQHGALVTIVTTPMNAARFQNVIERGIQSGLRIQVIEFYFPCQEVGLPEGCESWDKLPSMALLPKFFAAIE 103 (476)
Q Consensus 24 P~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~g~~i~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (476)
-+..|++.|.++|++|.++..+...+..+........ ....+... +.. . .
T Consensus 201 ~~~~l~~~L~~~~~~vvl~g~~~e~~~~~~i~~~~~~-~~~~~~~~---------l~g---------~-~---------- 250 (348)
T 1psw_A 201 HYAELAKQLIDEGYQVVLFGSAKDHEAGNEILAALNT-EQQAWCRN---------LAG---------E-T---------- 250 (348)
T ss_dssp HHHHHHHHHHHTTCEEEECCCGGGHHHHHHHHTTSCH-HHHTTEEE---------CTT---------T-S----------
T ss_pred HHHHHHHHHHHCCCeEEEEeChhhHHHHHHHHHhhhh-ccccceEe---------ccC---------c-C----------
Confidence 6889999999999999888766554443333210000 00000110 000 0 0
Q ss_pred HchHHHHHHHHhcCCCCeEEEecCCCchhHHHHhHcCCCcEEEecc
Q 039701 104 MLRLPLETLFKEIQPKPGCLISDVCLPWTVSSACKFNVPRIVFHGF 149 (476)
Q Consensus 104 ~~~~~l~~~l~~~~~~~D~vI~D~~~~~~~~~A~~~giP~v~~~~~ 149 (476)
...++..+++ +.|++|+-. .....+|..+|+|+|.++..
T Consensus 251 -sl~e~~ali~----~a~l~I~~D--sg~~HlAaa~g~P~v~lfg~ 289 (348)
T 1psw_A 251 -QLDQAVILIA----ACKAIVTND--SGLMHVAAALNRPLVALYGP 289 (348)
T ss_dssp -CHHHHHHHHH----TSSEEEEES--SHHHHHHHHTTCCEEEEESS
T ss_pred -CHHHHHHHHH----hCCEEEecC--CHHHHHHHHcCCCEEEEECC
Confidence 1224455664 589988643 46688899999999997654
No 116
>1qzu_A Hypothetical protein MDS018; alpha-beta sandwich, lyase; HET: FMN; 2.91A {Homo sapiens} SCOP: c.34.1.1
Probab=45.32 E-value=17 Score=31.15 Aligned_cols=41 Identities=17% Similarity=0.119 Sum_probs=32.6
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHH-CCCeEEEEeCCcchh
Q 039701 8 QLHFILFPFLAQGHMIPMIDIARLLAQ-HGALVTIVTTPMNAA 49 (476)
Q Consensus 8 ~~~vl~~~~p~~GHv~P~l~La~~L~~-rGH~Vt~~~~~~~~~ 49 (476)
++||++...|+.+=+. ...|.+.|.+ +|++|.++.++...+
T Consensus 19 ~k~IllgvTGsiaa~k-~~~lv~~L~~~~g~~V~vv~T~~A~~ 60 (206)
T 1qzu_A 19 KFHVLVGVTGSVAALK-LPLLVSKLLDIPGLEVAVVTTERAKH 60 (206)
T ss_dssp SEEEEEEECSSGGGGT-HHHHHHHHC---CEEEEEEECTGGGG
T ss_pred CCEEEEEEeChHHHHH-HHHHHHHHhcccCCEEEEEECHhHHH
Confidence 5789999999888554 5899999999 899999999885444
No 117
>1qgu_B Protein (nitrogenase molybdenum iron protein); biological nitrogen fixation, nitrogen metabolism, molybdoenzymes, electron transfer; HET: HCA CFM CLF; 1.60A {Klebsiella pneumoniae} SCOP: c.92.2.3 PDB: 1h1l_B* 1qh1_B* 1qh8_B*
Probab=44.66 E-value=90 Score=30.91 Aligned_cols=34 Identities=18% Similarity=0.223 Sum_probs=26.4
Q ss_pred HHHHHHHhcCCCCeEEEecCCCchhHHHHhHc-------CCCcEEE
Q 039701 108 PLETLFKEIQPKPGCLISDVCLPWTVSSACKF-------NVPRIVF 146 (476)
Q Consensus 108 ~l~~~l~~~~~~~D~vI~D~~~~~~~~~A~~~-------giP~v~~ 146 (476)
++.+.+++ .+||++|.+.. ...+|+++ |||++.+
T Consensus 425 ~l~~~i~~--~~pDLiig~~~---~~~~a~~~~~~g~~~gip~v~i 465 (519)
T 1qgu_B 425 HFRSLMFT--RQPDFMIGNSY---GKFIQRDTLAKGKAFEVPLIRL 465 (519)
T ss_dssp HHHHHHHH--HCCSEEEECGG---GHHHHHHHHHHCGGGCCCEEEC
T ss_pred HHHHHHhh--cCCCEEEECcc---hHHHHHHhhcccccCCCCeEEe
Confidence 44666666 68999999864 57788888 9999873
No 118
>1v5e_A Pyruvate oxidase; oxidoreductase, flavoprotein; HET: FAD; 1.60A {Aerococcus viridans} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 2dji_A* 1v5f_A* 1v5g_A*
Probab=44.07 E-value=91 Score=31.41 Aligned_cols=79 Identities=15% Similarity=0.115 Sum_probs=43.4
Q ss_pred HHHHHHHHhCCCCeEEEEcCCCCCchhHHHHhcC--CCeEeec--------cccHHHhhhCCCceeeecccC------hh
Q 039701 298 IELGLGLEATKKPFIWVIRPGDQAFEKFEERIEG--RGLLIRG--------WAPQVVILSHPAIGGFLTHCG------WN 361 (476)
Q Consensus 298 ~~i~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~--~nv~~~~--------~vpq~~ll~~~~~~~~I~HgG------~~ 361 (476)
+.|++.|++.+++.++.+.+... ..+-+.+.. +.+.... +.-...-......+++++|.| .+
T Consensus 8 ~~lv~~L~~~GV~~vfg~PG~~~--~~l~~al~~~~~~i~~i~~~~E~~Aa~~A~GyAr~tgk~~v~~~tsGpG~~N~~~ 85 (590)
T 1v5e_A 8 LAVMKILESWGADTIYGIPSGTL--SSLMDAMGEEENNVKFLQVKHEEVGAMAAVMQSKFGGNLGVTVGSGGPGASHLIN 85 (590)
T ss_dssp HHHHHHHHHTTCCEEEECCCTTT--HHHHTTSSSTTCCCEEEECSSHHHHHHHHHHHHHTTCCCCEEEECTTHHHHTTHH
T ss_pred HHHHHHHHHcCCCEEEEecCCch--HHHHHHHHhcCCCCeEEeeCCHHHHHHHHHHHHHHHCCCEEEEeCcChHHHHHHH
Confidence 34666777777777776655431 112111111 1233222 111111122223344999998 56
Q ss_pred hHHHHHHcCCCEecccc
Q 039701 362 SVLEAVSNGLPMVTWPF 378 (476)
Q Consensus 362 s~~eal~~GvP~l~~P~ 378 (476)
.+.+|-+.++|+|++--
T Consensus 86 gl~~A~~~~vPll~Itg 102 (590)
T 1v5e_A 86 GLYDAAMDNIPVVAILG 102 (590)
T ss_dssp HHHHHHHHTCCEEEEEE
T ss_pred HHHHHHhcCCCEEEEcC
Confidence 88999999999999843
No 119
>4ds3_A Phosphoribosylglycinamide formyltransferase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.85A {Brucella melitensis BV}
Probab=42.74 E-value=77 Score=27.08 Aligned_cols=110 Identities=16% Similarity=0.072 Sum_probs=0.0
Q ss_pred CCCCCCCCcEEEEEcCCCccChHHHHHHHHHHHHCC--CeEEEEeCCcchhhhhhHhhhcccCCCceEEEEeeCCCcccC
Q 039701 1 MASQAGSQLHFILFPFLAQGHMIPMIDIARLLAQHG--ALVTIVTTPMNAARFQNVIERGIQSGLRIQVIEFYFPCQEVG 78 (476)
Q Consensus 1 m~~~~~~~~~vl~~~~p~~GHv~P~l~La~~L~~rG--H~Vt~~~~~~~~~~~~~~~~~~~~~g~~i~~~~i~~~~~~~~ 78 (476)
|. ++||+++.++..+. +.+|.+.+.+.+ ++|..+.+..-.....+..+.. ++.+..++
T Consensus 5 m~-----~~ri~vl~SG~gsn---l~all~~~~~~~l~~~I~~Visn~~~a~~l~~A~~~-----gIp~~~~~------- 64 (209)
T 4ds3_A 5 MK-----RNRVVIFISGGGSN---MEALIRAAQAPGFPAEIVAVFSDKAEAGGLAKAEAA-----GIATQVFK------- 64 (209)
T ss_dssp -C-----CEEEEEEESSCCHH---HHHHHHHHTSTTCSEEEEEEEESCTTCTHHHHHHHT-----TCCEEECC-------
T ss_pred CC-----CccEEEEEECCcHH---HHHHHHHHHcCCCCcEEEEEEECCcccHHHHHHHHc-----CCCEEEeC-------
Q ss_pred CCCCCCCCCCCCCcCcHHHHHHHHHHchHHHHHHHHhcCCCCeEEEecCCC-chhHHHHhHcCCCcEEEecc
Q 039701 79 LPEGCESWDKLPSMALLPKFFAAIEMLRLPLETLFKEIQPKPGCLISDVCL-PWTVSSACKFNVPRIVFHGF 149 (476)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~D~vI~D~~~-~~~~~~A~~~giP~v~~~~~ 149 (476)
..-+..-....+.+.+.+++ .+||+||+-.+. .-...+-..+.-.++-++++
T Consensus 65 -----------------~~~~~~r~~~d~~~~~~l~~--~~~Dliv~agy~~il~~~~l~~~~~~~iNiHpS 117 (209)
T 4ds3_A 65 -----------------RKDFASKEAHEDAILAALDV--LKPDIICLAGYMRLLSGRFIAPYEGRILNIHPS 117 (209)
T ss_dssp -----------------GGGSSSHHHHHHHHHHHHHH--HCCSEEEESSCCSCCCHHHHGGGTTCEEEEESS
T ss_pred -----------------ccccCCHHHHHHHHHHHHHh--cCCCEEEEeccccCcCHHHHhhccCCeEEECCc
No 120
>3ujp_A Mn transporter subunit; manganese binding protein, metal binding protein; 2.70A {Synechocystis SP} PDB: 1xvl_A 3v63_A
Probab=42.62 E-value=87 Score=28.55 Aligned_cols=34 Identities=15% Similarity=0.069 Sum_probs=24.0
Q ss_pred hHHHHHHHHHhc--CChhhHHHHHHHHHHHHHHHHH
Q 039701 420 EDVKKAINMLMD--EGEERDERRRRAREYGETAKTA 453 (476)
Q Consensus 420 ~~l~~~i~~ll~--~~~~~~~~r~~a~~l~~~~~~~ 453 (476)
..+.+.|.+.|. ||+.++.|++|++++.+++.+-
T Consensus 140 ~~~a~~I~~~L~~~DP~~a~~Y~~Na~~~~~~L~~L 175 (307)
T 3ujp_A 140 LVYVENIRQAFVELDPDNAKYYNANAAVYSEQLKAI 175 (307)
T ss_dssp HHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCchhHHHHHHHHHHHHHHHHHH
Confidence 334444444442 6888999999999999987743
No 121
>4h1h_A LMO1638 protein; MCCF-like, csgid, MCCF homolog, structural genomics, niaid, institute of allergy and infectious diseases; 2.46A {Listeria monocytogenes}
Probab=41.87 E-value=40 Score=31.14 Aligned_cols=73 Identities=10% Similarity=0.076 Sum_probs=53.2
Q ss_pred CCHHHHHHHHHHHHhCCCCeEEEEcCCCCCchhHHHHhcCCCeEeeccccHHHhhhCCCceeeecccChhhHHHHHH--c
Q 039701 292 CSTRQLIELGLGLEATKKPFIWVIRPGDQAFEKFEERIEGRGLLIRGWAPQVVILSHPAIGGFLTHCGWNSVLEAVS--N 369 (476)
Q Consensus 292 ~~~~~~~~i~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~nv~~~~~vpq~~ll~~~~~~~~I~HgG~~s~~eal~--~ 369 (476)
.+.+....|.+++.+...+.||...++.. -..+.++++...+-.+|.. ||=+.-..+++-+++ .
T Consensus 62 td~~Ra~dL~~a~~Dp~i~aI~~~rGG~g------------~~rlL~~LD~~~i~~~PK~--~~GySDiT~L~~al~~~~ 127 (327)
T 4h1h_A 62 SIRSRVADIHEAFNDSSVKAILTVIGGFN------------SNQLLPYLDYDLISENPKI--LCGFSDITALATAIYTQT 127 (327)
T ss_dssp CHHHHHHHHHHHHHCTTEEEEEESCCCSC------------GGGGGGGCCHHHHHHSCCE--EEECTTHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHhhCCCCCEEEEcCCchh------------HHHHhhhcchhhhccCCeE--EEecccccHHHHHHHHhc
Confidence 34677778999999999999999987752 2444577777777778877 888888777777775 3
Q ss_pred CCCEecccc
Q 039701 370 GLPMVTWPF 378 (476)
Q Consensus 370 GvP~l~~P~ 378 (476)
|+..+.=|.
T Consensus 128 g~~t~hGp~ 136 (327)
T 4h1h_A 128 ELITYSGAH 136 (327)
T ss_dssp CBCEEECCC
T ss_pred CeEEEeCcc
Confidence 555554444
No 122
>2bln_A Protein YFBG; transferase, formyltransferase, L-ARA4N biosynthesis, methyltransferase; HET: FON U5P; 1.2A {Escherichia coli} SCOP: b.46.1.1 c.65.1.1 PDB: 1yrw_A
Probab=41.75 E-value=1.2e+02 Score=27.56 Aligned_cols=39 Identities=10% Similarity=-0.085 Sum_probs=26.4
Q ss_pred HHHHHHhcCCCCeEEEecCCC-chhHHHHhHcCCCcEEEecc
Q 039701 109 LETLFKEIQPKPGCLISDVCL-PWTVSSACKFNVPRIVFHGF 149 (476)
Q Consensus 109 l~~~l~~~~~~~D~vI~D~~~-~~~~~~A~~~giP~v~~~~~ 149 (476)
+.+.+++ .+||++|+-.+. .-...+-......++-++++
T Consensus 67 ~~~~l~~--~~~Dliv~~~y~~ilp~~il~~~~~g~iNiHpS 106 (305)
T 2bln_A 67 WVERIAQ--LSPDVIFSFYYRHLIYDEILQLAPAGAFNLHGS 106 (305)
T ss_dssp HHHHHHH--TCCSEEEEESCCSCCCHHHHTTCTTCEEEEESS
T ss_pred HHHHHHh--cCCCEEEEeccccccCHHHHhcCcCCEEEecCC
Confidence 4556677 799999976653 44556666666677776665
No 123
>3lp6_A Phosphoribosylaminoimidazole carboxylase catalyti; alpha and beta protein, structural genomics, PSI-2, protein initiative; 1.70A {Mycobacterium tuberculosis} SCOP: c.23.8.0
Probab=41.61 E-value=1.5e+02 Score=24.42 Aligned_cols=139 Identities=14% Similarity=0.089 Sum_probs=73.8
Q ss_pred eEEEecCCcccCCHHHHHHHHHHHHhCCCCeEEEEcCCCCCchhHHHHhcCCCeEeeccccHHHhhhCCCceeeecccCh
Q 039701 281 AVYVCLGSLCDCSTRQLIELGLGLEATKKPFIWVIRPGDQAFEKFEERIEGRGLLIRGWAPQVVILSHPAIGGFLTHCGW 360 (476)
Q Consensus 281 vv~vs~GS~~~~~~~~~~~i~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~nv~~~~~vpq~~ll~~~~~~~~I~HgG~ 360 (476)
.|-|-+||.+ +....++....++..+.++=..+.+-...++.+.+. +-... -...++ +|.=+|.
T Consensus 9 ~V~IimgS~S--D~~v~~~a~~~L~~~gi~~ev~V~SaHR~p~~~~~~-----------~~~a~-~~g~~V--iIa~AG~ 72 (174)
T 3lp6_A 9 RVGVIMGSDS--DWPVMADAAAALAEFDIPAEVRVVSAHRTPEAMFSY-----------ARGAA-ARGLEV--IIAGAGG 72 (174)
T ss_dssp SEEEEESCGG--GHHHHHHHHHHHHHTTCCEEEEECCTTTCHHHHHHH-----------HHHHH-HHTCCE--EEEEEES
T ss_pred eEEEEECcHH--hHHHHHHHHHHHHHcCCCEEEEEECCCCCHHHHHHH-----------HHHHH-hCCCCE--EEEecCc
Confidence 4666678765 456677788888888887766665544334444321 11000 022334 7766664
Q ss_pred ----hhHHHHHHcCCCEecccccccch-hhHHHH--HH-hhcceEEe-ccCCCCCCcccccCCcccchhHHHHHHHHHhc
Q 039701 361 ----NSVLEAVSNGLPMVTWPFFADQF-CNEKLV--VQ-VLRIGVTI-GAERPPSLADEERNGVPVKKEDVKKAINMLMD 431 (476)
Q Consensus 361 ----~s~~eal~~GvP~l~~P~~~DQ~-~~a~~v--~e-~~g~G~~l-~~~~~~~~~~~~~~~~~~t~~~l~~~i~~ll~ 431 (476)
.++..+ ..-+|+|.+|...... .....+ .+ =-|+.+.. ... +..++..++..|-.+ .
T Consensus 73 aa~LpgvvA~-~t~~PVIgVP~~~~~l~G~daLlS~vqmp~GvpVatV~I~------------~~~nAa~lAa~Il~~-~ 138 (174)
T 3lp6_A 73 AAHLPGMVAA-ATPLPVIGVPVPLGRLDGLDSLLSIVQMPAGVPVATVSIG------------GAGNAGLLAVRMLGA-A 138 (174)
T ss_dssp SCCHHHHHHH-HCSSCEEEEEECCSSGGGHHHHHHHHCCCTTCCCEECCTT------------CHHHHHHHHHHHHHT-T
T ss_pred hhhhHHHHHh-ccCCCEEEeeCCCCCCCCHHHHHHHhhCCCCCeeEEEEcC------------cchHHHHHHHHHHhC-C
Confidence 233333 3678999999863321 122122 11 11322221 111 245666666666554 4
Q ss_pred CChhhHHHHHHHHHHHHHHHHH
Q 039701 432 EGEERDERRRRAREYGETAKTA 453 (476)
Q Consensus 432 ~~~~~~~~r~~a~~l~~~~~~~ 453 (476)
|+ +++++.+.++++.++.
T Consensus 139 d~----~l~~kl~~~r~~~~~~ 156 (174)
T 3lp6_A 139 NP----QLRARIVAFQDRLADV 156 (174)
T ss_dssp CH----HHHHHHHHHHHHHHHH
T ss_pred CH----HHHHHHHHHHHHHHHH
Confidence 45 7777777777776654
No 124
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=41.57 E-value=25 Score=29.80 Aligned_cols=30 Identities=3% Similarity=0.091 Sum_probs=24.5
Q ss_pred CCCceeeecccChhhHHHHHHcCCCEecccccc
Q 039701 348 HPAIGGFLTHCGWNSVLEAVSNGLPMVTWPFFA 380 (476)
Q Consensus 348 ~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~ 380 (476)
.+++ +|+.||........ .++|+|-++...
T Consensus 51 ~~dV--IISRGgta~~lr~~-~~iPVV~I~~s~ 80 (196)
T 2q5c_A 51 EVDA--IISRGATSDYIKKS-VSIPSISIKVTR 80 (196)
T ss_dssp TCSE--EEEEHHHHHHHHTT-CSSCEEEECCCH
T ss_pred CCeE--EEECChHHHHHHHh-CCCCEEEEcCCH
Confidence 4555 99999998888875 689999999954
No 125
>3l4e_A Uncharacterized peptidase LMO0363; hypothetical protein LMO0363, csgid, similar to peptidase E, hydrolase, protease, serine protease; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=41.11 E-value=50 Score=28.13 Aligned_cols=46 Identities=11% Similarity=-0.052 Sum_probs=32.1
Q ss_pred ccccccCCCCCceEEEecCCcccCCHHHHHHHHHHHHhCCCCeEEE
Q 039701 269 CLKWLDSWQPGSAVYVCLGSLCDCSTRQLIELGLGLEATKKPFIWV 314 (476)
Q Consensus 269 l~~~l~~~~~~~vv~vs~GS~~~~~~~~~~~i~~a~~~~~~~~i~~ 314 (476)
+.+|+.....+.++||..+|......+.+....+++++.+..+.+.
T Consensus 18 ~~~f~~~~~~~~i~~Ip~As~~~~~~~~~~s~~~a~~~lG~~v~~~ 63 (206)
T 3l4e_A 18 FTEFESNLQGKTVTFIPTASTVEEVTFYVEAGKKALESLGLLVEEL 63 (206)
T ss_dssp HHHHSCCCTTCEEEEECGGGGGCSCCHHHHHHHHHHHHTTCEEEEC
T ss_pred HHHHHHHcCCCEEEEECCCCCCCCHHHHHHHHHHHHHHcCCeEEEE
Confidence 4456544444669999988765444466777899999999876554
No 126
>1kjq_A GART 2, phosphoribosylglycinamide formyltransferase 2, 5'-; ATP-grAsp, purine biosynthesis, nucleotide; HET: ADP MPO; 1.05A {Escherichia coli} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1kj9_A* 1kji_A* 1kjj_A* 1kj8_A* 1eyz_A* 1ez1_A*
Probab=41.02 E-value=86 Score=29.39 Aligned_cols=34 Identities=15% Similarity=-0.051 Sum_probs=25.6
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHHCCCeEEEEeCCc
Q 039701 8 QLHFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTTPM 46 (476)
Q Consensus 8 ~~~vl~~~~p~~GHv~P~l~La~~L~~rGH~Vt~~~~~~ 46 (476)
+++|+++..+ .--..+++++.+.|++|..+....
T Consensus 11 ~~~ili~g~g-----~~~~~~~~a~~~~G~~v~~~~~~~ 44 (391)
T 1kjq_A 11 ATRVMLLGSG-----ELGKEVAIECQRLGVEVIAVDRYA 44 (391)
T ss_dssp CCEEEEESCS-----HHHHHHHHHHHTTTCEEEEEESST
T ss_pred CCEEEEECCC-----HHHHHHHHHHHHcCCEEEEEECCC
Confidence 4689998543 234778999999999998887643
No 127
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=40.99 E-value=1.2e+02 Score=23.43 Aligned_cols=107 Identities=11% Similarity=0.078 Sum_probs=62.0
Q ss_pred CCHHHHHHHHHHHHhCCCCeEEEEcCCCCCchhHHHHhcCCCeEeecc-ccHHHhhhCCCceeeecccChhhHHHHHH--
Q 039701 292 CSTRQLIELGLGLEATKKPFIWVIRPGDQAFEKFEERIEGRGLLIRGW-APQVVILSHPAIGGFLTHCGWNSVLEAVS-- 368 (476)
Q Consensus 292 ~~~~~~~~i~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~nv~~~~~-vpq~~ll~~~~~~~~I~HgG~~s~~eal~-- 368 (476)
.++.....+...++..++.++....++....+.+.+ .+..+++.+| .|..+ | -.+++.+.
T Consensus 20 D~~~~r~~l~~~L~~~G~~~v~~a~~g~~al~~~~~--~~~DlillD~~MP~md--------------G-~el~~~ir~~ 82 (134)
T 3to5_A 20 DFSTMRRIVKNLLRDLGFNNTQEADDGLTALPMLKK--GDFDFVVTDWNMPGMQ--------------G-IDLLKNIRAD 82 (134)
T ss_dssp SCHHHHHHHHHHHHHTTCCCEEEESSHHHHHHHHHH--HCCSEEEEESCCSSSC--------------H-HHHHHHHHHS
T ss_pred CCHHHHHHHHHHHHHcCCcEEEEECCHHHHHHHHHh--CCCCEEEEcCCCCCCC--------------H-HHHHHHHHhC
Confidence 344555556777888898766555443210111111 2455666554 22111 1 13344443
Q ss_pred ---cCCCEecccccccchhhHHHHHHhhcceEEeccCCCCCCcccccCCcccchhHHHHHHHHHhc
Q 039701 369 ---NGLPMVTWPFFADQFCNEKLVVQVLRIGVTIGAERPPSLADEERNGVPVKKEDVKKAINMLMD 431 (476)
Q Consensus 369 ---~GvP~l~~P~~~DQ~~~a~~v~e~~g~G~~l~~~~~~~~~~~~~~~~~~t~~~l~~~i~~ll~ 431 (476)
..+|+|++--..+.. ...+. -+.|+--.+.+- ++.++|.++|+++++
T Consensus 83 ~~~~~ipvI~lTa~~~~~-~~~~~-~~~Ga~~yl~KP--------------~~~~~L~~~i~~~l~ 132 (134)
T 3to5_A 83 EELKHLPVLMITAEAKRE-QIIEA-AQAGVNGYIVKP--------------FTAATLKEKLDKIFE 132 (134)
T ss_dssp TTTTTCCEEEEESSCCHH-HHHHH-HHTTCCEEEESS--------------CCHHHHHHHHHHHCC
T ss_pred CCCCCCeEEEEECCCCHH-HHHHH-HHCCCCEEEECC--------------CCHHHHHHHHHHHHh
Confidence 468888876655544 44445 377887777553 999999999999884
No 128
>3s40_A Diacylglycerol kinase; structural genomics, the center for structural genomics of infectious diseases, csgid, transfer; 2.10A {Bacillus anthracis} PDB: 3t5p_A
Probab=40.10 E-value=58 Score=29.61 Aligned_cols=67 Identities=13% Similarity=0.085 Sum_probs=42.1
Q ss_pred HHHHHHHHHHHHhCCCCeEEEEcCCCCCchhHHHHhcCCCeEeeccccHHHhhhCCCceeeecccChhhHHHHHH-----
Q 039701 294 TRQLIELGLGLEATKKPFIWVIRPGDQAFEKFEERIEGRGLLIRGWAPQVVILSHPAIGGFLTHCGWNSVLEAVS----- 368 (476)
Q Consensus 294 ~~~~~~i~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~nv~~~~~vpq~~ll~~~~~~~~I~HgG~~s~~eal~----- 368 (476)
.+.+..+...++..+..+.+...........+.. ++....++ +|.-||-||+.|++.
T Consensus 25 ~~~~~~i~~~l~~~~~~~~~~~t~~~~~a~~~~~----------------~~~~~~d~--vv~~GGDGTl~~v~~~l~~~ 86 (304)
T 3s40_A 25 HTNLTKIVPPLAAAFPDLHILHTKEQGDATKYCQ----------------EFASKVDL--IIVFGGDGTVFECTNGLAPL 86 (304)
T ss_dssp HHHHHHHHHHHHHHCSEEEEEECCSTTHHHHHHH----------------HHTTTCSE--EEEEECHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHcCCeEEEEEccCcchHHHHHH----------------HhhcCCCE--EEEEccchHHHHHHHHHhhC
Confidence 3455667777877777766655433210111111 11123455 999999999999864
Q ss_pred -cCCCEecccc
Q 039701 369 -NGLPMVTWPF 378 (476)
Q Consensus 369 -~GvP~l~~P~ 378 (476)
.++|+.++|.
T Consensus 87 ~~~~~l~iiP~ 97 (304)
T 3s40_A 87 EIRPTLAIIPG 97 (304)
T ss_dssp SSCCEEEEEEC
T ss_pred CCCCcEEEecC
Confidence 5799999998
No 129
>3sz8_A 2-dehydro-3-deoxyphosphooctonate aldolase 2; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.05A {Burkholderia pseudomallei} PDB: 3tmq_A* 3und_A*
Probab=40.02 E-value=2.1e+02 Score=25.71 Aligned_cols=113 Identities=12% Similarity=0.095 Sum_probs=59.5
Q ss_pred HHHHHHhCCCCeEEEEcCCCCCchhHHHHhcCCCeEeeccccHHHhhh--CCCceeeecccChh----h---------HH
Q 039701 300 LGLGLEATKKPFIWVIRPGDQAFEKFEERIEGRGLLIRGWAPQVVILS--HPAIGGFLTHCGWN----S---------VL 364 (476)
Q Consensus 300 i~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~nv~~~~~vpq~~ll~--~~~~~~~I~HgG~~----s---------~~ 364 (476)
+++++.+.+.+++++.+-... ++.+..-+ ..+.. ..++ +++|+|.. . ++
T Consensus 126 LLr~va~~gkPVilK~G~~~t-~~ei~~av-------------e~i~~~Gn~~i--~L~erg~~y~~~~~~vdl~~i~~l 189 (285)
T 3sz8_A 126 LVVAIAKAGKPVNVKKPQFMS-PTQLKHVV-------------SKCGEVGNDRV--MLCERGSSFGYDNLVVDMLGFRQM 189 (285)
T ss_dssp HHHHHHHTSSCEEEECCTTSC-GGGTHHHH-------------HHHHHTTCCCE--EEEECCEECSSSCEECCTTHHHHH
T ss_pred HHHHHHccCCcEEEeCCCCCC-HHHHHHHH-------------HHHHHcCCCcE--EEEeCCCCCCCCcCccCHHHHHHH
Confidence 667777888998888765421 22222110 01111 2334 77777751 1 23
Q ss_pred HHHHcCCCEecccccccc----------------hhhHHHHHHhhcc-eEEeccCCCCCCcccccCCcccchhHHHHHHH
Q 039701 365 EAVSNGLPMVTWPFFADQ----------------FCNEKLVVQVLRI-GVTIGAERPPSLADEERNGVPVKKEDVKKAIN 427 (476)
Q Consensus 365 eal~~GvP~l~~P~~~DQ----------------~~~a~~v~e~~g~-G~~l~~~~~~~~~~~~~~~~~~t~~~l~~~i~ 427 (476)
...++|+|++.-|.+.=| +..+...+ -+|+ |+.+.....++-+.. +..-.++++++.+.++
T Consensus 190 k~~~~~~pV~~D~sHs~q~p~~~~~~s~G~r~~v~~~a~AAv-A~GA~gl~IE~H~~pd~al~-D~~~sl~p~el~~lv~ 267 (285)
T 3sz8_A 190 AETTGGCPVIFDVTHSLQCRDPLGDASGGRRRQVLDLARAGI-AVGIAGLFLEAHPDPDRARC-DGPSALPLHQLEGLLS 267 (285)
T ss_dssp HHHTTSCCEEEETTTTCC---------------HHHHHHHHH-HHCCSEEEEEEESCGGGCSC-SSCCCEEGGGHHHHHH
T ss_pred HHhCCCCCEEEeCCCccccCCCcCCCCCCchhhHHHHHHHHH-HhCCCEEEEEeccChhccCC-chhhccCHHHHHHHHH
Confidence 334558999887777621 34455554 6777 445533211111111 2224577788887776
Q ss_pred HHh
Q 039701 428 MLM 430 (476)
Q Consensus 428 ~ll 430 (476)
++.
T Consensus 268 ~i~ 270 (285)
T 3sz8_A 268 QMK 270 (285)
T ss_dssp HHH
T ss_pred HHH
Confidence 664
No 130
>1pno_A NAD(P) transhydrogenase subunit beta; nucleotide binding fold, oxidoreductase; HET: NAP; 2.10A {Rhodospirillum rubrum} SCOP: c.31.1.4 PDB: 1pnq_A* 1xlt_C* 2oor_C* 1ptj_C* 2oo5_C*
Probab=39.99 E-value=30 Score=28.23 Aligned_cols=34 Identities=24% Similarity=0.460 Sum_probs=27.6
Q ss_pred EEEEEcCCCcc-----ChHHHHHHHHHHHHCCCeEEEEeCC
Q 039701 10 HFILFPFLAQG-----HMIPMIDIARLLAQHGALVTIVTTP 45 (476)
Q Consensus 10 ~vl~~~~p~~G-----Hv~P~l~La~~L~~rGH~Vt~~~~~ 45 (476)
+|+|+| ++| --++...|++.|.++|.+|.|..+|
T Consensus 25 ~ViIvP--GYGmAvAqAQ~~v~el~~~L~~~G~~V~faIHP 63 (180)
T 1pno_A 25 KVIIVP--GYGMAVAQAQHALREMADVLKKEGVEVSYAIHP 63 (180)
T ss_dssp EEEEEE--CHHHHHHTCHHHHHHHHHHHHHTTCEEEEEECT
T ss_pred eEEEEC--ChHHHHHHHHHHHHHHHHHHHHCCCeEEEEecc
Confidence 677765 333 2358889999999999999999998
No 131
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=39.56 E-value=32 Score=29.92 Aligned_cols=29 Identities=7% Similarity=0.009 Sum_probs=24.1
Q ss_pred CCceeeecccChhhHHHHHHcCCCEecccccc
Q 039701 349 PAIGGFLTHCGWNSVLEAVSNGLPMVTWPFFA 380 (476)
Q Consensus 349 ~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~ 380 (476)
+++ +|+.||........ .++|+|-++...
T Consensus 64 ~dV--IISRGgta~~Lr~~-~~iPVV~I~vs~ 92 (225)
T 2pju_A 64 CDA--IIAAGSNGAYLKSR-LSVPVILIKPSG 92 (225)
T ss_dssp CSE--EEEEHHHHHHHHTT-CSSCEEEECCCH
T ss_pred CeE--EEeCChHHHHHHhh-CCCCEEEecCCH
Confidence 566 99999998888875 689999999843
No 132
>1d4o_A NADP(H) transhydrogenase; nucleotide-binding fold, protein-NADP(H) complex, inverted binding of NADP(H), oxidoreductase; HET: NAP; 1.21A {Bos taurus} SCOP: c.31.1.4
Probab=39.49 E-value=31 Score=28.27 Aligned_cols=34 Identities=26% Similarity=0.569 Sum_probs=27.4
Q ss_pred EEEEEcCCCcc-----ChHHHHHHHHHHHHCCCeEEEEeCC
Q 039701 10 HFILFPFLAQG-----HMIPMIDIARLLAQHGALVTIVTTP 45 (476)
Q Consensus 10 ~vl~~~~p~~G-----Hv~P~l~La~~L~~rGH~Vt~~~~~ 45 (476)
+|+|+| ++| --++...|++.|.++|.+|.|..+|
T Consensus 24 ~ViIvP--GYGmAvAqAQ~~v~el~~~L~~~G~~V~faIHP 62 (184)
T 1d4o_A 24 SIIITP--GYGLCAAKAQYPIADLVKMLSEQGKKVRFGIHP 62 (184)
T ss_dssp EEEEEE--CHHHHHTTTHHHHHHHHHHHHHTTCEEEEEECT
T ss_pred eEEEEC--ChHHHHHHHHHHHHHHHHHHHHCCCeEEEEecc
Confidence 677765 333 2358899999999999999999998
No 133
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=39.38 E-value=21 Score=33.12 Aligned_cols=33 Identities=18% Similarity=0.307 Sum_probs=28.5
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHHCCCeEEEEeCC
Q 039701 8 QLHFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTTP 45 (476)
Q Consensus 8 ~~~vl~~~~p~~GHv~P~l~La~~L~~rGH~Vt~~~~~ 45 (476)
++||.|+-.+.+| ..+|..|++.||+|++....
T Consensus 14 ~~kI~iIG~G~mG-----~ala~~L~~~G~~V~~~~r~ 46 (335)
T 1z82_A 14 EMRFFVLGAGSWG-----TVFAQMLHENGEEVILWARR 46 (335)
T ss_dssp CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSS
T ss_pred CCcEEEECcCHHH-----HHHHHHHHhCCCeEEEEeCC
Confidence 6899999998888 47899999999999998753
No 134
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=39.09 E-value=17 Score=33.11 Aligned_cols=32 Identities=16% Similarity=0.056 Sum_probs=27.3
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHHCCCeEEEEeC
Q 039701 8 QLHFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTT 44 (476)
Q Consensus 8 ~~~vl~~~~p~~GHv~P~l~La~~L~~rGH~Vt~~~~ 44 (476)
+++|.|+-.+..|. .+|+.|+++||+|++...
T Consensus 7 ~~~I~iIG~G~mG~-----~~a~~l~~~G~~V~~~dr 38 (303)
T 3g0o_A 7 DFHVGIVGLGSMGM-----GAARSCLRAGLSTWGADL 38 (303)
T ss_dssp CCEEEEECCSHHHH-----HHHHHHHHTTCEEEEECS
T ss_pred CCeEEEECCCHHHH-----HHHHHHHHCCCeEEEEEC
Confidence 67999998888774 689999999999998854
No 135
>1ybh_A Acetolactate synthase, chloroplast; acetohydroxyacid synthase, herbicide, sulfonylurea, thiamin diphosphate, FAD, inhibitor; HET: CIE NHE FAD P22; 2.50A {Arabidopsis thaliana} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1yhy_A* 1yhz_A* 1yi0_A* 1yi1_A* 1z8n_A* 3ea4_A* 3e9y_A*
Probab=38.76 E-value=1e+02 Score=30.92 Aligned_cols=29 Identities=21% Similarity=0.401 Sum_probs=23.6
Q ss_pred CCCceeeecccChh------hHHHHHHcCCCEecccc
Q 039701 348 HPAIGGFLTHCGWN------SVLEAVSNGLPMVTWPF 378 (476)
Q Consensus 348 ~~~~~~~I~HgG~~------s~~eal~~GvP~l~~P~ 378 (476)
++.+ +++|.|-| +++||-+.++|+|++--
T Consensus 75 ~p~v--~~~TsGpG~~N~~~gv~~A~~~~vPll~itg 109 (590)
T 1ybh_A 75 KPGI--CIATSGPGATNLVSGLADALLDSVPLVAITG 109 (590)
T ss_dssp SCEE--EEECTTHHHHTTHHHHHHHHHHTCCEEEEEE
T ss_pred CCEE--EEeccCchHHHHHHHHHHHHhhCCCEEEEeC
Confidence 4555 99999964 78899999999999843
No 136
>1zl0_A Hypothetical protein PA5198; structural genomics, PSI, PROT structure initiative, midwest center for structural genomic unknown function; HET: TLA PEG; 1.10A {Pseudomonas aeruginosa} SCOP: c.8.10.1 c.23.16.7 PDB: 1zrs_A 2aum_A 2aun_A
Probab=38.75 E-value=63 Score=29.56 Aligned_cols=74 Identities=16% Similarity=0.220 Sum_probs=58.1
Q ss_pred CCHHHHHHHHHHHHhCCCCeEEEEcCCCCCchhHHHHhcCCCeEeeccccHHHhhh-CCCceeeecccChhhHHHHHH-c
Q 039701 292 CSTRQLIELGLGLEATKKPFIWVIRPGDQAFEKFEERIEGRGLLIRGWAPQVVILS-HPAIGGFLTHCGWNSVLEAVS-N 369 (476)
Q Consensus 292 ~~~~~~~~i~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~nv~~~~~vpq~~ll~-~~~~~~~I~HgG~~s~~eal~-~ 369 (476)
.+.+....|.+++.....+.||...++.. -..+.++++...+-. +|.. ||=+.-...++-+++ .
T Consensus 64 td~~Ra~dL~~a~~Dp~i~aI~~~rGGyg------------a~rlLp~LD~~~i~~a~PK~--~iGySDiTaL~~al~~~ 129 (311)
T 1zl0_A 64 TVEQRLEDLHNAFDMPDITAVWCLRGGYG------------CGQLLPGLDWGRLQAASPRP--LIGFSDISVLLSAFHRH 129 (311)
T ss_dssp CHHHHHHHHHHHHHSTTEEEEEESCCSSC------------GGGGTTTCCHHHHHHSCCCC--EEECGGGHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHhCCCCCEEEEccCCcC------------HHHHhhccchhhhhccCCCE--EEEEchhHHHHHHHHHc
Confidence 45677778999999999999999988752 234456777777776 8888 999999999998887 4
Q ss_pred CCCEeccccc
Q 039701 370 GLPMVTWPFF 379 (476)
Q Consensus 370 GvP~l~~P~~ 379 (476)
|++.+.=|..
T Consensus 130 G~~t~hGp~~ 139 (311)
T 1zl0_A 130 GLPAIHGPVA 139 (311)
T ss_dssp TCCEEECCCG
T ss_pred CCcEEECHhh
Confidence 8887777754
No 137
>1t9b_A Acetolactate synthase, mitochondrial; acetohydroxyacid synthase, herbicide, sulfonylurea, thiamin diphosphate, FAD, inhibitor; HET: 1CS P25 FAD NSP P22 YF3; 2.20A {Saccharomyces cerevisiae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1n0h_A* 1t9a_A* 1t9c_A* 1t9d_A* 1jsc_A*
Probab=38.70 E-value=91 Score=32.10 Aligned_cols=78 Identities=13% Similarity=0.100 Sum_probs=47.9
Q ss_pred HHHHHHHHHhCCCCeEEEEcCCCCCchhHHHHh-cCCCeEeeccc--------c--HHHhhhCCCceeeecccCh-----
Q 039701 297 LIELGLGLEATKKPFIWVIRPGDQAFEKFEERI-EGRGLLIRGWA--------P--QVVILSHPAIGGFLTHCGW----- 360 (476)
Q Consensus 297 ~~~i~~a~~~~~~~~i~~~~~~~~~~~~~~~~~-~~~nv~~~~~v--------p--q~~ll~~~~~~~~I~HgG~----- 360 (476)
-+.|++.|++.+++.|+.+.++.. ..+-+.+ ..+++....-. - +..+-.++.+ +++|.|-
T Consensus 85 a~~lv~~L~~~GV~~vFg~PG~~~--~pl~dal~~~~~i~~v~~~hE~~Aa~aAdGyAr~tGkpgv--v~~TsGpG~~N~ 160 (677)
T 1t9b_A 85 GQIFNEMMSRQNVDTVFGYPGGAI--LPVYDAIHNSDKFNFVLPKHEQGAGHMAEGYARASGKPGV--VLVTSGPGATNV 160 (677)
T ss_dssp HHHHHHHHHHTTCCEEEECCCGGG--HHHHHHTTTCSSSEEECCSSHHHHHHHHHHHHHHHSSCEE--EEECSTHHHHTT
T ss_pred HHHHHHHHHHcCCCEEEEecCccH--HHHHHHHHhCCCCeEEEeCChHHHHHHHHHHHHHHCCCEE--EEECCChHHHHH
Confidence 455788888888888887766541 1222222 12334433221 1 1122234445 9999996
Q ss_pred -hhHHHHHHcCCCEecccc
Q 039701 361 -NSVLEAVSNGLPMVTWPF 378 (476)
Q Consensus 361 -~s~~eal~~GvP~l~~P~ 378 (476)
+.++||-+.++|+|++--
T Consensus 161 ~~gia~A~~d~vPllvItG 179 (677)
T 1t9b_A 161 VTPMADAFADGIPMVVFTG 179 (677)
T ss_dssp HHHHHHHHHHTCCEEEEEE
T ss_pred HHHHHHHHHcCCCEEEEeC
Confidence 588899999999999853
No 138
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=38.02 E-value=18 Score=33.02 Aligned_cols=38 Identities=18% Similarity=0.269 Sum_probs=29.5
Q ss_pred CCCCCCCCcEEEEEcCCCccChHHHHHHHHHHHHCCCeEEEEeC
Q 039701 1 MASQAGSQLHFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTT 44 (476)
Q Consensus 1 m~~~~~~~~~vl~~~~p~~GHv~P~l~La~~L~~rGH~Vt~~~~ 44 (476)
|..+.+ .++|.|+-.+.+|. .+|+.|+++||+|++...
T Consensus 3 m~~~~~-~~~IgiIG~G~mG~-----~~A~~l~~~G~~V~~~dr 40 (306)
T 3l6d_A 3 LSDESF-EFDVSVIGLGAMGT-----IMAQVLLKQGKRVAIWNR 40 (306)
T ss_dssp CCCCCC-SCSEEEECCSHHHH-----HHHHHHHHTTCCEEEECS
T ss_pred CCcccC-CCeEEEECCCHHHH-----HHHHHHHHCCCEEEEEeC
Confidence 444444 57899998887775 689999999999998753
No 139
>1o4v_A Phosphoribosylaminoimidazole mutase PURE; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 1.77A {Thermotoga maritima} SCOP: c.23.8.1
Probab=37.93 E-value=1.7e+02 Score=24.20 Aligned_cols=140 Identities=14% Similarity=0.154 Sum_probs=72.5
Q ss_pred ceEEEecCCcccCCHHHHHHHHHHHHhCCCCeEEEEcCCCCCchhHHHHhcCCCeEeeccccHHHhhhCCCceeeecccC
Q 039701 280 SAVYVCLGSLCDCSTRQLIELGLGLEATKKPFIWVIRPGDQAFEKFEERIEGRGLLIRGWAPQVVILSHPAIGGFLTHCG 359 (476)
Q Consensus 280 ~vv~vs~GS~~~~~~~~~~~i~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~nv~~~~~vpq~~ll~~~~~~~~I~HgG 359 (476)
|.|-|-+||.+ +....++....++..+.++=..+.+-...++.+.+..+ +.. =...++ +|.=+|
T Consensus 14 ~~V~IimGS~S--D~~v~~~a~~~L~~~Gi~~dv~V~SaHR~p~~l~~~~~-----------~a~-~~g~~V--iIa~AG 77 (183)
T 1o4v_A 14 PRVGIIMGSDS--DLPVMKQAAEILEEFGIDYEITIVSAHRTPDRMFEYAK-----------NAE-ERGIEV--IIAGAG 77 (183)
T ss_dssp CEEEEEESCGG--GHHHHHHHHHHHHHTTCEEEEEECCTTTCHHHHHHHHH-----------HTT-TTTCCE--EEEEEE
T ss_pred CeEEEEeccHH--HHHHHHHHHHHHHHcCCCeEEEEEcccCCHHHHHHHHH-----------HHH-hCCCcE--EEEecC
Confidence 46778888876 45667777888888888776666554433444433110 000 011223 665555
Q ss_pred h----hhHHHHHHcCCCEecccccccc-hhhHH--HHHHhh--cceEE-eccCCCCCCcccccCCcccchhHHHHHHHHH
Q 039701 360 W----NSVLEAVSNGLPMVTWPFFADQ-FCNEK--LVVQVL--RIGVT-IGAERPPSLADEERNGVPVKKEDVKKAINML 429 (476)
Q Consensus 360 ~----~s~~eal~~GvP~l~~P~~~DQ-~~~a~--~v~e~~--g~G~~-l~~~~~~~~~~~~~~~~~~t~~~l~~~i~~l 429 (476)
. .++..++ .-+|+|.+|..... ..... -+. +. |+.+. +... +..++.-++..|-.+
T Consensus 78 ~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~dsLlSiv-qmP~GvpVatV~Id------------~~~nAa~lAaqIla~ 143 (183)
T 1o4v_A 78 GAAHLPGMVASI-THLPVIGVPVKTSTLNGLDSLFSIV-QMPGGVPVATVAIN------------NAKNAGILAASILGI 143 (183)
T ss_dssp SSCCHHHHHHHH-CSSCEEEEEECCTTTTTHHHHHHHH-TCCTTCCCEECCTT------------CHHHHHHHHHHHHHT
T ss_pred cccccHHHHHhc-cCCCEEEeeCCCCCCCcHHHHHHHh-cCCCCCeeEEEecC------------CchHHHHHHHHHHhc
Confidence 3 2333333 67888888885421 11122 122 33 42221 1111 245666666655533
Q ss_pred hcCChhhHHHHHHHHHHHHHHHHHH
Q 039701 430 MDEGEERDERRRRAREYGETAKTAI 454 (476)
Q Consensus 430 l~~~~~~~~~r~~a~~l~~~~~~~~ 454 (476)
.|+ +++++.+..+...++.+
T Consensus 144 -~d~----~l~~kL~~~r~~~~~~v 163 (183)
T 1o4v_A 144 -KYP----EIARKVKEYKERMKREV 163 (183)
T ss_dssp -TCH----HHHHHHHHHHHHHHHHH
T ss_pred -CCH----HHHHHHHHHHHHHHHHH
Confidence 455 66666666666655544
No 140
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=37.84 E-value=23 Score=31.93 Aligned_cols=33 Identities=21% Similarity=0.319 Sum_probs=23.9
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHHCCCeEEEEeCC
Q 039701 9 LHFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTTP 45 (476)
Q Consensus 9 ~~vl~~~~p~~GHv~P~l~La~~L~~rGH~Vt~~~~~ 45 (476)
|||++. |+.|-+= ..|++.|.++||+|+.++-.
T Consensus 1 MkILVT--GatGfIG--~~L~~~L~~~G~~V~~l~R~ 33 (298)
T 4b4o_A 1 MRVLVG--GGTGFIG--TALTQLLNARGHEVTLVSRK 33 (298)
T ss_dssp CEEEEE--TTTSHHH--HHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEE--CCCCHHH--HHHHHHHHHCCCEEEEEECC
Confidence 466654 5556554 35889999999999998753
No 141
>3rg8_A Phosphoribosylaminoimidazole carboxylase, PURE PR; purine biosynthesis, lyase; 1.74A {Treponema denticola} SCOP: c.23.8.0 PDB: 3rgg_A*
Probab=37.77 E-value=1.6e+02 Score=23.80 Aligned_cols=137 Identities=12% Similarity=0.053 Sum_probs=70.4
Q ss_pred eEEEecCCcccCCHHHHHHHHHHHHhCCCCeEEEEcCCCCCchhHHHHhcCCCeEeeccccHHHhhhCCCceeeecccCh
Q 039701 281 AVYVCLGSLCDCSTRQLIELGLGLEATKKPFIWVIRPGDQAFEKFEERIEGRGLLIRGWAPQVVILSHPAIGGFLTHCGW 360 (476)
Q Consensus 281 vv~vs~GS~~~~~~~~~~~i~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~nv~~~~~vpq~~ll~~~~~~~~I~HgG~ 360 (476)
.|-|-+||.+ +....++....++..+.++-..+.+-...++.+.+.. .... ..-..+++|.=+|.
T Consensus 4 ~V~Iimgs~S--D~~v~~~a~~~l~~~gi~~ev~V~saHR~p~~~~~~~-----------~~a~--~~~~~~ViIa~AG~ 68 (159)
T 3rg8_A 4 LVIILMGSSS--DMGHAEKIASELKTFGIEYAIRIGSAHKTAEHVVSML-----------KEYE--ALDRPKLYITIAGR 68 (159)
T ss_dssp EEEEEESSGG--GHHHHHHHHHHHHHTTCEEEEEECCTTTCHHHHHHHH-----------HHHH--TSCSCEEEEEECCS
T ss_pred eEEEEECcHH--HHHHHHHHHHHHHHcCCCEEEEEEcccCCHHHHHHHH-----------HHhh--hcCCCcEEEEECCc
Confidence 4666677765 4566677778888888776665555443344443211 1000 00012237766664
Q ss_pred ----hhHHHHHHcCCCEecccccc---cchhhHHHHHHhh--cceEEeccCCCCCCcccccCCcccchhHHHHHHHHHhc
Q 039701 361 ----NSVLEAVSNGLPMVTWPFFA---DQFCNEKLVVQVL--RIGVTIGAERPPSLADEERNGVPVKKEDVKKAINMLMD 431 (476)
Q Consensus 361 ----~s~~eal~~GvP~l~~P~~~---DQ~~~a~~v~e~~--g~G~~l~~~~~~~~~~~~~~~~~~t~~~l~~~i~~ll~ 431 (476)
.++..+ ..-+|+|.+|... +..+ -.-+. +. |+.+.-- . +..++.-++..|-.+ .
T Consensus 69 aa~LpgvvA~-~t~~PVIgVP~~~~~l~G~d-LlS~v-qmp~GvpVatv-~------------~~~nAa~lA~~Il~~-~ 131 (159)
T 3rg8_A 69 SNALSGFVDG-FVKGATIACPPPSDSFAGAD-IYSSL-RMPSGISPALV-L------------EPKNAALLAARIFSL-Y 131 (159)
T ss_dssp SCCHHHHHHH-HSSSCEEECCCCCCGGGGTH-HHHHH-CCCTTCCCEEC-C------------SHHHHHHHHHHHHTT-T
T ss_pred hhhhHHHHHh-ccCCCEEEeeCCCCCCCCcc-HHHHH-hCCCCCceEEe-c------------CchHHHHHHHHHHhC-C
Confidence 233333 3668999999632 2222 12222 22 3332211 1 245666666555444 4
Q ss_pred CChhhHHHHHHHHHHHHHHHHH
Q 039701 432 EGEERDERRRRAREYGETAKTA 453 (476)
Q Consensus 432 ~~~~~~~~r~~a~~l~~~~~~~ 453 (476)
|+ +++++.+..+++.++.
T Consensus 132 d~----~l~~kl~~~r~~~~~~ 149 (159)
T 3rg8_A 132 DK----EIADSVKSYMESNAQK 149 (159)
T ss_dssp CH----HHHHHHHHHHHHHHHH
T ss_pred CH----HHHHHHHHHHHHHHHH
Confidence 45 6777777777666544
No 142
>2i2c_A Probable inorganic polyphosphate/ATP-NAD kinase 1; NADP bound of lmnadk1, transferase; HET: DTA PG4; 1.85A {Listeria monocytogenes egd-e} PDB: 2i1w_A* 2i2a_A* 2i2b_A* 2i29_A* 2i2d_A* 2i2e_A* 3v7u_A* 3v7w_A* 3v7y_A* 3v80_A* 3v8m_A* 3v8n_A* 3v8p_A* 4dy6_A* 2i2f_A* 2q5f_A* 3v8q_A* 3v8r_A*
Probab=37.62 E-value=13 Score=33.43 Aligned_cols=28 Identities=18% Similarity=0.278 Sum_probs=24.1
Q ss_pred CCceeeecccChhhHHHHHHc------CCCEecccc
Q 039701 349 PAIGGFLTHCGWNSVLEAVSN------GLPMVTWPF 378 (476)
Q Consensus 349 ~~~~~~I~HgG~~s~~eal~~------GvP~l~~P~ 378 (476)
+++ +|.-||-||+.+++.. ++|++.+|.
T Consensus 36 ~D~--vv~lGGDGT~l~aa~~~~~~~~~~PilGIn~ 69 (272)
T 2i2c_A 36 PEI--VISIGGDGTFLSAFHQYEERLDEIAFIGIHT 69 (272)
T ss_dssp CSE--EEEEESHHHHHHHHHHTGGGTTTCEEEEEES
T ss_pred CCE--EEEEcCcHHHHHHHHHHhhcCCCCCEEEEeC
Confidence 456 9999999999999765 889998876
No 143
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=37.59 E-value=30 Score=31.80 Aligned_cols=31 Identities=19% Similarity=0.243 Sum_probs=26.4
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHHCCCeEEEEe
Q 039701 8 QLHFILFPFLAQGHMIPMIDIARLLAQHGALVTIVT 43 (476)
Q Consensus 8 ~~~vl~~~~p~~GHv~P~l~La~~L~~rGH~Vt~~~ 43 (476)
++||+++-.|+.| ..+|..|++.||+|+++.
T Consensus 19 ~~kI~IiGaGa~G-----~~~a~~L~~~G~~V~l~~ 49 (318)
T 3hwr_A 19 GMKVAIMGAGAVG-----CYYGGMLARAGHEVILIA 49 (318)
T ss_dssp -CEEEEESCSHHH-----HHHHHHHHHTTCEEEEEC
T ss_pred CCcEEEECcCHHH-----HHHHHHHHHCCCeEEEEE
Confidence 6799999999888 457899999999999993
No 144
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=37.48 E-value=2.4e+02 Score=25.63 Aligned_cols=110 Identities=10% Similarity=0.043 Sum_probs=59.8
Q ss_pred eEEEecCCcccCCHHHHHHHHHHHHhC-CCCeEEEEcCCCCCchhHHHHhcCCCeEeeccccHHHhhhCCCceeeecccC
Q 039701 281 AVYVCLGSLCDCSTRQLIELGLGLEAT-KKPFIWVIRPGDQAFEKFEERIEGRGLLIRGWAPQVVILSHPAIGGFLTHCG 359 (476)
Q Consensus 281 vv~vs~GS~~~~~~~~~~~i~~a~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~nv~~~~~vpq~~ll~~~~~~~~I~HgG 359 (476)
+..|..|.+.. .++.++.+. +..++.+...+....+.+.++. ++. ..+-...+++..+++.+++----
T Consensus 8 igiiG~G~~g~-------~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~---~~~-~~~~~~~~ll~~~~~D~V~i~tp 76 (330)
T 3e9m_A 8 YGIMSTAQIVP-------RFVAGLRESAQAEVRGIASRRLENAQKMAKEL---AIP-VAYGSYEELCKDETIDIIYIPTY 76 (330)
T ss_dssp EEECSCCTTHH-------HHHHHHHHSSSEEEEEEBCSSSHHHHHHHHHT---TCC-CCBSSHHHHHHCTTCSEEEECCC
T ss_pred EEEECchHHHH-------HHHHHHHhCCCcEEEEEEeCCHHHHHHHHHHc---CCC-ceeCCHHHHhcCCCCCEEEEcCC
Confidence 67788887752 345666654 4555545443321112222221 221 23456778888655555665444
Q ss_pred hh----hHHHHHHcCCCEec-ccccc--cch-hhHHHHHHhhcceEEeccC
Q 039701 360 WN----SVLEAVSNGLPMVT-WPFFA--DQF-CNEKLVVQVLRIGVTIGAE 402 (476)
Q Consensus 360 ~~----s~~eal~~GvP~l~-~P~~~--DQ~-~~a~~v~e~~g~G~~l~~~ 402 (476)
.. -+.+|+.+|++++| =|+.. ++- .....+ ++.|+-..+...
T Consensus 77 ~~~h~~~~~~al~~gk~vl~EKP~~~~~~e~~~l~~~a-~~~g~~~~v~~~ 126 (330)
T 3e9m_A 77 NQGHYSAAKLALSQGKPVLLEKPFTLNAAEAEELFAIA-QEQGVFLMEAQK 126 (330)
T ss_dssp GGGHHHHHHHHHHTTCCEEECSSCCSSHHHHHHHHHHH-HHTTCCEEECCS
T ss_pred CHHHHHHHHHHHHCCCeEEEeCCCCCCHHHHHHHHHHH-HHcCCeEEEEEh
Confidence 33 36788999999886 35433 332 233344 577776665544
No 145
>2x7j_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene -1-carboxylate synthase; transferase, metal-binding; HET: TPP; 2.35A {Bacillus subtilis}
Probab=37.46 E-value=1.1e+02 Score=30.90 Aligned_cols=77 Identities=9% Similarity=0.060 Sum_probs=47.1
Q ss_pred HHHHHHHHHhCCCCeEEEEcCCCCCchhHHHHh-cCCCeEeec--------ccc--HHHhhhCCCceeeecccCh-----
Q 039701 297 LIELGLGLEATKKPFIWVIRPGDQAFEKFEERI-EGRGLLIRG--------WAP--QVVILSHPAIGGFLTHCGW----- 360 (476)
Q Consensus 297 ~~~i~~a~~~~~~~~i~~~~~~~~~~~~~~~~~-~~~nv~~~~--------~vp--q~~ll~~~~~~~~I~HgG~----- 360 (476)
-+.|++.|++.+++.|+.+.+... ..+-+.+ ..+.+.... +.- +..+-.++.+ +++|.|-
T Consensus 34 a~~lv~~L~~~GV~~vFg~PG~~~--~~l~dal~~~~~i~~i~~~hE~~Aa~aA~GyAr~tgkpgv--~~~TsGpG~~N~ 109 (604)
T 2x7j_A 34 IGSFIDEFALSGITDAVVCPGSRS--TPLAVLCAAHPDISVHVQIDERSAGFFALGLAKAKQRPVL--LICTSGTAAANF 109 (604)
T ss_dssp HHHHHHHHHHHTCCEEEECCCSTT--HHHHHHHHHCTTCEEEECSSHHHHHHHHHHHHHHHTSCEE--EEECSSHHHHTT
T ss_pred HHHHHHHHHHcCCCEEEECcCccc--HHHHHHHHhCCCceEEEecChHHHHHHHHHHHHhhCCCEE--EEECChhHHHHH
Confidence 345788888888888887766542 1121111 123343322 222 1223334555 9999996
Q ss_pred -hhHHHHHHcCCCEeccc
Q 039701 361 -NSVLEAVSNGLPMVTWP 377 (476)
Q Consensus 361 -~s~~eal~~GvP~l~~P 377 (476)
+.++||-+.++|+|++-
T Consensus 110 ~~gia~A~~~~vPlv~It 127 (604)
T 2x7j_A 110 YPAVVEAHYSRVPIIVLT 127 (604)
T ss_dssp HHHHHHHHHHTCCEEEEE
T ss_pred HHHHHHHhhcCCCEEEEe
Confidence 58889999999999985
No 146
>2vo1_A CTP synthase 1; pyrimidine biosynthesis, glutamine amidotransferase, phosphorylation, amidotransferase, cytidine 5-prime triphos synthetase, UTP; 2.8A {Homo sapiens} SCOP: c.37.1.10 PDB: 3ihl_A*
Probab=37.20 E-value=37 Score=30.28 Aligned_cols=40 Identities=20% Similarity=0.197 Sum_probs=33.7
Q ss_pred CcEEEEEcCC---CccChHHHHHHHHHHHHCCCeEEEEeCCcc
Q 039701 8 QLHFILFPFL---AQGHMIPMIDIARLLAQHGALVTIVTTPMN 47 (476)
Q Consensus 8 ~~~vl~~~~p---~~GHv~P~l~La~~L~~rGH~Vt~~~~~~~ 47 (476)
.+|++|++-+ +.|-=.-.-+||..|.+||++||..--.++
T Consensus 22 ~~KyIfVTGGVvS~lGKGi~aaSlg~lLk~~G~~Vt~~K~DPY 64 (295)
T 2vo1_A 22 SMKYILVTGGVISGIGKGIIASSVGTILKSCGLHVTSIKIDPY 64 (295)
T ss_dssp CCEEEEEEECSSSSSSHHHHHHHHHHHHHHTTCCEEEEEEECS
T ss_pred cceEEEEcCCcccccccHHHHHHHHHHHHHCCCcceeeecccc
Confidence 6899999987 667778889999999999999999855433
No 147
>3sr3_A Microcin immunity protein MCCF; csgid, structural genomics, MCCF protein, center for structu genomics of infectious diseases, immune system; 1.50A {Bacillus anthracis} PDB: 3gjz_A 3t5m_A* 3u1b_A* 3tyx_A*
Probab=37.16 E-value=53 Score=30.49 Aligned_cols=74 Identities=14% Similarity=0.138 Sum_probs=57.4
Q ss_pred CCHHHHHHHHHHHHhCCCCeEEEEcCCCCCchhHHHHhcCCCeEeeccccHHHhhhCCCceeeecccChhhHHHHHH--c
Q 039701 292 CSTRQLIELGLGLEATKKPFIWVIRPGDQAFEKFEERIEGRGLLIRGWAPQVVILSHPAIGGFLTHCGWNSVLEAVS--N 369 (476)
Q Consensus 292 ~~~~~~~~i~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~nv~~~~~vpq~~ll~~~~~~~~I~HgG~~s~~eal~--~ 369 (476)
.+.+....|.+++.+...+.||...++.. -..+.+++++..+-.+|.. ||=+.-...++-+++ .
T Consensus 63 ~d~~Ra~dL~~a~~Dp~i~aI~~~rGG~g------------~~rlL~~lD~~~i~~~PK~--~~GySDiTaL~~al~~~~ 128 (336)
T 3sr3_A 63 SIQERAKELNALIRNPNVSCIMSTIGGMN------------SNSLLPYIDYDAFQNNPKI--MIGYSDATALLLGIYAKT 128 (336)
T ss_dssp CHHHHHHHHHHHHHCTTEEEEEESCCCSC------------GGGGGGGSCHHHHHHSCCE--EEECGGGHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHhhCCCCCEEEEcccccc------------HHHHhhhcChhHHhhCCeE--EEEechHHHHHHHHHHhc
Confidence 34677778999999999999999988752 2344567777777778888 998888888888887 5
Q ss_pred CCCEeccccc
Q 039701 370 GLPMVTWPFF 379 (476)
Q Consensus 370 GvP~l~~P~~ 379 (476)
|++.+.=|..
T Consensus 129 G~~t~hGp~~ 138 (336)
T 3sr3_A 129 GIPTFYGPAL 138 (336)
T ss_dssp CCCEEECCCH
T ss_pred CceEEECChh
Confidence 8888777763
No 148
>3o1l_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.20A {Pseudomonas syringae PV}
Probab=36.82 E-value=2.4e+02 Score=25.53 Aligned_cols=105 Identities=10% Similarity=0.022 Sum_probs=0.0
Q ss_pred CCCCcEEEEEcCCCccChHHHHHHHHHHHHC--CCeEEEEeC--CcchhhhhhHhhhcccCCCceEEEEeeCCCcccCCC
Q 039701 5 AGSQLHFILFPFLAQGHMIPMIDIARLLAQH--GALVTIVTT--PMNAARFQNVIERGIQSGLRIQVIEFYFPCQEVGLP 80 (476)
Q Consensus 5 ~~~~~~vl~~~~p~~GHv~P~l~La~~L~~r--GH~Vt~~~~--~~~~~~~~~~~~~~~~~g~~i~~~~i~~~~~~~~~~ 80 (476)
++ ++||+++.++. || -+.+|..+-.+. +.+|..+.+ +...+..++. ++.+..++.....
T Consensus 103 ~~-~~ri~vl~Sg~-g~--nl~~ll~~~~~g~l~~~I~~Visn~~~~~~~A~~~---------gIp~~~~~~~~~~---- 165 (302)
T 3o1l_A 103 AQ-KKRVVLMASRE-SH--CLADLLHRWHSDELDCDIACVISNHQDLRSMVEWH---------DIPYYHVPVDPKD---- 165 (302)
T ss_dssp TS-CCEEEEEECSC-CH--HHHHHHHHHHTTCSCSEEEEEEESSSTTHHHHHTT---------TCCEEECCCCSSC----
T ss_pred CC-CcEEEEEEeCC-ch--hHHHHHHHHHCCCCCcEEEEEEECcHHHHHHHHHc---------CCCEEEcCCCcCC----
Q ss_pred CCCCCCCCCCCcCcHHHHHHHHHHchHHHHHHHHhcCCCCeEEEecCCC-chhHHHHhHcCCCcEEEecc
Q 039701 81 EGCESWDKLPSMALLPKFFAAIEMLRLPLETLFKEIQPKPGCLISDVCL-PWTVSSACKFNVPRIVFHGF 149 (476)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~D~vI~D~~~-~~~~~~A~~~giP~v~~~~~ 149 (476)
-....+.+.+.+++ .++|+||.-.+. .-...+...+.-.++-++++
T Consensus 166 ---------------------r~~~~~~~~~~l~~--~~~DliVlagym~IL~~~~l~~~~~~~INiHpS 212 (302)
T 3o1l_A 166 ---------------------KEPAFAEVSRLVGH--HQADVVVLARYMQILPPQLCREYAHQVINIHHS 212 (302)
T ss_dssp ---------------------CHHHHHHHHHHHHH--TTCSEEEESSCCSCCCTTHHHHTTTCEEEEESS
T ss_pred ---------------------HHHHHHHHHHHHHH--hCCCEEEHhHhhhhcCHHHHhhhhCCeEEeCcc
No 149
>2fsv_C NAD(P) transhydrogenase subunit beta; NAD(P) transhydrogenase subunits, oxidoreductas; HET: NAD NAP; 2.30A {Rhodospirillum rubrum} SCOP: c.31.1.4 PDB: 1e3t_A* 1hzz_C* 1nm5_C* 1u28_C* 1u2d_C* 1u2g_C* 2fr8_C* 2frd_C*
Probab=36.50 E-value=35 Score=28.49 Aligned_cols=34 Identities=24% Similarity=0.460 Sum_probs=27.2
Q ss_pred EEEEEcCCCcc-----ChHHHHHHHHHHHHCCCeEEEEeCC
Q 039701 10 HFILFPFLAQG-----HMIPMIDIARLLAQHGALVTIVTTP 45 (476)
Q Consensus 10 ~vl~~~~p~~G-----Hv~P~l~La~~L~~rGH~Vt~~~~~ 45 (476)
+|+|+| +|| --++...|++.|.++|.+|.|..+|
T Consensus 48 ~ViIVP--GYGmAVAqAQ~~v~el~~~L~~~G~~V~faIHP 86 (203)
T 2fsv_C 48 KVIIVP--GYGMAVAQAQHALREMADVLKKEGVEVSYAIHP 86 (203)
T ss_dssp EEEEEE--CHHHHHHTCHHHHHHHHHHHHHTTCEEEEEECT
T ss_pred cEEEEc--CchHhHHHHHHHHHHHHHHHHHcCCeEEEEecc
Confidence 677765 333 2357889999999999999999998
No 150
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=36.15 E-value=13 Score=34.06 Aligned_cols=32 Identities=19% Similarity=0.274 Sum_probs=26.9
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHHC-----C-CeEEEEeC
Q 039701 8 QLHFILFPFLAQGHMIPMIDIARLLAQH-----G-ALVTIVTT 44 (476)
Q Consensus 8 ~~~vl~~~~p~~GHv~P~l~La~~L~~r-----G-H~Vt~~~~ 44 (476)
++||+|+-.|..|. .+|..|+++ | |+|+++..
T Consensus 8 ~m~I~iiG~G~mG~-----~~a~~L~~~~~~~~g~~~V~~~~r 45 (317)
T 2qyt_A 8 PIKIAVFGLGGVGG-----YYGAMLALRAAATDGLLEVSWIAR 45 (317)
T ss_dssp CEEEEEECCSHHHH-----HHHHHHHHHHHHTTSSEEEEEECC
T ss_pred CCEEEEECcCHHHH-----HHHHHHHhCccccCCCCCEEEEEc
Confidence 57999999888884 568888888 9 99999875
No 151
>2an1_A Putative kinase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, transferase; 2.00A {Salmonella typhimurium}
Probab=35.87 E-value=18 Score=32.89 Aligned_cols=71 Identities=10% Similarity=-0.054 Sum_probs=42.6
Q ss_pred HHHHHHHHHHHhCCCCeEEEEcCCCCCchhHHHHhcCCCeEeeccccHHHhhhCCCceeeecccChhhHHHHHHc----C
Q 039701 295 RQLIELGLGLEATKKPFIWVIRPGDQAFEKFEERIEGRGLLIRGWAPQVVILSHPAIGGFLTHCGWNSVLEAVSN----G 370 (476)
Q Consensus 295 ~~~~~i~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~nv~~~~~vpq~~ll~~~~~~~~I~HgG~~s~~eal~~----G 370 (476)
+....+.+.+++.+..+.+.... .+....... .......+-..+++ +|.-||-||+.+++.. +
T Consensus 21 ~~~~~i~~~l~~~g~~v~~~~~~--------~~~~~~~~~---~~~~~~~~~~~~D~--vi~~GGDGT~l~a~~~~~~~~ 87 (292)
T 2an1_A 21 TTHEMLYRWLCDQGYEVIVEQQI--------AHELQLKNV---PTGTLAEIGQQADL--AVVVGGDGNMLGAARTLARYD 87 (292)
T ss_dssp CHHHHHHHHHHHTTCEEEEEHHH--------HHHTTCSSC---CEECHHHHHHHCSE--EEECSCHHHHHHHHHHHTTSS
T ss_pred HHHHHHHHHHHHCCCEEEEecch--------hhhcccccc---cccchhhcccCCCE--EEEEcCcHHHHHHHHHhhcCC
Confidence 44566778888888776543211 110000011 11122334445677 9999999999999743 7
Q ss_pred CCEecccc
Q 039701 371 LPMVTWPF 378 (476)
Q Consensus 371 vP~l~~P~ 378 (476)
+|.+.++.
T Consensus 88 ~P~lGI~~ 95 (292)
T 2an1_A 88 INVIGINR 95 (292)
T ss_dssp CEEEEBCS
T ss_pred CCEEEEEC
Confidence 89998884
No 152
>1djl_A Transhydrogenase DIII; rossmann fold dinucleotide binding fold reverse binding of N oxidoreductase; HET: NAP; 2.00A {Homo sapiens} SCOP: c.31.1.4 PDB: 1pt9_A* 1u31_A*
Probab=35.69 E-value=37 Score=28.47 Aligned_cols=34 Identities=26% Similarity=0.564 Sum_probs=27.3
Q ss_pred EEEEEcCCCcc-----ChHHHHHHHHHHHHCCCeEEEEeCC
Q 039701 10 HFILFPFLAQG-----HMIPMIDIARLLAQHGALVTIVTTP 45 (476)
Q Consensus 10 ~vl~~~~p~~G-----Hv~P~l~La~~L~~rGH~Vt~~~~~ 45 (476)
+|+|+| +|| --++...|++.|.++|.+|.|..+|
T Consensus 47 ~ViIVP--GYGmAVAqAQ~~v~el~~~L~~~G~~V~faIHP 85 (207)
T 1djl_A 47 SIIITP--GYGLCAAKAQYPIADLVKMLTEQGKKVRFGIHP 85 (207)
T ss_dssp EEEEEE--CHHHHHHTCHHHHHHHHHHHHHTTCEEEEEECT
T ss_pred eEEEEC--CchHHHHHHhHHHHHHHHHHHHCCCeEEEEeCc
Confidence 677765 333 2467889999999999999999998
No 153
>1ozh_A ALS, acetolactate synthase, catabolic; acetohydroxyacid synthase, thiamin diphosphate, lyase; HET: PGE HE3; 2.00A {Klebsiella pneumoniae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1ozg_A* 1ozf_A*
Probab=35.67 E-value=1.4e+02 Score=29.91 Aligned_cols=29 Identities=24% Similarity=0.236 Sum_probs=23.9
Q ss_pred CCCceeeecccCh------hhHHHHHHcCCCEecccc
Q 039701 348 HPAIGGFLTHCGW------NSVLEAVSNGLPMVTWPF 378 (476)
Q Consensus 348 ~~~~~~~I~HgG~------~s~~eal~~GvP~l~~P~ 378 (476)
++.+ +++|.|- +.++||-+.++|+|++--
T Consensus 73 ~p~v--~~~TsGpG~~N~~~~l~~A~~~~vPll~itg 107 (566)
T 1ozh_A 73 KAGV--ALVTSGPGCSNLITGMATANSEGDPVVALGG 107 (566)
T ss_dssp SCEE--EEECSTHHHHTTHHHHHHHHHHTCCEEEEEE
T ss_pred CCEE--EEEccChHHHHHHHHHHHHHhcCCCEEEEeC
Confidence 4555 9999996 688899999999999843
No 154
>2vqe_B 30S ribosomal protein S2; tRNA-binding, rRNA-binding, metal-binding, zinc-finger, translation; HET: TM2 PAR; 2.5A {Thermus thermophilus} SCOP: c.23.15.1 PDB: 1gix_E* 1hnw_B* 1hnx_B* 1hnz_B* 1hr0_B 1ibk_B* 1ibl_B* 1ibm_B 1j5e_B 1jgo_E* 1jgp_E* 1jgq_E* 1ml5_E* 1n32_B* 1n33_B* 1n34_B 1n36_B 1xmo_B* 1xmq_B* 1xnq_B* ...
Probab=35.44 E-value=75 Score=28.10 Aligned_cols=34 Identities=21% Similarity=0.266 Sum_probs=25.9
Q ss_pred CCCCeEEE-ecCCC-chhHHHHhHcCCCcEEEecch
Q 039701 117 QPKPGCLI-SDVCL-PWTVSSACKFNVPRIVFHGFS 150 (476)
Q Consensus 117 ~~~~D~vI-~D~~~-~~~~~~A~~~giP~v~~~~~~ 150 (476)
...||+|| .|... .-+..=|.++|||.|.++-+.
T Consensus 156 ~~~Pdll~V~Dp~~e~~Ai~EA~~l~IPvIaivDTn 191 (256)
T 2vqe_B 156 KRLPDAIFVVDPTKEAIAVREARKLFIPVIALADTD 191 (256)
T ss_dssp SSCCSEEEESCTTTTHHHHHHHHHTTCCCEECCCTT
T ss_pred ccCCCEEEEeCCccchHHHHHHHHcCCCEEEEecCC
Confidence 46899766 67654 568888999999999975543
No 155
>2ixd_A LMBE-related protein; hexamer, deacetylase, rossman fold, zinc-dependent metalloenzyme, hydrolase; 1.8A {Bacillus cereus}
Probab=35.25 E-value=63 Score=28.32 Aligned_cols=21 Identities=10% Similarity=0.123 Sum_probs=16.2
Q ss_pred HchHHHHHHHHhcCCCCeEEEec
Q 039701 104 MLRLPLETLFKEIQPKPGCLISD 126 (476)
Q Consensus 104 ~~~~~l~~~l~~~~~~~D~vI~D 126 (476)
.....+.+++++ .+||+|++-
T Consensus 84 ~~~~~l~~~ir~--~~PdvV~t~ 104 (242)
T 2ixd_A 84 EYIREIVKVIRT--YKPKLVFAP 104 (242)
T ss_dssp HHHHHHHHHHHH--HCCSEEEEE
T ss_pred HHHHHHHHHHHH--cCCCEEEEC
Confidence 345677888888 899999864
No 156
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=34.94 E-value=91 Score=29.02 Aligned_cols=87 Identities=14% Similarity=0.118 Sum_probs=51.5
Q ss_pred ceEEEecCCcccCCHHHHHHHHHHHHhCCCCeEEEEcCCCCCchhHHHHhcCCCeEeeccc-------------------
Q 039701 280 SAVYVCLGSLCDCSTRQLIELGLGLEATKKPFIWVIRPGDQAFEKFEERIEGRGLLIRGWA------------------- 340 (476)
Q Consensus 280 ~vv~vs~GS~~~~~~~~~~~i~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~nv~~~~~v------------------- 340 (476)
.+++++.|+.+. ...+..++++|.+.|.+|.+..... +.+.....++.+...-
T Consensus 6 ~il~~~~~~~Gh--v~~~~~La~~L~~~GheV~v~~~~~------~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (402)
T 3ia7_A 6 HILFANVQGHGH--VYPSLGLVSELARRGHRITYVTTPL------FADEVKAAGAEVVLYKSEFDTFHVPEVVKQEDAET 77 (402)
T ss_dssp EEEEECCSSHHH--HHHHHHHHHHHHHTTCEEEEEECHH------HHHHHHHTTCEEEECCCGGGTSSSSSSSCCTTHHH
T ss_pred EEEEEeCCCCcc--cccHHHHHHHHHhCCCEEEEEcCHH------HHHHHHHcCCEEEecccccccccccccccccchHH
Confidence 377888776442 2334558899999999998877432 2222222333332211
Q ss_pred --------------cH-HHhhh--CCCceeeecc--cChhhHHHHHHcCCCEecc
Q 039701 341 --------------PQ-VVILS--HPAIGGFLTH--CGWNSVLEAVSNGLPMVTW 376 (476)
Q Consensus 341 --------------pq-~~ll~--~~~~~~~I~H--gG~~s~~eal~~GvP~l~~ 376 (476)
++ ..++. ++++ +|+| .+.....-|-..|+|.+.+
T Consensus 78 ~~~~~~~~~~~~~~~~l~~~l~~~~pD~--Vi~d~~~~~~~~~aA~~~giP~v~~ 130 (402)
T 3ia7_A 78 QLHLVYVRENVAILRAAEEALGDNPPDL--VVYDVFPFIAGRLLAARWDRPAVRL 130 (402)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCCSE--EEEESTTHHHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccCCCE--EEECchHHHHHHHHHHhhCCCEEEE
Confidence 11 12332 5777 8887 4555666678899998876
No 157
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=34.84 E-value=20 Score=28.23 Aligned_cols=33 Identities=15% Similarity=0.152 Sum_probs=27.2
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHHCCCeEEEEeCC
Q 039701 8 QLHFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTTP 45 (476)
Q Consensus 8 ~~~vl~~~~p~~GHv~P~l~La~~L~~rGH~Vt~~~~~ 45 (476)
+.||+++-++..| ..+|+.|.++||+|+++...
T Consensus 7 ~~~viIiG~G~~G-----~~la~~L~~~g~~v~vid~~ 39 (140)
T 3fwz_A 7 CNHALLVGYGRVG-----SLLGEKLLASDIPLVVIETS 39 (140)
T ss_dssp CSCEEEECCSHHH-----HHHHHHHHHTTCCEEEEESC
T ss_pred CCCEEEECcCHHH-----HHHHHHHHHCCCCEEEEECC
Confidence 4589999876665 47899999999999999764
No 158
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=34.84 E-value=1e+02 Score=27.25 Aligned_cols=32 Identities=19% Similarity=0.007 Sum_probs=23.1
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHHCCCeEEEEeC
Q 039701 10 HFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTT 44 (476)
Q Consensus 10 ~vl~~~~p~~GHv~P~l~La~~L~~rGH~Vt~~~~ 44 (476)
|+++++-++. -+= .++|+.|+++|++|.++.-
T Consensus 16 k~~lVTGas~-gIG--~a~a~~la~~G~~V~~~~r 47 (280)
T 3pgx_A 16 RVAFITGAAR-GQG--RSHAVRLAAEGADIIACDI 47 (280)
T ss_dssp CEEEEESTTS-HHH--HHHHHHHHHTTCEEEEEEC
T ss_pred CEEEEECCCc-HHH--HHHHHHHHHCCCEEEEEec
Confidence 6777774443 222 4789999999999998753
No 159
>2qv7_A Diacylglycerol kinase DGKB; alpha-beta domain 1, beta sandwich domain 2, protein-ADP COM transferase; HET: ADP; 2.30A {Staphylococcus aureus} SCOP: e.52.1.2 PDB: 2qvl_A
Probab=34.81 E-value=62 Score=29.90 Aligned_cols=67 Identities=13% Similarity=0.037 Sum_probs=41.7
Q ss_pred HHHHHHHHHHHhCCCCeEEEEcCCCCCchhHHHHhcCCCeEeeccccHHHhhhCCCceeeecccChhhHHHHHH------
Q 039701 295 RQLIELGLGLEATKKPFIWVIRPGDQAFEKFEERIEGRGLLIRGWAPQVVILSHPAIGGFLTHCGWNSVLEAVS------ 368 (476)
Q Consensus 295 ~~~~~i~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~nv~~~~~vpq~~ll~~~~~~~~I~HgG~~s~~eal~------ 368 (476)
+.+..+...++..+..+.+....... ...+ . .........++ +|.-||-||+.|++.
T Consensus 42 ~~~~~i~~~L~~~g~~~~~~~t~~~~---~a~~-----------~-~~~~~~~~~d~--vvv~GGDGTv~~v~~~l~~~~ 104 (337)
T 2qv7_A 42 RELPDALIKLEKAGYETSAYATEKIG---DATL-----------E-AERAMHENYDV--LIAAGGDGTLNEVVNGIAEKP 104 (337)
T ss_dssp HHHHHHHHHHHHTTEEEEEEECCSTT---HHHH-----------H-HHHHTTTTCSE--EEEEECHHHHHHHHHHHTTCS
T ss_pred HHHHHHHHHHHHcCCeEEEEEecCcc---hHHH-----------H-HHHHhhcCCCE--EEEEcCchHHHHHHHHHHhCC
Confidence 45566888888877766554433211 1111 0 11112233455 999999999999853
Q ss_pred cCCCEecccc
Q 039701 369 NGLPMVTWPF 378 (476)
Q Consensus 369 ~GvP~l~~P~ 378 (476)
.++|+.++|.
T Consensus 105 ~~~pl~iIP~ 114 (337)
T 2qv7_A 105 NRPKLGVIPM 114 (337)
T ss_dssp SCCEEEEEEC
T ss_pred CCCcEEEecC
Confidence 4789999998
No 160
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=34.75 E-value=60 Score=30.33 Aligned_cols=30 Identities=20% Similarity=0.323 Sum_probs=22.3
Q ss_pred CCCceeeecc-cChhhHHHHHHcCCCEeccccc
Q 039701 348 HPAIGGFLTH-CGWNSVLEAVSNGLPMVTWPFF 379 (476)
Q Consensus 348 ~~~~~~~I~H-gG~~s~~eal~~GvP~l~~P~~ 379 (476)
.+++ +|+| .+..+..-|-..|+|.+.+-..
T Consensus 114 ~PD~--Vv~~~~~~~~~~aa~~~giP~v~~~~~ 144 (391)
T 3tsa_A 114 RPSV--LLVDVCALIGRVLGGLLDLPVVLHRWG 144 (391)
T ss_dssp CCSE--EEEETTCHHHHHHHHHTTCCEEEECCS
T ss_pred CCCE--EEeCcchhHHHHHHHHhCCCEEEEecC
Confidence 6887 7777 5566667778899999887443
No 161
>2dwc_A PH0318, 433AA long hypothetical phosphoribosylglycinamide transferase; purine ribonucleotide biosynthesis; HET: ADP; 1.70A {Pyrococcus horikoshii} PDB: 2czg_A*
Probab=34.65 E-value=2.5e+02 Score=26.54 Aligned_cols=35 Identities=20% Similarity=0.012 Sum_probs=25.8
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHHCCCeEEEEeCCcc
Q 039701 8 QLHFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTTPMN 47 (476)
Q Consensus 8 ~~~vl~~~~p~~GHv~P~l~La~~L~~rGH~Vt~~~~~~~ 47 (476)
.++|+++..+ .--..+++++.++||+|..+.....
T Consensus 19 ~~~ili~g~g-----~~g~~~~~a~~~~G~~v~~v~~~~~ 53 (433)
T 2dwc_A 19 AQKILLLGSG-----ELGKEIAIEAQRLGVEVVAVDRYAN 53 (433)
T ss_dssp CCEEEEESCS-----HHHHHHHHHHHHTTCEEEEEESSTT
T ss_pred CCEEEEECCC-----HHHHHHHHHHHHCCCEEEEEECCCC
Confidence 3589998543 2356788999999999998876543
No 162
>1yt5_A Inorganic polyphosphate/ATP-NAD kinase; domain 1: alpha/beta domain2: beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Thermotoga maritima}
Probab=34.60 E-value=14 Score=32.84 Aligned_cols=29 Identities=28% Similarity=0.424 Sum_probs=24.4
Q ss_pred CCCceeeecccChhhHHHHHHc---CCCEecccc
Q 039701 348 HPAIGGFLTHCGWNSVLEAVSN---GLPMVTWPF 378 (476)
Q Consensus 348 ~~~~~~~I~HgG~~s~~eal~~---GvP~l~~P~ 378 (476)
.+++ +|+-||-||+.+++.. ++|.+.++.
T Consensus 41 ~~D~--vv~~GGDGTll~~a~~~~~~~PilGIn~ 72 (258)
T 1yt5_A 41 TADL--IVVVGGDGTVLKAAKKAADGTPMVGFKA 72 (258)
T ss_dssp CCSE--EEEEECHHHHHHHHTTBCTTCEEEEEES
T ss_pred CCCE--EEEEeCcHHHHHHHHHhCCCCCEEEEEC
Confidence 4566 9999999999999876 788888864
No 163
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=34.57 E-value=24 Score=27.55 Aligned_cols=32 Identities=25% Similarity=0.364 Sum_probs=24.4
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHHCCCeEEEEeCC
Q 039701 9 LHFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTTP 45 (476)
Q Consensus 9 ~~vl~~~~p~~GHv~P~l~La~~L~~rGH~Vt~~~~~ 45 (476)
.||+++-.+..| ..+|+.|.++||+|+++...
T Consensus 7 ~~v~I~G~G~iG-----~~la~~L~~~g~~V~~id~~ 38 (141)
T 3llv_A 7 YEYIVIGSEAAG-----VGLVRELTAAGKKVLAVDKS 38 (141)
T ss_dssp CSEEEECCSHHH-----HHHHHHHHHTTCCEEEEESC
T ss_pred CEEEEECCCHHH-----HHHHHHHHHCCCeEEEEECC
Confidence 478888654333 57899999999999988653
No 164
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=34.52 E-value=1.5e+02 Score=28.78 Aligned_cols=147 Identities=14% Similarity=0.042 Sum_probs=74.2
Q ss_pred CceEEEecCCcccCCHHHHHHHHHHHHhCCCCeEEEEcCCCCCchhHHHHhcCCCeEeeccccHHHhhhCCCceeeeccc
Q 039701 279 GSAVYVCLGSLCDCSTRQLIELGLGLEATKKPFIWVIRPGDQAFEKFEERIEGRGLLIRGWAPQVVILSHPAIGGFLTHC 358 (476)
Q Consensus 279 ~~vv~vs~GS~~~~~~~~~~~i~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~nv~~~~~vpq~~ll~~~~~~~~I~Hg 358 (476)
+.|+.|..|... ..-++.|.+.+.++.+...... +.+.+.....++.+..---+...|..+++ +|.--
T Consensus 13 ~~vlVvGgG~va-------~~k~~~L~~~ga~V~vi~~~~~---~~~~~l~~~~~i~~~~~~~~~~~l~~~~l--Vi~at 80 (457)
T 1pjq_A 13 RDCLIVGGGDVA-------ERKARLLLEAGARLTVNALTFI---PQFTVWANEGMLTLVEGPFDETLLDSCWL--AIAAT 80 (457)
T ss_dssp CEEEEECCSHHH-------HHHHHHHHHTTBEEEEEESSCC---HHHHHHHTTTSCEEEESSCCGGGGTTCSE--EEECC
T ss_pred CEEEEECCCHHH-------HHHHHHHHhCcCEEEEEcCCCC---HHHHHHHhcCCEEEEECCCCccccCCccE--EEEcC
Confidence 458888887654 3344555667777776664322 23333322345544332223344556677 88877
Q ss_pred Chhh-----HHHHHHcCCCE--ecccccccchhhHHHHH-HhhcceEEeccCCCCCCcccccCCc-ccchhHHHHHHHHH
Q 039701 359 GWNS-----VLEAVSNGLPM--VTWPFFADQFCNEKLVV-QVLRIGVTIGAERPPSLADEERNGV-PVKKEDVKKAINML 429 (476)
Q Consensus 359 G~~s-----~~eal~~GvP~--l~~P~~~DQ~~~a~~v~-e~~g~G~~l~~~~~~~~~~~~~~~~-~~t~~~l~~~i~~l 429 (476)
|.-. ..+|-..|+|+ +--|-..|...-| .+. ..+-+|+. .+ +. ..-+..|++.|.+.
T Consensus 81 ~~~~~n~~i~~~a~~~~i~vn~~d~~e~~~~~~pa-~~~~~~l~iaIs--T~-----------Gksp~la~~ir~~ie~~ 146 (457)
T 1pjq_A 81 DDDTVNQRVSDAAESRRIFCNVVDAPKAASFIMPS-IIDRSPLMVAVS--SG-----------GTSPVLARLLREKLESL 146 (457)
T ss_dssp SCHHHHHHHHHHHHHTTCEEEETTCTTSSSEECCE-EEEETTEEEEEE--CT-----------TSCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCEEEECCCcccCceEeee-EEEeCCeEEEEE--CC-----------CCChHHHHHHHHHHHHh
Confidence 7654 33456678886 3333333322111 010 01223333 22 11 22357788888888
Q ss_pred hcCChhhHHHHHHHHHHHHHHHHH
Q 039701 430 MDEGEERDERRRRAREYGETAKTA 453 (476)
Q Consensus 430 l~~~~~~~~~r~~a~~l~~~~~~~ 453 (476)
+.+ .-..+-+.+.++.+++++.
T Consensus 147 l~~--~~~~~~~~~~~~R~~~~~~ 168 (457)
T 1pjq_A 147 LPQ--HLGQVARYAGQLRARVKKQ 168 (457)
T ss_dssp SCT--THHHHHHHHHHHHHHHHHH
T ss_pred cch--hHHHHHHHHHHHHHHHHhh
Confidence 842 2224555555555555543
No 165
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=34.47 E-value=28 Score=30.38 Aligned_cols=33 Identities=24% Similarity=0.324 Sum_probs=28.7
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHHCCCeEEEEeCC
Q 039701 8 QLHFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTTP 45 (476)
Q Consensus 8 ~~~vl~~~~p~~GHv~P~l~La~~L~~rGH~Vt~~~~~ 45 (476)
++||.|+-.|..|- .||+.|+++||+|+.+..+
T Consensus 6 ~mkI~IIG~G~~G~-----sLA~~L~~~G~~V~~~~~~ 38 (232)
T 3dfu_A 6 RLRVGIFDDGSSTV-----NMAEKLDSVGHYVTVLHAP 38 (232)
T ss_dssp CCEEEEECCSCCCS-----CHHHHHHHTTCEEEECSSG
T ss_pred CcEEEEEeeCHHHH-----HHHHHHHHCCCEEEEecCH
Confidence 67999999999985 6899999999999987653
No 166
>1u0t_A Inorganic polyphosphate/ATP-NAD kinase; alpha-beta, beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Mycobacterium tuberculosis} SCOP: e.52.1.1 PDB: 1u0r_A 1y3i_A* 1y3h_A
Probab=34.39 E-value=18 Score=33.23 Aligned_cols=32 Identities=16% Similarity=0.170 Sum_probs=24.3
Q ss_pred hhhCCCceeeecccChhhHHHHHHc----CCCEecccc
Q 039701 345 ILSHPAIGGFLTHCGWNSVLEAVSN----GLPMVTWPF 378 (476)
Q Consensus 345 ll~~~~~~~~I~HgG~~s~~eal~~----GvP~l~~P~ 378 (476)
....+++ +|.-||-||+.+++.. ++|++.++.
T Consensus 72 ~~~~~d~--vi~~GGDGT~l~a~~~~~~~~~pvlgi~~ 107 (307)
T 1u0t_A 72 AADGCEL--VLVLGGDGTFLRAAELARNASIPVLGVNL 107 (307)
T ss_dssp ----CCC--EEEEECHHHHHHHHHHHHHHTCCEEEEEC
T ss_pred cccCCCE--EEEEeCCHHHHHHHHHhccCCCCEEEEeC
Confidence 3445677 9999999999999754 899998875
No 167
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=34.27 E-value=1.2e+02 Score=26.89 Aligned_cols=32 Identities=22% Similarity=0.150 Sum_probs=23.1
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHHCCCeEEEEeC
Q 039701 10 HFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTT 44 (476)
Q Consensus 10 ~vl~~~~p~~GHv~P~l~La~~L~~rGH~Vt~~~~ 44 (476)
|+++++-++. -+= ..+|+.|+++|++|.++..
T Consensus 30 k~~lVTGas~-GIG--~aia~~la~~G~~V~~~~~ 61 (280)
T 4da9_A 30 PVAIVTGGRR-GIG--LGIARALAASGFDIAITGI 61 (280)
T ss_dssp CEEEEETTTS-HHH--HHHHHHHHHTTCEEEEEES
T ss_pred CEEEEecCCC-HHH--HHHHHHHHHCCCeEEEEeC
Confidence 6777774443 222 4789999999999998863
No 168
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=33.53 E-value=29 Score=32.29 Aligned_cols=32 Identities=22% Similarity=0.246 Sum_probs=26.3
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHHCCCeEEEEeC
Q 039701 8 QLHFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTT 44 (476)
Q Consensus 8 ~~~vl~~~~p~~GHv~P~l~La~~L~~rGH~Vt~~~~ 44 (476)
++||+++-.+..|. .+|..|+++||+|+++..
T Consensus 4 ~mki~iiG~G~~G~-----~~a~~L~~~g~~V~~~~r 35 (359)
T 1bg6_A 4 SKTYAVLGLGNGGH-----AFAAYLALKGQSVLAWDI 35 (359)
T ss_dssp CCEEEEECCSHHHH-----HHHHHHHHTTCEEEEECS
T ss_pred cCeEEEECCCHHHH-----HHHHHHHhCCCEEEEEeC
Confidence 57999998877774 478889999999998864
No 169
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=33.49 E-value=48 Score=26.41 Aligned_cols=33 Identities=24% Similarity=0.254 Sum_probs=25.6
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHHCCCeEEEEeCC
Q 039701 8 QLHFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTTP 45 (476)
Q Consensus 8 ~~~vl~~~~p~~GHv~P~l~La~~L~~rGH~Vt~~~~~ 45 (476)
..+|+++-.+..| ..+|+.|.++|++|+++...
T Consensus 19 ~~~v~IiG~G~iG-----~~la~~L~~~g~~V~vid~~ 51 (155)
T 2g1u_A 19 SKYIVIFGCGRLG-----SLIANLASSSGHSVVVVDKN 51 (155)
T ss_dssp CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEEESC
T ss_pred CCcEEEECCCHHH-----HHHHHHHHhCCCeEEEEECC
Confidence 5689998655444 55789999999999998754
No 170
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=33.41 E-value=1e+02 Score=29.08 Aligned_cols=35 Identities=20% Similarity=0.189 Sum_probs=25.6
Q ss_pred eEEEecCCcccCCHHHHHHHHHHHHhCCCCeEEEEcC
Q 039701 281 AVYVCLGSLCDCSTRQLIELGLGLEATKKPFIWVIRP 317 (476)
Q Consensus 281 vv~vs~GS~~~~~~~~~~~i~~a~~~~~~~~i~~~~~ 317 (476)
+++++.||.+ ...-+..+.++|.+.|.+|.+.+..
T Consensus 3 Ili~~~gt~G--hv~p~~~La~~L~~~Gh~V~v~~~~ 37 (404)
T 3h4t_A 3 VLITGCGSRG--DTEPLVALAARLRELGADARMCLPP 37 (404)
T ss_dssp EEEEEESSHH--HHHHHHHHHHHHHHTTCCEEEEECG
T ss_pred EEEEeCCCCc--cHHHHHHHHHHHHHCCCeEEEEeCH
Confidence 6777888764 2233455899999999999988754
No 171
>2bon_A Lipid kinase; DAG kinase, transferase; 1.90A {Escherichia coli} SCOP: e.52.1.2 PDB: 2jgr_A 2p1r_A
Probab=33.40 E-value=1.6e+02 Score=26.91 Aligned_cols=67 Identities=10% Similarity=-0.045 Sum_probs=43.2
Q ss_pred HHHHHHHHHHHhCCCCeEEEEcCCCCCchhHHHHhcCCCeEeeccccHHHhhhCCCceeeecccChhhHHHHH-------
Q 039701 295 RQLIELGLGLEATKKPFIWVIRPGDQAFEKFEERIEGRGLLIRGWAPQVVILSHPAIGGFLTHCGWNSVLEAV------- 367 (476)
Q Consensus 295 ~~~~~i~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~nv~~~~~vpq~~ll~~~~~~~~I~HgG~~s~~eal------- 367 (476)
+....+.+.+++.+..+.+....... ...+ . -...+...+++ +|.-||-||+.|++
T Consensus 44 ~~~~~i~~~l~~~g~~~~~~~t~~~~---~~~~-----------~-~~~~~~~~~d~--vvv~GGDGTl~~v~~~l~~~~ 106 (332)
T 2bon_A 44 LPLREAIMLLREEGMTIHVRVTWEKG---DAAR-----------Y-VEEARKFGVAT--VIAGGGDGTINEVSTALIQCE 106 (332)
T ss_dssp HHHHHHHHHHHTTTCCEEEEECCSTT---HHHH-----------H-HHHHHHHTCSE--EEEEESHHHHHHHHHHHHHCC
T ss_pred chHHHHHHHHHHcCCcEEEEEecCcc---hHHH-----------H-HHHHHhcCCCE--EEEEccchHHHHHHHHHhhcc
Confidence 45567888888888887665543221 1111 0 11122234566 99999999999874
Q ss_pred -HcCCCEecccc
Q 039701 368 -SNGLPMVTWPF 378 (476)
Q Consensus 368 -~~GvP~l~~P~ 378 (476)
..++|+.++|.
T Consensus 107 ~~~~~plgiiP~ 118 (332)
T 2bon_A 107 GDDIPALGILPL 118 (332)
T ss_dssp SSCCCEEEEEEC
T ss_pred cCCCCeEEEecC
Confidence 35789999998
No 172
>2r85_A PURP protein PF1517; ATP-grAsp superfamily, unknown function; HET: AMP; 1.70A {Pyrococcus furiosus} SCOP: c.30.1.8 d.142.1.9 PDB: 2r84_A* 2r86_A* 2r87_A*
Probab=33.23 E-value=41 Score=30.76 Aligned_cols=33 Identities=6% Similarity=0.076 Sum_probs=27.3
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHHCCCeEEEEeCCc
Q 039701 8 QLHFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTTPM 46 (476)
Q Consensus 8 ~~~vl~~~~p~~GHv~P~l~La~~L~~rGH~Vt~~~~~~ 46 (476)
+++|+++..+ -...+++++.++||+|.++....
T Consensus 2 ~m~Ililg~g------~~~~l~~a~~~~G~~v~~~~~~~ 34 (334)
T 2r85_A 2 KVRIATYASH------SALQILKGAKDEGFETIAFGSSK 34 (334)
T ss_dssp CSEEEEESST------THHHHHHHHHHTTCCEEEESCGG
T ss_pred ceEEEEECCh------hHHHHHHHHHhCCCEEEEEECCC
Confidence 4689998866 46789999999999999987653
No 173
>1xrs_B D-lysine 5,6-aminomutase beta subunit; TIM barrel, rossmann domain, PLP, cobalamin, 5'-deoxyad radical, adenosylcobalamin; HET: B12 PLP 5AD; 2.80A {Clostridium sticklandii} SCOP: c.23.6.1 d.230.4.1
Probab=33.01 E-value=41 Score=29.96 Aligned_cols=46 Identities=9% Similarity=0.041 Sum_probs=38.3
Q ss_pred CcEEEEEcCCCccChHHHHHHHHH--------HHHC-CCeEEEEeCCcchhhhhh
Q 039701 8 QLHFILFPFLAQGHMIPMIDIARL--------LAQH-GALVTIVTTPMNAARFQN 53 (476)
Q Consensus 8 ~~~vl~~~~p~~GHv~P~l~La~~--------L~~r-GH~Vt~~~~~~~~~~~~~ 53 (476)
+.+|++.+.++..|-....-++.. |..+ |++|+.+...--.+.+.+
T Consensus 120 ~~~Vvlatv~gD~HdiG~~iv~~~k~~~~~~~L~~~~G~eVi~LG~~vp~e~iv~ 174 (262)
T 1xrs_B 120 KIVVVGASTGTDAHTVGIDAIMNMKGYAGHYGLERYEMIDAYNLGSQVANEDFIK 174 (262)
T ss_dssp CEEEEEEEBTTCCCCHHHHHHHSTTCBTTBCCGGGCTTEEEEECCSSBCHHHHHH
T ss_pred CCEEEEEeCCCCCchHHHHHHhhhhcccchHHHHhcCCcEEEECCCCCCHHHHHH
Confidence 679999999999999999999987 9999 999999877544444433
No 174
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=32.92 E-value=39 Score=30.67 Aligned_cols=30 Identities=17% Similarity=0.217 Sum_probs=26.0
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHHCCCeEEEEe
Q 039701 9 LHFILFPFLAQGHMIPMIDIARLLAQHGALVTIVT 43 (476)
Q Consensus 9 ~~vl~~~~p~~GHv~P~l~La~~L~~rGH~Vt~~~ 43 (476)
.||.|+-.+.+|. ++|+.|.++||+|+...
T Consensus 6 ~kIgfIGLG~MG~-----~mA~~L~~~G~~V~v~d 35 (297)
T 4gbj_A 6 EKIAFLGLGNLGT-----PIAEILLEAGYELVVWN 35 (297)
T ss_dssp CEEEEECCSTTHH-----HHHHHHHHTTCEEEEC-
T ss_pred CcEEEEecHHHHH-----HHHHHHHHCCCeEEEEe
Confidence 3899999999995 68999999999999764
No 175
>3kjh_A CO dehydrogenase/acetyl-COA synthase complex, accessory protein COOC; Zn-bound dimer, nickel binding protein, ATPase; 1.90A {Carboxydothermus hydrogenoformans} PDB: 3kjg_A* 3kje_A 3kji_A*
Probab=32.82 E-value=29 Score=30.14 Aligned_cols=36 Identities=8% Similarity=0.060 Sum_probs=31.5
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHHCCCeEEEEeC
Q 039701 9 LHFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTT 44 (476)
Q Consensus 9 ~~vl~~~~p~~GHv~P~l~La~~L~~rGH~Vt~~~~ 44 (476)
+||+|..-|+-|-..=..+||..|+++|++|.++=.
T Consensus 1 mkI~vs~kGGvGKTt~a~~LA~~la~~g~~VlliD~ 36 (254)
T 3kjh_A 1 MKLAVAGKGGVGKTTVAAGLIKIMASDYDKIYAVDG 36 (254)
T ss_dssp CEEEEECSSSHHHHHHHHHHHHHHTTTCSCEEEEEE
T ss_pred CEEEEecCCCCCHHHHHHHHHHHHHHCCCeEEEEeC
Confidence 368887778889999999999999999999999844
No 176
>2bru_C NAD(P) transhydrogenase subunit beta; paramagnetic transhydrogenase, inner membrane, membrane, oxidoreductase, transmembrane; HET: NAD NAP; NMR {Escherichia coli}
Probab=32.66 E-value=35 Score=27.96 Aligned_cols=34 Identities=26% Similarity=0.425 Sum_probs=27.6
Q ss_pred EEEEEcCCCcc-----ChHHHHHHHHHHHHCCCeEEEEeCC
Q 039701 10 HFILFPFLAQG-----HMIPMIDIARLLAQHGALVTIVTTP 45 (476)
Q Consensus 10 ~vl~~~~p~~G-----Hv~P~l~La~~L~~rGH~Vt~~~~~ 45 (476)
+|+|+| +|| =-.+...|++.|.++|.+|.|..+|
T Consensus 32 ~ViIVP--GYGmAVAqAQ~~v~el~~~L~~~G~~V~faIHP 70 (186)
T 2bru_C 32 SVIITP--GYGMAVAQAQYPVAEITEKLRARGINVRFGIHP 70 (186)
T ss_dssp EEEEEC--SBHHHHTTTHHHHHHHHHHHHHHCCEEEEEECS
T ss_pred eEEEEC--ChHHHHHHHHHHHHHHHHHHHHCCCeEEEEecc
Confidence 677765 333 2358899999999999999999998
No 177
>1k99_A Upstream binding factor 1; alpha-helix, L-shape, DNA binding protein; NMR {Homo sapiens} SCOP: a.21.1.1
Probab=32.62 E-value=93 Score=22.76 Aligned_cols=41 Identities=5% Similarity=0.039 Sum_probs=33.3
Q ss_pred cccchhHHHHHHHHHhc--CChhhHHHHHHHHHHHHHHHHHHh
Q 039701 415 VPVKKEDVKKAINMLMD--EGEERDERRRRAREYGETAKTAIE 455 (476)
Q Consensus 415 ~~~t~~~l~~~i~~ll~--~~~~~~~~r~~a~~l~~~~~~~~~ 455 (476)
+.++..+|.+.|.+.+. ++++++.|.+.|++.+++..+++.
T Consensus 34 P~~~~~eisk~lg~~Wk~ls~eeK~~Y~~~A~~~k~~Y~~e~~ 76 (99)
T 1k99_A 34 PEMSNLDLTKILSKKYKELPEKKKMKYIQDFQREKQEFERNLA 76 (99)
T ss_dssp TTSCSHHHHHHHHHHHHHSCSTTHHHHHHHHHHHHHHHHHHHG
T ss_pred CCCCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35788899999998764 467889999999999999876643
No 178
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=32.48 E-value=28 Score=26.90 Aligned_cols=33 Identities=15% Similarity=0.313 Sum_probs=24.3
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHHCCCeEEEEeCC
Q 039701 8 QLHFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTTP 45 (476)
Q Consensus 8 ~~~vl~~~~p~~GHv~P~l~La~~L~~rGH~Vt~~~~~ 45 (476)
.+||+++-. |.+- ..+|+.|.++||+|+++...
T Consensus 4 ~m~i~IiG~---G~iG--~~~a~~L~~~g~~v~~~d~~ 36 (140)
T 1lss_A 4 GMYIIIAGI---GRVG--YTLAKSLSEKGHDIVLIDID 36 (140)
T ss_dssp -CEEEEECC---SHHH--HHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECC---CHHH--HHHHHHHHhCCCeEEEEECC
Confidence 368988844 5543 35789999999999998653
No 179
>1qkk_A DCTD, C4-dicarboxylate transport transcriptional regulatory protein; receiver domain, 2-component signal transduction; 1.7A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1l5z_A 1l5y_A
Probab=32.44 E-value=1.1e+02 Score=23.68 Aligned_cols=47 Identities=13% Similarity=0.031 Sum_probs=32.5
Q ss_pred cCCCEecccccccchhhHHHHHHhhcceEEeccCCCCCCcccccCCcccchhHHHHHHHHHhc
Q 039701 369 NGLPMVTWPFFADQFCNEKLVVQVLRIGVTIGAERPPSLADEERNGVPVKKEDVKKAINMLMD 431 (476)
Q Consensus 369 ~GvP~l~~P~~~DQ~~~a~~v~e~~g~G~~l~~~~~~~~~~~~~~~~~~t~~~l~~~i~~ll~ 431 (476)
..+|+|++--..+. ....... +.|+--.+.+ .++.++|..+|++++.
T Consensus 74 ~~~pii~ls~~~~~-~~~~~~~-~~g~~~~l~k--------------P~~~~~L~~~i~~~~~ 120 (155)
T 1qkk_A 74 PDLPMILVTGHGDI-PMAVQAI-QDGAYDFIAK--------------PFAADRLVQSARRAEE 120 (155)
T ss_dssp TTSCEEEEECGGGH-HHHHHHH-HTTCCEEEES--------------SCCHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCh-HHHHHHH-hcCCCeEEeC--------------CCCHHHHHHHHHHHHH
Confidence 47888887655543 3344442 6677656654 3899999999999986
No 180
>2uz1_A Benzaldehyde lyase; thiamine diphosphate, thiamine pyrophosphate, benzoin, flavoprotein; HET: TPP; 1.65A {Pseudomonas fluorescens} PDB: 2ag1_A* 2ag0_A* 2uz1_B* 3iae_A* 3iaf_A* 3d7k_A*
Probab=32.00 E-value=76 Score=31.75 Aligned_cols=30 Identities=13% Similarity=0.133 Sum_probs=24.2
Q ss_pred hCCCceeeecccCh------hhHHHHHHcCCCEecccc
Q 039701 347 SHPAIGGFLTHCGW------NSVLEAVSNGLPMVTWPF 378 (476)
Q Consensus 347 ~~~~~~~~I~HgG~------~s~~eal~~GvP~l~~P~ 378 (476)
.++.+ +++|.|- +.++||-+.++|+|++--
T Consensus 65 g~p~v--~~~TsGpG~~N~~~~l~~A~~~~~Pll~itg 100 (563)
T 2uz1_A 65 AKLGV--ALVTAGGGFTNAVTPIANAWLDRTPVLFLTG 100 (563)
T ss_dssp TSCEE--EEECTTHHHHTTHHHHHHHHHHTCCEEEEEE
T ss_pred CCCEE--EEEccCccHHHHHHHHHHHHhcCCCEEEEeC
Confidence 34555 9999986 688999999999999843
No 181
>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}
Probab=31.91 E-value=2.6e+02 Score=25.78 Aligned_cols=108 Identities=15% Similarity=0.096 Sum_probs=59.9
Q ss_pred eEEEecCCcccCCHHHHHHHHHHHHhC-CCCeEEEEcCCCCCchhHHHHhcCCCeEeeccccHHHhhhCCCceeeecccC
Q 039701 281 AVYVCLGSLCDCSTRQLIELGLGLEAT-KKPFIWVIRPGDQAFEKFEERIEGRGLLIRGWAPQVVILSHPAIGGFLTHCG 359 (476)
Q Consensus 281 vv~vs~GS~~~~~~~~~~~i~~a~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~nv~~~~~vpq~~ll~~~~~~~~I~HgG 359 (476)
+..|.+|.+.. ..+.++... +.+++.++..+ ++... .....++ ..+-...+++..+++.+++--.-
T Consensus 8 vgiiG~G~~g~-------~~~~~l~~~~~~~l~av~d~~---~~~~~-~a~~~g~--~~~~~~~~ll~~~~~D~V~i~tp 74 (359)
T 3e18_A 8 LVIVGYGGMGS-------YHVTLASAADNLEVHGVFDIL---AEKRE-AAAQKGL--KIYESYEAVLADEKVDAVLIATP 74 (359)
T ss_dssp EEEECCSHHHH-------HHHHHHHTSTTEEEEEEECSS---HHHHH-HHHTTTC--CBCSCHHHHHHCTTCCEEEECSC
T ss_pred EEEECcCHHHH-------HHHHHHHhCCCcEEEEEEcCC---HHHHH-HHHhcCC--ceeCCHHHHhcCCCCCEEEEcCC
Confidence 77888887652 234455554 45555554433 22222 1222344 23566788888666665765444
Q ss_pred hh----hHHHHHHcCCCEec-ccccc--cchh-hHHHHHHhhcceEEeccC
Q 039701 360 WN----SVLEAVSNGLPMVT-WPFFA--DQFC-NEKLVVQVLRIGVTIGAE 402 (476)
Q Consensus 360 ~~----s~~eal~~GvP~l~-~P~~~--DQ~~-~a~~v~e~~g~G~~l~~~ 402 (476)
.. -+.+|+.+|++++| =|+.. ++-. ....+ ++.|+-..+...
T Consensus 75 ~~~h~~~~~~al~aGkhVl~EKP~a~~~~ea~~l~~~a-~~~g~~~~v~~~ 124 (359)
T 3e18_A 75 NDSHKELAISALEAGKHVVCEKPVTMTSEDLLAIMDVA-KRVNKHFMVHQN 124 (359)
T ss_dssp GGGHHHHHHHHHHTTCEEEEESSCCSSHHHHHHHHHHH-HHHTCCEEEECG
T ss_pred cHHHHHHHHHHHHCCCCEEeeCCCcCCHHHHHHHHHHH-HHhCCeEEEEee
Confidence 33 46688999999887 35433 3333 33333 566765555443
No 182
>1q6z_A BFD, BFDC, benzoylformate decarboxylase; lyase, carbon-carbon, mandelate catabolism, T thiazolone diphosphate, inhibitor, high resolution; HET: TZD; 1.00A {Pseudomonas putida} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1po7_A* 1pi3_A* 3fsj_X* 1mcz_A* 1bfd_A* 2fwn_A* 3fzn_A* 2fn3_A* 2v3w_A* 1yno_A* 3f6b_X* 3f6e_X*
Probab=31.68 E-value=67 Score=31.82 Aligned_cols=74 Identities=9% Similarity=-0.061 Sum_probs=41.7
Q ss_pred HHHHHHHHhCCCCeEEEEcCCCCCchhHHHHhcCCCeEeec--------ccc--HHHhhhCCCceeeecccCh------h
Q 039701 298 IELGLGLEATKKPFIWVIRPGDQAFEKFEERIEGRGLLIRG--------WAP--QVVILSHPAIGGFLTHCGW------N 361 (476)
Q Consensus 298 ~~i~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~nv~~~~--------~vp--q~~ll~~~~~~~~I~HgG~------~ 361 (476)
+.|++.|++.+++.++.+.+... ..+-+.+ .+++.... +.- +..+-.++.+ +++|.|- +
T Consensus 6 ~~l~~~L~~~GV~~vfg~PG~~~--~~l~~al-~~~i~~i~~~~E~~Aa~~A~Gyar~tg~~~v--~~~tsGpG~~N~~~ 80 (528)
T 1q6z_A 6 GTTYELLRRQGIDTVFGNPGSNA--LPFLKDF-PEDFRYILALQEACVVGIADGYAQASRKPAF--INLHSAAGTGNAMG 80 (528)
T ss_dssp HHHHHHHHHTTCCEEEECCCGGG--HHHHTTC-CTTCEEEECSSHHHHHHHHHHHHHHHTSCEE--EEEEHHHHHHHTHH
T ss_pred HHHHHHHHHCCCCEEEECCCcch--HHHHHHH-hhcCcEEEECcHHHHHHHHHHHHHHhCCCEE--EEEcCChHHHHHHH
Confidence 34667777777777776655431 1121111 12233222 111 1112234555 8888875 4
Q ss_pred hHHHHHHcCCCEecc
Q 039701 362 SVLEAVSNGLPMVTW 376 (476)
Q Consensus 362 s~~eal~~GvP~l~~ 376 (476)
.++||-+.++|+|++
T Consensus 81 ~l~~A~~~~~Pll~i 95 (528)
T 1q6z_A 81 ALSNAWNSHSPLIVT 95 (528)
T ss_dssp HHHHHHHTTCCEEEE
T ss_pred HHHHHhhcCCCEEEE
Confidence 788999999999999
No 183
>3li6_A Calcium-binding protein; calcium signaling protein, assemble free energy, dynamic behaviour, cytoskeleton, metal binding; 2.50A {Entamoeba histolytica}
Probab=31.64 E-value=67 Score=20.51 Aligned_cols=51 Identities=16% Similarity=0.086 Sum_probs=32.6
Q ss_pred CCcccchhHHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHH
Q 039701 413 NGVPVKKEDVKKAINMLMDEGEERDERRRRAREYGETAKTAIEEGGSSYLNIKLLIKDIL 472 (476)
Q Consensus 413 ~~~~~t~~~l~~~i~~ll~~~~~~~~~r~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~i~ 472 (476)
++|.++.+++...++.+-. .-....+...++. .+..|.+.-..++|++.+.
T Consensus 13 ~~G~i~~~e~~~~l~~~~~--------~~~~~~~~~~~~~-~D~~~~g~i~~~ef~~~~~ 63 (66)
T 3li6_A 13 GDGAVSYEEVKAFVSKKRA--------IKNEQLLQLIFKS-IDADGNGEIDQNEFAKFYG 63 (66)
T ss_dssp CSSSCCHHHHHHHHHHHHH--------HHHHHHHHHHHHH-HCTTCSSSCCHHHHHHHHT
T ss_pred CCCcccHHHHHHHHHHccC--------CCcHHHHHHHHHH-HCCCCCCCCCHHHHHHHHH
Confidence 4689999999999987632 1122334444443 3556666677778877654
No 184
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=31.63 E-value=35 Score=31.55 Aligned_cols=33 Identities=15% Similarity=0.130 Sum_probs=27.8
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHHCCCeEEEEeCC
Q 039701 8 QLHFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTTP 45 (476)
Q Consensus 8 ~~~vl~~~~p~~GHv~P~l~La~~L~~rGH~Vt~~~~~ 45 (476)
.+||+++-.|+.|- .+|..|++.||+|+++...
T Consensus 3 ~mkI~IiGaG~~G~-----~~a~~L~~~g~~V~~~~r~ 35 (335)
T 3ghy_A 3 LTRICIVGAGAVGG-----YLGARLALAGEAINVLARG 35 (335)
T ss_dssp CCCEEEESCCHHHH-----HHHHHHHHTTCCEEEECCH
T ss_pred CCEEEEECcCHHHH-----HHHHHHHHCCCEEEEEECh
Confidence 45899999888884 5789999999999999864
No 185
>3n7t_A Macrophage binding protein; seattle structural genomics center for infectious disease, S macrophage, pathogenic fungus, coccidioidomycosis; 2.10A {Coccidioides immitis} SCOP: c.23.16.0
Probab=31.52 E-value=92 Score=27.33 Aligned_cols=37 Identities=14% Similarity=0.031 Sum_probs=27.7
Q ss_pred cEEEEEcCCCcc-----------ChHHHHHHHHHHHHCCCeEEEEeCC
Q 039701 9 LHFILFPFLAQG-----------HMIPMIDIARLLAQHGALVTIVTTP 45 (476)
Q Consensus 9 ~~vl~~~~p~~G-----------Hv~P~l~La~~L~~rGH~Vt~~~~~ 45 (476)
+||+|+.....+ ...=++.--..|.+.|++|+++++.
T Consensus 10 kkvlvvlt~~~~~~~~~g~~tG~~~~E~~~p~~~l~~aG~~V~~aSp~ 57 (247)
T 3n7t_A 10 RKALLAITSAHPPFWPDGKRTGLFFSEALHPFNELTAAGFEVDVASET 57 (247)
T ss_dssp SEEEEECCCCCCBCSTTSCBCCBCHHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CeEEEEECCCCcccCCCCCCCcccHHHHHHHHHHHHHCCCEEEEEeCC
Confidence 478888776432 2455667778889999999999964
No 186
>3nm9_A HMG-D, high mobility group protein D; DNA bending, non-sequence-specific, HMG chromosomal protein; HET: DNA; 2.85A {Drosophila melanogaster} SCOP: a.21.1.1 PDB: 1e7j_A* 1hma_A 1qrv_A*
Probab=31.51 E-value=85 Score=21.28 Aligned_cols=39 Identities=18% Similarity=0.189 Sum_probs=31.4
Q ss_pred ccchhHHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHH
Q 039701 416 PVKKEDVKKAINMLMDEGEERDERRRRAREYGETAKTAI 454 (476)
Q Consensus 416 ~~t~~~l~~~i~~ll~~~~~~~~~r~~a~~l~~~~~~~~ 454 (476)
.++..+|.+.|.+.+.+-++++.|.+.|++.+++..+++
T Consensus 28 ~~~~~eisk~lg~~Wk~ls~K~~y~~~A~~~k~~y~~~~ 66 (73)
T 3nm9_A 28 GIKVTEVAKRGGELWRAMKDKSEWEAKAAKAKDDYDRAV 66 (73)
T ss_dssp SCCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHH
Confidence 477889999999987654448899999999999887653
No 187
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=31.38 E-value=32 Score=31.26 Aligned_cols=32 Identities=25% Similarity=0.244 Sum_probs=26.8
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHHCCCeEEEEeCC
Q 039701 9 LHFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTTP 45 (476)
Q Consensus 9 ~~vl~~~~p~~GHv~P~l~La~~L~~rGH~Vt~~~~~ 45 (476)
.+|.|+-.+.+|+ .+|..|+++||+|+++...
T Consensus 16 ~~I~VIG~G~mG~-----~iA~~la~~G~~V~~~d~~ 47 (302)
T 1f0y_A 16 KHVTVIGGGLMGA-----GIAQVAAATGHTVVLVDQT 47 (302)
T ss_dssp CEEEEECCSHHHH-----HHHHHHHHTTCEEEEECSC
T ss_pred CEEEEECCCHHHH-----HHHHHHHhCCCeEEEEECC
Confidence 3799999888886 5788999999999988654
No 188
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*
Probab=31.37 E-value=23 Score=36.91 Aligned_cols=118 Identities=9% Similarity=0.094 Sum_probs=79.4
Q ss_pred eeccccHHHhhhCCCceeeecccChhhHHHHHHcCCCEecccccccchhhHHHHHHhhcceEEeccCCCCCCcccccCCc
Q 039701 336 IRGWAPQVVILSHPAIGGFLTHCGWNSVLEAVSNGLPMVTWPFFADQFCNEKLVVQVLRIGVTIGAERPPSLADEERNGV 415 (476)
Q Consensus 336 ~~~~vpq~~ll~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~~a~~v~e~~g~G~~l~~~~~~~~~~~~~~~~ 415 (476)
+.++.+-.++|..+++ +||=- +..+.|.+..+.|+|....-.|++.. +..|. ..+..+ .-+++ .
T Consensus 603 ~~~~~di~~ll~~aD~--lITDy-SSv~fD~~~l~kPiif~~~D~~~Y~~-----~~rg~--y~d~~~-~~pg~-----~ 666 (729)
T 3l7i_A 603 VSNYNDVSELFLISDC--LITDY-SSVMFDYGILKRPQFFFAYDIDKYDK-----GLRGF--YMNYME-DLPGP-----I 666 (729)
T ss_dssp CTTCSCHHHHHHTCSE--EEESS-CTHHHHHGGGCCCEEEECTTTTTTTS-----SCCSB--SSCTTS-SSSSC-----E
T ss_pred CCCCcCHHHHHHHhCE--EEeec-hHHHHhHHhhCCCEEEecCCHHHHhh-----ccCCc--ccChhH-hCCCC-----e
Confidence 4456677789999999 99984 45778999999999988776665432 11232 222210 00111 1
Q ss_pred ccchhHHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHH
Q 039701 416 PVKKEDVKKAINMLMDEGEERDERRRRAREYGETAKTAIEEGGSSYLNIKLLIKDILQ 473 (476)
Q Consensus 416 ~~t~~~l~~~i~~ll~~~~~~~~~r~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~i~~ 473 (476)
.-+.++|.++|.....+. ..|+++.+++.+++-.. ++|.++.+.++.+.+....
T Consensus 667 ~~~~~eL~~~i~~~~~~~---~~~~~~~~~~~~~~~~~-~dg~as~ri~~~i~~~~~~ 720 (729)
T 3l7i_A 667 YTEPYGLAKELKNLDKVQ---QQYQEKIDAFYDRFCSV-DNGKASQYIGDLIHKDIKE 720 (729)
T ss_dssp ESSHHHHHHHHTTHHHHH---HHTHHHHHHHHHHHSTT-CCSCHHHHHHHHHHHHHHH
T ss_pred ECCHHHHHHHHhhhhccc---hhHHHHHHHHHHHhCCc-cCChHHHHHHHHHHhcCcC
Confidence 457788999998876422 37788888888877654 6788888888888776653
No 189
>3irs_A Uncharacterized protein BB4693; structural genomics, PSI-2, protein structure initiative, TI protein; HET: GOL; 1.76A {Bordetella bronchiseptica} PDB: 3k4w_A
Probab=31.30 E-value=1.2e+02 Score=27.16 Aligned_cols=135 Identities=11% Similarity=-0.036 Sum_probs=70.9
Q ss_pred CHHHHHHHHHHHHhCCCCeEEEEcCCCCCchhHHHHhcCCCeEeeccccHHHhh-hCCCceeeecccChhhHHHHHHc--
Q 039701 293 STRQLIELGLGLEATKKPFIWVIRPGDQAFEKFEERIEGRGLLIRGWAPQVVIL-SHPAIGGFLTHCGWNSVLEAVSN-- 369 (476)
Q Consensus 293 ~~~~~~~i~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~nv~~~~~vpq~~ll-~~~~~~~~I~HgG~~s~~eal~~-- 369 (476)
....+..+++.+++.+..+++=.+.... +. .....-.....++ .+|+++.+|.|||.....+++..
T Consensus 136 ~d~~~~~~~~~a~e~glpv~iH~~~~~~----------~~-~~~~~p~~~~~v~~~~P~l~ivl~H~G~~~~~~~~~l~~ 204 (291)
T 3irs_A 136 DDRRLYPLYAFCEDNGIPVIMMTGGNAG----------PD-ITYTNPEHIDRVLGDFPDLTVVSSHGNWPWVQEIIHVAF 204 (291)
T ss_dssp TCGGGHHHHHHHHHTTCCEEEECSSSCS----------SS-GGGGCHHHHHHHHHHCTTCCEEEEGGGTTCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHcCCeEEEeCCCCCC----------CC-CccCCHHHHHHHHHHCCCCEEEeecCCcccHHHHHHHHh
Confidence 3466778889999999998766654311 00 0000001122333 46788889999998877776653
Q ss_pred CCCEeccccc--cc-ch---hhHHHHHHhhcceEEeccCCCCCCcccccCCcccchhHHHHHHHHH-hcCChhhHHHHHH
Q 039701 370 GLPMVTWPFF--AD-QF---CNEKLVVQVLRIGVTIGAERPPSLADEERNGVPVKKEDVKKAINML-MDEGEERDERRRR 442 (476)
Q Consensus 370 GvP~l~~P~~--~D-Q~---~~a~~v~e~~g~G~~l~~~~~~~~~~~~~~~~~~t~~~l~~~i~~l-l~~~~~~~~~r~~ 442 (476)
..|-+-+-.. .. .+ .....+ +..|.-..+--.+ .+-.+.....+.+.++ +++.+..+-+..|
T Consensus 205 ~~~nvy~~~Sg~~~~~~~~~~~~~~~-~~~g~drllfgSD----------~P~~~~~~~~~~~~~l~l~~e~~~~i~~~N 273 (291)
T 3irs_A 205 RRPNLYLSPDMYLYNLPGHADFIQAA-NSFLADRMLFGTA----------YPMCPLKEYTEWFLTLPIKPDAMEKILHGN 273 (291)
T ss_dssp HCTTEEEECGGGGSSSTTHHHHHHHH-TTGGGGTBCCCCC----------BTSSCHHHHHHHHHTSSCCHHHHHHHHTHH
T ss_pred HCCCeEecHHHHhccCCCHHHHHHHH-HHhCcceEEEecC----------CCCCCHHHHHHHHHHCCCCHHHHHHHHHHH
Confidence 2333322221 11 12 112233 3555544442221 2345555666666665 4444445567778
Q ss_pred HHHHHHH
Q 039701 443 AREYGET 449 (476)
Q Consensus 443 a~~l~~~ 449 (476)
|+++-..
T Consensus 274 A~rl~~~ 280 (291)
T 3irs_A 274 AERLLAQ 280 (291)
T ss_dssp HHHHHHH
T ss_pred HHHHhCc
Confidence 8877654
No 190
>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*
Probab=31.13 E-value=73 Score=28.30 Aligned_cols=42 Identities=19% Similarity=0.195 Sum_probs=27.2
Q ss_pred EEEEEcCCCc-cChHHHHHHHHHHHHCCCeEEEEeCCcchhhhhh
Q 039701 10 HFILFPFLAQ-GHMIPMIDIARLLAQHGALVTIVTTPMNAARFQN 53 (476)
Q Consensus 10 ~vl~~~~p~~-GHv~P~l~La~~L~~rGH~Vt~~~~~~~~~~~~~ 53 (476)
|+++++-++. +-+= ..+|+.|+++|++|+++.-....+.+++
T Consensus 27 k~vlVTGasg~~GIG--~~ia~~l~~~G~~V~~~~r~~~~~~~~~ 69 (280)
T 3nrc_A 27 KKILITGLLSNKSIA--YGIAKAMHREGAELAFTYVGQFKDRVEK 69 (280)
T ss_dssp CEEEECCCCSTTCHH--HHHHHHHHHTTCEEEEEECTTCHHHHHH
T ss_pred CEEEEECCCCCCCHH--HHHHHHHHHcCCEEEEeeCchHHHHHHH
Confidence 6777775431 1121 5789999999999998876543333333
No 191
>3rfo_A Methionyl-tRNA formyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta structure, cytosol; HET: PGE; 2.40A {Bacillus anthracis}
Probab=30.97 E-value=2.7e+02 Score=25.32 Aligned_cols=34 Identities=18% Similarity=0.146 Sum_probs=25.0
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHHCCCeEEEEeCCc
Q 039701 8 QLHFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTTPM 46 (476)
Q Consensus 8 ~~~vl~~~~p~~GHv~P~l~La~~L~~rGH~Vt~~~~~~ 46 (476)
-+||+|+-.|..+ +..-+.|.++||+|..+.+..
T Consensus 4 mmrIvf~Gtp~fa-----~~~L~~L~~~~~~v~~Vvt~p 37 (317)
T 3rfo_A 4 MIKVVFMGTPDFS-----VPVLRRLIEDGYDVIGVVTQP 37 (317)
T ss_dssp TSEEEEECCSTTH-----HHHHHHHHHTTCEEEEEECCC
T ss_pred ceEEEEEeCCHHH-----HHHHHHHHHCCCcEEEEEeCC
Confidence 3689999888554 344577788899999776643
No 192
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=30.94 E-value=32 Score=32.42 Aligned_cols=29 Identities=31% Similarity=0.297 Sum_probs=24.8
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHHCCCeEEEE
Q 039701 9 LHFILFPFLAQGHMIPMIDIARLLAQHGALVTIV 42 (476)
Q Consensus 9 ~~vl~~~~p~~GHv~P~l~La~~L~~rGH~Vt~~ 42 (476)
|||+|+--+--| +.+|..|+++||+|+++
T Consensus 2 m~V~IVGaGpaG-----l~~A~~L~~~G~~v~v~ 30 (412)
T 4hb9_A 2 MHVGIIGAGIGG-----TCLAHGLRKHGIKVTIY 30 (412)
T ss_dssp CEEEEECCSHHH-----HHHHHHHHHTTCEEEEE
T ss_pred CEEEEECcCHHH-----HHHHHHHHhCCCCEEEE
Confidence 689999777555 77899999999999998
No 193
>2q28_A Oxalyl-COA decarboxylase; lyase, oxalate degradation, thiami diphosphate, lyase; HET: TPP ADP MES; 1.74A {Escherichia coli} PDB: 2q27_A* 2q29_A*
Probab=30.89 E-value=88 Score=31.27 Aligned_cols=30 Identities=30% Similarity=0.411 Sum_probs=23.9
Q ss_pred hCCCceeeecccCh------hhHHHHHHcCCCEecccc
Q 039701 347 SHPAIGGFLTHCGW------NSVLEAVSNGLPMVTWPF 378 (476)
Q Consensus 347 ~~~~~~~~I~HgG~------~s~~eal~~GvP~l~~P~ 378 (476)
.++.+ +++|.|- +.++||-+.++|+|++--
T Consensus 69 g~pgv--~~~TsGpG~~N~~~gi~~A~~~~vPll~itg 104 (564)
T 2q28_A 69 QKPGI--CLTVSAPGFLNGLTALANATVNGFPMIMISG 104 (564)
T ss_dssp SSCEE--EEECSHHHHHHHHHHHHHHHHHTCCEEEEEE
T ss_pred CCCEE--EEEccCchHHHHHHHHHHHHhcCCCEEEEeC
Confidence 34555 9999996 467799999999999843
No 194
>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}
Probab=30.81 E-value=37 Score=29.66 Aligned_cols=20 Identities=30% Similarity=0.248 Sum_probs=18.0
Q ss_pred HHHHHHHHHCCCeEEEEeCC
Q 039701 26 IDIARLLAQHGALVTIVTTP 45 (476)
Q Consensus 26 l~La~~L~~rGH~Vt~~~~~ 45 (476)
.++|++|+++|++|+++..+
T Consensus 33 ~aiA~~~~~~Ga~V~lv~~~ 52 (232)
T 2gk4_A 33 KIITETLLSAGYEVCLITTK 52 (232)
T ss_dssp HHHHHHHHHTTCEEEEEECT
T ss_pred HHHHHHHHHCCCEEEEEeCC
Confidence 46899999999999999876
No 195
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=30.73 E-value=44 Score=30.41 Aligned_cols=33 Identities=24% Similarity=0.012 Sum_probs=27.6
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHHCCCeEEEEeCCc
Q 039701 8 QLHFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTTPM 46 (476)
Q Consensus 8 ~~~vl~~~~p~~GHv~P~l~La~~L~~rGH~Vt~~~~~~ 46 (476)
++||+|+-.|+.|- .+|..|. .||+|+++....
T Consensus 2 ~mkI~IiGaGa~G~-----~~a~~L~-~g~~V~~~~r~~ 34 (307)
T 3ego_A 2 SLKIGIIGGGSVGL-----LCAYYLS-LYHDVTVVTRRQ 34 (307)
T ss_dssp CCEEEEECCSHHHH-----HHHHHHH-TTSEEEEECSCH
T ss_pred CCEEEEECCCHHHH-----HHHHHHh-cCCceEEEECCH
Confidence 46899999988885 5788899 999999998654
No 196
>1col_A Colicin A; antibacterial protein; 2.40A {Escherichia coli} SCOP: f.1.1.1
Probab=30.30 E-value=21 Score=30.11 Aligned_cols=39 Identities=10% Similarity=0.138 Sum_probs=32.8
Q ss_pred hhhHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHhc
Q 039701 434 EERDERRRRAREYGETAKTAIEEGGSSYLNIKLLIKDILQQA 475 (476)
Q Consensus 434 ~~~~~~r~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~i~~~~ 475 (476)
.+|+.|++.|+++++.+++. .|-..++.++.++.++++-
T Consensus 29 ~~G~Ky~~~A~eiA~~l~~~---kGKkIRs~~dAl~s~eK~k 67 (204)
T 1col_A 29 HLGDKYKAIAKDIADNIKNF---QGKTIRSFDDAMASLNKIT 67 (204)
T ss_dssp HHCHHHHHHHHHHHHHHHTC---TTCCCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHh---cCCccCCHHHHHHHHHHHh
Confidence 56779999999999999865 7888888999999888753
No 197
>3lrx_A Putative hydrogenase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.60A {Pyrococcus furiosus}
Probab=30.24 E-value=36 Score=27.48 Aligned_cols=35 Identities=17% Similarity=0.208 Sum_probs=28.5
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHHCCCeEEEEeCCc
Q 039701 9 LHFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTTPM 46 (476)
Q Consensus 9 ~~vl~~~~p~~GHv~P~l~La~~L~~rGH~Vt~~~~~~ 46 (476)
.+++|++-++ | +.|++++++.|.++|.+|+++ ...
T Consensus 24 ~~~llIaGG~-G-ItPl~sm~~~l~~~~~~v~l~-g~r 58 (158)
T 3lrx_A 24 GKILAIGAYT-G-IVEVYPIAKAWQEIGNDVTTL-HVT 58 (158)
T ss_dssp SEEEEEEETT-H-HHHHHHHHHHHHHHTCEEEEE-EEC
T ss_pred CeEEEEEccC-c-HHHHHHHHHHHHhcCCcEEEE-EeC
Confidence 4788887444 4 999999999999999999998 544
No 198
>2x5n_A SPRPN10, 26S proteasome regulatory subunit RPN10; nuclear protein, nucleus, ubiquitin; 1.30A {Schizosaccharomyces pombe}
Probab=30.19 E-value=1.6e+02 Score=24.56 Aligned_cols=61 Identities=11% Similarity=0.138 Sum_probs=37.9
Q ss_pred cEE-EEEcCCCccChHHHHHHHHHHHHCCCeEEEEeCCc---chhhhhhHhhhcccCCCceEEEEee
Q 039701 9 LHF-ILFPFLAQGHMIPMIDIARLLAQHGALVTIVTTPM---NAARFQNVIERGIQSGLRIQVIEFY 71 (476)
Q Consensus 9 ~~v-l~~~~p~~GHv~P~l~La~~L~~rGH~Vt~~~~~~---~~~~~~~~~~~~~~~g~~i~~~~i~ 71 (476)
-|| +|+..+...+-.....+++.|++.|++|.++.-.. +.+ ++...+... .|.+-.|+.+|
T Consensus 107 ~riiil~~~~~~~~~~~~~~~a~~lk~~gi~v~~Ig~G~~~~~~~-l~~la~~~n-~~~~s~~~~~~ 171 (192)
T 2x5n_A 107 QRIVAFVGSPIVEDEKNLIRLAKRMKKNNVAIDIIHIGELQNESA-LQHFIDAAN-SSDSCHLVSIP 171 (192)
T ss_dssp EEEEEEECSCCSSCHHHHHHHHHHHHHTTEEEEEEEESCC---CH-HHHHHHHHC-STTCCEEEEEC
T ss_pred ceEEEEEECCCCCCchhHHHHHHHHHHCCCEEEEEEeCCCCccHH-HHHHHHhcc-CCCceEEEEec
Confidence 344 45555555677888999999999999999874422 223 555444332 23345666655
No 199
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=29.89 E-value=2.9e+02 Score=25.23 Aligned_cols=110 Identities=17% Similarity=0.145 Sum_probs=61.1
Q ss_pred ceEEEecCCcccCCHHHHHHHHHHHHhC--CCCeEEEEcCCCCCchhHHHHhcCCCeEeeccccHHHhhhCCCceeeecc
Q 039701 280 SAVYVCLGSLCDCSTRQLIELGLGLEAT--KKPFIWVIRPGDQAFEKFEERIEGRGLLIRGWAPQVVILSHPAIGGFLTH 357 (476)
Q Consensus 280 ~vv~vs~GS~~~~~~~~~~~i~~a~~~~--~~~~i~~~~~~~~~~~~~~~~~~~~nv~~~~~vpq~~ll~~~~~~~~I~H 357 (476)
.+..|.+|.+.. ..+.++.+. +.+++.++..+....+.+.++. ++ ..+-...+++..+++.+++--
T Consensus 15 rvgiiG~G~~g~-------~~~~~l~~~~~~~~lvav~d~~~~~~~~~~~~~---~~--~~~~~~~~ll~~~~~D~V~i~ 82 (354)
T 3q2i_A 15 RFALVGCGRIAN-------NHFGALEKHADRAELIDVCDIDPAALKAAVERT---GA--RGHASLTDMLAQTDADIVILT 82 (354)
T ss_dssp EEEEECCSTTHH-------HHHHHHHHTTTTEEEEEEECSSHHHHHHHHHHH---CC--EEESCHHHHHHHCCCSEEEEC
T ss_pred eEEEEcCcHHHH-------HHHHHHHhCCCCeEEEEEEcCCHHHHHHHHHHc---CC--ceeCCHHHHhcCCCCCEEEEC
Confidence 378899998762 344566554 5566655544321112222221 33 335567788875555446643
Q ss_pred cCh----hhHHHHHHcCCCEecc-ccccc--c-hhhHHHHHHhhcceEEeccC
Q 039701 358 CGW----NSVLEAVSNGLPMVTW-PFFAD--Q-FCNEKLVVQVLRIGVTIGAE 402 (476)
Q Consensus 358 gG~----~s~~eal~~GvP~l~~-P~~~D--Q-~~~a~~v~e~~g~G~~l~~~ 402 (476)
--. .-+.+|+.+|++++|= |+..+ + ......+ ++.|+-..+...
T Consensus 83 tp~~~h~~~~~~al~~gk~v~~EKP~a~~~~~~~~l~~~a-~~~g~~~~v~~~ 134 (354)
T 3q2i_A 83 TPSGLHPTQSIECSEAGFHVMTEKPMATRWEDGLEMVKAA-DKAKKHLFVVKQ 134 (354)
T ss_dssp SCGGGHHHHHHHHHHTTCEEEECSSSCSSHHHHHHHHHHH-HHHTCCEEECCG
T ss_pred CCcHHHHHHHHHHHHCCCCEEEeCCCcCCHHHHHHHHHHH-HHhCCeEEEEEc
Confidence 322 3466789999998873 65432 3 2333444 577776665544
No 200
>1qo0_D AMIR; binding protein, gene regulator, receptor; 2.25A {Pseudomonas aeruginosa} SCOP: c.23.1.3
Probab=29.71 E-value=1.9e+02 Score=23.45 Aligned_cols=54 Identities=7% Similarity=0.012 Sum_probs=34.7
Q ss_pred HHHHHH---cCCCEecccccccchhhHHHHHHhhcceEEeccCCCCCCcccccCCcccchhHHHHHHHHHhcC
Q 039701 363 VLEAVS---NGLPMVTWPFFADQFCNEKLVVQVLRIGVTIGAERPPSLADEERNGVPVKKEDVKKAINMLMDE 432 (476)
Q Consensus 363 ~~eal~---~GvP~l~~P~~~DQ~~~a~~v~e~~g~G~~l~~~~~~~~~~~~~~~~~~t~~~l~~~i~~ll~~ 432 (476)
+.+.+. ..+|+|++--..|. ......- +.|+--.+.+- ++.++|..+|+.++..
T Consensus 69 l~~~~~~~~~~~~ii~lt~~~~~-~~~~~a~-~~ga~~~l~KP--------------~~~~~L~~~l~~~~~~ 125 (196)
T 1qo0_D 69 IAALLAAGTPRTTLVALVEYESP-AVLSQII-ELECHGVITQP--------------LDAHRVLPVLVSARRI 125 (196)
T ss_dssp HHHHHHHSCTTCEEEEEECCCSH-HHHHHHH-HHTCSEEEESS--------------CCGGGHHHHHHHHHHH
T ss_pred HHHHHhccCCCCCEEEEEcCCCh-HHHHHHH-HcCCCeeEecC--------------cCHHHHHHHHHHHHHH
Confidence 444444 45777777555444 3445552 67776566543 8889999999988853
No 201
>3hr8_A Protein RECA; alpha and beta proteins (A/B, A+B), ATP-binding, cytoplasm, damage, DNA recombination, DNA repair, DNA-binding; 1.95A {Thermotoga maritima}
Probab=29.59 E-value=2.6e+02 Score=25.94 Aligned_cols=38 Identities=8% Similarity=0.103 Sum_probs=32.4
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHHCCCeEEEEeCCcc
Q 039701 10 HFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTTPMN 47 (476)
Q Consensus 10 ~vl~~~~p~~GHv~P~l~La~~L~~rGH~Vt~~~~~~~ 47 (476)
-++|+-.|+.|-..=++.++..+...|..|.|+.++..
T Consensus 63 i~~I~GppGsGKSTLal~la~~~~~~gg~VlyId~E~s 100 (356)
T 3hr8_A 63 IVEIFGQESSGKTTLALHAIAEAQKMGGVAAFIDAEHA 100 (356)
T ss_dssp EEEEEESTTSSHHHHHHHHHHHHHHTTCCEEEEESSCC
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHhcCCeEEEEecccc
Confidence 35677778999999999999999999999999988654
No 202
>3pdi_B Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=29.54 E-value=37 Score=33.12 Aligned_cols=34 Identities=21% Similarity=0.275 Sum_probs=27.2
Q ss_pred HHHHHHHhcCCCCeEEEecCCCchhHHHHhHcCCCcEEE
Q 039701 108 PLETLFKEIQPKPGCLISDVCLPWTVSSACKFNVPRIVF 146 (476)
Q Consensus 108 ~l~~~l~~~~~~~D~vI~D~~~~~~~~~A~~~giP~v~~ 146 (476)
.+++++++ .+||++|.+.. ...+|+++|||++.+
T Consensus 366 ~le~~i~~--~~pDllig~~~---~~~~a~k~gip~~~~ 399 (458)
T 3pdi_B 366 DLEHAARA--GQAQLVIGNSH---ALASARRLGVPLLRA 399 (458)
T ss_dssp HHHHHHHH--HTCSEEEECTT---HHHHHHHTTCCEEEC
T ss_pred HHHHHHHh--cCCCEEEEChh---HHHHHHHcCCCEEEe
Confidence 35666777 79999999855 567999999999973
No 203
>3pnx_A Putative sulfurtransferase DSRE; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; HET: MSE GOL; 1.92A {Syntrophomonas wolfei}
Probab=29.40 E-value=82 Score=25.60 Aligned_cols=46 Identities=13% Similarity=-0.036 Sum_probs=36.5
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHHCCCeEEEEeCCcchhhhhhH
Q 039701 9 LHFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTTPMNAARFQNV 54 (476)
Q Consensus 9 ~~vl~~~~p~~GHv~P~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~ 54 (476)
.-..++..+..--.+|.+-||..-++-|++|+++.+......+++-
T Consensus 6 kl~II~~sG~~dka~~a~ilA~~AaA~G~eV~iFfTf~Gl~~l~K~ 51 (160)
T 3pnx_A 6 KMNLLLFSGDYDKALASLIIANAAREMEIEVTIFCAFWGLLLLRDP 51 (160)
T ss_dssp EEEEEECCCCHHHHHHHHHHHHHHHHTTCEEEEEECGGGGGGGBCG
T ss_pred cEEEEEecCCHHHHHHHHHHHHHHHHcCCCEEEEEeehhHHHhccC
Confidence 3455666677888999999999999999999999887666655543
No 204
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=29.08 E-value=26 Score=34.61 Aligned_cols=34 Identities=9% Similarity=0.085 Sum_probs=27.9
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHHCCCeEEEEeCCc
Q 039701 8 QLHFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTTPM 46 (476)
Q Consensus 8 ~~~vl~~~~p~~GHv~P~l~La~~L~~rGH~Vt~~~~~~ 46 (476)
|+||+|+--+.-| +.+|+.|.++|++||++....
T Consensus 42 KprVVIIGgG~AG-----l~~A~~L~~~~~~VtLId~~~ 75 (502)
T 4g6h_A 42 KPNVLILGSGWGA-----ISFLKHIDTKKYNVSIISPRS 75 (502)
T ss_dssp SCEEEEECSSHHH-----HHHHHHSCTTTCEEEEEESSS
T ss_pred CCCEEEECCcHHH-----HHHHHHhhhCCCcEEEECCCC
Confidence 7899999866555 578899999999999997654
No 205
>3qvl_A Putative hydantoin racemase; isomerase; HET: 5HY; 1.82A {Klebsiella pneumoniae subsp} PDB: 3qvk_A* 3qvj_A
Probab=28.99 E-value=2.6e+02 Score=24.29 Aligned_cols=46 Identities=7% Similarity=-0.254 Sum_probs=26.8
Q ss_pred HHHHHHHHchHHHHHHHHhcCCCCeEEEecCCCchh-HHHHhHcCCCcEE
Q 039701 97 KFFAAIEMLRLPLETLFKEIQPKPGCLISDVCLPWT-VSSACKFNVPRIV 145 (476)
Q Consensus 97 ~~~~~~~~~~~~l~~~l~~~~~~~D~vI~D~~~~~~-~~~A~~~giP~v~ 145 (476)
.+......+.+.+.++.+ .++|+||..-++..+ ..+.+.+++|++-
T Consensus 50 d~~~a~~~l~~~~~~l~~---~g~d~iviaCnt~~~l~~lr~~~~iPvig 96 (245)
T 3qvl_A 50 DEAIAAVGVLEQIRAGRE---QGVDGHVIASFGDPGLLAARELAQGPVIG 96 (245)
T ss_dssp HHHHHHHHHHHHHHHHHH---HTCSEEEEC-CCCTTHHHHHHHCSSCEEE
T ss_pred HHHHHHHHHHHHHHHHHH---CCCCEEEEeCCChhHHHHHHHHcCCCEEC
Confidence 333444444455554444 489998876655333 4555667999885
No 206
>1wxl_A Single-strand recognition protein; FACT, SSRP1, HMG, DNA binding protein; NMR {Drosophila melanogaster}
Probab=28.89 E-value=84 Score=21.30 Aligned_cols=39 Identities=10% Similarity=0.124 Sum_probs=32.9
Q ss_pred ccchhHHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHH
Q 039701 416 PVKKEDVKKAINMLMDEGEERDERRRRAREYGETAKTAI 454 (476)
Q Consensus 416 ~~t~~~l~~~i~~ll~~~~~~~~~r~~a~~l~~~~~~~~ 454 (476)
.++-.+|.+.|.+.+.+-++++.|.+.|++.+++..+++
T Consensus 28 ~~~~~eisk~lg~~Wk~l~eK~~y~~~A~~~k~~y~~e~ 66 (73)
T 1wxl_A 28 GIKVTEIAKKGGEMWKELKDKSKWEDAAAKDKQRYHDEM 66 (73)
T ss_dssp TCCHHHHHHHHHHHHHTCTTHHHHHHHHHHHHHHHHTTT
T ss_pred CCCHHHHHHHHHHHHHhhHhhHHHHHHHHHHHHHHHHHH
Confidence 477789999999988877888999999999998877553
No 207
>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0
Probab=28.82 E-value=1.5e+02 Score=26.10 Aligned_cols=33 Identities=30% Similarity=0.155 Sum_probs=23.9
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHHCCCeEEEEeCC
Q 039701 10 HFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTTP 45 (476)
Q Consensus 10 ~vl~~~~p~~GHv~P~l~La~~L~~rGH~Vt~~~~~ 45 (476)
|+++++-++.| += ..+|+.|+++|++|+++.-.
T Consensus 11 k~~lVTGas~g-IG--~a~a~~l~~~G~~V~~~~r~ 43 (281)
T 3s55_A 11 KTALITGGARG-MG--RSHAVALAEAGADIAICDRC 43 (281)
T ss_dssp CEEEEETTTSH-HH--HHHHHHHHHTTCEEEEEECC
T ss_pred CEEEEeCCCch-HH--HHHHHHHHHCCCeEEEEeCC
Confidence 67777755443 22 47899999999999988653
No 208
>2hy5_A Putative sulfurtransferase DSRE; DSRE, DSRF, sulfur, structural genomics, PSI, protein initiative, berkeley structural genomics center, BSGC, TRAN; 1.72A {Allochromatium vinosum} SCOP: c.114.1.1 PDB: 2hyb_A
Probab=28.72 E-value=71 Score=24.68 Aligned_cols=26 Identities=8% Similarity=0.023 Sum_probs=21.6
Q ss_pred cChHHHHHHHHHHHHCCCeE-EEEeCC
Q 039701 20 GHMIPMIDIARLLAQHGALV-TIVTTP 45 (476)
Q Consensus 20 GHv~P~l~La~~L~~rGH~V-t~~~~~ 45 (476)
-.....+.+|..+.+.||+| +++-..
T Consensus 15 ~~~~~al~~a~a~~~~g~~v~~vff~~ 41 (130)
T 2hy5_A 15 QASDSAYQFAKAALEKGHEIFRVFFYH 41 (130)
T ss_dssp THHHHHHHHHHHHHHTTCEEEEEEECG
T ss_pred HHHHHHHHHHHHHHhcCCeeCEEEEec
Confidence 44677899999999999999 877655
No 209
>3ty2_A 5'-nucleotidase SURE; surviVal protein, phosphatase, hydrolase; HET: MSE; 1.89A {Coxiella burnetii} SCOP: c.106.1.0
Probab=28.72 E-value=57 Score=28.96 Aligned_cols=40 Identities=20% Similarity=0.110 Sum_probs=30.6
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHHCCCeEEEEeCCcchh
Q 039701 8 QLHFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTTPMNAA 49 (476)
Q Consensus 8 ~~~vl~~~~p~~GHv~P~l~La~~L~~rGH~Vt~~~~~~~~~ 49 (476)
++|||+.-=-+. |---+..|++.|.+ +|+|+++.+.....
T Consensus 11 ~m~ILlTNDDGi-~apGi~aL~~~l~~-~~~V~VVAP~~~~S 50 (261)
T 3ty2_A 11 KLRLLLSNDDGV-YAKGLAILAKTLAD-LGEVDVVAPDRNRS 50 (261)
T ss_dssp CCEEEEECSSCT-TCHHHHHHHHHHTT-TSEEEEEEESSCCT
T ss_pred CCeEEEEcCCCC-CCHHHHHHHHHHHh-cCCEEEEecCCCCc
Confidence 588888765444 55668889999877 89999999875544
No 210
>3grc_A Sensor protein, kinase; protein structure initiative II(PSI II), NYSGXRC, 11025B, structural genomics; 2.21A {Polaromonas SP}
Probab=28.68 E-value=1.7e+02 Score=21.93 Aligned_cols=109 Identities=15% Similarity=0.024 Sum_probs=58.3
Q ss_pred CCHHHHHHHHHHHHhCCCCeEEEEcCCCCCchhHHHHhcCCCeEeeccccHHHhhhCCCceeeecccChhhHHHHHH---
Q 039701 292 CSTRQLIELGLGLEATKKPFIWVIRPGDQAFEKFEERIEGRGLLIRGWAPQVVILSHPAIGGFLTHCGWNSVLEAVS--- 368 (476)
Q Consensus 292 ~~~~~~~~i~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~nv~~~~~vpq~~ll~~~~~~~~I~HgG~~s~~eal~--- 368 (476)
.+......+...++..++.+.......+. .+.+.. .+..+++.++- +.....-.+.+.+.
T Consensus 14 d~~~~~~~l~~~l~~~g~~v~~~~~~~~a-~~~l~~--~~~dlvi~d~~--------------l~~~~g~~~~~~l~~~~ 76 (140)
T 3grc_A 14 DDPDIARLLNLMLEKGGFDSDMVHSAAQA-LEQVAR--RPYAAMTVDLN--------------LPDQDGVSLIRALRRDS 76 (140)
T ss_dssp SCHHHHHHHHHHHHHTTCEEEEECSHHHH-HHHHHH--SCCSEEEECSC--------------CSSSCHHHHHHHHHTSG
T ss_pred CCHHHHHHHHHHHHHCCCeEEEECCHHHH-HHHHHh--CCCCEEEEeCC--------------CCCCCHHHHHHHHHhCc
Confidence 34555566777788888875444322110 111111 23344444331 11111113344444
Q ss_pred --cCCCEecccccccchhhHHHHHHhhcceEEeccCCCCCCcccccCCcccchhHHHHHHHHHhcC
Q 039701 369 --NGLPMVTWPFFADQFCNEKLVVQVLRIGVTIGAERPPSLADEERNGVPVKKEDVKKAINMLMDE 432 (476)
Q Consensus 369 --~GvP~l~~P~~~DQ~~~a~~v~e~~g~G~~l~~~~~~~~~~~~~~~~~~t~~~l~~~i~~ll~~ 432 (476)
..+|+|++--..|........ .+.|+--.+.+- ++.++|..+|+++++.
T Consensus 77 ~~~~~~ii~~s~~~~~~~~~~~~-~~~g~~~~l~kP--------------~~~~~l~~~i~~~l~~ 127 (140)
T 3grc_A 77 RTRDLAIVVVSANAREGELEFNS-QPLAVSTWLEKP--------------IDENLLILSLHRAIDN 127 (140)
T ss_dssp GGTTCEEEEECTTHHHHHHHHCC-TTTCCCEEECSS--------------CCHHHHHHHHHHHHHH
T ss_pred ccCCCCEEEEecCCChHHHHHHh-hhcCCCEEEeCC--------------CCHHHHHHHHHHHHHh
Confidence 377888776665554443244 366666566553 8999999999999863
No 211
>3nxa_A Protein S100-A16; S100 family, calcium binding protein, APO, EF-hand calcium binding proteins, S100 proteins, protein dynamics, binding protein; 2.10A {Homo sapiens} SCOP: a.39.1.0 PDB: 2l0u_A 2l0v_A 2l50_A 2l51_A
Probab=28.60 E-value=27 Score=25.76 Aligned_cols=58 Identities=5% Similarity=0.044 Sum_probs=36.9
Q ss_pred CcccchhHHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHhc
Q 039701 414 GVPVKKEDVKKAINMLMDEGEERDERRRRAREYGETAKTAIEEGGSSYLNIKLLIKDILQQA 475 (476)
Q Consensus 414 ~~~~t~~~l~~~i~~ll~~~~~~~~~r~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~i~~~~ 475 (476)
+|.++.++|+..++..+.+.- +.. ..-..+.+.+++ ++..|.+.-..++|+..+..++
T Consensus 28 ~G~Is~~EL~~~l~~~~~~~l-~~~--~~~~ev~~~i~~-~D~d~DG~Idf~EF~~~m~~~~ 85 (100)
T 3nxa_A 28 KNKISKSSFREMLQKELNHML-SDT--GNRKAADKLIQN-LDANHDGRISFDEYWTLIGGIT 85 (100)
T ss_dssp TTCBCHHHHHHHHHHHSTTTT-CSS--HHHHHHHHHHHH-SCCCSSCCBCHHHHHHHHHHHH
T ss_pred CCeEcHHHHHHHHHHHccccc-ccc--ccHHHHHHHHHH-hCCCCCCCCcHHHHHHHHHHHH
Confidence 579999999999988753210 000 111234444443 5777888888899988877654
No 212
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=28.56 E-value=72 Score=24.86 Aligned_cols=33 Identities=9% Similarity=0.188 Sum_probs=24.2
Q ss_pred CCCeEEEecCCCc--hhHHHHhHc-------CCCcEEEecch
Q 039701 118 PKPGCLISDVCLP--WTVSSACKF-------NVPRIVFHGFS 150 (476)
Q Consensus 118 ~~~D~vI~D~~~~--~~~~~A~~~-------giP~v~~~~~~ 150 (476)
.+||+||.|...+ -+..+++.. ++|.+.++...
T Consensus 56 ~~~DlillD~~MP~mdG~el~~~ir~~~~~~~ipvI~lTa~~ 97 (134)
T 3to5_A 56 GDFDFVVTDWNMPGMQGIDLLKNIRADEELKHLPVLMITAEA 97 (134)
T ss_dssp HCCSEEEEESCCSSSCHHHHHHHHHHSTTTTTCCEEEEESSC
T ss_pred CCCCEEEEcCCCCCCCHHHHHHHHHhCCCCCCCeEEEEECCC
Confidence 5899999999876 356666654 58888776554
No 213
>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2
Probab=28.40 E-value=69 Score=27.74 Aligned_cols=38 Identities=24% Similarity=0.231 Sum_probs=25.7
Q ss_pred CCCCCCCCcEEEEEcCCCccChHHHHHHHHHHHHCCCeEEEEeC
Q 039701 1 MASQAGSQLHFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTT 44 (476)
Q Consensus 1 m~~~~~~~~~vl~~~~p~~GHv~P~l~La~~L~~rGH~Vt~~~~ 44 (476)
|.++.+ |+++++ ++.|-+= ..+|+.|+++|++|+++.-
T Consensus 1 m~~l~~---k~vlVT-Gas~gIG--~~ia~~l~~~G~~V~~~~r 38 (246)
T 2ag5_A 1 MGRLDG---KVIILT-AAAQGIG--QAAALAFAREGAKVIATDI 38 (246)
T ss_dssp CCTTTT---CEEEES-STTSHHH--HHHHHHHHHTTCEEEEEES
T ss_pred CCCCCC---CEEEEe-CCCcHHH--HHHHHHHHHCCCEEEEEEC
Confidence 555544 566666 4444332 4788999999999998864
No 214
>2lpm_A Two-component response regulator; transcription regulator; NMR {Sinorhizobium meliloti}
Probab=28.32 E-value=52 Score=25.33 Aligned_cols=34 Identities=26% Similarity=0.164 Sum_probs=23.3
Q ss_pred HHHHhcCCCCeEEEecCCCch--hHHHHh---HcCCCcEEE
Q 039701 111 TLFKEIQPKPGCLISDVCLPW--TVSSAC---KFNVPRIVF 146 (476)
Q Consensus 111 ~~l~~~~~~~D~vI~D~~~~~--~~~~A~---~~giP~v~~ 146 (476)
+.+++ .+||+||.|...+. +..+++ ..++|++.+
T Consensus 47 ~~~~~--~~~DlvllDi~mP~~~G~el~~~lr~~~ipvI~l 85 (123)
T 2lpm_A 47 DIARK--GQFDIAIIDVNLDGEPSYPVADILAERNVPFIFA 85 (123)
T ss_dssp HHHHH--CCSSEEEECSSSSSCCSHHHHHHHHHTCCSSCCB
T ss_pred HHHHh--CCCCEEEEecCCCCCCHHHHHHHHHcCCCCEEEE
Confidence 34556 79999999997752 444444 458887764
No 215
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=28.20 E-value=30 Score=31.38 Aligned_cols=32 Identities=19% Similarity=0.150 Sum_probs=27.4
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHHCCCeEEEEeC
Q 039701 8 QLHFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTT 44 (476)
Q Consensus 8 ~~~vl~~~~p~~GHv~P~l~La~~L~~rGH~Vt~~~~ 44 (476)
+++|.|+-.+..|. .+|+.|+++||+|+++..
T Consensus 15 ~~~I~vIG~G~mG~-----~~A~~l~~~G~~V~~~dr 46 (296)
T 3qha_A 15 QLKLGYIGLGNMGA-----PMATRMTEWPGGVTVYDI 46 (296)
T ss_dssp CCCEEEECCSTTHH-----HHHHHHTTSTTCEEEECS
T ss_pred CCeEEEECcCHHHH-----HHHHHHHHCCCeEEEEeC
Confidence 56899999888885 679999999999998854
No 216
>1o97_C Electron transferring flavoprotein beta-subunit; FAD binding; HET: AMP FAD; 1.6A {Methylophilus methylotrophus} SCOP: c.26.2.3 PDB: 1o95_C* 1o96_A* 1o94_C* 3clr_C* 3cls_C* 3clt_C* 3clu_C*
Probab=28.05 E-value=66 Score=28.62 Aligned_cols=41 Identities=20% Similarity=0.167 Sum_probs=31.4
Q ss_pred HHHHHHHHhcCCCCeEEEecCCCc------hhHHHHhHcCCCcEEEecc
Q 039701 107 LPLETLFKEIQPKPGCLISDVCLP------WTVSSACKFNVPRIVFHGF 149 (476)
Q Consensus 107 ~~l~~~l~~~~~~~D~vI~D~~~~------~~~~~A~~~giP~v~~~~~ 149 (476)
..|.+++++ .+||+||+-.... -+..+|..+|+|++..++.
T Consensus 102 ~~La~~i~~--~~~dlVl~G~~s~d~~~~~v~p~lA~~L~~~~vt~v~~ 148 (264)
T 1o97_C 102 RILTEVIKK--EAPDMVFAGVQSSDQAYASTGISVASYLNWPHAAVVAD 148 (264)
T ss_dssp HHHHHHHHH--HCCSEEEEESCCTTTCCCCHHHHHHHHHTCCEEEEEEE
T ss_pred HHHHHHHHh--cCCCEEEEcCCccCCchhhHHHHHHHHhCCCcccceEE
Confidence 455666766 5899999877542 5789999999999986543
No 217
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=27.90 E-value=63 Score=29.54 Aligned_cols=32 Identities=16% Similarity=0.229 Sum_probs=27.4
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHHCCCeEEEEeC
Q 039701 8 QLHFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTT 44 (476)
Q Consensus 8 ~~~vl~~~~p~~GHv~P~l~La~~L~~rGH~Vt~~~~ 44 (476)
.++|.|+-.+..| ..+|+.|+++||+|++...
T Consensus 31 ~~~I~iIG~G~mG-----~~~a~~l~~~G~~V~~~dr 62 (320)
T 4dll_A 31 ARKITFLGTGSMG-----LPMARRLCEAGYALQVWNR 62 (320)
T ss_dssp CSEEEEECCTTTH-----HHHHHHHHHTTCEEEEECS
T ss_pred CCEEEEECccHHH-----HHHHHHHHhCCCeEEEEcC
Confidence 4699999998888 5789999999999998754
No 218
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=27.85 E-value=1.1e+02 Score=26.38 Aligned_cols=27 Identities=7% Similarity=-0.011 Sum_probs=23.6
Q ss_pred CCCeEEEecCCCchhHHHHhHcCCCcEEEe
Q 039701 118 PKPGCLISDVCLPWTVSSACKFNVPRIVFH 147 (476)
Q Consensus 118 ~~~D~vI~D~~~~~~~~~A~~~giP~v~~~ 147 (476)
.++|+||.+. .+..+|+++|+|.+.+.
T Consensus 153 ~G~~vVVG~~---~~~~~A~~~Gl~~vlI~ 179 (225)
T 2pju_A 153 NGTEAVVGAG---LITDLAEEAGMTGIFIY 179 (225)
T ss_dssp TTCCEEEESH---HHHHHHHHTTSEEEESS
T ss_pred CCCCEEECCH---HHHHHHHHcCCcEEEEC
Confidence 6999999984 45889999999999876
No 219
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=27.80 E-value=2e+02 Score=26.38 Aligned_cols=109 Identities=13% Similarity=0.149 Sum_probs=59.9
Q ss_pred eEEEecCCcccCCHHHHHHHHHHHHhC-CCCeEEEEcCCCCCchhHHHHhcCCCeEeeccccHHHhhhCCCceeeecccC
Q 039701 281 AVYVCLGSLCDCSTRQLIELGLGLEAT-KKPFIWVIRPGDQAFEKFEERIEGRGLLIRGWAPQVVILSHPAIGGFLTHCG 359 (476)
Q Consensus 281 vv~vs~GS~~~~~~~~~~~i~~a~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~nv~~~~~vpq~~ll~~~~~~~~I~HgG 359 (476)
+..|.+|.+. ...+.++.+. +..++.++..+....+.+.+.. ++. .+-...+++..+++.+++----
T Consensus 8 vgiiG~G~~g-------~~~~~~l~~~~~~~lvav~d~~~~~~~~~~~~~---g~~--~~~~~~~~l~~~~~D~V~i~tp 75 (354)
T 3db2_A 8 VAAIGLGRWA-------YVMADAYTKSEKLKLVTCYSRTEDKREKFGKRY---NCA--GDATMEALLAREDVEMVIITVP 75 (354)
T ss_dssp EEEECCSHHH-------HHHHHHHTTCSSEEEEEEECSSHHHHHHHHHHH---TCC--CCSSHHHHHHCSSCCEEEECSC
T ss_pred EEEEccCHHH-------HHHHHHHHhCCCcEEEEEECCCHHHHHHHHHHc---CCC--CcCCHHHHhcCCCCCEEEEeCC
Confidence 7788888765 2356677665 5666655544321111222211 332 2556778886555544663322
Q ss_pred ----hhhHHHHHHcCCCEec-ccccc--cchh-hHHHHHHhhcceEEeccC
Q 039701 360 ----WNSVLEAVSNGLPMVT-WPFFA--DQFC-NEKLVVQVLRIGVTIGAE 402 (476)
Q Consensus 360 ----~~s~~eal~~GvP~l~-~P~~~--DQ~~-~a~~v~e~~g~G~~l~~~ 402 (476)
..-+.+|+.+|++++| -|+.. ++-. ....+ ++.|+-..+...
T Consensus 76 ~~~h~~~~~~al~~gk~vl~EKP~~~~~~~~~~l~~~a-~~~~~~~~v~~~ 125 (354)
T 3db2_A 76 NDKHAEVIEQCARSGKHIYVEKPISVSLDHAQRIDQVI-KETGVKFLCGHS 125 (354)
T ss_dssp TTSHHHHHHHHHHTTCEEEEESSSCSSHHHHHHHHHHH-HHHCCCEEEECG
T ss_pred hHHHHHHHHHHHHcCCEEEEccCCCCCHHHHHHHHHHH-HHcCCeEEEeec
Confidence 2456788999999887 25543 3322 33334 577776666544
No 220
>3tl4_X Glutaminyl-tRNA synthetase; glutamine, appended domain, hinge, tRNA LIG amidotransferase, ligase; 2.30A {Saccharomyces cerevisiae}
Probab=27.51 E-value=46 Score=27.90 Aligned_cols=67 Identities=10% Similarity=0.092 Sum_probs=39.9
Q ss_pred hhhHHHHHHhhcceEEeccCCCCCCcccccCCcccchhHHHHHHHHHhcCChh---hHHHHHHHHHHHHHHHH----HHh
Q 039701 383 FCNEKLVVQVLRIGVTIGAERPPSLADEERNGVPVKKEDVKKAINMLMDEGEE---RDERRRRAREYGETAKT----AIE 455 (476)
Q Consensus 383 ~~~a~~v~e~~g~G~~l~~~~~~~~~~~~~~~~~~t~~~l~~~i~~ll~~~~~---~~~~r~~a~~l~~~~~~----~~~ 455 (476)
.+.+.-= +.+|||+. +|+++|.++|.++++..+. .++|+ +.-.+-...|+ -|.
T Consensus 102 id~~~Fe-~~cGVGV~------------------VT~EqI~~~V~~~i~~~k~~i~~~RY~-~~g~ll~~vr~~p~LkWA 161 (187)
T 3tl4_X 102 STKMGMN-ENSGVGIE------------------ITEDQVRNYVMQYIQENKERILTERYK-LVPGIFADVKNLKELKWA 161 (187)
T ss_dssp CCHHHHH-HTTTTTCC------------------CCHHHHHHHHHHHHHHTHHHHHHHGGG-GHHHHHHHHHTCGGGTTS
T ss_pred CCHHHHH-HHCCCCeE------------------eCHHHHHHHHHHHHHHhHHHHHHhccc-cHHHHHHHHhcccCCCCC
Confidence 3344444 68999954 6899999999999853211 23455 55555555553 134
Q ss_pred hCCChHHHHHHHHH
Q 039701 456 EGGSSYLNIKLLIK 469 (476)
Q Consensus 456 ~gg~~~~~~~~~~~ 469 (476)
+|-.....+|.-+-
T Consensus 162 d~~~vK~~vD~~~l 175 (187)
T 3tl4_X 162 DPRSFKPIIDQEVL 175 (187)
T ss_dssp CTTSHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHH
Confidence 45555555554433
No 221
>2c31_A Oxalyl-COA decarboxylase; oxalate, thiamin diphosphate, flavoprotein, lyase, thiamine pyrophosphate; HET: TZD ADP; 1.73A {Oxalobacter formigenes} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 2ji6_A* 2ji7_A* 2ji8_A* 2ji9_A* 2jib_A*
Probab=27.50 E-value=1.1e+02 Score=30.61 Aligned_cols=30 Identities=27% Similarity=0.347 Sum_probs=24.1
Q ss_pred hCCCceeeecccCh------hhHHHHHHcCCCEecccc
Q 039701 347 SHPAIGGFLTHCGW------NSVLEAVSNGLPMVTWPF 378 (476)
Q Consensus 347 ~~~~~~~~I~HgG~------~s~~eal~~GvP~l~~P~ 378 (476)
.++.+ +++|.|- +.+.||-+.++|+|++--
T Consensus 71 g~pgv--~~~TsGpG~~N~~~~i~~A~~~~vPll~itg 106 (568)
T 2c31_A 71 GKPGV--CLTVSAPGFLNGVTSLAHATTNCFPMILLSG 106 (568)
T ss_dssp SSCEE--EEECSHHHHHHHHHHHHHHHHHTCCEEEEEE
T ss_pred CCCEE--EEEcCCccHHHHHHHHHHHHhcCCCEEEEcc
Confidence 34555 9999996 577899999999999843
No 222
>1xmp_A PURE, phosphoribosylaminoimidazole carboxylase; purine biosynthesis, spine, lyase; 1.80A {Bacillus anthracis} SCOP: c.23.8.1
Probab=27.50 E-value=2.5e+02 Score=22.90 Aligned_cols=146 Identities=13% Similarity=0.039 Sum_probs=78.0
Q ss_pred CceEEEecCCcccCCHHHHHHHHHHHHhCCCCeEEEEcCCCCCchhHHHHhcCCCeEeeccccHHHhhhCCCceeeeccc
Q 039701 279 GSAVYVCLGSLCDCSTRQLIELGLGLEATKKPFIWVIRPGDQAFEKFEERIEGRGLLIRGWAPQVVILSHPAIGGFLTHC 358 (476)
Q Consensus 279 ~~vv~vs~GS~~~~~~~~~~~i~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~nv~~~~~vpq~~ll~~~~~~~~I~Hg 358 (476)
+|.|-|-+||.+ +....++....++..+.++=..+.+-...++.+.+..+ +.. -...++ +|.=+
T Consensus 11 ~~~V~IimGS~S--D~~v~~~a~~~L~~~Gi~~dv~V~SaHR~p~~l~~~~~-----------~a~-~~g~~V--iIa~A 74 (170)
T 1xmp_A 11 KSLVGVIMGSTS--DWETMKYACDILDELNIPYEKKVVSAHRTPDYMFEYAE-----------TAR-ERGLKV--IIAGA 74 (170)
T ss_dssp CCSEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECCTTTSHHHHHHHHH-----------HTT-TTTCCE--EEEEE
T ss_pred CCcEEEEECcHH--HHHHHHHHHHHHHHcCCCEEEEEEeccCCHHHHHHHHH-----------HHH-hCCCcE--EEEEC
Confidence 456777888876 45667778888888888876666554433444432110 000 001223 66655
Q ss_pred Chh----hHHHHHHcCCCEecccccccc-hhhHH--HHHHh--hcceEEeccCCCCCCcccccCCcccchhHHHHHHHHH
Q 039701 359 GWN----SVLEAVSNGLPMVTWPFFADQ-FCNEK--LVVQV--LRIGVTIGAERPPSLADEERNGVPVKKEDVKKAINML 429 (476)
Q Consensus 359 G~~----s~~eal~~GvP~l~~P~~~DQ-~~~a~--~v~e~--~g~G~~l~~~~~~~~~~~~~~~~~~t~~~l~~~i~~l 429 (476)
|.- ++.. -..-+|+|.+|..... ..... -+. + .|+.+..-.- . +.+..++.-++..|-.+
T Consensus 75 G~aa~LpgvvA-~~t~~PVIgVP~~~~~l~G~daLlSiv-qmP~GvpVatV~I-------~--~a~~~nAallAaqIla~ 143 (170)
T 1xmp_A 75 GGAAHLPGMVA-AKTNLPVIGVPVQSKALNGLDSLLSIV-QMPGGVPVATVAI-------G--KAGSTNAGLLAAQILGS 143 (170)
T ss_dssp ESSCCHHHHHH-TTCCSCEEEEEECCTTTTTHHHHHHHH-CCCTTCCCEECCS-------S--HHHHHHHHHHHHHHHHT
T ss_pred CchhhhHHHHH-hccCCCEEEeeCCCCCCCcHHHHHHHh-cCCCCCeeEEEec-------C--CcchHHHHHHHHHHHcc
Confidence 542 2222 2346899999995431 11111 222 4 3443221111 0 00135666666666543
Q ss_pred hcCChhhHHHHHHHHHHHHHHHHHHhh
Q 039701 430 MDEGEERDERRRRAREYGETAKTAIEE 456 (476)
Q Consensus 430 l~~~~~~~~~r~~a~~l~~~~~~~~~~ 456 (476)
.|+ +++++.+.++++.++.+.+
T Consensus 144 -~d~----~l~~kl~~~r~~~~~~v~~ 165 (170)
T 1xmp_A 144 -FHD----DIHDALELRREAIEKDVRE 165 (170)
T ss_dssp -TCH----HHHHHHHHHHHHHHHHHHC
T ss_pred -CCH----HHHHHHHHHHHHHHHHHHh
Confidence 555 8888888888887766443
No 223
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=27.40 E-value=46 Score=29.63 Aligned_cols=32 Identities=16% Similarity=0.046 Sum_probs=26.0
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHHCCCeEEEEeCC
Q 039701 9 LHFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTTP 45 (476)
Q Consensus 9 ~~vl~~~~p~~GHv~P~l~La~~L~~rGH~Vt~~~~~ 45 (476)
+||+|+-.|..|. .+|..|.++||+|+++...
T Consensus 1 m~i~iiG~G~~G~-----~~a~~l~~~g~~V~~~~r~ 32 (291)
T 1ks9_A 1 MKITVLGCGALGQ-----LWLTALCKQGHEVQGWLRV 32 (291)
T ss_dssp CEEEEECCSHHHH-----HHHHHHHHTTCEEEEECSS
T ss_pred CeEEEECcCHHHH-----HHHHHHHhCCCCEEEEEcC
Confidence 3688888777774 6899999999999998654
No 224
>2crj_A SWI/SNF-related matrix-associated actin- dependent regulator of chromatin subfamily...; structural DNA-binding protein BRAF35, DNA-bending; NMR {Mus musculus}
Probab=27.39 E-value=1.4e+02 Score=21.28 Aligned_cols=39 Identities=8% Similarity=0.076 Sum_probs=32.0
Q ss_pred ccchhHHHHHHHHHhc--CChhhHHHHHHHHHHHHHHHHHH
Q 039701 416 PVKKEDVKKAINMLMD--EGEERDERRRRAREYGETAKTAI 454 (476)
Q Consensus 416 ~~t~~~l~~~i~~ll~--~~~~~~~~r~~a~~l~~~~~~~~ 454 (476)
.++..+|.+.|.+.+. ++++++.|.+.|++.+++..+.+
T Consensus 32 ~~~~~eisk~lg~~Wk~ls~eeK~~Y~~~A~~~k~~y~~e~ 72 (92)
T 2crj_A 32 DLPFPEITKMLGAEWSKLQPAEKQRYLDEAEKEKQQYLKEL 72 (92)
T ss_dssp TCCHHHHHHHHHHHHHTCCTTHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 5778899999998875 46788899999999998887654
No 225
>3f67_A Putative dienelactone hydrolase; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; 1.74A {Klebsiella pneumoniae subsp}
Probab=27.32 E-value=79 Score=26.54 Aligned_cols=38 Identities=24% Similarity=0.173 Sum_probs=31.2
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHHCCCeEEEEeCC
Q 039701 8 QLHFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTTP 45 (476)
Q Consensus 8 ~~~vl~~~~p~~GHv~P~l~La~~L~~rGH~Vt~~~~~ 45 (476)
+..++++..+..|+-.-+..+++.|+++|+.|..+-..
T Consensus 31 ~~p~vv~~HG~~g~~~~~~~~~~~l~~~G~~v~~~d~~ 68 (241)
T 3f67_A 31 PLPIVIVVQEIFGVHEHIRDLCRRLAQEGYLAIAPELY 68 (241)
T ss_dssp CEEEEEEECCTTCSCHHHHHHHHHHHHTTCEEEEECTT
T ss_pred CCCEEEEEcCcCccCHHHHHHHHHHHHCCcEEEEeccc
Confidence 34577777788888888999999999999998877653
No 226
>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}
Probab=27.26 E-value=1.6e+02 Score=26.67 Aligned_cols=32 Identities=22% Similarity=0.063 Sum_probs=23.5
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHHCCCeEEEEeC
Q 039701 10 HFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTT 44 (476)
Q Consensus 10 ~vl~~~~p~~GHv~P~l~La~~L~~rGH~Vt~~~~ 44 (476)
|+++++-++. -+= ..+|+.|+++|++|+++..
T Consensus 47 k~~lVTGas~-GIG--~aia~~la~~G~~Vv~~~~ 78 (317)
T 3oec_A 47 KVAFITGAAR-GQG--RTHAVRLAQDGADIVAIDL 78 (317)
T ss_dssp CEEEESSCSS-HHH--HHHHHHHHHTTCEEEEEEC
T ss_pred CEEEEeCCCc-HHH--HHHHHHHHHCCCeEEEEec
Confidence 6788875543 232 4789999999999998753
No 227
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=27.21 E-value=64 Score=28.99 Aligned_cols=32 Identities=19% Similarity=0.170 Sum_probs=26.1
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHHCCCeEEEEeC
Q 039701 8 QLHFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTT 44 (476)
Q Consensus 8 ~~~vl~~~~p~~GHv~P~l~La~~L~~rGH~Vt~~~~ 44 (476)
+++|+|+-.+..|. .+|+.|.+.||+|+++..
T Consensus 4 ~~~i~iiG~G~~G~-----~~a~~l~~~g~~V~~~~~ 35 (301)
T 3cky_A 4 SIKIGFIGLGAMGK-----PMAINLLKEGVTVYAFDL 35 (301)
T ss_dssp CCEEEEECCCTTHH-----HHHHHHHHTTCEEEEECS
T ss_pred CCEEEEECccHHHH-----HHHHHHHHCCCeEEEEeC
Confidence 67899998888885 468889999999987653
No 228
>1ydh_A AT5G11950; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG; 2.15A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4d_A
Probab=27.15 E-value=2.9e+02 Score=23.51 Aligned_cols=44 Identities=5% Similarity=-0.049 Sum_probs=28.6
Q ss_pred eEeeccccHHH-hh-hCCCceeeecccChhhHHHHH---------HcCCCEecccc
Q 039701 334 LLIRGWAPQVV-IL-SHPAIGGFLTHCGWNSVLEAV---------SNGLPMVTWPF 378 (476)
Q Consensus 334 v~~~~~vpq~~-ll-~~~~~~~~I~HgG~~s~~eal---------~~GvP~l~~P~ 378 (476)
+.+....+... ++ ..++ ..++--||.||+-|.. .+++|++.+-.
T Consensus 89 ~~~~~~~~~Rk~~~~~~sd-a~I~lpGG~GTLdElfE~lt~~qlg~~~kPvvll~~ 143 (216)
T 1ydh_A 89 VRVVADMHERKAAMAQEAE-AFIALPGGYGTMEELLEMITWSQLGIHKKTVGLLNV 143 (216)
T ss_dssp EEEESSHHHHHHHHHHHCS-EEEECSCSHHHHHHHHHHHHHHHHTSCCCEEEEECG
T ss_pred ccccCCHHHHHHHHHHhCC-EEEEeCCCccHHHHHHHHHHHHHhcccCCCEEEecC
Confidence 44445555432 33 3334 4577889999988776 47999998864
No 229
>2pan_A Glyoxylate carboligase; thiamin-diphosphate (THDP), thimain-dependent enzymes, FAD, lyase; HET: FAD TDP 1PE; 2.70A {Escherichia coli}
Probab=27.14 E-value=2.1e+02 Score=28.80 Aligned_cols=79 Identities=13% Similarity=0.079 Sum_probs=43.7
Q ss_pred HHHHHHHHHhCCCCeEEEEcCCCCCchhHHHHh-cCCCeEeec--------cccHHHhhhC-CCceeeecccCh------
Q 039701 297 LIELGLGLEATKKPFIWVIRPGDQAFEKFEERI-EGRGLLIRG--------WAPQVVILSH-PAIGGFLTHCGW------ 360 (476)
Q Consensus 297 ~~~i~~a~~~~~~~~i~~~~~~~~~~~~~~~~~-~~~nv~~~~--------~vpq~~ll~~-~~~~~~I~HgG~------ 360 (476)
.+.+++.|++.+++.++.+.+... ..+-+.+ ..+.+.... +.-...-... ..++++++|.|-
T Consensus 30 a~~l~~~L~~~GV~~vfg~PG~~~--~~l~~al~~~~~i~~i~~~~E~~Aa~~A~GyAr~tgg~~~v~~~TsGpG~~N~~ 107 (616)
T 2pan_A 30 VDAAMYVLEKEGITTAFGVPGAAI--NPFYSAMRKHGGIRHILARHVEGASHMAEGYTRATAGNIGVCLGTSGPAGTDMI 107 (616)
T ss_dssp HHHHHHHHHHTTCCEEEECCCGGG--HHHHHHHHHHCCCEEEECSSHHHHHHHHHHHHHHSTTCCEEEEECSTHHHHTSH
T ss_pred HHHHHHHHHHCCCCEEEECCCCcc--HHHHHHHHhcCCCcEEeeCCHHHHHHHHHHHHHhcCCCceEEEeCCCchHHHHH
Confidence 344677777777777777655432 1111111 112233222 1121111112 234458889886
Q ss_pred hhHHHHHHcCCCEeccc
Q 039701 361 NSVLEAVSNGLPMVTWP 377 (476)
Q Consensus 361 ~s~~eal~~GvP~l~~P 377 (476)
+.++||-+.++|+|++-
T Consensus 108 ~~l~~A~~~~vPlvvIt 124 (616)
T 2pan_A 108 TALYSASADSIPILCIT 124 (616)
T ss_dssp HHHHHHHHTTCCEEEEE
T ss_pred HHHHHHHhcCCCEEEEe
Confidence 58899999999999984
No 230
>2lnd_A De novo designed protein, PFK fold; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=26.95 E-value=70 Score=22.23 Aligned_cols=48 Identities=15% Similarity=0.174 Sum_probs=32.4
Q ss_pred cCCCEecccccccchhhHH---HHHHhhcceEEeccCCCCCCcccccCCcccchhHHHHHHHHHhc
Q 039701 369 NGLPMVTWPFFADQFCNEK---LVVQVLRIGVTIGAERPPSLADEERNGVPVKKEDVKKAINMLMD 431 (476)
Q Consensus 369 ~GvP~l~~P~~~DQ~~~a~---~v~e~~g~G~~l~~~~~~~~~~~~~~~~~~t~~~l~~~i~~ll~ 431 (476)
+|.|.+++-..+.|.+... .. ++-|+...+-+. .++++|...+++.|.
T Consensus 50 ngkplvvfvngasqndvnefqnea-kkegvsydvlks--------------tdpeeltqrvreflk 100 (112)
T 2lnd_A 50 NGKPLVVFVNGASQNDVNEFQNEA-KKEGVSYDVLKS--------------TDPEELTQRVREFLK 100 (112)
T ss_dssp CCSCEEEEECSCCHHHHHHHHHHH-HHHTCEEEEEEC--------------CCHHHHHHHHHHHHH
T ss_pred cCCeEEEEecCcccccHHHHHHHH-HhcCcchhhhcc--------------CCHHHHHHHHHHHHH
Confidence 5778888877777755322 23 355666555454 788999999888774
No 231
>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}
Probab=26.85 E-value=73 Score=27.20 Aligned_cols=32 Identities=25% Similarity=0.204 Sum_probs=22.3
Q ss_pred EEEEcCCCccChHHHHHHHHHHHHCCCeEEEEeCC
Q 039701 11 FILFPFLAQGHMIPMIDIARLLAQHGALVTIVTTP 45 (476)
Q Consensus 11 vl~~~~p~~GHv~P~l~La~~L~~rGH~Vt~~~~~ 45 (476)
.++++ ++.|-+= ..+++.|+++||+|+++...
T Consensus 7 ~vlVt-GasggiG--~~~a~~l~~~G~~V~~~~r~ 38 (234)
T 2ehd_A 7 AVLIT-GASRGIG--EATARLLHAKGYRVGLMARD 38 (234)
T ss_dssp EEEES-STTSHHH--HHHHHHHHHTTCEEEEEESC
T ss_pred EEEEE-CCCcHHH--HHHHHHHHHCCCEEEEEECC
Confidence 45555 4444332 57899999999999988653
No 232
>1hme_A High mobility group protein fragment-B; DNA-binding; NMR {Rattus norvegicus} SCOP: a.21.1.1 PDB: 1hmf_A 1nhm_A 1nhn_A 1hsm_A 1hsn_A 1j3c_A 1j3d_A 2yqi_A
Probab=26.84 E-value=1.3e+02 Score=20.53 Aligned_cols=39 Identities=15% Similarity=0.296 Sum_probs=31.6
Q ss_pred ccchhHHHHHHHHHhc--CChhhHHHHHHHHHHHHHHHHHH
Q 039701 416 PVKKEDVKKAINMLMD--EGEERDERRRRAREYGETAKTAI 454 (476)
Q Consensus 416 ~~t~~~l~~~i~~ll~--~~~~~~~~r~~a~~l~~~~~~~~ 454 (476)
.++..+|.+.|.+.+. ++++++.|.+.|++.+++..+++
T Consensus 31 ~~~~~eisk~lg~~Wk~ls~~eK~~y~~~A~~~k~~y~~e~ 71 (77)
T 1hme_A 31 GLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDI 71 (77)
T ss_dssp TCCHHHHHHHHHHHHHHSCGGGSHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 4777889998888764 46788899999999999887664
No 233
>4e5v_A Putative THUA-like protein; THUA-like proteins, trehalose utilisation, structural genomi center for structural genomics, JCSG; 1.75A {Parabacteroides merdae}
Probab=26.75 E-value=74 Score=28.60 Aligned_cols=37 Identities=19% Similarity=0.312 Sum_probs=29.4
Q ss_pred CcEEEEEcCCCccChHHH--HHHHHHHHHCC-CeEEEEeCC
Q 039701 8 QLHFILFPFLAQGHMIPM--IDIARLLAQHG-ALVTIVTTP 45 (476)
Q Consensus 8 ~~~vl~~~~p~~GHv~P~--l~La~~L~~rG-H~Vt~~~~~ 45 (476)
++||||+ .+..+|-.+. -.|++.|.+.| .+|++...+
T Consensus 4 ~~kvLiv-~G~~~H~~~~~~~~l~~~l~~~g~f~V~~~~d~ 43 (281)
T 4e5v_A 4 PIKTLLI-TGQNNHNWQVSHVVLKQILENSGRFDVDFVISP 43 (281)
T ss_dssp CEEEEEE-ESCCSSCHHHHHHHHHHHHHHTTSEEEEEEECC
T ss_pred ceEEEEE-cCCCCCChHHHHHHHHHHHHhcCCEEEEEEeCC
Confidence 7999999 4656886554 47888888888 999999765
No 234
>1efv_B Electron transfer flavoprotein; electron transport, glutaric acidemia type II; HET: FAD AMP; 2.10A {Homo sapiens} SCOP: c.26.2.3 PDB: 1t9g_S* 2a1u_B* 2a1t_S*
Probab=26.73 E-value=73 Score=28.19 Aligned_cols=41 Identities=15% Similarity=0.000 Sum_probs=31.0
Q ss_pred HHHHHHHHhcCCCCeEEEecCCCc------hhHHHHhHcCCCcEEEecc
Q 039701 107 LPLETLFKEIQPKPGCLISDVCLP------WTVSSACKFNVPRIVFHGF 149 (476)
Q Consensus 107 ~~l~~~l~~~~~~~D~vI~D~~~~------~~~~~A~~~giP~v~~~~~ 149 (476)
..|.+++++ .+||+||+-.... -+..+|..+|+|.++.+..
T Consensus 106 ~~La~~i~~--~~~dlVl~G~~s~d~d~~~v~p~lA~~L~~~~vt~v~~ 152 (255)
T 1efv_B 106 RVLAKLAEK--EKVDLVLLGKQAIDDDCNQTGQMTAGFLDWPQGTFASQ 152 (255)
T ss_dssp HHHHHHHHH--HTCSEEEEESCCTTTCCCCHHHHHHHHHTCCEEEEEEE
T ss_pred HHHHHHHHh--cCCCEEEEeCcccCCchhhHHHHHHHHhCCCcccceEE
Confidence 455566666 5799999877542 5789999999999986543
No 235
>1rh1_A Colicin B; FEPA, cytotoxic bacterial protein, TONB, antibiotic; 2.50A {Escherichia coli} SCOP: b.110.1.1 f.1.1.1
Probab=26.68 E-value=30 Score=32.99 Aligned_cols=39 Identities=15% Similarity=0.106 Sum_probs=32.9
Q ss_pred hhhHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHhc
Q 039701 434 EERDERRRRAREYGETAKTAIEEGGSSYLNIKLLIKDILQQA 475 (476)
Q Consensus 434 ~~~~~~r~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~i~~~~ 475 (476)
.+|+.|++.|++|++.++++ .|-..+++++.++.++++.
T Consensus 339 ~~G~Kyk~lAkeIA~~lkn~---KGKkIRnvdDAL~sfeKyk 377 (511)
T 1rh1_A 339 YLGDKYKALSREIAENINNF---QGKTIRSYDDAMSSINKLM 377 (511)
T ss_dssp HHCHHHHHHHHHHHHHHHHC---TTCCCCCHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHhhc---cCceecCHHHHHHHHHHHH
Confidence 45678999999999988777 8888999999999988764
No 236
>3tla_A MCCF; serine protease, hydrolase; 1.20A {Escherichia coli} PDB: 3tle_A* 3tlg_A 3tlb_A* 3tlc_A* 3tlz_A* 3tly_A
Probab=26.67 E-value=75 Score=29.93 Aligned_cols=74 Identities=15% Similarity=0.132 Sum_probs=56.0
Q ss_pred CCHHHHHHHHHHHHhCCCCeEEEEcCCCCCchhHHHHhcCCCeEeeccccHHHhhhCCCceeeecccChhhHHHHHH--c
Q 039701 292 CSTRQLIELGLGLEATKKPFIWVIRPGDQAFEKFEERIEGRGLLIRGWAPQVVILSHPAIGGFLTHCGWNSVLEAVS--N 369 (476)
Q Consensus 292 ~~~~~~~~i~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~nv~~~~~vpq~~ll~~~~~~~~I~HgG~~s~~eal~--~ 369 (476)
.+.+....|.+++.....+.||.+.++.. -..+.+++++..+-.+|.. ||=..-...++-|++ .
T Consensus 93 td~~Ra~dL~~af~Dp~i~aI~~~rGGyg------------a~rlLp~LD~~~i~~~PK~--fiGySDiTaL~~ai~~k~ 158 (371)
T 3tla_A 93 TIKERAQEFNELVYNPDITCIMSTIGGDN------------SNSLLPFLDYDAIIANPKI--IIGYSDTTALLAGIYAKT 158 (371)
T ss_dssp CHHHHHHHHHHHHTCTTEEEEEESCCCSC------------GGGGGGGSCHHHHHHSCCE--EEECGGGHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHhhCCCCCEEEEcccccc------------HHHHHhhcChhhHHhCCcE--EEEechHHHHHHHHHHHc
Confidence 34677778999999999999999988752 2344567777777778887 888888888877776 5
Q ss_pred CCCEeccccc
Q 039701 370 GLPMVTWPFF 379 (476)
Q Consensus 370 GvP~l~~P~~ 379 (476)
|++.+-=|..
T Consensus 159 Gl~T~hGP~~ 168 (371)
T 3tla_A 159 GLITFYGPAL 168 (371)
T ss_dssp CBCEEECCCH
T ss_pred CCEEEECccc
Confidence 8887776653
No 237
>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}
Probab=26.55 E-value=2.7e+02 Score=23.72 Aligned_cols=32 Identities=34% Similarity=0.351 Sum_probs=23.3
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHHCCCeEEEEeC
Q 039701 10 HFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTT 44 (476)
Q Consensus 10 ~vl~~~~p~~GHv~P~l~La~~L~~rGH~Vt~~~~ 44 (476)
|+++++-++.| + =..+|+.|+++|++|.++..
T Consensus 8 k~vlITGas~g-I--G~~~a~~l~~~G~~v~~~~~ 39 (255)
T 3icc_A 8 KVALVTGASRG-I--GRAIAKRLANDGALVAIHYG 39 (255)
T ss_dssp CEEEETTCSSH-H--HHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCCCh-H--HHHHHHHHHHCCCeEEEEeC
Confidence 67777755543 2 25789999999999988644
No 238
>3lq1_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- 1-carboxylate synthase; menaquinone biosynthesis, sephchc synthase, structural genomics; 2.60A {Listeria monocytogenes}
Probab=26.11 E-value=1.5e+02 Score=29.64 Aligned_cols=76 Identities=14% Similarity=0.040 Sum_probs=45.4
Q ss_pred HHHHHHHHhCCCCeEEEEcCCCCCchhHHHHh-cCCCeEeecc--------cc--HHHhhhCCCceeeecccChh-----
Q 039701 298 IELGLGLEATKKPFIWVIRPGDQAFEKFEERI-EGRGLLIRGW--------AP--QVVILSHPAIGGFLTHCGWN----- 361 (476)
Q Consensus 298 ~~i~~a~~~~~~~~i~~~~~~~~~~~~~~~~~-~~~nv~~~~~--------vp--q~~ll~~~~~~~~I~HgG~~----- 361 (476)
+.|++.|++.+++.|+.+.++.. ..+-+.. +.+.+....- .- +..+-.++.+ ++++.|-|
T Consensus 15 ~~lv~~L~~~GV~~vFg~PG~~~--~~l~dal~~~~~i~~i~~~hE~~Aa~aAdGyAr~tG~pgv--~~~TsGpG~~N~~ 90 (578)
T 3lq1_A 15 AAFIEELVQAGVKEAIISPGSRS--TPLALMMAEHPILKIYVDVDERSAGFFALGLAKASKRPVV--LLCTSGTAAANYF 90 (578)
T ss_dssp HHHHHHHHHTTCCEEEECCCTTT--HHHHHHHHHCSSCEEEECSSHHHHHHHHHHHHHHHCCCEE--EEECSSHHHHTTH
T ss_pred HHHHHHHHHcCCCEEEECCCCcc--HHHHHHHHhCCCceEEEecCcHHHHHHHHHHHHhhCCCEE--EEECCchhhhhhh
Confidence 44777788888888877766542 1121111 1233433221 11 1223334455 99999965
Q ss_pred -hHHHHHHcCCCEeccc
Q 039701 362 -SVLEAVSNGLPMVTWP 377 (476)
Q Consensus 362 -s~~eal~~GvP~l~~P 377 (476)
.++||-+.++|+|++-
T Consensus 91 ~gia~A~~d~vPll~it 107 (578)
T 3lq1_A 91 PAVAEANLSQIPLIVLT 107 (578)
T ss_dssp HHHHHHHHTTCCEEEEE
T ss_pred HHHHHHHhcCCCeEEEe
Confidence 7889999999999985
No 239
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=25.92 E-value=1.5e+02 Score=25.86 Aligned_cols=33 Identities=21% Similarity=0.166 Sum_probs=23.3
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHHCCCeEEEEeCC
Q 039701 10 HFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTTP 45 (476)
Q Consensus 10 ~vl~~~~p~~GHv~P~l~La~~L~~rGH~Vt~~~~~ 45 (476)
++++++-++ |-+= ..+|++|+++|++|.++.-.
T Consensus 30 k~vlITGas-~gIG--~~la~~l~~~G~~V~~~~r~ 62 (262)
T 3rkr_A 30 QVAVVTGAS-RGIG--AAIARKLGSLGARVVLTARD 62 (262)
T ss_dssp CEEEESSTT-SHHH--HHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCC-ChHH--HHHHHHHHHCCCEEEEEECC
Confidence 577777444 3332 57789999999999887643
No 240
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=25.88 E-value=1e+02 Score=28.72 Aligned_cols=35 Identities=14% Similarity=0.042 Sum_probs=24.3
Q ss_pred eEEEecCCcccCCHHHHHHHHHHHHhCCCCeEEEEcC
Q 039701 281 AVYVCLGSLCDCSTRQLIELGLGLEATKKPFIWVIRP 317 (476)
Q Consensus 281 vv~vs~GS~~~~~~~~~~~i~~a~~~~~~~~i~~~~~ 317 (476)
+++++.|+.+. ...+..++++|.+.|.+|.+....
T Consensus 18 Il~~~~~~~gh--~~~~~~La~~L~~~GheV~v~~~~ 52 (398)
T 4fzr_A 18 ILVIAGCSEGF--VMPLVPLSWALRAAGHEVLVAASE 52 (398)
T ss_dssp EEEECCSSHHH--HGGGHHHHHHHHHTTCEEEEEEEG
T ss_pred EEEEcCCCcch--HHHHHHHHHHHHHCCCEEEEEcCH
Confidence 67777775332 223456899999999999887753
No 241
>3bbn_B Ribosomal protein S2; small ribosomal subunit, spinach chloroplast ribosome, ribonucleoprotein particle, macromolecular complex; 9.40A {Spinacea oleracea} SCOP: i.1.1.1
Probab=25.71 E-value=3.2e+02 Score=23.56 Aligned_cols=32 Identities=16% Similarity=0.165 Sum_probs=24.0
Q ss_pred CCCeEEE-ecCCC-chhHHHHhHcCCCcEEEecc
Q 039701 118 PKPGCLI-SDVCL-PWTVSSACKFNVPRIVFHGF 149 (476)
Q Consensus 118 ~~~D~vI-~D~~~-~~~~~~A~~~giP~v~~~~~ 149 (476)
..||+|| .|+.. .-+..=|.++|||.|.++-+
T Consensus 156 ~~Pdll~v~Dp~~e~~ai~EA~~l~IPvIaivDT 189 (231)
T 3bbn_B 156 GLPDIVIIVDQQEEYTALRECITLGIPTICLIDT 189 (231)
T ss_dssp SCCSEEEESCTTTTHHHHHHHHTTTCCEEECCCS
T ss_pred cCCCEEEEeCCccccHHHHHHHHhCCCEEEEecC
Confidence 4699766 67644 46788899999999996544
No 242
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=25.60 E-value=35 Score=26.43 Aligned_cols=32 Identities=22% Similarity=0.180 Sum_probs=23.7
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHHCCCeEEEEeCC
Q 039701 9 LHFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTTP 45 (476)
Q Consensus 9 ~~vl~~~~p~~GHv~P~l~La~~L~~rGH~Vt~~~~~ 45 (476)
.||+++-.+..| ..+++.|.++|++|+++...
T Consensus 7 ~~v~I~G~G~iG-----~~~a~~l~~~g~~v~~~d~~ 38 (144)
T 2hmt_A 7 KQFAVIGLGRFG-----GSIVKELHRMGHEVLAVDIN 38 (144)
T ss_dssp CSEEEECCSHHH-----HHHHHHHHHTTCCCEEEESC
T ss_pred CcEEEECCCHHH-----HHHHHHHHHCCCEEEEEeCC
Confidence 368888654444 46789999999999988653
No 243
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=25.56 E-value=1.6e+02 Score=26.40 Aligned_cols=33 Identities=15% Similarity=0.071 Sum_probs=23.2
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHHCCCeEEEEeCC
Q 039701 10 HFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTTP 45 (476)
Q Consensus 10 ~vl~~~~p~~GHv~P~l~La~~L~~rGH~Vt~~~~~ 45 (476)
|+++++-++ |-+= ..+|+.|+++|++|.++.-.
T Consensus 32 k~vlVTGas-~gIG--~~la~~l~~~G~~V~~~~r~ 64 (301)
T 3tjr_A 32 RAAVVTGGA-SGIG--LATATEFARRGARLVLSDVD 64 (301)
T ss_dssp CEEEEETTT-SHHH--HHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEeCCC-CHHH--HHHHHHHHHCCCEEEEEECC
Confidence 566666443 4332 47899999999999887643
No 244
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=25.51 E-value=2e+02 Score=25.30 Aligned_cols=32 Identities=25% Similarity=0.178 Sum_probs=23.4
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHHCCCeEEEEeC
Q 039701 10 HFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTT 44 (476)
Q Consensus 10 ~vl~~~~p~~GHv~P~l~La~~L~~rGH~Vt~~~~ 44 (476)
|+++++-++.| + =..+|+.|+++|++|+++.-
T Consensus 11 k~vlVTGas~g-I--G~~ia~~l~~~G~~V~~~~~ 42 (287)
T 3pxx_A 11 KVVLVTGGARG-Q--GRSHAVKLAEEGADIILFDI 42 (287)
T ss_dssp CEEEEETTTSH-H--HHHHHHHHHHTTCEEEEEEC
T ss_pred CEEEEeCCCCh-H--HHHHHHHHHHCCCeEEEEcc
Confidence 67777755432 2 24789999999999998754
No 245
>2hy5_B Intracellular sulfur oxidation protein DSRF; DSRE, DSRF, sulfur, structural genomics, PSI, protein initiative, berkeley structural genomics center, BSGC, TRAN; 1.72A {Allochromatium vinosum} SCOP: c.114.1.1 PDB: 2hyb_B
Probab=25.42 E-value=69 Score=25.14 Aligned_cols=33 Identities=9% Similarity=0.016 Sum_probs=23.2
Q ss_pred EcCCCccChHH--HHHHHHHHHHCCCeEEEEeCCc
Q 039701 14 FPFLAQGHMIP--MIDIARLLAQHGALVTIVTTPM 46 (476)
Q Consensus 14 ~~~p~~GHv~P--~l~La~~L~~rGH~Vt~~~~~~ 46 (476)
+..+-+|+... .+.+|..+...||+|.++-..+
T Consensus 12 v~~~P~g~~~~~~al~~a~a~~a~~~~v~Vff~~D 46 (136)
T 2hy5_B 12 NRKAPYGTIYAWEALEVVLIGAAFDQDVCVLFLDD 46 (136)
T ss_dssp ECSCTTTSSHHHHHHHHHHHHGGGCCEEEEEECGG
T ss_pred EeCCCCCcHHHHHHHHHHHHHHhCCCCEEEEEEhH
Confidence 34445565444 5777999899999999887654
No 246
>4eg0_A D-alanine--D-alanine ligase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.65A {Burkholderia ambifaria} PDB: 4egq_A 4egj_A
Probab=25.39 E-value=1e+02 Score=27.93 Aligned_cols=38 Identities=5% Similarity=-0.180 Sum_probs=28.9
Q ss_pred CcEEEEEcCCCccC----hHHHHHHHHHHHHCCCeEEEEeCC
Q 039701 8 QLHFILFPFLAQGH----MIPMIDIARLLAQHGALVTIVTTP 45 (476)
Q Consensus 8 ~~~vl~~~~p~~GH----v~P~l~La~~L~~rGH~Vt~~~~~ 45 (476)
++||+++.-+..+- +.-...++++|.++||+|..+.+.
T Consensus 13 ~~~v~vl~gg~s~E~~vsl~s~~~v~~al~~~g~~v~~i~~~ 54 (317)
T 4eg0_A 13 FGKVAVLFGGESAEREVSLTSGRLVLQGLRDAGIDAHPFDPA 54 (317)
T ss_dssp GCEEEEECCCSSTTHHHHHHHHHHHHHHHHHTTCEEEEECTT
T ss_pred cceEEEEECCCCCcceeeHHHHHHHHHHHHHCCCEEEEEeCC
Confidence 57899988553322 345678999999999999999854
No 247
>2lse_A Four helix bundle protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=31.10 E-value=15 Score=25.09 Aligned_cols=37 Identities=24% Similarity=0.313 Sum_probs=20.8
Q ss_pred HHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHhc
Q 039701 438 ERRRRAREYGETAKTAIEEGGSSYLNIKLLIKDILQQA 475 (476)
Q Consensus 438 ~~r~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~i~~~~ 475 (476)
+.|++..+++...+.++++| .+.+-++.|-+..++|+
T Consensus 26 earerieklakdvkdeleeg-daknmiekfrdemeqmy 62 (101)
T 2lse_A 26 EARERIEKLAKDVKDELEEG-DAKNMIEKFRDEMEQMY 62 (101)
Confidence 55666666666666555443 33455555555555554
No 248
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=25.20 E-value=1.9e+02 Score=25.29 Aligned_cols=32 Identities=19% Similarity=0.079 Sum_probs=23.1
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHHCCCeEEEEeC
Q 039701 10 HFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTT 44 (476)
Q Consensus 10 ~vl~~~~p~~GHv~P~l~La~~L~~rGH~Vt~~~~ 44 (476)
|+++++-++ |-+= ..+|++|+++|++|.+...
T Consensus 19 k~~lVTGas-~gIG--~aia~~l~~~G~~V~~~~~ 50 (270)
T 3is3_A 19 KVALVTGSG-RGIG--AAVAVHLGRLGAKVVVNYA 50 (270)
T ss_dssp CEEEESCTT-SHHH--HHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCC-chHH--HHHHHHHHHCCCEEEEEcC
Confidence 677777444 3332 4789999999999998654
No 249
>3hww_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- carboxylate synthase; menaquinone, THDP, Mg, vitamin K2, carboxylase, magnesium; HET: AKG; 1.95A {Escherichia coli k-12} PDB: 3flm_A* 3hwx_A* 2jlc_A* 2jla_A*
Probab=25.11 E-value=1.8e+02 Score=28.96 Aligned_cols=76 Identities=11% Similarity=0.096 Sum_probs=43.1
Q ss_pred HHHHHHHHhCCCCeEEEEcCCCCCchhHHHHh-cCCCeEeec--------ccc--HHHhhhCCCceeeecccChh-----
Q 039701 298 IELGLGLEATKKPFIWVIRPGDQAFEKFEERI-EGRGLLIRG--------WAP--QVVILSHPAIGGFLTHCGWN----- 361 (476)
Q Consensus 298 ~~i~~a~~~~~~~~i~~~~~~~~~~~~~~~~~-~~~nv~~~~--------~vp--q~~ll~~~~~~~~I~HgG~~----- 361 (476)
+.|++.|++.+++.|+.+.++.. ..+-+.. ..+++.... |.- +..+-.++.+ +++|.|-|
T Consensus 12 ~~lv~~L~~~GV~~vFg~PG~~~--~~l~dal~~~~~i~~i~~~hE~~Aa~~AdGyAr~tG~pgv--~~~TsGpG~~N~~ 87 (556)
T 3hww_A 12 AVILEALTRHGVRHICIAPGSRS--TLLTLAAAENSAFIHHTHFDERGLGHLALGLAKVSKQPVA--VIVTSGTAVANLY 87 (556)
T ss_dssp HHHHHHHHTTTCCEEEECCCTTS--HHHHHHHHHCTTCEEEECSCHHHHHHHHHHHHHHHCSCEE--EEECSSHHHHTTH
T ss_pred HHHHHHHHHCCCCEEEEcCCCCc--HHHHHHHhhCCCceEEEecCCcHHHHHHHHHHHhhCCCEE--EEECCCcHHHhhh
Confidence 34667777777777766655542 1111111 122333222 111 1122234445 99999965
Q ss_pred -hHHHHHHcCCCEeccc
Q 039701 362 -SVLEAVSNGLPMVTWP 377 (476)
Q Consensus 362 -s~~eal~~GvP~l~~P 377 (476)
.++||-+.++|+|++-
T Consensus 88 ~gia~A~~d~vPll~it 104 (556)
T 3hww_A 88 PALIEAGLTGEKLILLT 104 (556)
T ss_dssp HHHHHHHHHCCCEEEEE
T ss_pred HHHHHHHHhCCCeEEEe
Confidence 7889999999999984
No 250
>1efp_B ETF, protein (electron transfer flavoprotein); electron transport, glutaric acidemia type II; HET: FAD AMP; 2.60A {Paracoccus denitrificans} SCOP: c.26.2.3
Probab=24.96 E-value=72 Score=28.16 Aligned_cols=41 Identities=10% Similarity=-0.048 Sum_probs=30.7
Q ss_pred HHHHHHHHhcCCCCeEEEecCCCc------hhHHHHhHcCCCcEEEecc
Q 039701 107 LPLETLFKEIQPKPGCLISDVCLP------WTVSSACKFNVPRIVFHGF 149 (476)
Q Consensus 107 ~~l~~~l~~~~~~~D~vI~D~~~~------~~~~~A~~~giP~v~~~~~ 149 (476)
..|.+++++ .+||+||+-.... -+..+|..+|+|.++.++.
T Consensus 103 ~~La~~i~~--~~~dlVl~G~~s~d~~~~~v~p~lA~~L~~~~vt~v~~ 149 (252)
T 1efp_B 103 KILAAVARA--EGTELIIAGKQAIDNDMNATGQMLAAILGWAQATFASK 149 (252)
T ss_dssp HHHHHHHHH--HTCSEEEEESCCTTTCCCCHHHHHHHHHTCEEEEEEEE
T ss_pred HHHHHHHHh--cCCCEEEEcCCccCCchhhHHHHHHHHhCCCccccEEE
Confidence 345556666 5799999877542 5789999999999986543
No 251
>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1
Probab=24.77 E-value=1.6e+02 Score=30.00 Aligned_cols=39 Identities=10% Similarity=-0.085 Sum_probs=27.4
Q ss_pred HHHHHHhcCCCCeEEEecCCC-chhHHHHhHcCCCcEEEecc
Q 039701 109 LETLFKEIQPKPGCLISDVCL-PWTVSSACKFNVPRIVFHGF 149 (476)
Q Consensus 109 l~~~l~~~~~~~D~vI~D~~~-~~~~~~A~~~giP~v~~~~~ 149 (476)
+.+.+++ .+||+||+-.+. .-...+-......++-++++
T Consensus 67 ~~~~l~~--~~~d~iv~~~~~~il~~~~l~~~~~~~iNiH~s 106 (660)
T 1z7e_A 67 WVERIAQ--LSPDVIFSFYYRHLIYDEILQLAPAGAFNLHGS 106 (660)
T ss_dssp HHHHHHH--HCCSEEEEESCCSCCCHHHHTTCTTCEEEEESS
T ss_pred HHHHHHh--cCCCEEEEcCcccccCHHHHhcCCCCeEEecCC
Confidence 3455666 699999976654 45566667777778888776
No 252
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=24.74 E-value=61 Score=27.47 Aligned_cols=33 Identities=18% Similarity=0.148 Sum_probs=26.3
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHHCCCeEEEEeCC
Q 039701 8 QLHFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTTP 45 (476)
Q Consensus 8 ~~~vl~~~~p~~GHv~P~l~La~~L~~rGH~Vt~~~~~ 45 (476)
.++|.|+-.+..| ..+|..|+++||+|+++...
T Consensus 19 ~~~I~iiG~G~mG-----~~la~~l~~~g~~V~~~~~~ 51 (209)
T 2raf_A 19 GMEITIFGKGNMG-----QAIGHNFEIAGHEVTYYGSK 51 (209)
T ss_dssp -CEEEEECCSHHH-----HHHHHHHHHTTCEEEEECTT
T ss_pred CCEEEEECCCHHH-----HHHHHHHHHCCCEEEEEcCC
Confidence 4689999877777 56789999999999988643
No 253
>1iow_A DD-ligase, DDLB, D-ALA\:D-Ala ligase; glycogen phosphorylase, cell WALL, peptidoglycan synthesis, vancomycin, ADP binding; HET: ADP PHY; 1.90A {Escherichia coli} SCOP: c.30.1.2 d.142.1.1 PDB: 1iov_A* 2dln_A* 3v4z_A*
Probab=24.68 E-value=1e+02 Score=27.53 Aligned_cols=38 Identities=8% Similarity=-0.110 Sum_probs=27.2
Q ss_pred CcEEEEEcCCCc-cChH---HHHHHHHHHHHCCCeEEEEeCC
Q 039701 8 QLHFILFPFLAQ-GHMI---PMIDIARLLAQHGALVTIVTTP 45 (476)
Q Consensus 8 ~~~vl~~~~p~~-GHv~---P~l~La~~L~~rGH~Vt~~~~~ 45 (476)
+++|+++.-+.. -|-. -...++++|.++||+|.++...
T Consensus 2 ~~~i~il~gg~s~e~~~s~~~~~~l~~al~~~G~~v~~~~~~ 43 (306)
T 1iow_A 2 TDKIAVLLGGTSAEREVSLNSGAAVLAGLREGGIDAYPVDPK 43 (306)
T ss_dssp CCEEEEECCCSSTTHHHHHHHHHHHHHHHHHTTCEEEEECTT
T ss_pred CcEEEEEeCCCCccceEcHHhHHHHHHHHHHCCCeEEEEecC
Confidence 468998875432 2222 3457999999999999988765
No 254
>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*
Probab=24.65 E-value=81 Score=27.17 Aligned_cols=40 Identities=13% Similarity=0.080 Sum_probs=22.9
Q ss_pred CCCCCCCCcEEEEEcCCCccChHHHHHHHHHHHHCCCeEEEEeCC
Q 039701 1 MASQAGSQLHFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTTP 45 (476)
Q Consensus 1 m~~~~~~~~~vl~~~~p~~GHv~P~l~La~~L~~rGH~Vt~~~~~ 45 (476)
|+.+.+ . ++++++ ++.|-+= ..+|+.|+++|++|+++.-.
T Consensus 1 M~~~~~-~-k~vlVT-Gas~gIG--~~ia~~l~~~G~~V~~~~r~ 40 (241)
T 1dhr_A 1 MAASGE-A-RRVLVY-GGRGALG--SRCVQAFRARNWWVASIDVV 40 (241)
T ss_dssp -----C-C-CEEEEE-TTTSHHH--HHHHHHHHTTTCEEEEEESS
T ss_pred CCccCC-C-CEEEEE-CCCcHHH--HHHHHHHHhCCCEEEEEeCC
Confidence 555533 3 345555 4444332 47899999999999987643
No 255
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=24.42 E-value=63 Score=28.89 Aligned_cols=31 Identities=10% Similarity=0.101 Sum_probs=25.1
Q ss_pred cEEEEEcC-CCccChHHHHHHHHHHHHCCCeEEEEeC
Q 039701 9 LHFILFPF-LAQGHMIPMIDIARLLAQHGALVTIVTT 44 (476)
Q Consensus 9 ~~vl~~~~-p~~GHv~P~l~La~~L~~rGH~Vt~~~~ 44 (476)
++|+|+-. |..| ..+|+.|.++||+|+++..
T Consensus 12 m~I~iIG~tG~mG-----~~la~~l~~~g~~V~~~~r 43 (286)
T 3c24_A 12 KTVAILGAGGKMG-----ARITRKIHDSAHHLAAIEI 43 (286)
T ss_dssp CEEEEETTTSHHH-----HHHHHHHHHSSSEEEEECC
T ss_pred CEEEEECCCCHHH-----HHHHHHHHhCCCEEEEEEC
Confidence 48999987 7777 4578899999999997654
No 256
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=24.32 E-value=1.6e+02 Score=25.72 Aligned_cols=32 Identities=9% Similarity=-0.028 Sum_probs=23.7
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHHCCCeEEEEeC
Q 039701 10 HFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTT 44 (476)
Q Consensus 10 ~vl~~~~p~~GHv~P~l~La~~L~~rGH~Vt~~~~ 44 (476)
|+++++-++.| += ..+|+.|+++|++|.++..
T Consensus 12 k~vlVTGas~G-IG--~aia~~la~~G~~V~~~~r 43 (262)
T 3ksu_A 12 KVIVIAGGIKN-LG--ALTAKTFALESVNLVLHYH 43 (262)
T ss_dssp CEEEEETCSSH-HH--HHHHHHHTTSSCEEEEEES
T ss_pred CEEEEECCCch-HH--HHHHHHHHHCCCEEEEEec
Confidence 67777755543 32 5789999999999998754
No 257
>3qrx_B Melittin; calcium-binding, EF-hand, cell division, calcium binding, ME binding protein-toxin complex; 2.20A {Chlamydomonas reinhardtii} PDB: 1bh1_A 2mlt_A
Probab=24.31 E-value=22 Score=18.50 Aligned_cols=18 Identities=33% Similarity=0.634 Sum_probs=14.6
Q ss_pred ChhhHHHHHHcCCCEecc
Q 039701 359 GWNSVLEAVSNGLPMVTW 376 (476)
Q Consensus 359 G~~s~~eal~~GvP~l~~ 376 (476)
|.|++.-.|+.|.|.++-
T Consensus 1 giGa~LKVLa~~LP~liS 18 (26)
T 3qrx_B 1 GIGAVLKVLTTGLPALIS 18 (26)
T ss_pred CchHHHHHHHccchHHHH
Confidence 678888889999997763
No 258
>3uhj_A Probable glycerol dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.34A {Sinorhizobium meliloti}
Probab=24.14 E-value=92 Score=29.49 Aligned_cols=89 Identities=13% Similarity=0.106 Sum_probs=42.1
Q ss_pred ccccccCCCCCceEEEecCCcccCCHHHHHHHHHHHHhCCCCeEEEEcCCCCCchhHHHHhcCCCeEeeccccHHHhhh-
Q 039701 269 CLKWLDSWQPGSAVYVCLGSLCDCSTRQLIELGLGLEATKKPFIWVIRPGDQAFEKFEERIEGRGLLIRGWAPQVVILS- 347 (476)
Q Consensus 269 l~~~l~~~~~~~vv~vs~GS~~~~~~~~~~~i~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~nv~~~~~vpq~~ll~- 347 (476)
+.+++.... +.++.|+-.+.. ....+.+.+.+++ +..+++..-..+...+.+.+ -.+.+.
T Consensus 44 l~~~l~~~g-~r~liVtd~~~~---~~~~~~v~~~L~~-g~~~~~~~~~~~p~~~~v~~--------------~~~~~~~ 104 (387)
T 3uhj_A 44 LAAYLAPLG-KRALVLIDRVLF---DALSERIGKSCGD-SLDIRFERFGGECCTSEIER--------------VRKVAIE 104 (387)
T ss_dssp THHHHGGGC-SEEEEEECTTTH---HHHHHHC-------CCEEEEEECCSSCSHHHHHH--------------HHHHHHH
T ss_pred HHHHHHHcC-CEEEEEECchHH---HHHHHHHHHHHHc-CCCeEEEEcCCCCCHHHHHH--------------HHHHHhh
Confidence 344444433 335556544332 2245567788888 77764433222211111111 011222
Q ss_pred -CCCceeeecccChhhHHH-----HHHcCCCEeccccc
Q 039701 348 -HPAIGGFLTHCGWNSVLE-----AVSNGLPMVTWPFF 379 (476)
Q Consensus 348 -~~~~~~~I~HgG~~s~~e-----al~~GvP~l~~P~~ 379 (476)
.+++ +|-=|| ||+.. |...|+|.+++|..
T Consensus 105 ~~~d~--IIavGG-Gs~~D~AK~iA~~~~~p~i~IPTT 139 (387)
T 3uhj_A 105 HGSDI--LVGVGG-GKTADTAKIVAIDTGARIVIAPTI 139 (387)
T ss_dssp HTCSE--EEEESS-HHHHHHHHHHHHHTTCEEEECCSS
T ss_pred cCCCE--EEEeCC-cHHHHHHHHHHHhcCCCEEEecCc
Confidence 3555 999888 44443 35679999999996
No 259
>2fb6_A Conserved hypothetical protein; structural genomics, PSI, protein STRU initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.46A {Bacteroides thetaiotaomicron}
Probab=24.10 E-value=83 Score=23.92 Aligned_cols=38 Identities=8% Similarity=-0.069 Sum_probs=26.7
Q ss_pred CcEEEEEcCCCccCh--HHHHHHHHHHHHCC--CeEEEEeCC
Q 039701 8 QLHFILFPFLAQGHM--IPMIDIARLLAQHG--ALVTIVTTP 45 (476)
Q Consensus 8 ~~~vl~~~~p~~GHv--~P~l~La~~L~~rG--H~Vt~~~~~ 45 (476)
..|++|+-+-..-.. +-.+.+|....++| |+|.++...
T Consensus 7 ~~K~~ivi~s~d~~~~~~~al~~A~~a~~~G~~~eV~i~~~G 48 (117)
T 2fb6_A 7 NDKLTILWTTDNKDTVFNMLAMYALNSKNRGWWKHINIILWG 48 (117)
T ss_dssp TSEEEEEECCCCHHHHHHTHHHHHHHHHHHTSCSEEEEEECS
T ss_pred CCeEEEEEEcCChHHHHHHHHHHHHHHHHcCCCCcEEEEEEC
Confidence 456777665533222 34678899999999 899998765
No 260
>3trh_A Phosphoribosylaminoimidazole carboxylase carboxyltransferase subunit; purines, pyrimidines, nucleosides, nucleotides, lyase; 2.20A {Coxiella burnetii}
Probab=24.04 E-value=2.9e+02 Score=22.49 Aligned_cols=143 Identities=12% Similarity=0.083 Sum_probs=74.8
Q ss_pred ceEEEecCCcccCCHHHHHHHHHHHHhCCCCeEEEEcCCCCCchhHHHHhcCCCeEeeccccHHHhhhCCCceeeecccC
Q 039701 280 SAVYVCLGSLCDCSTRQLIELGLGLEATKKPFIWVIRPGDQAFEKFEERIEGRGLLIRGWAPQVVILSHPAIGGFLTHCG 359 (476)
Q Consensus 280 ~vv~vs~GS~~~~~~~~~~~i~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~nv~~~~~vpq~~ll~~~~~~~~I~HgG 359 (476)
+.|-|-+||.+ +....++....++..+.++-+.+.+-...++.+.+.. ... ..-.++++|.=+|
T Consensus 7 ~~V~IimgS~S--D~~v~~~a~~~l~~~gi~~ev~V~SaHR~p~~~~~~~-----------~~a---~~~g~~ViIa~AG 70 (169)
T 3trh_A 7 IFVAILMGSDS--DLSTMETAFTELKSLGIPFEAHILSAHRTPKETVEFV-----------ENA---DNRGCAVFIAAAG 70 (169)
T ss_dssp CEEEEEESCGG--GHHHHHHHHHHHHHTTCCEEEEECCTTTSHHHHHHHH-----------HHH---HHTTEEEEEEEEC
T ss_pred CcEEEEECcHH--hHHHHHHHHHHHHHcCCCEEEEEEcccCCHHHHHHHH-----------HHH---HhCCCcEEEEECC
Confidence 35667778765 4566777888888888887666655544344443311 000 0011222776666
Q ss_pred hh----hHHHHHHcCCCEecccccc-cchhhHHHHH-Hh--hcceEE-eccCCCCCCcccccCCcccchhHHHHHHHHHh
Q 039701 360 WN----SVLEAVSNGLPMVTWPFFA-DQFCNEKLVV-QV--LRIGVT-IGAERPPSLADEERNGVPVKKEDVKKAINMLM 430 (476)
Q Consensus 360 ~~----s~~eal~~GvP~l~~P~~~-DQ~~~a~~v~-e~--~g~G~~-l~~~~~~~~~~~~~~~~~~t~~~l~~~i~~ll 430 (476)
.. ++. |-..-+|+|.+|... +-......++ -+ -|+.+. +...+ .+.+++.-++..|-.+
T Consensus 71 ~aa~Lpgvv-A~~t~~PVIgVP~~~~~l~G~dsLlS~vqmp~GvPVatV~I~~----------a~~~nAa~lAa~Il~~- 138 (169)
T 3trh_A 71 LAAHLAGTI-AAHTLKPVIGVPMAGGSLGGLDALLSTVQMPGGVPVACTAIGK----------AGAKNAAILAAQIIAL- 138 (169)
T ss_dssp SSCCHHHHH-HHTCSSCEEEEECCCSTTTTHHHHHHHHCCCTTSCCEECCSTH----------HHHHHHHHHHHHHHHT-
T ss_pred hhhhhHHHH-HhcCCCCEEEeecCCCCCCCHHHHHHhhcCCCCCceEEEecCC----------ccchHHHHHHHHHHcC-
Confidence 42 222 233468999999853 2222232232 02 343211 11110 0134555566555444
Q ss_pred cCChhhHHHHHHHHHHHHHHHHHH
Q 039701 431 DEGEERDERRRRAREYGETAKTAI 454 (476)
Q Consensus 431 ~~~~~~~~~r~~a~~l~~~~~~~~ 454 (476)
.|+ +++++.+..+++.++.+
T Consensus 139 ~d~----~l~~kl~~~r~~~~~~v 158 (169)
T 3trh_A 139 QDK----SIAQKLVQQRTAKRETL 158 (169)
T ss_dssp TCH----HHHHHHHHHHHHHHHHH
T ss_pred CCH----HHHHHHHHHHHHHHHHH
Confidence 455 78888888877777553
No 261
>2gez_A L-asparaginase alpha subunit; isoaspartyl aminopeptidase, NTN-hydrolase, autoproteolysis, taspase, sodium binding, hydrolase; 2.60A {Lupinus luteus}
Probab=24.01 E-value=1.5e+02 Score=24.87 Aligned_cols=35 Identities=11% Similarity=0.207 Sum_probs=22.5
Q ss_pred HHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHH
Q 039701 439 RRRRAREYGETAKTAIEEGGSSYLNIKLLIKDILQ 473 (476)
Q Consensus 439 ~r~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~i~~ 473 (476)
|++..++.-+.-.+.+..||++.++++..++.+|.
T Consensus 30 ~~~~l~~a~~~g~~~L~~G~sAlDAV~~av~~lEd 64 (195)
T 2gez_A 30 REEGLRHCLQIGVEALKAQKPPLDVVELVVRELEN 64 (195)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhc
Confidence 33333333333333445599999999999998874
No 262
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=23.82 E-value=67 Score=29.16 Aligned_cols=30 Identities=17% Similarity=0.241 Sum_probs=26.6
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHHCCCeEEEEeC
Q 039701 10 HFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTT 44 (476)
Q Consensus 10 ~vl~~~~p~~GHv~P~l~La~~L~~rGH~Vt~~~~ 44 (476)
||.|+-.+.+|. ++|+.|.++||+|++..-
T Consensus 5 kIgfIGlG~MG~-----~mA~~L~~~G~~v~v~dr 34 (300)
T 3obb_A 5 QIAFIGLGHMGA-----PMATNLLKAGYLLNVFDL 34 (300)
T ss_dssp EEEEECCSTTHH-----HHHHHHHHTTCEEEEECS
T ss_pred EEEEeeehHHHH-----HHHHHHHhCCCeEEEEcC
Confidence 799999999995 689999999999998753
No 263
>2wvg_A PDC, pyruvate decarboxylase; thiamine diphosphate, lyase, flavoprotein, metal-binding, alcohol fermentation; HET: TPU; 1.75A {Zymomonas mobilis} PDB: 2wva_A* 2wvh_A 3oe1_A* 1zpd_A*
Probab=23.75 E-value=1.8e+02 Score=28.99 Aligned_cols=28 Identities=11% Similarity=0.121 Sum_probs=22.6
Q ss_pred ceeeecccCh------hhHHHHHHcCCCEecccc
Q 039701 351 IGGFLTHCGW------NSVLEAVSNGLPMVTWPF 378 (476)
Q Consensus 351 ~~~~I~HgG~------~s~~eal~~GvP~l~~P~ 378 (476)
.+++++|.|- +.++||-+.++|+|++--
T Consensus 66 ~~v~~~TsGpG~~N~~~gia~A~~~~vPll~itg 99 (568)
T 2wvg_A 66 AAAAVVTYSVGALSAFDAIGGAYAENLPVILISG 99 (568)
T ss_dssp CEEEEECTTTTHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred CeEEEEeCCCCHHHHHHHHHHHhhhCCCEEEEeC
Confidence 3448888886 588899999999999843
No 264
>1ckt_A High mobility group 1 protein; high-mobility group domain, BENT DNA, protein-drug-DNA compl regulation-DNA complex; HET: DNA 5IU; 2.50A {Rattus norvegicus} SCOP: a.21.1.1 PDB: 1j3x_A
Probab=23.69 E-value=1.6e+02 Score=19.61 Aligned_cols=36 Identities=8% Similarity=0.046 Sum_probs=29.2
Q ss_pred hhHHHHHHHHHhc--CChhhHHHHHHHHHHHHHHHHHH
Q 039701 419 KEDVKKAINMLMD--EGEERDERRRRAREYGETAKTAI 454 (476)
Q Consensus 419 ~~~l~~~i~~ll~--~~~~~~~~r~~a~~l~~~~~~~~ 454 (476)
-.+|.+.|.+.+. ++++++.|.+.|++.+++..+++
T Consensus 31 ~~eisk~lg~~Wk~ls~~eK~~y~~~A~~~k~~y~~e~ 68 (71)
T 1ckt_A 31 FSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREM 68 (71)
T ss_dssp HHHHHHHHHHHHHTCCTTTSHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 3788888888764 46778899999999999887664
No 265
>4feg_A Pyruvate oxidase; carbanion, structure activity relationship, oxidation-reduct umpolung, thiamine diphosphate, reaction intermediate; HET: TDM FAD GOL; 1.09A {Lactobacillus plantarum} PDB: 4fee_A* 1y9d_A* 2ez9_A* 2ez4_A* 2ez8_A* 2ezt_A* 2ezu_A* 1pow_A* 1pox_A*
Probab=23.56 E-value=2.4e+02 Score=28.30 Aligned_cols=29 Identities=10% Similarity=0.241 Sum_probs=23.5
Q ss_pred hCCCceeeecccChh------hHHHHHHcCCCEeccc
Q 039701 347 SHPAIGGFLTHCGWN------SVLEAVSNGLPMVTWP 377 (476)
Q Consensus 347 ~~~~~~~~I~HgG~~------s~~eal~~GvP~l~~P 377 (476)
.++.+ +++|.|-| .+++|-+.++|+|++-
T Consensus 74 g~~gv--~~~TsGpG~~N~~~gia~A~~~~vPvl~it 108 (603)
T 4feg_A 74 GKIGV--CFGSAGPGGTHLMNGLYDAREDHVPVLALI 108 (603)
T ss_dssp SSCEE--EEECTTHHHHTTHHHHHHHHHTTCCEEEEE
T ss_pred CCceE--EEecCCchHHHHHHHHHHHHHcCCCEEEEe
Confidence 34455 99999965 7889999999999874
No 266
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=23.53 E-value=4.1e+02 Score=23.92 Aligned_cols=108 Identities=11% Similarity=0.041 Sum_probs=59.9
Q ss_pred eEEEecCCcccCCHHHHHHHHHHHHhC-CCCeEEEEcCCCCCchhHHHHhcCCCeEeeccccHHHhhhCCCceeeecccC
Q 039701 281 AVYVCLGSLCDCSTRQLIELGLGLEAT-KKPFIWVIRPGDQAFEKFEERIEGRGLLIRGWAPQVVILSHPAIGGFLTHCG 359 (476)
Q Consensus 281 vv~vs~GS~~~~~~~~~~~i~~a~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~nv~~~~~vpq~~ll~~~~~~~~I~HgG 359 (476)
+..|.+|.+.. .++.++.+. +.+++.+...+....+.+.+ .-++. +-...+++..+++.+++----
T Consensus 6 vgiiG~G~~g~-------~~~~~l~~~~~~~l~av~d~~~~~~~~~~~---~~~~~---~~~~~~~l~~~~~D~V~i~tp 72 (331)
T 4hkt_A 6 FGLLGAGRIGK-------VHAKAVSGNADARLVAVADAFPAAAEAIAG---AYGCE---VRTIDAIEAAADIDAVVICTP 72 (331)
T ss_dssp EEEECCSHHHH-------HHHHHHHHCTTEEEEEEECSSHHHHHHHHH---HTTCE---ECCHHHHHHCTTCCEEEECSC
T ss_pred EEEECCCHHHH-------HHHHHHhhCCCcEEEEEECCCHHHHHHHHH---HhCCC---cCCHHHHhcCCCCCEEEEeCC
Confidence 67788887652 345556554 55655555433210122222 22443 566778888655555764332
Q ss_pred ----hhhHHHHHHcCCCEec-ccccc--cch-hhHHHHHHhhcceEEeccC
Q 039701 360 ----WNSVLEAVSNGLPMVT-WPFFA--DQF-CNEKLVVQVLRIGVTIGAE 402 (476)
Q Consensus 360 ----~~s~~eal~~GvP~l~-~P~~~--DQ~-~~a~~v~e~~g~G~~l~~~ 402 (476)
..-+.+++.+|++++| -|+.. ++- .....+ ++.|+-..+...
T Consensus 73 ~~~h~~~~~~al~~gk~v~~EKP~~~~~~~~~~l~~~a-~~~g~~~~v~~~ 122 (331)
T 4hkt_A 73 TDTHADLIERFARAGKAIFCEKPIDLDAERVRACLKVV-SDTKAKLMVGFN 122 (331)
T ss_dssp GGGHHHHHHHHHHTTCEEEECSCSCSSHHHHHHHHHHH-HHTTCCEEECCG
T ss_pred chhHHHHHHHHHHcCCcEEEecCCCCCHHHHHHHHHHH-HHcCCeEEEccc
Confidence 2456788999999887 36533 332 233344 577777666554
No 267
>1z0s_A Probable inorganic polyphosphate/ATP-NAD kinase; ATP-binding, structural genomics, NADP, PSI, protein structure initiative; HET: ATP; 1.70A {Archaeoglobus fulgidus} SCOP: e.52.1.1 PDB: 1z0u_A* 1z0z_A* 1suw_A*
Probab=23.47 E-value=71 Score=28.69 Aligned_cols=55 Identities=11% Similarity=0.107 Sum_probs=37.6
Q ss_pred HHHHHHHHHhCCCCeEEEEcCCCCCchhHHHHhcCCCeEeeccccHHHhhhCCCceeeecccChhhHHHHHHc--C-CCE
Q 039701 297 LIELGLGLEATKKPFIWVIRPGDQAFEKFEERIEGRGLLIRGWAPQVVILSHPAIGGFLTHCGWNSVLEAVSN--G-LPM 373 (476)
Q Consensus 297 ~~~i~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~nv~~~~~vpq~~ll~~~~~~~~I~HgG~~s~~eal~~--G-vP~ 373 (476)
...+.+.+++.+..+.+.-... ..+..+++ +|+-||-||+..|+.. + +|+
T Consensus 42 ~~~l~~~L~~~g~~v~~~~~~~-------------------------~~~~~~Dl--vIvlGGDGT~L~aa~~~~~~~Pi 94 (278)
T 1z0s_A 42 VKRIEEALKRLEVEVELFNQPS-------------------------EELENFDF--IVSVGGDGTILRILQKLKRCPPI 94 (278)
T ss_dssp HHHHHHHHHHTTCEEEEESSCC-------------------------GGGGGSSE--EEEEECHHHHHHHHTTCSSCCCE
T ss_pred HHHHHHHHHHCCCEEEEccccc-------------------------cccCCCCE--EEEECCCHHHHHHHHHhCCCCcE
Confidence 5667777877777765422110 01235677 9999999999999865 3 788
Q ss_pred ecccc
Q 039701 374 VTWPF 378 (476)
Q Consensus 374 l~~P~ 378 (476)
+.+..
T Consensus 95 lGIN~ 99 (278)
T 1z0s_A 95 FGINT 99 (278)
T ss_dssp EEEEC
T ss_pred EEECC
Confidence 88765
No 268
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=23.37 E-value=74 Score=29.19 Aligned_cols=33 Identities=15% Similarity=0.052 Sum_probs=27.5
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHHCCCeEEEEeC
Q 039701 8 QLHFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTT 44 (476)
Q Consensus 8 ~~~vl~~~~p~~GHv~P~l~La~~L~~rGH~Vt~~~~ 44 (476)
..||.|+-.+..| +-.+|+.|+++||+|+..=.
T Consensus 4 ~~~i~~iGiGg~G----ms~~A~~L~~~G~~V~~~D~ 36 (326)
T 3eag_A 4 MKHIHIIGIGGTF----MGGLAAIAKEAGFEVSGCDA 36 (326)
T ss_dssp CCEEEEESCCSHH----HHHHHHHHHHTTCEEEEEES
T ss_pred CcEEEEEEECHHH----HHHHHHHHHhCCCEEEEEcC
Confidence 3589999999887 45699999999999998743
No 269
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=23.31 E-value=4.2e+02 Score=24.00 Aligned_cols=109 Identities=16% Similarity=0.164 Sum_probs=60.5
Q ss_pred eEEEecCCcccCCHHHHHHHHHHHHhC-CCCeEEEEcCCCCCchhHHHHhcCCCeEeeccccHHHhhhCCCceeeecccC
Q 039701 281 AVYVCLGSLCDCSTRQLIELGLGLEAT-KKPFIWVIRPGDQAFEKFEERIEGRGLLIRGWAPQVVILSHPAIGGFLTHCG 359 (476)
Q Consensus 281 vv~vs~GS~~~~~~~~~~~i~~a~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~nv~~~~~vpq~~ll~~~~~~~~I~HgG 359 (476)
+..|..|.+.. .++.++.+. +..++.++..+. +........-++ ..+-...+++..+++.+++----
T Consensus 7 vgiiG~G~~g~-------~~~~~l~~~~~~~l~av~d~~~---~~~~~~a~~~g~--~~~~~~~~~l~~~~~D~V~i~tp 74 (344)
T 3euw_A 7 IALFGAGRIGH-------VHAANIAANPDLELVVIADPFI---EGAQRLAEANGA--EAVASPDEVFARDDIDGIVIGSP 74 (344)
T ss_dssp EEEECCSHHHH-------HHHHHHHHCTTEEEEEEECSSH---HHHHHHHHTTTC--EEESSHHHHTTCSCCCEEEECSC
T ss_pred EEEECCcHHHH-------HHHHHHHhCCCcEEEEEECCCH---HHHHHHHHHcCC--ceeCCHHHHhcCCCCCEEEEeCC
Confidence 67788887652 345556554 556555554332 222221112232 23456778888555555775444
Q ss_pred hh----hHHHHHHcCCCEec-cccccc--ch-hhHHHHHHhhcceEEeccC
Q 039701 360 WN----SVLEAVSNGLPMVT-WPFFAD--QF-CNEKLVVQVLRIGVTIGAE 402 (476)
Q Consensus 360 ~~----s~~eal~~GvP~l~-~P~~~D--Q~-~~a~~v~e~~g~G~~l~~~ 402 (476)
.. -+.+|+.+|++++| -|+..+ +- .....+ ++.|+-..+...
T Consensus 75 ~~~h~~~~~~al~~gk~v~~EKP~~~~~~~~~~l~~~a-~~~g~~~~v~~~ 124 (344)
T 3euw_A 75 TSTHVDLITRAVERGIPALCEKPIDLDIEMVRACKEKI-GDGASKVMLGFN 124 (344)
T ss_dssp GGGHHHHHHHHHHTTCCEEECSCSCSCHHHHHHHHHHH-GGGGGGEEECCG
T ss_pred chhhHHHHHHHHHcCCcEEEECCCCCCHHHHHHHHHHH-HhcCCeEEecch
Confidence 33 46788999999887 365433 32 233444 577776666544
No 270
>1jx7_A Hypothetical protein YCHN; NEW fold, hexamer, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; 2.80A {Escherichia coli} SCOP: c.114.1.1
Probab=23.28 E-value=1.2e+02 Score=22.46 Aligned_cols=28 Identities=7% Similarity=0.088 Sum_probs=22.7
Q ss_pred ccChHHHHHHHHHHHHC-CC-eEEEEeCCc
Q 039701 19 QGHMIPMIDIARLLAQH-GA-LVTIVTTPM 46 (476)
Q Consensus 19 ~GHv~P~l~La~~L~~r-GH-~Vt~~~~~~ 46 (476)
.......+.+|..+.+. || +|+++....
T Consensus 15 ~~~~~~al~~a~~~~~~~g~~~v~vff~~d 44 (117)
T 1jx7_A 15 SESLFNSLRLAIALREQESNLDLRLFLMSD 44 (117)
T ss_dssp CSHHHHHHHHHHHHHHHCTTCEEEEEECGG
T ss_pred cHHHHHHHHHHHHHHhcCCCccEEEEEEch
Confidence 45567789999999999 99 999887653
No 271
>2w36_A Endonuclease V; hypoxanthine, endonuclease, endonucleasev, hydrolase, inosine, DNA damage, DNA repair; HET: BRU; 2.10A {Thermotoga maritima} PDB: 2w35_A 3hd0_A
Probab=23.25 E-value=84 Score=27.17 Aligned_cols=39 Identities=13% Similarity=0.129 Sum_probs=27.0
Q ss_pred HHHHHHHhcCCCCeEEEecCCCch-------hHHHHhHcCCCcEEE
Q 039701 108 PLETLFKEIQPKPGCLISDVCLPW-------TVSSACKFNVPRIVF 146 (476)
Q Consensus 108 ~l~~~l~~~~~~~D~vI~D~~~~~-------~~~~A~~~giP~v~~ 146 (476)
.+.+.++++..+||+|++|..... |..+...+++|+|-+
T Consensus 92 ~~l~al~~L~~~PdlllvDG~Gi~HpR~~GlA~HlGv~l~~PtIGV 137 (225)
T 2w36_A 92 LFLKAWEKLRTKPDVVVFDGQGLAHPRKLGIASHMGLFIEIPTIGV 137 (225)
T ss_dssp HHHHHHTTCCSCCSEEEEESCSSSSTTSCCHHHHHHHHHTSCEEEE
T ss_pred HHHHHHHhcCCCCCEEEEeCeEEEcCCCCCchhhhhhhhCCCEEEE
Confidence 344555665578999999986432 455666679999974
No 272
>2f6k_A Metal-dependent hydrolase; metal dependent hydrolyse, aminohydro_2, ACMDS, ACMS, trypto metabolism, quinolinic acid, QUIN; 2.50A {Lactobacillus plantarum} SCOP: c.1.9.15
Probab=23.19 E-value=3.9e+02 Score=23.53 Aligned_cols=47 Identities=15% Similarity=-0.036 Sum_probs=27.3
Q ss_pred ccccccccCCCCCceEEEecCCcc---cCCHHHHHHHHHHHHhCCCCeEEEEc
Q 039701 267 SGCLKWLDSWQPGSAVYVCLGSLC---DCSTRQLIELGLGLEATKKPFIWVIR 316 (476)
Q Consensus 267 ~~l~~~l~~~~~~~vv~vs~GS~~---~~~~~~~~~i~~a~~~~~~~~i~~~~ 316 (476)
+++.++++..+ ++-|-+|... ......+..+++.+++.+..+++=.+
T Consensus 107 ~el~~~~~~~g---~~gi~~~~~~~~~~~~~~~~~~~~~~a~~~~lpv~iH~~ 156 (307)
T 2f6k_A 107 KTVQQALDQDG---ALGVTVPTNSRGLYFGSPVLERVYQELDARQAIVALHPN 156 (307)
T ss_dssp HHHHHHHHTSC---CSEEEEESEETTEETTCGGGHHHHHHHHTTTCEEEEECC
T ss_pred HHHHHHHhccC---CcEEEEeccCCCCCCCcHhHHHHHHHHHHcCCeEEECCC
Confidence 55666664322 2222333332 23346778889999999888765443
No 273
>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1
Probab=23.16 E-value=48 Score=30.37 Aligned_cols=21 Identities=14% Similarity=0.006 Sum_probs=18.3
Q ss_pred HHHHHHHHHCCCeEEEEeCCc
Q 039701 26 IDIARLLAQHGALVTIVTTPM 46 (476)
Q Consensus 26 l~La~~L~~rGH~Vt~~~~~~ 46 (476)
.+||+.+.++|++|+|+..+.
T Consensus 69 ~aiAe~~~~~Ga~V~lv~g~~ 89 (313)
T 1p9o_A 69 ATSAEAFLAAGYGVLFLYRAR 89 (313)
T ss_dssp HHHHHHHHHTTCEEEEEEETT
T ss_pred HHHHHHHHHCCCEEEEEecCC
Confidence 478999999999999998754
No 274
>3ll8_B Calcineurin subunit B type 1; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 1mf8_B* 2p6b_B 1aui_B 1m63_B* 1tco_B*
Probab=23.16 E-value=68 Score=24.83 Aligned_cols=57 Identities=4% Similarity=0.110 Sum_probs=35.4
Q ss_pred CcccchhHHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHh
Q 039701 414 GVPVKKEDVKKAINMLMDEGEERDERRRRAREYGETAKTAIEEGGSSYLNIKLLIKDILQQ 474 (476)
Q Consensus 414 ~~~~t~~~l~~~i~~ll~~~~~~~~~r~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~i~~~ 474 (476)
+|.++.+++.+.+..++... --.+.+..+-..+-+.++..|.+.-..++|++.+.++
T Consensus 89 ~G~i~~~e~~~~l~~~~~~~----~~~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~~ 145 (155)
T 3ll8_B 89 DGYISNGELFQVLKMMVGNN----LKDTQLQQIVDKTIINADKDGDGRISFEEFCAVVGGL 145 (155)
T ss_dssp SSCBCHHHHHHHHHHHHGGG----SCHHHHHHHHHHHHHHHCTTSSSSBCHHHHHHHHGGG
T ss_pred CCcCcHHHHHHHHHHHhccC----CCHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHhcc
Confidence 57899999999999864322 1122233333333223466677667788888877653
No 275
>3n0v_A Formyltetrahydrofolate deformylase; formyl transferase, ACT domain, structural genomics, joint C structural genomics, JCSG; HET: MSE; 2.25A {Pseudomonas putida}
Probab=23.15 E-value=4e+02 Score=23.76 Aligned_cols=107 Identities=12% Similarity=0.047 Sum_probs=0.0
Q ss_pred CCCCcEEEEEcCCCccChHHHHHHHHHHHHCCCeEEEEeC--CcchhhhhhHhhhcccCCCceEEEEeeCCCcccCCCCC
Q 039701 5 AGSQLHFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTT--PMNAARFQNVIERGIQSGLRIQVIEFYFPCQEVGLPEG 82 (476)
Q Consensus 5 ~~~~~~vl~~~~p~~GHv~P~l~La~~L~~rGH~Vt~~~~--~~~~~~~~~~~~~~~~~g~~i~~~~i~~~~~~~~~~~~ 82 (476)
.+ ++||+++.++. ||-.-.+--+..--+-..+|..+.+ +......+++ ++.+..+|.....
T Consensus 88 ~~-~~ri~vl~Sg~-g~~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~A~~~---------gIp~~~~~~~~~~------ 150 (286)
T 3n0v_A 88 NH-RPKVVIMVSKA-DHCLNDLLYRQRIGQLGMDVVAVVSNHPDLEPLAHWH---------KIPYYHFALDPKD------ 150 (286)
T ss_dssp TC-CCEEEEEESSC-CHHHHHHHHHHHTTSSCCEEEEEEESSSTTHHHHHHT---------TCCEEECCCBTTB------
T ss_pred CC-CcEEEEEEeCC-CCCHHHHHHHHHCCCCCcEEEEEEeCcHHHHHHHHHc---------CCCEEEeCCCcCC------
Q ss_pred CCCCCCCCCcCcHHHHHHHHHHchHHHHHHHHhcCCCCeEEEecCCC-chhHHHHhHcCCCcEEEecc
Q 039701 83 CESWDKLPSMALLPKFFAAIEMLRLPLETLFKEIQPKPGCLISDVCL-PWTVSSACKFNVPRIVFHGF 149 (476)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~D~vI~D~~~-~~~~~~A~~~giP~v~~~~~ 149 (476)
-....+.+.+.+++ .++|+||.-.+. .-...+...+.-.++-++++
T Consensus 151 -------------------r~~~~~~~~~~l~~--~~~Dlivla~y~~il~~~~l~~~~~~~iNiHpS 197 (286)
T 3n0v_A 151 -------------------KPGQERKVLQVIEE--TGAELVILARYMQVLSPELCRRLDGWAINIHHS 197 (286)
T ss_dssp -------------------HHHHHHHHHHHHHH--HTCSEEEESSCCSCCCHHHHHHTTTSEEEEEEC
T ss_pred -------------------HHHHHHHHHHHHHh--cCCCEEEecccccccCHHHHhhhcCCeEEeccc
No 276
>2vpq_A Acetyl-COA carboxylase; bacteria, ATP-grAsp domain, biotin carboxylase, ligase; HET: ANP; 2.1A {Staphylococcus aureus}
Probab=23.14 E-value=2.9e+02 Score=26.36 Aligned_cols=31 Identities=13% Similarity=0.187 Sum_probs=23.3
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHHCCCeEEEEeCC
Q 039701 10 HFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTTP 45 (476)
Q Consensus 10 ~vl~~~~p~~GHv~P~l~La~~L~~rGH~Vt~~~~~ 45 (476)
||+++- .| .-.+.+++++.+.|++|+++.+.
T Consensus 3 ~ilI~g---~g--~~~~~i~~a~~~~G~~vv~v~~~ 33 (451)
T 2vpq_A 3 KVLIAN---RG--EIAVRIIRACRDLGIQTVAIYSE 33 (451)
T ss_dssp EEEECC---CH--HHHHHHHHHHHHTTCEEEEEEEG
T ss_pred eEEEeC---CC--HHHHHHHHHHHHcCCEEEEEecc
Confidence 677764 22 35678999999999999988653
No 277
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=22.93 E-value=24 Score=31.98 Aligned_cols=33 Identities=24% Similarity=0.129 Sum_probs=27.2
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHHCCCeEEEEeCC
Q 039701 8 QLHFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTTP 45 (476)
Q Consensus 8 ~~~vl~~~~p~~GHv~P~l~La~~L~~rGH~Vt~~~~~ 45 (476)
.+||+|+-.|+.|- .+|..|.+.||+|+++...
T Consensus 2 ~mkI~iiGaGa~G~-----~~a~~L~~~g~~V~~~~r~ 34 (294)
T 3g17_A 2 SLSVAIIGPGAVGT-----TIAYELQQSLPHTTLIGRH 34 (294)
T ss_dssp -CCEEEECCSHHHH-----HHHHHHHHHCTTCEEEESS
T ss_pred CcEEEEECCCHHHH-----HHHHHHHHCCCeEEEEEec
Confidence 35899999888885 5788899999999999764
No 278
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E
Probab=22.87 E-value=1.1e+02 Score=26.50 Aligned_cols=34 Identities=29% Similarity=0.157 Sum_probs=24.2
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHHCCCeEEEEeCC
Q 039701 9 LHFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTTP 45 (476)
Q Consensus 9 ~~vl~~~~p~~GHv~P~l~La~~L~~rGH~Vt~~~~~ 45 (476)
-|+++++-++ |-+= ..+|+.|+++|++|.+....
T Consensus 9 gk~~lVTGas-~gIG--~a~a~~l~~~G~~V~~~~r~ 42 (248)
T 3op4_A 9 GKVALVTGAS-RGIG--KAIAELLAERGAKVIGTATS 42 (248)
T ss_dssp TCEEEESSCS-SHHH--HHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEeCCC-CHHH--HHHHHHHHHCCCEEEEEeCC
Confidence 3677777544 3232 47889999999999887643
No 279
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=22.83 E-value=3.9e+02 Score=23.47 Aligned_cols=60 Identities=15% Similarity=0.161 Sum_probs=29.9
Q ss_pred cCCCEecccccccch-----hhHHHHHHhhcc-eEEeccCCCCCCcccccCCcccchhHHHHHHHHHh
Q 039701 369 NGLPMVTWPFFADQF-----CNEKLVVQVLRI-GVTIGAERPPSLADEERNGVPVKKEDVKKAINMLM 430 (476)
Q Consensus 369 ~GvP~l~~P~~~DQ~-----~~a~~v~e~~g~-G~~l~~~~~~~~~~~~~~~~~~t~~~l~~~i~~ll 430 (476)
+|+|+++.|-+.-.. ..+...+ .+|+ |+.+.....++-+.. +....++++++.+.++.+.
T Consensus 191 ~~~pVi~d~sH~~g~~~~v~~~~~aAv-a~Ga~Gl~iE~H~~~d~al~-D~~~sl~p~~~~~l~~~i~ 256 (262)
T 1zco_A 191 SHLPIIVDPSHPAGRRSLVIPLAKAAY-AIGADGIMVEVHPEPEKALS-DSQQQLTFDDFLQLLKELE 256 (262)
T ss_dssp BSSCEEECSSTTTCSGGGHHHHHHHHH-HTTCSEEEEEBCSSGGGCSS-CTTTCBCHHHHHHHHHHHH
T ss_pred hCCCEEEEcCCCCCccchHHHHHHHHH-HcCCCEEEEEecCCccccCC-hhhcCCCHHHHHHHHHHHH
Confidence 367766666654332 3344343 4554 333322211111111 2335688888888887764
No 280
>2e6o_A HMG box-containing protein 1; HMG-box domain, HMG-box transcription factor 1, high mobility group box transcription factor 1, structural genomics; NMR {Homo sapiens}
Probab=22.80 E-value=1.3e+02 Score=21.22 Aligned_cols=38 Identities=16% Similarity=0.129 Sum_probs=30.5
Q ss_pred ccchhHHHHHHHHHhc--CChhhHHHHHHHHHHHHHHHHH
Q 039701 416 PVKKEDVKKAINMLMD--EGEERDERRRRAREYGETAKTA 453 (476)
Q Consensus 416 ~~t~~~l~~~i~~ll~--~~~~~~~~r~~a~~l~~~~~~~ 453 (476)
.++..+|.+.|.+.+. ++++++.|.+.|++++++..+.
T Consensus 42 ~~~~~eisk~lg~~Wk~ls~eeK~~y~~~A~~~k~~~~~~ 81 (87)
T 2e6o_A 42 GKDNRAISVILGDRWKKMKNEERRMYTLEAKALAEEQKRL 81 (87)
T ss_dssp TSCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHH
Confidence 4778889999988774 3577889999999999887654
No 281
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=22.79 E-value=31 Score=29.49 Aligned_cols=31 Identities=16% Similarity=0.103 Sum_probs=23.3
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHHCCCeEEEEeCC
Q 039701 10 HFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTTP 45 (476)
Q Consensus 10 ~vl~~~~p~~GHv~P~l~La~~L~~rGH~Vt~~~~~ 45 (476)
||+++-.+..| ..+|+.|.++||+|+++...
T Consensus 2 ~iiIiG~G~~G-----~~la~~L~~~g~~v~vid~~ 32 (218)
T 3l4b_C 2 KVIIIGGETTA-----YYLARSMLSRKYGVVIINKD 32 (218)
T ss_dssp CEEEECCHHHH-----HHHHHHHHHTTCCEEEEESC
T ss_pred EEEEECCCHHH-----HHHHHHHHhCCCeEEEEECC
Confidence 57777643333 47899999999999999753
No 282
>1k2x_A Putative L-asparaginase; NTN hydrolase, asparginase, autoproteolysis, hydrolase; HET: CME; 1.65A {Escherichia coli} SCOP: d.153.1.5 PDB: 1jn9_A* 1t3m_A 2zal_A
Probab=22.72 E-value=1.7e+02 Score=24.11 Aligned_cols=35 Identities=14% Similarity=0.095 Sum_probs=22.5
Q ss_pred HHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHH
Q 039701 439 RRRRAREYGETAKTAIEEGGSSYLNIKLLIKDILQ 473 (476)
Q Consensus 439 ~r~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~i~~ 473 (476)
|++..++.-..-.+.+..||++.++++..++.+|.
T Consensus 27 ~~~~l~~a~~~~~~~L~~g~saldAV~~av~~lEd 61 (177)
T 1k2x_A 27 YIEALSAIVETGQKMLEAGESALDVVTEAVRLLEE 61 (177)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhc
Confidence 33333333333333445699999999999998874
No 283
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=22.71 E-value=62 Score=23.80 Aligned_cols=32 Identities=22% Similarity=0.115 Sum_probs=23.3
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHHCC-CeEEEEeCC
Q 039701 9 LHFILFPFLAQGHMIPMIDIARLLAQHG-ALVTIVTTP 45 (476)
Q Consensus 9 ~~vl~~~~p~~GHv~P~l~La~~L~~rG-H~Vt~~~~~ 45 (476)
++|+++-.+..| ..+++.|.++| |+|+.+...
T Consensus 6 ~~v~I~G~G~iG-----~~~~~~l~~~g~~~v~~~~r~ 38 (118)
T 3ic5_A 6 WNICVVGAGKIG-----QMIAALLKTSSNYSVTVADHD 38 (118)
T ss_dssp EEEEEECCSHHH-----HHHHHHHHHCSSEEEEEEESC
T ss_pred CeEEEECCCHHH-----HHHHHHHHhCCCceEEEEeCC
Confidence 578888544434 46788999999 999887653
No 284
>1zi8_A Carboxymethylenebutenolidase; alpha and beta proteins, 3-D structure, serine esterase, HYD aromatic hydrocarbons, catabolism; 1.40A {Pseudomonas putida} PDB: 1zj5_A* 1zi9_A 1zi6_A 1zj4_A* 1din_A 1ziy_A* 1zic_A 1zix_A 1ggv_A*
Probab=22.58 E-value=1.1e+02 Score=25.45 Aligned_cols=38 Identities=13% Similarity=-0.016 Sum_probs=30.0
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHHCCCeEEEEeCC
Q 039701 8 QLHFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTTP 45 (476)
Q Consensus 8 ~~~vl~~~~p~~GHv~P~l~La~~L~~rGH~Vt~~~~~ 45 (476)
+..++++..+..|...-+..+++.|+++|+.|..+-..
T Consensus 27 ~~p~vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~ 64 (236)
T 1zi8_A 27 PAPVIVIAQDIFGVNAFMRETVSWLVDQGYAAVCPDLY 64 (236)
T ss_dssp SEEEEEEECCTTBSCHHHHHHHHHHHHTTCEEEEECGG
T ss_pred CCCEEEEEcCCCCCCHHHHHHHHHHHhCCcEEEecccc
Confidence 34566667788888888999999999999998777543
No 285
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=22.52 E-value=58 Score=29.36 Aligned_cols=31 Identities=23% Similarity=0.277 Sum_probs=26.1
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHHCCCeEEEEeC
Q 039701 9 LHFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTT 44 (476)
Q Consensus 9 ~~vl~~~~p~~GHv~P~l~La~~L~~rGH~Vt~~~~ 44 (476)
+||+|+-.|..|. .+|..|.++||+|+++..
T Consensus 4 m~i~iiG~G~~G~-----~~a~~l~~~g~~V~~~~r 34 (316)
T 2ew2_A 4 MKIAIAGAGAMGS-----RLGIMLHQGGNDVTLIDQ 34 (316)
T ss_dssp CEEEEECCSHHHH-----HHHHHHHHTTCEEEEECS
T ss_pred CeEEEECcCHHHH-----HHHHHHHhCCCcEEEEEC
Confidence 5899998877774 578999999999999865
No 286
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=22.52 E-value=63 Score=29.52 Aligned_cols=31 Identities=23% Similarity=0.198 Sum_probs=25.3
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHHCCCeEEEEeC
Q 039701 9 LHFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTT 44 (476)
Q Consensus 9 ~~vl~~~~p~~GHv~P~l~La~~L~~rGH~Vt~~~~ 44 (476)
+||+|+-.+..|. .+|..|.++||+|+++..
T Consensus 1 m~I~iiG~G~mG~-----~~a~~L~~~g~~V~~~~r 31 (335)
T 1txg_A 1 MIVSILGAGAMGS-----ALSVPLVDNGNEVRIWGT 31 (335)
T ss_dssp CEEEEESCCHHHH-----HHHHHHHHHCCEEEEECC
T ss_pred CEEEEECcCHHHH-----HHHHHHHhCCCeEEEEEc
Confidence 3788888877774 568899999999999875
No 287
>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*
Probab=22.50 E-value=2.2e+02 Score=25.00 Aligned_cols=33 Identities=18% Similarity=0.145 Sum_probs=25.5
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHHCCCeEEEEeCC
Q 039701 10 HFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTTP 45 (476)
Q Consensus 10 ~vl~~~~p~~GHv~P~l~La~~L~~rGH~Vt~~~~~ 45 (476)
|+++++-++.| += .++|+.|++.|.+|.+..-.
T Consensus 8 KvalVTGas~G-IG--~aia~~la~~Ga~Vv~~~r~ 40 (258)
T 4gkb_A 8 KVVIVTGGASG-IG--GAISMRLAEERAIPVVFARH 40 (258)
T ss_dssp CEEEEETTTSH-HH--HHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEeCCCCH-HH--HHHHHHHHHcCCEEEEEECC
Confidence 78999866654 22 57889999999999988653
No 288
>3afo_A NADH kinase POS5; alpha/beta+BETA sandwich, ATP-binding, mitochondrion NADP, nucleotide-binding, transferase, transit peptide; HET: NAI; 2.00A {Saccharomyces cerevisiae}
Probab=22.35 E-value=45 Score=31.69 Aligned_cols=35 Identities=20% Similarity=0.407 Sum_probs=27.1
Q ss_pred HHHhhhCCCceeeecccChhhHHHHHHc----CC-CEecccc
Q 039701 342 QVVILSHPAIGGFLTHCGWNSVLEAVSN----GL-PMVTWPF 378 (476)
Q Consensus 342 q~~ll~~~~~~~~I~HgG~~s~~eal~~----Gv-P~l~~P~ 378 (476)
...+-..+++ +|+-||-||+..|+.. ++ |++.+..
T Consensus 108 ~~~~~~~~Dl--VIvlGGDGTlL~aa~~~~~~~vpPiLGIN~ 147 (388)
T 3afo_A 108 EQDIVNRTDL--LVTLGGDGTILHGVSMFGNTQVPPVLAFAL 147 (388)
T ss_dssp HHHHHHHCSE--EEEEESHHHHHHHHHTTTTSCCCCEEEEEC
T ss_pred hhhcccCCCE--EEEEeCcHHHHHHHHHhcccCCCeEEEEEC
Confidence 3445556788 9999999999999754 67 7888864
No 289
>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=22.20 E-value=98 Score=27.28 Aligned_cols=39 Identities=26% Similarity=0.200 Sum_probs=25.4
Q ss_pred CCCCCCCCcEEEEEcCCCccChHHHHHHHHHHHHCCCeEEEEeCC
Q 039701 1 MASQAGSQLHFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTTP 45 (476)
Q Consensus 1 m~~~~~~~~~vl~~~~p~~GHv~P~l~La~~L~~rGH~Vt~~~~~ 45 (476)
|..+.+ |+++++ ++.|-+= ..+|+.|+++|++|+++.-.
T Consensus 1 m~~~~~---k~vlVT-Gas~gIG--~~ia~~l~~~G~~V~~~~r~ 39 (278)
T 1spx_A 1 MTRFAE---KVAIIT-GSSNGIG--RATAVLFAREGAKVTITGRH 39 (278)
T ss_dssp -CTTTT---CEEEET-TTTSHHH--HHHHHHHHHTTCEEEEEESC
T ss_pred CCCCCC---CEEEEe-CCCchHH--HHHHHHHHHCCCEEEEEeCC
Confidence 555433 566776 3334332 36889999999999988643
No 290
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=22.18 E-value=2e+02 Score=24.93 Aligned_cols=32 Identities=22% Similarity=0.113 Sum_probs=23.1
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHHCCCeEEEEeC
Q 039701 10 HFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTT 44 (476)
Q Consensus 10 ~vl~~~~p~~GHv~P~l~La~~L~~rGH~Vt~~~~ 44 (476)
|+++++-++.| += .++|++|+++|++|.++..
T Consensus 9 k~vlVTGas~G-IG--~aia~~la~~G~~V~~~~~ 40 (259)
T 3edm_A 9 RTIVVAGAGRD-IG--RACAIRFAQEGANVVLTYN 40 (259)
T ss_dssp CEEEEETTTSH-HH--HHHHHHHHHTTCEEEEEEC
T ss_pred CEEEEECCCch-HH--HHHHHHHHHCCCEEEEEcC
Confidence 57777744432 32 4789999999999998743
No 291
>3g1w_A Sugar ABC transporter; sugar-binding protein, bacillus halod target 11229F, transport protein, structural genomics; 2.02A {Bacillus halodurans c-125}
Probab=22.11 E-value=3.9e+02 Score=23.26 Aligned_cols=86 Identities=13% Similarity=0.131 Sum_probs=0.0
Q ss_pred CCCCCcEEEEEcCCCccChHHHH--HHHHHHHHCCCeEEEEeCCcchhhhhhHhhhcccCCCceEEEEeeCCCcccCCCC
Q 039701 4 QAGSQLHFILFPFLAQGHMIPMI--DIARLLAQHGALVTIVTTPMNAARFQNVIERGIQSGLRIQVIEFYFPCQEVGLPE 81 (476)
Q Consensus 4 ~~~~~~~vl~~~~p~~GHv~P~l--~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~g~~i~~~~i~~~~~~~~~~~ 81 (476)
|++ +.+|+++.......+.--+ .+-+++.++|+++.+.........-+..
T Consensus 1 ~s~-~~~I~~i~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~--------------------------- 52 (305)
T 3g1w_A 1 MSL-NETYMMITFQSGMDYWKRCLKGFEDAAQALNVTVEYRGAAQYDIQEQIT--------------------------- 52 (305)
T ss_dssp -----CEEEEEESSTTSTHHHHHHHHHHHHHHHHTCEEEEEECSSSCHHHHHH---------------------------
T ss_pred CCC-CceEEEEEccCCChHHHHHHHHHHHHHHHcCCEEEEeCCCcCCHHHHHH---------------------------
Q ss_pred CCCCCCCCCCcCcHHHHHHHHHHchHHHHHHHHhcCCCCeEEEecCCCch----hHHHHhHcCCCcEEE
Q 039701 82 GCESWDKLPSMALLPKFFAAIEMLRLPLETLFKEIQPKPGCLISDVCLPW----TVSSACKFNVPRIVF 146 (476)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~D~vI~D~~~~~----~~~~A~~~giP~v~~ 146 (476)
.+..++.. ++|.||....... ....+...|||+|.+
T Consensus 53 --------------------------~i~~l~~~---~vdgiIi~~~~~~~~~~~~~~~~~~~iPvV~~ 92 (305)
T 3g1w_A 53 --------------------------VLEQAIAK---NPAGIAISAIDPVELTDTINKAVDAGIPIVLF 92 (305)
T ss_dssp --------------------------HHHHHHHH---CCSEEEECCSSTTTTHHHHHHHHHTTCCEEEE
T ss_pred --------------------------HHHHHHHh---CCCEEEEcCCCHHHHHHHHHHHHHCCCcEEEE
No 292
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Probab=21.93 E-value=1.3e+02 Score=26.43 Aligned_cols=33 Identities=21% Similarity=0.094 Sum_probs=22.8
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHHCCCeEEEEeC
Q 039701 9 LHFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTT 44 (476)
Q Consensus 9 ~~vl~~~~p~~GHv~P~l~La~~L~~rGH~Vt~~~~ 44 (476)
-|+++++-++. -+= .++|++|+++|++|.+...
T Consensus 27 ~k~~lVTGas~-GIG--~aia~~la~~G~~Vv~~~~ 59 (267)
T 3u5t_A 27 NKVAIVTGASR-GIG--AAIAARLASDGFTVVINYA 59 (267)
T ss_dssp CCEEEEESCSS-HHH--HHHHHHHHHHTCEEEEEES
T ss_pred CCEEEEeCCCC-HHH--HHHHHHHHHCCCEEEEEcC
Confidence 36777774433 222 4788999999999998743
No 293
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12}
Probab=21.91 E-value=1.8e+02 Score=21.37 Aligned_cols=38 Identities=8% Similarity=0.092 Sum_probs=26.8
Q ss_pred CCCCCCCCcEEEEEcCCCccChHHHHHHHHHHHHCCCeEEEEe
Q 039701 1 MASQAGSQLHFILFPFLAQGHMIPMIDIARLLAQHGALVTIVT 43 (476)
Q Consensus 1 m~~~~~~~~~vl~~~~p~~GHv~P~l~La~~L~~rGH~Vt~~~ 43 (476)
|....+ ++||+++- .|-.-...|.+.|.+.|++|+.+.
T Consensus 1 M~~~~~-~~~ilivd----d~~~~~~~l~~~L~~~g~~v~~~~ 38 (130)
T 3eod_A 1 MTQPLV-GKQILIVE----DEQVFRSLLDSWFSSLGATTVLAA 38 (130)
T ss_dssp --CTTT-TCEEEEEC----SCHHHHHHHHHHHHHTTCEEEEES
T ss_pred CCCCCC-CCeEEEEe----CCHHHHHHHHHHHHhCCceEEEeC
Confidence 555555 77999885 455566778888888999988754
No 294
>1mio_B Nitrogenase molybdenum iron protein (beta chain); HET: HCA CFM CLP; 3.00A {Clostridium pasteurianum} SCOP: c.92.2.3
Probab=21.89 E-value=84 Score=30.52 Aligned_cols=34 Identities=24% Similarity=0.222 Sum_probs=27.3
Q ss_pred HHHHHHHhcCCCCeEEEecCCCchhHHHHhHcCCCcEEE
Q 039701 108 PLETLFKEIQPKPGCLISDVCLPWTVSSACKFNVPRIVF 146 (476)
Q Consensus 108 ~l~~~l~~~~~~~D~vI~D~~~~~~~~~A~~~giP~v~~ 146 (476)
++++++++ .+||++|.+.. ...+|+++|||++.+
T Consensus 376 ~l~~~i~~--~~pDl~ig~~~---~~~~a~k~gip~~~~ 409 (458)
T 1mio_B 376 DVHQWIKN--EGVDLLISNTY---GKFIAREENIPFVRF 409 (458)
T ss_dssp HHHHHHHH--SCCSEEEESGG---GHHHHHHHTCCEEEC
T ss_pred HHHHHHHh--cCCCEEEeCcc---hHHHHHHcCCCEEEe
Confidence 45666777 79999998854 577899999999974
No 295
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=21.72 E-value=84 Score=28.33 Aligned_cols=33 Identities=15% Similarity=0.204 Sum_probs=23.5
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHHCCCeEEEEeCCc
Q 039701 10 HFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTTPM 46 (476)
Q Consensus 10 ~vl~~~~p~~GHv~P~l~La~~L~~rGH~Vt~~~~~~ 46 (476)
+|+++ |+.|.+= ..|+++|.++||+|+.++-..
T Consensus 13 ~ilVt--GatG~iG--~~l~~~L~~~g~~V~~l~R~~ 45 (318)
T 2r6j_A 13 KILIF--GGTGYIG--NHMVKGSLKLGHPTYVFTRPN 45 (318)
T ss_dssp CEEEE--TTTSTTH--HHHHHHHHHTTCCEEEEECTT
T ss_pred eEEEE--CCCchHH--HHHHHHHHHCCCcEEEEECCC
Confidence 56665 4445443 467899999999999887643
No 296
>3u7q_A Nitrogenase molybdenum-iron protein alpha chain; multiple rossmann fold domains, reductase, nitrogen fixing, oxidoreductase; HET: HCA ICS 1CL CLF; 1.00A {Azotobacter vinelandii} SCOP: c.92.2.3 PDB: 1g21_A* 1g20_A* 1fp4_A* 1m1n_A* 1l5h_A* 1m1y_A* 1m34_A* 1n2c_A* 2afh_A* 2afi_A* 2afk_A* 2min_A* 3min_A* 3k1a_A* 1h1l_A* 1qgu_A* 1qh1_A* 1qh8_A*
Probab=21.67 E-value=66 Score=31.66 Aligned_cols=35 Identities=20% Similarity=0.160 Sum_probs=27.6
Q ss_pred HHHHHHHHhcCCCCeEEEecCCCchhHHHHhHcCCCcEEE
Q 039701 107 LPLETLFKEIQPKPGCLISDVCLPWTVSSACKFNVPRIVF 146 (476)
Q Consensus 107 ~~l~~~l~~~~~~~D~vI~D~~~~~~~~~A~~~giP~v~~ 146 (476)
.++.+.+++ .+||++|... ....+|+++|||++.+
T Consensus 407 ~el~~~i~~--~~pDL~ig~~---~~~~ia~k~gIP~~~~ 441 (492)
T 3u7q_A 407 YEFEEFVKR--IKPDLIGSGI---KEKFIFQKMGIPFREM 441 (492)
T ss_dssp HHHHHHHHH--HCCSEEEECH---HHHHHHHHTTCCEEES
T ss_pred HHHHHHHHh--cCCcEEEeCc---chhHHHHHcCCCEEec
Confidence 345666776 7999999973 4578999999999963
No 297
>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}
Probab=21.64 E-value=1e+02 Score=27.49 Aligned_cols=33 Identities=21% Similarity=0.161 Sum_probs=23.5
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHHCCCeEEEEeCC
Q 039701 10 HFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTTP 45 (476)
Q Consensus 10 ~vl~~~~p~~GHv~P~l~La~~L~~rGH~Vt~~~~~ 45 (476)
|+++++-++ |-+= ..+|+.|+++|++|+++.-.
T Consensus 17 k~vlVTGas-~gIG--~~~a~~L~~~G~~V~~~~r~ 49 (291)
T 3rd5_A 17 RTVVITGAN-SGLG--AVTARELARRGATVIMAVRD 49 (291)
T ss_dssp CEEEEECCS-SHHH--HHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEeCCC-ChHH--HHHHHHHHHCCCEEEEEECC
Confidence 566776443 3332 58899999999999988643
No 298
>2vbi_A Pyruvate decarboxylase; thiamine pyrophosphate, lyase, pyruv flavoprotein, THDP-dependent enzyme; HET: TPP; 2.75A {Acetobacter pasteurianus}
Probab=21.57 E-value=1.7e+02 Score=29.15 Aligned_cols=28 Identities=14% Similarity=0.121 Sum_probs=22.6
Q ss_pred ceeeecccCh------hhHHHHHHcCCCEecccc
Q 039701 351 IGGFLTHCGW------NSVLEAVSNGLPMVTWPF 378 (476)
Q Consensus 351 ~~~~I~HgG~------~s~~eal~~GvP~l~~P~ 378 (476)
.+++++|.|- +.++||-+.++|+|++--
T Consensus 66 ~~v~~~TsGpG~~N~~~gia~A~~~~vPll~itg 99 (566)
T 2vbi_A 66 AAAAVVTFSVGAISAMNALGGAYAENLPVILISG 99 (566)
T ss_dssp CEEEEECTTTTHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred CeEEEEeCCCCHHHHHHHHHHHHhhCCCEEEEEC
Confidence 4448888885 688899999999999843
No 299
>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2
Probab=21.57 E-value=97 Score=26.96 Aligned_cols=39 Identities=28% Similarity=0.268 Sum_probs=24.9
Q ss_pred CCCCCCCCcEEEEEcCCCccChHHHHHHHHHHHHCCCeEEEEeCC
Q 039701 1 MASQAGSQLHFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTTP 45 (476)
Q Consensus 1 m~~~~~~~~~vl~~~~p~~GHv~P~l~La~~L~~rGH~Vt~~~~~ 45 (476)
|.++.+ |+++++ ++.|-+= ..+|+.|+++|++|+++.-.
T Consensus 1 M~~l~~---k~vlVT-Gas~gIG--~~ia~~l~~~G~~V~~~~r~ 39 (256)
T 2d1y_A 1 MGLFAG---KGVLVT-GGARGIG--RAIAQAFAREGALVALCDLR 39 (256)
T ss_dssp -CTTTT---CEEEEE-TTTSHHH--HHHHHHHHHTTCEEEEEESS
T ss_pred CCCCCC---CEEEEe-CCCCHHH--HHHHHHHHHCCCEEEEEeCC
Confidence 555433 456666 3334332 36889999999999987654
No 300
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=21.51 E-value=3.2e+02 Score=23.63 Aligned_cols=40 Identities=20% Similarity=0.220 Sum_probs=26.7
Q ss_pred CCCCCCCCcEEEEEcCCCccChHHHHHHHHHHHHCCCeEEEEeC
Q 039701 1 MASQAGSQLHFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTT 44 (476)
Q Consensus 1 m~~~~~~~~~vl~~~~p~~GHv~P~l~La~~L~~rGH~Vt~~~~ 44 (476)
|-+..+ |+++++-.+.+.=+ =.++|+.|+++|++|.+..-
T Consensus 1 M~~l~g---K~alVTGaa~~~GI-G~aiA~~la~~Ga~Vvi~~r 40 (256)
T 4fs3_A 1 MLNLEN---KTYVIMGIANKRSI-AFGVAKVLDQLGAKLVFTYR 40 (256)
T ss_dssp CCCCTT---CEEEEECCCSTTCH-HHHHHHHHHHTTCEEEEEES
T ss_pred CcCCCC---CEEEEECCCCCchH-HHHHHHHHHHCCCEEEEEEC
Confidence 455555 68888753221101 16789999999999998764
No 301
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A*
Probab=21.48 E-value=5.1e+02 Score=24.30 Aligned_cols=126 Identities=15% Similarity=0.183 Sum_probs=66.0
Q ss_pred eEEEecCCcccCCHHHHHHHHHHHHhCCCCeEEEEcCCCCCchhHHHHhcCCCeEeeccccHHHhhhC--CCceeeeccc
Q 039701 281 AVYVCLGSLCDCSTRQLIELGLGLEATKKPFIWVIRPGDQAFEKFEERIEGRGLLIRGWAPQVVILSH--PAIGGFLTHC 358 (476)
Q Consensus 281 vv~vs~GS~~~~~~~~~~~i~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~nv~~~~~vpq~~ll~~--~~~~~~I~Hg 358 (476)
++-|..|++.+ ..+++++++.+.+++++.+-... ++.+..-+ ..+... .++ +++||
T Consensus 228 ~lkIgs~~~~n------~~LL~~~a~~gkPVilk~G~~~t-~~e~~~Av-------------e~i~~~Gn~~i--~L~~r 285 (385)
T 3nvt_A 228 VIQIGARNMQN------FELLKAAGRVDKPILLKRGLSAT-IEEFIGAA-------------EYIMSQGNGKI--ILCER 285 (385)
T ss_dssp EEEECGGGTTC------HHHHHHHHTSSSCEEEECCTTCC-HHHHHHHH-------------HHHHTTTCCCE--EEEEC
T ss_pred EEEECcccccC------HHHHHHHHccCCcEEEecCCCCC-HHHHHHHH-------------HHHHHcCCCeE--EEEEC
Confidence 56666665543 35778888899999988876332 33332211 012222 345 88888
Q ss_pred Chhh------------HHHHHH--cCCCEeccccccc--ch---hhHHHHHHhhcc-eEEeccCCCCCCcccccCCcccc
Q 039701 359 GWNS------------VLEAVS--NGLPMVTWPFFAD--QF---CNEKLVVQVLRI-GVTIGAERPPSLADEERNGVPVK 418 (476)
Q Consensus 359 G~~s------------~~eal~--~GvP~l~~P~~~D--Q~---~~a~~v~e~~g~-G~~l~~~~~~~~~~~~~~~~~~t 418 (476)
|..| ....+. +|+|+++=|.++. .. ..+...+ -+|+ |+.+.....++-+. ++..-.++
T Consensus 286 G~s~yp~~~~~~ldl~~i~~lk~~~~lpV~~D~th~~G~r~~v~~~a~AAv-A~GA~gl~iE~H~~pd~a~-~D~~~sl~ 363 (385)
T 3nvt_A 286 GIRTYEKATRNTLDISAVPILKKETHLPVMVDVTHSTGRKDLLLPCAKAAL-AIEADGVMAEVHPDPAVAL-SDSAQQMD 363 (385)
T ss_dssp CBCCSCCSSSSBCCTTHHHHHHHHBSSCEEEEHHHHHCCGGGHHHHHHHHH-HTTCSEEEEEBCSCGGGCS-SCTTTSBC
T ss_pred CCCCCCCCCccccCHHHHHHHHHhcCCCEEEcCCCCCCccchHHHHHHHHH-HhCCCEEEEEecCChhhcC-CcccccCC
Confidence 6431 122232 5889766555442 21 2344443 6676 34443321111111 22334678
Q ss_pred hhHHHHHHHHHh
Q 039701 419 KEDVKKAINMLM 430 (476)
Q Consensus 419 ~~~l~~~i~~ll 430 (476)
++++.+.++.+.
T Consensus 364 p~el~~lv~~i~ 375 (385)
T 3nvt_A 364 IPEFEEFWNAIL 375 (385)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 888888777664
No 302
>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*
Probab=21.38 E-value=1.1e+02 Score=26.89 Aligned_cols=34 Identities=18% Similarity=0.065 Sum_probs=23.3
Q ss_pred EEEEEcCCCc-cChHHHHHHHHHHHHCCCeEEEEeCC
Q 039701 10 HFILFPFLAQ-GHMIPMIDIARLLAQHGALVTIVTTP 45 (476)
Q Consensus 10 ~vl~~~~p~~-GHv~P~l~La~~L~~rGH~Vt~~~~~ 45 (476)
|+++++-++. |-+= ..+|+.|+++|++|+++.-.
T Consensus 7 k~vlVTGas~~~gIG--~~~a~~l~~~G~~V~~~~r~ 41 (275)
T 2pd4_A 7 KKGLIVGVANNKSIA--YGIAQSCFNQGATLAFTYLN 41 (275)
T ss_dssp CEEEEECCCSTTSHH--HHHHHHHHTTTCEEEEEESS
T ss_pred CEEEEECCCCCCcHH--HHHHHHHHHCCCEEEEEeCC
Confidence 4566664331 3333 47899999999999988654
No 303
>1eyh_A Epsin; superhelix of helices, cell cycle; 1.56A {Rattus norvegicus} SCOP: a.118.9.1 PDB: 1h0a_A* 1edu_A
Probab=21.33 E-value=92 Score=24.79 Aligned_cols=35 Identities=20% Similarity=0.236 Sum_probs=28.2
Q ss_pred cchhHHHHHHHHHhcCChhhHHHHHHHHHHHHHHH
Q 039701 417 VKKEDVKKAINMLMDEGEERDERRRRAREYGETAK 451 (476)
Q Consensus 417 ~t~~~l~~~i~~ll~~~~~~~~~r~~a~~l~~~~~ 451 (476)
.+-.+-++.|-.+|.|++.-++-|++|++++.++.
T Consensus 107 ~~VR~kak~l~~Ll~D~~~L~~eR~~a~~~r~k~~ 141 (144)
T 1eyh_A 107 VNVREKAKQLVALLRDEDRLREERAHALKTKEKLA 141 (144)
T ss_dssp HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHh
Confidence 44456666777888999888899999999998876
No 304
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=21.29 E-value=61 Score=29.79 Aligned_cols=33 Identities=18% Similarity=0.104 Sum_probs=27.1
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHHCCCeEEEEeCC
Q 039701 8 QLHFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTTP 45 (476)
Q Consensus 8 ~~~vl~~~~p~~GHv~P~l~La~~L~~rGH~Vt~~~~~ 45 (476)
..+|.|+-.|.+|. .+|..|+++||+|++....
T Consensus 6 ~~kI~vIGaG~MG~-----~iA~~la~~G~~V~l~d~~ 38 (319)
T 2dpo_A 6 AGDVLIVGSGLVGR-----SWAMLFASGGFRVKLYDIE 38 (319)
T ss_dssp -CEEEEECCSHHHH-----HHHHHHHHTTCCEEEECSC
T ss_pred CceEEEEeeCHHHH-----HHHHHHHHCCCEEEEEeCC
Confidence 35899999888884 6789999999999998653
No 305
>3ol3_A Putative uncharacterized protein; tuberculosis, RV0543C, ortholog, iodide ION S phasing, structural genomics; HET: PG4 PGE; 1.95A {Mycobacterium smegmatis} PDB: 3ol4_A
Probab=21.24 E-value=2.6e+02 Score=20.85 Aligned_cols=71 Identities=10% Similarity=0.283 Sum_probs=48.8
Q ss_pred CCCeEeeccccHHHhhhCCCceeeecccChhhHHHHHHcCCCEecccccccch--hhHHHHHHhhcceEEeccCCCCCCc
Q 039701 331 GRGLLIRGWAPQVVILSHPAIGGFLTHCGWNSVLEAVSNGLPMVTWPFFADQF--CNEKLVVQVLRIGVTIGAERPPSLA 408 (476)
Q Consensus 331 ~~nv~~~~~vpq~~ll~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~--~~a~~v~e~~g~G~~l~~~~~~~~~ 408 (476)
|.++--.+|+|..+||.+- + .|.. ..+..+. ..|-. .
T Consensus 25 PeGVP~~Dy~PLlALL~R~-L----------------------------tddev~~Va~~L~-~~~~~-----~------ 63 (107)
T 3ol3_A 25 PEGVPPKDYFALLALLKRS-L----------------------------TEDEVVRAAQAIL-RSTDG-----Q------ 63 (107)
T ss_dssp TTCBCGGGHHHHHHHHTCC-C----------------------------CHHHHHHHHHHHH-HHCCS-----S------
T ss_pred CCCCCCCccHHHHHHhccc-C----------------------------CHHHHHHHHHHHH-hccCC-----C------
Confidence 6777788999999999763 5 3332 4556664 44431 1
Q ss_pred ccccCCcccchhHHHHHHHHHhcCChhhHHHHHHHHHHHHHHHH
Q 039701 409 DEERNGVPVKKEDVKKAINMLMDEGEERDERRRRAREYGETAKT 452 (476)
Q Consensus 409 ~~~~~~~~~t~~~l~~~i~~ll~~~~~~~~~r~~a~~l~~~~~~ 452 (476)
..++..+|..+|.++.+.. .--+...++++++.+
T Consensus 64 ------~pi~~~dI~~~It~vT~~~----P~~eDi~RV~arLaa 97 (107)
T 3ol3_A 64 ------SPVTDDDIRNAVHQIIEKE----PTAEEINQVAARLAS 97 (107)
T ss_dssp ------SCBCHHHHHHHHHHHHSSC----CCHHHHHHHHHHHHT
T ss_pred ------CCCCHHHHHHHHHHHhcCC----cCHHHHHHHHHHHHh
Confidence 1489999999999999765 555666666666553
No 306
>1hry_A Human SRY; DNA, DNA-binding protein, DNA binding protein/DNA complex; HET: DNA; NMR {Homo sapiens} SCOP: a.21.1.1 PDB: 1hrz_A*
Probab=21.23 E-value=1.2e+02 Score=20.55 Aligned_cols=38 Identities=8% Similarity=0.128 Sum_probs=29.7
Q ss_pred ccchhHHHHHHHHHhc--CChhhHHHHHHHHHHHHHHHHH
Q 039701 416 PVKKEDVKKAINMLMD--EGEERDERRRRAREYGETAKTA 453 (476)
Q Consensus 416 ~~t~~~l~~~i~~ll~--~~~~~~~~r~~a~~l~~~~~~~ 453 (476)
.++..+|.+.|.+.+. ++++++.|.+.|++.+++..+.
T Consensus 29 ~~~~~eisk~lg~~Wk~ls~~eK~~y~~~A~~~k~~y~~~ 68 (76)
T 1hry_A 29 RMRNSEISKQLGYQWKMLTEAEKWPFFQEAQKLQAMHREK 68 (76)
T ss_dssp CCSSSHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHhHHHhCCHHHHHHHHHHHHHHHHHHHHH
Confidence 4677788888888764 3567789999999998887754
No 307
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=21.17 E-value=52 Score=28.26 Aligned_cols=29 Identities=17% Similarity=0.224 Sum_probs=22.4
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHHCCCeEEEEe
Q 039701 10 HFILFPFLAQGHMIPMIDIARLLAQHGALVTIVT 43 (476)
Q Consensus 10 ~vl~~~~p~~GHv~P~l~La~~L~~rGH~Vt~~~ 43 (476)
.|+|+--+--| +.+|..|+++|++|+++=
T Consensus 4 dV~IIGaGpaG-----L~aA~~La~~G~~V~v~E 32 (336)
T 3kkj_A 4 PIAIIGTGIAG-----LSAAQALTAAGHQVHLFD 32 (336)
T ss_dssp CEEEECCSHHH-----HHHHHHHHHTTCCEEEEC
T ss_pred CEEEECcCHHH-----HHHHHHHHHCCCCEEEEE
Confidence 46666655444 788999999999999984
No 308
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=21.15 E-value=65 Score=31.28 Aligned_cols=32 Identities=25% Similarity=0.214 Sum_probs=26.3
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHHCCCeEEEEeCC
Q 039701 9 LHFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTTP 45 (476)
Q Consensus 9 ~~vl~~~~p~~GHv~P~l~La~~L~~rGH~Vt~~~~~ 45 (476)
+||.++-.|..| ..+|..|+++||+|+++...
T Consensus 3 mkI~VIG~G~vG-----~~lA~~La~~G~~V~~~D~~ 34 (450)
T 3gg2_A 3 LDIAVVGIGYVG-----LVSATCFAELGANVRCIDTD 34 (450)
T ss_dssp CEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSC
T ss_pred CEEEEECcCHHH-----HHHHHHHHhcCCEEEEEECC
Confidence 589999877766 46899999999999988643
No 309
>2c5m_A CTP synthase; cytidine 5-prime triphosphate synthetase, CTP synthetase, UTP, glutamine, amidotransferase, ligase, phosphorylation; 2.80A {Homo sapiens} PDB: 2vo1_A 3ihl_A*
Probab=21.02 E-value=62 Score=28.66 Aligned_cols=38 Identities=21% Similarity=0.240 Sum_probs=31.6
Q ss_pred CcEEEEEcCC---CccChHHHHHHHHHHHHCCCeEEEEeCC
Q 039701 8 QLHFILFPFL---AQGHMIPMIDIARLLAQHGALVTIVTTP 45 (476)
Q Consensus 8 ~~~vl~~~~p---~~GHv~P~l~La~~L~~rGH~Vt~~~~~ 45 (476)
++|++|++-+ +.|-=.-.-+|+..|.+||++||.+--.
T Consensus 22 ~mKyIfVTGGVvSglGKGi~aaSlG~LLk~rG~~Vt~~KiD 62 (294)
T 2c5m_A 22 SMKYILVTGGVISGIGKGIIASSVGTILKSCGLHVTSIKID 62 (294)
T ss_dssp CCEEEEEEECSSTTSCHHHHHHHHHHHHHTTTCCEECCEEE
T ss_pred ceEEEEEcCccccccchHHHHHHHHHHHHHCCCeeEEEecC
Confidence 5789999877 5666788889999999999999987443
No 310
>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*
Probab=21.01 E-value=56 Score=29.84 Aligned_cols=37 Identities=22% Similarity=0.128 Sum_probs=21.5
Q ss_pred CCCCCCCCcEEEEEcCCCccChHHHHHHHHHHHHCCCeEEEEeC
Q 039701 1 MASQAGSQLHFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTT 44 (476)
Q Consensus 1 m~~~~~~~~~vl~~~~p~~GHv~P~l~La~~L~~rGH~Vt~~~~ 44 (476)
|+.+++ +|+ ++ |+.|-+= ..|+++|.++||+|+.+.-
T Consensus 1 ~~~~~~---~vl-VT-GatGfIG--~~l~~~L~~~G~~V~~~~r 37 (337)
T 2c29_D 1 MGSQSE---TVC-VT-GASGFIG--SWLVMRLLERGYTVRATVR 37 (337)
T ss_dssp -----C---EEE-ET-TTTSHHH--HHHHHHHHHTTCEEEEEES
T ss_pred CCCCCC---EEE-EE-CCchHHH--HHHHHHHHHCCCEEEEEEC
Confidence 554433 444 44 5555443 3688999999999987653
No 311
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=21.01 E-value=1.9e+02 Score=26.99 Aligned_cols=36 Identities=11% Similarity=-0.038 Sum_probs=25.8
Q ss_pred ceEEEecCCcccCCHHHHHHHHHHHHhCCCCeEEEEcC
Q 039701 280 SAVYVCLGSLCDCSTRQLIELGLGLEATKKPFIWVIRP 317 (476)
Q Consensus 280 ~vv~vs~GS~~~~~~~~~~~i~~a~~~~~~~~i~~~~~ 317 (476)
.+++++.|+.+- ...+..++++|.+.|.+|.+....
T Consensus 22 rIl~~~~~~~GH--v~p~l~La~~L~~~Gh~V~v~~~~ 57 (415)
T 3rsc_A 22 HLLIVNVASHGL--ILPTLTVVTELVRRGHRVSYVTAG 57 (415)
T ss_dssp EEEEECCSCHHH--HGGGHHHHHHHHHTTCEEEEEECG
T ss_pred EEEEEeCCCccc--cccHHHHHHHHHHCCCEEEEEeCH
Confidence 378888876542 233456889999999999888743
No 312
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=20.88 E-value=76 Score=27.62 Aligned_cols=33 Identities=27% Similarity=0.242 Sum_probs=27.1
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHHCCCeEEEEeCC
Q 039701 8 QLHFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTTP 45 (476)
Q Consensus 8 ~~~vl~~~~p~~GHv~P~l~La~~L~~rGH~Vt~~~~~ 45 (476)
.++|.|+-.+.+|. .||+.|+++||+|++....
T Consensus 19 ~~kIgiIG~G~mG~-----alA~~L~~~G~~V~~~~r~ 51 (245)
T 3dtt_A 19 GMKIAVLGTGTVGR-----TMAGALADLGHEVTIGTRD 51 (245)
T ss_dssp CCEEEEECCSHHHH-----HHHHHHHHTTCEEEEEESC
T ss_pred CCeEEEECCCHHHH-----HHHHHHHHCCCEEEEEeCC
Confidence 57899998777774 5799999999999988654
No 313
>1s8n_A Putative antiterminator; RV1626, structural genomics, transcriptional antiterminator, component system, PSI; 1.48A {Mycobacterium tuberculosis} SCOP: c.23.1.1 PDB: 1sd5_A
Probab=20.88 E-value=3.4e+02 Score=22.04 Aligned_cols=107 Identities=15% Similarity=0.075 Sum_probs=55.4
Q ss_pred CCHHHHHHHHHHHHhCCCCeEEEEcCCCCCchhHHHHhcCCCeEeecc-ccHHHhhhCCCceeeecccChhhHHHHHHc-
Q 039701 292 CSTRQLIELGLGLEATKKPFIWVIRPGDQAFEKFEERIEGRGLLIRGW-APQVVILSHPAIGGFLTHCGWNSVLEAVSN- 369 (476)
Q Consensus 292 ~~~~~~~~i~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~nv~~~~~-vpq~~ll~~~~~~~~I~HgG~~s~~eal~~- 369 (476)
.++.....+...++..++.++....+.....+.+.. .+..+++.++ .|.. .|. .+.+.+..
T Consensus 21 d~~~~~~~l~~~L~~~g~~v~~~~~~~~~al~~~~~--~~~dlvi~D~~~p~~--------------~g~-~~~~~l~~~ 83 (205)
T 1s8n_A 21 DEALIRMDLAEMLREEGYEIVGEAGDGQEAVELAEL--HKPDLVIMDVKMPRR--------------DGI-DAASEIASK 83 (205)
T ss_dssp SSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHH--HCCSEEEEESSCSSS--------------CHH-HHHHHHHHT
T ss_pred CCHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhh--cCCCEEEEeCCCCCC--------------ChH-HHHHHHHhc
Confidence 345555667777877888877454433210111111 1234444332 1110 111 23344432
Q ss_pred -CCCEecccccccchhhHHHHHHhhcceEEeccCCCCCCcccccCCcccchhHHHHHHHHHhc
Q 039701 370 -GLPMVTWPFFADQFCNEKLVVQVLRIGVTIGAERPPSLADEERNGVPVKKEDVKKAINMLMD 431 (476)
Q Consensus 370 -GvP~l~~P~~~DQ~~~a~~v~e~~g~G~~l~~~~~~~~~~~~~~~~~~t~~~l~~~i~~ll~ 431 (476)
..|+|++--..| ....... -+.|+--.+.+- ++.++|..+|+.++.
T Consensus 84 ~~~pii~lt~~~~-~~~~~~~-~~~ga~~~l~KP--------------~~~~~L~~~i~~~~~ 130 (205)
T 1s8n_A 84 RIAPIVVLTAFSQ-RDLVERA-RDAGAMAYLVKP--------------FSISDLIPAIELAVS 130 (205)
T ss_dssp TCSCEEEEEEGGG-HHHHHTT-GGGSCEEEEEES--------------CCHHHHHHHHHHHHH
T ss_pred CCCCEEEEecCCC-HHHHHHH-HhcCCcEEEeCC--------------CCHHHHHHHHHHHHH
Confidence 346666544444 3444444 266766556553 899999999999885
No 314
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=20.87 E-value=50 Score=30.25 Aligned_cols=33 Identities=15% Similarity=0.048 Sum_probs=27.8
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHHCC-CeEEEEeCC
Q 039701 8 QLHFILFPFLAQGHMIPMIDIARLLAQHG-ALVTIVTTP 45 (476)
Q Consensus 8 ~~~vl~~~~p~~GHv~P~l~La~~L~~rG-H~Vt~~~~~ 45 (476)
.++|.|+-.+..| ..+|..|+++| |+|++....
T Consensus 24 ~m~IgvIG~G~mG-----~~lA~~L~~~G~~~V~~~dr~ 57 (317)
T 4ezb_A 24 MTTIAFIGFGEAA-----QSIAGGLGGRNAARLAAYDLR 57 (317)
T ss_dssp CCEEEEECCSHHH-----HHHHHHHHTTTCSEEEEECGG
T ss_pred CCeEEEECccHHH-----HHHHHHHHHcCCCeEEEEeCC
Confidence 3589999988888 67899999999 999987643
No 315
>4eto_A Protein S100-A4; calcium-binding protein, EF-hand, structural genomics, PSI-B protein structure initiative, NEW YORK structural genomics consortium; 1.54A {Homo sapiens} PDB: 1m31_A 2q91_A 3cga_A 3ko0_A* 3m0w_A*
Probab=20.86 E-value=59 Score=23.42 Aligned_cols=55 Identities=5% Similarity=0.074 Sum_probs=35.2
Q ss_pred cccchhHHHHHHHHHhcCChhhHHHHH--HHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHhc
Q 039701 415 VPVKKEDVKKAINMLMDEGEERDERRR--RAREYGETAKTAIEEGGSSYLNIKLLIKDILQQA 475 (476)
Q Consensus 415 ~~~t~~~l~~~i~~ll~~~~~~~~~r~--~a~~l~~~~~~~~~~gg~~~~~~~~~~~~i~~~~ 475 (476)
+.++.++|+..++.-+.+ .+.. .-..+.+.+++ ++..|.+.-..++|+..+.+++
T Consensus 27 G~Is~~EL~~~l~~~lg~-----~l~~~~~~~ev~~~i~~-~D~d~DG~Idf~EF~~~~~~~~ 83 (93)
T 4eto_A 27 FKLNKSELKELLTRELPS-----FLGKRTDEAAFQKLMSN-LDSNRDNEVDFQEYCVFLSCIA 83 (93)
T ss_dssp TSBCHHHHHHHHHHHCGG-----GC---CCHHHHHHHHHH-HCTTSSSSBCHHHHHHHHHHHH
T ss_pred CeECHHHHHHHHHHHhhh-----hccCCCCHHHHHHHHHH-HCCCCCCCCcHHHHHHHHHHHH
Confidence 689999999999874421 0111 12234444443 5777888888999998887654
No 316
>3zzm_A Bifunctional purine biosynthesis protein PURH; transferase, hydrolase; HET: JLN; 2.20A {Mycobacterium tuberculosis} PDB: 4a1o_A*
Probab=20.85 E-value=1.7e+02 Score=28.61 Aligned_cols=42 Identities=17% Similarity=0.218 Sum_probs=29.6
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHHCCCeEEEEeCCcchhhhhhH
Q 039701 8 QLHFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTTPMNAARFQNV 54 (476)
Q Consensus 8 ~~~vl~~~~p~~GHv~P~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~ 54 (476)
++|-+|++. .+-.-++.+|+.|.+.|.++. +|......+++.
T Consensus 9 ~i~~aLISV---sDK~glvelAk~L~~lGfeI~--ATgGTak~L~e~ 50 (523)
T 3zzm_A 9 PIRRALISV---YDKTGLVDLAQGLSAAGVEII--STGSTAKTIADT 50 (523)
T ss_dssp CCCEEEEEE---SSCTTHHHHHHHHHHTTCEEE--ECHHHHHHHHTT
T ss_pred cccEEEEEE---eccccHHHHHHHHHHCCCEEE--EcchHHHHHHHc
Confidence 455566655 567789999999999998875 555455555555
No 317
>1byi_A Dethiobiotin synthase; biotin synthesis, cyclo-ligase, ligase; 0.97A {Escherichia coli} SCOP: c.37.1.10 PDB: 1bs1_A* 1a82_A 1dad_A* 1dae_A* 1daf_A* 1dag_A* 1dah_A* 1dai_A* 1dak_A* 1dam_A* 1dbs_A 1dts_A
Probab=20.74 E-value=1.1e+02 Score=25.86 Aligned_cols=32 Identities=6% Similarity=0.032 Sum_probs=27.0
Q ss_pred EEEEcC-CCccChHHHHHHHHHHHHCCCeEEEE
Q 039701 11 FILFPF-LAQGHMIPMIDIARLLAQHGALVTIV 42 (476)
Q Consensus 11 vl~~~~-p~~GHv~P~l~La~~L~~rGH~Vt~~ 42 (476)
|++... ++-|-..=.++||..|+++|++|.++
T Consensus 4 I~v~s~kgGvGKTt~a~nLa~~la~~G~rVll~ 36 (224)
T 1byi_A 4 YFVTGTDTEVGKTVASCALLQAAKAAGYRTAGY 36 (224)
T ss_dssp EEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEE
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEE
Confidence 444443 68899999999999999999999986
No 318
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=20.62 E-value=57 Score=30.49 Aligned_cols=33 Identities=18% Similarity=0.201 Sum_probs=28.3
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHHCCCeEEEEeCC
Q 039701 8 QLHFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTTP 45 (476)
Q Consensus 8 ~~~vl~~~~p~~GHv~P~l~La~~L~~rGH~Vt~~~~~ 45 (476)
.+||.|+-.+.+|. .+|..|++.||+|++....
T Consensus 29 ~mkI~VIGaG~mG~-----alA~~La~~G~~V~l~~r~ 61 (356)
T 3k96_A 29 KHPIAILGAGSWGT-----ALALVLARKGQKVRLWSYE 61 (356)
T ss_dssp CSCEEEECCSHHHH-----HHHHHHHTTTCCEEEECSC
T ss_pred CCeEEEECccHHHH-----HHHHHHHHCCCeEEEEeCC
Confidence 46899999988884 6899999999999998764
No 319
>1xgw_A Epsin 4; ENTH, enthoprotin, clathrin-associated, endocytosis; 1.90A {Homo sapiens} PDB: 2qy7_A 2v8s_E
Probab=20.44 E-value=46 Score=27.61 Aligned_cols=36 Identities=11% Similarity=0.208 Sum_probs=22.1
Q ss_pred ccchhHHHHHHHHHhcCChhhHHHHHHHHHHHHHHH
Q 039701 416 PVKKEDVKKAINMLMDEGEERDERRRRAREYGETAK 451 (476)
Q Consensus 416 ~~t~~~l~~~i~~ll~~~~~~~~~r~~a~~l~~~~~ 451 (476)
..+-.+-++.|-.+|.|++.-++-|++|++.+.++.
T Consensus 136 G~~VR~kAk~i~~LL~D~e~Lr~eR~ka~k~r~k~~ 171 (176)
T 1xgw_A 136 GINIRQKVKELVEFAQDDDRLREERKKAKKNKDKYV 171 (176)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHC--------
T ss_pred HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHhhcc
Confidence 345566677777889999888899999999888876
No 320
>2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A
Probab=20.43 E-value=3.4e+02 Score=21.81 Aligned_cols=91 Identities=13% Similarity=0.089 Sum_probs=49.4
Q ss_pred HHHHHHHHHHCCCeEEEEeCCcchhhhhhHhhhcccCCCceEEEEeeCCCcccCCCCCCCCCCCCCCcCcHHHHHHHHHH
Q 039701 25 MIDIARLLAQHGALVTIVTTPMNAARFQNVIERGIQSGLRIQVIEFYFPCQEVGLPEGCESWDKLPSMALLPKFFAAIEM 104 (476)
Q Consensus 25 ~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~g~~i~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 104 (476)
...+.+.|.++|+.|.+++.......+...++...... .+..+.+. . . ..
T Consensus 73 ~~e~L~~L~~~G~~v~ivT~~~~~~~~~~~l~~~gl~~-~f~~~~~~--------~----------~-~k---------- 122 (187)
T 2wm8_A 73 VPEVLKRLQSLGVPGAAASRTSEIEGANQLLELFDLFR-YFVHREIY--------P----------G-SK---------- 122 (187)
T ss_dssp HHHHHHHHHHHTCCEEEEECCSCHHHHHHHHHHTTCTT-TEEEEEES--------S----------S-CH----------
T ss_pred HHHHHHHHHHCCceEEEEeCCCChHHHHHHHHHcCcHh-hcceeEEE--------e----------C-ch----------
Confidence 56788889999999999987543333444433221111 12222110 0 0 00
Q ss_pred chHHHHHHHHhcCCCCe--EEEecCCCchhHHHHhHcCCCcEEEec
Q 039701 105 LRLPLETLFKEIQPKPG--CLISDVCLPWTVSSACKFNVPRIVFHG 148 (476)
Q Consensus 105 ~~~~l~~~l~~~~~~~D--~vI~D~~~~~~~~~A~~~giP~v~~~~ 148 (476)
...+..+++.++..++ ++|.|. ..-...|+..|++++.+..
T Consensus 123 -~~~~~~~~~~~~~~~~~~~~igD~--~~Di~~a~~aG~~~i~v~~ 165 (187)
T 2wm8_A 123 -ITHFERLQQKTGIPFSQMIFFDDE--RRNIVDVSKLGVTCIHIQN 165 (187)
T ss_dssp -HHHHHHHHHHHCCCGGGEEEEESC--HHHHHHHHTTTCEEEECSS
T ss_pred -HHHHHHHHHHcCCChHHEEEEeCC--ccChHHHHHcCCEEEEECC
Confidence 1123444444334443 556665 4567789999999987543
No 321
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=20.38 E-value=2.4e+02 Score=26.20 Aligned_cols=31 Identities=16% Similarity=0.362 Sum_probs=22.9
Q ss_pred CCCceeeecccC-hhhHHHHHHcCCCEecccccc
Q 039701 348 HPAIGGFLTHCG-WNSVLEAVSNGLPMVTWPFFA 380 (476)
Q Consensus 348 ~~~~~~~I~HgG-~~s~~eal~~GvP~l~~P~~~ 380 (476)
.+++ +|+|++ .++..-|-..|+|.++.....
T Consensus 130 ~pDv--Vv~~~~~~~~~~aa~~~giP~v~~~~~~ 161 (412)
T 3otg_A 130 RPDL--VVQEISNYGAGLAALKAGIPTICHGVGR 161 (412)
T ss_dssp CCSE--EEEETTCHHHHHHHHHHTCCEEEECCSC
T ss_pred CCCE--EEECchhhHHHHHHHHcCCCEEEecccc
Confidence 6888 898854 455566778999999876543
No 322
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=20.37 E-value=72 Score=27.98 Aligned_cols=30 Identities=20% Similarity=0.177 Sum_probs=24.0
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHHCCCeEEEEe
Q 039701 9 LHFILFPFLAQGHMIPMIDIARLLAQHGALVTIVT 43 (476)
Q Consensus 9 ~~vl~~~~p~~GHv~P~l~La~~L~~rGH~Vt~~~ 43 (476)
++|.|+-.+.+|. .+|+.|.+.||+|++..
T Consensus 1 M~I~iIG~G~mG~-----~la~~l~~~g~~V~~~~ 30 (264)
T 1i36_A 1 LRVGFIGFGEVAQ-----TLASRLRSRGVEVVTSL 30 (264)
T ss_dssp CEEEEESCSHHHH-----HHHHHHHHTTCEEEECC
T ss_pred CeEEEEechHHHH-----HHHHHHHHCCCeEEEeC
Confidence 3688887777775 57899999999999853
No 323
>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2
Probab=20.27 E-value=1.1e+02 Score=26.93 Aligned_cols=39 Identities=23% Similarity=0.204 Sum_probs=24.9
Q ss_pred CCCCCCCCcEEEEEcCCCccChHHHHHHHHHHHHCCCeEEEEeCC
Q 039701 1 MASQAGSQLHFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTTP 45 (476)
Q Consensus 1 m~~~~~~~~~vl~~~~p~~GHv~P~l~La~~L~~rGH~Vt~~~~~ 45 (476)
|.++.+ ++++++-+ .|-+= ..+|+.|+++|++|+++.-.
T Consensus 1 m~~l~~---k~vlITGa-s~gIG--~aia~~l~~~G~~V~~~~r~ 39 (263)
T 2a4k_A 1 MGRLSG---KTILVTGA-ASGIG--RAALDLFAREGASLVAVDRE 39 (263)
T ss_dssp -CTTTT---CEEEEEST-TSHHH--HHHHHHHHHTTCEEEEEESC
T ss_pred CCCCCC---CEEEEECC-CCHHH--HHHHHHHHHCCCEEEEEeCC
Confidence 555433 56666633 33332 46889999999999988643
No 324
>3bfv_A CAPA1, CAPB2, membrane protein CAPA1, protein tyrosine kinase; chimerical protein, P-loop protein, capsule biogenesis/degradation; HET: ADP; 1.80A {Staphylococcus aureus} PDB: 2ved_A*
Probab=20.20 E-value=1.1e+02 Score=27.22 Aligned_cols=38 Identities=21% Similarity=0.163 Sum_probs=31.1
Q ss_pred CcEEEEEcC--CCccChHHHHHHHHHHHHCCCeEEEEeCC
Q 039701 8 QLHFILFPF--LAQGHMIPMIDIARLLAQHGALVTIVTTP 45 (476)
Q Consensus 8 ~~~vl~~~~--p~~GHv~P~l~La~~L~~rGH~Vt~~~~~ 45 (476)
+.++++++. |+-|-..=..+||..|+++|.+|.++-..
T Consensus 81 ~~kvI~vts~kgG~GKTt~a~nLA~~lA~~G~rVLLID~D 120 (271)
T 3bfv_A 81 AVQSIVITSEAPGAGKSTIAANLAVAYAQAGYKTLIVDGD 120 (271)
T ss_dssp CCCEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CCeEEEEECCCCCCcHHHHHHHHHHHHHhCCCeEEEEeCC
Confidence 456666654 58899999999999999999999998554
No 325
>3sbx_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: AMP; 2.50A {Mycobacterium marinum M}
Probab=20.17 E-value=1.5e+02 Score=24.85 Aligned_cols=37 Identities=8% Similarity=-0.076 Sum_probs=26.8
Q ss_pred CcEEEEEcCCCccCh----HHHHHHHHHHHHCCCeEEEEeCC
Q 039701 8 QLHFILFPFLAQGHM----IPMIDIARLLAQHGALVTIVTTP 45 (476)
Q Consensus 8 ~~~vl~~~~p~~GHv----~P~l~La~~L~~rGH~Vt~~~~~ 45 (476)
+++|.++.... +.- .-...|++.|+++|+.|..-..+
T Consensus 13 ~~~I~Vfg~s~-~~~~~~~~~A~~lg~~la~~g~~lv~GGG~ 53 (189)
T 3sbx_A 13 RWTVAVYCAAA-PTHPELLELAGAVGAAIAARGWTLVWGGGH 53 (189)
T ss_dssp CCEEEEECCSS-CCCHHHHHHHHHHHHHHHHTTCEEEECCBC
T ss_pred CeEEEEEEeCC-CCChHHHHHHHHHHHHHHHCCCEEEECCCc
Confidence 57899988655 433 44568888889999988776544
No 326
>3jte_A Response regulator receiver protein; structural genomics, nysgrc, response regulator receiver DOM target 11226E, PSI-2; 1.90A {Clostridium thermocellum atcc 27405}
Probab=20.11 E-value=2.8e+02 Score=20.72 Aligned_cols=47 Identities=17% Similarity=0.077 Sum_probs=31.5
Q ss_pred cCCCEecccccccchhhHHHHHHhhcceEEeccCCCCCCcccccCCcccchhHHHHHHHHHhc
Q 039701 369 NGLPMVTWPFFADQFCNEKLVVQVLRIGVTIGAERPPSLADEERNGVPVKKEDVKKAINMLMD 431 (476)
Q Consensus 369 ~GvP~l~~P~~~DQ~~~a~~v~e~~g~G~~l~~~~~~~~~~~~~~~~~~t~~~l~~~i~~ll~ 431 (476)
..+|+|++--..|. ....+. -+.|+--.+.+. ++.++|..+|++++.
T Consensus 76 ~~~~ii~ls~~~~~-~~~~~~-~~~g~~~~l~kp--------------~~~~~l~~~l~~~~~ 122 (143)
T 3jte_A 76 PHMAVIILTGHGDL-DNAILA-MKEGAFEYLRKP--------------VTAQDLSIAINNAIN 122 (143)
T ss_dssp TTCEEEEEECTTCH-HHHHHH-HHTTCSEEEESS--------------CCHHHHHHHHHHHHH
T ss_pred CCCeEEEEECCCCH-HHHHHH-HHhCcceeEeCC--------------CCHHHHHHHHHHHHH
Confidence 46777776544443 334444 266766566553 899999999999985
No 327
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Probab=20.09 E-value=2.3e+02 Score=24.92 Aligned_cols=32 Identities=25% Similarity=0.256 Sum_probs=23.0
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHHCCCeEEEEeC
Q 039701 10 HFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTT 44 (476)
Q Consensus 10 ~vl~~~~p~~GHv~P~l~La~~L~~rGH~Vt~~~~ 44 (476)
|+++++-++.| += ..+|++|+++|++|+++.-
T Consensus 26 k~~lVTGas~G-IG--~~ia~~la~~G~~V~~~~r 57 (281)
T 3v2h_A 26 KTAVITGSTSG-IG--LAIARTLAKAGANIVLNGF 57 (281)
T ss_dssp CEEEEETCSSH-HH--HHHHHHHHHTTCEEEEECC
T ss_pred CEEEEeCCCcH-HH--HHHHHHHHHCCCEEEEEeC
Confidence 56777744432 22 4789999999999988764
No 328
>4fbl_A LIPS lipolytic enzyme; thermostable, structural genomics, enzyme function initiativ structural proteomics in europe, spine; HET: SPD; 1.99A {Unidentified} PDB: 4fbm_A
Probab=20.04 E-value=69 Score=28.23 Aligned_cols=34 Identities=18% Similarity=0.079 Sum_probs=26.1
Q ss_pred EEEEcCCCccChHHHHHHHHHHHHCCCeEEEEeCC
Q 039701 11 FILFPFLAQGHMIPMIDIARLLAQHGALVTIVTTP 45 (476)
Q Consensus 11 vl~~~~p~~GHv~P~l~La~~L~~rGH~Vt~~~~~ 45 (476)
|+| -.|..|+-.-+..+|+.|+++|++|..+--+
T Consensus 54 Vll-lHG~~~s~~~~~~la~~La~~Gy~Via~Dl~ 87 (281)
T 4fbl_A 54 VLV-SHGFTGSPQSMRFLAEGFARAGYTVATPRLT 87 (281)
T ss_dssp EEE-ECCTTCCGGGGHHHHHHHHHTTCEEEECCCT
T ss_pred EEE-ECCCCCCHHHHHHHHHHHHHCCCEEEEECCC
Confidence 554 4677777777888999999999998765433
Done!