Your job contains 1 sequence.
>039703
MKKPNHTSDNISQNPSASSKITFPPRKIRKLTTITPITKIAEIPVATAISTNSDNSPKIF
KPLTFKGEVDIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAK
SIYTRFVALFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIV
EMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGAL
KMEEVCEKWKPYRSVGSWYMWRLMEAKGVLPNVAKAAVTSVEAA
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 039703
(284 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2016457 - symbol:AT1G19480 species:3702 "Arabi... 752 3.2e-79 2
TAIR|locus:2025127 - symbol:AT1G75230 species:3702 "Arabi... 767 3.9e-76 1
TAIR|locus:2077947 - symbol:AT3G50880 species:3702 "Arabi... 755 7.3e-75 1
ASPGD|ASPL0000073519 - symbol:AN4389 species:162425 "Emer... 255 1.8e-32 2
POMBASE|SPAPB24D3.04c - symbol:mag1 "DNA-3-methyladenine ... 288 2.2e-25 1
UNIPROTKB|Q0BWS7 - symbol:HNE_3393 "Putative DNA-3-methyl... 240 2.7e-20 1
POMBASE|SPBC23G7.11 - symbol:mag2 "DNA-3-methyladenine gl... 228 5.1e-19 1
CGD|CAL0000388 - symbol:orf19.3639 species:5476 "Candida ... 205 7.8e-18 2
UNIPROTKB|Q59Y10 - symbol:MAG1 "Putative uncharacterized ... 205 7.8e-18 2
SGD|S000000944 - symbol:MAG1 "3-methyl-adenine DNA glycos... 195 8.0e-18 2
UNIPROTKB|Q5LRK0 - symbol:SPO2127 "DNA-3-methyladenine gl... 205 1.4e-16 1
TIGR_CMR|SPO_2127 - symbol:SPO_2127 "DNA-3-methyladenine ... 205 1.4e-16 1
TIGR_CMR|BA_3871 - symbol:BA_3871 "DNA-3-methyladenine gl... 199 8.4e-15 1
UNIPROTKB|Q10630 - symbol:alkA "Probable bifunctional tra... 138 1.6e-06 1
UNIPROTKB|P04395 - symbol:alkA species:83333 "Escherichia... 111 0.00067 1
>TAIR|locus:2016457 [details] [associations]
symbol:AT1G19480 species:3702 "Arabidopsis thaliana"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006284 "base-excision repair" evidence=IEA;ISS]
InterPro:IPR003265 InterPro:IPR011257 Pfam:PF00730 SMART:SM00478
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0003824 GO:GO:0006284
Gene3D:1.10.340.30 SUPFAM:SSF48150 eggNOG:COG0122 KO:K01247
Gene3D:1.10.1670.10 InterPro:IPR023170 HOGENOM:HOG000261908
EMBL:BT026466 IPI:IPI00542919 RefSeq:NP_564085.1 UniGene:At.41746
ProteinModelPortal:Q0V7V4 SMR:Q0V7V4 PRIDE:Q0V7V4
EnsemblPlants:AT1G19480.1 GeneID:838533 KEGG:ath:AT1G19480
TAIR:At1g19480 InParanoid:Q0V7V4 OMA:DNESATA PhylomeDB:Q0V7V4
ProtClustDB:CLSN2684571 Genevestigator:Q0V7V4 Uniprot:Q0V7V4
Length = 382
Score = 752 (269.8 bits), Expect = 3.2e-79, Sum P(2) = 3.2e-79
Identities = 143/226 (63%), Positives = 182/226 (80%)
Query: 57 PKI-FKPLTFKGEVDIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLA 115
P+I +PLT +GE++ A+ +LR+ DPLLA LID H PPTFES ++PFL+L ++ILYQQLA
Sbjct: 126 PRIQARPLTCEGELETAIHYLRNADPLLAALIDVHPPPTFESFKTPFLALIRNILYQQLA 185
Query: 116 YKAAKSIYTRFVALFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILS 175
KA SIYTRFV+L GE+ ++P+ VL+++PQQLR+IGVS RKASYL DLA KY +GILS
Sbjct: 186 MKAGNSIYTRFVSLCGGENLVVPETVLSLNPQQLRQIGVSGRKASYLHDLARKYQNGILS 245
Query: 176 DESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKE 235
D +I+ MD+ ++F MLT V GIG+WSVHMFMI SLH+PDVLPV DLGVRKG+Q+LYGL +
Sbjct: 246 DSAILNMDEKSLFTMLTMVNGIGSWSVHMFMINSLHRPDVLPVNDLGVRKGVQLLYGLDD 305
Query: 236 LPGALKMEEVCEKWKPYRSVGSWYMWRLMEAKGVLPNVAKAAVTSV 281
LP +ME+ C KW+PYRSVGSWYMWRL+EAK + A AA S+
Sbjct: 306 LPRPSQMEQHCAKWRPYRSVGSWYMWRLIEAKSTSTSAAVAAGVSL 351
Score = 63 (27.2 bits), Expect = 3.2e-79, Sum P(2) = 3.2e-79
Identities = 21/48 (43%), Positives = 26/48 (54%)
Query: 10 NISQNPSASSKITFPPRKIRKLTTITPITKIAEIPVATAISTNSDNSP 57
N+S PS KI PRKIRKLT ++ E A IS++ NSP
Sbjct: 62 NVSSPPS---KIPLRPRKIRKLTLDGDVS--GEDYKAEDISSSQVNSP 104
>TAIR|locus:2025127 [details] [associations]
symbol:AT1G75230 species:3702 "Arabidopsis thaliana"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006284 "base-excision repair" evidence=IEA;ISS]
InterPro:IPR003265 InterPro:IPR011257 Pfam:PF00730 SMART:SM00478
EMBL:CP002684 GO:GO:0005634 GO:GO:0003824 GO:GO:0006284
Gene3D:1.10.340.30 SUPFAM:SSF48150 KO:K01247 Gene3D:1.10.1670.10
InterPro:IPR023170 IPI:IPI00532637 RefSeq:NP_974147.1
UniGene:At.18305 ProteinModelPortal:F4HXH4 SMR:F4HXH4 PRIDE:F4HXH4
EnsemblPlants:AT1G75230.2 GeneID:843860 KEGG:ath:AT1G75230
OMA:ARSLTCE Uniprot:F4HXH4
Length = 394
Score = 767 (275.1 bits), Expect = 3.9e-76, P = 3.9e-76
Identities = 152/267 (56%), Positives = 198/267 (74%)
Query: 11 ISQNPSASSKITFPPRKIRKLTTITPITKIAEIPVATAISTNSDNSPKI-FKPLTFKGEV 69
+S + AS P + ++TT P TK +++ + ++ P+I + LT +GE+
Sbjct: 83 LSPDDDASDGFN-PEHNLSQMTTTKPATK-SKLSQSRTVTV-----PRIQARSLTCEGEL 135
Query: 70 DIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVAL 129
+ AL HLR DPLLA+LID H PPTFE+ ++PFL+L +SILYQQLA KA SIYTRFVAL
Sbjct: 136 EAALHHLRSVDPLLASLIDIHPPPTFETFQTPFLALIRSILYQQLAAKAGNSIYTRFVAL 195
Query: 130 FNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFK 189
GE+ ++P+ VL ++PQQLR+IGVS RKASYL DLA KY +GILSD IV MD+ ++F
Sbjct: 196 CGGENGVVPENVLPLTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSGIVNMDEKSLFT 255
Query: 190 MLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKW 249
MLT V GIG+WSVHMFMI SLH+PDVLPV DLGVRKG+Q+L G+++LP KME++CEKW
Sbjct: 256 MLTMVNGIGSWSVHMFMINSLHRPDVLPVNDLGVRKGVQMLNGMEDLPRPSKMEQLCEKW 315
Query: 250 KPYRSVGSWYMWRLMEAKGVLPNVAKA 276
+PYRSV SWY+WRL+E+K PN A A
Sbjct: 316 RPYRSVASWYLWRLIESKNTPPNAAAA 342
>TAIR|locus:2077947 [details] [associations]
symbol:AT3G50880 species:3702 "Arabidopsis thaliana"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006284 "base-excision repair" evidence=IEA;ISS]
InterPro:IPR003265 InterPro:IPR011257 Pfam:PF00730 SMART:SM00478
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0008725 GO:GO:0006284
Gene3D:1.10.340.30 SUPFAM:SSF48150 eggNOG:COG0122 KO:K01247
Gene3D:1.10.1670.10 InterPro:IPR023170 EMBL:AL049862
HOGENOM:HOG000261908 EMBL:BT005275 EMBL:AK119087 IPI:IPI00540517
PIR:T08409 RefSeq:NP_190657.1 UniGene:At.35446
ProteinModelPortal:Q9SVL1 SMR:Q9SVL1 ProMEX:Q9SVL1
EnsemblPlants:AT3G50880.1 GeneID:824252 KEGG:ath:AT3G50880
TAIR:At3g50880 InParanoid:Q9SVL1 OMA:WTANMQL PhylomeDB:Q9SVL1
ProtClustDB:CLSN2915368 Genevestigator:Q9SVL1 Uniprot:Q9SVL1
Length = 273
Score = 755 (270.8 bits), Expect = 7.3e-75, P = 7.3e-75
Identities = 155/259 (59%), Positives = 196/259 (75%)
Query: 11 ISQNPSASSKITFPPRKIRKLTTITPITKIAEIPVATAISTNSDNSPKIFKPLTFKGEVD 70
+S+ +SS+I F PRKIRK+++ P +I + TA SP PL+ K VD
Sbjct: 28 VSEVSGSSSRIRFRPRKIRKVSS-DPSPRI----IITA-------SP----PLSTKSTVD 71
Query: 71 IALRHLRDKDPLLATLIDAHR-PPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVAL 129
IALRHL+ D LL LI H PP F+SS +PFLSLA+SILYQQLA KAAK IY RF++L
Sbjct: 72 IALRHLQSSDELLGALITTHNDPPLFDSSNTPFLSLARSILYQQLATKAAKCIYDRFISL 131
Query: 130 FNG-EDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMF 188
FNG E ++P++V+++S LR+IGVS RKASYL DLA+KY +G+LSDE I++M D +
Sbjct: 132 FNGGEAGVVPESVISLSAVDLRKIGVSGRKASYLHDLADKYNNGVLSDELILKMSDEELI 191
Query: 189 KMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEK 248
LT VKGIG W+VHMFMIFSLH+PDVLPVGDLGVRKG++ LYGLK LPG L+ME++CEK
Sbjct: 192 DRLTLVKGIGVWTVHMFMIFSLHRPDVLPVGDLGVRKGVKDLYGLKNLPGPLQMEQLCEK 251
Query: 249 WKPYRSVGSWYMWRLMEAK 267
W+PYRSVGSWYMWRL+E++
Sbjct: 252 WRPYRSVGSWYMWRLIESR 270
>ASPGD|ASPL0000073519 [details] [associations]
symbol:AN4389 species:162425 "Emericella nidulans"
[GO:0047405 "pyrimidine-5'-nucleotide nucleosidase activity"
evidence=RCA] [GO:0043173 "nucleotide salvage" evidence=RCA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0032993 "protein-DNA
complex" evidence=IEA] [GO:0008725 "DNA-3-methyladenine glycosylase
activity" evidence=IEA] [GO:0032131 "alkylated DNA binding"
evidence=IEA] [GO:0043916 "DNA-7-methylguanine glycosylase
activity" evidence=IEA] [GO:0052820 "DNA-1,N6-ethenoadenine
N-glycosylase activity" evidence=IEA] [GO:0006307 "DNA dealkylation
involved in DNA repair" evidence=IEA] [GO:0045007 "depurination"
evidence=IEA] [GO:0000725 "recombinational repair" evidence=IEA]
InterPro:IPR003265 InterPro:IPR011257 Pfam:PF00730 SMART:SM00478
GO:GO:0003824 GO:GO:0006284 Gene3D:1.10.340.30 SUPFAM:SSF48150
eggNOG:COG0122 KO:K01247 Gene3D:1.10.1670.10 InterPro:IPR023170
EMBL:BN001303 EMBL:AACD01000076 OrthoDB:EOG45HW6S
RefSeq:XP_661993.1 ProteinModelPortal:Q5B4Z2
EnsemblFungi:CADANIAT00006068 GeneID:2872182 KEGG:ani:AN4389.2
HOGENOM:HOG000188222 OMA:PHRTNAT Uniprot:Q5B4Z2
Length = 391
Score = 255 (94.8 bits), Expect = 1.8e-32, Sum P(2) = 1.8e-32
Identities = 51/129 (39%), Positives = 75/129 (58%)
Query: 138 PDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGI 197
P+ ++ V LR G+S RKA Y+ LAEK+ G LS ++ D + + LT+V+G+
Sbjct: 255 PEEIVRVDIPTLRTAGLSQRKAEYIHGLAEKFASGELSATMLLNASDEELLEKLTAVRGL 314
Query: 198 GAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLK-ELPGALKMEEVCEKWKPYRSVG 256
G WSV MF F+L + DV GDLGV++G G + +M ++ K+ PYRS+
Sbjct: 315 GRWSVEMFACFTLKRTDVFSTGDLGVQRGCAAFMGKDFKYMSEKEMLDLAAKFAPYRSLF 374
Query: 257 SWYMWRLME 265
WYMWR+ E
Sbjct: 375 MWYMWRVEE 383
Score = 118 (46.6 bits), Expect = 1.8e-32, Sum P(2) = 1.8e-32
Identities = 46/142 (32%), Positives = 66/142 (46%)
Query: 6 HTSDNISQNPSASSKITFPP---RKIR----KLTTITP--ITKIAEIPVATAISTNSDNS 56
H S+ P ++S++ PP R + T +TP + +A P AT S S +
Sbjct: 89 HNSNYWDSTPISNSRLHTPPPLDRPVEPHRTNATLLTPHGSSLVAYPPGATG-SDISPSK 147
Query: 57 PKIFKPLTFKGEV-DIALRHLRDKDPLLATLIDAHR-----PPTFESSRSPFLSLAKSIL 110
P + +P G + + A HL DP L LI AH P PF SL +I+
Sbjct: 148 PGLPRPTATTGTLLEKATAHLIATDPRLEPLIKAHHCSLFSPEGLAEKIDPFRSLVGTII 207
Query: 111 YQQLAYKAAKSIYTRFVALFNG 132
QQ++ AA+SI +FVAL G
Sbjct: 208 GQQVSGAAARSIREKFVALLWG 229
>POMBASE|SPAPB24D3.04c [details] [associations]
symbol:mag1 "DNA-3-methyladenine glycosylase Mag1"
species:4896 "Schizosaccharomyces pombe" [GO:0000725
"recombinational repair" evidence=IMP] [GO:0003684 "damaged DNA
binding" evidence=IDA] [GO:0003905 "alkylbase DNA N-glycosylase
activity" evidence=IDA] [GO:0005634 "nucleus" evidence=IC;IDA]
[GO:0006285 "base-excision repair, AP site formation" evidence=IGI]
[GO:0006307 "DNA dealkylation involved in DNA repair" evidence=IDA]
[GO:0008725 "DNA-3-methyladenine glycosylase activity"
evidence=IGI] [GO:0032131 "alkylated DNA binding" evidence=IDA]
[GO:0032993 "protein-DNA complex" evidence=IDA] [GO:0043916
"DNA-7-methylguanine glycosylase activity" evidence=IGI;IDA]
[GO:0045007 "depurination" evidence=IDA] [GO:0052820
"DNA-1,N6-ethenoadenine N-glycosylase activity" evidence=IDA]
[GO:0052821 "DNA-7-methyladenine glycosylase activity"
evidence=IEA] [GO:0052822 "DNA-3-methylguanine glycosylase
activity" evidence=IEA] InterPro:IPR000035 InterPro:IPR003265
InterPro:IPR003583 InterPro:IPR011257 Pfam:PF00730 PROSITE:PS00516
SMART:SM00278 SMART:SM00478 PomBase:SPAPB24D3.04c GO:GO:0005634
EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0008725
Gene3D:1.10.340.30 SUPFAM:SSF48150 eggNOG:COG0122 KO:K01247
GO:GO:0052822 GO:GO:0052821 GO:GO:0043916 GO:GO:0006307
Gene3D:1.10.1670.10 InterPro:IPR023170 GO:GO:0045007 GO:GO:0032993
GO:GO:0000725 EMBL:U76637 PIR:JC5177 RefSeq:NP_593991.1 PDB:3S6I
PDBsum:3S6I ProteinModelPortal:Q92383 STRING:Q92383
EnsemblFungi:SPAPB24D3.04c.1 GeneID:2543565 KEGG:spo:SPAPB24D3.04c
HOGENOM:HOG000261908 OMA:YLWRIAD OrthoDB:EOG45HW6S NextBio:20804573
GO:GO:0032131 GO:GO:0052820 Uniprot:Q92383
Length = 228
Score = 288 (106.4 bits), Expect = 2.2e-25, P = 2.2e-25
Identities = 62/199 (31%), Positives = 107/199 (53%)
Query: 68 EVDIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFV 127
+ +I L L + L L+ +RP + P+ L +++ QQL KAA +I+ RF
Sbjct: 17 KAEIHLSGLDENWKRLVKLVGNYRPNRSMEKKEPYEELIRAVASQQLHSKAANAIFNRFK 76
Query: 128 ALFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGIL-SDESIVEMDDVT 186
++ N P+ + + + +R G S RK L+ +AE G++ + E + +
Sbjct: 77 SISNNGQFPTPEEIRDMDFEIMRACGFSARKIDSLKSIAEATISGLIPTKEEAERLSNEE 136
Query: 187 MFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPG---ALKME 243
+ + LT +KGIG W+V M +IFSL++ DV+P DL +R G + L+ L ++P LK
Sbjct: 137 LIERLTQIKGIGRWTVEMLLIFSLNRDDVMPADDLSIRNGYRYLHRLPKIPTKMYVLKHS 196
Query: 244 EVCEKWKPYRSVGSWYMWR 262
E+C P+R+ +WY+W+
Sbjct: 197 EICA---PFRTAAAWYLWK 212
>UNIPROTKB|Q0BWS7 [details] [associations]
symbol:HNE_3393 "Putative DNA-3-methyladenine glycosylase"
species:228405 "Hyphomonas neptunium ATCC 15444" [GO:0003905
"alkylbase DNA N-glycosylase activity" evidence=ISS] [GO:0006281
"DNA repair" evidence=ISS] InterPro:IPR003265 InterPro:IPR003583
InterPro:IPR011257 Pfam:PF00730 SMART:SM00278 SMART:SM00478
GO:GO:0006284 Gene3D:1.10.340.30 SUPFAM:SSF48150 eggNOG:COG0122
KO:K01247 GO:GO:0003905 Gene3D:1.10.1670.10 InterPro:IPR023170
GO:GO:0003677 GO:GO:0006281 EMBL:CP000158 GenomeReviews:CP000158_GR
HOGENOM:HOG000261908 RefSeq:YP_762066.1 ProteinModelPortal:Q0BWS7
STRING:Q0BWS7 GeneID:4288503 KEGG:hne:HNE_3393 PATRIC:32219665
OMA:IVCGQQL BioCyc:HNEP228405:GI69-3395-MONOMER Uniprot:Q0BWS7
Length = 213
Score = 240 (89.5 bits), Expect = 2.7e-20, P = 2.7e-20
Identities = 63/206 (30%), Positives = 105/206 (50%)
Query: 72 ALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFN 131
A L DP LA D+ P + +S + L + I +QQL+ KAA +I+ R V +F
Sbjct: 12 ACERLALADPALARAYDSLGVPEWRTSEPGYNMLGRMISHQQLSTKAAATIWGR-VEVFL 70
Query: 132 GEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKML 191
GE + P+ +LA P LR G+S K ++L +AE G L+ + D + L
Sbjct: 71 GE--VTPETLLAADPDALRACGLSRPKVAHLTSIAEAMVTGELNLARVCAADLDSARAEL 128
Query: 192 TSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKM-EEVCEKWK 250
SV+GIG W+ +F+++++ D P+ D+G+ + + L G E K+ + E W+
Sbjct: 129 VSVRGIGPWTAELFLLYAVGAMDAFPIADVGLMEAHKQL-GRYETRMESKIFTQHAEIWR 187
Query: 251 PYRSVGSWYMWRLMEAKGVLPNVAKA 276
P+R V + +W + A+ + KA
Sbjct: 188 PHRGVAAHLLWGWLNAERARDSAPKA 213
>POMBASE|SPBC23G7.11 [details] [associations]
symbol:mag2 "DNA-3-methyladenine glycosidase Mag2"
species:4896 "Schizosaccharomyces pombe" [GO:0003905 "alkylbase DNA
N-glycosylase activity" evidence=ISO] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0006285 "base-excision repair, AP site
formation" evidence=IGI] [GO:0006307 "DNA dealkylation involved in
DNA repair" evidence=ISO] [GO:0008725 "DNA-3-methyladenine
glycosylase activity" evidence=IEA] [GO:0043916
"DNA-7-methylguanine glycosylase activity" evidence=IEA]
[GO:0052821 "DNA-7-methyladenine glycosylase activity"
evidence=IEA] [GO:0052822 "DNA-3-methylguanine glycosylase
activity" evidence=IEA] InterPro:IPR000035 InterPro:IPR003265
InterPro:IPR011257 Pfam:PF00730 PROSITE:PS00516 SMART:SM00478
PomBase:SPBC23G7.11 GO:GO:0005634 GO:GO:0008725 Gene3D:1.10.340.30
SUPFAM:SSF48150 eggNOG:COG0122 KO:K01247 GO:GO:0003905
GO:GO:0052822 GO:GO:0052821 GO:GO:0043916 GO:GO:0006307
Gene3D:1.10.1670.10 InterPro:IPR023170 EMBL:CU329671 GO:GO:0006285
HOGENOM:HOG000261908 PIR:T39957 RefSeq:NP_595869.1 PDB:4B21
PDB:4B22 PDB:4B23 PDB:4B24 PDBsum:4B21 PDBsum:4B22 PDBsum:4B23
PDBsum:4B24 ProteinModelPortal:O94468 STRING:O94468
EnsemblFungi:SPBC23G7.11.1 GeneID:2540646 KEGG:spo:SPBC23G7.11
OMA:NYTEREL OrthoDB:EOG43248C NextBio:20801770 Uniprot:O94468
Length = 213
Score = 228 (85.3 bits), Expect = 5.1e-19, P = 5.1e-19
Identities = 51/203 (25%), Positives = 103/203 (50%)
Query: 72 ALRHLRDKDPLLATLIDAHRPPTF--ESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVAL 129
A +HL D ++L+ P T +P+ + ++I Q+L+ A SI +F
Sbjct: 10 AEKHLSSIDNKWSSLVKKVGPCTLTPHPEHAPYEGIIRAITSQKLSDAATNSIINKFCTQ 69
Query: 130 FNGEDNI-LPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVE-MDDVTM 187
+ D P ++ + L E G S K+ + +AE + + +S +E M + +
Sbjct: 70 CSDNDEFPTPKQIMETDVETLHECGFSKLKSQEIHIVAEAALNKQIPSKSEIEKMSEEEL 129
Query: 188 FKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCE 247
+ L+ +KG+ W++ M+ IF+L + D++P D ++ + +GL P ++E++ +
Sbjct: 130 MESLSKIKGVKRWTIEMYSIFTLGRLDIMPADDSTLKNEAKEFFGLSSKPQTEEVEKLTK 189
Query: 248 KWKPYRSVGSWYMWRL--MEAKG 268
KPYR++ +WY+W++ + KG
Sbjct: 190 PCKPYRTIAAWYLWQIPKLHRKG 212
>CGD|CAL0000388 [details] [associations]
symbol:orf19.3639 species:5476 "Candida albicans" [GO:0005575
"cellular_component" evidence=ND] [GO:0006307 "DNA dealkylation
involved in DNA repair" evidence=IEA] [GO:0006285 "base-excision
repair, AP site formation" evidence=IEA] [GO:0003905 "alkylbase DNA
N-glycosylase activity" evidence=IEA] InterPro:IPR000035
InterPro:IPR003265 InterPro:IPR003583 InterPro:IPR011257
Pfam:PF00730 PROSITE:PS00516 SMART:SM00278 SMART:SM00478
CGD:CAL0000388 GO:GO:0006284 Gene3D:1.10.340.30 SUPFAM:SSF48150
eggNOG:COG0122 KO:K01247 GO:GO:0003905 Gene3D:1.10.1670.10
InterPro:IPR023170 GO:GO:0003677 EMBL:AACQ01000103
EMBL:AACQ01000102 RefSeq:XP_714480.1 RefSeq:XP_714528.1
ProteinModelPortal:Q59Y10 STRING:Q59Y10 GeneID:3643839
GeneID:3643897 KEGG:cal:CaO19.11121 KEGG:cal:CaO19.3639
Uniprot:Q59Y10
Length = 354
Score = 205 (77.2 bits), Expect = 7.8e-18, Sum P(2) = 7.8e-18
Identities = 52/149 (34%), Positives = 86/149 (57%)
Query: 104 SLAKSILYQQLAYKAAKSIYTRFVALFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLR 163
SL +S++ QQ++ AAK+I TRF LF+G PD L +P++L+ +G+S K Y++
Sbjct: 144 SLIRSVIAQQVSGAAAKAIQTRFEGLFDGIPT--PDKTLKFTPEELKSVGLSNMKVKYVQ 201
Query: 164 DLAEKYTDG---ILSDESIVE--MDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPV 218
++E + D + E + +DD+ + L +KGIG WS MF +F+L + DV
Sbjct: 202 SISEAFNDPNNHLTRFEFYKQSKLDDILI--ELCKLKGIGIWSAKMFAMFTLEEMDVFAE 259
Query: 219 GDLGVRKGLQVLYGLKELPGALK-MEEVC 246
DLG+ +G+ Y L + P LK +++ C
Sbjct: 260 DDLGIARGM-ARY-LNKRPELLKQIKQEC 286
Score = 47 (21.6 bits), Expect = 7.8e-18, Sum P(2) = 7.8e-18
Identities = 8/17 (47%), Positives = 12/17 (70%)
Query: 247 EKWKPYRSVGSWYMWRL 263
+++ PYRSV +WRL
Sbjct: 325 KRFSPYRSVFMMILWRL 341
>UNIPROTKB|Q59Y10 [details] [associations]
symbol:MAG1 "Putative uncharacterized protein MAG1"
species:237561 "Candida albicans SC5314" [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR000035
InterPro:IPR003265 InterPro:IPR003583 InterPro:IPR011257
Pfam:PF00730 PROSITE:PS00516 SMART:SM00278 SMART:SM00478
CGD:CAL0000388 GO:GO:0006284 Gene3D:1.10.340.30 SUPFAM:SSF48150
eggNOG:COG0122 KO:K01247 GO:GO:0003905 Gene3D:1.10.1670.10
InterPro:IPR023170 GO:GO:0003677 EMBL:AACQ01000103
EMBL:AACQ01000102 RefSeq:XP_714480.1 RefSeq:XP_714528.1
ProteinModelPortal:Q59Y10 STRING:Q59Y10 GeneID:3643839
GeneID:3643897 KEGG:cal:CaO19.11121 KEGG:cal:CaO19.3639
Uniprot:Q59Y10
Length = 354
Score = 205 (77.2 bits), Expect = 7.8e-18, Sum P(2) = 7.8e-18
Identities = 52/149 (34%), Positives = 86/149 (57%)
Query: 104 SLAKSILYQQLAYKAAKSIYTRFVALFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLR 163
SL +S++ QQ++ AAK+I TRF LF+G PD L +P++L+ +G+S K Y++
Sbjct: 144 SLIRSVIAQQVSGAAAKAIQTRFEGLFDGIPT--PDKTLKFTPEELKSVGLSNMKVKYVQ 201
Query: 164 DLAEKYTDG---ILSDESIVE--MDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPV 218
++E + D + E + +DD+ + L +KGIG WS MF +F+L + DV
Sbjct: 202 SISEAFNDPNNHLTRFEFYKQSKLDDILI--ELCKLKGIGIWSAKMFAMFTLEEMDVFAE 259
Query: 219 GDLGVRKGLQVLYGLKELPGALK-MEEVC 246
DLG+ +G+ Y L + P LK +++ C
Sbjct: 260 DDLGIARGM-ARY-LNKRPELLKQIKQEC 286
Score = 47 (21.6 bits), Expect = 7.8e-18, Sum P(2) = 7.8e-18
Identities = 8/17 (47%), Positives = 12/17 (70%)
Query: 247 EKWKPYRSVGSWYMWRL 263
+++ PYRSV +WRL
Sbjct: 325 KRFSPYRSVFMMILWRL 341
>SGD|S000000944 [details] [associations]
symbol:MAG1 "3-methyl-adenine DNA glycosylase" species:4932
"Saccharomyces cerevisiae" [GO:0005634 "nucleus" evidence=IEA;IC]
[GO:0003905 "alkylbase DNA N-glycosylase activity"
evidence=IEA;IDA] [GO:0006284 "base-excision repair" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0003824 "catalytic
activity" evidence=IEA] [GO:0052822 "DNA-3-methylguanine
glycosylase activity" evidence=IEA] [GO:0006307 "DNA dealkylation
involved in DNA repair" evidence=IGI;IEP;ISS] [GO:0006285
"base-excision repair, AP site formation" evidence=IGI;IMP]
[GO:0006974 "response to DNA damage stimulus" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0008725 "DNA-3-methyladenine glycosylase
activity" evidence=IEA] [GO:0043916 "DNA-7-methylguanine
glycosylase activity" evidence=IEA] [GO:0052821
"DNA-7-methyladenine glycosylase activity" evidence=IEA]
InterPro:IPR000035 InterPro:IPR003265 InterPro:IPR003583
InterPro:IPR011257 Pfam:PF00730 PROSITE:PS00516 SMART:SM00278
SMART:SM00478 SGD:S000000944 GO:GO:0005634 GO:GO:0008725
Gene3D:1.10.340.30 SUPFAM:SSF48150 eggNOG:COG0122 KO:K01247
GO:GO:0003905 GO:GO:0052822 GO:GO:0052821 GO:GO:0043916
GO:GO:0006307 Gene3D:1.10.1670.10 InterPro:IPR023170 GO:GO:0003677
EMBL:BK006939 EMBL:U18917 GO:GO:0006285 OrthoDB:EOG45HW6S
EMBL:X56662 EMBL:X57781 EMBL:AY692938 PIR:S12498 RefSeq:NP_011069.1
ProteinModelPortal:P22134 SMR:P22134 DIP:DIP-6599N IntAct:P22134
MINT:MINT-675790 STRING:P22134 EnsemblFungi:YER142C GeneID:856885
KEGG:sce:YER142C CYGD:YER142c HOGENOM:HOG000113466 OMA:WSAKMFA
NextBio:983278 Genevestigator:P22134 GermOnline:YER142C
Uniprot:P22134
Length = 296
Score = 195 (73.7 bits), Expect = 8.0e-18, Sum P(2) = 8.0e-18
Identities = 65/211 (30%), Positives = 106/211 (50%)
Query: 70 DIALRHLRDKDPLLATLIDAHRPPTF-ESSRSP------FLSLAKSILYQQLAYKAAKSI 122
++A H+ +KDP L ++ + + + ++ P F+ LA +IL QQ++ +AA+SI
Sbjct: 45 NMACEHILEKDPSLFPILKNNEFTLYLKETQVPNTLEDYFIRLASTILSQQISGQAAESI 104
Query: 123 YTRFVALFNGEDNILPDAVLAVS----PQQLREI---GVSYRKASYLRDLAEKYTDGILS 175
R V+L+ G PD + P + EI G+S RK YL LA +T+
Sbjct: 105 KARVVSLYGGA---FPDYKILFEDFKDPAKCAEIAKCGLSKRKMIYLESLAVYFTEKYKD 161
Query: 176 DESIV---EMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGL-QVLY 231
E + + D+ + ++T+VKGIG WS MF+I L + DV DLG+ +G + L
Sbjct: 162 IEKLFGQKDNDEEVIESLVTNVKGIGPWSAKMFLISGLKRMDVFAPEDLGIARGFSKYLS 221
Query: 232 GLKELPGALKME-EVCEKWKPYRSVGSWYMW 261
EL L E +V +K K +W ++
Sbjct: 222 DKPELEKELMRERKVVKKSKIKHKKYNWKIY 252
Score = 59 (25.8 bits), Expect = 8.0e-18, Sum P(2) = 8.0e-18
Identities = 11/22 (50%), Positives = 15/22 (68%)
Query: 242 MEEVCEKWKPYRSVGSWYMWRL 263
ME+ E + PYRSV + +WRL
Sbjct: 257 MEKCSETFSPYRSVFMFILWRL 278
>UNIPROTKB|Q5LRK0 [details] [associations]
symbol:SPO2127 "DNA-3-methyladenine glycosylase II,
putative" species:246200 "Ruegeria pomeroyi DSS-3" [GO:0003905
"alkylbase DNA N-glycosylase activity" evidence=ISS] [GO:0006281
"DNA repair" evidence=ISS] InterPro:IPR003265 InterPro:IPR011257
Pfam:PF00730 SMART:SM00478 EMBL:CP000031 GenomeReviews:CP000031_GR
GO:GO:0006284 Gene3D:1.10.340.30 SUPFAM:SSF48150 KO:K01247
GO:GO:0003905 Gene3D:1.10.1670.10 InterPro:IPR023170 GO:GO:0006281
HOGENOM:HOG000261908 OMA:IVCGQQL RefSeq:YP_167355.1
ProteinModelPortal:Q5LRK0 GeneID:3193412 KEGG:sil:SPO2127
PATRIC:23377597 ProtClustDB:CLSK933770 Uniprot:Q5LRK0
Length = 210
Score = 205 (77.2 bits), Expect = 1.4e-16, P = 1.4e-16
Identities = 56/186 (30%), Positives = 88/186 (47%)
Query: 76 LRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDN 135
L + P +A + P F L +I+ QQ++ +A +I+ R A G
Sbjct: 20 LAESCPRMAHAMTLTGPLPLRRRPDGFAELLSAIVSQQVSVASANAIWARMRAA--GL-- 75
Query: 136 ILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVK 195
I P +L S LR G+S +K Y R+LA+ D + D + LT V
Sbjct: 76 IGPRKILWASDDDLRAAGLSRQKIRYARELAKARIDF----NGLRAAPDADVVAELTRVP 131
Query: 196 GIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSV 255
GIG W+ ++ +FSL + DV GDL +++ +VLY L E P + ++ W P+RSV
Sbjct: 132 GIGVWTAEIYAMFSLGRADVFAPGDLALQEAARVLYELPERPSERALRQMALAWSPWRSV 191
Query: 256 GSWYMW 261
+ +W
Sbjct: 192 AARVLW 197
>TIGR_CMR|SPO_2127 [details] [associations]
symbol:SPO_2127 "DNA-3-methyladenine glycosylase II,
putative" species:246200 "Ruegeria pomeroyi DSS-3" [GO:0003905
"alkylbase DNA N-glycosylase activity" evidence=ISS] [GO:0006281
"DNA repair" evidence=ISS] InterPro:IPR003265 InterPro:IPR011257
Pfam:PF00730 SMART:SM00478 EMBL:CP000031 GenomeReviews:CP000031_GR
GO:GO:0006284 Gene3D:1.10.340.30 SUPFAM:SSF48150 KO:K01247
GO:GO:0003905 Gene3D:1.10.1670.10 InterPro:IPR023170 GO:GO:0006281
HOGENOM:HOG000261908 OMA:IVCGQQL RefSeq:YP_167355.1
ProteinModelPortal:Q5LRK0 GeneID:3193412 KEGG:sil:SPO2127
PATRIC:23377597 ProtClustDB:CLSK933770 Uniprot:Q5LRK0
Length = 210
Score = 205 (77.2 bits), Expect = 1.4e-16, P = 1.4e-16
Identities = 56/186 (30%), Positives = 88/186 (47%)
Query: 76 LRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDN 135
L + P +A + P F L +I+ QQ++ +A +I+ R A G
Sbjct: 20 LAESCPRMAHAMTLTGPLPLRRRPDGFAELLSAIVSQQVSVASANAIWARMRAA--GL-- 75
Query: 136 ILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVK 195
I P +L S LR G+S +K Y R+LA+ D + D + LT V
Sbjct: 76 IGPRKILWASDDDLRAAGLSRQKIRYARELAKARIDF----NGLRAAPDADVVAELTRVP 131
Query: 196 GIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSV 255
GIG W+ ++ +FSL + DV GDL +++ +VLY L E P + ++ W P+RSV
Sbjct: 132 GIGVWTAEIYAMFSLGRADVFAPGDLALQEAARVLYELPERPSERALRQMALAWSPWRSV 191
Query: 256 GSWYMW 261
+ +W
Sbjct: 192 AARVLW 197
>TIGR_CMR|BA_3871 [details] [associations]
symbol:BA_3871 "DNA-3-methyladenine glycosidase"
species:198094 "Bacillus anthracis str. Ames" [GO:0006281 "DNA
repair" evidence=ISS] [GO:0008725 "DNA-3-methyladenine glycosylase
activity" evidence=ISS] InterPro:IPR000035 InterPro:IPR003265
InterPro:IPR011257 InterPro:IPR012904 Pfam:PF00730 Pfam:PF07934
PROSITE:PS00516 SMART:SM00478 GO:GO:0008725 GO:GO:0006284
Gene3D:1.10.340.30 SUPFAM:SSF48150 KO:K01247 GO:GO:0052822
GO:GO:0052821 GO:GO:0043916 Gene3D:1.10.1670.10 InterPro:IPR023170
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0003684
GO:GO:0006289 GO:GO:0008534 RefSeq:NP_846120.1 RefSeq:YP_020511.1
RefSeq:YP_029840.1 ProteinModelPortal:Q81WU5 DNASU:1088762
EnsemblBacteria:EBBACT00000011095 EnsemblBacteria:EBBACT00000014910
EnsemblBacteria:EBBACT00000023602 GeneID:1088762 GeneID:2815196
GeneID:2852868 KEGG:ban:BA_3871 KEGG:bar:GBAA_3871 KEGG:bat:BAS3587
HOGENOM:HOG000221909 OMA:FEALCWG ProtClustDB:CLSK886592
BioCyc:BANT260799:GJAJ-3646-MONOMER
BioCyc:BANT261594:GJ7F-3762-MONOMER Uniprot:Q81WU5
Length = 303
Score = 199 (75.1 bits), Expect = 8.4e-15, P = 8.4e-15
Identities = 48/173 (27%), Positives = 91/173 (52%)
Query: 102 FLSLAKSILYQQLAYKAAKSIYTRFVALFNG--EDN-----ILP--DAVLAVSPQQLREI 152
F +L+ I+ QQ+ A ++ R V F E N I P + + + + L+ +
Sbjct: 130 FEALSWGIIGQQINLTYAYTLKRRLVETFGSYVEWNDRKHWIFPSPETIANLHVEDLKNL 189
Query: 153 GVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMF-KMLTSVKGIGAWSVHMFMIFSLH 211
++ RK YL +A+ T+G LS ES++++ DV K LT++ GIG W+ + ++ L
Sbjct: 190 KMTTRKCEYLIGIAKLITEGNLSKESLLQIQDVKQAEKRLTAIHGIGPWTANYVLMRCLR 249
Query: 212 KPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSWYMWRLM 264
P P+ D+G+ ++ L G + P ++++ WK + S ++Y+WR++
Sbjct: 250 FPSAFPIDDVGLHNAIKYLTGSESKPTKHEIKDFAVNWKNWESYATFYLWRVL 302
>UNIPROTKB|Q10630 [details] [associations]
symbol:alkA "Probable bifunctional transcriptional
activator/DNA repair enzyme AlkA" species:1773 "Mycobacterium
tuberculosis" [GO:0005618 "cell wall" evidence=IDA] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0006307 "DNA dealkylation
involved in DNA repair" evidence=IDA] [GO:0051409 "response to
nitrosative stress" evidence=IDA] InterPro:IPR003265
InterPro:IPR003583 InterPro:IPR004026 InterPro:IPR009057
InterPro:IPR011257 InterPro:IPR018060 InterPro:IPR018062
Pfam:PF00730 Pfam:PF02805 Pfam:PF12833 PROSITE:PS00041
PROSITE:PS01124 SMART:SM00278 SMART:SM00342 SMART:SM00478
GO:GO:0005886 GO:GO:0005618 EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR GO:GO:0008725 GO:GO:0046872 GO:GO:0006284
Gene3D:1.10.340.30 SUPFAM:SSF48150 eggNOG:COG0122 GO:GO:0052822
GO:GO:0052821 GO:GO:0043916 GO:GO:0006307 Gene3D:1.10.1670.10
Gene3D:3.30.310.20 InterPro:IPR010316 InterPro:IPR023170
Pfam:PF06029 SMART:SM01009 EMBL:BX842576 GO:GO:0043565
GO:GO:0008270 GO:GO:0003700 GO:GO:0006351 GO:GO:0005622
Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:3.40.10.10 SUPFAM:SSF57884
GO:GO:0051409 GO:GO:0008168 EMBL:U65786 PIR:A70769
RefSeq:NP_215833.1 RefSeq:NP_335806.1 RefSeq:YP_006514694.1
ProteinModelPortal:Q10630 SMR:Q10630
EnsemblBacteria:EBMYCT00000003926 EnsemblBacteria:EBMYCT00000071713
GeneID:13319902 GeneID:886916 GeneID:924701 KEGG:mtc:MT1358
KEGG:mtu:Rv1317c KEGG:mtv:RVBD_1317c PATRIC:18124756
TubercuList:Rv1317c HOGENOM:HOG000129321 KO:K13529 OMA:RCRPDSA
ProtClustDB:CLSK791096 Uniprot:Q10630
Length = 496
Score = 138 (53.6 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 45/165 (27%), Positives = 77/165 (46%)
Query: 107 KSILYQQLAYKAAKSIYTRFVALFNGEDNILPDAVLAVSP--QQLREIGVSYRKASYLRD 164
+++L QQ++ KAA + R VA + + A+ P +QL EI + R
Sbjct: 323 RAVLAQQVSTKAASTHAGRLVAAYGRPVHDRHGALTHTFPSIEQLAEIDPGHLAVPKARQ 382
Query: 165 LAEKYTDGILSDESIVEMD---DVTMFK-MLTSVKGIGAWSVHMFMIFSLHKPDVLPVGD 220
L+D+S+V +D D + L ++ G+G W+ + + L PD P D
Sbjct: 383 RTINALVASLADKSLV-LDAGCDWQRARGQLLALPGVGPWTAEVIAMRGLGDPDAFPASD 441
Query: 221 LGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSWYMWRLME 265
LG+R + L GL AL + +W+P+RS + ++W +E
Sbjct: 442 LGLRLAAKKL-GLPAQRRALTVHSA--RWRPWRSYATQHLWTTLE 483
>UNIPROTKB|P04395 [details] [associations]
symbol:alkA species:83333 "Escherichia coli K-12"
[GO:0006284 "base-excision repair" evidence=IEA;IDA] [GO:0006281
"DNA repair" evidence=IDA] [GO:0003905 "alkylbase DNA N-glycosylase
activity" evidence=IEA;IDA] [GO:0006974 "response to DNA damage
stimulus" evidence=IMP] [GO:0006307 "DNA dealkylation involved in
DNA repair" evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0052822 "DNA-3-methylguanine glycosylase activity"
evidence=IEA] [GO:0052821 "DNA-7-methyladenine glycosylase
activity" evidence=IEA] [GO:0043916 "DNA-7-methylguanine
glycosylase activity" evidence=IEA] [GO:0008725
"DNA-3-methyladenine glycosylase activity" evidence=IEA]
InterPro:IPR000035 InterPro:IPR003265 InterPro:IPR011257
Pfam:PF00730 PROSITE:PS00516 SMART:SM00478 ECOGENE:EG11222
GO:GO:0005737 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0008725 GO:GO:0006284
Gene3D:1.10.340.30 SUPFAM:SSF48150 EMBL:K02498 EMBL:M13827
PIR:A00904 RefSeq:NP_416572.1 RefSeq:YP_490310.1 PDB:1DIZ PDB:1MPG
PDB:1PVS PDB:3CVS PDB:3CVT PDB:3CW7 PDB:3CWA PDB:3CWS PDB:3CWT
PDB:3CWU PDB:3D4V PDB:3OGD PDB:3OH6 PDB:3OH9 PDBsum:1DIZ
PDBsum:1MPG PDBsum:1PVS PDBsum:3CVS PDBsum:3CVT PDBsum:3CW7
PDBsum:3CWA PDBsum:3CWS PDBsum:3CWT PDBsum:3CWU PDBsum:3D4V
PDBsum:3OGD PDBsum:3OH6 PDBsum:3OH9 ProteinModelPortal:P04395
SMR:P04395 DIP:DIP-9084N IntAct:P04395 MINT:MINT-1227621
EnsemblBacteria:EBESCT00000001174 EnsemblBacteria:EBESCT00000016906
GeneID:12930687 GeneID:947371 KEGG:ecj:Y75_p2031 KEGG:eco:b2068
PATRIC:32119469 EchoBASE:EB1204 eggNOG:COG0122 HOGENOM:HOG000221908
KO:K01247 OMA:LHIWYTD ProtClustDB:PRK10308
BioCyc:EcoCyc:EG11222-MONOMER BioCyc:ECOL316407:JW2053-MONOMER
BioCyc:MetaCyc:EG11222-MONOMER EvolutionaryTrace:P04395
Genevestigator:P04395 GO:GO:0003905 GO:GO:0052822 GO:GO:0052821
GO:GO:0043916 GO:GO:0006307 Gene3D:1.10.1670.10 Gene3D:3.30.310.20
InterPro:IPR010316 InterPro:IPR023170 Pfam:PF06029 SMART:SM01009
Uniprot:P04395
Length = 282
Score = 111 (44.1 bits), Expect = 0.00067, P = 0.00067
Identities = 33/124 (26%), Positives = 54/124 (43%)
Query: 138 PDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGI 197
P + A PQ L+ +G+ ++A L LA +G L + D K L + GI
Sbjct: 158 PQRLAAADPQALKALGMPLKRAEALIHLANAALEGTLP--MTIPGDVEQAMKTLQTFPGI 215
Query: 198 GAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGS 257
G W+ + F + DV D ++ Q G+ P ++ E+WKP+RS
Sbjct: 216 GRWTANYFALRGWQAKDVFLPDDYLIK---QRFPGMT--PAQIR--RYAERWKPWRSYAL 268
Query: 258 WYMW 261
++W
Sbjct: 269 LHIW 272
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.133 0.386 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 284 284 0.00085 115 3 11 22 0.38 34
33 0.42 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 15
No. of states in DFA: 606 (64 KB)
Total size of DFA: 194 KB (2110 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 22.59u 0.12s 22.71t Elapsed: 00:00:01
Total cpu time: 22.60u 0.12s 22.72t Elapsed: 00:00:01
Start: Sat May 11 12:30:10 2013 End: Sat May 11 12:30:11 2013