BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 039703
(284 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|225430742|ref|XP_002266618.1| PREDICTED: DNA-3-methyladenine glycosylase 1 [Vitis vinifera]
gi|297735147|emb|CBI17509.3| unnamed protein product [Vitis vinifera]
Length = 329
Score = 354 bits (909), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 176/278 (63%), Positives = 212/278 (76%), Gaps = 17/278 (6%)
Query: 7 TSDNISQNPSASSKITFPPRKIRKLTTITPITKIAEIPVATAISTNSDNSPKIFKPLTFK 66
T+D+IS S+SSK+ F RKIRK+++ AT ++ + P PL+ +
Sbjct: 33 TADDISLQASSSSKLPFRSRKIRKISS-----------AATPSGSDGKSEP----PLSCE 77
Query: 67 GEVDIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRF 126
GE+D+ALRHL DPLLA LI+ H+PPTF+S PFL+LAKSILYQQLAYKAA SIYTRF
Sbjct: 78 GELDVALRHLTKSDPLLAALINTHQPPTFDSCHPPFLALAKSILYQQLAYKAATSIYTRF 137
Query: 127 VALFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVT 186
VAL GE ++PDAVLA+SP QLR+IGVS RKA YL DLA KY GILSD SI+ MDD +
Sbjct: 138 VALCGGEAGVVPDAVLALSPSQLRQIGVSGRKAGYLHDLASKYKTGILSDSSIMGMDDKS 197
Query: 187 MFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVC 246
+F MLT VKGIG+WSVHMFMIFSLH+PDVLPVGD+GVRKG+Q LYGL+ELP +ME++C
Sbjct: 198 LFTMLTMVKGIGSWSVHMFMIFSLHRPDVLPVGDVGVRKGVQFLYGLEELPRPSQMEQLC 257
Query: 247 EKWKPYRSVGSWYMWRLMEAKGVLPNVAKAAVTSVEAA 284
EKWKPYRSVGSWYMWR +EAKG P A+AAV V+ A
Sbjct: 258 EKWKPYRSVGSWYMWRFVEAKGAPP--ARAAVALVDGA 293
>gi|147792215|emb|CAN72984.1| hypothetical protein VITISV_009035 [Vitis vinifera]
Length = 353
Score = 352 bits (903), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 182/292 (62%), Positives = 218/292 (74%), Gaps = 17/292 (5%)
Query: 8 SDNISQNPSASSKITFPPRKIRKLTTI-TPITKIAEI-PVAT---------AISTNSDNS 56
+D+IS S+SSK+ F RKIRK+++ TP + PV+ A N+ S
Sbjct: 34 ADDISLQASSSSKLPFRSRKIRKISSAATPSGSDGKSEPVSEDDLLKGGNRAWKRNAAQS 93
Query: 57 ----PKIFKPLTFKGEVDIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQ 112
P I KPL+ +GE+D+ALRHL DPLLA LI+ H+PPTF+S PFL+LAKSILYQ
Sbjct: 94 TAALPTIVKPLSCEGELDVALRHLTKSDPLLAALINTHQPPTFDSCHPPFLALAKSILYQ 153
Query: 113 QLAYKAAKSIYTRFVALFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDG 172
QLAYKAA SIYTRFVAL GE ++PDAVLA+SP QLR+IGVS RKA YL DLA KY G
Sbjct: 154 QLAYKAATSIYTRFVALCGGEAGVVPDAVLALSPSQLRQIGVSGRKAGYLHDLASKYKTG 213
Query: 173 ILSDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYG 232
ILSD SI+ MDD ++F MLT VKGIG+WSVHMFMIFSLH+PDVLPVGD+GVRKG+Q LYG
Sbjct: 214 ILSDSSIMGMDDKSLFTMLTMVKGIGSWSVHMFMIFSLHRPDVLPVGDVGVRKGVQFLYG 273
Query: 233 LKELPGALKMEEVCEKWKPYRSVGSWYMWRLMEAKGVLPNVAKAAVTSVEAA 284
L+ELP +ME++CEKWKPYRSVGSWYMWR +EAKG P A+AAV V+ A
Sbjct: 274 LEELPRPSQMEQLCEKWKPYRSVGSWYMWRFVEAKGAPP--ARAAVALVDGA 323
>gi|255561124|ref|XP_002521574.1| DNA-3-methyladenine glycosylase, putative [Ricinus communis]
gi|223539252|gb|EEF40845.1| DNA-3-methyladenine glycosylase, putative [Ricinus communis]
Length = 280
Score = 327 bits (839), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 161/258 (62%), Positives = 197/258 (76%), Gaps = 13/258 (5%)
Query: 19 SKITFPPRKIRKLTTITPITKIAEIPVATAISTNSDNSPKIFKPLTFKGEVDIALRHLRD 78
+KI F PRKIRKL+ I +TA +T + ++ K+ L+ KGE+D+AL HLR+
Sbjct: 36 TKIPFRPRKIRKLS----------IHTSTANNTEASSAGKL---LSAKGEIDLALEHLRN 82
Query: 79 KDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNILP 138
+PLLA LI+ H+ P FES+ PFLSL++SILYQQLA AAKSIYTRF+ L GE +LP
Sbjct: 83 SEPLLAALINTHKHPIFESNTPPFLSLSRSILYQQLALNAAKSIYTRFLTLCGGESGVLP 142
Query: 139 DAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIG 198
+ VL++S QQLREIG+S RKASYL DLA+KY +G LSD SI+EM D + LT+VKGIG
Sbjct: 143 ENVLSLSVQQLREIGISGRKASYLHDLADKYRNGSLSDSSILEMSDDMLLTSLTAVKGIG 202
Query: 199 AWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSW 258
WSVHMFMIFSLH+PDVLPVGDLGVRKG+Q LYGLKELP ME++CEKW+PYRSVGSW
Sbjct: 203 VWSVHMFMIFSLHRPDVLPVGDLGVRKGVQSLYGLKELPQPSLMEQLCEKWRPYRSVGSW 262
Query: 259 YMWRLMEAKGVLPNVAKA 276
YMWRLMEAK + AK+
Sbjct: 263 YMWRLMEAKTLAKATAKS 280
>gi|302142502|emb|CBI19705.3| unnamed protein product [Vitis vinifera]
Length = 351
Score = 327 bits (837), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 160/265 (60%), Positives = 193/265 (72%), Gaps = 17/265 (6%)
Query: 13 QNPSASSKITFPPRKIRKLTTITPITKIAEIPVATAISTNSDNSPKIFKPLTFKGEVDIA 72
+N S++S I F PRKIRK I+P NS++ P KGE++IA
Sbjct: 79 ENQSSASNIPFRPRKIRK---ISP--------------DNSESKPAGDSKTAGKGEIEIA 121
Query: 73 LRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNG 132
LRHLR+ DP LA LID H PPTF+S +PFL+L KSILYQQLAYKA SIYTRFV L G
Sbjct: 122 LRHLRNADPHLAPLIDLHPPPTFDSFHTPFLALTKSILYQQLAYKAGTSIYTRFVGLCGG 181
Query: 133 EDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLT 192
E +LP+ VLA++P QLR+IGVS RKASYL DLA KY +GILSD I+ MDD ++F MLT
Sbjct: 182 EAGVLPETVLALTPHQLRQIGVSGRKASYLHDLARKYQNGILSDTGIITMDDKSLFTMLT 241
Query: 193 SVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPY 252
V GIG+WSVHMFMIFSLH+PDVLPV DLGVRKG+Q+LYGL+ELP +ME++CEKW+PY
Sbjct: 242 MVNGIGSWSVHMFMIFSLHRPDVLPVNDLGVRKGVQLLYGLEELPRPSQMEQLCEKWRPY 301
Query: 253 RSVGSWYMWRLMEAKGVLPNVAKAA 277
RSV SWY+WR +E KG + A A
Sbjct: 302 RSVASWYIWRFVEGKGAPSSAAAVA 326
>gi|225458267|ref|XP_002282344.1| PREDICTED: DNA-3-methyladenine glycosylase 1-like [Vitis vinifera]
Length = 363
Score = 326 bits (835), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 158/273 (57%), Positives = 197/273 (72%), Gaps = 8/273 (2%)
Query: 13 QNPSASSKITFPPRKIRKLTTITPITKIAEIPVATAISTNSDNSPK--------IFKPLT 64
+N S++S I F PRKIRK++ +K A + P+ + + L+
Sbjct: 47 ENQSSASNIPFRPRKIRKISPDNSESKPAGDSKTAGKGAKNKLVPQRVPAVPNMVARALS 106
Query: 65 FKGEVDIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYT 124
+GE++IALRHLR+ DP LA LID H PPTF+S +PFL+L KSILYQQLAYKA SIYT
Sbjct: 107 CEGEIEIALRHLRNADPHLAPLIDLHPPPTFDSFHTPFLALTKSILYQQLAYKAGTSIYT 166
Query: 125 RFVALFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDD 184
RFV L GE +LP+ VLA++P QLR+IGVS RKASYL DLA KY +GILSD I+ MDD
Sbjct: 167 RFVGLCGGEAGVLPETVLALTPHQLRQIGVSGRKASYLHDLARKYQNGILSDTGIITMDD 226
Query: 185 VTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEE 244
++F MLT V GIG+WSVHMFMIFSLH+PDVLPV DLGVRKG+Q+LYGL+ELP +ME+
Sbjct: 227 KSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPVNDLGVRKGVQLLYGLEELPRPSQMEQ 286
Query: 245 VCEKWKPYRSVGSWYMWRLMEAKGVLPNVAKAA 277
+CEKW+PYRSV SWY+WR +E KG + A A
Sbjct: 287 LCEKWRPYRSVASWYIWRFVEGKGAPSSAAAVA 319
>gi|356510199|ref|XP_003523827.1| PREDICTED: probable DNA-3-methyladenine glycosylase 2-like [Glycine
max]
Length = 374
Score = 320 bits (821), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 156/278 (56%), Positives = 202/278 (72%), Gaps = 15/278 (5%)
Query: 16 SASSKITFPPRKIRKLTTITPITKIAEIPVATAISTNSDNSPKIFKP------------- 62
S ++KI PRKIRK++ P T ++ T N+ K P
Sbjct: 45 SPATKIPLRPRKIRKVSP-DPSTSESQTETPKPAKTGGRNTTKAAPPRALTVVPRIVARS 103
Query: 63 LTFKGEVDIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSI 122
L+ GEV+IALR+LR+ DP+L+ LID H+PPTF++ +PFL+L +SILYQQLAYKA SI
Sbjct: 104 LSCDGEVEIALRYLRNADPVLSPLIDIHQPPTFDNFHTPFLALTRSILYQQLAYKAGTSI 163
Query: 123 YTRFVALFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEM 182
YTRF+AL GE+ ++P+ VLA++PQQLR+IGVS RKASYL DLA KY +GILSD +IV M
Sbjct: 164 YTRFIALCGGENGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNM 223
Query: 183 DDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKM 242
DD ++F MLT V GIG+WSVHMFMIFSLH+PDVLP+ DLGVRKG+Q+LY L++LP +M
Sbjct: 224 DDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYNLEDLPRPSQM 283
Query: 243 EEVCEKWKPYRSVGSWYMWRLMEAKGVLPNVAKAAVTS 280
+++C+KW+PYRSV SWYMWR +EAKG P+ A A T
Sbjct: 284 DQLCDKWRPYRSVASWYMWRFVEAKGT-PSSAVAVATG 320
>gi|356518850|ref|XP_003528090.1| PREDICTED: DNA-3-methyladenine glycosylase 1-like [Glycine max]
Length = 351
Score = 319 bits (817), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 152/275 (55%), Positives = 201/275 (73%), Gaps = 17/275 (6%)
Query: 9 DNISQ-NPSASSKITFPPRKIRKLTTITPITKIAEIPVATAISTNSDNSPKIFKP----- 62
+N+ Q S ++KI PRKIRK ++P +E P+ A + + K P
Sbjct: 25 NNVPQPTTSPATKIPLRPRKIRK---VSPDPSTSEAPIKPAKPVGRNTTSKAAPPRALTV 81
Query: 63 --------LTFKGEVDIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQL 114
L+ GEV+I+LR+LR+ DPLL+ LID H+PPTF++ +PFL+L +SILYQQL
Sbjct: 82 VPRIVARSLSCDGEVEISLRYLRNADPLLSPLIDIHQPPTFDNFHTPFLALTRSILYQQL 141
Query: 115 AYKAAKSIYTRFVALFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGIL 174
A+KA SIYTRF+ L GE+ ++P+ VLA++PQQLR+IGVS RKASYL DLA KY +GIL
Sbjct: 142 AFKAGTSIYTRFIGLCGGENGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGIL 201
Query: 175 SDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLK 234
SD +IV MDD ++F MLT V GIG+WSVHMFMIFSLH+PDVLP+ DLGVRKG+Q+LY L+
Sbjct: 202 SDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYNLE 261
Query: 235 ELPGALKMEEVCEKWKPYRSVGSWYMWRLMEAKGV 269
+LP +M+++C+KW+PYRSV SWYMWR +EAKG
Sbjct: 262 DLPRPSQMDQLCDKWRPYRSVASWYMWRFVEAKGT 296
>gi|255644446|gb|ACU22727.1| unknown [Glycine max]
Length = 351
Score = 318 bits (816), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 152/274 (55%), Positives = 201/274 (73%), Gaps = 17/274 (6%)
Query: 9 DNISQ-NPSASSKITFPPRKIRKLTTITPITKIAEIPVATAISTNSDNSPKIFKP----- 62
+N+ Q S ++KI PRKIRK ++P +E P+ A + + K P
Sbjct: 25 NNVPQPTTSPATKIPLRPRKIRK---VSPDPSTSEAPIKPAKPVGRNTTSKAAPPRALTV 81
Query: 63 --------LTFKGEVDIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQL 114
L+ GEV+I+LR+LR+ DPLL+ LID H+PPTF++ +PFL+L +SILYQQL
Sbjct: 82 VPRIVARSLSCDGEVEISLRYLRNADPLLSPLIDIHQPPTFDNFHTPFLALTRSILYQQL 141
Query: 115 AYKAAKSIYTRFVALFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGIL 174
A+KA SIYTRF+ L GE+ ++P+ VLA++PQQLR+IGVS RKASYL DLA KY +GIL
Sbjct: 142 AFKAGTSIYTRFIGLCGGENGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGIL 201
Query: 175 SDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLK 234
SD +IV MDD ++F MLT V GIG+WSVHMFMIFSLH+PDVLP+ DLGVRKG+Q+LY L+
Sbjct: 202 SDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYNLE 261
Query: 235 ELPGALKMEEVCEKWKPYRSVGSWYMWRLMEAKG 268
+LP +M+++C+KW+PYRSV SWYMWR +EAKG
Sbjct: 262 DLPRPSQMDQLCDKWRPYRSVASWYMWRFVEAKG 295
>gi|255538662|ref|XP_002510396.1| DNA-3-methyladenine glycosylase, putative [Ricinus communis]
gi|223551097|gb|EEF52583.1| DNA-3-methyladenine glycosylase, putative [Ricinus communis]
Length = 369
Score = 317 bits (812), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 153/273 (56%), Positives = 202/273 (73%), Gaps = 13/273 (4%)
Query: 14 NPSASSKITFPPRKIRKLTTITPITKIAEI------PVATAISTNSDNSPKIF-KPLTFK 66
P+A+ PP + RKL ++P + P A A++ P+I + L+ +
Sbjct: 69 QPTATPPAKIPPSRPRKLRKLSPESAAKSTKTKTPQPRALAVA-----PPRIIARSLSCE 123
Query: 67 GEVDIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRF 126
GEV+ A+RHLR+ DPLL++LID H PPTF++ +PFL+L +SILYQQLA+KA SIYTRF
Sbjct: 124 GEVENAIRHLREADPLLSSLIDLHPPPTFDTFHTPFLALTRSILYQQLAFKAGTSIYTRF 183
Query: 127 VALFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVT 186
++L GE ++PD VLA++PQQLR+IGVS RKASYL DLA KY +GILSD +IV MDD +
Sbjct: 184 ISLCGGEAGVVPDTVLALTPQQLRQIGVSGRKASYLHDLARKYHNGILSDSAIVNMDDKS 243
Query: 187 MFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVC 246
+F MLT V GIG+WSVHMFMIFSLH+PDVLP+ DLGVRKG+Q+LY L++LP +M+++C
Sbjct: 244 LFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYNLEDLPRPSQMDQLC 303
Query: 247 EKWKPYRSVGSWYMWRLMEAKGVLPNVAKAAVT 279
EKW+PYRSV SWY+WR +EAKG P+ A A T
Sbjct: 304 EKWRPYRSVASWYLWRFVEAKGS-PSSAVAVAT 335
>gi|224066215|ref|XP_002302029.1| predicted protein [Populus trichocarpa]
gi|222843755|gb|EEE81302.1| predicted protein [Populus trichocarpa]
Length = 381
Score = 317 bits (811), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 163/290 (56%), Positives = 202/290 (69%), Gaps = 26/290 (8%)
Query: 16 SASSKITFPPRKIRKLT--------------TITPITKIAEIPVATAISTNSDNS----- 56
S +KI PRKIRKL+ T T I E P TA T +
Sbjct: 57 SPPAKIPSRPRKIRKLSPDAAVVTTVNDPNSTQTSIKNTTEPPRTTATKTPRTKTAQHRA 116
Query: 57 -----PKIF-KPLTFKGEVDIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSIL 110
P+I + LT +GE++IA+RHLR+ DPLLA+LID + PPTF++ +PFL+LA+SIL
Sbjct: 117 IVALAPRIMARSLTCEGELEIAIRHLRNADPLLASLIDIYPPPTFDTFPTPFLALARSIL 176
Query: 111 YQQLAYKAAKSIYTRFVALFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYT 170
YQQLA+KA SIYTRF++L GE +LP+ VLA++PQQLR+IGVS RKASYL DLA KY
Sbjct: 177 YQQLAFKAGTSIYTRFISLCGGEAGVLPETVLALTPQQLRQIGVSGRKASYLHDLARKYQ 236
Query: 171 DGILSDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVL 230
+GILSD +IV MDD ++F MLT V GIG+WSVHMFMIFSLH+PDVLP+ DL VRKGLQVL
Sbjct: 237 NGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLQVRKGLQVL 296
Query: 231 YGLKELPGALKMEEVCEKWKPYRSVGSWYMWRLMEAKGVLPNVAKAAVTS 280
Y L ELP +M+ +CEKW+PYRSV SWY+WR E KG P+ A A +S
Sbjct: 297 YNLPELPRPSQMDHLCEKWRPYRSVASWYLWRFQEVKGS-PSSAVALASS 345
>gi|297844924|ref|XP_002890343.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297336185|gb|EFH66602.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 1262
Score = 314 bits (805), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 162/279 (58%), Positives = 201/279 (72%), Gaps = 22/279 (7%)
Query: 10 NISQNPSASSKITFPPRKIRKLTTITPIT----KIAEI------PVATAISTNSD----- 54
N+S PS KI PRKIRKLT ++ K +I P+AT S
Sbjct: 62 NVSSPPS---KIPLRPRKIRKLTLDGDVSGEDYKAEDISSQVTSPLATGKSPGKGKLSQS 118
Query: 55 ---NSPKI-FKPLTFKGEVDIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSIL 110
P+I +PLT +GE++ A+ +LR+ DPLLA LID H PPTFES ++PFL+L +SIL
Sbjct: 119 RVITVPRIQARPLTCEGELETAIHYLRNADPLLAALIDVHPPPTFESFKTPFLALIRSIL 178
Query: 111 YQQLAYKAAKSIYTRFVALFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYT 170
YQQLA KA SIYTRFVAL GE+ ++P+ VLA++PQQLR+IGVS RKASYL DLA KY
Sbjct: 179 YQQLATKAGNSIYTRFVALCGGENVVVPETVLALNPQQLRQIGVSGRKASYLHDLARKYQ 238
Query: 171 DGILSDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVL 230
+GILSD +I+ MD+ ++F MLT V GIG+WSVHMFMI SLH+PDVLPV DLGVRKG+Q+L
Sbjct: 239 NGILSDSAILNMDEKSLFTMLTMVNGIGSWSVHMFMINSLHRPDVLPVNDLGVRKGVQML 298
Query: 231 YGLKELPGALKMEEVCEKWKPYRSVGSWYMWRLMEAKGV 269
YGL +LP +ME+ C KW+PYRSVGSWYMWRL+E KG
Sbjct: 299 YGLDDLPRPSQMEQHCAKWRPYRSVGSWYMWRLIEGKGT 337
>gi|449460261|ref|XP_004147864.1| PREDICTED: uncharacterized protein LOC101202943 [Cucumis sativus]
gi|449476816|ref|XP_004154842.1| PREDICTED: uncharacterized LOC101202943 [Cucumis sativus]
Length = 382
Score = 314 bits (805), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 155/270 (57%), Positives = 196/270 (72%), Gaps = 18/270 (6%)
Query: 12 SQNPSASSKITFPPRKIRKLTTITPITKIAEI--------PVATAISTNSDNSPKIF--- 60
SQ S SK+ PRKIRKL+ + + P+AT S S + +
Sbjct: 52 SQISSPPSKMPLRPRKIRKLSPEESDPNSSHVVAIPDGPKPIATVKSNKSKTAHQRAAFA 111
Query: 61 -------KPLTFKGEVDIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQ 113
+ L+ +GEV+IALRHLR+ DPLLA LID H+ PTF+S ++PFL+L +SILYQQ
Sbjct: 112 SATVPPARSLSCEGEVEIALRHLRNADPLLAQLIDLHQRPTFDSFQTPFLALTRSILYQQ 171
Query: 114 LAYKAAKSIYTRFVALFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGI 173
LAYKA SIYTRF+AL GE +LP+ VLA++PQQLR+IG+S RK+SYL DLA KY +GI
Sbjct: 172 LAYKAGTSIYTRFIALCGGEAGVLPETVLALNPQQLRQIGISGRKSSYLHDLARKYQNGI 231
Query: 174 LSDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGL 233
LSD +IV MDD ++F MLT V GIG+WSVHMFMIFSLH+PDVLP+ DL VRKG+Q+LY L
Sbjct: 232 LSDPAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLNVRKGVQLLYNL 291
Query: 234 KELPGALKMEEVCEKWKPYRSVGSWYMWRL 263
+ELP +M+++CEKW+PYRSVGSWYMWRL
Sbjct: 292 EELPRPSQMDQLCEKWRPYRSVGSWYMWRL 321
>gi|145323948|ref|NP_001077563.1| DNA glycosylase domain-containing protein [Arabidopsis thaliana]
gi|62319794|dbj|BAD93800.1| hypothetical protein [Arabidopsis thaliana]
gi|110736462|dbj|BAF00199.1| hypothetical protein [Arabidopsis thaliana]
gi|332191736|gb|AEE29857.1| DNA glycosylase domain-containing protein [Arabidopsis thaliana]
Length = 377
Score = 313 bits (802), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 162/295 (54%), Positives = 205/295 (69%), Gaps = 28/295 (9%)
Query: 10 NISQNPSASSKITFPPRKIRKLTTITPITKIAEIPVATAISTNSDNSPKIF--------- 60
N+S PS KI PRKIRKLT ++ E A IS++ NSP
Sbjct: 62 NVSSPPS---KIPLRPRKIRKLTLDGDVS--GEDYKAEDISSSQVNSPLATDGKSPGKGK 116
Query: 61 --------------KPLTFKGEVDIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLA 106
+PLT +GE++ A+ +LR+ DPLLA LID H PPTFES ++PFL+L
Sbjct: 117 LSHLRAITVPRIQARPLTCEGELETAIHYLRNADPLLAALIDVHPPPTFESFKTPFLALI 176
Query: 107 KSILYQQLAYKAAKSIYTRFVALFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLA 166
++ILYQQLA KA SIYTRFV+L GE+ ++P+ VL+++PQQLR+IGVS RKASYL DLA
Sbjct: 177 RNILYQQLAMKAGNSIYTRFVSLCGGENLVVPETVLSLNPQQLRQIGVSGRKASYLHDLA 236
Query: 167 EKYTDGILSDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKG 226
KY +GILSD +I+ MD+ ++F MLT V GIG+WSVHMFMI SLH+PDVLPV DLGVRKG
Sbjct: 237 RKYQNGILSDSAILNMDEKSLFTMLTMVNGIGSWSVHMFMINSLHRPDVLPVNDLGVRKG 296
Query: 227 LQVLYGLKELPGALKMEEVCEKWKPYRSVGSWYMWRLMEAKGVLPNVAKAAVTSV 281
+Q+LYGL +LP +ME+ C KW+PYRSVGSWYMWRL+EAK + A AA S+
Sbjct: 297 VQLLYGLDDLPRPSQMEQHCAKWRPYRSVGSWYMWRLIEAKSTSTSAAVAAGVSL 351
>gi|18394744|ref|NP_564085.1| DNA glycosylase domain-containing protein [Arabidopsis thaliana]
gi|111074400|gb|ABH04573.1| At1g19480 [Arabidopsis thaliana]
gi|332191735|gb|AEE29856.1| DNA glycosylase domain-containing protein [Arabidopsis thaliana]
Length = 382
Score = 313 bits (801), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 162/295 (54%), Positives = 205/295 (69%), Gaps = 28/295 (9%)
Query: 10 NISQNPSASSKITFPPRKIRKLTTITPITKIAEIPVATAISTNSDNSPKIF--------- 60
N+S PS KI PRKIRKLT ++ E A IS++ NSP
Sbjct: 62 NVSSPPS---KIPLRPRKIRKLTLDGDVS--GEDYKAEDISSSQVNSPLATDGKSPGKGK 116
Query: 61 --------------KPLTFKGEVDIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLA 106
+PLT +GE++ A+ +LR+ DPLLA LID H PPTFES ++PFL+L
Sbjct: 117 LSHLRAITVPRIQARPLTCEGELETAIHYLRNADPLLAALIDVHPPPTFESFKTPFLALI 176
Query: 107 KSILYQQLAYKAAKSIYTRFVALFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLA 166
++ILYQQLA KA SIYTRFV+L GE+ ++P+ VL+++PQQLR+IGVS RKASYL DLA
Sbjct: 177 RNILYQQLAMKAGNSIYTRFVSLCGGENLVVPETVLSLNPQQLRQIGVSGRKASYLHDLA 236
Query: 167 EKYTDGILSDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKG 226
KY +GILSD +I+ MD+ ++F MLT V GIG+WSVHMFMI SLH+PDVLPV DLGVRKG
Sbjct: 237 RKYQNGILSDSAILNMDEKSLFTMLTMVNGIGSWSVHMFMINSLHRPDVLPVNDLGVRKG 296
Query: 227 LQVLYGLKELPGALKMEEVCEKWKPYRSVGSWYMWRLMEAKGVLPNVAKAAVTSV 281
+Q+LYGL +LP +ME+ C KW+PYRSVGSWYMWRL+EAK + A AA S+
Sbjct: 297 VQLLYGLDDLPRPSQMEQHCAKWRPYRSVGSWYMWRLIEAKSTSTSAAVAAGVSL 351
>gi|8778423|gb|AAF79431.1|AC025808_13 F18O14.25 [Arabidopsis thaliana]
Length = 1314
Score = 312 bits (800), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 162/295 (54%), Positives = 205/295 (69%), Gaps = 28/295 (9%)
Query: 10 NISQNPSASSKITFPPRKIRKLTTITPITKIAEIPVATAISTNSDNSPKIF--------- 60
N+S PS KI PRKIRKLT ++ E A IS++ NSP
Sbjct: 62 NVSSPPS---KIPLRPRKIRKLTLDGDVS--GEDYKAEDISSSQVNSPLATDGKSPGKGK 116
Query: 61 --------------KPLTFKGEVDIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLA 106
+PLT +GE++ A+ +LR+ DPLLA LID H PPTFES ++PFL+L
Sbjct: 117 LSHLRAITVPRIQARPLTCEGELETAIHYLRNADPLLAALIDVHPPPTFESFKTPFLALI 176
Query: 107 KSILYQQLAYKAAKSIYTRFVALFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLA 166
++ILYQQLA KA SIYTRFV+L GE+ ++P+ VL+++PQQLR+IGVS RKASYL DLA
Sbjct: 177 RNILYQQLAMKAGNSIYTRFVSLCGGENLVVPETVLSLNPQQLRQIGVSGRKASYLHDLA 236
Query: 167 EKYTDGILSDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKG 226
KY +GILSD +I+ MD+ ++F MLT V GIG+WSVHMFMI SLH+PDVLPV DLGVRKG
Sbjct: 237 RKYQNGILSDSAILNMDEKSLFTMLTMVNGIGSWSVHMFMINSLHRPDVLPVNDLGVRKG 296
Query: 227 LQVLYGLKELPGALKMEEVCEKWKPYRSVGSWYMWRLMEAKGVLPNVAKAAVTSV 281
+Q+LYGL +LP +ME+ C KW+PYRSVGSWYMWRL+EAK + A AA S+
Sbjct: 297 VQLLYGLDDLPRPSQMEQHCAKWRPYRSVGSWYMWRLIEAKSTSTSAAVAAGVSL 351
>gi|21593178|gb|AAM65127.1| unknown [Arabidopsis thaliana]
Length = 382
Score = 312 bits (799), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 160/293 (54%), Positives = 207/293 (70%), Gaps = 24/293 (8%)
Query: 10 NISQNPSASSKITFPPRKIRKLTTITPIT-------KIAEIPVATAISTNSDNS------ 56
N+S PS KI PRKIRKLT ++ I+ V + +ST+ +
Sbjct: 62 NVSSPPS---KIPLRPRKIRKLTLDGDVSGEDYKAEDISSSQVNSPLSTDGKSPGKGKLS 118
Query: 57 -------PKI-FKPLTFKGEVDIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKS 108
P+I +PLT +GE++ A+ +LR+ DPLLA LID H PPTFES ++PFL+L ++
Sbjct: 119 HLRAITVPRIQARPLTCEGELETAIHYLRNADPLLAALIDVHPPPTFESFKTPFLALIRN 178
Query: 109 ILYQQLAYKAAKSIYTRFVALFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEK 168
ILYQQLA KA SIYTRFV+L GE+ ++P+ VL+++PQQLR+IGVS RKASYL DLA K
Sbjct: 179 ILYQQLAMKAGNSIYTRFVSLCGGENLVVPETVLSLNPQQLRQIGVSGRKASYLHDLARK 238
Query: 169 YTDGILSDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQ 228
Y +GILSD +I+ MD+ ++F MLT V GIG+WSVHMFMI SLH+PDVLPV DLGVRKG+Q
Sbjct: 239 YQNGILSDSAILNMDEKSLFTMLTMVNGIGSWSVHMFMINSLHRPDVLPVNDLGVRKGVQ 298
Query: 229 VLYGLKELPGALKMEEVCEKWKPYRSVGSWYMWRLMEAKGVLPNVAKAAVTSV 281
+LYGL +LP +ME+ C KW+PYRSVGSWYMWRL+EAK + AA S+
Sbjct: 299 LLYGLDDLPRPSQMEQHCAKWRPYRSVGSWYMWRLIEAKSTSTSAXVAAGVSL 351
>gi|297839395|ref|XP_002887579.1| hypothetical protein ARALYDRAFT_476667 [Arabidopsis lyrata subsp.
lyrata]
gi|297333420|gb|EFH63838.1| hypothetical protein ARALYDRAFT_476667 [Arabidopsis lyrata subsp.
lyrata]
Length = 389
Score = 310 bits (795), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 158/279 (56%), Positives = 196/279 (70%), Gaps = 19/279 (6%)
Query: 10 NISQNPSASSKITFPPRKIRKLT----------TITPITKIAEIPVATAISTNSDNS--- 56
N+S PS KI PRKIRKL+ P + A+ + S
Sbjct: 65 NVSSPPS---KIPLRPRKIRKLSPDDDASGNGDGFNPEHNLLATTSKPAVKSKLSQSRCV 121
Query: 57 --PKIF-KPLTFKGEVDIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQ 113
P+I + LT +GE++ AL HLR DPLLA+LID H PPTFE+ +PFL+L +SILYQQ
Sbjct: 122 TVPRIHARSLTCEGELEAALHHLRSVDPLLASLIDIHPPPTFETFHTPFLALIRSILYQQ 181
Query: 114 LAYKAAKSIYTRFVALFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGI 173
LA KA SIYTRFVAL GE+ ++P+ VL ++PQQLR+IGVS RKASYL DLA KY +GI
Sbjct: 182 LAAKAGNSIYTRFVALCGGENGVVPENVLPLTPQQLRQIGVSGRKASYLHDLARKYQNGI 241
Query: 174 LSDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGL 233
LSD IV MD+ ++F MLT V GIG+WSVHMFMI SLH+PDVLPV DLGVRKG+Q+L +
Sbjct: 242 LSDSGIVNMDEKSLFTMLTMVNGIGSWSVHMFMINSLHRPDVLPVNDLGVRKGVQMLNAM 301
Query: 234 KELPGALKMEEVCEKWKPYRSVGSWYMWRLMEAKGVLPN 272
++LP KME++CEKW+PYRSV SWYMWRL+E+KG PN
Sbjct: 302 EDLPRPSKMEQLCEKWRPYRSVASWYMWRLIESKGTPPN 340
>gi|297816336|ref|XP_002876051.1| HhH-GPD base excision DNA repair family protein [Arabidopsis lyrata
subsp. lyrata]
gi|297321889|gb|EFH52310.1| HhH-GPD base excision DNA repair family protein [Arabidopsis lyrata
subsp. lyrata]
Length = 273
Score = 310 bits (794), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 155/262 (59%), Positives = 194/262 (74%), Gaps = 26/262 (9%)
Query: 12 SQNPSASSKITFPPRKIRKLTTITPITKIAEIPVATAISTNSDNSPKIF----KPLTFKG 67
S+ +SS+ITF PRKIRK++ SD SP+I PL+ K
Sbjct: 29 SEASGSSSRITFRPRKIRKVS--------------------SDPSPRIIITASPPLSTKS 68
Query: 68 EVDIALRHLRDKDPLLATLIDAHR-PPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRF 126
VD+ALRHL+ D LL +I +H PP FESS PFLSLA+SILYQQLA KAAK IY RF
Sbjct: 69 TVDLALRHLQSSDELLGAIITSHNDPPVFESSNPPFLSLARSILYQQLATKAAKCIYDRF 128
Query: 127 VALFNG-EDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDV 185
++LFNG E ++P++V+++S LR+IGVS RKASYL DLAEKY +G+LSDE I++M D
Sbjct: 129 ISLFNGGESGVVPESVISLSAVDLRKIGVSGRKASYLHDLAEKYNNGVLSDELIMKMSDE 188
Query: 186 TMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEV 245
+ + LT VKGIG W+VHMFMIFSLH+PDVLPVGDLGVR G++ LYGLK+LPG L+ME++
Sbjct: 189 ELIERLTLVKGIGVWTVHMFMIFSLHRPDVLPVGDLGVRNGVKDLYGLKDLPGPLQMEQL 248
Query: 246 CEKWKPYRSVGSWYMWRLMEAK 267
CEKW+PYRSVGSWYMWRL+EA+
Sbjct: 249 CEKWRPYRSVGSWYMWRLIEAR 270
>gi|224094797|ref|XP_002310239.1| predicted protein [Populus trichocarpa]
gi|224167699|ref|XP_002339063.1| predicted protein [Populus trichocarpa]
gi|222853142|gb|EEE90689.1| predicted protein [Populus trichocarpa]
gi|222874293|gb|EEF11424.1| predicted protein [Populus trichocarpa]
Length = 207
Score = 308 bits (788), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 144/207 (69%), Positives = 169/207 (81%)
Query: 61 KPLTFKGEVDIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAK 120
KPL+ KGE+++AL HL DPLLA L+++H PP SPFLSL KSIL+QQLA AAK
Sbjct: 1 KPLSHKGEIELALDHLSKSDPLLAPLLNSHEPPALNPCTSPFLSLTKSILFQQLATNAAK 60
Query: 121 SIYTRFVALFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIV 180
SIYTRF+ L +GE + PD VL++S +LREIGVS RKASYL DLAEKY +G LSD SI+
Sbjct: 61 SIYTRFLTLCDGESQVNPDTVLSLSAPKLREIGVSGRKASYLHDLAEKYRNGSLSDSSIL 120
Query: 181 EMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGAL 240
EM+D + LT VKGIG WSVHMFM+FSLH+PDVLPVGDLGVRKG+Q LYGLK+LP AL
Sbjct: 121 EMNDDMLLNRLTEVKGIGVWSVHMFMLFSLHRPDVLPVGDLGVRKGVQSLYGLKDLPQAL 180
Query: 241 KMEEVCEKWKPYRSVGSWYMWRLMEAK 267
+ME++CEKWKPYRSVGSWYMWRLMEAK
Sbjct: 181 EMEQICEKWKPYRSVGSWYMWRLMEAK 207
>gi|18410802|ref|NP_565105.1| DNA-3-methyladenine glycosylase II [Arabidopsis thaliana]
gi|13430602|gb|AAK25923.1|AF360213_1 putative 3-methyladenine DNA glycosylase [Arabidopsis thaliana]
gi|15293165|gb|AAK93693.1| putative 3-methyladenine DNA glycosylase [Arabidopsis thaliana]
gi|332197570|gb|AEE35691.1| DNA-3-methyladenine glycosylase II [Arabidopsis thaliana]
Length = 391
Score = 306 bits (785), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 156/273 (57%), Positives = 199/273 (72%), Gaps = 19/273 (6%)
Query: 10 NISQNPSASSKITFPPRKIRKLTT-------ITPITKIAEIPVATAISTNSDNS------ 56
N+S P+ KI PRKIRKL+ P ++++ T +T S S
Sbjct: 65 NVSSPPT---KIPLRPRKIRKLSPDDDASDGFNPEHNLSQM-TTTKPATKSKLSQSRTVT 120
Query: 57 -PKI-FKPLTFKGEVDIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQL 114
P+I + LT +GE++ AL HLR DPLLA+LID H PPTFE+ ++PFL+L +SILYQQL
Sbjct: 121 VPRIQARSLTCEGELEAALHHLRSVDPLLASLIDIHPPPTFETFQTPFLALIRSILYQQL 180
Query: 115 AYKAAKSIYTRFVALFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGIL 174
A KA SIYTRFVAL GE+ ++P+ VL ++PQQLR+IGVS RKASYL DLA KY +GIL
Sbjct: 181 AAKAGNSIYTRFVALCGGENGVVPENVLPLTPQQLRQIGVSGRKASYLHDLARKYQNGIL 240
Query: 175 SDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLK 234
SD IV MD+ ++F MLT V GIG+WSVHMFMI SLH+PDVLPV DLGVRKG+Q+L G++
Sbjct: 241 SDSGIVNMDEKSLFTMLTMVNGIGSWSVHMFMINSLHRPDVLPVNDLGVRKGVQMLNGME 300
Query: 235 ELPGALKMEEVCEKWKPYRSVGSWYMWRLMEAK 267
+LP KME++CEKW+PYRSV SWY+WRL+E+K
Sbjct: 301 DLPRPSKMEQLCEKWRPYRSVASWYLWRLIESK 333
>gi|42572113|ref|NP_974147.1| DNA-3-methyladenine glycosylase II [Arabidopsis thaliana]
gi|332197569|gb|AEE35690.1| DNA-3-methyladenine glycosylase II [Arabidopsis thaliana]
Length = 394
Score = 306 bits (785), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 156/273 (57%), Positives = 199/273 (72%), Gaps = 19/273 (6%)
Query: 10 NISQNPSASSKITFPPRKIRKLTT-------ITPITKIAEIPVATAISTNSDNS------ 56
N+S P+ KI PRKIRKL+ P ++++ T +T S S
Sbjct: 65 NVSSPPT---KIPLRPRKIRKLSPDDDASDGFNPEHNLSQM-TTTKPATKSKLSQSRTVT 120
Query: 57 -PKI-FKPLTFKGEVDIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQL 114
P+I + LT +GE++ AL HLR DPLLA+LID H PPTFE+ ++PFL+L +SILYQQL
Sbjct: 121 VPRIQARSLTCEGELEAALHHLRSVDPLLASLIDIHPPPTFETFQTPFLALIRSILYQQL 180
Query: 115 AYKAAKSIYTRFVALFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGIL 174
A KA SIYTRFVAL GE+ ++P+ VL ++PQQLR+IGVS RKASYL DLA KY +GIL
Sbjct: 181 AAKAGNSIYTRFVALCGGENGVVPENVLPLTPQQLRQIGVSGRKASYLHDLARKYQNGIL 240
Query: 175 SDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLK 234
SD IV MD+ ++F MLT V GIG+WSVHMFMI SLH+PDVLPV DLGVRKG+Q+L G++
Sbjct: 241 SDSGIVNMDEKSLFTMLTMVNGIGSWSVHMFMINSLHRPDVLPVNDLGVRKGVQMLNGME 300
Query: 235 ELPGALKMEEVCEKWKPYRSVGSWYMWRLMEAK 267
+LP KME++CEKW+PYRSV SWY+WRL+E+K
Sbjct: 301 DLPRPSKMEQLCEKWRPYRSVASWYLWRLIESK 333
>gi|15230333|ref|NP_190657.1| DNA-3-methyladenine glycosylase II [Arabidopsis thaliana]
gi|4835239|emb|CAB42917.1| putative DNA-3-methyladenine glycosidase [Arabidopsis thaliana]
gi|26453173|dbj|BAC43662.1| putative DNA-3-methyladenine glycosidase [Arabidopsis thaliana]
gi|28950831|gb|AAO63339.1| At3g50880 [Arabidopsis thaliana]
gi|332645200|gb|AEE78721.1| DNA-3-methyladenine glycosylase II [Arabidopsis thaliana]
Length = 273
Score = 306 bits (784), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 154/263 (58%), Positives = 193/263 (73%), Gaps = 26/263 (9%)
Query: 11 ISQNPSASSKITFPPRKIRKLTTITPITKIAEIPVATAISTNSDNSPKIF----KPLTFK 66
+S+ +SS+I F PRKIRK++ SD SP+I PL+ K
Sbjct: 28 VSEVSGSSSRIRFRPRKIRKVS--------------------SDPSPRIIITASPPLSTK 67
Query: 67 GEVDIALRHLRDKDPLLATLIDAHR-PPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTR 125
VDIALRHL+ D LL LI H PP F+SS +PFLSLA+SILYQQLA KAAK IY R
Sbjct: 68 STVDIALRHLQSSDELLGALITTHNDPPLFDSSNTPFLSLARSILYQQLATKAAKCIYDR 127
Query: 126 FVALFNG-EDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDD 184
F++LFNG E ++P++V+++S LR+IGVS RKASYL DLA+KY +G+LSDE I++M D
Sbjct: 128 FISLFNGGEAGVVPESVISLSAVDLRKIGVSGRKASYLHDLADKYNNGVLSDELILKMSD 187
Query: 185 VTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEE 244
+ LT VKGIG W+VHMFMIFSLH+PDVLPVGDLGVRKG++ LYGLK LPG L+ME+
Sbjct: 188 EELIDRLTLVKGIGVWTVHMFMIFSLHRPDVLPVGDLGVRKGVKDLYGLKNLPGPLQMEQ 247
Query: 245 VCEKWKPYRSVGSWYMWRLMEAK 267
+CEKW+PYRSVGSWYMWRL+E++
Sbjct: 248 LCEKWRPYRSVGSWYMWRLIESR 270
>gi|10092274|gb|AAG12687.1|AC025814_11 3-methyladenine DNA glycosylase, putative; 31680-30045 [Arabidopsis
thaliana]
Length = 428
Score = 304 bits (779), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 156/273 (57%), Positives = 199/273 (72%), Gaps = 19/273 (6%)
Query: 10 NISQNPSASSKITFPPRKIRKLTT-------ITPITKIAEIPVATAISTNSDNS------ 56
N+S P+ KI PRKIRKL+ P ++++ T +T S S
Sbjct: 65 NVSSPPT---KIPLRPRKIRKLSPDDDASDGFNPEHNLSQM-TTTKPATKSKLSQSRTVT 120
Query: 57 -PKI-FKPLTFKGEVDIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQL 114
P+I + LT +GE++ AL HLR DPLLA+LID H PPTFE+ ++PFL+L +SILYQQL
Sbjct: 121 VPRIQARSLTCEGELEAALHHLRSVDPLLASLIDIHPPPTFETFQTPFLALIRSILYQQL 180
Query: 115 AYKAAKSIYTRFVALFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGIL 174
A KA SIYTRFVAL GE+ ++P+ VL ++PQQLR+IGVS RKASYL DLA KY +GIL
Sbjct: 181 AAKAGNSIYTRFVALCGGENGVVPENVLPLTPQQLRQIGVSGRKASYLHDLARKYQNGIL 240
Query: 175 SDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLK 234
SD IV MD+ ++F MLT V GIG+WSVHMFMI SLH+PDVLPV DLGVRKG+Q+L G++
Sbjct: 241 SDSGIVNMDEKSLFTMLTMVNGIGSWSVHMFMINSLHRPDVLPVNDLGVRKGVQMLNGME 300
Query: 235 ELPGALKMEEVCEKWKPYRSVGSWYMWRLMEAK 267
+LP KME++CEKW+PYRSV SWY+WRL+E+K
Sbjct: 301 DLPRPSKMEQLCEKWRPYRSVASWYLWRLIESK 333
>gi|449451521|ref|XP_004143510.1| PREDICTED: DNA-3-methyladenine glycosylase 1-like [Cucumis sativus]
gi|449496495|ref|XP_004160148.1| PREDICTED: DNA-3-methyladenine glycosylase 1-like [Cucumis sativus]
Length = 284
Score = 303 bits (776), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 154/273 (56%), Positives = 197/273 (72%), Gaps = 16/273 (5%)
Query: 8 SDNISQNPSASSKITFPPRKIRKLTTITPITKIAEIPVATAISTNSDNSP-KIF------ 60
SD + +PSASSKI FP K+RK+++ + P IS +P +IF
Sbjct: 17 SDAVPLSPSASSKIPFPSTKVRKISS-------NQEPTKPQISAPGGYNPTRIFPNLADP 69
Query: 61 -KPLTFKGEVDIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAA 119
K L+ ++ A+ HLR DPLL +L+D+ P F+S+ PFL+L KSILYQQLA KAA
Sbjct: 70 VKSLSSSDKISTAINHLRRSDPLLISLLDSCETPNFKSN-PPFLALTKSILYQQLATKAA 128
Query: 120 KSIYTRFVALFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESI 179
++IY RF +L GE +LPD VL +SPQQLR IGVS RKASYL DLA K+ +G LS+ I
Sbjct: 129 EAIYNRFASLCGGEAAVLPDTVLGLSPQQLRVIGVSGRKASYLHDLATKFIEGSLSNSFI 188
Query: 180 VEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGA 239
+EMDD T+ + LT+VKGIG WSVHMFMIF+LH+PDVLPVGDLGVRKG+Q LYGLKELP
Sbjct: 189 LEMDDETLLRALTAVKGIGVWSVHMFMIFTLHRPDVLPVGDLGVRKGVQRLYGLKELPKP 248
Query: 240 LKMEEVCEKWKPYRSVGSWYMWRLMEAKGVLPN 272
+ME++CEKWKPYRS+G+WYMWRL++AK ++ N
Sbjct: 249 AEMEKLCEKWKPYRSIGAWYMWRLIDAKEIVKN 281
>gi|224082864|ref|XP_002306870.1| predicted protein [Populus trichocarpa]
gi|222856319|gb|EEE93866.1| predicted protein [Populus trichocarpa]
Length = 374
Score = 303 bits (776), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 135/214 (63%), Positives = 177/214 (82%), Gaps = 1/214 (0%)
Query: 56 SPKIF-KPLTFKGEVDIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQL 114
+P+I + LT +GE++ A+ +LR+ DPLLA+LID ++PP+F++ +PFL+LA+SILYQQL
Sbjct: 117 TPRIVARSLTCEGELEYAIHYLRNADPLLASLIDIYQPPSFDTFPTPFLALARSILYQQL 176
Query: 115 AYKAAKSIYTRFVALFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGIL 174
A+KA SIYTRF++L GE +LP+ VLA++PQQLR+ GVS RKASYL DLA KY +GIL
Sbjct: 177 AFKAGSSIYTRFISLCGGEAGVLPETVLALTPQQLRQFGVSGRKASYLHDLARKYQNGIL 236
Query: 175 SDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLK 234
SD +IV MDD ++F MLT V GIG+WSVHMFMIFSLH+PDVLP+ DL VRKG+Q+LY L
Sbjct: 237 SDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLQVRKGVQLLYNLP 296
Query: 235 ELPGALKMEEVCEKWKPYRSVGSWYMWRLMEAKG 268
ELP +M+++CEKW+PYRSV SWY+WRL E+KG
Sbjct: 297 ELPRPSQMDQLCEKWRPYRSVASWYLWRLQESKG 330
>gi|212723910|ref|NP_001132742.1| uncharacterized protein LOC100194229 [Zea mays]
gi|194695282|gb|ACF81725.1| unknown [Zea mays]
gi|413948595|gb|AFW81244.1| hypothetical protein ZEAMMB73_471768 [Zea mays]
Length = 327
Score = 300 bits (767), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 136/207 (65%), Positives = 167/207 (80%)
Query: 61 KPLTFKGEVDIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAK 120
+PL+ GEV +A+RHLR DP LA +IDAH PP F+ PF SL +SILYQQLA+KAA
Sbjct: 86 QPLSAAGEVGVAIRHLRAVDPALAAVIDAHEPPVFQCPHRPFHSLVRSILYQQLAFKAAA 145
Query: 121 SIYTRFVALFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIV 180
S+Y+RF+AL GE ++ PDAVLA+SP QLR+IGVS RKASYL DLA KY GILSD SIV
Sbjct: 146 SVYSRFLALLGGEASVAPDAVLALSPHQLRQIGVSPRKASYLHDLARKYASGILSDASIV 205
Query: 181 EMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGAL 240
MDD ++ MLT VKGIGAWSVHMFMIFSL +PDVLP DLGVRKG+Q+LY L+++P
Sbjct: 206 NMDDRSLAAMLTMVKGIGAWSVHMFMIFSLARPDVLPSADLGVRKGVQMLYALQDVPRPS 265
Query: 241 KMEEVCEKWKPYRSVGSWYMWRLMEAK 267
+M+ +CE+W+PYRSVG+WYMWRL+E+K
Sbjct: 266 QMDRLCERWRPYRSVGAWYMWRLIESK 292
>gi|242088949|ref|XP_002440307.1| hypothetical protein SORBIDRAFT_09g029530 [Sorghum bicolor]
gi|241945592|gb|EES18737.1| hypothetical protein SORBIDRAFT_09g029530 [Sorghum bicolor]
Length = 338
Score = 298 bits (762), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 133/207 (64%), Positives = 168/207 (81%)
Query: 61 KPLTFKGEVDIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAK 120
+PL+ GEV +A+RHLR DP LA +IDAH PP F+ PF SL +SILYQQLA+KAA
Sbjct: 82 RPLSAAGEVGVAIRHLRVADPALAAVIDAHEPPVFQCPHRPFHSLVRSILYQQLAFKAAA 141
Query: 121 SIYTRFVALFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIV 180
S+Y+RF++L GE + PDAVLA++P QLR+IGVS RKASYL DLA KY DGILSD ++V
Sbjct: 142 SVYSRFLSLLGGEAGVAPDAVLALTPHQLRQIGVSPRKASYLHDLARKYADGILSDSAVV 201
Query: 181 EMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGAL 240
MDD ++ MLT VKGIGAWSVHMFMIFSL +PDVLP DLGVRKG+Q+LY L+++P
Sbjct: 202 NMDDRSLAAMLTMVKGIGAWSVHMFMIFSLARPDVLPSADLGVRKGVQMLYALEDVPRPS 261
Query: 241 KMEEVCEKWKPYRSVGSWYMWRLMEAK 267
+M+++CE+W+PYRSVG+WYMWRL+E+K
Sbjct: 262 QMDKLCERWRPYRSVGAWYMWRLIESK 288
>gi|5091600|gb|AAD39589.1|AC007858_3 10A19I.4 [Oryza sativa Japonica Group]
gi|215769455|dbj|BAH01684.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 334
Score = 294 bits (753), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 134/207 (64%), Positives = 167/207 (80%)
Query: 61 KPLTFKGEVDIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAK 120
+PL+ GEV A++HLR DP LAT+IDAH PP F+ PF SL +SILYQQLA+KAA
Sbjct: 77 RPLSADGEVAAAIQHLRAADPALATVIDAHDPPAFQCPHRPFHSLVRSILYQQLAFKAAA 136
Query: 121 SIYTRFVALFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIV 180
S+Y+RF++L GE N+LP+AVLA++ Q LR+IGVS RKASYL DLA KY GILSD ++V
Sbjct: 137 SVYSRFLSLLGGEHNVLPEAVLALTTQDLRQIGVSPRKASYLHDLARKYASGILSDAAVV 196
Query: 181 EMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGAL 240
MDD ++ MLT VKGIGAWSVHMFMIFSL++PDVLP DLGVRKG+Q LYGL +P
Sbjct: 197 NMDDRSLAAMLTMVKGIGAWSVHMFMIFSLNRPDVLPAADLGVRKGVQHLYGLDAVPRPS 256
Query: 241 KMEEVCEKWKPYRSVGSWYMWRLMEAK 267
+ME++CE+W+PYRSVG+WYMWRL+E+K
Sbjct: 257 QMEKLCEQWRPYRSVGAWYMWRLIESK 283
>gi|357483447|ref|XP_003612010.1| DNA-3-methyladenine glycosylase [Medicago truncatula]
gi|355513345|gb|AES94968.1| DNA-3-methyladenine glycosylase [Medicago truncatula]
Length = 281
Score = 294 bits (752), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 149/258 (57%), Positives = 185/258 (71%), Gaps = 12/258 (4%)
Query: 18 SSKITFPPRKIRKLTTIT-PITKIAEIPVATAISTNSDNSPKIFKPLTFKGEVDIALRHL 76
SSKITFP +KI K T T K P+ T I I KPLT + E+ AL HL
Sbjct: 27 SSKITFPAKKILKPTIKTKEEVKKPHFPLLTPI---------IQKPLTSQNEITAALNHL 77
Query: 77 RDKDPLLATLIDAHRPPTFESSR--SPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGED 134
R DPLL+T+I+ PP F +S +PF SL K+++ QQL+ KA+ SI RF++LF +
Sbjct: 78 RAADPLLSTIINTFPPPQFSNSNAITPFFSLIKTLISQQLSIKASSSIEQRFISLFTNQC 137
Query: 135 NILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSV 194
+ILP+ VL+V+P LR +G+S RKA+Y+ DLA KY DG LSD SIVEMDD +++ L SV
Sbjct: 138 SILPNTVLSVTPDTLRSVGISARKATYIHDLATKYADGFLSDSSIVEMDDEMLYEKLMSV 197
Query: 195 KGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRS 254
KGIG WSVHMFMIF+LH+PDVLPVGDL VR+G++ LYGLK LP KME +CEKWKPYRS
Sbjct: 198 KGIGPWSVHMFMIFTLHRPDVLPVGDLVVRRGVEKLYGLKVLPSPEKMEGLCEKWKPYRS 257
Query: 255 VGSWYMWRLMEAKGVLPN 272
VGSWYM+R +EAKGVLPN
Sbjct: 258 VGSWYMYRFVEAKGVLPN 275
>gi|388495518|gb|AFK35825.1| unknown [Medicago truncatula]
Length = 281
Score = 294 bits (752), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 149/258 (57%), Positives = 185/258 (71%), Gaps = 12/258 (4%)
Query: 18 SSKITFPPRKIRKLTTIT-PITKIAEIPVATAISTNSDNSPKIFKPLTFKGEVDIALRHL 76
SSKITFP +KI K T T K P+ T I I KPLT + E+ AL HL
Sbjct: 27 SSKITFPAKKILKPTIKTKEEVKKPHFPLLTPI---------IQKPLTSQNEITAALNHL 77
Query: 77 RDKDPLLATLIDAHRPPTFESSR--SPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGED 134
R DPLL+T+I+ PP F +S +PF SL K+++ QQL+ KA+ SI RF++LF +
Sbjct: 78 RAADPLLSTIINTFPPPQFSNSNAITPFFSLIKTLISQQLSIKASSSIEQRFISLFTNQC 137
Query: 135 NILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSV 194
+ILP+ VL+V+P LR +G+S RKA+Y+ DLA KY DG LSD SIVEMDD +++ L SV
Sbjct: 138 SILPNTVLSVTPDTLRSVGISARKAAYIHDLATKYADGFLSDSSIVEMDDEMLYEKLMSV 197
Query: 195 KGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRS 254
KGIG WSVHMFMIF+LH+PDVLPVGDL VR+G++ LYGLK LP KME +CEKWKPYRS
Sbjct: 198 KGIGPWSVHMFMIFTLHRPDVLPVGDLVVRRGVEKLYGLKVLPSPEKMEGLCEKWKPYRS 257
Query: 255 VGSWYMWRLMEAKGVLPN 272
VGSWYM+R +EAKGVLPN
Sbjct: 258 VGSWYMYRFVEAKGVLPN 275
>gi|115465635|ref|NP_001056417.1| Os05g0579100 [Oryza sativa Japonica Group]
gi|51854312|gb|AAU10693.1| hypothetical protein [Oryza sativa Japonica Group]
gi|113579968|dbj|BAF18331.1| Os05g0579100 [Oryza sativa Japonica Group]
Length = 323
Score = 293 bits (751), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 134/207 (64%), Positives = 167/207 (80%)
Query: 61 KPLTFKGEVDIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAK 120
+PL+ GEV A++HLR DP LAT+IDAH PP F+ PF SL +SILYQQLA+KAA
Sbjct: 66 RPLSADGEVAAAIQHLRAADPALATVIDAHDPPAFQCPHRPFHSLVRSILYQQLAFKAAA 125
Query: 121 SIYTRFVALFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIV 180
S+Y+RF++L GE N+LP+AVLA++ Q LR+IGVS RKASYL DLA KY GILSD ++V
Sbjct: 126 SVYSRFLSLLGGEHNVLPEAVLALTTQDLRQIGVSPRKASYLHDLARKYASGILSDAAVV 185
Query: 181 EMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGAL 240
MDD ++ MLT VKGIGAWSVHMFMIFSL++PDVLP DLGVRKG+Q LYGL +P
Sbjct: 186 NMDDRSLAAMLTMVKGIGAWSVHMFMIFSLNRPDVLPAADLGVRKGVQHLYGLDAVPRPS 245
Query: 241 KMEEVCEKWKPYRSVGSWYMWRLMEAK 267
+ME++CE+W+PYRSVG+WYMWRL+E+K
Sbjct: 246 QMEKLCEQWRPYRSVGAWYMWRLIESK 272
>gi|222632677|gb|EEE64809.1| hypothetical protein OsJ_19665 [Oryza sativa Japonica Group]
Length = 328
Score = 293 bits (751), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 134/207 (64%), Positives = 167/207 (80%)
Query: 61 KPLTFKGEVDIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAK 120
+PL+ GEV A++HLR DP LAT+IDAH PP F+ PF SL +SILYQQLA+KAA
Sbjct: 71 RPLSADGEVAAAIQHLRAADPALATVIDAHDPPAFQCPHRPFHSLVRSILYQQLAFKAAA 130
Query: 121 SIYTRFVALFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIV 180
S+Y+RF++L GE N+LP+AVLA++ Q LR+IGVS RKASYL DLA KY GILSD ++V
Sbjct: 131 SVYSRFLSLLGGEHNVLPEAVLALTTQDLRQIGVSPRKASYLHDLARKYASGILSDAAVV 190
Query: 181 EMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGAL 240
MDD ++ MLT VKGIGAWSVHMFMIFSL++PDVLP DLGVRKG+Q LYGL +P
Sbjct: 191 NMDDRSLAAMLTMVKGIGAWSVHMFMIFSLNRPDVLPAADLGVRKGVQHLYGLDAVPRPS 250
Query: 241 KMEEVCEKWKPYRSVGSWYMWRLMEAK 267
+ME++CE+W+PYRSVG+WYMWRL+E+K
Sbjct: 251 QMEKLCEQWRPYRSVGAWYMWRLIESK 277
>gi|326502686|dbj|BAJ98971.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326511807|dbj|BAJ92048.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 326
Score = 293 bits (750), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 135/208 (64%), Positives = 168/208 (80%)
Query: 61 KPLTFKGEVDIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAK 120
+PL+ GEV+ A+RHLR DP LA +IDAH P+F PF SLA+SILYQQLA+KAA
Sbjct: 67 RPLSADGEVEAAIRHLRVADPALAPVIDAHELPSFHCPHPPFHSLARSILYQQLAFKAAA 126
Query: 121 SIYTRFVALFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIV 180
S+Y+RF+AL GE +LPDAVLA+S +QLR+IGVS RKASYL DLA KY GILSD+SIV
Sbjct: 127 SVYSRFIALVGGEAGVLPDAVLALSAEQLRQIGVSARKASYLHDLARKYASGILSDDSIV 186
Query: 181 EMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGAL 240
MDD ++ MLT V GIGAWSVHMFMI+SL +PDVLP DLGVRKG+Q+LYGL+++P
Sbjct: 187 AMDDRSLAAMLTMVNGIGAWSVHMFMIYSLARPDVLPSADLGVRKGVQMLYGLEDVPRPS 246
Query: 241 KMEEVCEKWKPYRSVGSWYMWRLMEAKG 268
+ME++CE+W+PYRSV +WYMWRL+E+K
Sbjct: 247 QMEKLCERWRPYRSVAAWYMWRLIESKA 274
>gi|226507162|ref|NP_001141973.1| uncharacterized protein LOC100274123 [Zea mays]
gi|194706634|gb|ACF87401.1| unknown [Zea mays]
gi|413946655|gb|AFW79304.1| hypothetical protein ZEAMMB73_527104 [Zea mays]
Length = 335
Score = 293 bits (749), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 132/207 (63%), Positives = 167/207 (80%)
Query: 61 KPLTFKGEVDIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAK 120
+PL+ GEV +A+R+LR DP LA +IDAH PP F+ PF SL +SILYQQLA+KAA
Sbjct: 80 RPLSAVGEVGVAIRYLRAADPALAAVIDAHEPPVFQCPHRPFHSLVRSILYQQLAFKAAA 139
Query: 121 SIYTRFVALFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIV 180
S+Y+RF+AL GE + PDAVLA++P QLR+IGVS RKASYL DLA KY GILSD +IV
Sbjct: 140 SVYSRFLALLGGESCVAPDAVLALTPHQLRQIGVSPRKASYLHDLARKYASGILSDAAIV 199
Query: 181 EMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGAL 240
MDD ++ MLT VKGIG+WSVHMFMIFSL +PDVLP DLGVRKG+Q+LY L+++P
Sbjct: 200 NMDDRSLAAMLTMVKGIGSWSVHMFMIFSLARPDVLPSADLGVRKGVQMLYALEDVPRPS 259
Query: 241 KMEEVCEKWKPYRSVGSWYMWRLMEAK 267
+M+++CE+W+PYRSVG+WYMWRL+E+K
Sbjct: 260 QMDKLCERWRPYRSVGAWYMWRLIESK 286
>gi|357132394|ref|XP_003567815.1| PREDICTED: probable DNA-3-methyladenine glycosylase 2-like
[Brachypodium distachyon]
Length = 323
Score = 291 bits (746), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 135/207 (65%), Positives = 164/207 (79%)
Query: 61 KPLTFKGEVDIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAK 120
+PL+ GEV A+RHLR D LA +IDAH PP F PF SL +SILYQQLA+KAA
Sbjct: 66 RPLSADGEVAAAIRHLRAADTALAPVIDAHDPPVFHCPHRPFHSLVRSILYQQLAFKAAA 125
Query: 121 SIYTRFVALFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIV 180
S+Y+RF+AL GE +LPDAVL++S QLR+IGVS RKASYL DLA KY GILSD S+V
Sbjct: 126 SVYSRFLALLGGEPQVLPDAVLSLSEDQLRQIGVSPRKASYLHDLARKYASGILSDTSVV 185
Query: 181 EMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGAL 240
MDD ++ MLT VKGIGAWSVHMFMIFSL +PDVLP DLGVRKG+Q+LYGL ++P
Sbjct: 186 AMDDRSLASMLTMVKGIGAWSVHMFMIFSLARPDVLPSADLGVRKGVQLLYGLDDVPRPS 245
Query: 241 KMEEVCEKWKPYRSVGSWYMWRLMEAK 267
+ME++CE+W+PYRSVG+WYMWRL+E+K
Sbjct: 246 QMEKLCERWRPYRSVGAWYMWRLIESK 272
>gi|326498089|dbj|BAJ94907.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 325
Score = 291 bits (746), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 134/208 (64%), Positives = 167/208 (80%)
Query: 61 KPLTFKGEVDIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAK 120
+PL+ GEV+ A+RHLR DP LA +ID H P+F PF SLA+SILYQQLA+KAA
Sbjct: 66 RPLSADGEVEAAIRHLRVADPALAPVIDTHELPSFHCPHPPFHSLARSILYQQLAFKAAA 125
Query: 121 SIYTRFVALFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIV 180
S+Y+RF+AL GE +LPDAVLA+S +QLR+IGVS RKASYL DLA KY GILSD+SIV
Sbjct: 126 SVYSRFIALVGGEAGVLPDAVLALSAEQLRQIGVSARKASYLHDLARKYASGILSDDSIV 185
Query: 181 EMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGAL 240
MDD ++ MLT V GIGAWSVHMFMI+SL +PDVLP DLGVRKG+Q+LYGL+++P
Sbjct: 186 AMDDRSLAAMLTMVNGIGAWSVHMFMIYSLARPDVLPSADLGVRKGVQMLYGLEDVPRPS 245
Query: 241 KMEEVCEKWKPYRSVGSWYMWRLMEAKG 268
+ME++CE+W+PYRSV +WYMWRL+E+K
Sbjct: 246 QMEKLCERWRPYRSVAAWYMWRLIESKA 273
>gi|359475178|ref|XP_003631611.1| PREDICTED: probable DNA-3-methyladenine glycosylase 2-like [Vitis
vinifera]
Length = 273
Score = 269 bits (688), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 135/261 (51%), Positives = 178/261 (68%), Gaps = 23/261 (8%)
Query: 10 NISQNPSASSKITFPPRKIRKLTT-ITPITKIAEIPVATAISTNSDNSPKIFKPLTFKGE 68
++ +NPS P K RKL++ +P T +P+ +S++
Sbjct: 15 SLPENPS--------PAKSRKLSSHSSPRTAAILLPITRLLSSDD--------------V 52
Query: 69 VDIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVA 128
V ALRHLR DP+LA +IDA+ PP FE+S +PFL+LAKSILYQQ+ +KA +IY RFV+
Sbjct: 53 VAAALRHLRSSDPVLAPVIDAYEPPKFENSDTPFLALAKSILYQQITHKAGTTIYNRFVS 112
Query: 129 LFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMF 188
L GE + P +VLA++P QL +IGVS RK S+L DLA KY GILSD I+ M+D +
Sbjct: 113 LCGGETRVCPISVLALTPPQLLQIGVSARKVSFLHDLANKYRTGILSDSKILTMEDRALV 172
Query: 189 KMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEK 248
++ VKG G SVHMFMIFSLH+PDVLPVGD +RKG+Q+LYGL+ELP +ME++CE+
Sbjct: 173 SLIAMVKGFGVLSVHMFMIFSLHRPDVLPVGDANLRKGVQMLYGLEELPRPSQMEKLCER 232
Query: 249 WKPYRSVGSWYMWRLMEAKGV 269
W+PYRSV SWY+WRL EA GV
Sbjct: 233 WRPYRSVASWYIWRLSEANGV 253
>gi|297741468|emb|CBI32599.3| unnamed protein product [Vitis vinifera]
Length = 364
Score = 269 bits (688), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 135/261 (51%), Positives = 178/261 (68%), Gaps = 23/261 (8%)
Query: 10 NISQNPSASSKITFPPRKIRKLTT-ITPITKIAEIPVATAISTNSDNSPKIFKPLTFKGE 68
++ +NPS P K RKL++ +P T +P+ +S++
Sbjct: 98 SLPENPS--------PAKSRKLSSHSSPRTAAILLPITRLLSSDD--------------V 135
Query: 69 VDIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVA 128
V ALRHLR DP+LA +IDA+ PP FE+S +PFL+LAKSILYQQ+ +KA +IY RFV+
Sbjct: 136 VAAALRHLRSSDPVLAPVIDAYEPPKFENSDTPFLALAKSILYQQITHKAGTTIYNRFVS 195
Query: 129 LFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMF 188
L GE + P +VLA++P QL +IGVS RK S+L DLA KY GILSD I+ M+D +
Sbjct: 196 LCGGETRVCPISVLALTPPQLLQIGVSARKVSFLHDLANKYRTGILSDSKILTMEDRALV 255
Query: 189 KMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEK 248
++ VKG G SVHMFMIFSLH+PDVLPVGD +RKG+Q+LYGL+ELP +ME++CE+
Sbjct: 256 SLIAMVKGFGVLSVHMFMIFSLHRPDVLPVGDANLRKGVQMLYGLEELPRPSQMEKLCER 315
Query: 249 WKPYRSVGSWYMWRLMEAKGV 269
W+PYRSV SWY+WRL EA GV
Sbjct: 316 WRPYRSVASWYIWRLSEANGV 336
>gi|115465503|ref|NP_001056351.1| Os05g0567500 [Oryza sativa Japonica Group]
gi|51854286|gb|AAU10667.1| unknown protein [Oryza sativa Japonica Group]
gi|113579902|dbj|BAF18265.1| Os05g0567500 [Oryza sativa Japonica Group]
gi|215706409|dbj|BAG93265.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215768106|dbj|BAH00335.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222632592|gb|EEE64724.1| hypothetical protein OsJ_19580 [Oryza sativa Japonica Group]
Length = 290
Score = 227 bits (578), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 130/256 (50%), Positives = 163/256 (63%), Gaps = 18/256 (7%)
Query: 18 SSKITFPPRKIRKLTTITPITKIAEIPVATAISTNSDNSPKIFKPLTFKGEVDIALRHLR 77
+ KI+F RKI K T + A +T + SP PL+ GE+ AL HLR
Sbjct: 26 AGKISFRSRKIVKSTPAKGKS--------VATTTTAVLSPP---PLSSPGELAAALSHLR 74
Query: 78 DKDPLLATLIDAHRPPTFESS--RSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDN 135
DPLL+ +I + P F SS R F SLA SIL+QQLA AA +IY RF+AL +
Sbjct: 75 TADPLLSEVISSTGAPAFISSPSRPAFHSLAHSILHQQLAPSAAAAIYARFLALIPAAAD 134
Query: 136 IL-----PDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKM 190
P AVLA+S LR IGVS RKA+YL DLA ++ G LS+ ++ MD+ +
Sbjct: 135 PDAAVVNPAAVLALSAADLRAIGVSARKAAYLHDLAGRFAAGELSESAVAAMDEAALLAE 194
Query: 191 LTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWK 250
LT VKG+G W+VHMFMIFSLH+PDVLP GDLGVRKG+Q LYGL LP +M +CE+W+
Sbjct: 195 LTKVKGVGEWTVHMFMIFSLHRPDVLPSGDLGVRKGVQELYGLPALPKPEEMAALCERWR 254
Query: 251 PYRSVGSWYMWRLMEA 266
PYRSVG+WYMWRLME+
Sbjct: 255 PYRSVGAWYMWRLMES 270
>gi|125553355|gb|EAY99064.1| hypothetical protein OsI_21021 [Oryza sativa Indica Group]
Length = 289
Score = 226 bits (577), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 130/256 (50%), Positives = 163/256 (63%), Gaps = 18/256 (7%)
Query: 18 SSKITFPPRKIRKLTTITPITKIAEIPVATAISTNSDNSPKIFKPLTFKGEVDIALRHLR 77
+ KI+F RKI K T + A +T + SP PL+ GE+ AL HLR
Sbjct: 25 AGKISFRSRKIVKSTPAKGKS--------VATTTTAVLSPP---PLSSPGELAAALSHLR 73
Query: 78 DKDPLLATLIDAHRPPTFESS--RSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDN 135
DPLL+ +I + P F SS R F SLA SIL+QQLA AA +IY RF+AL +
Sbjct: 74 TADPLLSEVIASTGAPAFISSPSRPAFHSLAHSILHQQLAPSAAAAIYARFLALIPAAAD 133
Query: 136 IL-----PDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKM 190
P AVLA+S LR IGVS RKA+YL DLA ++ G LS+ ++ MD+ +
Sbjct: 134 PDAAVVNPAAVLALSAADLRAIGVSARKAAYLHDLAGRFAAGELSESAVAAMDEAALLAE 193
Query: 191 LTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWK 250
LT VKG+G W+VHMFMIFSLH+PDVLP GDLGVRKG+Q LYGL LP +M +CE+W+
Sbjct: 194 LTKVKGVGEWTVHMFMIFSLHRPDVLPSGDLGVRKGVQELYGLPALPKPEEMAALCERWR 253
Query: 251 PYRSVGSWYMWRLMEA 266
PYRSVG+WYMWRLME+
Sbjct: 254 PYRSVGAWYMWRLMES 269
>gi|226493015|ref|NP_001151950.1| DNA-3-methyladenine glycosylase 1 [Zea mays]
gi|195651307|gb|ACG45121.1| DNA-3-methyladenine glycosylase 1 [Zea mays]
gi|413946575|gb|AFW79224.1| DNA-3-methyladenine glycosylase 1 [Zea mays]
Length = 291
Score = 224 bits (572), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 128/285 (44%), Positives = 163/285 (57%), Gaps = 22/285 (7%)
Query: 1 MKKPNHTSDNISQNPSA-----SSKITFPPRKIRKLTTITPITKIAEIPVATAISTNSDN 55
M +P + ++ P A SSKI+F RKI K + P+ A A
Sbjct: 1 MGRPARSRSPATEPPPAVTGLRSSKISFRSRKIVKTASAKPLATTALALAPQAPPPPVLP 60
Query: 56 SPKIFKPLTFKGEVDIALRHLRDKDPLLATLIDAHRPPTFESSRS--PFLSLAKSILYQQ 113
+ L+ GE+ ALRHL+ DPLL +I PTF ++ S F SLA+SILYQQ
Sbjct: 61 A------LSSPGELAAALRHLQAADPLLTAVIANTEAPTFTATPSLPAFHSLARSILYQQ 114
Query: 114 LAYKAAKSIYTRFVALFNGEDNILPDAVLAVSPQQL---------REIGVSYRKASYLRD 164
LA AA +IY RF+AL R IGVS RKASYL D
Sbjct: 115 LATSAADAIYARFLALLPSASAAAAAVAADAVTPAAVLALAAADLRTIGVSGRKASYLHD 174
Query: 165 LAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVR 224
LA ++ G LSD ++ MD+ + LT V+G+G W+VHMFMIFSLH+PD+LP GDLGVR
Sbjct: 175 LAARFAAGELSDSAVAAMDEAALLAELTKVRGVGEWTVHMFMIFSLHRPDILPCGDLGVR 234
Query: 225 KGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSWYMWRLMEAKGV 269
KG+Q LY LK LP +M +CE+W+PYRSVG+WYMWRLME+KG
Sbjct: 235 KGVQELYKLKSLPNPEEMAALCERWRPYRSVGAWYMWRLMESKGA 279
>gi|242091399|ref|XP_002441532.1| hypothetical protein SORBIDRAFT_09g028800 [Sorghum bicolor]
gi|241946817|gb|EES19962.1| hypothetical protein SORBIDRAFT_09g028800 [Sorghum bicolor]
Length = 293
Score = 218 bits (555), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 116/213 (54%), Positives = 145/213 (68%), Gaps = 13/213 (6%)
Query: 67 GEVDIALRHLRDKDPLLATLIDAHRPPTFESSRS--PFLSLAKSILYQQLAYKAAKSIYT 124
GE+ AL HL+ DPLLA +I + PTF ++ S F SLA+SILYQQLA AA +IY
Sbjct: 66 GELAAALSHLQAADPLLAAVIASTEAPTFAATPSLPAFHSLARSILYQQLAPSAADAIYA 125
Query: 125 RFVALFNGED-----------NILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGI 173
RF+AL + P AVLA++ LR IGVS RKASYL DLA ++ G
Sbjct: 126 RFLALLPSASAAAANVAADAVTVTPAAVLALAAADLRTIGVSGRKASYLHDLAARFAAGE 185
Query: 174 LSDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGL 233
LSD ++ MD+ + LT V+G+G W+VHMFMIFSLH+PDVLP GDLGVRKG+Q LY L
Sbjct: 186 LSDSAVAAMDEAALLAELTKVRGVGEWTVHMFMIFSLHRPDVLPCGDLGVRKGVQELYNL 245
Query: 234 KELPGALKMEEVCEKWKPYRSVGSWYMWRLMEA 266
K LP +M +CE+W+PYRSVG+WYMWRLME+
Sbjct: 246 KGLPNPEEMVALCERWRPYRSVGAWYMWRLMES 278
>gi|326503800|dbj|BAK02686.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 277
Score = 206 bits (525), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 123/260 (47%), Positives = 162/260 (62%), Gaps = 11/260 (4%)
Query: 6 HTSDNISQNPSASSKITFPPRKIRKLTTITPITKIAEIPVATAISTNSDNSPKIFKPLTF 65
H S + + +++I+F RKI K TP K+ P+A A + L+
Sbjct: 11 HPSATATATATTTARISFRSRKIVK----TPPAKVK--PLAAATVPPQAPPAPVLPALSA 64
Query: 66 KGEVDIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTR 125
GE+ ALRHL DPLL+ +I + P F S+ S L SILYQQLA + +IY R
Sbjct: 65 PGELAAALRHLAAADPLLSEVIASTDAPAFISTSS----LPCSILYQQLATSSTAAIYAR 120
Query: 126 FVALFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDV 185
F+ + + ++ P A+LA + LR IGVS RKA+YL DLA + G LS+ S+ MD+
Sbjct: 121 FLP-SDADGSVSPAAMLAFAVANLRAIGVSGRKAAYLHDLAASFAAGYLSESSVAAMDED 179
Query: 186 TMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEV 245
+ LT VKGIG W+VHMFMIFSLH+PDVLP GDLGVRKG+Q LY LK LP +M +
Sbjct: 180 ALLAQLTRVKGIGEWTVHMFMIFSLHRPDVLPSGDLGVRKGVQELYKLKALPKPEEMAAL 239
Query: 246 CEKWKPYRSVGSWYMWRLME 265
CE+W+PYRSVG+WYMWRL+E
Sbjct: 240 CERWRPYRSVGAWYMWRLLE 259
>gi|168003596|ref|XP_001754498.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694119|gb|EDQ80468.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 205
Score = 204 bits (518), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 98/196 (50%), Positives = 131/196 (66%), Gaps = 1/196 (0%)
Query: 72 ALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFN 131
A +HL D LA +I P FE+ + F +L +SI+ QQLA KAA +I+ R VAL
Sbjct: 10 ATKHLLAADANLACVIQKSNSPPFENDGNSFAALVRSIVSQQLAVKAAATIHARLVALCG 69
Query: 132 GEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVT-MFKM 190
G + P A+ A++ +LR G+S RK YL DLA+K G LSDE ++ M+D +
Sbjct: 70 GPQKVTPAAIAALTAGELRGAGISGRKEVYLHDLADKLVSGALSDEKLMAMEDEDDLVTA 129
Query: 191 LTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWK 250
LT+VKGIG WS HMFMIF LH+PDVLPVGDLG+RKG Q L+ LK LP A +M ++ + W+
Sbjct: 130 LTAVKGIGVWSAHMFMIFHLHRPDVLPVGDLGIRKGFQKLFHLKHLPCAEEMHKLADSWR 189
Query: 251 PYRSVGSWYMWRLMEA 266
PYRS+ SWY+W+L +A
Sbjct: 190 PYRSLASWYLWQLKDA 205
>gi|168038932|ref|XP_001771953.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676735|gb|EDQ63214.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 178
Score = 187 bits (475), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 84/178 (47%), Positives = 127/178 (71%), Gaps = 2/178 (1%)
Query: 95 FESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNILPDAVLAVSPQQLREIGV 154
+E + F +LA+SI+YQQ++ KAA +IY R +++ G +++ P + A++ ++LR +G+
Sbjct: 2 WEQEGTCFTALARSIVYQQISGKAACAIYCRLISICGGLESVTPPVIAALTVEELRAVGI 61
Query: 155 SYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPD 214
S RK YL DLAEK+T G+LS+ ++ M++ + K LT+VKGIG WS HMFMIF L KPD
Sbjct: 62 SGRKGLYLHDLAEKFTSGLLSEAKLIIMNEDDLVKALTAVKGIGVWSAHMFMIFYLRKPD 121
Query: 215 VLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSWYMWRLMEAKGVLPN 272
VLPVGDL +RK Q LY L +LP +M+E+ W+PYR++ SWY+WR+ + +LP+
Sbjct: 122 VLPVGDLAIRKAFQKLYHLNQLPSPAEMQELAFPWRPYRTLASWYLWRMTD--NMLPD 177
>gi|262196681|ref|YP_003267890.1| DNA-3-methyladenine glycosylase II [Haliangium ochraceum DSM 14365]
gi|262080028|gb|ACY15997.1| DNA-3-methyladenine glycosylase II [Haliangium ochraceum DSM 14365]
Length = 220
Score = 183 bits (465), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 101/206 (49%), Positives = 130/206 (63%), Gaps = 2/206 (0%)
Query: 62 PLTFKGEVDIA--LRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAA 119
P + + +DIA L HLR + LI H PP +R+ F SL ++I+YQQLA +AA
Sbjct: 9 PASAQPVLDIAASLVHLRGTGAHMPALIAVHGPPDLARTRNSFASLGRAIVYQQLATRAA 68
Query: 120 KSIYTRFVALFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESI 179
+IY RF+ALF P A+LAVS LR G+S KA+ LRDLA K+ DG +
Sbjct: 69 AAIYARFLALFPRGRFPTPAALLAVSEDTLRSAGLSRAKATALRDLAAKFADGSVRSRQF 128
Query: 180 VEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGA 239
MD + LT V+GIG WSV MF+IF L +PDVLPVGDLGVRKG+Q + L+ELP
Sbjct: 129 SRMDADELRATLTQVRGIGPWSVDMFLIFGLMRPDVLPVGDLGVRKGMQRYFELEELPKP 188
Query: 240 LKMEEVCEKWKPYRSVGSWYMWRLME 265
+M+E+ W P+RSV SWYMWR+ E
Sbjct: 189 AEMQELAAPWAPFRSVASWYMWRVAE 214
>gi|384254210|gb|EIE27684.1| DNA glycosylase [Coccomyxa subellipsoidea C-169]
Length = 208
Score = 179 bits (454), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 90/185 (48%), Positives = 120/185 (64%), Gaps = 3/185 (1%)
Query: 82 LLATLIDAHRPPTF---ESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNILP 138
+LA LI H P + S F LA I+ QQL+ AAK I R +A G + P
Sbjct: 4 VLAALIKEHGVPDKLLPTGTDSAFHGLAHIIIDQQLSILAAKCIANRVLAACGGAQVLEP 63
Query: 139 DAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIG 198
AVL V P +LR G+S K +Y+ DLA+++ G L+ E IV +DD T+++ L++VKGIG
Sbjct: 64 AAVLKVPPTELRACGLSQAKTNYIVDLAQRFESGQLTTEGIVALDDDTLYQQLSAVKGIG 123
Query: 199 AWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSW 258
WSV MF +F +PD+LPVGDL VRKG Q LYGLK +P +M E+ EKW+PYRS+GS+
Sbjct: 124 RWSVDMFAMFHAGRPDILPVGDLAVRKGFQALYGLKAIPTDAQMAEISEKWRPYRSLGSY 183
Query: 259 YMWRL 263
YMWR+
Sbjct: 184 YMWRV 188
>gi|300866658|ref|ZP_07111344.1| Base excision DNA repair protein, HhH-GPD family [Oscillatoria sp.
PCC 6506]
gi|300335332|emb|CBN56504.1| Base excision DNA repair protein, HhH-GPD family [Oscillatoria sp.
PCC 6506]
Length = 207
Score = 171 bits (432), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 90/198 (45%), Positives = 124/198 (62%), Gaps = 3/198 (1%)
Query: 71 IALRHLRDKDPLLATLID---AHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFV 127
IA+ +L+D DP+L LID + E F L++SIL+QQL+ K AK I+ RF+
Sbjct: 5 IAIDYLKDSDPILGQLIDQVGGCQLNQRELEGDLFFCLSQSILHQQLSTKVAKVIHARFL 64
Query: 128 ALFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTM 187
L+ L VL + LR++G+S K SYL+DLA +G+ + E + MDD ++
Sbjct: 65 QLYANTQFPLAQDVLDTPDEVLRQVGISRPKISYLKDLARHAIEGLPTIEELEIMDDESI 124
Query: 188 FKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCE 247
K LT VKGIG WSV MF+IF L++ DVLPV DLG+R G++ LYGL LP E + +
Sbjct: 125 IKNLTRVKGIGRWSVQMFLIFRLNRWDVLPVDDLGIRSGIRKLYGLDALPDRKTTERLGQ 184
Query: 248 KWKPYRSVGSWYMWRLME 265
KWKPY S+ SWY+WR +E
Sbjct: 185 KWKPYCSIASWYLWRSLE 202
>gi|427720935|ref|YP_007068929.1| HhH-GPD family protein [Calothrix sp. PCC 7507]
gi|427353371|gb|AFY36095.1| HhH-GPD family protein [Calothrix sp. PCC 7507]
Length = 203
Score = 167 bits (424), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 84/197 (42%), Positives = 128/197 (64%), Gaps = 3/197 (1%)
Query: 72 ALRHLRDKDPLLATLID---AHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVA 128
A+ L+ D +LA +I+ + + + F SL++SILYQQL+ KAA +I+ RF+
Sbjct: 6 AIAALKTSDRILAPIIEQIGVCQLDQVQQTGDLFYSLSRSILYQQLSGKAAAAIHHRFLQ 65
Query: 129 LFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMF 188
L+ E P+AVL + + LR +G+S K YL+DLA+ +G+ + + M+D +
Sbjct: 66 LYADEPFPTPEAVLNTTDETLRGVGISRPKVVYLKDLAQNILNGLPTLTELEAMEDEAII 125
Query: 189 KMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEK 248
K+LT VKGIG W+V M +IF LH+PDVLPV DLG+R G++ +Y L ELP +E++ ++
Sbjct: 126 KILTQVKGIGRWTVQMLLIFRLHRPDVLPVDDLGIRSGIRRIYSLPELPDKKTVEKLGQQ 185
Query: 249 WKPYRSVGSWYMWRLME 265
WKPY +V SWY+WR +E
Sbjct: 186 WKPYCTVASWYIWRSLE 202
>gi|255073031|ref|XP_002500190.1| predicted protein [Micromonas sp. RCC299]
gi|226515452|gb|ACO61448.1| predicted protein [Micromonas sp. RCC299]
Length = 291
Score = 165 bits (417), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 93/256 (36%), Positives = 144/256 (56%), Gaps = 21/256 (8%)
Query: 15 PSASSKITFPPRKIRKLTTITPIT-KIAEIPVATAISTNSDNSPKIFKPLTFKGEVDIAL 73
P+ S + PR +R + + ++ VA A+ S PK+ + + GE+
Sbjct: 9 PATPSPVKPGPRTVRVEAAVPDVDGTFGDVVVADALRELSTRDPKLGELIARCGEL---- 64
Query: 74 RHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGE 133
P + +A R E +R+ F SLA++I++QQL AA +I+ R + +
Sbjct: 65 -------PRIFACQEARRA-KHEPNRA-FRSLARAIVFQQLNGTAAATIFGRVLRCVGAQ 115
Query: 134 DNIL---PDAVLAVSPQQLREIGVSYRKASYLRDLAEKY----TDGILSDESIVEMDDVT 186
D++L PDA++ +R G+S RK YL LA + +D LSDES+ MDD
Sbjct: 116 DDVLALTPDAIIDADEAAMRACGLSQRKHEYLVALARAFHPAHSDFPLSDESLEAMDDTA 175
Query: 187 MFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVC 246
+ L +++GIG WSVHMF +F L++PDVLP D GVRKG+ LYGL+++P K+EE+
Sbjct: 176 VMSALVALRGIGPWSVHMFQMFYLNRPDVLPTKDFGVRKGVMRLYGLRDMPSEAKVEEIA 235
Query: 247 EKWKPYRSVGSWYMWR 262
E+WKP+R++ S YMW+
Sbjct: 236 ERWKPHRTLASMYMWQ 251
>gi|384494008|gb|EIE84499.1| hypothetical protein RO3G_09209 [Rhizopus delemar RA 99-880]
Length = 195
Score = 165 bits (417), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 80/173 (46%), Positives = 113/173 (65%), Gaps = 9/173 (5%)
Query: 100 SPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNIL---PDAVLAVSPQQLREIGVSY 156
+PF SL ++I+YQQ+ KAA SIYTRF+ LF+ E L P VL S ++LR G+S
Sbjct: 16 NPFRSLVRAIVYQQIHGKAASSIYTRFLKLFDKESEDLFPTPLEVLEKSVEELRSAGLST 75
Query: 157 RKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVL 216
RKA Y+RDLAEK+ + +++ E M D + L +VKGIG W+ MF++F LH PDVL
Sbjct: 76 RKAEYIRDLAEKFNNKLITPEKFNSMSDQEISSQLCTVKGIGQWTADMFLMFDLHHPDVL 135
Query: 217 PVGDLGVRKGLQVLYGL------KELPGALKMEEVCEKWKPYRSVGSWYMWRL 263
PVGDL +RKG+ +GL K P +ME++ + W+PYRS+G W +W++
Sbjct: 136 PVGDLAIRKGVAKHFGLVIPNSKKAFPTLEQMEQLTQIWRPYRSLGCWLLWKI 188
>gi|116625362|ref|YP_827518.1| DNA-3-methyladenine glycosylase II [Candidatus Solibacter usitatus
Ellin6076]
gi|116228524|gb|ABJ87233.1| DNA-3-methyladenine glycosylase II [Candidatus Solibacter usitatus
Ellin6076]
Length = 200
Score = 164 bits (415), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 81/199 (40%), Positives = 123/199 (61%), Gaps = 2/199 (1%)
Query: 72 ALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFN 131
A++HLR DP+L+ +I+ + F +L +SI+YQQL+ + AK I R VA
Sbjct: 4 AVQHLRKSDPVLSAIIERVGAYGIQFREPDFETLVRSIVYQQLSGRVAKVILDRLVAAVG 63
Query: 132 GEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKML 191
E + P+ +LA+ P ++R++G+S +K +Y+RDLA DG L + + D + + L
Sbjct: 64 RE--VTPEKILALRPGRMRKLGLSTQKTAYIRDLARHTRDGRLVFTELPALTDEEVIERL 121
Query: 192 TSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKP 251
T VKGIG W+ MF++F+L + DVLP GDLGVR ++ Y L ELP +MEE+ W+P
Sbjct: 122 TQVKGIGVWTAQMFLMFALRRHDVLPTGDLGVRNAIRKAYDLAELPTPAEMEELARNWRP 181
Query: 252 YRSVGSWYMWRLMEAKGVL 270
+ SV SWY+WR +E + L
Sbjct: 182 WCSVASWYLWRSLEGQADL 200
>gi|406834601|ref|ZP_11094195.1| HhH-GPD family protein [Schlesneria paludicola DSM 18645]
Length = 217
Score = 163 bits (412), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 85/207 (41%), Positives = 121/207 (58%), Gaps = 1/207 (0%)
Query: 68 EVDIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFV 127
+++ A+RHL+ DP++ +LID P T + +R F L +SIL QQ++ KAA+SI R
Sbjct: 7 KIEAAIRHLKSADPIMNSLIDRAGPFTLKLNRDRFGMLVRSILSQQISTKAARSIRMRLD 66
Query: 128 ALFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTM 187
L + +A++ V+ QLR G+S +K SYLRDL+ +G L E I + D
Sbjct: 67 ELLK-PGRLSAEAIINVTEDQLRSAGLSRQKVSYLRDLSTCVLEGRLRLERIGRLSDEDA 125
Query: 188 FKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCE 247
+ L VKGIG W+ MF+IFSL + DV P DL +R ++ LY L ELP + E+
Sbjct: 126 IEQLIQVKGIGRWTAQMFLIFSLGRLDVFPHDDLIIRSSIKELYELDELPNKQRSHEIAA 185
Query: 248 KWKPYRSVGSWYMWRLMEAKGVLPNVA 274
WKPY SV +WY WRL++ K P A
Sbjct: 186 AWKPYSSVATWYCWRLLDVKAAAPKDA 212
>gi|451979826|ref|ZP_21928235.1| DNA-3-methyladenine glycosylase II [Nitrospina gracilis 3/211]
gi|451762918|emb|CCQ89441.1| DNA-3-methyladenine glycosylase II [Nitrospina gracilis 3/211]
Length = 219
Score = 162 bits (409), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 76/194 (39%), Positives = 121/194 (62%), Gaps = 1/194 (0%)
Query: 73 LRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNG 132
LRH +DP++A +I P +R+ F L K+I+ QQ++ + A IY RF ALF+G
Sbjct: 22 LRHFDRQDPVMAAVIRQIGPMRLRRNRNYFQVLCKAIVGQQISTRVADVIYARFQALFDG 81
Query: 133 EDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLT 192
+ PD V AV +LR +G+S +KA+YL DL+ ++ D + + +++ + + LT
Sbjct: 82 KQPT-PDRVAAVPADRLRTVGLSRQKAAYLHDLSARFIDKTIRPHQLNYLENEAIIERLT 140
Query: 193 SVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPY 252
+V GIG W+ MF+IFSL++ DVLPV DLG+R ++ +YGL E+P A ++ + E W P
Sbjct: 141 AVHGIGRWTAEMFLIFSLNRMDVLPVDDLGLRAAVKTIYGLPEMPKAKQLRSLAEPWHPL 200
Query: 253 RSVGSWYMWRLMEA 266
+V +WY WR ++
Sbjct: 201 ETVATWYAWRTLDG 214
>gi|428208141|ref|YP_007092494.1| HhH-GPD family protein [Chroococcidiopsis thermalis PCC 7203]
gi|428010062|gb|AFY88625.1| HhH-GPD family protein [Chroococcidiopsis thermalis PCC 7203]
Length = 244
Score = 160 bits (404), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 83/200 (41%), Positives = 127/200 (63%), Gaps = 8/200 (4%)
Query: 71 IALRHLRDKDPLLATLID---AHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFV 127
+A+ L DP+LATLI R + + F SL+K+I++QQL+ K+A +I+ RF+
Sbjct: 5 VAIAALTKSDPILATLIHQVGTCRLDRVQQTGDLFFSLSKAIIHQQLSTKSATAIHQRFL 64
Query: 128 ALFNGEDNILPDA--VLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDV 185
+ + LP A +L + LR +G+S K YL+DLA K T+G+ + + MDD
Sbjct: 65 KISPAQ---LPSALDILNTPDEVLRGVGISRPKIVYLKDLAAKVTNGLPTIAELELMDDE 121
Query: 186 TMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEV 245
T+ + LT VKGIG W+V M +IF LH+ DVLP+ DLG+R G++ +Y L ELP +E++
Sbjct: 122 TIVQTLTQVKGIGRWTVQMLLIFRLHRWDVLPIDDLGIRAGVRKVYNLAELPHRKTVEQL 181
Query: 246 CEKWKPYRSVGSWYMWRLME 265
++WKPY ++ SWY+WR +E
Sbjct: 182 GQQWKPYCTIASWYLWRSLE 201
>gi|444918607|ref|ZP_21238673.1| DNA-3-methyladenine glycosylase II [Cystobacter fuscus DSM 2262]
gi|444709655|gb|ELW50660.1| DNA-3-methyladenine glycosylase II [Cystobacter fuscus DSM 2262]
Length = 232
Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 85/189 (44%), Positives = 114/189 (60%), Gaps = 3/189 (1%)
Query: 80 DPLLATLIDAHRPPTFE--SSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNIL 137
DPLL L+ P E + +PF++LA+SI YQQL KAA +I+ R
Sbjct: 37 DPLLGALMKQVGPLRLEVEALHNPFVALARSIAYQQLTGKAAATIFGRVCERVGQGARFT 96
Query: 138 PDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDG-ILSDESIVEMDDVTMFKMLTSVKG 196
P+AVLAV + LR G+S KA+ +RDLA K +G + + M D + + LT V+G
Sbjct: 97 PEAVLAVPVEDLRAAGLSGAKAAAMRDLALKAREGEVPTLVRARRMSDAALVEHLTKVRG 156
Query: 197 IGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVG 256
IG W+V M +IF L +PDVLPV D GVRKG YGL E+P A ++ E+W+P+RSV
Sbjct: 157 IGQWTVEMMLIFRLGRPDVLPVDDYGVRKGFMRTYGLAEMPRARELLAHGERWRPWRSVA 216
Query: 257 SWYMWRLME 265
SWYMWR +E
Sbjct: 217 SWYMWRALE 225
>gi|434404747|ref|YP_007147632.1| 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase
[Cylindrospermum stagnale PCC 7417]
gi|428259002|gb|AFZ24952.1| 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase
[Cylindrospermum stagnale PCC 7417]
Length = 249
Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 83/190 (43%), Positives = 120/190 (63%), Gaps = 3/190 (1%)
Query: 79 KDPLLATLIDA---HRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDN 135
KDP+LAT+I+ + + + F SL+++ILYQQL+ K+A +I+ RF+ L+ +
Sbjct: 59 KDPILATVIEQVGDCKLDQVQPTGDLFFSLSRAILYQQLSGKSAAAIHRRFLELYAEQPF 118
Query: 136 ILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVK 195
P+A+L LR +G+S K YL+DL++K DG+ S + M+D + + LT VK
Sbjct: 119 PTPEAILNTPDAILRGVGISRPKIVYLKDLSQKIIDGLPSLAELEVMEDEAIIQTLTQVK 178
Query: 196 GIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSV 255
GIG W+V M +IF LH+ DVLPV DLGVR G++ LY L ELP +E KWKPY +V
Sbjct: 179 GIGRWTVQMMLIFRLHRLDVLPVDDLGVRSGIRRLYALPELPDKKTVEHFGLKWKPYCTV 238
Query: 256 GSWYMWRLME 265
SWY+W+ E
Sbjct: 239 ASWYLWQSAE 248
>gi|408403257|ref|YP_006861240.1| DNA-3-methyladenine glycosylase II [Candidatus Nitrososphaera
gargensis Ga9.2]
gi|408363853|gb|AFU57583.1| putative DNA-3-methyladenine glycosylase II [Candidatus
Nitrososphaera gargensis Ga9.2]
Length = 214
Score = 158 bits (400), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 86/199 (43%), Positives = 122/199 (61%), Gaps = 3/199 (1%)
Query: 72 ALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFN 131
AL+HL D LA +I + + + PF SL ++I+YQQLA AA +IY RFV ++
Sbjct: 17 ALKHLAAADARLAAIIKSVGAYEIKLRKDPFQSLVEAIIYQQLAGSAADAIYGRFVKIYG 76
Query: 132 GEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKML 191
P +LA +LR G+S RK YL+DL+ + +D L + +M D + + L
Sbjct: 77 RFPR--PAQLLATPDSKLRACGLSARKIEYLKDLSSQVSDDRLKLALLPKMPDEQVIEQL 134
Query: 192 TSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKP 251
VKGIG W+ MF+IF L +PDVLPVGDLG+RK +Q +Y L ELP +M E+ + WKP
Sbjct: 135 VQVKGIGRWTAEMFLIFCLGRPDVLPVGDLGLRKAMQQVYSLAELPSPARMREIAQLWKP 194
Query: 252 YRSVGSWYMWRLMEA-KGV 269
Y S+ +WYMW+ +E KG+
Sbjct: 195 YSSIATWYMWKSLEKFKGI 213
>gi|383453578|ref|YP_005367567.1| putative DNA-3-methyladenine glycosylase [Corallococcus coralloides
DSM 2259]
gi|380734936|gb|AFE10938.1| putative DNA-3-methyladenine glycosylase [Corallococcus coralloides
DSM 2259]
Length = 231
Score = 158 bits (399), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 87/194 (44%), Positives = 112/194 (57%), Gaps = 3/194 (1%)
Query: 72 ALRHLRDKDPLLATLIDAHRPPTFESS--RSPFLSLAKSILYQQLAYKAAKSIYTRFVAL 129
A R L DP+L TL P FE S SPF +LA SI+YQQL +AA +I+ R
Sbjct: 23 ARRALVRADPILGTLFKTIGPFRFERSPLHSPFEALAHSIVYQQLHGRAAATIFGRVCER 82
Query: 130 FNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVE-MDDVTMF 188
P +LA+ LRE G+S K ++DLA K DG + + V M D +
Sbjct: 83 VGQGKGFTPQKLLALPDATLREAGLSANKLLAIQDLARKTVDGTVPPLARVRRMSDADLI 142
Query: 189 KMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEK 248
+ LT V+GIG W+V M +IF L +PD+LPV D GVRKG VL+GLKE P + E+
Sbjct: 143 EHLTQVRGIGQWTVEMLLIFRLGRPDILPVDDYGVRKGFMVLHGLKEQPKPKALLAYGER 202
Query: 249 WKPYRSVGSWYMWR 262
W+PYRSV SWY+WR
Sbjct: 203 WRPYRSVVSWYLWR 216
>gi|442318671|ref|YP_007358692.1| DNA-3-methyladenine glycosylase [Myxococcus stipitatus DSM 14675]
gi|441486313|gb|AGC43008.1| DNA-3-methyladenine glycosylase [Myxococcus stipitatus DSM 14675]
Length = 229
Score = 156 bits (395), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 78/167 (46%), Positives = 105/167 (62%), Gaps = 1/167 (0%)
Query: 100 SPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNILPDAVLAVSPQQLREIGVSYRKA 159
SPF +LA+SI+YQQL KAA +I+ R P A+LA + +LRE G+S K
Sbjct: 55 SPFAALAESIVYQQLHGKAAAAIFGRVCERVGKGRRFTPQALLATADTELREAGLSANKL 114
Query: 160 SYLRDLAEKYTDGILSDESIV-EMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPV 218
+ L+DLA K DG + + V +M+D + + T V+GIG W+V M +IF L +PDVLPV
Sbjct: 115 AALQDLARKSLDGTVPPLARVRKMEDAELIEHCTQVRGIGQWTVEMLLIFRLGRPDVLPV 174
Query: 219 GDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSWYMWRLME 265
D GVRKG + YGL E+P + E E+W+P+RSV SWYMWR E
Sbjct: 175 DDFGVRKGFMLTYGLPEMPRPKTVLEFGERWRPWRSVASWYMWRATE 221
>gi|443320599|ref|ZP_21049689.1| HhH-GPD superfamily base excision DNA repair protein [Gloeocapsa
sp. PCC 73106]
gi|442789670|gb|ELR99313.1| HhH-GPD superfamily base excision DNA repair protein [Gloeocapsa
sp. PCC 73106]
Length = 206
Score = 156 bits (395), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 69/194 (35%), Positives = 124/194 (63%), Gaps = 3/194 (1%)
Query: 72 ALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFN 131
A+ +L +D ++A LI + T ++ + F +L ++I+ QQ++ K+A +I+ RF +L
Sbjct: 10 AIAYLGSRDRIMAELISTYPAETLQNQDNAFYTLTRAIVGQQISVKSADAIWQRFASLL- 68
Query: 132 GEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKML 191
D+ P+A L + P LR+ G+S +K Y+R++A + G+L+ + +M D + K L
Sbjct: 69 --DSFTPEAYLQLEPDCLRQCGLSRQKVEYMRNIALAWQQGLLTPVAWDKMSDQEIAKQL 126
Query: 192 TSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKP 251
++GIG W+ MF+IF LH+PD+LP+GD+G+ K +Q+ YG +L ++ E+ W+P
Sbjct: 127 MGIRGIGTWTAEMFLIFHLHRPDILPLGDIGLIKAIQLHYGQNQLLSKAQILEIARMWQP 186
Query: 252 YRSVGSWYMWRLME 265
YR+V +WY+WR ++
Sbjct: 187 YRTVATWYLWRSLD 200
>gi|335419362|ref|ZP_08550416.1| DNA-3-methyladenine glycosylase II [Salinisphaera shabanensis
E1L3A]
gi|335420966|ref|ZP_08551996.1| DNA-3-methyladenine glycosylase II [Salinisphaera shabanensis
E1L3A]
gi|334893140|gb|EGM31358.1| DNA-3-methyladenine glycosylase II [Salinisphaera shabanensis
E1L3A]
gi|334896848|gb|EGM34992.1| DNA-3-methyladenine glycosylase II [Salinisphaera shabanensis
E1L3A]
Length = 216
Score = 156 bits (395), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 84/208 (40%), Positives = 121/208 (58%), Gaps = 3/208 (1%)
Query: 61 KPLTFKGEVDIALRHLRDKDPLLATLIDAHRP--PTFESSRSPFLSLAKSILYQQLAYKA 118
+P + D A+ HLR DP L L+D P P+ ++ F SL ++I+YQQL+ KA
Sbjct: 8 RPTRLMFDADTAVAHLRAVDPTLGALMDRCEPFAPSTTAAPDVFHSLVRAIVYQQLSGKA 67
Query: 119 AKSIYTRFVALFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDES 178
A +I+ R + G D + LR G+S K L+ LA G L DES
Sbjct: 68 AGTIHRRLLDALGGGDTPGAQRIADADDAALRGAGLSQNKMLSLQALAAAQLAGELPDES 127
Query: 179 IVE-MDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELP 237
+E DD + + ++++GIG W+V M ++F L +PDV+P+ DLGVRKG + YG +ELP
Sbjct: 128 RLEDYDDAELIERYSAIRGIGRWTVEMLLLFHLGRPDVMPIHDLGVRKGYAITYGREELP 187
Query: 238 GALKMEEVCEKWKPYRSVGSWYMWRLME 265
++E CE W+PYRSVGSW+MWR +E
Sbjct: 188 KPKQLERECEIWRPYRSVGSWFMWRALE 215
>gi|108758816|ref|YP_629808.1| DNA-3-methyladenine glycosylase [Myxococcus xanthus DK 1622]
gi|108462696|gb|ABF87881.1| putative DNA-3-methyladenine glycosylase [Myxococcus xanthus DK
1622]
Length = 224
Score = 156 bits (395), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 85/195 (43%), Positives = 112/195 (57%), Gaps = 3/195 (1%)
Query: 74 RHLRDKDPLLATLIDAHRPPTFESS--RSPFLSLAKSILYQQLAYKAAKSIYTRFVALFN 131
R L DP L L+ + P + SPF +LA+SI+YQQL KAA +I+ R
Sbjct: 21 RALSRADPTLGALMKSVGPFRLQVRPLHSPFGALAESIVYQQLHGKAAATIFGRVCERVG 80
Query: 132 GEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVE-MDDVTMFKM 190
P+A+LAV LRE G+S K + L+DLA K DG + + V MDD + +
Sbjct: 81 SGRKFTPEALLAVPDTSLREAGLSANKLAALQDLARKTLDGTVPPLAKVRRMDDAELIEH 140
Query: 191 LTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWK 250
T V+GIG W+V M ++F L +PDVLPV D GVRKG YGL E+P + E+W+
Sbjct: 141 FTQVRGIGQWTVEMLLMFQLERPDVLPVDDYGVRKGFMKAYGLTEMPKPKALLAYGERWR 200
Query: 251 PYRSVGSWYMWRLME 265
P+RSV SWYMWR E
Sbjct: 201 PWRSVASWYMWRSAE 215
>gi|254417495|ref|ZP_05031234.1| base excision DNA repair protein, HhH-GPD family [Coleofasciculus
chthonoplastes PCC 7420]
gi|196175679|gb|EDX70704.1| base excision DNA repair protein, HhH-GPD family [Coleofasciculus
chthonoplastes PCC 7420]
Length = 206
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 85/202 (42%), Positives = 124/202 (61%), Gaps = 7/202 (3%)
Query: 71 IALRHLRDKDPLLATLID---AHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFV 127
IA+ L+D DP+L LID + E F L++SIL+QQL+ K A I++RF+
Sbjct: 5 IAIDFLQDCDPVLGQLIDRIGECQLNQHELEGDLFFCLSRSILHQQLSTKVAHVIHSRFL 64
Query: 128 ALFNGEDNILPDA--VLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDV 185
++ D P A VL + LR +G+S K +YL+DLA DG+ + E++ MDD
Sbjct: 65 QVY--PDTPFPTAQDVLDTPDEVLRGVGISRPKIAYLKDLARHSIDGLPTLEALEVMDDE 122
Query: 186 TMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEV 245
++ K+LT VKGIG W+V M +IF L + DVLPV DLG+R G++ LY L+ LP +
Sbjct: 123 SIIKILTQVKGIGCWTVQMLLIFRLKRWDVLPVDDLGIRTGIRNLYNLEALPDRKTTKRF 182
Query: 246 CEKWKPYRSVGSWYMWRLMEAK 267
++WKPY S+ SWY+WR ++ K
Sbjct: 183 GQRWKPYCSIASWYLWRSLDLK 204
>gi|302035445|ref|YP_003795767.1| DNA-3-methyladenine glycosylase [Candidatus Nitrospira defluvii]
gi|300603509|emb|CBK39839.1| DNA-3-methyladenine glycosylase [Candidatus Nitrospira defluvii]
Length = 225
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 79/199 (39%), Positives = 121/199 (60%), Gaps = 3/199 (1%)
Query: 75 HLRDKDPLLATLIDAHRPP--TFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNG 132
HL DP++ +I P + + RSPF SLA++I YQQL KAA+SI RF+ALF G
Sbjct: 10 HLCKIDPVMKRVIGEVGPYALSLRARRSPFESLARAIAYQQLHDKAAESILKRFIALFPG 69
Query: 133 EDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVE-MDDVTMFKML 191
P +LA++P+ +R G S K + L+DLA K DG + ++++ + D + + L
Sbjct: 70 RRFPRPADLLAMAPETIRGTGFSRAKIAALQDLAAKAMDGTVPTTAVIQRLADDAIVERL 129
Query: 192 TSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKP 251
+V+G+G W+V M +IF L +PDVLPV D GVR G ++ Y K +P ++ E+W+P
Sbjct: 130 IAVRGVGRWTVEMLLIFQLGRPDVLPVDDFGVRNGFRIAYKRKAMPTPKELLVYGERWRP 189
Query: 252 YRSVGSWYMWRLMEAKGVL 270
YR+ +WY+WR + V+
Sbjct: 190 YRTAAAWYLWRAADQAKVV 208
>gi|162449176|ref|YP_001611543.1| methylated-DNA--protein-cysteine methyltransferase [Sorangium
cellulosum So ce56]
gi|161159758|emb|CAN91063.1| methylated-DNA--protein-cysteine methyltransferase [Sorangium
cellulosum So ce56]
Length = 395
Score = 155 bits (391), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 89/202 (44%), Positives = 121/202 (59%), Gaps = 5/202 (2%)
Query: 72 ALRHLRDKDPLLATLIDAHRPPTFESSR--SPFLSLAKSILYQQLAYKAAKSIYTRFVAL 129
A+ HLR D LA +IDA P R S FL+LA+SI+YQQL KAA +I+ R AL
Sbjct: 193 AVEHLRASDAALARVIDAVGPFAMRIDRTSSLFLALAESIVYQQLTGKAAATIFARVRAL 252
Query: 130 F-NGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVE-MDDVTM 187
F + P +L S ++LR G+S K LRDLA K DG L + V M+D +
Sbjct: 253 FPRAHEGPTPAQLLRASDEKLRGAGLSQAKLLALRDLARKTEDGELPTLAEVHGMEDEAI 312
Query: 188 FKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCE 247
+ LT V+GIG W+V M ++F L +PDVLPV D G+RKG + + E P +E+
Sbjct: 313 IERLTRVRGIGRWTVEMLLMFRLGRPDVLPVDDYGIRKGFALAFKRPEPPARADLEKRGA 372
Query: 248 KWKPYRSVGSWYMWRLME-AKG 268
+WKPYR+V SWY+WR ++ A+G
Sbjct: 373 RWKPYRTVASWYLWRAVDLARG 394
>gi|383759016|ref|YP_005438001.1| DNA-3-methyladenine glycosylase II AlkA [Rubrivivax gelatinosus
IL144]
gi|381379685|dbj|BAL96502.1| DNA-3-methyladenine glycosylase II AlkA [Rubrivivax gelatinosus
IL144]
Length = 218
Score = 154 bits (388), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 79/197 (40%), Positives = 116/197 (58%), Gaps = 1/197 (0%)
Query: 70 DIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVAL 129
D A RHL +D ++ LI ES F +LA+SI+ QQ++ KAA+S++ +F AL
Sbjct: 16 DDACRHLSRRDRVMKKLIPRFGEARLESRGDAFTTLARSIVGQQISVKAAQSVWNKFSAL 75
Query: 130 FNG-EDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMF 188
G ++ P AV A+ P +R G+S RK YL DLA + DG + +MDD +
Sbjct: 76 VEGPATHLAPQAVNALDPLTMRAAGLSARKTEYLLDLARHFVDGTVHVADWQQMDDEAII 135
Query: 189 KMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEK 248
L +++GIG W+ MF+IF L +P+VLP+ DLG+ KG+ + Y E + EV E
Sbjct: 136 AELVAIRGIGRWTAEMFLIFHLMRPNVLPLDDLGLLKGISLNYFSGEPVSRAEAREVGEA 195
Query: 249 WKPYRSVGSWYMWRLME 265
W PYRSV +WY+WR ++
Sbjct: 196 WAPYRSVATWYIWRSLD 212
>gi|159478519|ref|XP_001697350.1| hypothetical protein CHLREDRAFT_105620 [Chlamydomonas reinhardtii]
gi|158274508|gb|EDP00290.1| predicted protein [Chlamydomonas reinhardtii]
Length = 179
Score = 153 bits (386), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 75/165 (45%), Positives = 106/165 (64%), Gaps = 3/165 (1%)
Query: 102 FLSLAKSILYQQLAYKAAKSIYTRFVAL--FNGEDNILPDAVLAVSPQQLREIGVSYRKA 159
F +LA+S+ YQQLA KAA +I+ R + + + P +LA P+ LR G+S RK
Sbjct: 10 FSALARSVAYQQLATKAASTIWGRVLGVCQVGSTAALTPAHILAAPPEALRGAGLSGRKL 69
Query: 160 SYLRDLAEKYTDGILSDESIVEMDDV-TMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPV 218
YL LA+ ++ ++ + + DV + LT ++GIG W+VHM + L PDVLP
Sbjct: 70 EYLVGLAQAFSGRPGWEQELEALTDVDALVAQLTPLRGIGEWTVHMIAMMHLGLPDVLPT 129
Query: 219 GDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSWYMWRL 263
GDLGVR+GLQ+LYGL++LP ++EE+ W PYRSVGSWYMWR+
Sbjct: 130 GDLGVRRGLQLLYGLRQLPDVRQVEEITAGWAPYRSVGSWYMWRI 174
>gi|338529870|ref|YP_004663204.1| putative DNA-3-methyladenine glycosylase [Myxococcus fulvus HW-1]
gi|337255966|gb|AEI62126.1| putative DNA-3-methyladenine glycosylase [Myxococcus fulvus HW-1]
Length = 244
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 84/195 (43%), Positives = 110/195 (56%), Gaps = 3/195 (1%)
Query: 74 RHLRDKDPLLATLIDAHRPPTFESS--RSPFLSLAKSILYQQLAYKAAKSIYTRFVALFN 131
R L DP L L+ P + SPF +LA+SI+YQQL KAA +I+ R
Sbjct: 41 RALTRADPTLGALMKRVGPFRLQVRPLHSPFGALAESIVYQQLHGKAAATIFGRVCERVG 100
Query: 132 GEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVE-MDDVTMFKM 190
P+A+LAV LRE G+S K + L+DLA K G + + V MDD + +
Sbjct: 101 SGRKFTPEALLAVPDTSLREAGLSANKLAALQDLARKTLSGTVPPLAKVRRMDDAELIEH 160
Query: 191 LTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWK 250
T V+GIG W+V M ++F L +PDVLPV D GVRKG YGL E+P + E+W+
Sbjct: 161 FTQVRGIGQWTVEMLLMFQLERPDVLPVDDYGVRKGFMRAYGLPEMPKPKALLAYGERWR 220
Query: 251 PYRSVGSWYMWRLME 265
P+RSV SWYMWR E
Sbjct: 221 PWRSVASWYMWRSAE 235
>gi|332526280|ref|ZP_08402409.1| HhH-GPD family protein [Rubrivivax benzoatilyticus JA2]
gi|332110114|gb|EGJ10742.1| HhH-GPD family protein [Rubrivivax benzoatilyticus JA2]
Length = 218
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 78/197 (39%), Positives = 116/197 (58%), Gaps = 1/197 (0%)
Query: 70 DIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVAL 129
D A RHL +D ++ LI ES F +LA+SI+ QQ++ KAA+S++ +F AL
Sbjct: 16 DDACRHLSRRDRVMKKLIPRFGEARLESRGDAFTTLARSIVGQQISVKAAQSVWNKFSAL 75
Query: 130 FNG-EDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMF 188
+G ++ P AV + P +R G+S RK YL DLA + DG + +MDD +
Sbjct: 76 VDGPATHLAPQAVNTLDPLTMRAAGLSARKTEYLLDLARHFVDGTVHVADWQQMDDEAII 135
Query: 189 KMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEK 248
L +++GIG W+ MF+IF L +P+VLP+ DLG+ KG+ + Y E + EV E
Sbjct: 136 AELVAIRGIGRWTAEMFLIFHLMRPNVLPLDDLGLLKGISLNYFSGEPVSRAEAREVGEA 195
Query: 249 WKPYRSVGSWYMWRLME 265
W PYRSV +WY+WR ++
Sbjct: 196 WAPYRSVATWYIWRSLD 212
>gi|307153785|ref|YP_003889169.1| HhH-GPD family protein [Cyanothece sp. PCC 7822]
gi|306984013|gb|ADN15894.1| HhH-GPD family protein [Cyanothece sp. PCC 7822]
Length = 215
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 75/196 (38%), Positives = 120/196 (61%), Gaps = 3/196 (1%)
Query: 70 DIALRHLRDKDPLLATLIDA---HRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRF 126
D AL +L++ D ++A +I ++ F+S+ S +LA +I+ QQ++ + A IY RF
Sbjct: 9 DQALYYLQEADIIMAQIISEIGDYQLAEFKSNSSLLEALAWAIMAQQISTEVANKIYQRF 68
Query: 127 VALFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVT 186
++L+N + +L S + LR IG+S K YL++LA + + + M+D T
Sbjct: 69 LSLYNESTPLNARNLLQTSDEDLRSIGISRYKIGYLKNLARAVEEYLPPLSELATMEDET 128
Query: 187 MFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVC 246
+ K+LT +KGIG W+V M +IF L + D+LP GDLG+R ++ LY L ELP +E +
Sbjct: 129 IIKLLTQIKGIGTWTVQMLLIFRLQRLDILPSGDLGIRMAIKNLYQLPELPSPEIVEAIG 188
Query: 247 EKWKPYRSVGSWYMWR 262
KWKPYR++ +WY+WR
Sbjct: 189 HKWKPYRTIAAWYLWR 204
>gi|115372337|ref|ZP_01459646.1| DNA-3-methyladenine glycosylase 1 [Stigmatella aurantiaca DW4/3-1]
gi|310819603|ref|YP_003951961.1| DNA-3-methyladenine glycosylase [Stigmatella aurantiaca DW4/3-1]
gi|115370550|gb|EAU69476.1| DNA-3-methyladenine glycosylase 1 [Stigmatella aurantiaca DW4/3-1]
gi|309392675|gb|ADO70134.1| DNA-3-methyladenine glycosylase [Stigmatella aurantiaca DW4/3-1]
Length = 229
Score = 152 bits (383), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 86/209 (41%), Positives = 120/209 (57%), Gaps = 7/209 (3%)
Query: 72 ALRHLRDKDPLLATLIDAHRPPTFESS--RSPFLSLAKSILYQQLAYKAAKSIYTRFVAL 129
A R L DP LA L+ P E SPF +LA+SI+YQQL +AA +I+ R
Sbjct: 19 ARRALARADPTLAALMRKVGPFRLELKPLLSPFEALAESIVYQQLHGRAAAAIFARLCER 78
Query: 130 FNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGIL-SDESIVEMDDVTMF 188
+ P+A+LA LR GVS KA+ L+DLAEK G + S + + D +
Sbjct: 79 VGSGTGLTPEALLATPDDALRAAGVSGPKAAALKDLAEKTRAGTVPSLAQVRRLSDEALI 138
Query: 189 KMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEK 248
+ ++V+GIG W+V M +IF L +PDVLPV D +RKG L GLKE P ++ E+
Sbjct: 139 ERFSAVRGIGQWTVEMLLIFRLGRPDVLPVDDYAIRKGFMFLQGLKESPRPREVLAYGER 198
Query: 249 WKPYRSVGSWYMWRLMEAKGVLPNVAKAA 277
W+P+RSV SWY+WR +E LP + +A+
Sbjct: 199 WRPWRSVASWYLWRSLE----LPEIQEAS 223
>gi|375105426|ref|ZP_09751687.1| HhH-GPD superfamily base excision DNA repair protein
[Burkholderiales bacterium JOSHI_001]
gi|374666157|gb|EHR70942.1| HhH-GPD superfamily base excision DNA repair protein
[Burkholderiales bacterium JOSHI_001]
Length = 217
Score = 152 bits (383), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 78/197 (39%), Positives = 116/197 (58%), Gaps = 1/197 (0%)
Query: 70 DIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVAL 129
D A +HL +D ++ LI +S F +LA+SI+ QQ++ KAA+S++ RF AL
Sbjct: 15 DDACKHLAKRDRVMKKLIPQFGEARLQSRGDAFTTLARSIVGQQISVKAAQSVWDRFAAL 74
Query: 130 FNG-EDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMF 188
G I P AVL LRE G+S RKA YL DLA + G + + +MDD +
Sbjct: 75 VGGPSTRIAPKAVLGHEVPALREAGLSARKAEYLTDLARHFESGAVHVKQWQQMDDEAII 134
Query: 189 KMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEK 248
+ L +++GIG W+ MF+IF L +P+V+P+ DLG+ KG+ V Y E + EV +
Sbjct: 135 EELVAIRGIGRWTAEMFLIFHLMRPNVMPLDDLGLIKGISVNYFSGESVSRAEAREVGDA 194
Query: 249 WKPYRSVGSWYMWRLME 265
W P+RSV +WY+WR ++
Sbjct: 195 WTPFRSVATWYIWRSLD 211
>gi|67923577|ref|ZP_00517050.1| DNA-3-methyladenine glycosylase II [Crocosphaera watsonii WH 8501]
gi|67854603|gb|EAM49889.1| DNA-3-methyladenine glycosylase II [Crocosphaera watsonii WH 8501]
Length = 206
Score = 150 bits (380), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 73/194 (37%), Positives = 121/194 (62%), Gaps = 3/194 (1%)
Query: 72 ALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFN 131
A +LR D +LA +I + T + FL+L K+I+ QQ++ AA +I R +L
Sbjct: 10 AKEYLRSNDAILADIIALYPSETMINYHDAFLTLVKAIIGQQISVSAANAINQRVESLL- 68
Query: 132 GEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKML 191
GE I P+ L PQ LR+ G+S +K +Y+ ++ + + DGIL+ ++ EM D + L
Sbjct: 69 GE--ITPENYLETDPQLLRKCGLSRQKIAYITNITQGFKDGILTPQAWSEMTDKAVIAQL 126
Query: 192 TSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKP 251
TS+KGIG W+ MF+IF LH+ D+ P+ DLG+ +Q+ YG ++ +++E+ ++WKP
Sbjct: 127 TSIKGIGPWTAQMFLIFHLHRRDIFPLADLGLINAIQLHYGSEKALSKGEIKELSQRWKP 186
Query: 252 YRSVGSWYMWRLME 265
YR+V +WY+WR ++
Sbjct: 187 YRTVATWYLWRSLD 200
>gi|397689741|ref|YP_006526995.1| DNA-3-methyladenine glycosylase [Melioribacter roseus P3M]
gi|395811233|gb|AFN73982.1| DNA-3-methyladenine glycosylase [Melioribacter roseus P3M]
Length = 210
Score = 150 bits (380), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 74/200 (37%), Positives = 126/200 (63%), Gaps = 4/200 (2%)
Query: 68 EVDIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFV 127
E++ AL HL D +L+TLI + + + F++L ++I+ QQL+ KAA SI +F+
Sbjct: 5 EIERALAHLSRNDKVLSTLIKNNGICNLPTHKKYFIALLRAIIGQQLSLKAADSINRKFL 64
Query: 128 ALFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTM 187
A F+ + PD++L+ + LR +G+S K Y++DLA K +G + ++ + D +
Sbjct: 65 AYFDNSPD--PDSILSAKDETLRSLGLSKAKVKYVKDLALKVKEGEVKLKNFSKKRDEEI 122
Query: 188 FKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCE 247
+ LT VKG+G W+ MF+IF+L +PDVLPV DLG+RK + + YGLK LP +++ + +
Sbjct: 123 IEELTKVKGVGVWTAQMFLIFTLGRPDVLPVDDLGIRKAIMLNYGLKNLPSGEEIKRLAK 182
Query: 248 K--WKPYRSVGSWYMWRLME 265
K W P+ ++ S Y+W+ ++
Sbjct: 183 KNGWSPFSTIASLYLWKSLD 202
>gi|296134922|ref|YP_003642164.1| HhH-GPD family protein [Thiomonas intermedia K12]
gi|295795044|gb|ADG29834.1| HhH-GPD family protein [Thiomonas intermedia K12]
Length = 221
Score = 150 bits (378), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 76/196 (38%), Positives = 116/196 (59%), Gaps = 3/196 (1%)
Query: 70 DIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVAL 129
D A HL+ D ++ LI H +S PF +LA+SI+ QQ++ KAA++++ R A
Sbjct: 23 DKACAHLQRTDRVMRKLIKTHAGTRLQSRGDPFQTLARSIIGQQISVKAAQTVWDRLCAA 82
Query: 130 FNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFK 189
+ P+ ++ + Q LR G+S RKA Y+RDLA K+ G + + EM D +
Sbjct: 83 VP---QVAPEHLVGLDDQALRACGLSGRKAGYVRDLAVKFHAGEVHPDQWQEMPDEAIAA 139
Query: 190 MLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKW 249
L +++GIG W+ MF+IF L +PDVLP+GDLG+ KG+ Y E ++ EV W
Sbjct: 140 ELLTIRGIGRWTADMFLIFHLMRPDVLPLGDLGLIKGVSQTYFAGEPVTQSEVREVAAAW 199
Query: 250 KPYRSVGSWYMWRLME 265
P+RSVG+WY+WR ++
Sbjct: 200 APWRSVGTWYIWRSLD 215
>gi|220906068|ref|YP_002481379.1| DNA-3-methyladenine glycosylase II [Cyanothece sp. PCC 7425]
gi|219862679|gb|ACL43018.1| DNA-3-methyladenine glycosylase II [Cyanothece sp. PCC 7425]
Length = 186
Score = 150 bits (378), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 65/164 (39%), Positives = 112/164 (68%)
Query: 102 FLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNILPDAVLAVSPQQLREIGVSYRKASY 161
F LA++ILYQQL+ KAA +I+ RF+ L+ + +L + ++LR +G+S K Y
Sbjct: 20 FNCLAEAILYQQLSGKAAATIHGRFLQLYAPAAAPTAEDILNTAEEELRRVGISRSKVLY 79
Query: 162 LRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDL 221
L+DLA+ +G+ + E + +M+D T+ ++LT +KG+G W+V M +IF LH+ +VLP+ DL
Sbjct: 80 LKDLAQHCLNGLPTIEELEDMEDETIIQVLTPIKGVGRWTVQMLLIFRLHRWNVLPIDDL 139
Query: 222 GVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSWYMWRLME 265
G+R L+ +YGL +LP ++ + + W+PYR++ +WY+WR ++
Sbjct: 140 GIRTALRQVYGLADLPDRKNVDRLGQPWQPYRTIATWYLWRSLD 183
>gi|416375171|ref|ZP_11683305.1| DNA-3-methyladenine glycosylase II [Crocosphaera watsonii WH 0003]
gi|357266559|gb|EHJ15168.1| DNA-3-methyladenine glycosylase II [Crocosphaera watsonii WH 0003]
Length = 211
Score = 150 bits (378), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 72/194 (37%), Positives = 121/194 (62%), Gaps = 3/194 (1%)
Query: 72 ALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFN 131
A +LR D +LA +I + T + FL+L K+I+ QQ++ AA +I R +L
Sbjct: 15 AKEYLRSNDAILADIIALYPSETMINYHDAFLTLVKAIIGQQISVSAANAINQRVESLL- 73
Query: 132 GEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKML 191
GE I P+ L PQ LR+ G+S +K +Y+ ++ + + DGIL+ ++ +M D + L
Sbjct: 74 GE--ITPENYLETDPQLLRQCGLSRQKIAYITNITQGFKDGILTPQTWSDMTDKAVIDQL 131
Query: 192 TSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKP 251
TS+KGIG W+ MF+IF LH+ D+ P+ DLG+ +Q+ YG ++ +++E+ ++WKP
Sbjct: 132 TSIKGIGPWTAQMFLIFHLHRRDIFPLADLGLINAIQLHYGSEKALSKGEIKELSQRWKP 191
Query: 252 YRSVGSWYMWRLME 265
YR+V +WY+WR ++
Sbjct: 192 YRTVATWYLWRSLD 205
>gi|405372134|ref|ZP_11027398.1| DNA-3-methyladenine glycosylase II [Chondromyces apiculatus DSM
436]
gi|397088507|gb|EJJ19488.1| DNA-3-methyladenine glycosylase II [Myxococcus sp. (contaminant ex
DSM 436)]
Length = 224
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 83/197 (42%), Positives = 111/197 (56%), Gaps = 7/197 (3%)
Query: 74 RHLRDKDPLLATLIDAHRPPTFESS----RSPFLSLAKSILYQQLAYKAAKSIYTRFVAL 129
R L DP + L+ R F+ SPF +LA+SI+YQQL KAA +I+ R
Sbjct: 25 RSLARADPTMGALMK--RVGAFKLQVRPLHSPFGALAESIVYQQLHGKAAATIFGRVCER 82
Query: 130 FNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVE-MDDVTMF 188
P+A+LAV LRE G+S K + L DLA K +G + + V MDD +
Sbjct: 83 VGSGKKFTPEALLAVPETSLREAGLSANKLAALLDLARKTHEGTVPTLAKVRRMDDAELI 142
Query: 189 KMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEK 248
+ T V+GIG W+V M ++F L +PDVLPV D GVRKG YGL E+P + E+
Sbjct: 143 EHFTQVRGIGQWTVEMLLMFQLERPDVLPVDDFGVRKGFMKAYGLPEMPKPKALLAYGER 202
Query: 249 WKPYRSVGSWYMWRLME 265
W+P+RSV SWY+WR E
Sbjct: 203 WRPWRSVASWYLWRASE 219
>gi|224824974|ref|ZP_03698080.1| HhH-GPD family protein [Pseudogulbenkiania ferrooxidans 2002]
gi|224602645|gb|EEG08822.1| HhH-GPD family protein [Pseudogulbenkiania ferrooxidans 2002]
Length = 205
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 76/200 (38%), Positives = 122/200 (61%), Gaps = 7/200 (3%)
Query: 68 EVDIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFV 127
E A L + DP++A LI + PF +L ++I+ QQ++ KAA +I++R
Sbjct: 5 EWQAACEGLAEADPVMAGLIACFPGSRLVTRGQPFETLLRAIVGQQISLKAADAIWSRLS 64
Query: 128 ALFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTM 187
A+ + PD++LA S LR+ G+S RKA Y++DLA + DG + +S + D +
Sbjct: 65 AMVRCDS---PDSILAASVDALRQAGLSARKADYVQDLARHFADGRIDPQSFPALGDEDI 121
Query: 188 FKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLY--GLKELPGALKMEEV 245
+ L +V+GIG W+ MF+IF L +PDV + D+G+++ + LY GL+ P AL+ E+
Sbjct: 122 IRELVAVRGIGRWTAEMFLIFHLARPDVWAIDDIGLQRAVSGLYLDGLRPTPAALR--EL 179
Query: 246 CEKWKPYRSVGSWYMWRLME 265
E+W+P+RSV SWY+WR +E
Sbjct: 180 GERWRPWRSVASWYLWRHVE 199
>gi|292656929|ref|YP_003536826.1| DNA-3-methyladenine glycosylase [Haloferax volcanii DS2]
gi|448290928|ref|ZP_21482073.1| DNA-3-methyladenine glycosylase [Haloferax volcanii DS2]
gi|291372617|gb|ADE04844.1| DNA-3-methyladenine glycosylase [Haloferax volcanii DS2]
gi|445577981|gb|ELY32401.1| DNA-3-methyladenine glycosylase [Haloferax volcanii DS2]
Length = 193
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 79/197 (40%), Positives = 122/197 (61%), Gaps = 7/197 (3%)
Query: 70 DIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVAL 129
D A R LR DP L ++D H P + + + PF L SI+ QQL+ AA +I R L
Sbjct: 3 DDAYRELR-ADPNLGDVVDEHGPLSLDPADDPFERLVVSIVNQQLSTTAAATIRDR---L 58
Query: 130 FNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFK 189
F+ + + P+ +LAV LR+ G+S +K Y+R++A+ + DG LS ES+ EMDD +
Sbjct: 59 FDRVE-VTPEGILAVDEDVLRDCGLSNQKVGYVRNVADAFRDG-LSAESLREMDDGEVVS 116
Query: 190 MLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGAL-KMEEVCEK 248
LT ++G+G W+ MF+IF L + DV PV DLG+R+G++ ++G ++ + +M E E+
Sbjct: 117 ALTEIRGVGDWTAKMFLIFVLAREDVFPVEDLGIRRGMEHVFGFEQDAVSRGEMRERAER 176
Query: 249 WKPYRSVGSWYMWRLME 265
W PYRS S Y+WR ++
Sbjct: 177 WAPYRSYASRYLWRCVD 193
>gi|410692435|ref|YP_003623056.1| putative DNA-3-methyladenine glycosylase II [Thiomonas sp. 3As]
gi|294338859|emb|CAZ87193.1| putative DNA-3-methyladenine glycosylase II [Thiomonas sp. 3As]
Length = 222
Score = 148 bits (374), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 75/196 (38%), Positives = 116/196 (59%), Gaps = 3/196 (1%)
Query: 70 DIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVAL 129
D A HL+ D ++ LI H +S PF +LA+SI+ QQ++ KAA++++ R A
Sbjct: 24 DKACAHLQRTDRVMRKLIKTHAGTRLQSRGDPFQTLARSIIGQQISVKAAQTVWDRLCAA 83
Query: 130 FNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFK 189
+ P+ ++ + + LR G+S RKA Y+RDLA K+ G + + EM D +
Sbjct: 84 VP---QVAPEHLVGLDDEALRACGLSGRKAGYVRDLAVKFHAGEVHPDQWQEMPDEAIAA 140
Query: 190 MLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKW 249
L +++GIG W+ MF+IF L +PDVLP+GDLG+ KG+ Y E ++ EV W
Sbjct: 141 ELLTIRGIGRWTADMFLIFHLMRPDVLPLGDLGLIKGVSQTYFAGEPVTQSEVREVAAAW 200
Query: 250 KPYRSVGSWYMWRLME 265
P+RSVG+WY+WR ++
Sbjct: 201 APWRSVGTWYIWRSLD 216
>gi|347540411|ref|YP_004847836.1| HhH-GPD family protein [Pseudogulbenkiania sp. NH8B]
gi|345643589|dbj|BAK77422.1| HhH-GPD family protein [Pseudogulbenkiania sp. NH8B]
Length = 205
Score = 148 bits (373), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 76/200 (38%), Positives = 122/200 (61%), Gaps = 7/200 (3%)
Query: 68 EVDIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFV 127
E A L + DP++A LI + PF +L ++I+ QQ++ KAA +I++R
Sbjct: 5 EWQAACEGLAEADPVMAGLIARFPGSRLVTRGQPFETLLRAIVGQQISLKAADAIWSRLS 64
Query: 128 ALFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTM 187
A+ + PD++LA S LR+ G+S RKA Y++DLA + DG + +S + D +
Sbjct: 65 AMVRCDS---PDSILAASVDGLRQAGLSARKADYVQDLARHFADGRIDPQSFPALGDEDI 121
Query: 188 FKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLY--GLKELPGALKMEEV 245
+ L +V+GIG W+ MF+IF L +PDV + D+G+++ + LY GL+ P AL+ E+
Sbjct: 122 IRELVAVRGIGRWTAEMFLIFHLARPDVWAIDDIGLQRAVSGLYLDGLRPTPAALR--EL 179
Query: 246 CEKWKPYRSVGSWYMWRLME 265
E+W+P+RSV SWY+WR +E
Sbjct: 180 GERWRPWRSVASWYLWRHVE 199
>gi|225873487|ref|YP_002754946.1| DNA-3-methyladenine glycosylase [Acidobacterium capsulatum ATCC
51196]
gi|225794495|gb|ACO34585.1| putative DNA-3-methyladenine glycosylase [Acidobacterium capsulatum
ATCC 51196]
Length = 229
Score = 148 bits (373), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 88/213 (41%), Positives = 117/213 (54%), Gaps = 13/213 (6%)
Query: 68 EVDIALRHLRDKDPLLATLIDAHRPPTF--ESSRSPFLSLAKSILYQQLAYKAAKSIYTR 125
+ D+A R L + DP L LI+ P T +S SPF SL +SI+YQQL KAA +I R
Sbjct: 11 DADLACRELAEADPKLGKLIECAGPFTLRLQSQHSPFESLLESIIYQQLHGKAAAAILKR 70
Query: 126 FVALFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGIL-SDESIVEMDD 184
+ F GE + P+ +LA QLR GVS K LRDLA K DG + S + I M D
Sbjct: 71 LLESF-GEYHPAPEHLLAAPDDQLRAAGVSQSKVLALRDLAAKTMDGTVPSLQRIRRMPD 129
Query: 185 VTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVL---------YGLKE 235
+ L++V+GIG W+ M +IF L +PDV PV D G+RKG + +
Sbjct: 130 DEIVARLSAVRGIGKWTAEMMLIFRLGRPDVFPVTDYGIRKGFALTFDRLPKSKPFDASM 189
Query: 236 LPGALKMEEVCEKWKPYRSVGSWYMWRLMEAKG 268
L KM EKW+P+RSV +WY+WR + G
Sbjct: 190 LADMKKMARRAEKWRPWRSVATWYLWRACDLAG 222
>gi|114328005|ref|YP_745162.1| DNA-3-methyladenine glycosylase II [Granulibacter bethesdensis
CGDNIH1]
gi|114316179|gb|ABI62239.1| DNA-3-methyladenine glycosylase II [Granulibacter bethesdensis
CGDNIH1]
Length = 255
Score = 147 bits (372), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 78/214 (36%), Positives = 124/214 (57%), Gaps = 4/214 (1%)
Query: 63 LTFKGEVDIALRHLRDKDPLLATLIDAHRPP--TFESSRSPFLSLAKSILYQQLAYKAAK 120
L+ + + A HL +D L+ LI PP T +SPF +L ++I +QQL +AA+
Sbjct: 24 LSCPAQTEEACAHLARQDKALSALITRVGPPRLTISLEQSPFEALIRAIAHQQLHARAAE 83
Query: 121 SIYTRFVALFN-GEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDES- 178
+I RF+ALF D P ++A+ + LR+ G S K LR + E GI+ D S
Sbjct: 84 AILARFLALFPVNTDFPSPLEIMALDTETLRQCGFSGTKIIALRGVCEAAQGGIIPDRSG 143
Query: 179 IVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPG 238
+DD T+ + LT+++GIG W+V M MIF+L + D+LPV D GVR+G +++ GL+ P
Sbjct: 144 CTALDDETLIQRLTTLRGIGRWTVEMLMIFTLGRTDILPVDDFGVREGWRLIKGLESQPR 203
Query: 239 ALKMEEVCEKWKPYRSVGSWYMWRLMEAKGVLPN 272
+ ++ + W P+RS+ +WY+WR + +P
Sbjct: 204 PKILADIGQSWSPWRSLAAWYLWRAADEAKKIPR 237
>gi|172037923|ref|YP_001804424.1| putative DNA-3-methyladenine glycosylase II [Cyanothece sp. ATCC
51142]
gi|354556630|ref|ZP_08975922.1| HhH-GPD family protein [Cyanothece sp. ATCC 51472]
gi|171699377|gb|ACB52358.1| putative DNA-3-methyladenine glycosylase II [Cyanothece sp. ATCC
51142]
gi|353551404|gb|EHC20808.1| HhH-GPD family protein [Cyanothece sp. ATCC 51472]
Length = 206
Score = 147 bits (372), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 80/211 (37%), Positives = 127/211 (60%), Gaps = 12/211 (5%)
Query: 55 NSPKIFKPLTFKGEVDIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQL 114
NSPK + A +L KDP+LA LI ++ T + +PFL+L K+I+ QQ+
Sbjct: 2 NSPKYWHE---------AKEYLTLKDPILAELIASYPSETMLNYYNPFLTLMKAIIGQQI 52
Query: 115 AYKAAKSIYTRFVALFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGIL 174
+ AA SI +R V G +I + L + LR+ G+S +K Y+R++A+ + +GIL
Sbjct: 53 SVAAAHSI-SRKVENLLGSISI--NNYLEIDELSLRQCGLSRQKILYIRNVAQAFEEGIL 109
Query: 175 SDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLK 234
+ +S M D + K LTS+KGIG+W+ MF+IF LH+ D+ P+ DLG+ +Q YG
Sbjct: 110 TPQSWETMSDQEITKQLTSIKGIGSWTAQMFLIFHLHRKDIFPMADLGLINAIQRHYGNT 169
Query: 235 ELPGALKMEEVCEKWKPYRSVGSWYMWRLME 265
L +++E+ + WKPYR+V +WY+WR ++
Sbjct: 170 NLLTKEQIKELSQPWKPYRTVATWYLWRSLD 200
>gi|149177903|ref|ZP_01856501.1| probable DNA-3-methyladenine glycosylase [Planctomyces maris DSM
8797]
gi|148843243|gb|EDL57608.1| probable DNA-3-methyladenine glycosylase [Planctomyces maris DSM
8797]
Length = 211
Score = 147 bits (372), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 74/194 (38%), Positives = 115/194 (59%), Gaps = 1/194 (0%)
Query: 72 ALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFN 131
A +HL DPLL +I++ P + R F L +SI+ QQ++ AA++IY R AL
Sbjct: 11 ASKHLSKADPLLKPVINSIGPCPLKPYRYRFALLLRSIVSQQISTSAARTIYLRLHAL-T 69
Query: 132 GEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKML 191
G+ + V+ +S +QLR +G+S +KA+Y+R LAE + + + D + L
Sbjct: 70 GKGQPTAEKVMQLSHEQLRSVGLSNQKATYVRHLAEMVMQNKVRLHKMHLLSDEDVTSEL 129
Query: 192 TSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKP 251
VKGIG W+ MF++F L +PD+ P DLG++ G+Q +Y LK P E+ ++W+P
Sbjct: 130 IQVKGIGVWTAQMFLMFGLCRPDIFPHDDLGIQNGIQKIYELKTRPDKQTCIEIAQRWQP 189
Query: 252 YRSVGSWYMWRLME 265
YR+V SWY WR++E
Sbjct: 190 YRTVASWYCWRILE 203
>gi|223936549|ref|ZP_03628460.1| DNA-3-methyladenine glycosylase II [bacterium Ellin514]
gi|223894713|gb|EEF61163.1| DNA-3-methyladenine glycosylase II [bacterium Ellin514]
Length = 197
Score = 147 bits (372), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 76/194 (39%), Positives = 117/194 (60%), Gaps = 3/194 (1%)
Query: 80 DPLLATLIDAHRPPTFESS--RSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNIL 137
D LA LI+ P ++ + R+PF +L +S+ YQQL AA +I+ RF AL+
Sbjct: 4 DKTLAALINRVGPCAWKPTKRRTPFEALVQSVAYQQLNGLAAATIFGRFKALYPKTRFPT 63
Query: 138 PDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGIL-SDESIVEMDDVTMFKMLTSVKG 196
P A+L ++LR G+S K + ++D+A K +GI+ + SI +D+ T+ LT+++G
Sbjct: 64 PQAILETPDERLRTAGLSRAKVAAIKDIAAKTVEGIVPNSRSIARLDNSTIISQLTTIRG 123
Query: 197 IGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVG 256
IG W+V M +IF L + DVLP D VRKG V YG +LP ++ + E W+PYR+V
Sbjct: 124 IGTWTVEMLLIFKLGRLDVLPTTDYAVRKGFAVTYGWNDLPKPAELLKHGEIWRPYRTVA 183
Query: 257 SWYMWRLMEAKGVL 270
SWY+WR ++ + L
Sbjct: 184 SWYLWRSLDIQVTL 197
>gi|37521587|ref|NP_924964.1| DNA-3-methyladenine glycosylase [Gloeobacter violaceus PCC 7421]
gi|35212585|dbj|BAC89959.1| gll2018 [Gloeobacter violaceus PCC 7421]
Length = 206
Score = 147 bits (371), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 77/196 (39%), Positives = 124/196 (63%), Gaps = 3/196 (1%)
Query: 72 ALRHLRDKDPLLATLIDAHRPPTFESSRSP--FLSLAKSILYQQLAYKAAKSIYTRFVAL 129
A+ HL+ DP+LA +I+ ++++S + F ++ ++I+YQQL+ KAA +I+ R L
Sbjct: 12 AVGHLKRSDPILAAIIERVGDCSYQTSAAGTHFDAVVRAIVYQQLSGKAAATIHKRLCDL 71
Query: 130 FNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFK 189
F+G LP +LAV LR +G+S +K +YL+ LA + G L+ E++ ++D +
Sbjct: 72 FDGRPP-LPAELLAVEAAALRGVGLSRQKLNYLKSLAAQVESGALAIETLHILEDQAILA 130
Query: 190 MLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKW 249
L +KGIG W+ MF++F L +P+VLP GDLG++K +Q+ Y LK LP +M V E W
Sbjct: 131 ELMRLKGIGRWTAQMFLMFRLGRPNVLPEGDLGIQKAIQLAYSLKALPSPKQMAAVSEPW 190
Query: 250 KPYRSVGSWYMWRLME 265
PY ++ WY+WR +E
Sbjct: 191 HPYCTIACWYLWRSLE 206
>gi|104780072|ref|YP_606570.1| DNA-3-methyladenine glycosylase [Pseudomonas entomophila L48]
gi|95109059|emb|CAK13755.1| putative DNA-3-methyladenine glycosylase [Pseudomonas entomophila
L48]
Length = 208
Score = 147 bits (371), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 77/213 (36%), Positives = 125/213 (58%), Gaps = 12/213 (5%)
Query: 53 SDNSPKIFKPLTFKGEVDIALRHLRDKDPLLATLIDAHRPPTFESS--RSPFLSLAKSIL 110
+D SP+ F D A +L +DP A I A P +++ R P+ +L ++I
Sbjct: 4 ADLSPQAF---------DAATEYLAGQDPDWARHIAATGPCLHQATPGREPYETLVRAIA 54
Query: 111 YQQLAYKAAKSIYTRFVALFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYT 170
YQQL +AA++I R +ALF P+ +LAVSP+ +R G S K + L +A+ Y
Sbjct: 55 YQQLHARAAEAILGRLLALFPETAFPTPEQLLAVSPEMMRACGFSASKTATLHGIAQAYL 114
Query: 171 DGIL-SDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQV 229
+G++ S + + D + + L S++G+G W+V M +I+SL + D+LPV D GVR+G +
Sbjct: 115 EGVVPSRAEALLLPDDALVERLVSLRGVGRWTVEMLLIYSLERSDILPVDDFGVREGYRR 174
Query: 230 LYGLKELPGALKMEEVCEKWKPYRSVGSWYMWR 262
+ GL++ P +M E+ + W PYR+V +WY+WR
Sbjct: 175 MKGLEKAPTPARMREMGQAWSPYRTVAAWYLWR 207
>gi|448568190|ref|ZP_21637767.1| DNA-3-methyladenine glycosylase [Haloferax lucentense DSM 14919]
gi|445727140|gb|ELZ78754.1| DNA-3-methyladenine glycosylase [Haloferax lucentense DSM 14919]
Length = 193
Score = 147 bits (371), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 78/197 (39%), Positives = 119/197 (60%), Gaps = 7/197 (3%)
Query: 70 DIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVAL 129
D A R LR DP L ++D H P + + + PF L SI+ QQL+ AA +I R L
Sbjct: 3 DDAYRELR-ADPHLGDVVDEHGPLSLDPADDPFERLVVSIVNQQLSTTAAATIRDR---L 58
Query: 130 FNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFK 189
F+ + P+ +LA LR+ G+S +K Y+R++A+ + DG LS ES+ EMDD +
Sbjct: 59 FD-RVEVTPEGILAADEDVLRDCGLSNQKVGYVRNVADAFRDG-LSAESLREMDDGEVVA 116
Query: 190 MLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGL-KELPGALKMEEVCEK 248
LT ++G+G W+ MF+IF L + DV PV DLG+R+G++ ++G ++ +M E E+
Sbjct: 117 ALTEIRGVGDWTAKMFLIFVLAREDVFPVEDLGIRRGMEHVFGFEQDAVSRGEMRERAER 176
Query: 249 WKPYRSVGSWYMWRLME 265
W PYRS S Y+WR ++
Sbjct: 177 WAPYRSYASRYLWRCVD 193
>gi|124267641|ref|YP_001021645.1| DNA-3-methyladenine glycosylase [Methylibium petroleiphilum PM1]
gi|124260416|gb|ABM95410.1| DNA-3-methyladenine glycosylase [Methylibium petroleiphilum PM1]
Length = 217
Score = 147 bits (370), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 76/200 (38%), Positives = 115/200 (57%), Gaps = 2/200 (1%)
Query: 70 DIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVAL 129
D A +HL +D ++ LI ES F +LA+SI+ QQ++ AA++++ RF AL
Sbjct: 15 DEACKHLAKRDRVMRKLIPKLGEARLESRGDAFTTLARSIVGQQISVPAAQAVWERFAAL 74
Query: 130 FNGED--NILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTM 187
F G ++ P VLA LR G+S RK YLRDLA + G + + MDD ++
Sbjct: 75 FEGGSAVHVRPAGVLAADSAALRGAGLSARKIEYLRDLAGHFDGGTVHVRNWTSMDDESI 134
Query: 188 FKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCE 247
L +++GIG W+ MF+IF L +P+VLP+ DLG+ KG+ Y E + EV +
Sbjct: 135 IDELVAIRGIGRWTAEMFLIFHLMRPNVLPLDDLGLLKGISQHYFSGEPVSRNEAREVGD 194
Query: 248 KWKPYRSVGSWYMWRLMEAK 267
W P+RSV +WY+WR ++ +
Sbjct: 195 AWAPFRSVATWYLWRSLDPR 214
>gi|320109207|ref|YP_004184797.1| DNA-3-methyladenine glycosylase II [Terriglobus saanensis SP1PR4]
gi|319927728|gb|ADV84803.1| DNA-3-methyladenine glycosylase II [Terriglobus saanensis SP1PR4]
Length = 238
Score = 147 bits (370), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 88/211 (41%), Positives = 125/211 (59%), Gaps = 16/211 (7%)
Query: 68 EVDIALRHLRDKDPLLATLIDAHRPPTFESS--RSPFLSLAKSILYQQLAYKAAKSIYTR 125
+ + AL HL +D L LI T ++ +SPF +L ++I++QQL KAA +I+ R
Sbjct: 15 DTEAALAHLTARDAKLGRLIARAGAFTMRTAGQQSPFEALTEAIVFQQLHGKAAATIHRR 74
Query: 126 FVALFNGEDNI----LPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGIL-SDESIV 180
+ F+ I P+ +L +QLR G+S+ KA LRDLA K DG + + I
Sbjct: 75 LLESFHPVCGIGLHPSPEHLLDCPNEQLRGAGLSHNKALALRDLAAKTLDGTVPTLAKIR 134
Query: 181 EMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLY-GLK----- 234
MDD + + LT V+GIG W+V M +IF L +PDVLPV D GVRKG + + GLK
Sbjct: 135 RMDDEAIIEHLTQVRGIGRWTVEMMLIFRLGRPDVLPVDDYGVRKGFALTFLGLKSTGKV 194
Query: 235 ---ELPGALKMEEVCEKWKPYRSVGSWYMWR 262
+LP A+ +E+ EKW+P+RSV SWYM+R
Sbjct: 195 VPRDLPKAVVIEKRAEKWRPFRSVASWYMYR 225
>gi|448546388|ref|ZP_21626552.1| DNA-3-methyladenine glycosylase [Haloferax sp. ATCC BAA-646]
gi|448548375|ref|ZP_21627642.1| DNA-3-methyladenine glycosylase [Haloferax sp. ATCC BAA-645]
gi|448557569|ref|ZP_21632758.1| DNA-3-methyladenine glycosylase [Haloferax sp. ATCC BAA-644]
gi|445702841|gb|ELZ54781.1| DNA-3-methyladenine glycosylase [Haloferax sp. ATCC BAA-646]
gi|445714126|gb|ELZ65893.1| DNA-3-methyladenine glycosylase [Haloferax sp. ATCC BAA-644]
gi|445714470|gb|ELZ66232.1| DNA-3-methyladenine glycosylase [Haloferax sp. ATCC BAA-645]
Length = 193
Score = 147 bits (370), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 79/198 (39%), Positives = 120/198 (60%), Gaps = 9/198 (4%)
Query: 70 DIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVAL 129
D A R LR DP L ++D H P + + + PF L SI+ QQL+ AA +I R L
Sbjct: 3 DDAYRELR-ADPHLGDVVDEHGPLSLDPADDPFERLVVSIVNQQLSTTAAATIRDR---L 58
Query: 130 FNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFK 189
F+ + P+ +LA LR+ G+S +K Y+R++A+ + DG LS ES+ EMDD +
Sbjct: 59 FD-RVEVTPEGILAADESVLRDCGLSNQKVGYVRNVADAFRDG-LSAESLREMDDGEVVA 116
Query: 190 MLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKE--LPGALKMEEVCE 247
LT ++G+G W+ MF+IF L + DV PV DLG+R+G++ ++G + +P +M E E
Sbjct: 117 ALTEIRGVGDWTAKMFLIFVLAREDVFPVEDLGIRRGMEHVFGFERDAVPRG-EMRERAE 175
Query: 248 KWKPYRSVGSWYMWRLME 265
+W PYRS S Y+WR ++
Sbjct: 176 RWAPYRSYASRYLWRCVD 193
>gi|312796648|ref|YP_004029570.1| DNA-3-methyladenine glycosylase II [Burkholderia rhizoxinica HKI
454]
gi|312168423|emb|CBW75426.1| DNA-3-methyladenine glycosylase II (EC 3.2.2.21) [Burkholderia
rhizoxinica HKI 454]
Length = 345
Score = 146 bits (369), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 87/255 (34%), Positives = 138/255 (54%), Gaps = 9/255 (3%)
Query: 13 QNPSASSKITFPPRKIR-KLTTITPITK-IAEIPVATAISTNSDNSPKIFKPLTFKGEVD 70
N AS+ T P R R ++ ++P K +A A+ +T+ + P +P + D
Sbjct: 92 HNARASASGTEPVRNARLPVSDVSPARKAVAPASEASVPATSQEQVPTASRPEYW----D 147
Query: 71 IALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALF 130
A L +D +L LI P PF++LA+SI+ QQ++ AA++I+ R A
Sbjct: 148 RACADLVRRDRILKKLIPQFGPVHLMVRGDPFMTLARSIVGQQISVSAAQAIWARLAAAC 207
Query: 131 NGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKM 190
+I P ++ + +L E G+S RK+ Y+ DLA+ +T G L S MDD +
Sbjct: 208 ---PSIAPARIVKLGQPRLIECGLSKRKSEYILDLAQHFTSGALHVASWASMDDEAVIDE 264
Query: 191 LTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWK 250
LT ++GIG W+ MF+IF+L +P+VLP+ DLG+ + + V Y E + EV W+
Sbjct: 265 LTQIRGIGRWTAEMFLIFNLMRPNVLPLDDLGLIRAISVNYFSGEPVTRSEAREVAANWE 324
Query: 251 PYRSVGSWYMWRLME 265
P+R+V +WYMWR +E
Sbjct: 325 PWRTVATWYMWRSLE 339
>gi|448565277|ref|ZP_21636144.1| DNA-3-methyladenine glycosylase [Haloferax prahovense DSM 18310]
gi|445715021|gb|ELZ66777.1| DNA-3-methyladenine glycosylase [Haloferax prahovense DSM 18310]
Length = 193
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 79/199 (39%), Positives = 121/199 (60%), Gaps = 11/199 (5%)
Query: 70 DIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVAL 129
D A R LR DP L +++ H P + + + PF L SI+ QQL+ AA +I R L
Sbjct: 3 DDAYRELR-ADPHLGDVVEEHGPLSLDPADDPFERLVVSIVNQQLSTTAAATIRDR---L 58
Query: 130 FNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFK 189
F+ + P+ +LA LR+ G+S +K Y+R++A+ + DG LS ES+ EMDD +
Sbjct: 59 FD-RVEVTPEGILAADEAVLRDCGLSNQKVGYVRNVADAFRDG-LSAESLREMDDDEVVA 116
Query: 190 MLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGAL---KMEEVC 246
LT ++G+G W+ MF+IF L + DV PV DLG+R+G++ ++G + P A+ +M E
Sbjct: 117 ALTEIRGVGDWTAKMFLIFVLAREDVFPVEDLGIRRGMERVFGFE--PDAVSRGEMRERA 174
Query: 247 EKWKPYRSVGSWYMWRLME 265
E+W PYRS S Y+WR ++
Sbjct: 175 ERWAPYRSYASRYLWRCVD 193
>gi|407803937|ref|ZP_11150768.1| DNA-3-methyladenine glycosylase II [Alcanivorax sp. W11-5]
gi|407022187|gb|EKE33943.1| DNA-3-methyladenine glycosylase II [Alcanivorax sp. W11-5]
Length = 213
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 74/201 (36%), Positives = 120/201 (59%), Gaps = 4/201 (1%)
Query: 69 VDIALRHLRDKDPLLATLIDAHRPP--TFESSRSPFLSLAKSILYQQLAYKAAKSIYTRF 126
D ALRHL DP +I P T ++ RSP+ +LA++++YQQL +AA +I R
Sbjct: 8 TDPALRHLCRADPDWLPVIRRVGPCGLTPDNGRSPYEALARAVIYQQLHGRAAAAITARL 67
Query: 127 VALFNGEDNI-LPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDES-IVEMDD 184
+AL+ + P A+LA LR G+S K + L+ +AE G++ S +DD
Sbjct: 68 LALYGKRERFPQPAALLATPVDTLRACGLSANKVATLQGIAEGKLGGVIPTRSQAARLDD 127
Query: 185 VTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEE 244
+ + LT+++G+G W+V M ++ +L++PDV+P GD GVR+G ++L GL P +
Sbjct: 128 EALIERLTTLRGVGRWTVEMLLMHTLNRPDVMPAGDFGVREGWRLLKGLPAQPAPKALLA 187
Query: 245 VCEKWKPYRSVGSWYMWRLME 265
+ E W+PYRS +WY+WR+++
Sbjct: 188 ISEAWRPYRSTAAWYLWRVVD 208
>gi|451822879|ref|YP_007459153.1| DNA-3-methyladenine glycosylase II [Candidatus
Kinetoplastibacterium desouzaii TCC079E]
gi|451775679|gb|AGF46720.1| DNA-3-methyladenine glycosylase II [Candidatus
Kinetoplastibacterium desouzaii TCC079E]
Length = 207
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 72/207 (34%), Positives = 123/207 (59%), Gaps = 2/207 (0%)
Query: 59 IFKPLTFKGEVDIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKA 118
I K + + + A+ L+ KD +L +I ++ S+ SPFL+L + +L QQ++ K+
Sbjct: 3 IIKNIVYPDYWEKAILELKKKDRILKKIIPLYKGKYKPSANSPFLTLIRFVLGQQVSVKS 62
Query: 119 AKSIYTRFVALFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDES 178
A +I+ R + L DN P +L + + LR IG+S RK YL+D+A+ + + E
Sbjct: 63 ADTIWGRLIRLLG--DNPSPKLILDIDSESLRVIGISKRKIEYLKDIADHFVAKHIQPEK 120
Query: 179 IVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPG 238
+MDD ++ L+S++G+G W+ MF+IF+L +PDV+P+ DLG+ K + + Y E
Sbjct: 121 WADMDDESIISDLSSIRGVGRWTAEMFLIFNLQRPDVMPLDDLGLLKAISIHYFSGEPVS 180
Query: 239 ALKMEEVCEKWKPYRSVGSWYMWRLME 265
+ EV W+P+R+V +WY+WR +E
Sbjct: 181 RFEAREVSVAWRPWRTVATWYLWRSIE 207
>gi|226225775|ref|YP_002759881.1| DNA-3-methyladenine glycosylase [Gemmatimonas aurantiaca T-27]
gi|226088966|dbj|BAH37411.1| DNA-3-methyladenine glycosylase [Gemmatimonas aurantiaca T-27]
Length = 243
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 79/212 (37%), Positives = 122/212 (57%), Gaps = 8/212 (3%)
Query: 61 KPLTFKGEVDIALRHLRDKDPLLATLIDAHRPPTF--ESSRSPFLSLAKSILYQQLAYKA 118
KPLT + + A+ L ++D L I A P T + + F LA++I+YQQL+ A
Sbjct: 26 KPLTTR-RLTQAIAELSERDTRLGAAIAAVGPCTLLPRTEGTHFGHLARNIVYQQLSGSA 84
Query: 119 AKSIYTRFVALFNGEDNI-----LPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGI 173
A +I+ RF+ + + P++VL + LR G+S K ++DLA+ DG
Sbjct: 85 ATTIHGRFLKHVSAHLGVETEHPTPESVLGIDDDALRGCGLSVAKVRAIKDLAQHVIDGR 144
Query: 174 LSDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGL 233
L + + M D + L V+GIG W+ MF++F L +PDVLPV DLGVRKG Q +Y
Sbjct: 145 LPLDRLDVMSDQEIIDALVPVRGIGPWTAQMFLMFRLGRPDVLPVLDLGVRKGAQRIYRT 204
Query: 234 KELPGALKMEEVCEKWKPYRSVGSWYMWRLME 265
+ LP A ++E++ + W+P+ SV SWY WR+++
Sbjct: 205 RALPDAARLEKIAKTWRPWASVASWYCWRVLD 236
>gi|429334987|ref|ZP_19215634.1| DNA-3-methyladenine glycosylase II [Pseudomonas putida CSV86]
gi|428760394|gb|EKX82661.1| DNA-3-methyladenine glycosylase II [Pseudomonas putida CSV86]
Length = 219
Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 76/201 (37%), Positives = 122/201 (60%), Gaps = 4/201 (1%)
Query: 72 ALRHLRDKDPLLATLIDAHRPPTFES--SRSPFLSLAKSILYQQLAYKAAKSIYTRFVAL 129
A HLR + P A I+A P +R P+ +L ++I YQQL KAA++I RF+AL
Sbjct: 20 ASEHLRQQGPAWAAHIEAVGPCQHVPLPTRDPYQALVRAIAYQQLHAKAAEAILGRFLAL 79
Query: 130 FNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEM-DDVTMF 188
F G+ P+ +LA +P+ LR G S RK S ++ +A+ DG++ D + + +
Sbjct: 80 FPGQAFPSPEQLLATTPEHLRACGFSGRKISTVQAVAQGRLDGLVPDHDEARLLEHEVLV 139
Query: 189 KMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEK 248
+ LT + G+G W+V M +I++L + D+LPV D GVR+G + L+GL+ P ++ E+
Sbjct: 140 ERLTRLPGVGRWTVEMLLIYTLEQMDILPVDDFGVREGYRRLHGLEAQPTRKQLLELGAA 199
Query: 249 WKPYRSVGSWYMWRLMEAKGV 269
W PYR+V +WY+WR + A+G+
Sbjct: 200 WSPYRTVAAWYLWR-VPARGI 219
>gi|320588666|gb|EFX01134.1| DNA base-excision repair protein [Grosmannia clavigera kw1407]
Length = 394
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 100/289 (34%), Positives = 143/289 (49%), Gaps = 37/289 (12%)
Query: 3 KPNHTSDNISQNPSASSKITFPPRKIRKLTTITPITKIAEIPVATAISTNSDNSPKIFKP 62
KP H + + +P A++ P R + +K + AI D+S +I
Sbjct: 103 KPRHATVSRLADPKATNAPLLSPETSRLIVVSRFDSKSRSLAAGEAI----DDSQQI--- 155
Query: 63 LTFKGEVDIALRHLRDKDPLLATLIDAH-----RPPTFESSRSPFLSLAKSILYQQLAYK 117
T + +A HL DP + LID H P + PF SLA SI+ QQ++
Sbjct: 156 -TTDNILQVACEHLIAVDPRMKPLIDMHYCAAFSPESLAKKVDPFESLASSIISQQVSGA 214
Query: 118 AAKSIYTRFVALFN------GEDNIL-------PDAVLAVSPQQLREIGVSYRKASYLRD 164
AAK+I RF+ALF+ GE + P V + +LR G+S RKA Y++
Sbjct: 215 AAKAIKGRFIALFSDPGGTGGEAEVAVPVRFPHPSQVAVMPLDRLRTAGLSQRKAEYVQG 274
Query: 165 LAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVR 224
LAEK+ G LS + + E T+ + L +V+G+G WSV MF +F L + DV VGDLGV+
Sbjct: 275 LAEKFASGELSAQLLAEAPYETLVERLVAVRGLGLWSVEMFAMFGLKRMDVFSVGDLGVQ 334
Query: 225 KGLQVLYG-----LKELPGALK------MEEVCEKWKPYRSVGSWYMWR 262
+G+ G LK G K M+ + E ++PYRSV WYMWR
Sbjct: 335 RGMAAFAGRNVAKLKSGKGKWKYMKDTEMQTIAEPFRPYRSVFMWYMWR 383
>gi|196229700|ref|ZP_03128564.1| DNA-3-methyladenine glycosylase II [Chthoniobacter flavus Ellin428]
gi|196226026|gb|EDY20532.1| DNA-3-methyladenine glycosylase II [Chthoniobacter flavus Ellin428]
Length = 214
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 73/194 (37%), Positives = 112/194 (57%), Gaps = 3/194 (1%)
Query: 72 ALRHLRDKDPLLATLIDAHRPPTF--ESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVAL 129
A +L + ++ LI H P T E SPF +L +++ +QQL AA++I RF AL
Sbjct: 5 AHEYLTKRCKVMRRLIRTHGPCTLQPEKDHSPFRALVRAVAHQQLNGTAAETILRRFCAL 64
Query: 130 FNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGIL-SDESIVEMDDVTMF 188
F G+ + +V+ + LR G S+ K + LRD+A K DG + S +I +M+D +
Sbjct: 65 FPGKKFPTAKDLASVTDEALRGSGFSWAKIAALRDIAAKTLDGTIPSTRAIQKMNDAEII 124
Query: 189 KMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEK 248
+ L V+G+G W+V M +IF L +PDV P D G+R G +V YGL E+P ++ E+
Sbjct: 125 ERLVQVRGVGRWTVEMMLIFKLGRPDVFPADDFGIRDGFRVAYGLDEMPKPKEILAHAER 184
Query: 249 WKPYRSVGSWYMWR 262
W+PY + +WY WR
Sbjct: 185 WRPYATTAAWYFWR 198
>gi|389848249|ref|YP_006350488.1| DNA-3-methyladenine glycosylase [Haloferax mediterranei ATCC 33500]
gi|448618455|ref|ZP_21666692.1| DNA-3-methyladenine glycosylase [Haloferax mediterranei ATCC 33500]
gi|388245555|gb|AFK20501.1| DNA-3-methyladenine glycosylase [Haloferax mediterranei ATCC 33500]
gi|445746826|gb|ELZ98284.1| DNA-3-methyladenine glycosylase [Haloferax mediterranei ATCC 33500]
Length = 193
Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 78/194 (40%), Positives = 117/194 (60%), Gaps = 7/194 (3%)
Query: 70 DIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVAL 129
D A R LR DP L ++++ H P T + + PF L SI+ QQL+ AA++I R L
Sbjct: 3 DDAYRELR-TDPNLGSVVEDHGPLTLDPASDPFEQLVISIVNQQLSTTAAETIRNR---L 58
Query: 130 FNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFK 189
F+ + P+ +LA LR+ G+S +K Y+R+ A+ + DG LS ES+ MDD +
Sbjct: 59 FDRVEAT-PEGILAADETVLRDCGLSSQKVGYVRNAADAFQDG-LSTESLHAMDDDEVID 116
Query: 190 MLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGAL-KMEEVCEK 248
LT ++G+G W+ MF+IF L + DV PV DLG+R+G++ ++G E + +M E E+
Sbjct: 117 ALTEIRGVGVWTAKMFLIFVLAREDVFPVEDLGIRRGMEHVFGFDEDAVSRGEMRERAER 176
Query: 249 WKPYRSVGSWYMWR 262
W PYRS S Y+WR
Sbjct: 177 WTPYRSYASLYLWR 190
>gi|409359152|ref|ZP_11237504.1| methylated-DNA--protein-cysteine methyltransferase [Dietzia
alimentaria 72]
Length = 212
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 82/205 (40%), Positives = 115/205 (56%), Gaps = 6/205 (2%)
Query: 70 DIALRHLRDKDPLLATLIDAHRPPTFESS-----RSPFLSLAKSILYQQLAYKAAKSIYT 124
++A+RHLR D L IDA P T + + F LA S++ QQL+ KAA +I
Sbjct: 8 EVAVRHLRGADAQLRDFIDAAGPCTLTPAPDAGPHTLFDRLAGSVMSQQLSVKAAATISG 67
Query: 125 RFVALFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDG-ILSDESIVEMD 183
R + P V A+S ++LR G+S K + LRDLA+ G I + + + D
Sbjct: 68 RLRERATSGSQLDPALVAALSDEELRACGISRPKVASLRDLADAVETGRIPTLPELRKYD 127
Query: 184 DVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKME 243
D + LT+V+GIG W+V M +IF L +PDV PV D+GVR+GL+ + GL E M
Sbjct: 128 DDKVITSLTAVRGIGRWTVEMLLIFLLDRPDVFPVADVGVRRGLERVLGLSEKASPALML 187
Query: 244 EVCEKWKPYRSVGSWYMWRLMEAKG 268
E + W PYRSV SWY+WR ++ G
Sbjct: 188 ERSQAWAPYRSVASWYLWRAVDQAG 212
>gi|30248984|ref|NP_841054.1| HhH-GPD [Nitrosomonas europaea ATCC 19718]
gi|30138601|emb|CAD84892.1| HhH-GPD [Nitrosomonas europaea ATCC 19718]
Length = 205
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 68/194 (35%), Positives = 115/194 (59%), Gaps = 3/194 (1%)
Query: 72 ALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFN 131
A+ L +DP++ +I + E + F +LA++I+ QQ++ KAA S++ + L
Sbjct: 9 AVNDLSARDPVMHRIIQCYSDSMPEERGNAFATLARAIVGQQISVKAAASVWQKVTTLIP 68
Query: 132 GEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKML 191
I P+A++A LR G+S RK YLRDL+ + +G L + ++DD T+ + L
Sbjct: 69 ---EITPEALIATEIDLLRTCGLSARKVDYLRDLSRHFLEGTLVTVNWHDLDDETLIRKL 125
Query: 192 TSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKP 251
VKGIG W+ MF+IF LH+PDVLP+ D+G+++ + + Y + + + E W+P
Sbjct: 126 VEVKGIGRWTAEMFLIFHLHRPDVLPLDDIGLQRAVSLHYNASQPVAKQAIRTIAESWQP 185
Query: 252 YRSVGSWYMWRLME 265
+RSV +WY+WR ++
Sbjct: 186 WRSVATWYLWRSLD 199
>gi|219850496|ref|YP_002464929.1| DNA-3-methyladenine glycosylase II [Chloroflexus aggregans DSM
9485]
gi|219544755|gb|ACL26493.1| DNA-3-methyladenine glycosylase II [Chloroflexus aggregans DSM
9485]
Length = 199
Score = 144 bits (364), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 75/194 (38%), Positives = 122/194 (62%), Gaps = 7/194 (3%)
Query: 72 ALRHLRDKDPLLATLIDAHRPPTFESSRSP--FLSLAKSILYQQLAYKAAKSIYTRFVAL 129
AL +L DP+LA ID + +F R P F +LA +I+ QQL+ AA++I R L
Sbjct: 4 ALNYLCTVDPVLAPWID--QIGSFALQRQPHSFATLAYAIISQQLSLNAARAIRDRLTTL 61
Query: 130 FNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFK 189
GE + P+ +LA LR G+S +K+ YLRDLAE+ G ++ E + +DD T
Sbjct: 62 L-GE--LTPEQILAADTTALRAAGLSMQKSGYLRDLAERIVYGQINLELLPTLDDETAIA 118
Query: 190 MLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKW 249
MLT+V+GIG W+ ++++F+L++ D+LP DLG+R G +++Y L ++ ++ + E+W
Sbjct: 119 MLTNVRGIGRWTAEIYLMFALNRLDILPADDLGLRDGARLVYQLPQILSPRELRALGERW 178
Query: 250 KPYRSVGSWYMWRL 263
+PYRS+ WY+W++
Sbjct: 179 RPYRSIACWYLWQI 192
>gi|448474462|ref|ZP_21602321.1| HhH-GPD family protein [Halorubrum aidingense JCM 13560]
gi|445817769|gb|EMA67638.1| HhH-GPD family protein [Halorubrum aidingense JCM 13560]
Length = 198
Score = 144 bits (363), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 70/185 (37%), Positives = 109/185 (58%), Gaps = 4/185 (2%)
Query: 79 KDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNILP 138
+DP +A LID H P E + F L SI+ QQL+ +A +I+ R V +G + P
Sbjct: 11 EDPTMARLIDRHGPLAIEPADDAFARLCTSIVNQQLSTASASAIHGRMVDALDG--TVAP 68
Query: 139 DAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGI--LSDESIVEMDDVTMFKMLTSVKG 196
+++LA LRE G+S K YLR+ AE + D L+ + + DD + LT ++G
Sbjct: 69 ESLLAADEAALRETGLSGTKVEYLRNAAEAFRDDDRDLTRAGLADADDGAVVDRLTEIRG 128
Query: 197 IGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVG 256
+G W+ M++IF+L + DVLP+GDL VRKG++ +Y + +M E+ + W+PYRS G
Sbjct: 129 VGEWTARMYLIFALGREDVLPLGDLAVRKGIEQVYNDGDDLSRAEMREIGDAWRPYRSYG 188
Query: 257 SWYMW 261
+ Y+W
Sbjct: 189 TRYIW 193
>gi|433417078|ref|ZP_20404620.1| DNA-3-methyladenine glycosylase [Haloferax sp. BAB2207]
gi|432200152|gb|ELK56261.1| DNA-3-methyladenine glycosylase [Haloferax sp. BAB2207]
Length = 193
Score = 144 bits (363), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 77/197 (39%), Positives = 119/197 (60%), Gaps = 7/197 (3%)
Query: 70 DIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVAL 129
D A R LR DP L ++D H P + + + PF L SI+ QQL+ AA +I R L
Sbjct: 3 DDAYRELR-ADPHLGDVVDEHGPLSLDPADDPFERLVVSIVNQQLSTTAAATIRDR---L 58
Query: 130 FNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFK 189
F+ + P+ +LA LR+ G+S +K Y+R++A+ + DG LS ES+ EM D +
Sbjct: 59 FD-RVEVTPEGILAADEDVLRDCGLSNQKVGYVRNVADAFRDG-LSAESLREMGDGEVVS 116
Query: 190 MLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGAL-KMEEVCEK 248
LT ++G+G W+ MF+IF L + DV PV DLG+R+G++ ++G ++ + +M E E+
Sbjct: 117 ALTEIRGVGDWTAKMFLIFVLAREDVFPVEDLGIRRGMEHVFGFEQDAVSRGEMRERAER 176
Query: 249 WKPYRSVGSWYMWRLME 265
W PYRS S Y+WR ++
Sbjct: 177 WAPYRSYASRYLWRCVD 193
>gi|448583121|ref|ZP_21646590.1| DNA-3-methyladenine glycosylase [Haloferax gibbonsii ATCC 33959]
gi|445730078|gb|ELZ81670.1| DNA-3-methyladenine glycosylase [Haloferax gibbonsii ATCC 33959]
Length = 193
Score = 144 bits (363), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 78/199 (39%), Positives = 121/199 (60%), Gaps = 11/199 (5%)
Query: 70 DIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVAL 129
D A R LR DP L +++ H P + + + PF L SI+ QQL+ AA +I R L
Sbjct: 3 DDAYRELR-ADPHLGDVVEEHGPLSLDPADDPFERLVVSIVNQQLSTTAAATIRDR---L 58
Query: 130 FNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFK 189
F+ + P+ +LA LR+ G+S +K Y+R++A+ + DG LS ES+ +MDD +
Sbjct: 59 FD-RVEVTPEGILAADEAVLRDCGLSNQKVGYVRNVADAFRDG-LSAESLRKMDDDEVVA 116
Query: 190 MLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGAL---KMEEVC 246
LT ++G+G W+ MF+IF L + DV PV DLG+R+G++ ++G + P A+ +M E
Sbjct: 117 ALTEIRGVGDWTAKMFLIFVLAREDVFPVEDLGIRRGMEHVFGFE--PDAVSRGEMRERA 174
Query: 247 EKWKPYRSVGSWYMWRLME 265
E+W PYRS S Y+WR ++
Sbjct: 175 ERWAPYRSYASRYLWRCVD 193
>gi|437999854|ref|YP_007183587.1| DNA-3-methyladenine glucosyllase II [Candidatus
Kinetoplastibacterium blastocrithidii (ex Strigomonas
culicis)]
gi|451812758|ref|YP_007449211.1| DNA-3-methyladenine glycosylase II [Candidatus
Kinetoplastibacterium blastocrithidii TCC012E]
gi|429339088|gb|AFZ83510.1| DNA-3-methyladenine glucosyllase II [Candidatus
Kinetoplastibacterium blastocrithidii (ex Strigomonas
culicis)]
gi|451778727|gb|AGF49607.1| DNA-3-methyladenine glycosylase II [Candidatus
Kinetoplastibacterium blastocrithidii TCC012E]
Length = 207
Score = 144 bits (363), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 71/194 (36%), Positives = 117/194 (60%), Gaps = 2/194 (1%)
Query: 72 ALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFN 131
A+ L+ KD +L+ +I + F SS SPF++LA +I+ QQ++ K A ++ RFV +F
Sbjct: 15 AVSDLKKKDRILSRIIPLYSEKRFLSSDSPFITLAHAIISQQISSKLAGVVWDRFVKIFG 74
Query: 132 GEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKML 191
+ P ++ +L IG+ RK YL DLA + + +S E ++ MDD ++ L
Sbjct: 75 RLPS--PRDLIFAKGGELNSIGIPKRKVEYLHDLAYHFYENKVSTEKLINMDDESIISEL 132
Query: 192 TSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKP 251
+S+KGIG W+ MF+IF+L +PDV+P+ D+G+ + + + Y E + EV W+P
Sbjct: 133 SSIKGIGRWTAEMFLIFNLRRPDVMPLDDVGLIRAISIHYFSGEPVSRFEAREVSGAWRP 192
Query: 252 YRSVGSWYMWRLME 265
+R+V SWY+WR +E
Sbjct: 193 WRTVASWYLWRSIE 206
>gi|448600869|ref|ZP_21656248.1| DNA-3-methyladenine glycosylase [Haloferax alexandrinus JCM 10717]
gi|445734882|gb|ELZ86438.1| DNA-3-methyladenine glycosylase [Haloferax alexandrinus JCM 10717]
Length = 193
Score = 144 bits (362), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 77/197 (39%), Positives = 119/197 (60%), Gaps = 7/197 (3%)
Query: 70 DIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVAL 129
D A R LR DP L ++D H P + + + PF L SI+ QQL+ AA +I R L
Sbjct: 3 DDAYRELR-ADPHLGDVVDEHGPLSLDPADDPFERLVVSIVNQQLSTTAAATIRDR---L 58
Query: 130 FNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFK 189
F+ + P+ +LA LR+ G+S +K Y+R++A+ + DG LS E + EMDD +
Sbjct: 59 FD-RVEVTPEGILAADEDVLRDCGLSNQKVGYVRNVADAFRDG-LSAEWLREMDDGEVVA 116
Query: 190 MLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGAL-KMEEVCEK 248
LT ++G+G W+ MF+IF L + DV PV DLG+R+G++ ++G ++ + +M E E+
Sbjct: 117 ALTEIRGVGDWTAKMFLIFVLAREDVFPVEDLGIRRGMEHVFGFEQDAVSRGEMRERAER 176
Query: 249 WKPYRSVGSWYMWRLME 265
W PYRS S Y+WR ++
Sbjct: 177 WAPYRSYASRYLWRCVD 193
>gi|319950303|ref|ZP_08024222.1| putative DNA-3-methyladenine glycosylase [Dietzia cinnamea P4]
gi|319435995|gb|EFV91196.1| putative DNA-3-methyladenine glycosylase [Dietzia cinnamea P4]
Length = 212
Score = 144 bits (362), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 83/202 (41%), Positives = 114/202 (56%), Gaps = 6/202 (2%)
Query: 73 LRHLRDKDPLLATLIDAHRPPTFESS-----RSPFLSLAKSILYQQLAYKAAKSIYTRFV 127
+R+LRD DP L I A P T ++ + F LA SIL QQL+ KAA +I R
Sbjct: 1 MRYLRDADPELGAHIGAVGPCTLAAAPDAGPHTLFDRLASSILSQQLSVKAAATIAGRLR 60
Query: 128 ALFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDG-ILSDESIVEMDDVT 186
+ P V +S ++LR G+S K + LRDLA+ G I S ++ E DD
Sbjct: 61 ERATSAGQLDPVRVALLSDEELRACGISRPKVAALRDLADAVRTGRIPSLAALREYDDDE 120
Query: 187 MFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVC 246
+ LT+V+GIG W+V M +IF L +PDV PV D+GVR+G + + GL+E M E
Sbjct: 121 VVDALTTVRGIGRWTVEMQLIFLLDRPDVFPVSDVGVRRGFERVLGLEEKASPDLMLERA 180
Query: 247 EKWKPYRSVGSWYMWRLMEAKG 268
+W PYRSV SWY+WR ++ G
Sbjct: 181 RRWAPYRSVASWYLWRAVDQTG 202
>gi|212528646|ref|XP_002144480.1| DNA-3-methyladenine glycosylase, putative [Talaromyces marneffei
ATCC 18224]
gi|210073878|gb|EEA27965.1| DNA-3-methyladenine glycosylase, putative [Talaromyces marneffei
ATCC 18224]
Length = 389
Score = 144 bits (362), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 88/238 (36%), Positives = 125/238 (52%), Gaps = 33/238 (13%)
Query: 61 KPLTFKGEV-DIALRHLRDKDPLLATLIDAHR-----PPTFESSRSPFLSLAKSILYQQL 114
+P+ G + + AL HL D L +ID H P E PF SL SI+ QQ+
Sbjct: 145 RPIATTGTLLEKALEHLVSVDARLKPVIDQHHCHLFSPEGLEEKIDPFDSLVSSIIGQQV 204
Query: 115 AYKAAKSIYTRFVALFNGEDNILPDAV-------LAVSPQQ--------LREIGVSYRKA 159
+ AA+SI +F+ LF+ E + +P A L +P Q LR G+S RKA
Sbjct: 205 SGAAARSIKNKFLDLFDNESDDMPAATDVTKTKRLFPTPAQVAKLDIPTLRTAGLSQRKA 264
Query: 160 SYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVG 219
Y++ LAEK+ +G LS + ++ D + +ML +V+G+G WSV MF F+L + DV G
Sbjct: 265 EYIQGLAEKFANGELSTQKLLRASDEDVMEMLIAVRGLGRWSVEMFSCFALKRTDVFSTG 324
Query: 220 DLGVRKGLQVLYG-----LKELPGA-------LKMEEVCEKWKPYRSVGSWYMWRLME 265
DLGV++G G LK G M E+ EK++PYRS+ WYMWR+ E
Sbjct: 325 DLGVQRGCAAFVGRDVNKLKAKGGGKFKYMSESDMLELAEKFRPYRSLFMWYMWRVEE 382
>gi|448499252|ref|ZP_21611266.1| HhH-GPD family protein [Halorubrum coriense DSM 10284]
gi|445697589|gb|ELZ49651.1| HhH-GPD family protein [Halorubrum coriense DSM 10284]
Length = 212
Score = 144 bits (362), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 73/184 (39%), Positives = 104/184 (56%), Gaps = 4/184 (2%)
Query: 80 DPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNILPD 139
DP +ATLID H P + F L SI+ QQL+ +A +I RFV + G+ PD
Sbjct: 26 DPTMATLIDRHGPLDVAPADDEFARLCTSIVNQQLSTASAAAIRERFVGVLGGDPT--PD 83
Query: 140 AVLAVSPQQLREIGVSYRKASYLRDLAEKYTDG--ILSDESIVEMDDVTMFKMLTSVKGI 197
VLA LRE G+S K YLR++A + D + E + E D + LT + G+
Sbjct: 84 RVLAADRAALREAGLSGTKVEYLRNVAAAFRDDERDFTREGLAEASDEAVVDRLTEITGV 143
Query: 198 GAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGS 257
G W+ M++IF+L + DVLP+GDL VR+G + +Y E +M E+ E W+PYRS G+
Sbjct: 144 GPWTARMYLIFALGREDVLPLGDLAVRRGFEQIYNGGESLSRAEMREIGEAWRPYRSYGT 203
Query: 258 WYMW 261
Y+W
Sbjct: 204 RYVW 207
>gi|448534544|ref|ZP_21621753.1| HhH-GPD family protein [Halorubrum hochstenium ATCC 700873]
gi|445704519|gb|ELZ56433.1| HhH-GPD family protein [Halorubrum hochstenium ATCC 700873]
Length = 201
Score = 143 bits (360), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 75/194 (38%), Positives = 110/194 (56%), Gaps = 5/194 (2%)
Query: 70 DIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVAL 129
D L LR +DP +A L+D H P + F L SI+ QQL+ +A +I RFV +
Sbjct: 6 DPVLSTLR-EDPTMAALVDRHGPLDVTPADDEFARLCTSIVNQQLSTASAAAIRERFVDV 64
Query: 130 FNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDG--ILSDESIVEMDDVTM 187
GE P+ VLA LRE G+S K YLR++A + D + E + D T+
Sbjct: 65 LGGEPT--PEGVLAADETALREAGLSGTKVEYLRNVAAAFRDDERAFTREELAGESDATV 122
Query: 188 FKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCE 247
LT ++G+G W+ M++IF+L + DVLP+GDL VRKG++ +Y E +M ++ E
Sbjct: 123 VDRLTEIRGVGEWTARMYLIFALGREDVLPLGDLAVRKGIERVYNDGEELSRAEMRDIAE 182
Query: 248 KWKPYRSVGSWYMW 261
W+PYRS G+ Y+W
Sbjct: 183 SWRPYRSYGTRYVW 196
>gi|448440128|ref|ZP_21588376.1| HhH-GPD family protein [Halorubrum saccharovorum DSM 1137]
gi|445690645|gb|ELZ42855.1| HhH-GPD family protein [Halorubrum saccharovorum DSM 1137]
Length = 198
Score = 143 bits (360), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 71/185 (38%), Positives = 109/185 (58%), Gaps = 4/185 (2%)
Query: 79 KDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNILP 138
+DP +A LID H P E + F L SI+ QQL+ +A +I+ RF+ + G+ P
Sbjct: 11 EDPTMARLIDRHGPLAVEPAGDEFSRLCTSIVNQQLSTASAAAIHERFLDVLGGDPT--P 68
Query: 139 DAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGI--LSDESIVEMDDVTMFKMLTSVKG 196
+ VLA LRE G+S K YLR++A + DG L+ E + + D LT ++G
Sbjct: 69 NLVLAADEDDLREAGLSGTKVEYLREVAAAFRDGDRELTREGLADASDDEAVAALTEIRG 128
Query: 197 IGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVG 256
+G W+ M++IF+L + DVLP+GDL VRKG++ +Y + +M E+ + W+PYRS G
Sbjct: 129 VGEWTARMYLIFALGREDVLPLGDLAVRKGIEQVYNDGDELTRAEMREIGDAWRPYRSYG 188
Query: 257 SWYMW 261
+ Y+W
Sbjct: 189 TRYVW 193
>gi|340386670|ref|XP_003391831.1| PREDICTED: DNA-3-methyladenine glycosylase 1-like [Amphimedon
queenslandica]
Length = 211
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 82/202 (40%), Positives = 119/202 (58%), Gaps = 9/202 (4%)
Query: 70 DIALRHLRDKDPLLATLIDA---HRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRF 126
D+A+ LR DP L +IDA RP RSPF +L +SI+YQQL+ KAAK+I+TR
Sbjct: 7 DLAITELRGCDPDLGRIIDAIEPRRPQKRGEMRSPFDALLRSIVYQQLSGKAAKTIHTRL 66
Query: 127 VALFNGEDNILPDA--VLAVSPQQLREIGVSYRKASYLRDLAEKYT-DGILSDESIVEMD 183
+ALF G P A +LA+ + LR G+S K +RDLA K + S E + M
Sbjct: 67 LALFPGRR---PSARSLLAMDDETLRSAGLSRPKIVAVRDLAAKVCAREVPSKEKLQTMT 123
Query: 184 DVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKME 243
+ + L ++GIG W+V M +IF+L + D+LP DLGVR+G + + +P ++
Sbjct: 124 SDAIIERLVKIRGIGQWTVEMLLIFNLDRADILPATDLGVRRGFMLCRKNESMPEPQELL 183
Query: 244 EVCEKWKPYRSVGSWYMWRLME 265
E E+ +P+RSV +WY+WR E
Sbjct: 184 EEGERRRPWRSVAAWYLWRACE 205
>gi|336253977|ref|YP_004597084.1| HhH-GPD family protein [Halopiger xanaduensis SH-6]
gi|335337966|gb|AEH37205.1| HhH-GPD family protein [Halopiger xanaduensis SH-6]
Length = 203
Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 72/192 (37%), Positives = 115/192 (59%), Gaps = 7/192 (3%)
Query: 79 KDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNILP 138
+DP++ LI+AH P E S + L SI+ QQL+ +A ++ R L GE + P
Sbjct: 11 RDPIMERLIEAHEP-YVEPDWSEYERLCISIINQQLSTASAMAVRERVFELLEGE--VTP 67
Query: 139 DAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIG 198
+ VLA LR+ G+S K Y+R+ A + + + +++ + D + +LT +KGIG
Sbjct: 68 ETVLAAEDDALRDAGLSRSKIEYMRNAARAFQENDYTRDALADYSDEEVIDLLTEIKGIG 127
Query: 199 AWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGAL---KMEEVCEKWKPYRSV 255
W+ +M+++F L +PDVLP+GDL VR+G++ LYG E P + +M E+ E W+PYRSV
Sbjct: 128 EWTANMYLLFVLERPDVLPLGDLAVRRGIEQLYGDGE-PDEMTPAEMREIAEAWRPYRSV 186
Query: 256 GSWYMWRLMEAK 267
+ Y+W EA+
Sbjct: 187 ATRYIWAEYEAE 198
>gi|429463246|ref|YP_007184709.1| DNA-3-methyladenine glycosylase [Candidatus Kinetoplastibacterium
crithidii (ex Angomonas deanei ATCC 30255)]
gi|451811302|ref|YP_007447757.1| DNA-3-methyladenine glycosylase II [Candidatus
Kinetoplastibacterium crithidii TCC036E]
gi|429338760|gb|AFZ83183.1| DNA-3-methyladenine glycosylase [Candidatus Kinetoplastibacterium
crithidii (ex Angomonas deanei ATCC 30255)]
gi|451776460|gb|AGF47459.1| DNA-3-methyladenine glycosylase II [Candidatus
Kinetoplastibacterium crithidii TCC036E]
Length = 207
Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 69/194 (35%), Positives = 114/194 (58%), Gaps = 2/194 (1%)
Query: 72 ALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFN 131
A+ L+ KD +L +I S PFL+L + IL QQ++ KAA +I+ +F+ L
Sbjct: 16 AVSQLKKKDRILRKVIPLCEDKVLLSPSPPFLTLVRLILAQQISVKAAATIWNKFINLVG 75
Query: 132 GEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKML 191
N P + ++S + LR IGVS RK YL+DLA+ + + + E ++MDD ++ L
Sbjct: 76 ESPN--PKLISSMSGELLRNIGVSKRKIDYLKDLADYFNNSSVCPEKWLKMDDESIISEL 133
Query: 192 TSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKP 251
+ +KG+G W+ MF+IF++ +PD++P+ D G+ K + Y E + EV W+P
Sbjct: 134 SRIKGVGRWTAEMFLIFNMQRPDIMPLDDFGLLKAISTHYFSGEPVSRFEAREVSVAWRP 193
Query: 252 YRSVGSWYMWRLME 265
+R+V +WY+WR +E
Sbjct: 194 WRTVATWYLWRSIE 207
>gi|406932694|gb|EKD67591.1| hypothetical protein ACD_48C00323G0001 [uncultured bacterium]
Length = 201
Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 70/191 (36%), Positives = 111/191 (58%), Gaps = 1/191 (0%)
Query: 75 HLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGED 134
H DP+L++LI + S + FLSL + I+ QQLA AA++I+ RF LF E
Sbjct: 9 HFNSVDPILSSLIPLSDNIAIQHSENYFLSLCREIITQQLAGGAARAIFGRFEKLFTTE- 67
Query: 135 NILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSV 194
+ + +L + Q +R+ G S+ K Y++ LA+ I+ + E+ D + + L V
Sbjct: 68 TVTAEKILLIPDQIIRDTGASWAKVKYIKSLAQCVVSKIIHLNKLNELSDAEVIEELVKV 127
Query: 195 KGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRS 254
KGIG W+ MF++FSL + DV GDLG+R LQ LY +K+ P +ME++ KW PYR+
Sbjct: 128 KGIGPWTAEMFLMFSLGREDVFSFGDLGLRHSLQKLYKMKKEPTVKQMEKITSKWSPYRT 187
Query: 255 VGSWYMWRLME 265
G+ +W+ ++
Sbjct: 188 YGALLLWKSLD 198
>gi|448622832|ref|ZP_21669481.1| DNA-3-methyladenine glycosylase [Haloferax denitrificans ATCC
35960]
gi|445753340|gb|EMA04757.1| DNA-3-methyladenine glycosylase [Haloferax denitrificans ATCC
35960]
Length = 193
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 76/197 (38%), Positives = 119/197 (60%), Gaps = 7/197 (3%)
Query: 70 DIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVAL 129
D A R LR DP L +++ H P + + + PF L SI+ QQL+ AA +I R L
Sbjct: 3 DDAYRELR-ADPHLGDVVEEHGPLSLDPADDPFERLVVSIVNQQLSTTAAATIRDR---L 58
Query: 130 FNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFK 189
F+ + + P+ +LA LR+ G+S +K Y+R++AE + DG LS ES+ M+D +
Sbjct: 59 FDRVE-VTPEGILAADEAVLRDCGLSNQKVGYVRNVAEAFRDG-LSAESLRAMNDDEVVA 116
Query: 190 MLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGL-KELPGALKMEEVCEK 248
LT ++G+G W+ MF+IF L + DV PV DLG+R+G++ ++G ++ +M E E+
Sbjct: 117 ALTEIRGVGDWTAKMFLIFVLAREDVFPVEDLGIRRGMEHVFGFERDAVSRGEMRERAER 176
Query: 249 WKPYRSVGSWYMWRLME 265
W PYRS S Y+WR ++
Sbjct: 177 WAPYRSYASRYLWRCVD 193
>gi|171058354|ref|YP_001790703.1| HhH-GPD family protein [Leptothrix cholodnii SP-6]
gi|170775799|gb|ACB33938.1| HhH-GPD family protein [Leptothrix cholodnii SP-6]
Length = 216
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 73/213 (34%), Positives = 124/213 (58%), Gaps = 5/213 (2%)
Query: 54 DNSPKIFKPLTFKGEVDIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQ 113
D++P + P G D A RHL +D ++ LI +S F +LA+SI+ QQ
Sbjct: 2 DSAPSLVAP----GYWDDACRHLVKRDRVMKNLIPRFGEARLQSRGDAFTTLARSIVGQQ 57
Query: 114 LAYKAAKSIYTRFVAL-FNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDG 172
++ K+A++++ RF+AL + + PD + ++ +R G+S RK YLRDLA + +
Sbjct: 58 ISVKSAQAVWGRFIALSVDPTAPLTPDWLQGLAIDSMRAAGLSARKVDYLRDLANHFLER 117
Query: 173 ILSDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYG 232
+ + + MDD + + L +++GIG W+ MF+IF L +P+VLP+ D+G+ KG+ + Y
Sbjct: 118 SVHETDWLSMDDEAIIEELVAIRGIGRWTAEMFLIFHLMRPNVLPLDDVGLIKGISLNYF 177
Query: 233 LKELPGALKMEEVCEKWKPYRSVGSWYMWRLME 265
E + EV + W P+RSV +WY+WR ++
Sbjct: 178 SGEPVSRAEAREVGDAWAPFRSVATWYIWRSLD 210
>gi|33592951|ref|NP_880595.1| DNA-3-methyladenine glycosylase [Bordetella pertussis Tohama I]
gi|384204249|ref|YP_005589988.1| DNA-3-methyladenine glycosylase [Bordetella pertussis CS]
gi|408414907|ref|YP_006625614.1| DNA-3-methyladenine glycosylase [Bordetella pertussis 18323]
gi|410419429|ref|YP_006899878.1| DNA-3-methyladenine glycosylase [Bordetella bronchiseptica MO149]
gi|410472140|ref|YP_006895421.1| DNA-3-methyladenine glycosylase [Bordetella parapertussis Bpp5]
gi|427820328|ref|ZP_18987391.1| DNA-3-methyladenine glycosylase [Bordetella bronchiseptica D445]
gi|427824699|ref|ZP_18991761.1| DNA-3-methyladenine glycosylase [Bordetella bronchiseptica Bbr77]
gi|33572599|emb|CAE42191.1| DNA-3-methyladenine glycosylase [Bordetella pertussis Tohama I]
gi|332382363|gb|AEE67210.1| DNA-3-methyladenine glycosylase [Bordetella pertussis CS]
gi|401777077|emb|CCJ62333.1| DNA-3-methyladenine glycosylase [Bordetella pertussis 18323]
gi|408442250|emb|CCJ48772.1| DNA-3-methyladenine glycosylase [Bordetella parapertussis Bpp5]
gi|408446724|emb|CCJ58394.1| DNA-3-methyladenine glycosylase [Bordetella bronchiseptica MO149]
gi|410571328|emb|CCN19553.1| DNA-3-methyladenine glycosylase [Bordetella bronchiseptica D445]
gi|410589964|emb|CCN05040.1| DNA-3-methyladenine glycosylase [Bordetella bronchiseptica Bbr77]
Length = 214
Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 74/200 (37%), Positives = 112/200 (56%), Gaps = 2/200 (1%)
Query: 70 DIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVAL 129
D A+ HL +D +L +I H S SPF++LA++I+ QQ++ KAA +++ RF+
Sbjct: 15 DDAVAHLMRRDRILKRIIPQHGETWLTSRGSPFVTLARAIIGQQISVKAADALWQRFLET 74
Query: 130 FNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFK 189
P VL LR G+S RKA YL DLA + ++ E MDD +
Sbjct: 75 VGKRPT--PATVLRAGVPALRAAGLSQRKAEYLVDLATHFGQRLVHPEKWAAMDDEAVIA 132
Query: 190 MLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKW 249
L +++GIG W+ MF+IF+L +PDVLP+ DLG+ K + + Y E + EV W
Sbjct: 133 ELVAIRGIGRWTAEMFLIFNLQRPDVLPLDDLGLLKAISLHYFSGEPVSRFEAREVSLAW 192
Query: 250 KPYRSVGSWYMWRLMEAKGV 269
+P+R+V +WY+WR +E V
Sbjct: 193 QPWRTVATWYLWRSLEPAAV 212
>gi|448465818|ref|ZP_21598938.1| HhH-GPD family protein [Halorubrum kocurii JCM 14978]
gi|445814885|gb|EMA64839.1| HhH-GPD family protein [Halorubrum kocurii JCM 14978]
Length = 198
Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 72/185 (38%), Positives = 108/185 (58%), Gaps = 4/185 (2%)
Query: 79 KDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNILP 138
+DP +A LID H P T E + F L SI+ QQL+ +A +I+ RFV + + P
Sbjct: 11 EDPTMARLIDRHGPLTVEPAGDEFARLCTSIVNQQLSTASAAAIHERFVDVLGADPT--P 68
Query: 139 DAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGI--LSDESIVEMDDVTMFKMLTSVKG 196
D VLA LR G+S K YLR++A + DG L+ + + + D + LT ++G
Sbjct: 69 DLVLAADEGALRGAGLSGTKVEYLRNVAAAFRDGDRDLTRQGLADAGDEAVVDALTEIRG 128
Query: 197 IGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVG 256
+G W+ M++IF+L + DVLP GDL VRKG++ +Y + +M E+ E W+PYRS G
Sbjct: 129 VGEWTARMYLIFALGREDVLPPGDLAVRKGIERVYNDGDELTRAEMREIGEAWRPYRSYG 188
Query: 257 SWYMW 261
+ Y+W
Sbjct: 189 TRYVW 193
>gi|163857763|ref|YP_001632061.1| hypothetical protein Bpet3450 [Bordetella petrii DSM 12804]
gi|163261491|emb|CAP43793.1| unnamed protein product [Bordetella petrii]
Length = 214
Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 72/201 (35%), Positives = 115/201 (57%), Gaps = 3/201 (1%)
Query: 72 ALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFN 131
A+ HL +D +L LI H + +PF++LA++I+ QQ++ KA +++ R +
Sbjct: 17 AVAHLMRRDRILKKLIPQHAEAWLTTRSTPFVTLARAIVGQQISNKAGDALWQRLLEAVG 76
Query: 132 GEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKML 191
P VL LR+ G+S RK YL+DLA + + + E MDD ++ L
Sbjct: 77 KRPT--PAGVLGAGTPALRQAGLSQRKCEYLQDLAVHFGERRVHPEKWAAMDDESVVSEL 134
Query: 192 TSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKP 251
+++GIG W+ MF+IF+L +PDVLP+ DLG+ K + + Y E + EV W+P
Sbjct: 135 VAIRGIGRWTAEMFLIFNLQRPDVLPLDDLGLLKAISLHYFSGEPVSRFEAREVSSAWQP 194
Query: 252 YRSVGSWYMWRLMEAKGVLPN 272
+R+V +WY+WR +E+K V PN
Sbjct: 195 WRTVATWYLWRSLESKPV-PN 214
>gi|167031754|ref|YP_001666985.1| DNA-3-methyladenine glycosylase II [Pseudomonas putida GB-1]
gi|166858242|gb|ABY96649.1| DNA-3-methyladenine glycosylase II [Pseudomonas putida GB-1]
Length = 208
Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 74/213 (34%), Positives = 123/213 (57%), Gaps = 12/213 (5%)
Query: 53 SDNSPKIFKPLTFKGEVDIALRHLRDKDPLLATLIDAHRPPTFE--SSRSPFLSLAKSIL 110
+D SP+ ++ T HL DP + I A P + S R P+ +L ++I
Sbjct: 4 ADLSPEAYREATA---------HLASLDPDWSRHIAATGPCLHQATSGREPYEALVRAIA 54
Query: 111 YQQLAYKAAKSIYTRFVALFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYT 170
YQQL +AA++I R +ALF P+ +LAV+PQ LR G S K + ++ +A+
Sbjct: 55 YQQLHARAAEAILGRLLALFPANAFPQPEQLLAVTPQTLRACGFSASKLATIQGIAQASL 114
Query: 171 DGIL-SDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQV 229
+G++ + E + M D + + L +++G+G W+V M +I+SL + D+LPV D GVR+G +
Sbjct: 115 EGLVPTREQALAMADEALIERLVALRGVGRWTVEMLLIYSLERSDILPVDDFGVREGYRR 174
Query: 230 LYGLKELPGALKMEEVCEKWKPYRSVGSWYMWR 262
L GL++ P +M + W+P+R+V +WY+WR
Sbjct: 175 LKGLEKAPTPAQMRSLGGAWRPFRTVAAWYLWR 207
>gi|448427753|ref|ZP_21584028.1| HhH-GPD family protein [Halorubrum terrestre JCM 10247]
gi|445677647|gb|ELZ30146.1| HhH-GPD family protein [Halorubrum terrestre JCM 10247]
Length = 198
Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 72/185 (38%), Positives = 106/185 (57%), Gaps = 4/185 (2%)
Query: 79 KDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNILP 138
+DP +A L+D H P + F L SI+ QQL+ +A +I RF+ + GE P
Sbjct: 11 EDPTMAALVDRHGPLDVAPADDEFGRLCTSIVNQQLSTASANAIRERFLDVLGGEPT--P 68
Query: 139 DAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDG--ILSDESIVEMDDVTMFKMLTSVKG 196
D VLA LRE G+S K YLR++A + D + E + + D + LT ++G
Sbjct: 69 DRVLAADEDALREAGLSGTKVEYLRNVATAFRDDERDFTREGLAGVSDEAVADRLTEIRG 128
Query: 197 IGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVG 256
+G W+ MF+IF+L + DVLP+GDL VRKG++ +Y E +M E+ E W+PYRS G
Sbjct: 129 VGEWTARMFLIFALGREDVLPLGDLAVRKGIEQVYHSGEELSRAEMREIGEAWRPYRSYG 188
Query: 257 SWYMW 261
+ Y+W
Sbjct: 189 TRYIW 193
>gi|406959007|gb|EKD86476.1| hypothetical protein ACD_37C00275G0005 [uncultured bacterium]
Length = 198
Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 73/199 (36%), Positives = 120/199 (60%), Gaps = 1/199 (0%)
Query: 69 VDIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVA 128
+D AL+H + D +L + P FE S F+SL + I+ QQL+ K A I+ RF
Sbjct: 1 MDKALKHFKKVDLVLYEIGLKIEPLEFEKSNDYFVSLTREIIGQQLSGKVADVIFERFKD 60
Query: 129 LFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMF 188
LF + I +L + Q+LR++G S+ K S+L+DLAEK + G + ++I +++ +
Sbjct: 61 LFP-KKKITARYLLTIPDQRLRDVGTSWGKVSFLKDLAEKVSGGEVDLKTIDNLENEKVT 119
Query: 189 KMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEK 248
++L +KG+G W+ MF++F+L +PDV GDLG++ + LY LK+ P K+ E+ K
Sbjct: 120 ELLLKIKGVGPWTAEMFLMFALQRPDVFSTGDLGLQNAIIKLYKLKDKPSHNKLLEISAK 179
Query: 249 WKPYRSVGSWYMWRLMEAK 267
W P+R++ S +WR +E K
Sbjct: 180 WSPHRTIASRILWRSLELK 198
>gi|448491356|ref|ZP_21608297.1| HhH-GPD family protein [Halorubrum californiensis DSM 19288]
gi|445693127|gb|ELZ45289.1| HhH-GPD family protein [Halorubrum californiensis DSM 19288]
Length = 217
Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 72/189 (38%), Positives = 107/189 (56%), Gaps = 4/189 (2%)
Query: 80 DPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNILPD 139
DP +A L+D H P + F L SI+ QQL+ +A +I RF+ + G+ PD
Sbjct: 31 DPTMAALVDRHGPLDIAPADDEFGRLCTSIVNQQLSTASADAIRERFLEVLGGDPT--PD 88
Query: 140 AVLAVSPQQLREIGVSYRKASYLRDLAEKYTDG--ILSDESIVEMDDVTMFKMLTSVKGI 197
VLA LRE G+S K YLR++A+ + D + E + + D + LT +KG+
Sbjct: 89 RVLAADEAALREAGLSATKVEYLRNVADAFRDDERDFTREGLAGVSDEAVVDRLTEIKGV 148
Query: 198 GAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGS 257
GAW+ M++IF+L + DVLP+GDL VRKG++ +Y E M E+ W+PYRS G+
Sbjct: 149 GAWTARMYLIFALGREDVLPLGDLAVRKGIEQVYNDGEELSRADMREIGAAWRPYRSYGT 208
Query: 258 WYMWRLMEA 266
Y+W E+
Sbjct: 209 RYIWAAYES 217
>gi|163845842|ref|YP_001633886.1| DNA-3-methyladenine glycosylase II [Chloroflexus aurantiacus
J-10-fl]
gi|222523553|ref|YP_002568023.1| DNA-3-methyladenine glycosylase II [Chloroflexus sp. Y-400-fl]
gi|163667131|gb|ABY33497.1| DNA-3-methyladenine glycosylase II [Chloroflexus aurantiacus
J-10-fl]
gi|222447432|gb|ACM51698.1| DNA-3-methyladenine glycosylase II [Chloroflexus sp. Y-400-fl]
Length = 198
Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 71/191 (37%), Positives = 112/191 (58%), Gaps = 3/191 (1%)
Query: 72 ALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFN 131
AL+HLR+ DP L I+ P T + F +LA +I+ QQL+ AA++I R
Sbjct: 4 ALQHLRNVDPTLGHWIEQIGPYTLQRQPHGFATLAYAIISQQLSLVAARTIRDRLNERLG 63
Query: 132 GEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKML 191
++ P+ ++A LR G+S +K+SYLRDLAE+ G L + +DD T L
Sbjct: 64 ---SLAPETIIAADETVLRAAGLSAQKSSYLRDLAERVMSGQLDLNLLPTLDDETAITHL 120
Query: 192 TSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKP 251
+VKGIG W+ ++++F+L + DVLP DLG+R ++++Y LP ++ E+W+P
Sbjct: 121 MTVKGIGRWTAEIYLMFALERLDVLPAADLGLRDAVRLIYDQPRLPKPQELRTFGERWRP 180
Query: 252 YRSVGSWYMWR 262
YRS+ WY+W+
Sbjct: 181 YRSIACWYLWQ 191
>gi|33596887|ref|NP_884530.1| DNA-3-methyladenine glycosylase [Bordetella parapertussis 12822]
gi|33600721|ref|NP_888281.1| DNA-3-methyladenine glycosylase [Bordetella bronchiseptica RB50]
gi|412339089|ref|YP_006967844.1| DNA-3-methyladenine glycosylase [Bordetella bronchiseptica 253]
gi|427813893|ref|ZP_18980957.1| DNA-3-methyladenine glycosylase [Bordetella bronchiseptica 1289]
gi|33568321|emb|CAE32233.1| DNA-3-methyladenine glycosylase [Bordetella bronchiseptica RB50]
gi|33573588|emb|CAE37582.1| DNA-3-methyladenine glycosylase [Bordetella parapertussis]
gi|408768923|emb|CCJ53696.1| DNA-3-methyladenine glycosylase [Bordetella bronchiseptica 253]
gi|410564893|emb|CCN22441.1| DNA-3-methyladenine glycosylase [Bordetella bronchiseptica 1289]
Length = 214
Score = 141 bits (356), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 74/200 (37%), Positives = 112/200 (56%), Gaps = 2/200 (1%)
Query: 70 DIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVAL 129
D A+ HL +D +L +I H S SPF++LA++I+ QQ++ KAA +++ RF+
Sbjct: 15 DDAVAHLMRRDRILKRIIPQHGETWLTSRGSPFVTLARAIIGQQISVKAADALWQRFLET 74
Query: 130 FNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFK 189
P VL LR G+S RKA YL DLA + ++ E MDD +
Sbjct: 75 VGKRPT--PATVLRAGLPALRAAGLSQRKAEYLVDLATHFGQRLVHPEKWAAMDDEAVIA 132
Query: 190 MLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKW 249
L +++GIG W+ MF+IF+L +PDVLP+ DLG+ K + + Y E + EV W
Sbjct: 133 ELVAIRGIGRWTAEMFLIFNLQRPDVLPLDDLGLLKAISLHYFSGEPVSRFEAREVSLAW 192
Query: 250 KPYRSVGSWYMWRLMEAKGV 269
+P+R+V +WY+WR +E V
Sbjct: 193 QPWRTVATWYLWRSLEPAAV 212
>gi|429849223|gb|ELA24627.1| DNA-3-methyladenine [Colletotrichum gloeosporioides Nara gc5]
Length = 372
Score = 141 bits (356), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 92/260 (35%), Positives = 130/260 (50%), Gaps = 28/260 (10%)
Query: 34 ITPITK--IAEIPVATAISTNSDNSPKIFKPLTFKGEVDIALRHLRDKDPLLATLIDAHR 91
I+P T +A P+ T + N+P K T ++ A RHL + DP + LI+ +
Sbjct: 106 ISPETSRVLASDPIEAPSPTKAANAPATGKRTTTANILEEACRHLIEVDPRMKPLIEKNY 165
Query: 92 PPTFESSR-----SPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDN----------I 136
F PF SL I+ QQ++ AA+SI +F+ALF+ EDN
Sbjct: 166 CRVFSQEGLAEKIDPFESLCSGIISQQVSGAAARSIKNKFIALFSDEDNGEAEKPKKKFP 225
Query: 137 LPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKG 196
P V S ++LR G+S RKA Y++ LAEK+ G L+ + E + L +V+G
Sbjct: 226 QPSEVAPTSIERLRTAGLSQRKAEYVKGLAEKFASGELTATMLAEAPYEEVRDKLIAVRG 285
Query: 197 IGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYG-----LKELPGALK------MEEV 245
+G WSV MF F L + DV +GDLGV++G+ G LK G K M E+
Sbjct: 286 LGLWSVEMFACFGLKRMDVFSLGDLGVQRGMAAFVGRDVAKLKAKGGKWKYMSEKEMAEM 345
Query: 246 CEKWKPYRSVGSWYMWRLME 265
+ PYRSV WYMWR+ E
Sbjct: 346 ASPFAPYRSVFMWYMWRVEE 365
>gi|242765840|ref|XP_002341055.1| DNA-3-methyladenine glycosylase, putative [Talaromyces stipitatus
ATCC 10500]
gi|218724251|gb|EED23668.1| DNA-3-methyladenine glycosylase, putative [Talaromyces stipitatus
ATCC 10500]
Length = 382
Score = 141 bits (356), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 89/243 (36%), Positives = 125/243 (51%), Gaps = 31/243 (12%)
Query: 54 DNSPK---IFKPLTFKGEV-DIALRHLRDKDPLLATLIDAHR-----PPTFESSRSPFLS 104
D SP + +P+ G + + AL HL D L LI+ H P PF S
Sbjct: 132 DTSPSKTGLPRPIATTGNLLEKALEHLTSVDARLKPLIEQHHCRIFSPEGLAEQIDPFDS 191
Query: 105 LAKSILYQQLAYKAAKSIYTRFVALFNGEDNILPDA-----------VLAVSPQQLREIG 153
L SI+ QQ++ AAKSI +F+ LF+ ++ DA V + LR G
Sbjct: 192 LISSIMAQQVSGAAAKSIKNKFLDLFDSSKDVQTDAEGKRRFPTPAQVAKLDIPTLRTAG 251
Query: 154 VSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKP 213
+S RKA Y++ LAEK+ G LS + ++ D + +ML +V+G+G WSV MF F+L +
Sbjct: 252 LSQRKAEYVQGLAEKFASGELSTQKLLRASDEEVMEMLIAVRGLGRWSVEMFSCFALKRT 311
Query: 214 DVLPVGDLGVRKGLQVLYG-----LKELPGALK------MEEVCEKWKPYRSVGSWYMWR 262
DV GDLGV++G G LK G K M E+ EK++PYRS+ WYMWR
Sbjct: 312 DVFSTGDLGVQRGCAAFVGKDVNKLKAKGGKFKYMSESDMLELAEKFRPYRSLFMWYMWR 371
Query: 263 LME 265
+ E
Sbjct: 372 VEE 374
>gi|77458383|ref|YP_347888.1| DNA-3-methyladenine glycosylase II [Pseudomonas fluorescens Pf0-1]
gi|77382386|gb|ABA73899.1| DNA-3-methyladenine glycosylase 1 [Pseudomonas fluorescens Pf0-1]
Length = 208
Score = 141 bits (355), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 72/191 (37%), Positives = 112/191 (58%), Gaps = 10/191 (5%)
Query: 74 RHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGE 133
RH+ P L H+P +R P+ SL ++I YQQL KA +I R V LF G+
Sbjct: 21 RHIAAVGPCL------HQP---HPTRDPYESLVRAIAYQQLHAKAGDAIVGRLVGLFPGQ 71
Query: 134 DNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSD-ESIVEMDDVTMFKMLT 192
P+ +LA QLR G S K + ++ +A+ DG++ D + + M+D + + L
Sbjct: 72 TFPRPEQILATDFDQLRGCGFSAGKIATIQGIAQATLDGVVPDYPTALAMEDEALIERLV 131
Query: 193 SVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPY 252
S++G+G W+V M +I+SL +PD+LP D GVR+G + L GL+ P +M E+ WKP+
Sbjct: 132 SLRGVGRWTVEMLLIYSLERPDILPADDFGVREGYRRLKGLEVQPARKQMIEIGLDWKPF 191
Query: 253 RSVGSWYMWRL 263
R+V +WY+WR+
Sbjct: 192 RTVAAWYLWRV 202
>gi|448355694|ref|ZP_21544443.1| HhH-GPD family protein [Natrialba hulunbeirensis JCM 10989]
gi|445634402|gb|ELY87581.1| HhH-GPD family protein [Natrialba hulunbeirensis JCM 10989]
Length = 209
Score = 141 bits (355), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 68/187 (36%), Positives = 110/187 (58%), Gaps = 3/187 (1%)
Query: 80 DPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNILPD 139
DP++ L+DAH P E + + L SI+ QQL+ +A ++ R + ED + P+
Sbjct: 12 DPVMDQLVDAH-DPYVEPDWTEYERLCISIINQQLSTASAAAVRERVFDVL--EDEVSPE 68
Query: 140 AVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIGA 199
VLA Q LR+ G+S K Y+R+ A + + + + ++D+ + LT +KGIG
Sbjct: 69 TVLAADDQALRDAGLSRSKVDYIRNAARAFQEQDFTRAGLADVDNDEVVDRLTEIKGIGE 128
Query: 200 WSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSWY 259
W+ M+++F L +PD+LP+GDL VR+G++ LYG E +M ++ E W+PYRSV + Y
Sbjct: 129 WTARMYLLFVLERPDILPLGDLAVRRGIEQLYGNGEELTRAEMRDIAEDWRPYRSVATRY 188
Query: 260 MWRLMEA 266
+W EA
Sbjct: 189 IWAEYEA 195
>gi|257061458|ref|YP_003139346.1| HhH-GPD family protein [Cyanothece sp. PCC 8802]
gi|256591624|gb|ACV02511.1| HhH-GPD family protein [Cyanothece sp. PCC 8802]
Length = 206
Score = 141 bits (355), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 71/194 (36%), Positives = 115/194 (59%), Gaps = 3/194 (1%)
Query: 72 ALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFN 131
A +L DKD +LA LI + T + +PF +L K+I+ QQ++ AA +I R +L
Sbjct: 10 AKEYLADKDKILAYLISLYPDETIINYHNPFYTLVKAIIGQQISVNAANAISKRLESLLG 69
Query: 132 GEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKML 191
I + LA+ + LR+ G+S K SY+ ++A+ + GIL+ + M D + L
Sbjct: 70 ---TISIETYLAMDSEALRQCGLSRPKISYITNIAQAFEQGILTPQIWPMMSDQEVISQL 126
Query: 192 TSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKP 251
S+KGIG W+ MF+IF LH+ D+LP+ DLG+ +Q YG + +++E+ + WKP
Sbjct: 127 ISIKGIGLWTAQMFLIFHLHRSDILPLADLGLINAIQRHYGQSQRLTKGEIQELSQAWKP 186
Query: 252 YRSVGSWYMWRLME 265
YR+V +WY+WR ++
Sbjct: 187 YRTVATWYLWRSLD 200
>gi|448602349|ref|ZP_21656405.1| DNA-3-methyladenine glycosylase [Haloferax sulfurifontis ATCC
BAA-897]
gi|445747864|gb|ELZ99318.1| DNA-3-methyladenine glycosylase [Haloferax sulfurifontis ATCC
BAA-897]
Length = 193
Score = 140 bits (354), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 75/197 (38%), Positives = 119/197 (60%), Gaps = 7/197 (3%)
Query: 70 DIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVAL 129
D A R LR DP L +++ H P + + + PF L SI+ QQL+ AA +I R L
Sbjct: 3 DDAYRELR-ADPHLGDVVEEHGPLSLDPADDPFERLVVSIVNQQLSTTAAATIRDR---L 58
Query: 130 FNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFK 189
F+ + + P+ +LA LR+ G+S +K Y+R++A+ + DG LS ES+ M+D +
Sbjct: 59 FDRVE-VTPEGILAADEAVLRDCGLSNQKVGYVRNVADAFRDG-LSAESLRAMNDDEVVA 116
Query: 190 MLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGL-KELPGALKMEEVCEK 248
LT ++G+G W+ MF+IF L + DV PV DLG+R+G++ ++G ++ +M E E+
Sbjct: 117 ALTEIRGVGDWTAKMFLIFVLAREDVFPVEDLGIRRGMEHVFGFERDAVSRGEMRERAER 176
Query: 249 WKPYRSVGSWYMWRLME 265
W PYRS S Y+WR ++
Sbjct: 177 WAPYRSYASRYLWRCVD 193
>gi|392405300|ref|YP_006441912.1| HhH-GPD family protein [Turneriella parva DSM 21527]
gi|390613254|gb|AFM14406.1| HhH-GPD family protein [Turneriella parva DSM 21527]
Length = 211
Score = 140 bits (354), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 70/197 (35%), Positives = 116/197 (58%), Gaps = 1/197 (0%)
Query: 70 DIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVAL 129
D A HL+ D LA +I + + F +LA++I+ QQ++ KAA SI+ R VA
Sbjct: 9 DTATTHLQRSDKTLAAIIAKYPEVKLRLKKDSFTTLARAIVGQQISVKAADSIWARVVAA 68
Query: 130 FNGE-DNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMF 188
G I P +LA++ + LR G+S RK SYL++L+E+Y G L+ + + M D +
Sbjct: 69 AQGRMTKIDPAKILALNTKALRACGLSERKVSYLQNLSERYVSGHLNGQKLARMQDAEVK 128
Query: 189 KMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEK 248
K L ++ GIG W+ M+M+F+L +PD+LP+GD+G+ + +++ Y K+ +
Sbjct: 129 KTLVALHGIGPWTADMYMMFNLWRPDILPLGDVGLVRAIELHYFEGRKVPLEKVRKTAAP 188
Query: 249 WKPYRSVGSWYMWRLME 265
W PY +V +WY+WR ++
Sbjct: 189 WSPYATVATWYLWRSLD 205
>gi|94312696|ref|YP_585905.1| DNA-3-methyladenine glycosylase [Cupriavidus metallidurans CH34]
gi|93356548|gb|ABF10636.1| DNA-3-methyladenine glycosylase [Cupriavidus metallidurans CH34]
Length = 218
Score = 140 bits (354), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 75/207 (36%), Positives = 119/207 (57%), Gaps = 7/207 (3%)
Query: 60 FKPLTFKGEVDIALRHLRDKDPLLATLIDAHRPPTFES--SRSPFLSLAKSILYQQLAYK 117
PL ++ A++ L + D A I A P E+ +R P+ +L ++I YQQL +
Sbjct: 13 LSPLAYRR----AVKFLSELDEDWALHIAAIGPCRHEAKPAREPYEALVRAIAYQQLHAR 68
Query: 118 AAKSIYTRFVALFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSD- 176
A +I R +AL+ G P+ +LA P+ R G S K + +R +A+ +G++ +
Sbjct: 69 AGDAILGRLLALYPGVSFPAPEQLLASDPELQRACGFSAEKLATIRRIAQATVEGLVPNL 128
Query: 177 ESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKEL 236
E + D + + LTS++G+G W+V MF+I+SL + DVLPV D GVR+G L GL+
Sbjct: 129 EEARRLPDTALIERLTSLRGVGRWTVEMFLIYSLERSDVLPVDDFGVREGYGRLKGLERA 188
Query: 237 PGALKMEEVCEKWKPYRSVGSWYMWRL 263
P +M E+ E W P+R+V +WY+WRL
Sbjct: 189 PTPRQMREIGEAWSPFRTVAAWYLWRL 215
>gi|399001184|ref|ZP_10703902.1| HhH-GPD superfamily base excision DNA repair protein [Pseudomonas
sp. GM18]
gi|398128377|gb|EJM17768.1| HhH-GPD superfamily base excision DNA repair protein [Pseudomonas
sp. GM18]
Length = 205
Score = 140 bits (354), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 70/191 (36%), Positives = 113/191 (59%), Gaps = 10/191 (5%)
Query: 74 RHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGE 133
RH+ P L H+P ++R P+ SL ++I YQQL KA +I R +ALF
Sbjct: 21 RHISAIGPCL------HQP---HAARDPYESLVRAIAYQQLHAKAGDAIVGRLLALFPTS 71
Query: 134 DNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSD-ESIVEMDDVTMFKMLT 192
P+ +LA +Q+R G S K + ++ +A+ DG++ D + + MDD + + L
Sbjct: 72 TFPRPEQILATDFEQMRGCGFSASKIATIQGIAQAALDGVVPDYATALAMDDEALIERLI 131
Query: 193 SVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPY 252
+++G+G W+V M +I+SL +PDVLP D GVR+G + L GL++ P +M ++ W PY
Sbjct: 132 TLRGVGRWTVEMLLIYSLERPDVLPADDFGVREGYRRLKGLEQQPSRKQMIDIGRAWSPY 191
Query: 253 RSVGSWYMWRL 263
R+V +WY+WR+
Sbjct: 192 RTVAAWYLWRV 202
>gi|303276907|ref|XP_003057747.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226460404|gb|EEH57698.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 178
Score = 140 bits (354), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 70/174 (40%), Positives = 102/174 (58%), Gaps = 14/174 (8%)
Query: 102 FLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDN---ILPDAVLAVSPQQLREIGVSYRK 158
F SLA++I++QQL AA +I+ R + ED+ + P+A + LR G+S RK
Sbjct: 1 FRSLARAIVFQQLNGAAAATIFGRVRSAVGAEDDETAMTPEAFARAKDEDLRACGLSARK 60
Query: 159 ASYLRDLAEKYTDG-----------ILSDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMI 207
YLR LA +++ G L+D+++ M D L +KGIG WSVHMF +
Sbjct: 61 LEYLRGLAARFSSGDDDDDDDGRRPALTDDALEAMSDEKTTATLLELKGIGEWSVHMFQM 120
Query: 208 FSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSWYMW 261
F L++PDVLPV D GVR+G+ + YGL++ P KM E+ W PY+++ S YMW
Sbjct: 121 FYLNRPDVLPVKDFGVRQGMMIAYGLRDPPKEEKMREIAASWAPYKTLASMYMW 174
>gi|325980945|ref|YP_004293347.1| HhH-GPD family protein [Nitrosomonas sp. AL212]
gi|325530464|gb|ADZ25185.1| HhH-GPD family protein [Nitrosomonas sp. AL212]
Length = 205
Score = 140 bits (354), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 69/194 (35%), Positives = 113/194 (58%), Gaps = 3/194 (1%)
Query: 72 ALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFN 131
A + L D ++ LI S F +LA+SI+ QQ++ KAA+S++ + +
Sbjct: 9 ATQELAGCDQVMQQLIQQFENAALISRGCAFTTLARSIVGQQISVKAAESVWQKIIGAIP 68
Query: 132 GEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKML 191
+I P + A P LR G+S RK +YL+DL+ + +G L++ V MDD T+ L
Sbjct: 69 ---DIAPHTITAQEPDALRACGLSARKITYLQDLSRHFMEGKLNETGWVGMDDETIIAQL 125
Query: 192 TSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKP 251
+ +KGIG W+ MF+IF L +PDVLP+ D+G+++ + + Y K+ M E+ W+P
Sbjct: 126 SKIKGIGRWTAEMFLIFHLQRPDVLPLDDIGLQRAISLHYFDKQTVDKKIMLELARPWQP 185
Query: 252 YRSVGSWYMWRLME 265
+RSV +WY+WR ++
Sbjct: 186 WRSVATWYLWRSLD 199
>gi|448460392|ref|ZP_21597217.1| HhH-GPD family protein [Halorubrum lipolyticum DSM 21995]
gi|445807133|gb|EMA57219.1| HhH-GPD family protein [Halorubrum lipolyticum DSM 21995]
Length = 198
Score = 140 bits (354), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 71/185 (38%), Positives = 107/185 (57%), Gaps = 4/185 (2%)
Query: 79 KDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNILP 138
+DP +A LID H P E + F L SI+ QQL+ +A +I+ RFV + + P
Sbjct: 11 EDPTMARLIDRHGPLAVEPAGDEFARLCTSIVNQQLSTASAAAIHERFVDVLGADPT--P 68
Query: 139 DAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGI--LSDESIVEMDDVTMFKMLTSVKG 196
D VLA LRE G+S K YLR++A + DG L+ E + + D + LT ++G
Sbjct: 69 DLVLAADESDLREAGLSGTKVEYLRNVAAAFRDGDRDLTREGLADASDEAVVDALTEIRG 128
Query: 197 IGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVG 256
+G W+ M++I +L + DVLP+GDL VRKG++ +Y +M ++ E W+PYRS G
Sbjct: 129 VGEWTARMYLISALGREDVLPLGDLAVRKGIEQVYNDGGELTRAEMRDIGEAWRPYRSYG 188
Query: 257 SWYMW 261
+ Y+W
Sbjct: 189 TRYVW 193
>gi|398978558|ref|ZP_10687881.1| 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase
[Pseudomonas sp. GM25]
gi|398136958|gb|EJM26032.1| 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase
[Pseudomonas sp. GM25]
Length = 208
Score = 140 bits (354), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 72/191 (37%), Positives = 112/191 (58%), Gaps = 10/191 (5%)
Query: 74 RHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGE 133
RH+ P L H+P +R P+ SL ++I YQQL KA +I R V LF G+
Sbjct: 21 RHIAAIGPCL------HQP---HPARDPYESLVRAIAYQQLHAKAGDAIVGRLVGLFPGQ 71
Query: 134 DNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSD-ESIVEMDDVTMFKMLT 192
P+ +LA QLR G S K + ++ +A+ DG++ D + + M+D + + L
Sbjct: 72 TFPRPEQILATDFDQLRGCGFSTGKIATIQGIAQATLDGVVPDYATALAMEDEALIERLV 131
Query: 193 SVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPY 252
S++G+G W+V M +I+SL +PD+LP D GVR+G + L GL+ P +M E+ WKP+
Sbjct: 132 SLRGVGRWTVEMLLIYSLERPDILPADDFGVREGYRRLKGLEVQPTRRQMIEIGLDWKPF 191
Query: 253 RSVGSWYMWRL 263
R+V +WY+WR+
Sbjct: 192 RTVAAWYLWRV 202
>gi|448453445|ref|ZP_21593788.1| HhH-GPD family protein [Halorubrum litoreum JCM 13561]
gi|445807245|gb|EMA57330.1| HhH-GPD family protein [Halorubrum litoreum JCM 13561]
Length = 198
Score = 140 bits (353), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 72/185 (38%), Positives = 106/185 (57%), Gaps = 4/185 (2%)
Query: 79 KDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNILP 138
+DP +A L+D H P + F L SI+ QQL+ +A +I RF+ + GE P
Sbjct: 11 EDPTMAALVDRHGPLDVAPADDEFGRLCTSIVNQQLSTASANAIRERFLDVLGGEPT--P 68
Query: 139 DAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDG--ILSDESIVEMDDVTMFKMLTSVKG 196
D VLA LRE G+S K YLR++A + D + E + + D + LT ++G
Sbjct: 69 DRVLAADEDALREPGLSGTKVEYLRNVATAFRDDERDFTREGLAGVSDEAVADRLTEIRG 128
Query: 197 IGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVG 256
+G W+ MF+IF+L + DVLP+GDL VRKG++ +Y E +M E+ E W+PYRS G
Sbjct: 129 VGEWTARMFLIFALGREDVLPLGDLAVRKGIEQVYHSGEELSRAEMREIGEAWRPYRSYG 188
Query: 257 SWYMW 261
+ Y+W
Sbjct: 189 TRYIW 193
>gi|398883862|ref|ZP_10638810.1| HhH-GPD superfamily base excision DNA repair protein [Pseudomonas
sp. GM60]
gi|398195904|gb|EJM82929.1| HhH-GPD superfamily base excision DNA repair protein [Pseudomonas
sp. GM60]
Length = 205
Score = 140 bits (353), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 72/191 (37%), Positives = 112/191 (58%), Gaps = 10/191 (5%)
Query: 74 RHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGE 133
RH+ P L H+P ++R P+ SL ++I YQQL KA +I R +ALF
Sbjct: 21 RHIAAIGPCL------HQP---HAARDPYESLVRAIAYQQLHAKAGDAIVGRLLALFPST 71
Query: 134 DNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSD-ESIVEMDDVTMFKMLT 192
P+ +LA QLR G S K + ++ +A+ DG++ D + + MDD + + L
Sbjct: 72 AFPRPEQILATGFDQLRGCGFSASKIATIQGIAQAALDGVVPDYATALAMDDEALIERLI 131
Query: 193 SVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPY 252
+++G+G W+V M +I+SL +PD+LP D GVR+G + L GL+ P +M E+ W+PY
Sbjct: 132 TLRGVGRWTVEMLLIYSLERPDILPADDFGVREGYRRLKGLEVQPTRKQMVEIGLGWRPY 191
Query: 253 RSVGSWYMWRL 263
R+V SWY+WR+
Sbjct: 192 RTVASWYLWRV 202
>gi|218247208|ref|YP_002372579.1| DNA-3-methyladenine glycosylase II [Cyanothece sp. PCC 8801]
gi|218167686|gb|ACK66423.1| DNA-3-methyladenine glycosylase II [Cyanothece sp. PCC 8801]
Length = 206
Score = 140 bits (353), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 71/194 (36%), Positives = 115/194 (59%), Gaps = 3/194 (1%)
Query: 72 ALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFN 131
A +L DKD +LA LI + T + +PF +L K+I+ QQ++ AA +I R +L
Sbjct: 10 AKEYLADKDKILAYLISLYPDETIINYHNPFYTLVKAIIGQQISVNAANAISKRLESLLG 69
Query: 132 GEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKML 191
I + LA+ + LR+ G+S K SY+ ++A+ + GIL+ + M D + L
Sbjct: 70 ---TISIETYLAMDSEALRQCGLSRPKISYITNIAQAFEQGILTPQIWPMMSDQEVISQL 126
Query: 192 TSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKP 251
S+KGIG W+ MF+IF LH+ D+LP+ DLG+ +Q YG + +++E+ + WKP
Sbjct: 127 ISIKGIGLWTAQMFLIFHLHRSDILPLADLGLINAIQRHYGQSQRLTKGEIQELSQVWKP 186
Query: 252 YRSVGSWYMWRLME 265
YR+V +WY+WR ++
Sbjct: 187 YRTVATWYLWRSLD 200
>gi|448504638|ref|ZP_21613979.1| HhH-GPD family protein [Halorubrum distributum JCM 9100]
gi|448519127|ref|ZP_21617903.1| HhH-GPD family protein [Halorubrum distributum JCM 10118]
gi|445701848|gb|ELZ53820.1| HhH-GPD family protein [Halorubrum distributum JCM 9100]
gi|445704143|gb|ELZ56061.1| HhH-GPD family protein [Halorubrum distributum JCM 10118]
Length = 198
Score = 140 bits (353), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 71/185 (38%), Positives = 106/185 (57%), Gaps = 4/185 (2%)
Query: 79 KDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNILP 138
+DP +A L+D H P + F L SI+ QQL+ +A +I RF+ + G+ P
Sbjct: 11 EDPTMAALVDRHGPLDVAPADDEFGRLCTSIVNQQLSTASANAIRERFLDVLGGDPT--P 68
Query: 139 DAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDG--ILSDESIVEMDDVTMFKMLTSVKG 196
D VLA LRE G+S K YLR++A + D + E + + D + LT ++G
Sbjct: 69 DRVLAAEEDALREAGLSGTKVEYLRNVATAFRDDERDFTREGLAGVSDEAVADRLTEIRG 128
Query: 197 IGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVG 256
+G W+ MF+IF+L + DVLP+GDL VRKG++ +Y E +M E+ E W+PYRS G
Sbjct: 129 VGEWTARMFLIFALGREDVLPLGDLAVRKGIEQVYHSGEKLSRAEMREIGEAWRPYRSYG 188
Query: 257 SWYMW 261
+ Y+W
Sbjct: 189 TRYIW 193
>gi|398922522|ref|ZP_10660314.1| HhH-GPD superfamily base excision DNA repair protein [Pseudomonas
sp. GM49]
gi|398162605|gb|EJM50793.1| HhH-GPD superfamily base excision DNA repair protein [Pseudomonas
sp. GM49]
Length = 205
Score = 140 bits (353), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 71/191 (37%), Positives = 111/191 (58%), Gaps = 10/191 (5%)
Query: 74 RHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGE 133
RH+ P L H+P ++R P+ SL ++I YQQL KA +I R +ALF
Sbjct: 21 RHIDAIGPCL------HQP---HAARDPYESLVRAIAYQQLHAKAGDAIVGRLLALFGSG 71
Query: 134 DNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSD-ESIVEMDDVTMFKMLT 192
P+ ++A QLR G S K + ++ +A+ DG++ D + + MDD + + L
Sbjct: 72 SFPRPEQIVATDFDQLRSCGFSASKITTIQGIAQASLDGVVPDYATALAMDDEALIERLI 131
Query: 193 SVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPY 252
+++G+G W+V M +I+SL +PD+LP D GVR+G + L GL+ P +M E+ W PY
Sbjct: 132 TLRGVGRWTVEMLLIYSLERPDILPADDFGVREGYRRLKGLQVQPTRKQMIEIGSAWSPY 191
Query: 253 RSVGSWYMWRL 263
R+V SWY+WR+
Sbjct: 192 RTVASWYLWRV 202
>gi|431800748|ref|YP_007227651.1| DNA-3-methyladenine glycosylase II [Pseudomonas putida HB3267]
gi|430791513|gb|AGA71708.1| DNA-3-methyladenine glycosylase II [Pseudomonas putida HB3267]
Length = 208
Score = 140 bits (353), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 76/213 (35%), Positives = 123/213 (57%), Gaps = 12/213 (5%)
Query: 53 SDNSPKIFKPLTFKGEVDIALRHLRDKDPLLATLIDAHRPPTFESS--RSPFLSLAKSIL 110
SD SP+ ++ T +L DP + I+A P +++ R P+ L ++I
Sbjct: 4 SDLSPEAYREAT---------EYLAALDPDWSRHIEATGPCLHQATPGREPYEVLVRAIA 54
Query: 111 YQQLAYKAAKSIYTRFVALFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYT 170
YQQL +AA++I R +ALF P+ +LAV+PQ +R G S K + ++ +A+
Sbjct: 55 YQQLHARAAEAILGRLLALFPEASFPGPEQLLAVAPQTMRACGFSASKMATIQGIAQGRL 114
Query: 171 DGIL-SDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQV 229
DG++ S E + M D + + L +++G+G W+V M +I+SL + DVLPV D GVR+G +
Sbjct: 115 DGLVPSREEALAMADEALIERLVALRGVGRWTVEMLLIYSLARSDVLPVDDFGVREGYRR 174
Query: 230 LYGLKELPGALKMEEVCEKWKPYRSVGSWYMWR 262
L GL + P +M + W+PYR+V +WY+WR
Sbjct: 175 LKGLDKAPTPAQMRSLGGGWRPYRTVAAWYLWR 207
>gi|398924045|ref|ZP_10661017.1| HhH-GPD superfamily base excision DNA repair protein [Pseudomonas
sp. GM48]
gi|398174002|gb|EJM61812.1| HhH-GPD superfamily base excision DNA repair protein [Pseudomonas
sp. GM48]
Length = 205
Score = 140 bits (353), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 71/191 (37%), Positives = 111/191 (58%), Gaps = 10/191 (5%)
Query: 74 RHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGE 133
RH+ P L H+P ++R P+ SL ++I YQQL KA +I R +ALF
Sbjct: 21 RHIDAIGPCL------HQP---HAARDPYESLVRAIAYQQLHAKAGDAIVGRLLALFGSG 71
Query: 134 DNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSD-ESIVEMDDVTMFKMLT 192
P+ ++A QLR G S K + ++ +A+ DG++ D + + MDD + + L
Sbjct: 72 SFPRPEQIVATDFDQLRSCGFSASKITTIQGIAQASLDGVVPDYTTALAMDDEALIERLI 131
Query: 193 SVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPY 252
+++G+G W+V M +I+SL +PD+LP D GVR+G + L GL+ P +M E+ W PY
Sbjct: 132 TLRGVGRWTVEMLLIYSLERPDILPADDFGVREGYRRLKGLQVQPTRKQMIEIGSAWSPY 191
Query: 253 RSVGSWYMWRL 263
R+V SWY+WR+
Sbjct: 192 RTVASWYLWRV 202
>gi|148545984|ref|YP_001266086.1| DNA-3-methyladenine glycosylase II [Pseudomonas putida F1]
gi|148510042|gb|ABQ76902.1| DNA-3-methyladenine glycosylase II [Pseudomonas putida F1]
Length = 207
Score = 140 bits (353), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 71/194 (36%), Positives = 118/194 (60%), Gaps = 3/194 (1%)
Query: 72 ALRHLRDKDPLLATLIDAHRPPTFESS--RSPFLSLAKSILYQQLAYKAAKSIYTRFVAL 129
A +HL DP + I A P +++ R P+ +L ++I YQQL +AA++I R +AL
Sbjct: 13 ATQHLAALDPDWSRHIAAIGPCLHQATPRREPYEALVRAIAYQQLHARAAEAILGRLLAL 72
Query: 130 FNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGIL-SDESIVEMDDVTMF 188
F +D P+ +LAVSP+ LR G S K ++ +A+ +G++ + E + M D +
Sbjct: 73 FPADDFPQPEQLLAVSPETLRACGFSASKLVTVQGIAQATLEGLVPTREQALTMADEALI 132
Query: 189 KMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEK 248
+ L +++G+G W+V M +I+SL + D+LPV D GVR+G + L GL+ P +M +
Sbjct: 133 ERLVALRGVGRWTVEMLLIYSLGRSDILPVDDFGVREGYRRLKGLETAPTPAQMRSLGGA 192
Query: 249 WKPYRSVGSWYMWR 262
W+P+R+V +WY+WR
Sbjct: 193 WRPFRTVAAWYLWR 206
>gi|311107716|ref|YP_003980569.1| hhH-GPD superfamily base excision DNA repair family protein
[Achromobacter xylosoxidans A8]
gi|310762405|gb|ADP17854.1| hhH-GPD superfamily base excision DNA repair family protein
[Achromobacter xylosoxidans A8]
Length = 214
Score = 140 bits (352), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 74/197 (37%), Positives = 119/197 (60%), Gaps = 4/197 (2%)
Query: 70 DIALRHLRDKDPLLATLIDAHRPPTFESSR-SPFLSLAKSILYQQLAYKAAKSIYTRFVA 128
+ A+ HL +D +L +I H P + +SR +PF++LA++I+ QQ++ KAA +++T+F+
Sbjct: 15 EAAVAHLMRRDRILKKIIPQH-PEVWLTSRGTPFVTLARAIIGQQVSSKAADTVWTQFIE 73
Query: 129 LFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMF 188
P AVL V + LR G+S RKA Y+ DLA + + + E MDD +
Sbjct: 74 AVGKRPT--PVAVLRVGLEGLRAAGLSQRKAEYVLDLAVHFGERRVHPEKWAAMDDEAVI 131
Query: 189 KMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEK 248
LT+++GIG W+ MF+IF+L +PDVLP+ D G+ K + + Y E + EV
Sbjct: 132 SELTAIRGIGRWTAEMFLIFNLQRPDVLPLDDPGLLKAISLHYFSGEPVSRFEAREVSLA 191
Query: 249 WKPYRSVGSWYMWRLME 265
W+P+R+V +WY+WR +E
Sbjct: 192 WQPWRTVATWYLWRSLE 208
>gi|26987441|ref|NP_742866.1| DNA-3-methyladenine glycosylase II [Pseudomonas putida KT2440]
gi|24982102|gb|AAN66330.1|AE016261_7 DNA-3-methyladenine glycosylase [Pseudomonas putida KT2440]
Length = 208
Score = 140 bits (352), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 71/194 (36%), Positives = 118/194 (60%), Gaps = 3/194 (1%)
Query: 72 ALRHLRDKDPLLATLIDAHRPPTFESS--RSPFLSLAKSILYQQLAYKAAKSIYTRFVAL 129
A +HL DP + I A P +++ R P+ +L ++I YQQL +AA++I R +AL
Sbjct: 14 AAQHLAALDPDWSRHIAAIGPCLHQATPGREPYEALVRAIAYQQLHARAAEAILGRLLAL 73
Query: 130 FNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGIL-SDESIVEMDDVTMF 188
F +D P+ +LAVSP+ LR G S K ++ +A+ +G++ + E + M D +
Sbjct: 74 FPADDFPQPEQLLAVSPETLRACGFSASKLVTVQGIAQATLEGLVPTREQALTMADEALI 133
Query: 189 KMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEK 248
+ L +++G+G W+V M +I+SL + D+LPV D GVR+G + L GL+ P +M +
Sbjct: 134 ERLVALRGVGRWTVEMLLIYSLGRSDILPVDDFGVREGYRRLKGLETAPTPAQMRSLGGA 193
Query: 249 WKPYRSVGSWYMWR 262
W+P+R+V +WY+WR
Sbjct: 194 WRPFRTVAAWYLWR 207
>gi|398842762|ref|ZP_10599936.1| HhH-GPD superfamily base excision DNA repair protein [Pseudomonas
sp. GM102]
gi|398105354|gb|EJL95461.1| HhH-GPD superfamily base excision DNA repair protein [Pseudomonas
sp. GM102]
Length = 205
Score = 140 bits (352), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 70/191 (36%), Positives = 113/191 (59%), Gaps = 10/191 (5%)
Query: 74 RHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGE 133
RH+ P L H+P ++R P+ SL ++I YQQL KA +I R +ALF
Sbjct: 21 RHINAIGPCL------HQP---HAARDPYESLVRAIAYQQLHAKAGDAIVGRLLALFPSS 71
Query: 134 DNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSD-ESIVEMDDVTMFKMLT 192
P+ +LA +Q+R G S K + ++ +A+ DG++ D + + MDD + + L
Sbjct: 72 TFPRPEQILATDFEQMRGCGFSASKIATIQGIAQAALDGVVPDYATALAMDDEALIERLI 131
Query: 193 SVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPY 252
+++G+G W+V M +I+SL +PD+LP D GVR+G + L GL+ P +M E+ W+PY
Sbjct: 132 TLRGVGRWTVEMLLIYSLERPDILPADDFGVREGYRRLKGLEMQPTRKQMIEIGLAWRPY 191
Query: 253 RSVGSWYMWRL 263
R+V +WY+WR+
Sbjct: 192 RTVAAWYLWRV 202
>gi|78066400|ref|YP_369169.1| DNA-3-methyladenine glycosylase II [Burkholderia sp. 383]
gi|77967145|gb|ABB08525.1| DNA-3-methyladenine glycosylase II [Burkholderia sp. 383]
Length = 214
Score = 140 bits (352), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 76/217 (35%), Positives = 123/217 (56%), Gaps = 12/217 (5%)
Query: 50 STNSDNSPKIFKPLTFKGEVDIALRHLRDKDPLLATLIDAHRPPTFES--SRSPFLSLAK 107
+ ++D SP+ ++ A + L D D A+ I P E+ +R P+ +L +
Sbjct: 4 TISADLSPRAYRK---------AAQFLSDFDKDWASHIAKIGPCRHEAKPAREPYEALVR 54
Query: 108 SILYQQLAYKAAKSIYTRFVALFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAE 167
+I YQQL KA +I R +AL+ G D P+ +L+ P R G S K + +R +A+
Sbjct: 55 AIAYQQLHAKAGDAILGRLLALYPGTDFPAPEQLLSTDPALQRACGFSATKLATIRSIAQ 114
Query: 168 KYTDGIL-SDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKG 226
D I+ S + + D T+ + L +++G+G W+V MF+I+SL + D+LPV D GVR+G
Sbjct: 115 ATVDEIVPSLDEARRLPDATLIERLITLRGVGRWTVEMFLIYSLERSDILPVDDFGVREG 174
Query: 227 LQVLYGLKELPGALKMEEVCEKWKPYRSVGSWYMWRL 263
L GL++ P +M ++ E W PYR+V +WY+WRL
Sbjct: 175 YGRLKGLEKAPTPRQMRDIGEAWSPYRTVAAWYLWRL 211
>gi|302388846|ref|YP_003824667.1| HhH-GPD family protein [Thermosediminibacter oceani DSM 16646]
gi|302199474|gb|ADL07044.1| HhH-GPD family protein [Thermosediminibacter oceani DSM 16646]
Length = 218
Score = 140 bits (352), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 79/201 (39%), Positives = 116/201 (57%), Gaps = 4/201 (1%)
Query: 61 KPLTFKGEVDIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAK 120
K L F+ + D AL+ L D +A LI + E F SL +SI+ QQL+ KAA
Sbjct: 6 KILRFQKD-DPALKALSKADEKMAYLIHLIGDYSLELEEDYFQSLVQSIVGQQLSMKAAD 64
Query: 121 SIYTRFVALFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIV 180
SI+ + L + P +L++S +LR G+S +K Y++DL+EK GIL + I
Sbjct: 65 SIWRKLQDLCG---EVTPARILSLSEDELRSAGLSKKKIEYIKDLSEKVLSGILDLDKID 121
Query: 181 EMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGAL 240
M D + + L VKGIG W+ MF+IFSL +PDV V DLG+++ ++ LYGL + P
Sbjct: 122 SMADEEVIEALVRVKGIGRWTAEMFLIFSLGRPDVFSVADLGLQRAVKWLYGLSDWPDKK 181
Query: 241 KMEEVCEKWKPYRSVGSWYMW 261
+ E ++WKPYR+ S Y+W
Sbjct: 182 FLIECSQRWKPYRTAASLYLW 202
>gi|386010361|ref|YP_005928638.1| DNA-3-methyladenine glycosylase II [Pseudomonas putida BIRD-1]
gi|313497067|gb|ADR58433.1| DNA-3-methyladenine glycosylase II [Pseudomonas putida BIRD-1]
Length = 208
Score = 139 bits (351), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 73/213 (34%), Positives = 125/213 (58%), Gaps = 12/213 (5%)
Query: 53 SDNSPKIFKPLTFKGEVDIALRHLRDKDPLLATLIDAHRPPTFESS--RSPFLSLAKSIL 110
+D SP+ ++ A +HL DP + I A P +++ R P+ +L ++I
Sbjct: 4 ADLSPEAYRE---------AAQHLAALDPDWSRHIAAIGPCLHQATPGREPYEALVRAIA 54
Query: 111 YQQLAYKAAKSIYTRFVALFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYT 170
YQQL +AA++I R +ALF +D P+ +LAV+P+ LR G S K ++ +A+
Sbjct: 55 YQQLHARAAEAILGRLLALFPADDFPQPEQLLAVTPETLRACGFSASKLVTVQGIAQATL 114
Query: 171 DGIL-SDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQV 229
+G++ + E + M D + + L +++G+G W+V M +I+SL + D+LPV D GVR+G +
Sbjct: 115 EGLVPTREQALNMADEALIERLVALRGVGRWTVEMLLIYSLGRSDILPVDDFGVREGYRR 174
Query: 230 LYGLKELPGALKMEEVCEKWKPYRSVGSWYMWR 262
L GL+ P +M + W+P+R+V +WY+WR
Sbjct: 175 LKGLETAPTPAQMRSLGGAWRPFRTVAAWYLWR 207
>gi|448365297|ref|ZP_21553775.1| HhH-GPD family protein [Natrialba aegyptia DSM 13077]
gi|445655819|gb|ELZ08663.1| HhH-GPD family protein [Natrialba aegyptia DSM 13077]
Length = 209
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 69/189 (36%), Positives = 109/189 (57%), Gaps = 3/189 (1%)
Query: 79 KDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNILP 138
+DP++ LI+ H P E + + L SI+ QQL+ +A ++ R F GE + P
Sbjct: 11 RDPVMNRLIETH-DPYVEPDWTEYERLCISIINQQLSTASAAAVRERVFDHFGGE--LTP 67
Query: 139 DAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIG 198
+AVLA + LR+ G+S K SYL++ A + + + E + E + + LT + GIG
Sbjct: 68 EAVLAAEEEPLRDAGLSRSKVSYLQNAARAFQENDYTREGLAEFSNAAVVDQLTEITGIG 127
Query: 199 AWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSW 258
AW+ M+++F L +PD+LP+GDL VR+G+ LYG +M E+ E W+PYRS +
Sbjct: 128 AWTARMYLLFVLERPDILPLGDLAVRRGIDELYGDGAELTRAEMREIAEAWRPYRSAATR 187
Query: 259 YMWRLMEAK 267
Y+W EA+
Sbjct: 188 YIWAEYEAE 196
>gi|108804056|ref|YP_643993.1| DNA-3-methyladenine glycosylase II, partial [Rubrobacter
xylanophilus DSM 9941]
gi|108765299|gb|ABG04181.1| DNA-3-methyladenine glycosylase II [Rubrobacter xylanophilus DSM
9941]
Length = 163
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 68/160 (42%), Positives = 98/160 (61%), Gaps = 1/160 (0%)
Query: 107 KSILYQQLAYKAAKSIYTRFVALFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLA 166
++++ QQL+ AA+SIY R A F G LP + AV ++LR GVS KA LR+LA
Sbjct: 2 RTVVGQQLSVGAARSIYARLCARFGGRPP-LPGELEAVPDEELRACGVSGAKARCLRELA 60
Query: 167 EKYTDGILSDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKG 226
+ +G L E + + D + LT+V+GIG WS MF+IF L +PDVLP DLG+R+
Sbjct: 61 RRVLEGGLPLEELRGLPDGEVISALTAVRGIGRWSAQMFLIFHLRRPDVLPAADLGIRRA 120
Query: 227 LQVLYGLKELPGALKMEEVCEKWKPYRSVGSWYMWRLMEA 266
+LYGL ELP +E + W+P+R+ Y+WR ++A
Sbjct: 121 AALLYGLPELPAEELLERLAAPWRPWRTTACLYLWRSLDA 160
>gi|448299292|ref|ZP_21489304.1| HhH-GPD family protein [Natronorubrum tibetense GA33]
gi|445587882|gb|ELY42131.1| HhH-GPD family protein [Natronorubrum tibetense GA33]
Length = 197
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 70/185 (37%), Positives = 113/185 (61%), Gaps = 6/185 (3%)
Query: 79 KDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNILP 138
+DP++A L++ H P E + S F L SI+ QQL+ +A ++ RF L +G + P
Sbjct: 11 QDPVMAELVERH-DPYVEPNWSEFERLCISIINQQLSTASATAVRERFFELLDG--RVTP 67
Query: 139 DAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIG 198
+ VLA LR G+S +K Y+R+ A + +G + E + + + + +LT +KGIG
Sbjct: 68 ETVLAAEDDALRSAGLSRQKIEYVRNAARAFQEGDYTREGLADHSNDDVIDLLTEIKGIG 127
Query: 199 AWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGL--KELPGALKMEEVCEKWKPYRSVG 256
W+ M+++F L +PDVLP+GDL VR+G++ LYG +EL +M E+ E W+PYRSV
Sbjct: 128 DWTARMYLLFVLERPDVLPLGDLAVRRGIEQLYGNGDEELTRP-EMREIAEAWRPYRSVA 186
Query: 257 SWYMW 261
+ ++W
Sbjct: 187 TRFIW 191
>gi|448431227|ref|ZP_21584998.1| HhH-GPD family protein [Halorubrum tebenquichense DSM 14210]
gi|445688163|gb|ELZ40430.1| HhH-GPD family protein [Halorubrum tebenquichense DSM 14210]
Length = 201
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 68/185 (36%), Positives = 106/185 (57%), Gaps = 4/185 (2%)
Query: 79 KDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNILP 138
+DP +A L+D H P + F L SI+ QQL+ +A +I+ RFV + GE P
Sbjct: 14 EDPTMAALVDRHGPLDVTPADDEFARLCTSIVNQQLSTASAAAIHERFVDVLGGEPT--P 71
Query: 139 DAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDG--ILSDESIVEMDDVTMFKMLTSVKG 196
+ VLA +LRE G+S K YLR++A + D + E + D + LT ++G
Sbjct: 72 EGVLAADEAELREAGLSGTKVEYLRNVAAAFRDDERAFTHEGVAGESDAAVVDRLTEIRG 131
Query: 197 IGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVG 256
+G W+ M++IF+L + DVLP+GDL VRKG++ ++ +M ++ E W+PYRS G
Sbjct: 132 VGEWTARMYLIFALGREDVLPLGDLAVRKGIERVHNDGGDLSRAEMRDIAEAWRPYRSYG 191
Query: 257 SWYMW 261
+ Y+W
Sbjct: 192 TRYVW 196
>gi|433638313|ref|YP_007284073.1| HhH-GPD superfamily base excision DNA repair protein [Halovivax
ruber XH-70]
gi|433290117|gb|AGB15940.1| HhH-GPD superfamily base excision DNA repair protein [Halovivax
ruber XH-70]
Length = 198
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 71/186 (38%), Positives = 109/186 (58%), Gaps = 3/186 (1%)
Query: 80 DPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNILPD 139
DP++A L++ + P T E+ R F L SI+ QQL+ +A +I R + + D I PD
Sbjct: 13 DPVMAELVETYDPYT-ETERDEFERLCVSIINQQLSTASANAIRGRVYEVLD--DEITPD 69
Query: 140 AVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIGA 199
VL+ + Q L + G+S K YLR+ A + + L+ + + + + LT +KGIG
Sbjct: 70 RVLSTADQPLLDAGLSGTKVEYLRNAARAFDETDLTRSGLADHSNDEVVDRLTEIKGIGE 129
Query: 200 WSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSWY 259
W+ M+++F L +PDVLP+GDL +R G+Q LYG E +M V + W+PYRSVG+ Y
Sbjct: 130 WTAEMYLLFVLERPDVLPLGDLAIRNGIQQLYGDGEEMTRAEMRTVADPWRPYRSVGTRY 189
Query: 260 MWRLME 265
+W E
Sbjct: 190 IWAAYE 195
>gi|302913163|ref|XP_003050858.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256731796|gb|EEU45145.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 360
Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 83/213 (38%), Positives = 115/213 (53%), Gaps = 19/213 (8%)
Query: 72 ALRHLRDKDPLLATLIDAHR-----PPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRF 126
A HL D + LID H P PF SL+ I+ QQ++ AAKSI +F
Sbjct: 141 ACDHLIKVDGRMKPLIDNHHCRVFSPEGLAEEIDPFESLSSGIISQQVSGAAAKSIKAKF 200
Query: 127 VALFNGEDNI---LPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMD 183
+ALF + + LP V A S ++LR G+S RKA Y++ LAEK+ G LS + +
Sbjct: 201 IALFEEQPDSRFPLPSQVAAKSIEELRTAGLSQRKAEYIKGLAEKFASGELSARMLHDAS 260
Query: 184 DVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYG-----LKELPG 238
D + + L +V+G+G WSV MF F L + DV +GDLGV++G+ G LK G
Sbjct: 261 DEEVMEKLIAVRGLGKWSVEMFACFGLKRMDVFSLGDLGVQRGMAAFVGRDVAKLKSKGG 320
Query: 239 ALK------MEEVCEKWKPYRSVGSWYMWRLME 265
K M E+ +K+ PYRS+ WYMWR+ E
Sbjct: 321 KWKYMSEQDMVELSDKFAPYRSLFMWYMWRVEE 353
>gi|167042982|gb|ABZ07695.1| putative HhH-GPD superfamily base excision DNA repair protein
[uncultured marine microorganism HF4000_ANIW137P11]
Length = 209
Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 70/194 (36%), Positives = 116/194 (59%), Gaps = 4/194 (2%)
Query: 72 ALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFN 131
A R L DP LA +I+A S F +L K+I+ QQ++ KAA +++ R V L
Sbjct: 14 AKRRLCLIDPALAAVINAKGELGLSSRGDLFATLVKAIVGQQISIKAAATVWGRVVDLIG 73
Query: 132 GEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKML 191
+ P++VLA + ++LR G+S RKA Y+ +AE + G ++ MDD ++L
Sbjct: 74 ---EVKPESVLAHTHEELRSCGLSNRKAEYVAGIAEAWQGG-YAEYDWDSMDDERALELL 129
Query: 192 TSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKP 251
+++G+G W+ M +IF+L +PDV P+ DLGV +G++ +Y E+ ++ ++ W P
Sbjct: 130 VALRGVGRWTAEMVLIFTLLRPDVFPIDDLGVVRGMEKVYNEGEVLDKAELNDIASNWSP 189
Query: 252 YRSVGSWYMWRLME 265
+R+VGSWYMWR ++
Sbjct: 190 WRTVGSWYMWRAID 203
>gi|395447125|ref|YP_006387378.1| DNA-3-methyladenine glycosylase II [Pseudomonas putida ND6]
gi|421524643|ref|ZP_15971264.1| DNA-3-methyladenine glycosylase II [Pseudomonas putida LS46]
gi|388561122|gb|AFK70263.1| DNA-3-methyladenine glycosylase II [Pseudomonas putida ND6]
gi|402751106|gb|EJX11619.1| DNA-3-methyladenine glycosylase II [Pseudomonas putida LS46]
Length = 208
Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 70/194 (36%), Positives = 118/194 (60%), Gaps = 3/194 (1%)
Query: 72 ALRHLRDKDPLLATLIDAHRPPTFESS--RSPFLSLAKSILYQQLAYKAAKSIYTRFVAL 129
A +HL DP + I A P +++ R P+ +L ++I YQQL +AA++I R +AL
Sbjct: 14 ATQHLAALDPDWSRHIAAIGPCLHQATPGREPYEALVRAIAYQQLHARAAEAILGRLLAL 73
Query: 130 FNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGIL-SDESIVEMDDVTMF 188
F +D P+ +LAV+P+ LR G S K ++ +A+ +G++ + E + M D +
Sbjct: 74 FPADDFPQPEQLLAVTPETLRACGFSASKLVTVQGIAQATLEGLVPTREQALTMADEALI 133
Query: 189 KMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEK 248
+ L +++G+G W+V M +I+SL + D+LPV D GVR+G + L GL+ P +M +
Sbjct: 134 ERLVALRGVGRWTVEMLLIYSLGRSDILPVDDFGVREGYRRLKGLETAPTPAQMRSLGGA 193
Query: 249 WKPYRSVGSWYMWR 262
W+P+R+V +WY+WR
Sbjct: 194 WRPFRTVAAWYLWR 207
>gi|325277112|ref|ZP_08142761.1| DNA-3-methyladenine glycosylase II [Pseudomonas sp. TJI-51]
gi|324097754|gb|EGB95951.1| DNA-3-methyladenine glycosylase II [Pseudomonas sp. TJI-51]
Length = 208
Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 76/213 (35%), Positives = 123/213 (57%), Gaps = 12/213 (5%)
Query: 53 SDNSPKIFKPLTFKGEVDIALRHLRDKDPLLATLIDAHRPPTFESS--RSPFLSLAKSIL 110
+D SP ++ GE AL DP A + A P +++ R P+ +L ++I
Sbjct: 4 ADLSPAAYRQ---AGEYLAAL------DPDWARHVAATGPCLHQATPGREPYEALVRAIA 54
Query: 111 YQQLAYKAAKSIYTRFVALFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYT 170
YQQL +AA++I R +ALF P+ +LA SPQ LR G S K + ++ +A+
Sbjct: 55 YQQLHARAAEAILGRLLALFPQHAFPPPEQLLAASPQTLRACGFSASKLATIQGIAQARL 114
Query: 171 DGIL-SDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQV 229
DG++ + E+ + M D + + L +++G+G W+V M +I+SL + D+LPV D GVR+G +
Sbjct: 115 DGLVPTREAALAMSDDALIERLVALRGVGRWTVEMLLIYSLERSDILPVDDFGVREGYRR 174
Query: 230 LYGLKELPGALKMEEVCEKWKPYRSVGSWYMWR 262
L GL + P +M + W+PYR+V +WY+WR
Sbjct: 175 LKGLDKAPTPAQMRSLGGAWRPYRTVAAWYLWR 207
>gi|390956209|ref|YP_006419966.1| 3-methyladenine DNA glycosylase [Terriglobus roseus DSM 18391]
gi|390411127|gb|AFL86631.1| 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase
[Terriglobus roseus DSM 18391]
Length = 238
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 88/214 (41%), Positives = 115/214 (53%), Gaps = 16/214 (7%)
Query: 68 EVDIALRHLRDKDPLLATLIDAHRPPTFE--SSRSPFLSLAKSILYQQLAYKAAKSIYTR 125
+ + A+ L DP LA LI+ P S SPF SLA+SI+YQQL KAA +I+ R
Sbjct: 13 DAEEAIAALSAADPKLARLIERAGPLRLRISGSLSPFESLAESIIYQQLHGKAAAAIHQR 72
Query: 126 FVALFNGEDNI----LPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGIL-SDESIV 180
+ F I P +L QLR G+S K LRDLA K DG + S I
Sbjct: 73 MIEGFAEVAGIGEHPSPQHLLDCPTAQLRAAGLSANKTLALRDLAAKTIDGTVPSLPKIR 132
Query: 181 EMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYG-LK----- 234
M D + + LT V+GIG W+V M +IF L +PDV P D GVRKG + +G LK
Sbjct: 133 RMTDEAIIEHLTQVRGIGRWTVEMMLIFRLGRPDVFPTSDYGVRKGFALTFGKLKPTDKV 192
Query: 235 ---ELPGALKMEEVCEKWKPYRSVGSWYMWRLME 265
+LP +ME+ +KW P+ SV SWY+WR +
Sbjct: 193 APGDLPKPAEMEKRAKKWHPWCSVASWYLWRACD 226
>gi|424922741|ref|ZP_18346102.1| 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase
[Pseudomonas fluorescens R124]
gi|404303901|gb|EJZ57863.1| 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase
[Pseudomonas fluorescens R124]
Length = 205
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 75/196 (38%), Positives = 114/196 (58%), Gaps = 12/196 (6%)
Query: 74 RHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGE 133
RH+ P L H+P +R P+ SL ++I YQQL KA +I R VALF G+
Sbjct: 21 RHIAAIGPCL------HQP---HPTRDPYESLVRAIAYQQLHAKAGDAIVGRLVALFPGQ 71
Query: 134 DNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSD-ESIVEMDDVTMFKMLT 192
P+ +LA QLR G S K + ++ +A+ DG++ D + + MDD + + L
Sbjct: 72 TFPRPEQILATDFDQLRGCGFSAGKIATIQGIAQATLDGVVPDYPTALAMDDEALIERLV 131
Query: 193 SVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPY 252
+++G+G W+V M +I+SL + D+LP D GVR+G + L GL+ P +M E+ W PY
Sbjct: 132 NLRGVGRWTVEMLLIYSLERMDILPADDFGVREGYRRLKGLEVQPTRKQMIEIGSAWSPY 191
Query: 253 RSVGSWYMWRLMEAKG 268
R+V +WY+WR+ AKG
Sbjct: 192 RTVAAWYLWRV--AKG 205
>gi|359799492|ref|ZP_09302053.1| DNA-3-methyladenine glycosylase [Achromobacter arsenitoxydans SY8]
gi|359362596|gb|EHK64332.1| DNA-3-methyladenine glycosylase [Achromobacter arsenitoxydans SY8]
Length = 214
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 73/197 (37%), Positives = 119/197 (60%), Gaps = 4/197 (2%)
Query: 70 DIALRHLRDKDPLLATLIDAHRPPTFESSR-SPFLSLAKSILYQQLAYKAAKSIYTRFVA 128
+ A+ HL +D +L +I H P + +SR +PF++LA++I+ QQ++ KAA + +T+F+
Sbjct: 15 EAAVAHLMRRDRILKKIIPQH-PEVWLTSRGTPFVTLARAIIGQQISTKAADAAWTKFID 73
Query: 129 LFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMF 188
P AVL V + LR+ G+S RKA Y++DLA + + + E MDD +
Sbjct: 74 AVGKRPT--PVAVLRVGVEGLRKAGLSQRKAEYVQDLAVHFGERRVHPEKWAAMDDEAVI 131
Query: 189 KMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEK 248
L +++GIG W+ MF+IF+L +PDVLP+ D G+ K + + Y E + EV
Sbjct: 132 SELIAIRGIGRWTAEMFLIFNLQRPDVLPLDDPGLLKAISLHYFSGEPVSRFEAREVSLA 191
Query: 249 WKPYRSVGSWYMWRLME 265
W+P+R+V +WY+WR +E
Sbjct: 192 WQPWRTVATWYLWRSLE 208
>gi|346970090|gb|EGY13542.1| DNA-3-methyladenine glycosylase [Verticillium dahliae VdLs.17]
Length = 405
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 84/227 (37%), Positives = 117/227 (51%), Gaps = 22/227 (9%)
Query: 61 KPLTFKGEVDIALRHLRDKDPLLATLIDAH-----RPPTFESSRSPFLSLAKSILYQQLA 115
+P T + + A HL DP + LID H P PF SL I+ QQ++
Sbjct: 147 QPTTTENILAEACAHLIRVDPRMKALIDKHPCKVFSPEGLAEKIDPFESLCSGIISQQVS 206
Query: 116 YKAAKSIYTRFVALFNGEDNI-----LPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYT 170
AAKSI +FVALF D + P V A S + LR G+S RKA Y++ +AEK+
Sbjct: 207 GAAAKSIKAKFVALFTASDLVDGRFPHPSQVAAQSVEHLRTAGLSQRKAEYVKGIAEKFA 266
Query: 171 DGILSDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVL 230
G LS E + + + L +++G+G WSV MF F+L + DV +GDLGV++G+
Sbjct: 267 SGELSAEMLAGAPYAEVLEKLIAIRGLGQWSVEMFACFALKRMDVFSLGDLGVQRGMAAF 326
Query: 231 YG-----LKELPGA-------LKMEEVCEKWKPYRSVGSWYMWRLME 265
G LK G M ++ +K+ PYRSV WYMWR+ E
Sbjct: 327 EGRDVAKLKAKGGGKWKYMSEKDMIDMSDKFAPYRSVFMWYMWRVEE 373
>gi|389628844|ref|XP_003712075.1| DNA-3-methyladenine glycosylase [Magnaporthe oryzae 70-15]
gi|351644407|gb|EHA52268.1| DNA-3-methyladenine glycosylase [Magnaporthe oryzae 70-15]
Length = 385
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 88/250 (35%), Positives = 127/250 (50%), Gaps = 21/250 (8%)
Query: 37 ITKIAEIPVATAISTNSDNSPKIFKPLTFKGEVDIALRHLRDKDPLLATLIDAHR----- 91
+ + +P T S+ S I P T ++ A HL DP + LI+AH
Sbjct: 129 VVAASHLPAQTTSSSPSKAGIPIKGPTTTATLLEEACAHLIRVDPRMKPLIEAHHCHIFS 188
Query: 92 PPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFN----GEDNILPDAVLAVSPQ 147
P PF SL I+ QQ++ AA+SI +FVALF GE P +V A + +
Sbjct: 189 PEGLAEKIDPFESLCSGIISQQVSGAAARSIKAKFVALFADEKPGELFPSPSSVAAATIE 248
Query: 148 QLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMI 207
+LR G+S RKA Y++ LAEK+ G LS + ++ + + L +V+G+G WSV MF
Sbjct: 249 KLRTAGLSQRKAEYVKGLAEKFASGELSAQLFADLPYEQVLQKLIAVRGLGRWSVEMFAC 308
Query: 208 FSLHKPDVLPVGDLGVRKGLQVLYGL------KELPGALK------MEEVCEKWKPYRSV 255
F L DV +GDLGV++G+ G G K M E+ +++KPYRS+
Sbjct: 309 FGLKFMDVFSLGDLGVQRGMAAFSGRDVAKMKNSKAGKWKYMNEKDMTELSDRFKPYRSL 368
Query: 256 GSWYMWRLME 265
WYMWR+ E
Sbjct: 369 FMWYMWRVEE 378
>gi|449301040|gb|EMC97051.1| hypothetical protein BAUCODRAFT_121565 [Baudoinia compniacensis
UAMH 10762]
Length = 297
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 94/275 (34%), Positives = 135/275 (49%), Gaps = 33/275 (12%)
Query: 9 DNISQNPSASSKITFPPRKIRKLTTITPITKIAEIPVATAISTNSDNSPKIFKPLTFKGE 68
DN P ++ PR + + + + P A++++T +
Sbjct: 24 DNRPAEPHTTNATLVTPRGTQVQPNYSNFEESSSQPAASSLTTA-------------RSL 70
Query: 69 VDIALRHLRDKDPLLATLIDAHR-----PPTFESSRSPFLSLAKSILYQQLAYKAAKSIY 123
+D A+ HL D L +ID H P S PF SLA I+ QQ++ AAKSI
Sbjct: 71 LDEAVAHLLAVDSGLGPVIDQHHCHVFSPSGLAESIDPFRSLASGIMAQQVSGAAAKSIK 130
Query: 124 TRFVALFNGED--NILPDAVLAVSPQ--QLREIGVSYRKASYLRDLAEKYTDGILSDESI 179
+FVALF E + P L +LRE G+S RKA Y++ LA K+T+G L+ +
Sbjct: 131 NKFVALFPPESCPSGFPSPALVAETGIPRLREAGLSQRKAEYIQGLAAKFTNGELTIPML 190
Query: 180 VEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYG-----LK 234
+ D + + L +V+G+G WSV MFM F L + DV GDLGV++G+ G LK
Sbjct: 191 MNGSDEEVMEKLVAVRGLGIWSVEMFMCFGLKRMDVFSTGDLGVQRGMAAYKGRDVAKLK 250
Query: 235 ELPGALK------MEEVCEKWKPYRSVGSWYMWRL 263
G K M EV E ++PYRS+ WYMWR+
Sbjct: 251 AKGGKWKYMSEKEMLEVAEPFRPYRSLFMWYMWRI 285
>gi|398876736|ref|ZP_10631889.1| 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase
[Pseudomonas sp. GM67]
gi|398203884|gb|EJM90697.1| 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase
[Pseudomonas sp. GM67]
Length = 205
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 75/210 (35%), Positives = 119/210 (56%), Gaps = 12/210 (5%)
Query: 57 PKIFKPLT-FKGEVDIAL-RHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQL 114
P ++P T F +D RH+ P L H+P ++R P+ SL ++I YQQL
Sbjct: 2 PDPYQPATRFLASIDDDWARHIATIGPCL------HQP---HAARDPYESLVRAIAYQQL 52
Query: 115 AYKAAKSIYTRFVALFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGIL 174
+A +I R +ALF P+ +L QLR G S K + ++ +A+ DG++
Sbjct: 53 HARAGDAIVGRLLALFPSASFPRPEQILGSGFDQLRSCGFSAGKIATIQGIAQAALDGVV 112
Query: 175 SD-ESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGL 233
D + + MDD + + L +++G+G W+V M +I+SL +PD+LP D GVR+G + L GL
Sbjct: 113 PDYATALAMDDEALIEQLITLRGVGRWTVEMLLIYSLERPDILPADDFGVREGYRRLKGL 172
Query: 234 KELPGALKMEEVCEKWKPYRSVGSWYMWRL 263
+ P +M E+ +W PYR+V SWY+WR+
Sbjct: 173 EVQPTRKQMVEIGLEWSPYRTVASWYLWRV 202
>gi|253687190|ref|YP_003016380.1| DNA-3-methyladenine glycosylase II [Pectobacterium carotovorum
subsp. carotovorum PC1]
gi|251753768|gb|ACT11844.1| DNA-3-methyladenine glycosylase II [Pectobacterium carotovorum
subsp. carotovorum PC1]
Length = 220
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 66/170 (38%), Positives = 109/170 (64%), Gaps = 6/170 (3%)
Query: 99 RSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNILP--DAVLAVSPQQLREIGVSY 156
R P+ +L +++ YQQL +A ++ + L D++ P + +LA S LR+ G S
Sbjct: 42 REPYEALMRAVAYQQLTTRAGDAMVAK---LLRVHDDVFPSPEQMLACSTDTLRQCGFSA 98
Query: 157 RKASYLRDLAEKYTDGIL-SDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDV 215
RKA L +A+ G++ S E EMDD T+ + LTS+KGIG W+V MF+I+SL + D+
Sbjct: 99 RKADTLHGIAQGALSGLVPSLERAAEMDDDTLIQQLTSLKGIGRWTVEMFLIYSLERTDI 158
Query: 216 LPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSWYMWRLME 265
+P+ DLG+R+GL+ +Y L+++P ++ + + +PYR+V SWY+WR +E
Sbjct: 159 MPLDDLGIRQGLRYVYDLQDMPKPRDLQALSLQCQPYRTVASWYLWRSLE 208
>gi|398902915|ref|ZP_10651346.1| HhH-GPD superfamily base excision DNA repair protein [Pseudomonas
sp. GM50]
gi|398177816|gb|EJM65481.1| HhH-GPD superfamily base excision DNA repair protein [Pseudomonas
sp. GM50]
Length = 205
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 70/191 (36%), Positives = 113/191 (59%), Gaps = 10/191 (5%)
Query: 74 RHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGE 133
RH+ P L H+P ++R P+ SL ++I YQQL KA +I R +ALF
Sbjct: 21 RHINAIGPCL------HQP---HAARDPYESLVRAIAYQQLHAKAGDAIVGRLLALFPSI 71
Query: 134 DNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSD-ESIVEMDDVTMFKMLT 192
P+ +LA +Q+R G S K + ++ +A+ DG++ D + + MDD + + L
Sbjct: 72 TFPRPEQILATDFEQMRGCGFSASKIATIQGIAQAALDGVVPDYATALAMDDEALIERLI 131
Query: 193 SVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPY 252
+++G+G W+V M +I+SL +PD+LP D GVR+G + L GL+ P +M E+ W+PY
Sbjct: 132 TLRGVGRWTVEMLLIYSLERPDILPADDFGVREGYRRLKGLEVQPTRKQMIEIGLAWRPY 191
Query: 253 RSVGSWYMWRL 263
R+V +WY+WR+
Sbjct: 192 RTVAAWYLWRV 202
>gi|398966780|ref|ZP_10681652.1| 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase
[Pseudomonas sp. GM30]
gi|398145452|gb|EJM34235.1| 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase
[Pseudomonas sp. GM30]
Length = 209
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 73/191 (38%), Positives = 111/191 (58%), Gaps = 10/191 (5%)
Query: 74 RHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGE 133
RH+ P L H+P +R P+ SL ++I YQQL +A +I R VALF G+
Sbjct: 21 RHVAAVGPCL------HQP---HPARDPYESLVRAIAYQQLHARAGDAIVGRLVALFPGQ 71
Query: 134 DNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSD-ESIVEMDDVTMFKMLT 192
P+ VLA QLR G S K + ++ +A+ DG++ D + + MDD + + L
Sbjct: 72 TFPRPEQVLATDFDQLRGCGFSAGKIATIQGIAQATLDGVVPDYPTALAMDDEALIERLV 131
Query: 193 SVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPY 252
S++G+G W+V M +I+SL + D+LP D GVR+G + L GL+ P +M E+ W PY
Sbjct: 132 SLRGVGRWTVEMLLIYSLERMDILPADDFGVREGYRRLKGLEVQPTRRQMIEIGLAWSPY 191
Query: 253 RSVGSWYMWRL 263
R+V +WY+WR+
Sbjct: 192 RTVAAWYLWRV 202
>gi|340515358|gb|EGR45613.1| predicted protein [Trichoderma reesei QM6a]
Length = 353
Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 82/214 (38%), Positives = 117/214 (54%), Gaps = 20/214 (9%)
Query: 72 ALRHLRDKDPLLATLIDAHRPPTFESSR-----SPFLSLAKSILYQQLAYKAAKSIYTRF 126
A HL D + LI+ H F + PF SL SI+ QQ++ AAKSI +F
Sbjct: 133 ACDHLIKVDERMRPLIEKHHCHVFSAEGLAEKIDPFESLVSSIISQQVSGAAAKSIKNKF 192
Query: 127 VALF--NGEDNILP--DAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEM 182
+ LF G+ I P V A S ++LR G+S RKA Y++ LAEK+ G ++ + + +
Sbjct: 193 IGLFFPEGQTRIFPTPSEVAACSIERLRTAGLSQRKAEYVQGLAEKFASGEITAQMLHDA 252
Query: 183 DDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYG-----LKELP 237
D + + L +V+G+G WSV MF F+L + DV +GDLGV++G+ G LK
Sbjct: 253 PDEELMERLIAVRGLGKWSVEMFACFALKRMDVFSLGDLGVQRGMAAFVGRDVAKLKNKG 312
Query: 238 GALK------MEEVCEKWKPYRSVGSWYMWRLME 265
G K M E+ +K+ PYRSV WYMWR+ E
Sbjct: 313 GKWKYMSEQDMVELSDKFSPYRSVFMWYMWRVEE 346
>gi|339484860|ref|YP_004696646.1| HhH-GPD family protein [Nitrosomonas sp. Is79A3]
gi|338807005|gb|AEJ03247.1| HhH-GPD family protein [Nitrosomonas sp. Is79A3]
Length = 231
Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 69/194 (35%), Positives = 115/194 (59%), Gaps = 3/194 (1%)
Query: 72 ALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFN 131
A++ L D ++ LI T S F +LA+SI+ QQ++ KAA+S++ + +
Sbjct: 35 AIQELAACDKVMHQLIRQFEDATLTSRGCAFTTLARSIVGQQISVKAAESVWQKVI---R 91
Query: 132 GEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKML 191
++ P + AV LR G+S RK +YL+DL+ + + L++ +EMDD + + L
Sbjct: 92 AIPDMTPHTIAAVEQDLLRACGLSARKITYLQDLSRHFIEESLNETIWIEMDDEAIIQQL 151
Query: 192 TSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKP 251
T VKGIG W+ MF+IF L +PDVLP+ D+G+++ + Y K+ M E+ + W+P
Sbjct: 152 TEVKGIGRWTAEMFLIFHLQRPDVLPLDDIGLQRAISQHYYDKQPVDKKTMLELAKPWQP 211
Query: 252 YRSVGSWYMWRLME 265
+RSV +WY+WR ++
Sbjct: 212 WRSVATWYLWRSLD 225
>gi|339485636|ref|YP_004700164.1| DNA-3-methyladenine glycosylase II [Pseudomonas putida S16]
gi|338836479|gb|AEJ11284.1| DNA-3-methyladenine glycosylase II [Pseudomonas putida S16]
Length = 208
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 75/213 (35%), Positives = 123/213 (57%), Gaps = 12/213 (5%)
Query: 53 SDNSPKIFKPLTFKGEVDIALRHLRDKDPLLATLIDAHRPPTFESS--RSPFLSLAKSIL 110
SD SP+ ++ T +L DP + I+A P +++ R P+ L ++I
Sbjct: 4 SDLSPEAYREAT---------EYLAALDPDWSRHIEATGPCLHQATPGREPYEVLVRAIA 54
Query: 111 YQQLAYKAAKSIYTRFVALFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYT 170
YQQL +AA++I R +ALF P+ +LAV+P+ +R G S K + ++ +A+
Sbjct: 55 YQQLHARAAEAILGRLLALFPEAAFPGPEQLLAVTPETMRACGFSASKMATIQGIAQGRL 114
Query: 171 DGIL-SDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQV 229
DG++ S E + M D + + L +++G+G W+V M +I+SL + DVLPV D GVR+G +
Sbjct: 115 DGLVPSREEALAMADEALIERLVALRGVGRWTVEMLLIYSLARSDVLPVDDFGVREGYRR 174
Query: 230 LYGLKELPGALKMEEVCEKWKPYRSVGSWYMWR 262
L GL + P +M + W+PYR+V +WY+WR
Sbjct: 175 LKGLDKAPTPAQMRSLGGGWRPYRTVAAWYLWR 207
>gi|302846811|ref|XP_002954941.1| hypothetical protein VOLCADRAFT_118912 [Volvox carteri f.
nagariensis]
gi|300259704|gb|EFJ43929.1| hypothetical protein VOLCADRAFT_118912 [Volvox carteri f.
nagariensis]
Length = 365
Score = 138 bits (347), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 75/194 (38%), Positives = 115/194 (59%), Gaps = 9/194 (4%)
Query: 68 EVDIALRHLRDKDPLLATLIDAHRPPTFESSR------SPFLSLAKSILYQQLAYKAAKS 121
++++A+ HLR +DP + + P R S F +LA+S++YQQLA KAA +
Sbjct: 172 DLELAVAHLRARDPRSSRGGSSGGPWDCGDGRGGGASHSLFAALARSVVYQQLATKAASA 231
Query: 122 IYTRFVALFNGE--DNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESI 179
I+ R +A+ D + P VL+ +QLR G+S RK YL +AE + +E +
Sbjct: 232 IWGRVLAVCKATSGDLLTPGQVLSTPAEQLRAAGLSGRKLEYLTGMAEAFATREGWEERL 291
Query: 180 VEMDDV-TMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPG 238
D+ + LTS++G+G+W+VHM +F L PDVLP GDLGVR+GLQ L+ L +LP
Sbjct: 292 AATHDLDQLVSELTSLRGVGSWTVHMLAMFHLGLPDVLPCGDLGVRRGLQQLHKLPKLPQ 351
Query: 239 ALKMEEVCEKWKPY 252
++E++ E W+PY
Sbjct: 352 PKQVEDLTEAWRPY 365
>gi|448311153|ref|ZP_21500926.1| HhH-GPD family protein [Natronolimnobius innermongolicus JCM 12255]
gi|445606037|gb|ELY59947.1| HhH-GPD family protein [Natronolimnobius innermongolicus JCM 12255]
Length = 197
Score = 138 bits (347), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 72/188 (38%), Positives = 113/188 (60%), Gaps = 7/188 (3%)
Query: 76 LRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDN 135
LRD DP++A L++ H P E + F L SI+ QQL+ +A ++ RF L D+
Sbjct: 9 LRD-DPVMAELVEKH-DPYVEPNWDEFERLCISIINQQLSTASAAAVRERFFELLR--DD 64
Query: 136 ILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVK 195
+ P+ VL + LR +G+S +K Y+R+ A + + E + + + + LT +K
Sbjct: 65 VTPETVLEAEDEALRSVGLSRQKIEYVRNAARAFQKRDYTREGLADHTNDEVIDALTEIK 124
Query: 196 GIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGL--KELPGALKMEEVCEKWKPYR 253
GIG W+ M+++F L +PDVLP+GDL VR+G++ LYG +EL A +M E+ E W+PYR
Sbjct: 125 GIGEWTARMYLLFVLERPDVLPLGDLAVRRGIEQLYGNGDEELTRA-QMREIAEAWRPYR 183
Query: 254 SVGSWYMW 261
SV + Y+W
Sbjct: 184 SVATRYIW 191
>gi|407364586|ref|ZP_11111118.1| DNA-3-methyladenine glycosylase II [Pseudomonas mandelii JR-1]
Length = 205
Score = 138 bits (347), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 71/191 (37%), Positives = 110/191 (57%), Gaps = 10/191 (5%)
Query: 74 RHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGE 133
RH+ P L H P ++R P+ SL ++I YQQL KA +I R +ALF
Sbjct: 21 RHIAAVGPCL------HEP---HAARDPYESLVRAIAYQQLHAKAGDAIIGRLLALFPAT 71
Query: 134 DNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSD-ESIVEMDDVTMFKMLT 192
P+ +LA LR G S K + ++ +A+ DG++ D + + MDD + + L
Sbjct: 72 TFPRPEQILATGFDPLRSCGFSAGKIATIQGIAQAALDGVVPDYATALAMDDEALIERLI 131
Query: 193 SVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPY 252
+++G+G W+V M +I+SL +PD+LP D GVR+G + L GL+ P +M E+ W+PY
Sbjct: 132 TLRGVGRWTVEMLLIYSLERPDILPADDFGVREGYRRLKGLEVQPTRKQMVEIGLAWRPY 191
Query: 253 RSVGSWYMWRL 263
R+V SWY+WR+
Sbjct: 192 RTVASWYLWRM 202
>gi|350632038|gb|EHA20406.1| 3-methyladenine DNA glycosidase [Aspergillus niger ATCC 1015]
Length = 294
Score = 138 bits (347), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 100/274 (36%), Positives = 142/274 (51%), Gaps = 25/274 (9%)
Query: 16 SASSKITFPP--RKIR-KLTTITPITKIAEIPVATAISTNSDNSP-KIFKP---LTFKGE 68
++SS+ T PP R + T T +T VA T++D SP K +P T
Sbjct: 14 TSSSRTTPPPLDRPVEPHHTNATLLTPHGSSLVAYPPGTDADASPSKTGRPRPTATTGTL 73
Query: 69 VDIALRHLRDKDPLLATLIDAHRPPTFESSR-----SPFLSLAKSILYQQLAYKAAKSIY 123
++ A HL DP L +LI P F PF SL SI+ QQ++ AAKSI
Sbjct: 74 LEKAAAHLIATDPRLESLIREQPCPLFTPEGLAEEIDPFRSLVSSIIGQQVSGAAAKSIK 133
Query: 124 TRFVALF--NGEDNI--------LPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGI 173
+FVALF N +D P+ ++ + LR G+S RKA Y+ L+EK+ +G
Sbjct: 134 DKFVALFKTNNKDEDGTRPSFFPTPEEIIKMDISTLRTAGLSQRKAEYIHGLSEKFANGE 193
Query: 174 LSDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYG- 232
LS ++ D + + LT+V+G+G WSV MF F+L + DV GDLGV++G V G
Sbjct: 194 LSARMLLNASDEELVEKLTAVRGLGKWSVEMFACFALKRIDVFSTGDLGVQRGCAVFVGK 253
Query: 233 -LKELPGALKMEEVCEKWKPYRSVGSWYMWRLME 265
K +P M E+ K+ PYRS+ WYMWR+ +
Sbjct: 254 DFKYMPEK-DMLELAAKFAPYRSLFMWYMWRVTD 286
>gi|297565566|ref|YP_003684538.1| HhH-GPD family protein [Meiothermus silvanus DSM 9946]
gi|296850015|gb|ADH63030.1| HhH-GPD family protein [Meiothermus silvanus DSM 9946]
Length = 207
Score = 138 bits (347), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 80/192 (41%), Positives = 113/192 (58%), Gaps = 13/192 (6%)
Query: 80 DPLLATLIDAHRPPTFESS----RSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDN 135
DP L LI+ + P F + R PF +L SI+ QQL+ KAA +I+ R A +
Sbjct: 25 DPRLHPLIERYGPAPFHPNPVGIRPPFRTLVGSIVGQQLSGKAADTIWQRLEARYP---- 80
Query: 136 ILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVK 195
I P A+ +P+ LR +G+S KASY+ DL+ +G L E I D + LT VK
Sbjct: 81 IEPQALYQATPEDLRSLGLSRAKASYIIDLSRFALEGGL--EGIETQPDHEIIAHLTRVK 138
Query: 196 GIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSV 255
GIG WS MF++F L +PDV PV DLG+RKG + LYG+ L E+ E+++PYRS
Sbjct: 139 GIGVWSAQMFLMFGLGRPDVWPVLDLGIRKGAEKLYGVTTKADLL---ELGERFRPYRSH 195
Query: 256 GSWYMWRLMEAK 267
+WY+WR++E +
Sbjct: 196 AAWYLWRVLETQ 207
>gi|227329145|ref|ZP_03833169.1| putative DNA-3-methyladenine glycosylase [Pectobacterium
carotovorum subsp. carotovorum WPP14]
Length = 220
Score = 138 bits (347), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 64/168 (38%), Positives = 109/168 (64%), Gaps = 2/168 (1%)
Query: 99 RSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNILPDAVLAVSPQQLREIGVSYRK 158
R P+ +L +++ YQQL +A ++ + + + +G+ P+ +LA S LR+ G S RK
Sbjct: 42 REPYEALMRAVAYQQLTTRAGDAMVAKLLRV-HGDVFPTPEQILACSTDTLRQCGFSARK 100
Query: 159 ASYLRDLAEKYTDGIL-SDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLP 217
A L +A+ G++ S E E DD T+ + LTS+KGIG W+V MF+I+SL + D++P
Sbjct: 101 ADTLHGIAQGALSGLVPSLEQAAERDDDTLIQQLTSLKGIGRWTVEMFLIYSLERTDIMP 160
Query: 218 VGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSWYMWRLME 265
+ DLG+R+GL+ +Y L+++P ++ + + +PYR+V SWY+WR +E
Sbjct: 161 LDDLGIRQGLRYVYDLQDMPKPRDLQALSLQCQPYRTVASWYLWRALE 208
>gi|171463665|ref|YP_001797778.1| HhH-GPD family protein [Polynucleobacter necessarius subsp.
necessarius STIR1]
gi|171193203|gb|ACB44164.1| HhH-GPD family protein [Polynucleobacter necessarius subsp.
necessarius STIR1]
Length = 223
Score = 138 bits (347), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 67/191 (35%), Positives = 115/191 (60%), Gaps = 2/191 (1%)
Query: 72 ALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFN 131
A + L +D +L LI + + PF +LA++I+ QQ++ AA+S++ + V+
Sbjct: 26 ACKELMKQDRILKKLIPKYGSGFLVTRGDPFNTLARAIVGQQISVAAAQSVWNKVVSAC- 84
Query: 132 GEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKML 191
+ + P +LA+S ++LR G+S RK Y+RDLA+ + G L +MDD ++ K L
Sbjct: 85 -KKKVTPKNILALSSEELRAAGLSGRKVEYIRDLADHFDSGRLHANQWKDMDDESVIKEL 143
Query: 192 TSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKP 251
+S++GIG W+ MF+IF++ +P++LP+ D+G+ K + + Y E + EV W P
Sbjct: 144 SSIRGIGRWTAEMFLIFNMVRPNILPLDDVGLIKAISLNYFSGEPVSRHEAREVAANWAP 203
Query: 252 YRSVGSWYMWR 262
+R+V +WYMWR
Sbjct: 204 WRTVATWYMWR 214
>gi|421484512|ref|ZP_15932080.1| DNA-3-methyladenine glycosylase [Achromobacter piechaudii HLE]
gi|400197007|gb|EJO29975.1| DNA-3-methyladenine glycosylase [Achromobacter piechaudii HLE]
Length = 214
Score = 137 bits (346), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 73/197 (37%), Positives = 118/197 (59%), Gaps = 4/197 (2%)
Query: 70 DIALRHLRDKDPLLATLIDAHRPPTFESSR-SPFLSLAKSILYQQLAYKAAKSIYTRFVA 128
+ A+ HL +D +L +I H P + +SR +PF++LA++I+ QQ++ KAA +++T+F+
Sbjct: 15 EAAVAHLMRRDRILKKVIPQH-PEVWLTSRGTPFVTLARAIIGQQISTKAADAVWTKFID 73
Query: 129 LFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMF 188
P AVL V LR+ G+S RKA Y+ DLA + + + E MDD +
Sbjct: 74 AVGKRPT--PVAVLRVGVDGLRKAGLSQRKAEYVLDLAVHFGERRVHPEKWAAMDDEAVI 131
Query: 189 KMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEK 248
L +++GIG W+ MF+IF+L +PDVLP+ D G+ K + + Y E + EV
Sbjct: 132 SELVAIRGIGRWTAEMFLIFNLQRPDVLPLDDPGLLKAISLHYFSGEPVSRFEAREVSLA 191
Query: 249 WKPYRSVGSWYMWRLME 265
W+P+R+V +WY+WR +E
Sbjct: 192 WQPWRTVATWYLWRSLE 208
>gi|227115208|ref|ZP_03828864.1| putative DNA-3-methyladenine glycosylase [Pectobacterium
carotovorum subsp. brasiliensis PBR1692]
Length = 220
Score = 137 bits (346), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 64/168 (38%), Positives = 109/168 (64%), Gaps = 2/168 (1%)
Query: 99 RSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNILPDAVLAVSPQQLREIGVSYRK 158
R P+ +L +++ YQQL +A ++ + + + +G+ P+ +LA S LR+ G S RK
Sbjct: 42 REPYEALMRAVAYQQLTTRAGDAMVAKLLRV-HGDVFPTPEQILACSTDTLRQCGFSARK 100
Query: 159 ASYLRDLAEKYTDGIL-SDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLP 217
A L +A+ G++ S E E DD T+ + LTS+KGIG W+V MF+I+SL + D++P
Sbjct: 101 ADTLHGIAQGALSGLVPSLEQAAERDDDTLIQQLTSLKGIGRWTVEMFLIYSLERTDIMP 160
Query: 218 VGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSWYMWRLME 265
+ DLG+R+GL+ +Y L+++P +++ + +PYR+V SWY+WR +E
Sbjct: 161 LDDLGIRQGLRYVYDLQDMPKPRELQALSLHCQPYRTVASWYLWRALE 208
>gi|403057253|ref|YP_006645470.1| DNA-3-methyladenine glycosylase [Pectobacterium carotovorum subsp.
carotovorum PCC21]
gi|402804579|gb|AFR02217.1| putative DNA-3-methyladenine glycosylase [Pectobacterium
carotovorum subsp. carotovorum PCC21]
Length = 220
Score = 137 bits (346), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 64/168 (38%), Positives = 108/168 (64%), Gaps = 2/168 (1%)
Query: 99 RSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNILPDAVLAVSPQQLREIGVSYRK 158
R P+ +L +++ YQQL +A ++ + + + +G+ P+ +LA S LR+ G S RK
Sbjct: 42 REPYEALMRAVAYQQLTTRAGDAMVAKLLRI-HGDVFPTPEQILACSTDTLRQCGFSARK 100
Query: 159 ASYLRDLAEKYTDGIL-SDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLP 217
A L +A+ G++ S E E DD T+ + LTS+KGIG W+V MF+I+SL + D++P
Sbjct: 101 ADTLHGIAQGALSGLVPSLEQAAERDDDTLIQQLTSLKGIGRWTVEMFLIYSLERTDIMP 160
Query: 218 VGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSWYMWRLME 265
+ DLG+R+GL+ +Y L+++P ++ + +PYR+V SWY+WR +E
Sbjct: 161 LDDLGIRQGLRYVYDLQDMPKPRDLQALSLHCQPYRTVASWYLWRALE 208
>gi|448485460|ref|ZP_21606685.1| HhH-GPD family protein [Halorubrum arcis JCM 13916]
gi|445818114|gb|EMA67981.1| HhH-GPD family protein [Halorubrum arcis JCM 13916]
Length = 198
Score = 137 bits (346), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 70/185 (37%), Positives = 105/185 (56%), Gaps = 4/185 (2%)
Query: 79 KDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNILP 138
+DP +A L+D H P + F L SI+ QQL+ +A +I RF+ + G+ P
Sbjct: 11 EDPTMAALVDRHGPLDVAPADDEFGRLCTSIVNQQLSTASANAIRERFLDVLGGDPT--P 68
Query: 139 DAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDG--ILSDESIVEMDDVTMFKMLTSVKG 196
D VLA LRE G+S K YLR++A + D + E + + D + LT ++G
Sbjct: 69 DRVLAADEDALREAGLSGTKVEYLRNVATAFRDDERDFTREGLAGVSDEAVADRLTEIRG 128
Query: 197 IGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVG 256
+G W+ MF+IF+L + DVLP+GDL VRKG++ +Y E +M E+ E W+PYRS
Sbjct: 129 VGEWTARMFLIFALGREDVLPLGDLAVRKGIEQVYHSGEELSRAEMREIGEAWRPYRSYS 188
Query: 257 SWYMW 261
+ Y+W
Sbjct: 189 TRYIW 193
>gi|398872674|ref|ZP_10627959.1| HhH-GPD superfamily base excision DNA repair protein [Pseudomonas
sp. GM74]
gi|398202049|gb|EJM88906.1| HhH-GPD superfamily base excision DNA repair protein [Pseudomonas
sp. GM74]
Length = 205
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 73/202 (36%), Positives = 114/202 (56%), Gaps = 11/202 (5%)
Query: 64 TFKGEVDIALRHLRDK-DPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSI 122
F +D RH D P L H+P ++R P+ SL ++I YQQL KA +I
Sbjct: 10 AFLASIDEDWRHHIDAIGPCL------HQP---HAARDPYESLVRAIAYQQLHAKAGDAI 60
Query: 123 YTRFVALFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSD-ESIVE 181
R +ALF P+ ++A +LR G S K + ++ +A+ DG++ D + +
Sbjct: 61 VGRLLALFGSGSFPRPEQIVATDFDRLRSCGFSANKITTIQGIAQASLDGVVPDYATALA 120
Query: 182 MDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALK 241
MDD + + L +++G+G W+V M +I+SL +PD+LP D GVR+G + L GL+ P +
Sbjct: 121 MDDQALIERLITLRGVGRWTVEMLLIYSLERPDILPADDFGVREGYRRLKGLQVQPTRKQ 180
Query: 242 MEEVCEKWKPYRSVGSWYMWRL 263
M E+ W PYR+V SWY+WR+
Sbjct: 181 MIEIGLAWSPYRTVASWYLWRV 202
>gi|452003987|gb|EMD96443.1| hypothetical protein COCHEDRAFT_1162091 [Cochliobolus
heterostrophus C5]
Length = 434
Score = 137 bits (345), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 82/209 (39%), Positives = 110/209 (52%), Gaps = 18/209 (8%)
Query: 75 HLRDKDPLLATLIDAHR-----PPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVAL 129
HL + DP L TLI+ H P PF +L+ I+ QQ++ +AA SI ++F AL
Sbjct: 217 HLVNVDPKLKTLIEKHHCKIFSPEGLREVVDPFTALSSGIIGQQVSSQAAASIRSKFTAL 276
Query: 130 FNGEDNILPD--AVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTM 187
F P VLA+ LR G+S RKA Y+ LAEK+ G LS E +V D +
Sbjct: 277 FPSTHPSFPSPSQVLALPLPTLRTAGLSQRKAEYIHGLAEKFASGELSAEMLVSASDEEL 336
Query: 188 FKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYG-----LKELPGALK- 241
+ L +V+G+G WSV MF F L + DV GDLGV++G+ V G LK G K
Sbjct: 337 IEKLVAVRGLGRWSVEMFACFGLKRMDVFSTGDLGVQRGMAVYAGRDVSKLKNKGGKWKY 396
Query: 242 -----MEEVCEKWKPYRSVGSWYMWRLME 265
M K+ PYRS+ WYMWR+ +
Sbjct: 397 MSEQEMLATAAKFSPYRSLLMWYMWRIAD 425
>gi|430804838|ref|ZP_19431953.1| DNA-3-methyladenine glycosylase [Cupriavidus sp. HMR-1]
gi|429502965|gb|ELA01268.1| DNA-3-methyladenine glycosylase [Cupriavidus sp. HMR-1]
Length = 219
Score = 137 bits (345), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 65/167 (38%), Positives = 103/167 (61%), Gaps = 1/167 (0%)
Query: 98 SRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNILPDAVLAVSPQQLREIGVSYR 157
+R P+ +L ++I YQQL KA +I R +AL+ G P+ +LA +P+ R G S
Sbjct: 50 AREPYEALVRAIAYQQLHAKAGDAILGRLLALYPGVSFPAPEQLLASAPELQRACGFSAE 109
Query: 158 KASYLRDLAEKYTDGILSD-ESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVL 216
K + +R +A+ DG++ + E + D + + LTS++G+G W+V MF+I+SL + DVL
Sbjct: 110 KLATIRRIAQATVDGVVPNLEEARRLPDTVLIERLTSLRGVGRWTVEMFLIYSLERSDVL 169
Query: 217 PVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSWYMWRL 263
PV D GVR+G L GL++ +M E+ E W P+R+V +WY+W L
Sbjct: 170 PVDDFGVREGYGRLKGLEKAHTPRQMREIGEAWSPFRTVAAWYLWHL 216
>gi|448328235|ref|ZP_21517549.1| HhH-GPD family protein [Natrinema versiforme JCM 10478]
gi|445616422|gb|ELY70049.1| HhH-GPD family protein [Natrinema versiforme JCM 10478]
Length = 196
Score = 137 bits (345), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 69/183 (37%), Positives = 105/183 (57%), Gaps = 3/183 (1%)
Query: 79 KDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNILP 138
+DP++A LID H P E + L SI+ QQL+ +A ++ R LF GE + P
Sbjct: 11 RDPVMAELIDRH-DPYVEQDWDEYERLCISIINQQLSTASAAAVRDRVFELFRGE--VTP 67
Query: 139 DAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIG 198
+AVL + L G+S K YLR+ A + + + E + + + + LT +KGIG
Sbjct: 68 EAVLDAEDEALLGAGLSRSKVEYLRNAARAFRENDFTREGLADHSNEAVVDALTEIKGIG 127
Query: 199 AWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSW 258
W+ M+++F L + DVLP+GDL VR+ ++ LYG E +M EV E+W+PYRSV +
Sbjct: 128 PWTARMYLLFVLEREDVLPLGDLAVRRAIEGLYGDGEEMTRAEMREVAEQWRPYRSVATR 187
Query: 259 YMW 261
Y+W
Sbjct: 188 YLW 190
>gi|322433724|ref|YP_004215936.1| HhH-GPD family protein [Granulicella tundricola MP5ACTX9]
gi|321161451|gb|ADW67156.1| HhH-GPD family protein [Granulicella tundricola MP5ACTX9]
Length = 239
Score = 137 bits (345), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 86/212 (40%), Positives = 119/212 (56%), Gaps = 21/212 (9%)
Query: 72 ALRHLRDKDPLLATLIDAHRPPTFE--SSRSPFLSLAKSILYQQLAYKAAKSIYTRFVAL 129
A+R L DP L L++ P T + S++SPF +L SI+YQQL KAA +I+TR +
Sbjct: 18 AVRELTAADPKLGRLMERAGPYTLKLASTQSPFEALLVSIIYQQLHGKAAAAIHTRLLES 77
Query: 130 FNG---------EDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGIL-SDESI 179
F D+ P +L +QLR G+S+ KA +RDLA K +G + S I
Sbjct: 78 FGHVLTLEGKMLGDHPSPQHLLDCPNEQLRAAGLSHNKALSVRDLAAKTIEGTVPSMARI 137
Query: 180 VEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLY-GLKE--- 235
M D + + LT V+GIG W+V MF++F L +PDVLP+GD GVRKG + + GLK
Sbjct: 138 RRMTDEDVIEHLTQVRGIGRWTVEMFLMFRLGRPDVLPLGDYGVRKGFALTFQGLKPTQK 197
Query: 236 -LPGALKMEEV----CEKWKPYRSVGSWYMWR 262
P L E ++W P+ S+ SWYMWR
Sbjct: 198 VTPDLLATPEAMLKRAKRWHPWCSIASWYMWR 229
>gi|398940926|ref|ZP_10669534.1| 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase
[Pseudomonas sp. GM41(2012)]
gi|398162170|gb|EJM50375.1| 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase
[Pseudomonas sp. GM41(2012)]
Length = 223
Score = 137 bits (345), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 69/191 (36%), Positives = 112/191 (58%), Gaps = 10/191 (5%)
Query: 74 RHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGE 133
RH+ P L H+P ++R P+ SL ++I YQQL KA +I R +ALF
Sbjct: 21 RHIAAVGPCL------HQP---HAARDPYESLVRAIAYQQLHAKAGDAIVGRLLALFGTG 71
Query: 134 DNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDES-IVEMDDVTMFKMLT 192
P+ ++A QLR G S K + ++ +A+ DG++ D + + MDD + + L
Sbjct: 72 AFPRPEQIVATGFDQLRSCGFSASKIATIQGIAQAALDGVVPDYAEAMAMDDEALIERLI 131
Query: 193 SVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPY 252
+++G+G W+V M +I+SL +PD+LP D GVR+G + + GL+ P +M E+ W+PY
Sbjct: 132 TLRGVGRWTVEMLLIYSLERPDILPADDFGVREGYRRMKGLEVQPTRKQMIEIGLGWRPY 191
Query: 253 RSVGSWYMWRL 263
R+V +WY+WR+
Sbjct: 192 RTVAAWYLWRV 202
>gi|448709093|ref|ZP_21701151.1| HhH-GPD family protein [Halobiforma nitratireducens JCM 10879]
gi|445792461|gb|EMA43063.1| HhH-GPD family protein [Halobiforma nitratireducens JCM 10879]
Length = 196
Score = 137 bits (345), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 69/184 (37%), Positives = 112/184 (60%), Gaps = 5/184 (2%)
Query: 79 KDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNILP 138
+DP++A LID H P E F L SI+ QQL+ +A ++ R + +GE + P
Sbjct: 11 EDPVMADLIDRH-DPYVEPDWDEFERLCISIINQQLSTASAMAVRERTFDVLDGE--VTP 67
Query: 139 DAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIG 198
+ VLA + LR+ G+S RK Y+R+ A + + + + + + + LT +KGIG
Sbjct: 68 ETVLAADDEALRDAGLSGRKIEYMRNAARAFQEHDYTRAGLADYANDDVIDQLTEIKGIG 127
Query: 199 AWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGL-KELPGALKMEEVCEKWKPYRSVGS 257
W+ M+++F L +PD+LP+GDL VR+G++ LY +ELP A +M E+ ++W+PYRSV +
Sbjct: 128 EWTARMYLLFVLERPDILPLGDLAVRRGIEQLYADGEELPRA-EMREIAQQWRPYRSVAT 186
Query: 258 WYMW 261
Y+W
Sbjct: 187 RYIW 190
>gi|452125632|ref|ZP_21938215.1| DNA-3-methyladenine glycosylase [Bordetella holmesii F627]
gi|452128993|ref|ZP_21941569.1| DNA-3-methyladenine glycosylase [Bordetella holmesii H558]
gi|451920727|gb|EMD70872.1| DNA-3-methyladenine glycosylase [Bordetella holmesii F627]
gi|451924863|gb|EMD75003.1| DNA-3-methyladenine glycosylase [Bordetella holmesii H558]
Length = 214
Score = 137 bits (345), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 69/194 (35%), Positives = 111/194 (57%), Gaps = 2/194 (1%)
Query: 72 ALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFN 131
A+ HL +D +L +I H S +PF++LA++I+ QQ++ KAA +++ R + +
Sbjct: 17 AVAHLMRRDRILKKIIPQHSHTWLSSRGTPFVTLARAIIGQQISTKAADALWARLLEVAG 76
Query: 132 GEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKML 191
P VL LR G+S RKA Y++DLA+ + + E MDD + L
Sbjct: 77 KRPT--PATVLRAGVAGLRAAGLSQRKAEYVQDLADHFGQRKVHPERWATMDDEAVISEL 134
Query: 192 TSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKP 251
+++GIG W+ MF+IF+L +PDVLP+ DLG+ K + + Y E + EV W+P
Sbjct: 135 VAIRGIGRWTAEMFLIFNLQRPDVLPLDDLGLLKAISLHYFSGEPVSRFEAREVSLAWQP 194
Query: 252 YRSVGSWYMWRLME 265
+R+V +WY+WR +E
Sbjct: 195 WRTVATWYLWRSLE 208
>gi|448374102|ref|ZP_21557987.1| HhH-GPD family protein [Halovivax asiaticus JCM 14624]
gi|445660779|gb|ELZ13574.1| HhH-GPD family protein [Halovivax asiaticus JCM 14624]
Length = 198
Score = 137 bits (345), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 74/201 (36%), Positives = 112/201 (55%), Gaps = 7/201 (3%)
Query: 65 FKGEVDIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYT 124
F E LR+ DP++A L++ + P T E+ F L SI+ QQL+ +A +I
Sbjct: 2 FTDEAHDVLRN----DPVMAELVETYDPYT-ETEWDEFERLCVSIINQQLSTASANAIRE 56
Query: 125 RFVALFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDD 184
R + D I PD VL+ + Q L + G+S K YLR+ A + + L+ + + +
Sbjct: 57 RVYGVLG--DEITPDRVLSTADQPLLDAGLSGTKVEYLRNAARAFDENDLTRSGLADHSN 114
Query: 185 VTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEE 244
+ LT +KGIG W+ M+++F L +PDVLP+GDL +R G+Q LYG E +M
Sbjct: 115 DEVVDTLTEIKGIGEWTAEMYLLFVLERPDVLPLGDLAIRNGIQQLYGDGEKMTRAEMRT 174
Query: 245 VCEKWKPYRSVGSWYMWRLME 265
V + W+PYRSVG+ Y+W E
Sbjct: 175 VADPWRPYRSVGTRYIWAAYE 195
>gi|393775409|ref|ZP_10363722.1| 3-methyladenine dna glycosylase 8-oxoguanine dna glycosylase
[Ralstonia sp. PBA]
gi|392717459|gb|EIZ05020.1| 3-methyladenine dna glycosylase 8-oxoguanine dna glycosylase
[Ralstonia sp. PBA]
Length = 283
Score = 137 bits (345), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 72/201 (35%), Positives = 113/201 (56%), Gaps = 3/201 (1%)
Query: 70 DIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVAL 129
D A + L +D +L +I A+ P S PF++LA+S++ QQ++ KAA +++ R A
Sbjct: 85 DEACQDLMKRDRILRKIIPAYGPAHLVSRGDPFVTLARSVVGQQISVKAAHAVWERVAAA 144
Query: 130 FNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFK 189
+ P +L P++L G+S RKA Y+ DLA + G L MDD +
Sbjct: 145 C---PKLTPAQMLRAGPEKLATCGLSKRKAEYILDLASHFKAGHLHVADWATMDDEDVIA 201
Query: 190 MLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKW 249
L ++GIG W+ MF++F+L +P+VLP+ DLG+ K + V Y E + EV W
Sbjct: 202 ELVQIRGIGRWTAEMFLMFNLMRPNVLPLDDLGLIKAISVNYFSGEPVTRSEAREVAANW 261
Query: 250 KPYRSVGSWYMWRLMEAKGVL 270
+P+R+V +WY+WR +E VL
Sbjct: 262 EPWRTVATWYLWRSLEPTPVL 282
>gi|322368774|ref|ZP_08043341.1| HhH-GPD family protein [Haladaptatus paucihalophilus DX253]
gi|320551505|gb|EFW93152.1| HhH-GPD family protein [Haladaptatus paucihalophilus DX253]
Length = 205
Score = 137 bits (344), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 72/202 (35%), Positives = 116/202 (57%), Gaps = 5/202 (2%)
Query: 66 KGEVDIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTR 125
K + + A R LR+ DP++A L+D H P T ES+ + + L SI+ QQL+ +A ++ R
Sbjct: 9 KADAESAERVLRE-DPVMAELLDKHDPYT-ESNWTEYERLCISIINQQLSTASAAAVKER 66
Query: 126 FVALFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDV 185
AL + P+ VL LR+ G+S K YL++ A + + E + +
Sbjct: 67 VFALLG---EVTPETVLDAGEADLRDAGLSRTKVEYLKNAARAFRRNDFTAEGLAAHSNE 123
Query: 186 TMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEV 245
+ LT +KG+G W+ M+++F L + D+LP+GDL VR+G+Q LYG E +M E+
Sbjct: 124 EVVDALTEIKGVGDWTARMYLLFVLEREDILPLGDLAVRRGIQQLYGDGEELTREEMREI 183
Query: 246 CEKWKPYRSVGSWYMWRLMEAK 267
E+W+PYRSV + Y+W E++
Sbjct: 184 GERWRPYRSVATRYIWAEYESE 205
>gi|398954915|ref|ZP_10676186.1| HhH-GPD superfamily base excision DNA repair protein [Pseudomonas
sp. GM33]
gi|398151863|gb|EJM40399.1| HhH-GPD superfamily base excision DNA repair protein [Pseudomonas
sp. GM33]
Length = 205
Score = 137 bits (344), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 69/191 (36%), Positives = 111/191 (58%), Gaps = 10/191 (5%)
Query: 74 RHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGE 133
RH+ P L H+P ++R P+ SL ++I YQQL KA +I R +ALF
Sbjct: 21 RHIDATGPCL------HQP---HAARDPYESLVRAIAYQQLHAKAGDAIVGRLLALFGSG 71
Query: 134 DNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSD-ESIVEMDDVTMFKMLT 192
P+ ++A +LR G S K + ++ +A+ DG++ D + + MDD + + L
Sbjct: 72 AFPRPEQIVATDFDRLRSCGFSASKIATIQGIAQASLDGVVPDYATALVMDDEALIERLI 131
Query: 193 SVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPY 252
+++G+G W+V M +I+SL +PD+LP D GVR+G + L GL+ P +M E+ W PY
Sbjct: 132 TLRGVGRWTVEMLLIYSLERPDILPADDFGVREGYRRLKGLQVQPTRKQMIEIGSAWSPY 191
Query: 253 RSVGSWYMWRL 263
R+V +WY+WR+
Sbjct: 192 RTVAAWYLWRV 202
>gi|374370931|ref|ZP_09628920.1| HhH-GPD [Cupriavidus basilensis OR16]
gi|373097488|gb|EHP38620.1| HhH-GPD [Cupriavidus basilensis OR16]
Length = 312
Score = 137 bits (344), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 69/196 (35%), Positives = 111/196 (56%), Gaps = 3/196 (1%)
Query: 70 DIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVAL 129
D A L +D +L +I + P S PF++LA+S++ QQ++ KAA++++ R VA+
Sbjct: 114 DEACADLMKRDRILRKMIPTYGPAHLISRGDPFITLARSVVGQQISVKAAQTVWERLVAV 173
Query: 130 FNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFK 189
+ P +L L G+S RKA Y+ DLAE + G + S EMDD +
Sbjct: 174 C---PRLTPAQMLKAGHDNLAACGLSRRKAEYIVDLAEHFKAGRVHVNSWTEMDDEAVIA 230
Query: 190 MLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKW 249
LT ++GIG W+ MF++F+L +P+VLP+ D+G+ + Y E + EV W
Sbjct: 231 ELTQIRGIGRWTAEMFLMFNLMRPNVLPLDDVGLINAISANYFSGEPVTRSEAREVAANW 290
Query: 250 KPYRSVGSWYMWRLME 265
+P+R+V +WYMWR ++
Sbjct: 291 EPWRTVATWYMWRSLD 306
>gi|296410984|ref|XP_002835215.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295627990|emb|CAZ79336.1| unnamed protein product [Tuber melanosporum]
Length = 339
Score = 137 bits (344), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 83/228 (36%), Positives = 116/228 (50%), Gaps = 23/228 (10%)
Query: 58 KIFKPLTFKGEVDIALRHLRDKDPLLATLIDAHRPPTFESS-----RSPFLSLAKSILYQ 112
K P T + A HL DP L LI++H F + PF SL I+ Q
Sbjct: 81 KQHAPATTNTILGQATAHLLSVDPSLKWLIESHHCGIFSAEGLAELADPFQSLVSGIISQ 140
Query: 113 QLAYKAAKSIYTRFVALFNGEDNI------LPDAVLAVSPQQLREIGVSYRKASYLRDLA 166
Q++ AA++I TRF+ALF P+ V+A +LR G+S RKA Y+ LA
Sbjct: 141 QVSGAAARTIKTRFIALFAPTPTCPQPFFPTPEMVVACPNDKLRSAGLSGRKAEYVVSLA 200
Query: 167 EKYTDGILSDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKG 226
E + DG LS E + D + + LT V+GIG WS MF++F L + DV GDLG+++G
Sbjct: 201 EHFIDGTLSPEVLSTAPDAEVIERLTRVRGIGNWSAEMFLMFGLKRMDVFSTGDLGIQRG 260
Query: 227 LQVLYG--LKELPGALK----------MEEVCEKWKPYRSVGSWYMWR 262
+ +G + +L K M + E +KPYRS+ WYMWR
Sbjct: 261 MAAHFGKDVAKLKSGGKGKWKYMSETDMLRLSEGFKPYRSLFMWYMWR 308
>gi|451936283|ref|YP_007460137.1| DNA-3-methyladenine glycosylase II [Candidatus
Kinetoplastibacterium oncopeltii TCC290E]
gi|451777206|gb|AGF48181.1| DNA-3-methyladenine glycosylase II [Candidatus
Kinetoplastibacterium oncopeltii TCC290E]
Length = 203
Score = 136 bits (343), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 69/194 (35%), Positives = 114/194 (58%), Gaps = 2/194 (1%)
Query: 72 ALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFN 131
A+ L+ KD +L +I H SS SPF++LA SI+ QQ++ K A I+ +FV +F
Sbjct: 12 AVSDLKKKDRILKRIIPLHSEKKLLSSESPFITLANSIISQQISTKTASIIWGKFVKIFG 71
Query: 132 GEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKML 191
+ P ++ ++L IG+ RK YL DLA + + ++ + ++MDD ++ L
Sbjct: 72 QSPS--PKDIIHNKREELMSIGLPKRKVDYLYDLAIHFHEKKINPDKWIDMDDESVISEL 129
Query: 192 TSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKP 251
+S+KGIG W+ MF+IF+L +PDV+P+ D G+ + + + Y E + EV W+P
Sbjct: 130 SSIKGIGRWTSEMFLIFNLRRPDVMPLDDTGLIRAISLHYFSGEPVSRFEAREVSVAWRP 189
Query: 252 YRSVGSWYMWRLME 265
+R+V SWY+W +E
Sbjct: 190 WRTVASWYLWCSIE 203
>gi|397693250|ref|YP_006531130.1| DNA-3-methyladenine glycosylase II [Pseudomonas putida DOT-T1E]
gi|397329980|gb|AFO46339.1| DNA-3-methyladenine glycosylase II [Pseudomonas putida DOT-T1E]
Length = 208
Score = 136 bits (343), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 69/194 (35%), Positives = 117/194 (60%), Gaps = 3/194 (1%)
Query: 72 ALRHLRDKDPLLATLIDAHRPPTFESS--RSPFLSLAKSILYQQLAYKAAKSIYTRFVAL 129
A +HL DP + I A P +++ R P+ +L ++I YQQL +AA++I R +AL
Sbjct: 14 ATQHLAALDPDWSRHIAAIGPCLHQATPGREPYEALVRAIAYQQLHARAAEAILGRLLAL 73
Query: 130 FNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGIL-SDESIVEMDDVTMF 188
F +D P+ +LA +P+ LR G S K ++ +A+ +G++ + E + M D +
Sbjct: 74 FPADDFPQPEQLLAETPETLRACGFSASKLVTVQGIAQATLEGLVPTREQALTMADEALI 133
Query: 189 KMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEK 248
+ L +++G+G W+V M +I+SL + D+LPV D GVR+G + L GL+ P +M +
Sbjct: 134 ERLVALRGVGRWTVEMLLIYSLGRSDILPVDDFGVREGYRRLKGLETAPTPAQMRSLGGA 193
Query: 249 WKPYRSVGSWYMWR 262
W+P+R+V +WY+WR
Sbjct: 194 WRPFRTVAAWYLWR 207
>gi|293606584|ref|ZP_06688940.1| DNA-3-methyladenine glycosylase [Achromobacter piechaudii ATCC
43553]
gi|292814969|gb|EFF74094.1| DNA-3-methyladenine glycosylase [Achromobacter piechaudii ATCC
43553]
Length = 226
Score = 136 bits (343), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 73/197 (37%), Positives = 117/197 (59%), Gaps = 4/197 (2%)
Query: 70 DIALRHLRDKDPLLATLIDAHRPPTFESSR-SPFLSLAKSILYQQLAYKAAKSIYTRFVA 128
+ A+ HL +D +L +I H P + +SR +PF++LA++I+ QQ++ KAA + +T+F+
Sbjct: 27 EAAVAHLMRRDRILKKVIPQH-PEVWLTSRGTPFVTLARAIIGQQVSAKAADAAWTKFIE 85
Query: 129 LFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMF 188
P AVL V LR+ G+S RKA Y+ DLA + + + E MDD +
Sbjct: 86 AVGKRPT--PVAVLRVGVDGLRKAGLSQRKAEYVLDLAVHFGERRVHPEKWAAMDDEAVI 143
Query: 189 KMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEK 248
L +++GIG W+ MF+IF+L +PDVLP+ D G+ K + + Y E + EV
Sbjct: 144 SELVAIRGIGRWTAEMFLIFNLQRPDVLPLDDPGLLKAISLHYFSGEPVSRFEAREVSLA 203
Query: 249 WKPYRSVGSWYMWRLME 265
W+P+R+V +WY+WR +E
Sbjct: 204 WQPWRTVATWYLWRSLE 220
>gi|422320435|ref|ZP_16401496.1| DNA-3-methyladenine glycosylase [Achromobacter xylosoxidans C54]
gi|317404802|gb|EFV85181.1| DNA-3-methyladenine glycosylase [Achromobacter xylosoxidans C54]
Length = 214
Score = 136 bits (343), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 73/197 (37%), Positives = 118/197 (59%), Gaps = 4/197 (2%)
Query: 70 DIALRHLRDKDPLLATLIDAHRPPTFESSR-SPFLSLAKSILYQQLAYKAAKSIYTRFVA 128
+ A+ HL +D +L +I H P + +SR +PF++LA++I+ QQ++ KAA +++ +F+
Sbjct: 15 EAAVAHLMRRDRILKKIIPQH-PEVWLTSRGTPFVTLARAIIGQQVSAKAADAVWDKFLE 73
Query: 129 LFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMF 188
P AVL V + LR G+S RKA Y+ DLA + + + E MDD +
Sbjct: 74 AAGKRPT--PVAVLRVGLEGLRAAGLSQRKAEYVLDLAVHFGERRVHPEKWAAMDDEAVI 131
Query: 189 KMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEK 248
LT+++GIG W+ MF+IF+L +PDVLP+ D G+ K + + Y E + EV
Sbjct: 132 SELTAIRGIGRWTAEMFLIFNLQRPDVLPLDDPGLLKAISLHYFSGEPVSRFEAREVSLA 191
Query: 249 WKPYRSVGSWYMWRLME 265
W+P+R+V +WY+WR +E
Sbjct: 192 WQPWRTVATWYLWRSLE 208
>gi|257093681|ref|YP_003167322.1| HhH-GPD family protein [Candidatus Accumulibacter phosphatis clade
IIA str. UW-1]
gi|257046205|gb|ACV35393.1| HhH-GPD family protein [Candidatus Accumulibacter phosphatis clade
IIA str. UW-1]
Length = 205
Score = 136 bits (343), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 68/194 (35%), Positives = 111/194 (57%), Gaps = 11/194 (5%)
Query: 76 LRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDN 135
L DP+LA ++ S PF++L +SI+ QQ++ KAA S++ R +A
Sbjct: 13 LAQSDPVLAGFVERFAGTALVSRGDPFVTLLRSIVGQQISVKAADSVWGRLLA------- 65
Query: 136 ILP----DAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKML 191
+LP A+LA P+ LR G+S RK Y+ DLA ++ G + M D + L
Sbjct: 66 VLPVPAATALLACEPEALRRCGLSVRKVEYVIDLARRFAGGEIHVSHWASMRDAEIIAEL 125
Query: 192 TSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKP 251
T+V+G+G W+ MF+IF+ +PDV P+ D+G+++ + + Y E P + E E+W+P
Sbjct: 126 TAVRGVGVWTAEMFLIFNQLRPDVFPLDDIGLQRAVGIHYHGGERPPRRLLAEHGERWRP 185
Query: 252 YRSVGSWYMWRLME 265
+RSV +WY+WR ++
Sbjct: 186 WRSVATWYLWRSLD 199
>gi|358365981|dbj|GAA82602.1| DNA-3-methyladenine glycosylase [Aspergillus kawachii IFO 4308]
Length = 410
Score = 136 bits (343), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 101/292 (34%), Positives = 141/292 (48%), Gaps = 42/292 (14%)
Query: 15 PSASSKITFPP--RKIR-KLTTITPITKIAEIPVATAISTNSDNSP-KIFKP---LTFKG 67
P+ SS+ T PP R + T T +T VA T++D SP K +P T
Sbjct: 112 PTPSSRTTPPPLDRPVEPHHTNATLLTPHGSSLVAYPPGTDADASPSKTGRPRPTATTGT 171
Query: 68 EVDIALRHLRDKDPLLATLIDAHRPPTFESSR-----SPFLSLAKSILYQQLAYKAAKSI 122
++ A HL DP L +LI H P F PF SL SI+ QQ++ AAKSI
Sbjct: 172 LLEQAAAHLIATDPRLESLIREHPCPLFTPEGLAEEIDPFRSLVSSIIGQQVSGAAAKSI 231
Query: 123 YTRFVALFNGEDN----------------ILPDAVLAVSPQQLREIGVSYRKASYLRDLA 166
+FVALFN N P+ ++ LR G+S RKA Y+ L+
Sbjct: 232 RDKFVALFNTNTNDNKKDENGGTIRTSFFPTPEDIIKKDITTLRTAGLSQRKAEYIHGLS 291
Query: 167 EKYTDGILSDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKG 226
EK+ +G LS ++ D + + LT+V+G+G WSV MF F+L + DV GDLGV++G
Sbjct: 292 EKFANGELSARMLLNASDEELVEKLTAVRGLGKWSVEMFACFALKRIDVFSTGDLGVQRG 351
Query: 227 LQVLYGLKELPGAL-------------KMEEVCEKWKPYRSVGSWYMWRLME 265
V G K++ M E+ K+ PYRS+ WYMWR+ +
Sbjct: 352 CAVFVG-KDVNKLKGKGGGKFKYMPEKDMLELAAKFAPYRSLFMWYMWRVTD 402
>gi|423013096|ref|ZP_17003817.1| DNA-3-methyladenine glycosylase [Achromobacter xylosoxidans AXX-A]
gi|338783932|gb|EGP48283.1| DNA-3-methyladenine glycosylase [Achromobacter xylosoxidans AXX-A]
Length = 214
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 73/197 (37%), Positives = 118/197 (59%), Gaps = 4/197 (2%)
Query: 70 DIALRHLRDKDPLLATLIDAHRPPTFESSR-SPFLSLAKSILYQQLAYKAAKSIYTRFVA 128
+ A+ HL +D +L +I H P + +SR +PF++LA++I+ QQ++ KAA +++ +F+
Sbjct: 15 EAAVAHLMRRDRILKKIIPQH-PEVWLTSRGTPFVTLARAIIGQQVSAKAADAVWDKFLE 73
Query: 129 LFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMF 188
P AVL V + LR G+S RKA Y+ DLA + + + E MDD +
Sbjct: 74 AAGKRPT--PVAVLRVGLEGLRAAGLSQRKAEYVLDLAVHFGERRVHPEKWAAMDDEAVI 131
Query: 189 KMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEK 248
LT+++GIG W+ MF+IF+L +PDVLP+ D G+ K + + Y E + EV
Sbjct: 132 SELTAIRGIGRWTAEMFLIFNLQRPDVLPLDDPGLLKAISLHYFSGEPVSRFEAREVSLA 191
Query: 249 WKPYRSVGSWYMWRLME 265
W+P+R+V +WY+WR +E
Sbjct: 192 WQPWRTVATWYLWRSLE 208
>gi|452836605|gb|EME38549.1| hypothetical protein DOTSEDRAFT_140695 [Dothistroma septosporum
NZE10]
Length = 305
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 73/184 (39%), Positives = 109/184 (59%), Gaps = 21/184 (11%)
Query: 101 PFLSLAKSILYQQLAYKAAKSIYTRFVALFNGED---NILPDAVLAVSP-QQLREIGVSY 156
PF S++ I+ QQ++ AAKSI +F+ALF + P A++A +P +LRE G+S
Sbjct: 115 PFRSISSGIMAQQVSGAAAKSIKNKFIALFEPDQCPTGFPPPALVAATPISRLREAGLSQ 174
Query: 157 RKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVL 216
RKA Y++ LA+K+ G ++ + ++E D +F L +V+G+GAWSV MFM F L + DV
Sbjct: 175 RKAEYIQGLAQKFDSGEITVKQLMEGSDEDVFSQLIAVRGLGAWSVEMFMCFGLKRMDVF 234
Query: 217 PVGDLGVRKGLQVLYGLKELPGALK---------------MEEVCEKWKPYRSVGSWYMW 261
GDLGV++G+ G G LK M E+ E+++PYRS+ WYMW
Sbjct: 235 STGDLGVQRGMAAYMGRDV--GKLKAKGSNNKWKYMSEKEMVEIAERFRPYRSLFMWYMW 292
Query: 262 RLME 265
R+ E
Sbjct: 293 RIEE 296
>gi|194690146|gb|ACF79157.1| unknown [Zea mays]
Length = 121
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 58/86 (67%), Positives = 74/86 (86%)
Query: 182 MDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALK 241
MDD ++ MLT VKGIGAWSVHMFMIFSL +PDVLP DLGVRKG+Q+LY L+++P +
Sbjct: 1 MDDRSLAAMLTMVKGIGAWSVHMFMIFSLARPDVLPSADLGVRKGVQMLYALQDVPRPSQ 60
Query: 242 MEEVCEKWKPYRSVGSWYMWRLMEAK 267
M+ +CE+W+PYRSVG+WYMWRL+E+K
Sbjct: 61 MDRLCERWRPYRSVGAWYMWRLIESK 86
>gi|430760426|ref|YP_007216283.1| HhH-GPD base excision DNA repair family protein; Probable
3-methyladenine DNA glycosylase/8-oxoguanine DNA
glycosylase [Thioalkalivibrio nitratireducens DSM 14787]
gi|430010050|gb|AGA32802.1| HhH-GPD base excision DNA repair family protein; Probable
3-methyladenine DNA glycosylase/8-oxoguanine DNA
glycosylase [Thioalkalivibrio nitratireducens DSM 14787]
Length = 206
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 71/199 (35%), Positives = 113/199 (56%), Gaps = 3/199 (1%)
Query: 72 ALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFN 131
A L DP++A LI + + PF +LA++I+ QQ++ KAA S++ RF A
Sbjct: 10 ACADLAGTDPVMAALIARYPDAVLTTRGDPFQTLARAIVGQQISVKAADSVWQRFAAFVV 69
Query: 132 GEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKML 191
++ P+ ++A+ + L G+S RKA YLRDLA + DG + +M D + L
Sbjct: 70 ---SVRPEQIVALELESLAACGLSRRKAEYLRDLAGHFVDGRIQPARWQDMTDEAVIAEL 126
Query: 192 TSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKP 251
V+GIG W+ MF+IF+L +PDV PV D+G++K + + Y E P + E+ P
Sbjct: 127 VDVRGIGRWTAEMFLIFNLLRPDVWPVDDIGLQKAVALHYLDNERPTPRTLRRHGERHAP 186
Query: 252 YRSVGSWYMWRLMEAKGVL 270
+R+V +WY+WR ++ VL
Sbjct: 187 WRTVATWYLWRSLDPTVVL 205
>gi|226940662|ref|YP_002795736.1| HhH-GPD family protein [Laribacter hongkongensis HLHK9]
gi|226715589|gb|ACO74727.1| HhH-GPD family protein [Laribacter hongkongensis HLHK9]
Length = 208
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 70/202 (34%), Positives = 124/202 (61%), Gaps = 3/202 (1%)
Query: 70 DIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVAL 129
D A L DP++A LI + S PF +L ++I+ QQ++ +AA +++ R A+
Sbjct: 8 DNACAGLAAADPVMARLIASWPDAELVSRGEPFETLLRAIVGQQISVRAADAVWKRLSAV 67
Query: 130 FNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFK 189
+G+ + P+ VLA+ + LR G+S RK Y RDLAE +TDG ++ + +DD +
Sbjct: 68 LSGQPS--PERVLALPEEVLRSAGLSARKVLYARDLAECFTDGRVNPAAHAGLDDEALIA 125
Query: 190 MLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGAL-KMEEVCEK 248
L +V+GIG W+ M++IF+ +PDV PV D+G+++ + Y L++ +L ++ + E+
Sbjct: 126 ELVAVRGIGRWTAEMYLIFNQLRPDVWPVDDIGLQRAMARHYALEDQKASLTQLRVMGER 185
Query: 249 WKPYRSVGSWYMWRLMEAKGVL 270
+ P+R+V +WY+WR ++ + VL
Sbjct: 186 FAPWRTVATWYLWRSLDPQTVL 207
>gi|430806606|ref|ZP_19433721.1| 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase
[Cupriavidus sp. HMR-1]
gi|429501115|gb|EKZ99460.1| 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase
[Cupriavidus sp. HMR-1]
Length = 261
Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 69/196 (35%), Positives = 112/196 (57%), Gaps = 3/196 (1%)
Query: 70 DIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVAL 129
D A L +D +L +I + P S PF++LA+SI+ QQ++ KAA+S++ R A+
Sbjct: 63 DEACADLMKRDRILRKMIPTYGPAHLVSRGDPFVTLARSIVGQQISVKAAQSVWERLAAM 122
Query: 130 FNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFK 189
+ P L P++L G+S RKA Y+ DLA+ + G + + V MDD +
Sbjct: 123 C---PRLTPAQFLKSGPEELAGCGLSKRKAEYIIDLADHFKAGRVHVKEWVAMDDEAVIA 179
Query: 190 MLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKW 249
LT ++GIG W+ MF++F+L +P+VLP+ D+G+ + Y E + EV W
Sbjct: 180 ELTQIRGIGRWTAEMFLMFNLMRPNVLPLDDVGLINAISTNYFSGEPVTRSEAREVAANW 239
Query: 250 KPYRSVGSWYMWRLME 265
+P+R+V +WYMWR ++
Sbjct: 240 EPWRTVATWYMWRSLD 255
>gi|222480157|ref|YP_002566394.1| HhH-GPD family protein [Halorubrum lacusprofundi ATCC 49239]
gi|222453059|gb|ACM57324.1| HhH-GPD family protein [Halorubrum lacusprofundi ATCC 49239]
Length = 198
Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 71/185 (38%), Positives = 104/185 (56%), Gaps = 4/185 (2%)
Query: 79 KDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNILP 138
+D +A LID H T E + F L SI+ QQL+ +A +I+ RFV + G P
Sbjct: 11 EDSTMARLIDRHGRLTIEPAADEFARLCTSIVNQQLSTASAAAIHERFVDVLGGAPT--P 68
Query: 139 DAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGI--LSDESIVEMDDVTMFKMLTSVKG 196
D VLA LRE G+S K YLR+ A + DG L+ E + D + LT ++G
Sbjct: 69 DDVLAADEVALREAGLSGTKVEYLREAAAAFRDGDRDLTREGFGDASDEAVVAALTEIRG 128
Query: 197 IGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVG 256
+G W+ M++IF+L + DVLP+GDL VRKG++ +Y +M + + W+PYRS G
Sbjct: 129 VGEWTARMYLIFALGREDVLPLGDLAVRKGIEQVYNDGAELTRAEMRNIGDAWRPYRSYG 188
Query: 257 SWYMW 261
+ Y+W
Sbjct: 189 TRYVW 193
>gi|421081227|ref|ZP_15542141.1| Putative DNA-3-methyladenine glycosylase [Pectobacterium wasabiae
CFBP 3304]
gi|401704237|gb|EJS94446.1| Putative DNA-3-methyladenine glycosylase [Pectobacterium wasabiae
CFBP 3304]
Length = 220
Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 66/170 (38%), Positives = 106/170 (62%), Gaps = 6/170 (3%)
Query: 99 RSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNILP--DAVLAVSPQQLREIGVSY 156
R P+ +L +++ YQQL +A ++ + L D++ P + VLA S LR+ G S
Sbjct: 42 REPYEALMRAVAYQQLTTRAGDAMVAK---LLRVHDDVFPNPEQVLACSTDTLRQCGFSA 98
Query: 157 RKASYLRDLAEKYTDGIL-SDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDV 215
RKA L +A+ G++ S E E DD T+ + LTS+KGIG W+V MF+I+SL + D+
Sbjct: 99 RKADTLHGIAQGVLSGLVPSLEQAAERDDDTLIQQLTSLKGIGRWTVEMFLIYSLERTDI 158
Query: 216 LPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSWYMWRLME 265
+P+ DLG+R+GL+ +Y L ++P ++ + +PYR+V SWY+WR +E
Sbjct: 159 MPLDDLGIRQGLRYVYDLPDMPKPRDLQALSLSCQPYRTVASWYLWRSLE 208
>gi|448382353|ref|ZP_21562068.1| HhH-GPD family protein [Haloterrigena thermotolerans DSM 11522]
gi|445661952|gb|ELZ14729.1| HhH-GPD family protein [Haloterrigena thermotolerans DSM 11522]
Length = 196
Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 66/182 (36%), Positives = 106/182 (58%), Gaps = 3/182 (1%)
Query: 80 DPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNILPD 139
DP++A L+D H P E S + L SI+ QQL+ +A ++ R + GE + P+
Sbjct: 12 DPVMAGLLDRH-DPYVEPDWSEYERLCISIINQQLSTASAAAVRERVFEVLEGE--VTPE 68
Query: 140 AVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIGA 199
+VLA LR+ G+S RK Y+R+ A + + + + + + +LT +KG+G
Sbjct: 69 SVLAADEAALRDAGLSRRKVEYVRNAAHAFREADYTRAGLASYSNAEVVDLLTEIKGVGE 128
Query: 200 WSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSWY 259
W+ M+++F L +PDVLP+GDL VR+G++ LY E +M E+ + WKPYRSV + Y
Sbjct: 129 WTARMYLLFVLERPDVLPLGDLAVRRGIEQLYADGEELTRAEMREIAKPWKPYRSVATRY 188
Query: 260 MW 261
+W
Sbjct: 189 IW 190
>gi|50119849|ref|YP_049016.1| DNA-3-methyladenine glycosylase [Pectobacterium atrosepticum
SCRI1043]
gi|49610375|emb|CAG73819.1| putative DNA-3-methyladenine glycosylase [Pectobacterium
atrosepticum SCRI1043]
Length = 220
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 70/196 (35%), Positives = 119/196 (60%), Gaps = 8/196 (4%)
Query: 75 HLRDKDPLLATLIDAHRPPTFESS--RSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNG 132
HL +P A++I+ +++ R P+ +L +++ YQQL +A ++ + L
Sbjct: 16 HLSAINPRWASVIEQVGDCRHQTAPHREPYEALMRAVAYQQLTTRAGDAMVAK---LLRV 72
Query: 133 EDNILP--DAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGIL-SDESIVEMDDVTMFK 189
D++ P + +LA S LR+ G S RKA L +A+ G++ S E MDD T+ +
Sbjct: 73 HDDVFPSPEQMLACSTDTLRQCGFSARKADTLHGIAQGALSGLVPSLERAANMDDDTLIQ 132
Query: 190 MLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKW 249
LTS+KGIG W+V MF+I+SL + D++P+ DLG+R+GL+ +Y L ++P ++ + +
Sbjct: 133 QLTSLKGIGRWTVEMFLIYSLERTDIMPLDDLGIRQGLRYVYDLPDMPKPRDLQALSLQC 192
Query: 250 KPYRSVGSWYMWRLME 265
+PYR+V SWY+WR +E
Sbjct: 193 QPYRTVASWYLWRSLE 208
>gi|393217884|gb|EJD03373.1| DNA glycosylase [Fomitiporia mediterranea MF3/22]
Length = 440
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 76/190 (40%), Positives = 110/190 (57%), Gaps = 18/190 (9%)
Query: 56 SPKIFKPLTFKGEVDIALRHLRDKDPLLATLIDAHRPPTFESSR--SPFLSLAKSILYQQ 113
+P F P + A +HL DP L + FE PF +LA SIL QQ
Sbjct: 78 TPATFLPAVLSFSFEDAKQHLVSVDPRFEDLFSKLKCRPFEHLERVDPFRTLATSILGQQ 137
Query: 114 LAYKAAKSIYTRFVALFN--------------GEDNILPDA--VLAVSPQQLREIGVSYR 157
+++ AA+SI RF+ LF+ D+ P A V+A LR G+S R
Sbjct: 138 ISWLAARSIVHRFIRLFDPSLPEKPTDSGSTSNPDSFFPSAHQVVAQDIATLRTAGLSGR 197
Query: 158 KASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLP 217
KA Y++DLA ++ DG LS+E I++ +D +++MLT+V+GIG W+V MF IFSL +PD++P
Sbjct: 198 KAEYVQDLAARFADGRLSNEKIMQANDEELYEMLTAVRGIGKWTVDMFAIFSLRRPDIMP 257
Query: 218 VGDLGVRKGL 227
VGDLGV++G+
Sbjct: 258 VGDLGVQRGV 267
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 32/58 (55%), Gaps = 9/58 (15%)
Query: 213 PDVLPVGDLGVRKGLQVLYGLKELPGAL----KMEEVCEKWKPYRSVGSWYMWRLMEA 266
P+ L V DL R L G K+ G +MEE+ E WKPYRS+G +YMW L E
Sbjct: 385 PEGLSVKDLQSR-----LEGKKQKKGVFLTPKEMEELTEPWKPYRSIGVYYMWALSEG 437
>gi|433591844|ref|YP_007281340.1| HhH-GPD superfamily base excision DNA repair protein [Natrinema
pellirubrum DSM 15624]
gi|433306624|gb|AGB32436.1| HhH-GPD superfamily base excision DNA repair protein [Natrinema
pellirubrum DSM 15624]
Length = 209
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 72/206 (34%), Positives = 113/206 (54%), Gaps = 7/206 (3%)
Query: 56 SPKIFKPLTFKGEVDIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLA 115
SP L+ E LR DP++A L+D H P E S + L SI+ QQL+
Sbjct: 5 SPTPVSYLSMNDEAHDVLR----ADPVMAGLLDRH-DPYVEPDWSEYERLCISIINQQLS 59
Query: 116 YKAAKSIYTRFVALFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILS 175
+A ++ R + +GE + P++VLA + +R+ G+ RK Y+R+ A + + S
Sbjct: 60 TASAAAVRERVFEVLDGE--VTPESVLAADDEAIRDAGLFRRKIEYVRNAARAFRENDYS 117
Query: 176 DESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKE 235
+ D + +LT + GIG W+ M+++F L +PDVLP+GDL VR+G++ LY E
Sbjct: 118 RTGLASHSDGEVVDLLTEITGIGEWTARMYLLFVLERPDVLPLGDLAVRRGIEQLYADGE 177
Query: 236 LPGALKMEEVCEKWKPYRSVGSWYMW 261
+M E+ E W+PYRSV + Y+W
Sbjct: 178 ELTRAEMREIAEPWRPYRSVATRYIW 203
>gi|426409808|ref|YP_007029907.1| DNA-3-methyladenine glycosylase II [Pseudomonas sp. UW4]
gi|426268025|gb|AFY20102.1| DNA-3-methyladenine glycosylase II [Pseudomonas sp. UW4]
Length = 205
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 69/191 (36%), Positives = 111/191 (58%), Gaps = 10/191 (5%)
Query: 74 RHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGE 133
RH+ P L H+P ++R P+ SL ++I YQQL KA +I R +ALF
Sbjct: 21 RHIDAIGPCL------HQP---HAARDPYESLVRAIAYQQLHAKAGDAIVGRLLALFGSG 71
Query: 134 DNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSD-ESIVEMDDVTMFKMLT 192
P+ ++A +LR G S K + ++ +A+ DG++ D + + MDD + + L
Sbjct: 72 SFPRPEQIVATDFDRLRSCGFSASKIATIQGIAQASLDGVVPDYATALAMDDEALIERLI 131
Query: 193 SVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPY 252
+++G+G W+V M +I+SL +PD+LP D GVR+G + L GL+ P +M E+ W PY
Sbjct: 132 TLRGVGRWTVEMLLIYSLERPDILPADDFGVREGYRRLKGLEVQPTRKQMIEIGLAWSPY 191
Query: 253 RSVGSWYMWRL 263
R+V +WY+WR+
Sbjct: 192 RTVAAWYLWRV 202
>gi|187479045|ref|YP_787069.1| DNA-3-methyladenine glycosylase [Bordetella avium 197N]
gi|115423631|emb|CAJ50171.1| DNA-3-methyladenine glycosylase [Bordetella avium 197N]
Length = 214
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 70/194 (36%), Positives = 110/194 (56%), Gaps = 2/194 (1%)
Query: 72 ALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFN 131
A+ HL +D +L +I H S SPF++LA++I+ QQ++ AA ++TR + +
Sbjct: 17 AVAHLMRRDRILKKIIPQHSHTWLMSRGSPFVTLARAIVGQQISTTAADGLWTRLLDVAG 76
Query: 132 GEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKML 191
P VL Q LR G+S RKA Y++DLA+ + + E MDD + L
Sbjct: 77 KRPT--PATVLRAGVQGLRAAGLSQRKAEYVQDLADHFGQRKVHPERWATMDDEAVISEL 134
Query: 192 TSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKP 251
+++GIG W+ MF+IF+L +PDVLP+ D G+ K + + Y E + EV W+P
Sbjct: 135 VAIRGIGRWTAEMFLIFNLQRPDVLPLDDPGLLKAISLHYFSGEPVSRFEAREVSLAWQP 194
Query: 252 YRSVGSWYMWRLME 265
+R+V +WY+WR +E
Sbjct: 195 WRTVATWYLWRSLE 208
>gi|125553453|gb|EAY99162.1| hypothetical protein OsI_21121 [Oryza sativa Indica Group]
Length = 137
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 60/86 (69%), Positives = 73/86 (84%)
Query: 182 MDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALK 241
MDD + MLT VKGIGAWSVHMFMIFSL++PDVLP DLGVRKG+Q LYGL +P +
Sbjct: 1 MDDRSFAAMLTMVKGIGAWSVHMFMIFSLNRPDVLPAADLGVRKGVQHLYGLDAVPRPSQ 60
Query: 242 MEEVCEKWKPYRSVGSWYMWRLMEAK 267
ME++CE+W+PYRSVG+WYMWRL+E+K
Sbjct: 61 MEKLCEQWRPYRSVGAWYMWRLIESK 86
>gi|398890353|ref|ZP_10643990.1| HhH-GPD superfamily base excision DNA repair protein [Pseudomonas
sp. GM55]
gi|398188317|gb|EJM75625.1| HhH-GPD superfamily base excision DNA repair protein [Pseudomonas
sp. GM55]
Length = 205
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 69/191 (36%), Positives = 111/191 (58%), Gaps = 10/191 (5%)
Query: 74 RHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGE 133
RH+ P L H+P ++R P+ SL ++I YQQL KA +I R +ALF
Sbjct: 21 RHIDTIGPCL------HQP---HAARDPYESLVRAIAYQQLHAKAGDAIVGRLLALFGSG 71
Query: 134 DNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDE-SIVEMDDVTMFKMLT 192
P+ ++A +LR G S K + ++ +A+ DG++ D + + MDD + + L
Sbjct: 72 SFPRPEQIVATDFDRLRSCGFSASKIATIQGIAQAALDGVVPDYVTALAMDDEALIERLI 131
Query: 193 SVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPY 252
+++G+G W+V M +I+SL +PD+LP D GVR+G + L GL+ P +M E+ W P+
Sbjct: 132 TLRGVGRWTVEMLLIYSLDRPDILPADDFGVREGYKRLKGLEVQPTRRQMIEIGMGWSPF 191
Query: 253 RSVGSWYMWRL 263
R+V SWY+WR+
Sbjct: 192 RTVASWYLWRV 202
>gi|113867242|ref|YP_725731.1| 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase
[Ralstonia eutropha H16]
gi|113526018|emb|CAJ92363.1| 3-Methyladenine DNA glycosylase/8-oxoguanine DNAglycosylase
[Ralstonia eutropha H16]
Length = 279
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 75/240 (31%), Positives = 122/240 (50%), Gaps = 15/240 (6%)
Query: 26 RKIRKLTTITPITKIAEIPVATAISTNSDNSPKIFKPLTFKGEVDIALRHLRDKDPLLAT 85
R R + P +PV T I +P + D A L +D +L
Sbjct: 49 RDTRNAKAVLPEADAVPLPVETVIDA--------VRPAYW----DEACADLMKRDRILRK 96
Query: 86 LIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNILPDAVLAVS 145
+I + P S PF++LA++++ QQ++ KAA+S++ R AL + P L
Sbjct: 97 MIPTYGPAHLVSRGDPFVTLARAVVGQQISVKAAQSVWERLHALC---PRLTPAQFLRAG 153
Query: 146 PQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIGAWSVHMF 205
P++L G+S RK YL DLA+ + G + +MDD + LT ++GIG W+ MF
Sbjct: 154 PEKLAGCGLSKRKGEYLVDLADHFKAGTVHVGEWAQMDDEAVIAELTQIRGIGRWTAEMF 213
Query: 206 MIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSWYMWRLME 265
++F+L +P+VLP+ D+G+ + Y E + EV W+P+R+V +WYMWR ++
Sbjct: 214 LMFNLMRPNVLPLDDIGLINAISANYFSGEPVTRSEAREVAANWEPWRTVATWYMWRSLD 273
>gi|423697807|ref|ZP_17672297.1| DNA-3-methyladenine glycosylase [Pseudomonas fluorescens Q8r1-96]
gi|388004912|gb|EIK66179.1| DNA-3-methyladenine glycosylase [Pseudomonas fluorescens Q8r1-96]
Length = 205
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 64/167 (38%), Positives = 101/167 (60%), Gaps = 1/167 (0%)
Query: 98 SRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNILPDAVLAVSPQQLREIGVSYR 157
+R P+ +L ++I YQQL KA +I R +ALF + P +LA QLR G S
Sbjct: 36 ARDPYEALVRAIAYQQLHAKAGDAILGRLLALFPAQAFPNPGQILATDVAQLRGCGFSAS 95
Query: 158 KASYLRDLAEKYTDGILSDESIVE-MDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVL 216
K + ++ +A+ D I+ D + M+D + + L S++G+G W+V M +I+SL +PD+L
Sbjct: 96 KIATIQGIAQATLDAIVPDYATARAMEDEALIERLVSLRGVGRWTVEMLLIYSLERPDIL 155
Query: 217 PVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSWYMWRL 263
P D GVR+G + L GL++ P +M E+ W PYR+V +WY+WR+
Sbjct: 156 PADDFGVREGYRRLKGLEQQPSRKRMVEIGLAWSPYRTVAAWYLWRV 202
>gi|452984188|gb|EME83945.1| hypothetical protein MYCFIDRAFT_135013 [Pseudocercospora fijiensis
CIRAD86]
Length = 300
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 80/216 (37%), Positives = 118/216 (54%), Gaps = 21/216 (9%)
Query: 69 VDIALRHLRDKDPLLATLIDAH-----RPPTFESSRSPFLSLAKSILYQQLAYKAAKSIY 123
+D A +HL D L +I+ H P PF SL I+ QQ++ AAKSI
Sbjct: 67 LDDACKHLISVDEKLRPVIEKHYCRIFSPEGLAEQIDPFRSLTSGIMAQQVSGAAAKSIK 126
Query: 124 TRFVALFNGE---DNILPDAVLAVSP-QQLREIGVSYRKASYLRDLAEKYTDGILSDESI 179
+F++LF E + P +++A + LR G+S RKA Y++ LA+K+ G LS + +
Sbjct: 127 NKFISLFPAEACPNGFPPPSIVAKTDIATLRTAGLSQRKAEYIQGLAQKFHSGELSAKML 186
Query: 180 VEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYG-----LK 234
+E D + + L +V+G+GAWSV MFM F L + D+ GDLGV++G+ G LK
Sbjct: 187 MEGSDEEVMEKLVAVRGLGAWSVEMFMCFGLKRMDIFSTGDLGVQRGMSAFVGRDVAKLK 246
Query: 235 ELPGA-------LKMEEVCEKWKPYRSVGSWYMWRL 263
G M E+ EK++PYRS+ WYMWR+
Sbjct: 247 AKGGGKWKYMSEKDMLEISEKFRPYRSLFMWYMWRI 282
>gi|398994355|ref|ZP_10697257.1| 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase
[Pseudomonas sp. GM21]
gi|398132227|gb|EJM21507.1| 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase
[Pseudomonas sp. GM21]
Length = 205
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 69/191 (36%), Positives = 111/191 (58%), Gaps = 10/191 (5%)
Query: 74 RHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGE 133
RH+ P L H+P ++R P+ SL ++I YQQL KA +I R +ALF
Sbjct: 21 RHIAAIGPCL------HQP---HAARDPYESLVRAIAYQQLHAKAGDAIVGRLLALFPSA 71
Query: 134 DNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSD-ESIVEMDDVTMFKMLT 192
P+ +LA QLR G S K + ++ +A+ DG++ + + + M+D + + L
Sbjct: 72 AFPRPEQILAAGFDQLRSCGFSAGKIATIQGIAQATLDGVVPEYATALAMEDEALIERLI 131
Query: 193 SVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPY 252
+++G+G W+V M +I+SL +PD+LP D GVR+G + L GL+ P +M E+ W PY
Sbjct: 132 TLRGVGRWTVEMLLIYSLERPDILPADDFGVREGYRRLKGLEVQPTRKQMVEIGLAWSPY 191
Query: 253 RSVGSWYMWRL 263
R+V +WY+WR+
Sbjct: 192 RTVAAWYLWRV 202
>gi|448344028|ref|ZP_21532944.1| HhH-GPD family protein [Natrinema gari JCM 14663]
gi|445621742|gb|ELY75211.1| HhH-GPD family protein [Natrinema gari JCM 14663]
Length = 196
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 64/183 (34%), Positives = 105/183 (57%), Gaps = 3/183 (1%)
Query: 79 KDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNILP 138
+DP++A L+D H P E + + L SI+ QQL+ +A ++ R + G + P
Sbjct: 11 EDPVMAGLLDRH-DPYVEPDWTEYERLCISIINQQLSTASAAAVRERVFEVLEG--AVTP 67
Query: 139 DAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIG 198
++VLA LR+ G+S RK Y+R+ A + + S + + + +LT +KGIG
Sbjct: 68 ESVLAADEAALRDAGLSRRKVEYMRNAARAFQENDYSQAGLASRSNAEVVDLLTEIKGIG 127
Query: 199 AWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSW 258
W+ M+++F L +PDVLP+GDL VR+G++ LY + +M E+ E W+PYRS +
Sbjct: 128 TWTARMYLLFVLERPDVLPLGDLAVRRGIEALYADGDELTRAEMREIAEPWRPYRSAATR 187
Query: 259 YMW 261
Y+W
Sbjct: 188 YIW 190
>gi|261820344|ref|YP_003258450.1| DNA-3-methyladenine glycosylase II [Pectobacterium wasabiae WPP163]
gi|261604357|gb|ACX86843.1| DNA-3-methyladenine glycosylase II [Pectobacterium wasabiae WPP163]
gi|385870518|gb|AFI89038.1| HhH-GPD family protein [Pectobacterium sp. SCC3193]
Length = 220
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 65/170 (38%), Positives = 107/170 (62%), Gaps = 6/170 (3%)
Query: 99 RSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNILP--DAVLAVSPQQLREIGVSY 156
R P+ +L +++ YQQL +A ++ + L D++ P + +LA S LR+ G S
Sbjct: 42 REPYEALMRAVAYQQLTTRAGDAMVAK---LLRVHDDVFPSPEQMLACSTDTLRQCGFSA 98
Query: 157 RKASYLRDLAEKYTDGIL-SDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDV 215
RKA L +A+ G++ S E E DD T+ + LTS+KGIG W+V MF+I+SL + D+
Sbjct: 99 RKADTLHGIAQGALSGLVPSLEQAAERDDDTLIQQLTSLKGIGRWTVEMFLIYSLERTDI 158
Query: 216 LPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSWYMWRLME 265
+P+ DLG+R+GL+ +Y L ++P ++ + + +PYR+V SWY+WR +E
Sbjct: 159 MPLDDLGIRQGLRYVYDLPDMPKPRDLQALSLQCQPYRTVASWYLWRSLE 208
>gi|354599034|ref|ZP_09017051.1| DNA-3-methyladenine glycosylase II [Brenneria sp. EniD312]
gi|353676969|gb|EHD23002.1| DNA-3-methyladenine glycosylase II [Brenneria sp. EniD312]
Length = 243
Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 63/167 (37%), Positives = 102/167 (61%), Gaps = 3/167 (1%)
Query: 99 RSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNILPDA--VLAVSPQQLREIGVSY 156
R P+ +L +++ YQQL KA S+ R + L + P A + S + LR+ G S
Sbjct: 59 REPYEALIRAVAYQQLTAKAGDSMIARLLRLHQYMEQTFPSAAQIAGCSNETLRQCGFSA 118
Query: 157 RKASYLRDLAEKYTDGIL-SDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDV 215
RKA LR +A+ +G + + E + MDD + + L ++KGIG W+V MF+I+SL + D+
Sbjct: 119 RKAETLRAIAQGALNGTVPTLEQALTMDDEILIERLCALKGIGRWTVEMFLIYSLERTDI 178
Query: 216 LPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSWYMWR 262
+P+ DLG+++GL+ +Y L+E P + E+ +PYR+V SWY+WR
Sbjct: 179 MPLDDLGIKQGLRYVYRLRETPTRRALHELSHSCRPYRTVASWYLWR 225
>gi|451849396|gb|EMD62700.1| hypothetical protein COCSADRAFT_93648 [Cochliobolus sativus ND90Pr]
Length = 401
Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 82/209 (39%), Positives = 108/209 (51%), Gaps = 18/209 (8%)
Query: 75 HLRDKDPLLATLIDAHR-----PPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVAL 129
HL DP L TLI+ H P PF +L+ I+ QQ+ +AA SI ++F L
Sbjct: 184 HLVSVDPKLKTLIEKHHCKIFSPEGLREVVDPFTALSSGIIGQQVLPQAAASIRSKFTCL 243
Query: 130 FNGEDNILPD--AVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTM 187
F P VLA+S LR G+S RKA Y+ LAEK+ G LS E +V D +
Sbjct: 244 FPSTHPSFPSPSQVLALSLPTLRTAGLSQRKAEYIHGLAEKFASGELSAEMLVSASDEEL 303
Query: 188 FKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYG-----LKELPGALK- 241
+ L +V+G+G WSV MF F L + DV GDLGV++G+ V G LK G K
Sbjct: 304 IEKLVAVRGLGRWSVEMFACFGLKRMDVFSTGDLGVQRGMAVYAGRDVSKLKNKGGKWKY 363
Query: 242 -----MEEVCEKWKPYRSVGSWYMWRLME 265
M K+ PYRS+ WYMWR+ +
Sbjct: 364 MSEQDMLATAAKFSPYRSLLMWYMWRIAD 392
>gi|241662707|ref|YP_002981067.1| HhH-GPD family protein [Ralstonia pickettii 12D]
gi|240864734|gb|ACS62395.1| HhH-GPD family protein [Ralstonia pickettii 12D]
Length = 290
Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 67/194 (34%), Positives = 112/194 (57%), Gaps = 3/194 (1%)
Query: 72 ALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFN 131
A L +D +L +I + P S PF++LA+SI+ QQ++ KAA+S++ R VA+
Sbjct: 95 ACADLMKRDRILRKIIPTYGPAHLASRGDPFVTLARSIVGQQISVKAAQSVWERVVAVC- 153
Query: 132 GEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKML 191
++P L ++L G+S RKA Y+ DLA+ + +G + EM+D + L
Sbjct: 154 --PKLVPAQFLRAGQERLAGCGLSKRKAEYILDLADHFRNGTVHVAKWAEMEDEDVIAEL 211
Query: 192 TSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKP 251
T ++GIG W+ MF++F+L +P+VLP+ D+G+ + Y E + EV W+P
Sbjct: 212 TQIRGIGRWTAEMFLMFNLMRPNVLPLDDIGLINAISQNYFSGEPVTRSEAREVAANWEP 271
Query: 252 YRSVGSWYMWRLME 265
+R+V +WYMWR ++
Sbjct: 272 WRTVATWYMWRSLD 285
>gi|209518044|ref|ZP_03266875.1| DNA-3-methyladenine glycosylase II [Burkholderia sp. H160]
gi|209501548|gb|EEA01573.1| DNA-3-methyladenine glycosylase II [Burkholderia sp. H160]
Length = 372
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 71/210 (33%), Positives = 117/210 (55%), Gaps = 7/210 (3%)
Query: 56 SPKIFKPLTFKGEVDIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLA 115
+P++ +P + D A L +D +L LI P S PF++LA+S++ QQ++
Sbjct: 164 APEVTRPAYW----DKACADLVKRDRILKKLIPKFGPVHLLSRGDPFVTLARSVVGQQIS 219
Query: 116 YKAAKSIYTRFVALFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILS 175
AA++++ R A ++P + + ++L G+S RKA Y+ DLA+ + G L
Sbjct: 220 VAAAQAVWGRVEAAC---PKLVPQQFIKLGLEKLTACGLSKRKAEYVLDLAQHFVSGALH 276
Query: 176 DESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKE 235
MDD + LT ++GIG W+ MF+IF+L +PDVLP+ DLG+ + + V Y E
Sbjct: 277 VGKWTSMDDEAVIAELTQIRGIGRWTSEMFLIFNLSRPDVLPLDDLGLIRAISVNYFSGE 336
Query: 236 LPGALKMEEVCEKWKPYRSVGSWYMWRLME 265
+ EV W+P+R+V +WYMWR ++
Sbjct: 337 PVTRSEAREVAANWEPWRTVATWYMWRSLD 366
>gi|448334183|ref|ZP_21523362.1| HhH-GPD family protein [Natrinema pellirubrum DSM 15624]
gi|445620340|gb|ELY73842.1| HhH-GPD family protein [Natrinema pellirubrum DSM 15624]
Length = 196
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 66/182 (36%), Positives = 106/182 (58%), Gaps = 3/182 (1%)
Query: 80 DPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNILPD 139
DP++A L+D H P E S + L SI+ QQL+ +A ++ R + +GE + P+
Sbjct: 12 DPVMAGLLDRH-DPYVEPDWSEYERLCISIINQQLSTASAAAVRERVFEVLDGE--VTPE 68
Query: 140 AVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIGA 199
+VLA + +R+ G+ RK Y+R+ A + + S + D + +LT + GIG
Sbjct: 69 SVLAADDEAIRDAGLFRRKIEYVRNAARAFRENDYSRTGLASHSDGEVVDLLTEITGIGE 128
Query: 200 WSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSWY 259
W+ M+++F L +PDVLP+GDL VR+G++ LY E +M E+ E W+PYRSV + Y
Sbjct: 129 WTARMYLLFVLERPDVLPLGDLAVRRGIEQLYADGEELTRAEMREIAEPWRPYRSVATRY 188
Query: 260 MW 261
+W
Sbjct: 189 IW 190
>gi|398844665|ref|ZP_10601723.1| HhH-GPD superfamily base excision DNA repair protein [Pseudomonas
sp. GM84]
gi|398254364|gb|EJN39463.1| HhH-GPD superfamily base excision DNA repair protein [Pseudomonas
sp. GM84]
Length = 204
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 63/171 (36%), Positives = 105/171 (61%), Gaps = 1/171 (0%)
Query: 98 SRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNILPDAVLAVSPQQLREIGVSYR 157
+R P+ +L ++I YQQL KA +I RF+AL+ G P+ +LA + G S
Sbjct: 34 AREPYEALIRAIAYQQLHVKAGDAIVARFLALYPGLAFPAPEQLLATDADLQKACGFSAN 93
Query: 158 KASYLRDLAEKYTDGIL-SDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVL 216
K + +R +A+ D ++ + M D + + L S++G+G W+V MF+I+SL + D+L
Sbjct: 94 KLATIRAIAQARLDDVVPTLAEARSMSDAELIERLVSLRGVGRWTVEMFLIYSLERTDIL 153
Query: 217 PVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSWYMWRLMEAK 267
PV DLGVR+G + L GL++ P +M E+ E+W PYR+ +WY+WR+ +++
Sbjct: 154 PVDDLGVREGYRRLKGLEKAPKPRQMREIGERWSPYRTTAAWYLWRVPQSR 204
>gi|374309131|ref|YP_005055561.1| HhH-GPD family protein [Granulicella mallensis MP5ACTX8]
gi|358751141|gb|AEU34531.1| HhH-GPD family protein [Granulicella mallensis MP5ACTX8]
Length = 238
Score = 134 bits (338), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 89/212 (41%), Positives = 114/212 (53%), Gaps = 19/212 (8%)
Query: 80 DPLLATLIDAHRPPTFE--SSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNI- 136
DP LA LI P T + +SPF +L +SI+YQQL KAA +I+ R +A F I
Sbjct: 27 DPKLAKLIAKAGPFTVRLPAQQSPFEALTQSIIYQQLHGKAAATIHARLLASFADACGIG 86
Query: 137 ---LPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGIL-SDESIVEMDDVTMFKMLT 192
P +L +QLR G+S+ KA LRDLA K DG + + I M D + + LT
Sbjct: 87 NHPEPQDLLDCPNEQLRAAGLSHNKALALRDLAAKTLDGTVPTIARIRRMSDDDIIEHLT 146
Query: 193 SVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLY-GLKE----LPGALKMEEV-- 245
V+GIG W+V M +IF L +P+VLP D G+RKG + Y GLK P L E
Sbjct: 147 QVRGIGKWTVEMMLIFRLGRPNVLPSSDYGIRKGFALTYLGLKPTEKVTPDLLATHEQIA 206
Query: 246 --CEKWKPYRSVGSWYMWR---LMEAKGVLPN 272
+KW P+ SV SWYMWR L K V P
Sbjct: 207 KRAKKWAPWCSVASWYMWRACDLAAGKTVQPE 238
>gi|448304826|ref|ZP_21494762.1| HhH-GPD family protein [Natronorubrum sulfidifaciens JCM 14089]
gi|445590207|gb|ELY44428.1| HhH-GPD family protein [Natronorubrum sulfidifaciens JCM 14089]
Length = 201
Score = 134 bits (338), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 65/187 (34%), Positives = 108/187 (57%), Gaps = 2/187 (1%)
Query: 80 DPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNILPD 139
DP++A +ID P + + + L SI+ QQL+ +A ++ R + GE + P+
Sbjct: 17 DPVMAAVIDRREPHPLDPNPDEYERLCVSIINQQLSTASAAAVRERVFDVLGGE--VTPE 74
Query: 140 AVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIGA 199
AVLA S LR+ G+S K Y+ + A + + L+ E + + + + + LT +KG+G
Sbjct: 75 AVLAASRDDLRDAGLSRTKVDYVENAARAFQERDLTREGLADHTNEDVRRELTRIKGVGD 134
Query: 200 WSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSWY 259
W+ M+++F L +PDVLP+GDL VR+G++ LY E +M + + W+PYRS+ S Y
Sbjct: 135 WTARMYLMFVLQRPDVLPLGDLAVRRGIEHLYNDGEALSRAEMRAIADPWRPYRSLASRY 194
Query: 260 MWRLMEA 266
+W EA
Sbjct: 195 IWAEYEA 201
>gi|17545887|ref|NP_519289.1| hypothetical protein RSc1168 [Ralstonia solanacearum GMI1000]
gi|17428182|emb|CAD14870.1| putative dna glycosylase protein [Ralstonia solanacearum GMI1000]
Length = 291
Score = 134 bits (338), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 68/194 (35%), Positives = 111/194 (57%), Gaps = 3/194 (1%)
Query: 72 ALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFN 131
A L +D +L +I A P S PF++LA+SI+ QQ++ KAA+S++ R V
Sbjct: 96 ACADLMKRDRILRKIIPAFGPAHLASRGDPFVTLARSIVGQQISVKAAQSVWERLV---E 152
Query: 132 GEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKML 191
++P L ++L G+S RKA Y+ DLAE + +G++ EM+D + L
Sbjct: 153 ACPKLVPAQFLRAGHEKLAGCGLSKRKAEYILDLAEHFRNGMVHVAKWAEMEDEDVIAEL 212
Query: 192 TSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKP 251
T ++GIG W+ MF++F+L +P+VLP+ D+G+ + Y E + EV W+P
Sbjct: 213 TQIRGIGRWTAEMFLMFNLLRPNVLPLDDIGLINAISQNYFSGEPVTRSEAREVAANWEP 272
Query: 252 YRSVGSWYMWRLME 265
+R+V +WYMWR ++
Sbjct: 273 WRTVATWYMWRSLD 286
>gi|194289324|ref|YP_002005231.1| DNA-3-methyladenine glycosylase ii [Cupriavidus taiwanensis LMG
19424]
gi|193223159|emb|CAQ69164.1| putative DNA-3-methyladenine glycosylase II [Cupriavidus
taiwanensis LMG 19424]
Length = 287
Score = 134 bits (338), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 68/196 (34%), Positives = 110/196 (56%), Gaps = 3/196 (1%)
Query: 70 DIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVAL 129
D A L +D +L +I + P S PF++LA++++ QQ++ KAA+S++ R A+
Sbjct: 89 DEACADLMKRDRILRKMIPTYGPAHLVSRGDPFVTLARAVVGQQISVKAAQSVWERLHAV 148
Query: 130 FNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFK 189
+ P L P++L GVS RKA YL DLA + G + +MDD +
Sbjct: 149 C---PRLAPAQFLRAGPEKLAGCGVSKRKAEYLIDLAAHFKAGTVHVAQWAQMDDEAVIA 205
Query: 190 MLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKW 249
LT ++GIG W+ MF++F+L +P+VLP+ D+G+ + Y E + EV W
Sbjct: 206 ELTQIRGIGRWTAEMFLMFNLMRPNVLPLDDVGLINAISANYFSGEPVTRSEAREVAANW 265
Query: 250 KPYRSVGSWYMWRLME 265
+P+R+V +WYMWR ++
Sbjct: 266 EPWRTVATWYMWRSLD 281
>gi|339325370|ref|YP_004685063.1| DNA-3-methyladenine glycosylase 1 [Cupriavidus necator N-1]
gi|338165527|gb|AEI76582.1| DNA-3-methyladenine glycosylase 1 [Cupriavidus necator N-1]
Length = 279
Score = 134 bits (338), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 74/240 (30%), Positives = 122/240 (50%), Gaps = 15/240 (6%)
Query: 26 RKIRKLTTITPITKIAEIPVATAISTNSDNSPKIFKPLTFKGEVDIALRHLRDKDPLLAT 85
R R + P +PV T I +P + D A L +D +L
Sbjct: 49 RGTRNAKAVLPEADAVPLPVETVIDA--------VRPAYW----DEACADLMKRDRILRK 96
Query: 86 LIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNILPDAVLAVS 145
+I + P S PF++LA++++ QQ++ KAA+S++ R L + P L
Sbjct: 97 MIPTYGPAHLVSRGDPFVTLARAVVGQQISVKAAQSVWERLHTLC---PKLTPAQFLRAG 153
Query: 146 PQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIGAWSVHMF 205
P++L G+S RK YL DLA+ + G++ +MDD + LT ++GIG W+ MF
Sbjct: 154 PEKLAGCGLSKRKGEYLIDLADHFKAGMVHVAEWAQMDDEAVIAELTQIRGIGRWTAEMF 213
Query: 206 MIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSWYMWRLME 265
++F+L +P+VLP+ D+G+ + Y E + EV W+P+R+V +WYMWR ++
Sbjct: 214 LMFNLMRPNVLPLDDIGLINAISANYFSGEPVTRSEAREVAANWEPWRTVATWYMWRSLD 273
>gi|350561583|ref|ZP_08930421.1| HhH-GPD family protein [Thioalkalivibrio thiocyanoxidans ARh 4]
gi|349780615|gb|EGZ34933.1| HhH-GPD family protein [Thioalkalivibrio thiocyanoxidans ARh 4]
Length = 206
Score = 134 bits (338), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 70/199 (35%), Positives = 111/199 (55%), Gaps = 3/199 (1%)
Query: 72 ALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFN 131
A L DP++A LI + + PF +LA++I+ QQ++ KAA S++ RF A
Sbjct: 10 ACADLAGTDPVMAALIARYPDAVLTTRGDPFQTLARAIVGQQISVKAADSVWQRFAAFVG 69
Query: 132 GEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKML 191
++ P+ ++ + + L G+S RKA YLRDLA + DG + M D + L
Sbjct: 70 ---SVRPEQIVVLELESLAACGLSRRKAEYLRDLAGHFVDGRIQPARWESMTDEAVIAEL 126
Query: 192 TSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKP 251
V+GIG W+ MF+IF+L +PDV PV D+G++K + + Y E P + E+ P
Sbjct: 127 VDVRGIGRWTAEMFLIFNLLRPDVWPVDDIGLQKAVALHYLDNERPTPRTLRRHGERHAP 186
Query: 252 YRSVGSWYMWRLMEAKGVL 270
+R+V +WY+WR ++ VL
Sbjct: 187 WRTVATWYLWRSLDPTVVL 205
>gi|386333864|ref|YP_006030035.1| DNA-3-methyladenine glycosylase protein [Ralstonia solanacearum
Po82]
gi|334196314|gb|AEG69499.1| DNA-3-methyladenine glycosylase protein [Ralstonia solanacearum
Po82]
Length = 300
Score = 134 bits (338), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 68/194 (35%), Positives = 110/194 (56%), Gaps = 3/194 (1%)
Query: 72 ALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFN 131
A L +D +L +I A P S PF++LA+SI+ QQ++ KAA+S++ R V
Sbjct: 105 ACADLMKRDRILRKIIPAFGPAHLASRGDPFVTLARSIVGQQISVKAAQSVWERLV---E 161
Query: 132 GEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKML 191
++P L ++L G+S RKA Y+ DLAE + +G + EM+D + L
Sbjct: 162 ACPKLVPAQFLRAGHEKLASCGLSKRKAEYILDLAEHFRNGTVHVAKWAEMEDEDVIAEL 221
Query: 192 TSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKP 251
T ++GIG W+ MF++F+L +P+VLP+ D+G+ + Y E + EV W+P
Sbjct: 222 TQIRGIGRWTAEMFLMFNLLRPNVLPLDDIGLINAISQNYFSGEPVTRSEAREVAANWEP 281
Query: 252 YRSVGSWYMWRLME 265
+R+V +WYMWR ++
Sbjct: 282 WRTVATWYMWRSLD 295
>gi|207743490|ref|YP_002259882.1| dna glycosylase protein [Ralstonia solanacearum IPO1609]
gi|421896924|ref|ZP_16327319.1| dna glycosylase protein [Ralstonia solanacearum MolK2]
gi|206588089|emb|CAQ18669.1| dna glycosylase protein [Ralstonia solanacearum MolK2]
gi|206594888|emb|CAQ61815.1| dna glycosylase protein [Ralstonia solanacearum IPO1609]
Length = 300
Score = 134 bits (338), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 68/194 (35%), Positives = 110/194 (56%), Gaps = 3/194 (1%)
Query: 72 ALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFN 131
A L +D +L +I A P S PF++LA+SI+ QQ++ KAA+S++ R V
Sbjct: 105 ACADLMKRDRILRKIIPAFGPAHLASRGDPFVTLARSIVGQQISVKAAQSVWERLV---E 161
Query: 132 GEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKML 191
++P L ++L G+S RKA Y+ DLAE + +G + EM+D + L
Sbjct: 162 ACPKLVPAQFLRAGHEKLASCGLSKRKAEYILDLAEHFRNGTVHVAKWAEMEDEDVIAEL 221
Query: 192 TSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKP 251
T ++GIG W+ MF++F+L +P+VLP+ D+G+ + Y E + EV W+P
Sbjct: 222 TQIRGIGRWTAEMFLMFNLLRPNVLPLDDIGLINAISQNYFSGEPVTRSEAREVAANWEP 281
Query: 252 YRSVGSWYMWRLME 265
+R+V +WYMWR ++
Sbjct: 282 WRTVATWYMWRSLD 295
>gi|448578484|ref|ZP_21643919.1| DNA-3-methyladenine glycosylase [Haloferax larsenii JCM 13917]
gi|445727025|gb|ELZ78641.1| DNA-3-methyladenine glycosylase [Haloferax larsenii JCM 13917]
Length = 194
Score = 134 bits (337), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 76/198 (38%), Positives = 119/198 (60%), Gaps = 9/198 (4%)
Query: 70 DIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVAL 129
D A R LR D L +++ H P + + + PF L SI+ QQL+ AA +I R L
Sbjct: 3 DDAYRELR-ADTHLGDVVETHGPLSLDPAADPFERLVVSIVNQQLSTTAAATIRDR---L 58
Query: 130 FNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFK 189
F+ + + P +LA LR+ G+S +K Y+R++AE + +G LS +S+ MDD +
Sbjct: 59 FDRVE-VTPAGLLAAEESVLRDCGLSGQKVGYVRNVAEAFQNG-LSADSLRTMDDDEVID 116
Query: 190 MLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLK--ELPGALKMEEVCE 247
LT ++G+G W+ MF+IF L + DV PV DLG+R+G++ ++ ++ LP A +M E E
Sbjct: 117 ALTEIRGVGVWTAKMFLIFVLAREDVFPVEDLGIRRGMEHVFDVEADALPRA-EMVERAE 175
Query: 248 KWKPYRSVGSWYMWRLME 265
W PYRS S Y+WR+++
Sbjct: 176 SWAPYRSYASLYLWRVVD 193
>gi|289582766|ref|YP_003481232.1| HhH-GPD family protein [Natrialba magadii ATCC 43099]
gi|448281807|ref|ZP_21473100.1| HhH-GPD family protein [Natrialba magadii ATCC 43099]
gi|289532319|gb|ADD06670.1| HhH-GPD family protein [Natrialba magadii ATCC 43099]
gi|445577436|gb|ELY31869.1| HhH-GPD family protein [Natrialba magadii ATCC 43099]
Length = 209
Score = 134 bits (337), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 65/188 (34%), Positives = 108/188 (57%), Gaps = 3/188 (1%)
Query: 79 KDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNILP 138
+DP++ L+D H P E + + L SI+ QQL+ +A ++ R + ED + P
Sbjct: 11 EDPVMDRLVDTH-DPYVEPDWTEYERLCISIINQQLSTASAAAVRERVFDVL--EDEVTP 67
Query: 139 DAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIG 198
+ VLA Q LR+ G+S K Y+R+ A + + + + +D+ + LT +KGIG
Sbjct: 68 ETVLAADDQALRDAGLSRSKVDYIRNAAHAFQEQDFTRAGLAGVDNDEVVDRLTDIKGIG 127
Query: 199 AWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSW 258
W+ M+++F L +PD+LP+GDL VR+G++ LY + +M ++ E W+PYRSV +
Sbjct: 128 EWTARMYLLFVLERPDILPLGDLAVRRGIEQLYSNGDELTRAEMRDIAEDWRPYRSVATR 187
Query: 259 YMWRLMEA 266
Y+W EA
Sbjct: 188 YIWAEYEA 195
>gi|83748222|ref|ZP_00945248.1| DNA-3-methyladenine glycosylase II [Ralstonia solanacearum UW551]
gi|83725063|gb|EAP72215.1| DNA-3-methyladenine glycosylase II [Ralstonia solanacearum UW551]
Length = 296
Score = 134 bits (337), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 68/194 (35%), Positives = 110/194 (56%), Gaps = 3/194 (1%)
Query: 72 ALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFN 131
A L +D +L +I A P S PF++LA+SI+ QQ++ KAA+S++ R V
Sbjct: 101 ACADLMKRDRILRKIIPAFGPAHLASRGDPFVTLARSIVGQQISVKAAQSVWERLV---E 157
Query: 132 GEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKML 191
++P L ++L G+S RKA Y+ DLAE + +G + EM+D + L
Sbjct: 158 ACPKLVPAQFLRAGHEKLASCGLSKRKAEYILDLAEHFRNGTVHVAKWAEMEDEDVIAEL 217
Query: 192 TSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKP 251
T ++GIG W+ MF++F+L +P+VLP+ D+G+ + Y E + EV W+P
Sbjct: 218 TQIRGIGRWTAEMFLMFNLLRPNVLPLDDIGLINAISQNYFSGEPVTRSEAREVAANWEP 277
Query: 252 YRSVGSWYMWRLME 265
+R+V +WYMWR ++
Sbjct: 278 WRTVATWYMWRSLD 291
>gi|309781264|ref|ZP_07676001.1| base excision DNA repair protein, HhH-GPD family [Ralstonia sp.
5_7_47FAA]
gi|308920085|gb|EFP65745.1| base excision DNA repair protein, HhH-GPD family [Ralstonia sp.
5_7_47FAA]
Length = 294
Score = 134 bits (337), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 67/194 (34%), Positives = 111/194 (57%), Gaps = 3/194 (1%)
Query: 72 ALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFN 131
A L +D +L +I P S PF++LA+SI+ QQ++ KAA+S++ R VA+
Sbjct: 99 ACADLMKRDRILRKIIPTCGPAHLASRGDPFVTLARSIVGQQISVKAAQSVWERVVAVC- 157
Query: 132 GEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKML 191
++P L ++L G+S RKA Y+ DLA+ + +G + EM+D + L
Sbjct: 158 --PKLVPAQFLRAGQEKLAGCGLSKRKAEYILDLADHFRNGTVHVAKWAEMEDQDVIAEL 215
Query: 192 TSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKP 251
T ++GIG W+ MF++F+L +P+VLP+ D+G+ + Y E + EV W+P
Sbjct: 216 TQIRGIGRWTAEMFLMFNLMRPNVLPLDDIGLINAISQNYFSGEPVTRSEAREVAANWEP 275
Query: 252 YRSVGSWYMWRLME 265
+R+V +WYMWR ++
Sbjct: 276 WRTVATWYMWRSLD 289
>gi|423094884|ref|ZP_17082680.1| DNA-3-methyladenine glycosylase [Pseudomonas fluorescens Q2-87]
gi|397888998|gb|EJL05481.1| DNA-3-methyladenine glycosylase [Pseudomonas fluorescens Q2-87]
Length = 204
Score = 134 bits (337), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 64/167 (38%), Positives = 102/167 (61%), Gaps = 1/167 (0%)
Query: 98 SRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNILPDAVLAVSPQQLREIGVSYR 157
SR P+ +L ++I YQQL +A +I R +AL+ P+ +LA Q+R G S
Sbjct: 36 SREPYEALVRAIAYQQLHARAGDAILGRLLALYPALTFPRPEQLLATDIAQMRGCGFSAS 95
Query: 158 KASYLRDLAEKYTDGILSD-ESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVL 216
K + L +A+ DG++ D + + MDD + + LT ++G+G W+V M +I+SL +PD+L
Sbjct: 96 KITTLHGIAQAALDGLVPDYATALVMDDEALIERLTMLRGVGRWTVEMLLIYSLERPDIL 155
Query: 217 PVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSWYMWRL 263
P D GVR+G + L GL++ P +M E+ W PYR+V +WY+WR+
Sbjct: 156 PADDFGVREGYRRLKGLEQQPSRKQMIEIGLAWSPYRTVAAWYLWRV 202
>gi|300691853|ref|YP_003752848.1| DNA-3-methyladenine glycosylase II [Ralstonia solanacearum PSI07]
gi|299078913|emb|CBJ51574.1| putative DNA-3-methyladenine glycosylase II [Ralstonia solanacearum
PSI07]
Length = 300
Score = 134 bits (337), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 68/194 (35%), Positives = 110/194 (56%), Gaps = 3/194 (1%)
Query: 72 ALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFN 131
A L +D +L +I A P S PF++LA+SI+ QQ++ KAA+S++ R V
Sbjct: 105 ACADLMKRDRILRKIIPAFGPAHLASRGDPFVTLARSIVGQQISVKAAQSVWERLV---E 161
Query: 132 GEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKML 191
++P L ++L G+S RKA Y+ DLAE + +G + EM+D + L
Sbjct: 162 ACPKLVPAQFLRAGHEKLAGCGLSKRKAEYILDLAEHFRNGTVHVAKWAEMEDEDVIAEL 221
Query: 192 TSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKP 251
T ++GIG W+ MF++F+L +P+VLP+ D+G+ + Y E + EV W+P
Sbjct: 222 TQIRGIGRWTAEMFLMFNLLRPNVLPLDDIGLINAISQNYFSGEPVTRSEAREVAANWEP 281
Query: 252 YRSVGSWYMWRLME 265
+R+V +WYMWR ++
Sbjct: 282 WRTVATWYMWRSLD 295
>gi|448345063|ref|ZP_21533964.1| HhH-GPD family protein [Natrinema altunense JCM 12890]
gi|445636613|gb|ELY89774.1| HhH-GPD family protein [Natrinema altunense JCM 12890]
Length = 196
Score = 134 bits (337), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 69/184 (37%), Positives = 108/184 (58%), Gaps = 5/184 (2%)
Query: 79 KDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNILP 138
+DP++A L+D H P E S + L SI+ QQL+ +A ++ R + G + P
Sbjct: 11 EDPVMAGLLDRH-DPYVEPDWSEYERLCISIINQQLSTASAAAVRERVFEVLEG--AVTP 67
Query: 139 DAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIG 198
++VLA LR+ G+S RK Y+R+ A + + + + D + +LT +KGIG
Sbjct: 68 ESVLAADEAALRDAGLSGRKVEYVRNAARAFQENDYTRAGLAGHSDAAVVDLLTEIKGIG 127
Query: 199 AWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLY-GLKELPGALKMEEVCEKWKPYRSVGS 257
W+ M+++F L +PDVLP+GDL VR+G++ LY G EL A +M E+ E W+PYRS +
Sbjct: 128 EWTARMYLLFVLERPDVLPLGDLAVRRGIEELYAGGDELTRA-EMREIAEPWQPYRSAAT 186
Query: 258 WYMW 261
Y+W
Sbjct: 187 RYIW 190
>gi|404393824|ref|ZP_10985628.1| hypothetical protein HMPREF0989_01720 [Ralstonia sp. 5_2_56FAA]
gi|348615634|gb|EGY65145.1| hypothetical protein HMPREF0989_01720 [Ralstonia sp. 5_2_56FAA]
Length = 290
Score = 134 bits (337), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 67/194 (34%), Positives = 111/194 (57%), Gaps = 3/194 (1%)
Query: 72 ALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFN 131
A L +D +L +I P S PF++LA+SI+ QQ++ KAA+S++ R VA+
Sbjct: 95 ACADLMKRDRILRKIIPTCGPAHLASRGDPFVTLARSIVGQQISVKAAQSVWERVVAVC- 153
Query: 132 GEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKML 191
++P L ++L G+S RKA Y+ DLA+ + +G + EM+D + L
Sbjct: 154 --PKLVPAQFLRAGQEKLAGCGLSKRKAEYILDLADHFRNGTVHVAKWAEMEDQDVIAEL 211
Query: 192 TSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKP 251
T ++GIG W+ MF++F+L +P+VLP+ D+G+ + Y E + EV W+P
Sbjct: 212 TQIRGIGRWTAEMFLMFNLMRPNVLPLDDIGLINAISQNYFSGEPVTRSEAREVAANWEP 271
Query: 252 YRSVGSWYMWRLME 265
+R+V +WYMWR ++
Sbjct: 272 WRTVATWYMWRSLD 285
>gi|262277717|ref|ZP_06055510.1| DNA-3-methyladenine glycosylase I [alpha proteobacterium HIMB114]
gi|262224820|gb|EEY75279.1| DNA-3-methyladenine glycosylase I [alpha proteobacterium HIMB114]
Length = 205
Score = 134 bits (337), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 68/200 (34%), Positives = 116/200 (58%), Gaps = 4/200 (2%)
Query: 70 DIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVAL 129
D ++L KD +L LI ++ ++ PF SL KSI+ QQ++ +AA S++ + L
Sbjct: 8 DQGKKYLSKKDKILGKLIKKYKG-NLKTRSDPFFSLCKSIVGQQISVQAASSVWKK---L 63
Query: 130 FNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFK 189
I P + ++P+QL G+S +K SYL+ LA+K+ + L + + +M+D K
Sbjct: 64 ETKAKKIHPKNIYKLTPKQLASCGLSRQKISYLKILAKKFLNKELDIKKLKKMNDQDAIK 123
Query: 190 MLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKW 249
L VKGIG W+ MF+ F+ +PD+ PV D+G+ +G+ Y K P ++++ E+W
Sbjct: 124 YLVQVKGIGVWTAEMFLFFNQMRPDIFPVQDIGLLRGISNNYKTKYPPSPSQLKKFKERW 183
Query: 250 KPYRSVGSWYMWRLMEAKGV 269
PY +V +WY+WR ++ + V
Sbjct: 184 SPYCTVATWYLWRSIDPEPV 203
>gi|398856987|ref|ZP_10612697.1| HhH-GPD superfamily base excision DNA repair protein [Pseudomonas
sp. GM79]
gi|398241955|gb|EJN27590.1| HhH-GPD superfamily base excision DNA repair protein [Pseudomonas
sp. GM79]
Length = 205
Score = 134 bits (337), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 68/191 (35%), Positives = 111/191 (58%), Gaps = 10/191 (5%)
Query: 74 RHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGE 133
RH+ P L H+P ++R P+ SL ++I YQQL KA +I R ++LF
Sbjct: 21 RHISAIGPCL------HQP---HAARDPYESLVRAIAYQQLHAKAGDAIVGRLLSLFPSI 71
Query: 134 DNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSD-ESIVEMDDVTMFKMLT 192
P+ +LA +Q+R G S K + ++ +A+ DG++ D + + MDD + + L
Sbjct: 72 TFPRPEQILATDFEQMRGCGFSASKIATIQGIAQAALDGVVPDYATALAMDDEALIERLI 131
Query: 193 SVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPY 252
+++G+G W+V M +I+SL +PD+LP D GVR+G + L GL+ P +M E+ W PY
Sbjct: 132 TLRGVGRWTVEMLLIYSLERPDILPADDFGVREGYRRLKGLEIQPTRKQMIEIGMAWSPY 191
Query: 253 RSVGSWYMWRL 263
R+ +WY+WR+
Sbjct: 192 RTAAAWYLWRV 202
>gi|332530125|ref|ZP_08406074.1| HhH-GPD [Hylemonella gracilis ATCC 19624]
gi|332040395|gb|EGI76772.1| HhH-GPD [Hylemonella gracilis ATCC 19624]
Length = 243
Score = 134 bits (337), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 70/196 (35%), Positives = 106/196 (54%), Gaps = 3/196 (1%)
Query: 70 DIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVAL 129
D A +HL KD ++ +I H E+ F++LA+SI+ QQ++ KAA+S++ RF AL
Sbjct: 45 DEACKHLMKKDRVMNRIIPQHGGACLETRGDAFVTLARSIVGQQISVKAAQSVWERFAAL 104
Query: 130 FNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFK 189
+ P VL + +R G+S RK YL DLA + G + MDD +
Sbjct: 105 ---PRRMTPGNVLKLKVDDMRAAGLSARKVEYLVDLALHFDSGAIRVADWKAMDDEAIIA 161
Query: 190 MLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKW 249
L ++GIG W+ MF+IF L +P+VLP+ D+G+ G+ Y E EV W
Sbjct: 162 ELVGIRGIGRWTAEMFLIFHLMRPNVLPLDDIGLLNGISRNYFSGEAVSRSDAREVAAAW 221
Query: 250 KPYRSVGSWYMWRLME 265
P+ SV +WY+WR ++
Sbjct: 222 APFCSVATWYIWRSLD 237
>gi|430811413|emb|CCJ31164.1| unnamed protein product [Pneumocystis jirovecii]
Length = 287
Score = 134 bits (337), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 83/251 (33%), Positives = 125/251 (49%), Gaps = 38/251 (15%)
Query: 49 ISTNSDNSPKIFKPL---TFKGEVDIALRHLRDKDPLLATLIDAH-----RPPTFESSRS 100
I N+ +S KP+ T+ + AL HL+ D L + P +
Sbjct: 31 IQWNTSDSNVFLKPIFSETYLTLLSKALDHLKKVDSRFQVLSERFPCKPFSPEGLMEPVN 90
Query: 101 PFLSLAKSILYQQLAYKAAKSIYTRFVALF---------NGEDNI------------LPD 139
PF SL ++IL QQL+ A+ S+Y +F+ LF N E+ +P
Sbjct: 91 PFQSLCRAILSQQLSNSASASVYRKFIKLFFPDETKQPQNRENKSSDSQASEAKIFPMPQ 150
Query: 140 AVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIGA 199
V +SP+ LR G S++K Y++ LA + G LS E D + + LT++KGIG
Sbjct: 151 TVRDMSPENLRLAGCSFKKIEYIKSLANNFLSGDLSAEFFSNTSDEGIMQRLTTIKGIGP 210
Query: 200 WSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGL---KELPGALK------MEEVCEKWK 250
WS MF++FSL + D+L GDLG+++G+ ++ G K G K M E+ E W+
Sbjct: 211 WSAEMFLLFSLKRTDILSTGDLGIQRGMALMKGKNISKPNKGKWKYMSYEEMIEMAEPWR 270
Query: 251 PYRSVGSWYMW 261
PYRS+ SW+MW
Sbjct: 271 PYRSIASWFMW 281
>gi|412339531|ref|YP_006968286.1| DNA-3-methyladenine glycosylase 1 [Bordetella bronchiseptica 253]
gi|408769365|emb|CCJ54141.1| DNA-3-methyladenine glycosylase 1 [Bordetella bronchiseptica 253]
Length = 219
Score = 134 bits (337), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 67/191 (35%), Positives = 104/191 (54%), Gaps = 10/191 (5%)
Query: 74 RHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGE 133
RH+ P L HRP +R P+ +L ++I YQQL +A +I R +ALF G
Sbjct: 27 RHVAATGPCL------HRP---LPAREPYEALVRAIAYQQLHARAGDAIVGRLLALFPGG 77
Query: 134 DNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVE-MDDVTMFKMLT 192
P +LA P LR G S K + +A+ DG++ D M D + + LT
Sbjct: 78 AFPAPGQLLAADPAALRACGFSAAKTQTILGIAQAARDGVVPDRRAARRMSDQALVERLT 137
Query: 193 SVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPY 252
+++G+G W+V M +I++L + D+LP D GVR G + L G P A +M ++ + W PY
Sbjct: 138 TLRGVGRWTVEMLLIYTLARADILPADDFGVRDGYRRLKGGAATPTARQMRDIGQAWGPY 197
Query: 253 RSVGSWYMWRL 263
R++ +WY+WR+
Sbjct: 198 RTLAAWYLWRV 208
>gi|448358499|ref|ZP_21547180.1| HhH-GPD family protein [Natrialba chahannaoensis JCM 10990]
gi|445645852|gb|ELY98847.1| HhH-GPD family protein [Natrialba chahannaoensis JCM 10990]
Length = 209
Score = 134 bits (337), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 66/187 (35%), Positives = 107/187 (57%), Gaps = 3/187 (1%)
Query: 80 DPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNILPD 139
DP++ L+DAH P E + + L SI+ QQL+ +A ++ R + ED + P
Sbjct: 12 DPIMDRLVDAHNP-YVEPDWTEYERLCISIINQQLSTASAAAVRERVFDVL--EDEVTPK 68
Query: 140 AVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIGA 199
VLA Q LR+ G+S K Y+R+ A + + + + +D+ + LT +KGIG
Sbjct: 69 TVLAADDQALRDAGLSRSKIEYIRNAARAFQEEDFTRTGLSGVDNDEVVDRLTEIKGIGE 128
Query: 200 WSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSWY 259
W+ M+ +F L +PD+LP+GDL VR+G++ LYG + +M ++ + W+PYRSV + Y
Sbjct: 129 WTARMYCLFVLKRPDILPLGDLAVRRGIEQLYGNGDELTRAEMRDIADSWRPYRSVATRY 188
Query: 260 MWRLMEA 266
+W EA
Sbjct: 189 IWAEYEA 195
>gi|320108054|ref|YP_004183644.1| HhH-GPD family protein [Terriglobus saanensis SP1PR4]
gi|319926575|gb|ADV83650.1| HhH-GPD family protein [Terriglobus saanensis SP1PR4]
Length = 224
Score = 134 bits (337), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 67/170 (39%), Positives = 102/170 (60%), Gaps = 7/170 (4%)
Query: 98 SRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNILPDAVLAVSPQQLREIGVSYR 157
+R P+ +L ++I YQQL KA +I T+F ALF G + P+ +LA LR G S R
Sbjct: 50 AREPYEALIRAIAYQQLHAKAGDAILTKFTALFGGSNFPSPNQILAADFDSLRACGFSGR 109
Query: 158 KASYLRDLAEKYTDGILSDESIVE-MDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVL 216
K +R++A G++ D + M D + L ++KGIG W+V MF+I++L + DVL
Sbjct: 110 KIETIREIASGSLSGLVPDRKDADKMSDEDLISRLVALKGIGRWTVEMFLIYTLERMDVL 169
Query: 217 PVGDLGVRKGLQVLYGLKELPGALKMEEVC---EKWKPYRSVGSWYMWRL 263
P D GVR+G + L K LP AL +E+ ++W PYR++ +WY+WR+
Sbjct: 170 PADDFGVREGHRRL---KSLPKALSAKEITREGQRWSPYRTIAAWYLWRV 216
>gi|344174362|emb|CCA86153.1| putative DNA-3-methyladenine glycosylase II [Ralstonia syzygii R24]
Length = 299
Score = 134 bits (336), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 68/194 (35%), Positives = 110/194 (56%), Gaps = 3/194 (1%)
Query: 72 ALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFN 131
A L +D +L +I A P S PF++LA+SI+ QQ++ KAA+S++ R V
Sbjct: 104 ACADLMKRDRILRKIIPAFGPAHLASRGDPFVTLARSIVGQQISVKAAQSVWERLV---E 160
Query: 132 GEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKML 191
++P L ++L G+S RKA Y+ DLAE + +G + EM+D + L
Sbjct: 161 ACPKLVPAQFLRAGHEKLAGCGLSKRKAEYILDLAEHFRNGTVHVAKWAEMEDEDVIAEL 220
Query: 192 TSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKP 251
T ++GIG W+ MF++F+L +P+VLP+ D+G+ + Y E + EV W+P
Sbjct: 221 TQIRGIGRWTAEMFLMFNLLRPNVLPLDDIGLINAISQNYFSGEPVTRSEAREVAANWEP 280
Query: 252 YRSVGSWYMWRLME 265
+R+V +WYMWR ++
Sbjct: 281 WRTVATWYMWRSLD 294
>gi|73540825|ref|YP_295345.1| HhH-GPD [Ralstonia eutropha JMP134]
gi|72118238|gb|AAZ60501.1| HhH-GPD [Ralstonia eutropha JMP134]
Length = 256
Score = 134 bits (336), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 67/196 (34%), Positives = 109/196 (55%), Gaps = 3/196 (1%)
Query: 70 DIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVAL 129
D A L +D +L +I + P S PF++LA+S++ QQ++ KAA+S++ R V
Sbjct: 58 DEACADLMKRDRILRKMIPTYGPAHLVSRGDPFITLARSVVGQQISVKAAQSVWERLVGA 117
Query: 130 FNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFK 189
+ P L P++L G+S RKA Y+ DLA+ + G + MDD +
Sbjct: 118 C---PKLTPAQFLRAGPEKLAACGLSRRKAEYITDLADHFKAGRVHVNEWAVMDDEAVIA 174
Query: 190 MLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKW 249
LT ++GIG W+ MF++F+L +P+VLP+ D+G+ + Y E + EV W
Sbjct: 175 ELTQIRGIGRWTAEMFLMFNLMRPNVLPLDDIGLINAISANYFSGEPVTRSEAREVAANW 234
Query: 250 KPYRSVGSWYMWRLME 265
+P+R+V +WYMWR ++
Sbjct: 235 EPWRTVATWYMWRSLD 250
>gi|218437133|ref|YP_002375462.1| HhH-GPD family protein [Cyanothece sp. PCC 7424]
gi|218169861|gb|ACK68594.1| HhH-GPD family protein [Cyanothece sp. PCC 7424]
Length = 210
Score = 134 bits (336), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 68/194 (35%), Positives = 110/194 (56%), Gaps = 3/194 (1%)
Query: 72 ALRHLRDKDPLLATLI---DAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVA 128
AL +L++ D +L +I + S+ S +LA +I+ QQ++ K A IY RF+
Sbjct: 6 ALSYLQEADSILGEIIVQIGECKLGKTPSNSSLLEALAWAIISQQISTKVANKIYQRFLN 65
Query: 129 LFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMF 188
+N + +L + LR +G+S K YL++LA+ D + + M+D +
Sbjct: 66 FYNDATPLTAKNLLNTPEEDLRSLGISRNKIRYLKNLAKAVEDNLPPLYQLELMEDWEII 125
Query: 189 KMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEK 248
+LT +KG+G W+ M +IF L++ D+LP DLG+R ++ LY L ELP +E + K
Sbjct: 126 HLLTQIKGVGIWTAQMLLIFRLNRLDILPSADLGIRTAIKNLYQLPELPSPEIVEAIGYK 185
Query: 249 WKPYRSVGSWYMWR 262
WKPYR++ SWY+WR
Sbjct: 186 WKPYRTIASWYLWR 199
>gi|67528382|ref|XP_661993.1| hypothetical protein AN4389.2 [Aspergillus nidulans FGSC A4]
gi|40741116|gb|EAA60306.1| hypothetical protein AN4389.2 [Aspergillus nidulans FGSC A4]
gi|259482800|tpe|CBF77626.1| TPA: DNA-3-methyladenine glycosylase, putative (AFU_orthologue;
AFUA_4G06800) [Aspergillus nidulans FGSC A4]
Length = 391
Score = 134 bits (336), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 94/295 (31%), Positives = 140/295 (47%), Gaps = 35/295 (11%)
Query: 6 HTSDNISQNPSASSKITFPPRKIRKL-------TTITPI-TKIAEIPVATAISTNSDNSP 57
H S+ P ++S++ PP R + T +TP + + P S S + P
Sbjct: 89 HNSNYWDSTPISNSRLHTPPPLDRPVEPHRTNATLLTPHGSSLVAYPPGATGSDISPSKP 148
Query: 58 KIFKPLTFKGEV-DIALRHLRDKDPLLATLIDAHR-----PPTFESSRSPFLSLAKSILY 111
+ +P G + + A HL DP L LI AH P PF SL +I+
Sbjct: 149 GLPRPTATTGTLLEKATAHLIATDPRLEPLIKAHHCSLFSPEGLAEKIDPFRSLVGTIIG 208
Query: 112 QQLAYKAAKSIYTRFVALFNGEDNIL--------------------PDAVLAVSPQQLRE 151
QQ++ AA+SI +FVAL G ++ P+ ++ V LR
Sbjct: 209 QQVSGAAARSIREKFVALLWGLNHTYENGDEVQRDREDENEGYFPTPEEIVRVDIPTLRT 268
Query: 152 IGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLH 211
G+S RKA Y+ LAEK+ G LS ++ D + + LT+V+G+G WSV MF F+L
Sbjct: 269 AGLSQRKAEYIHGLAEKFASGELSATMLLNASDEELLEKLTAVRGLGRWSVEMFACFTLK 328
Query: 212 KPDVLPVGDLGVRKGLQVLYGLK-ELPGALKMEEVCEKWKPYRSVGSWYMWRLME 265
+ DV GDLGV++G G + +M ++ K+ PYRS+ WYMWR+ E
Sbjct: 329 RTDVFSTGDLGVQRGCAAFMGKDFKYMSEKEMLDLAAKFAPYRSLFMWYMWRVEE 383
>gi|421749863|ref|ZP_16187218.1| HhH-GPD [Cupriavidus necator HPC(L)]
gi|409771194|gb|EKN53574.1| HhH-GPD [Cupriavidus necator HPC(L)]
Length = 301
Score = 134 bits (336), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 68/196 (34%), Positives = 110/196 (56%), Gaps = 3/196 (1%)
Query: 70 DIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVAL 129
D A L +D +L +I + P S PF++LA+SI+ QQ++ KAA+S++ R A
Sbjct: 103 DEACADLMKRDRILRKMIPTYGPAHLISRGDPFITLARSIVGQQISVKAAQSVWDRLAAA 162
Query: 130 FNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFK 189
+ P +L +L G+S RKA Y+ DLA+ + G + + EMDD +
Sbjct: 163 C---PKLTPAQLLRAGVDKLAACGLSRRKAEYIVDLADHFKAGRVHVDKWAEMDDEAVIA 219
Query: 190 MLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKW 249
LT ++GIG W+ MF++F+L +P+VLP+ D+G+ + Y E + EV W
Sbjct: 220 ELTQIRGIGRWTAEMFLMFNLMRPNVLPLDDIGLINAISANYFSGEPVTRSEAREVAANW 279
Query: 250 KPYRSVGSWYMWRLME 265
+P+R+V +WYMWR ++
Sbjct: 280 EPWRTVATWYMWRSLD 295
>gi|452819252|gb|EME26316.1| DNA-3-methyladenine glycosylase II [Galdieria sulphuraria]
Length = 248
Score = 134 bits (336), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 70/168 (41%), Positives = 104/168 (61%), Gaps = 6/168 (3%)
Query: 102 FLSLAKSILYQQLAYKAAKSIYTRFVALFNGE--DNILPDAVLAVSPQQLREIGVSYRKA 159
F SL K+I+ QQL+ KAAK+I R +L G + + + ++ + QLR+ G+S RK
Sbjct: 71 FPSLIKAIVSQQLSGKAAKAIMERLHSLLQGTVTEVEIANRIVNLEQAQLRQAGLSQRKV 130
Query: 160 SYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVG 219
YL+ LA+ + DG LSD+ + + D + L +VKGIG W++HM MIF+L + DVLP G
Sbjct: 131 EYLKGLAQLFADGTLSDDELASLSDHDLTSRLLTVKGIGEWTIHMLMIFALQRKDVLPFG 190
Query: 220 DLGVRKGLQVLYGLKELPGALKMEE----VCEKWKPYRSVGSWYMWRL 263
DLGVRKG +GL + K +E + E ++PYR+ SW MW++
Sbjct: 191 DLGVRKGAIKFFGLSDQQKRWKKKEEWEALFEPYRPYRTYVSWLMWKV 238
>gi|330810158|ref|YP_004354620.1| DNA-3-methyladenine glycosylase II [Pseudomonas brassicacearum
subsp. brassicacearum NFM421]
gi|327378266|gb|AEA69616.1| putative DNA-3-methyladenine glycosylase II [Pseudomonas
brassicacearum subsp. brassicacearum NFM421]
Length = 214
Score = 134 bits (336), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 63/167 (37%), Positives = 100/167 (59%), Gaps = 1/167 (0%)
Query: 98 SRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNILPDAVLAVSPQQLREIGVSYR 157
+R P+ +L ++I YQQL KA +I R +ALF + P +LA QLR G S
Sbjct: 45 ARDPYEALVRAIAYQQLHAKAGDAILGRLLALFPAQAFPNPGQILATDVAQLRGCGFSAS 104
Query: 158 KASYLRDLAEKYTDGILSDESIVE-MDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVL 216
K + ++ +A+ D I+ D + M+D + + L S++G+G W+V M +I+SL +PD+L
Sbjct: 105 KIATIQGIAQATLDAIVPDYATARAMEDEALIERLVSLRGVGRWTVEMLLIYSLERPDIL 164
Query: 217 PVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSWYMWRL 263
P D GVR+G + GL++ P +M E+ W PYR+V +WY+WR+
Sbjct: 165 PADDFGVREGYRRFKGLEQQPSRKQMVEIGLAWSPYRTVAAWYLWRV 211
>gi|310796874|gb|EFQ32335.1| HhH-GPD superfamily base excision DNA repair protein [Glomerella
graminicola M1.001]
Length = 368
Score = 134 bits (336), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 83/219 (37%), Positives = 114/219 (52%), Gaps = 22/219 (10%)
Query: 69 VDIALRHLRDKDPLLATLIDAHR-----PPTFESSRSPFLSLAKSILYQQLAYKAAKSIY 123
++ A RHL DP + LI+ + P PF SL I+ QQ++ AA+SI
Sbjct: 143 LEEACRHLIKVDPRMKPLIEKNHCRVFSPEGLADKVDPFESLCSGIISQQVSGAAARSIK 202
Query: 124 TRFVALF---NGEDNILP--DAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDES 178
+FVALF GE P V A ++LR G+S RKA Y++ LAEK++ G LS +
Sbjct: 203 NKFVALFTEREGEPKTFPHPSEVAAAPIERLRTAGLSQRKAEYIKGLAEKFSSGELSAQM 262
Query: 179 IVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYG-----L 233
+ E + L +V+G+G WSV MF F L + DV +GDLGV++G+ G L
Sbjct: 263 LAEAPYEEVRDKLIAVRGLGLWSVEMFACFGLKRMDVFSLGDLGVQRGMAAFAGRDVAKL 322
Query: 234 KELPGA-------LKMEEVCEKWKPYRSVGSWYMWRLME 265
K G M E+ K+ PYRSV WYMWR+ E
Sbjct: 323 KAKGGGKWKYMSEKDMTEMASKFVPYRSVFMWYMWRVEE 361
>gi|335428146|ref|ZP_08555065.1| methylated-DNA--protein-cysteine methyltransferase [Haloplasma
contractile SSD-17B]
gi|335431026|ref|ZP_08557911.1| methylated-DNA--protein-cysteine methyltransferase [Haloplasma
contractile SSD-17B]
gi|334887192|gb|EGM25529.1| methylated-DNA--protein-cysteine methyltransferase [Haloplasma
contractile SSD-17B]
gi|334893369|gb|EGM31585.1| methylated-DNA--protein-cysteine methyltransferase [Haloplasma
contractile SSD-17B]
Length = 367
Score = 134 bits (336), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 68/194 (35%), Positives = 113/194 (58%), Gaps = 4/194 (2%)
Query: 70 DIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVAL 129
D + L+ KD + LI+ + ++PF++L SI+YQQLA KAA +I+ RF
Sbjct: 9 DREIEGLKAKDEKMKLLIETIGDINRDYIKNPFIALVHSIVYQQLAIKAATAIWNRFCET 68
Query: 130 FNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFK 189
+ P+++L S + LR G+S K +Y++++A L+ E + M D + +
Sbjct: 69 VT----LTPESLLYTSDELLRTCGLSRTKITYIKNIARAVVQRDLTLEKLTHMSDADIIE 124
Query: 190 MLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKW 249
LT +KGIG W+ MF+IFSL++ DV+ DL + KGL+ LY +K LP + E++ +K+
Sbjct: 125 QLTYIKGIGTWTAEMFLIFSLNRKDVMSYKDLAILKGLKWLYNMKNLPTMTQFEKLKKKF 184
Query: 250 KPYRSVGSWYMWRL 263
PY ++ S Y+W +
Sbjct: 185 TPYNTLASLYLWEV 198
>gi|421888582|ref|ZP_16319669.1| putative DNA-3-methyladenine glycosylase II [Ralstonia solanacearum
K60-1]
gi|378966059|emb|CCF96417.1| putative DNA-3-methyladenine glycosylase II [Ralstonia solanacearum
K60-1]
Length = 304
Score = 134 bits (336), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 68/194 (35%), Positives = 110/194 (56%), Gaps = 3/194 (1%)
Query: 72 ALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFN 131
A L +D +L +I A P S PF++LA+SI+ QQ++ KAA+S++ R V
Sbjct: 109 ACADLMKRDRILRKIIPAFGPAHLASRGDPFVTLARSIVGQQISVKAAQSVWERLV---E 165
Query: 132 GEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKML 191
++P L ++L G+S RKA Y+ DLAE + +G + EM+D + L
Sbjct: 166 ACPKLVPAQFLRAGHEKLAGCGLSKRKAEYILDLAEHFRNGTVHVAKWAEMEDEDVIAEL 225
Query: 192 TSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKP 251
T ++GIG W+ MF++F+L +P+VLP+ D+G+ + Y E + EV W+P
Sbjct: 226 TQIRGIGRWTAEMFLMFNLLRPNVLPLDDIGLINAISQNYFSGEPVTRSEAREVAANWEP 285
Query: 252 YRSVGSWYMWRLME 265
+R+V +WYMWR ++
Sbjct: 286 WRTVATWYMWRSLD 299
>gi|299067220|emb|CBJ38417.1| putative DNA-3-methyladenine glycosylase II [Ralstonia solanacearum
CMR15]
Length = 295
Score = 134 bits (336), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 68/194 (35%), Positives = 110/194 (56%), Gaps = 3/194 (1%)
Query: 72 ALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFN 131
A L +D +L +I A P S PF++LA+SI+ QQ++ KAA+S++ R V
Sbjct: 100 ACADLMKRDRILRKIIPAFGPAHLASRGDPFVTLARSIVGQQISVKAAQSVWERLV---E 156
Query: 132 GEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKML 191
++P L ++L G+S RKA Y+ DLAE + +G + EM+D + L
Sbjct: 157 ACPKLVPAQFLRAGHEKLAGCGLSKRKAEYILDLAEHFRNGTVHVAKWAEMEDEDVIAEL 216
Query: 192 TSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKP 251
T ++GIG W+ MF++F+L +P+VLP+ D+G+ + Y E + EV W+P
Sbjct: 217 TQIRGIGRWTAEMFLMFNLLRPNVLPLDDIGLINAISQNYFSGEPVTRSEAREVAANWEP 276
Query: 252 YRSVGSWYMWRLME 265
+R+V +WYMWR ++
Sbjct: 277 WRTVATWYMWRSLD 290
>gi|380486413|emb|CCF38718.1| HhH-GPD superfamily base excision DNA repair protein
[Colletotrichum higginsianum]
Length = 375
Score = 134 bits (336), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 83/220 (37%), Positives = 115/220 (52%), Gaps = 23/220 (10%)
Query: 69 VDIALRHLRDKDPLLATLIDAHR-----PPTFESSRSPFLSLAKSILYQQLAYKAAKSIY 123
++ A RHL +P + LI+ + P PF SL I+ QQ++ AA+SI
Sbjct: 149 LEEACRHLIQVEPRMKPLIEKNHCRVFSPEGLAEKIDPFESLCSGIISQQVSGAAARSIK 208
Query: 124 TRFVALF-----NGEDNILP--DAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSD 176
+FVALF +GE P V A S + LR G+S RKA Y++ LAEK+ G LS
Sbjct: 209 NKFVALFTEDGSDGESKGFPHPSEVAAASIEHLRTAGLSQRKAEYVKGLAEKFVSGELSA 268
Query: 177 ESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYG---- 232
+ + E + L +V+G+G WSV MF F L + DV +GDLGV++G+ G
Sbjct: 269 QMLAESPYEEVRDRLIAVRGLGLWSVEMFACFGLKRMDVFSLGDLGVQRGMAAFAGRDVA 328
Query: 233 -LKELPGALK------MEEVCEKWKPYRSVGSWYMWRLME 265
LK G K M E+ ++ PYRSV WYMWR+ E
Sbjct: 329 KLKAKGGKWKYMSEKEMVEMASRFAPYRSVFMWYMWRVEE 368
>gi|300704461|ref|YP_003746064.1| DNA-3-methyladenine glycosylase II [Ralstonia solanacearum
CFBP2957]
gi|299072125|emb|CBJ43457.1| putative DNA-3-methyladenine glycosylase II [Ralstonia solanacearum
CFBP2957]
Length = 304
Score = 134 bits (336), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 68/194 (35%), Positives = 110/194 (56%), Gaps = 3/194 (1%)
Query: 72 ALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFN 131
A L +D +L +I A P S PF++LA+SI+ QQ++ KAA+S++ R V
Sbjct: 109 ACADLMKRDRILRKIIPAFGPAHLASRGDPFVTLARSIVGQQISVKAAQSVWERLV---E 165
Query: 132 GEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKML 191
++P L ++L G+S RKA Y+ DLAE + +G + EM+D + L
Sbjct: 166 ACPKLVPAQFLRAGHEKLAGCGLSKRKAEYILDLAEHFRNGTVHVAKWAEMEDEDVIAEL 225
Query: 192 TSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKP 251
T ++GIG W+ MF++F+L +P+VLP+ D+G+ + Y E + EV W+P
Sbjct: 226 TQIRGIGRWTAEMFLMFNLLRPNVLPLDDIGLINAISQNYFSGEPVTRSEAREVAANWEP 285
Query: 252 YRSVGSWYMWRLME 265
+R+V +WYMWR ++
Sbjct: 286 WRTVATWYMWRSLD 299
>gi|271499399|ref|YP_003332424.1| DNA-3-methyladenine glycosylase II [Dickeya dadantii Ech586]
gi|270342954|gb|ACZ75719.1| DNA-3-methyladenine glycosylase II [Dickeya dadantii Ech586]
Length = 228
Score = 133 bits (335), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 71/197 (36%), Positives = 118/197 (59%), Gaps = 5/197 (2%)
Query: 72 ALRHLRDKDPLLATLIDAHRPPTFES--SRSPFLSLAKSILYQQLAYKAAKSIYTRFVAL 129
AL HL D A LID FES +R P+ +L +++ QQL+ +AA +I ++
Sbjct: 13 ALAHLSAIDAHWARLIDGVGHIRFESRPTREPYEALIRAVSSQQLSNRAAAAIISKLQQR 72
Query: 130 FNGEDNILPDA--VLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVE-MDDVT 186
F+ D P A ++A P+ LR+ G S RK ++D+A+ G++ + E +DD T
Sbjct: 73 FDVGDGGFPSAEQLVACEPEVLRQCGFSARKIDTVKDIAQGVLSGLVPARTAAEHLDDDT 132
Query: 187 MFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVC 246
+ + L ++KGIG W+V M +I +L + D++PV DLG+++G + LY L++ P M E+
Sbjct: 133 LIERLCTLKGIGRWTVEMLLISTLERMDIMPVDDLGIKQGFRYLYRLEQDPTRKAMLEMS 192
Query: 247 EKWKPYRSVGSWYMWRL 263
E +PYR++ +WY+WR+
Sbjct: 193 EPCRPYRTLAAWYLWRI 209
>gi|410418984|ref|YP_006899433.1| DNA-3-methyladenine glycosylase 1 [Bordetella bronchiseptica MO149]
gi|427820750|ref|ZP_18987813.1| DNA-3-methyladenine glycosylase 1 [Bordetella bronchiseptica D445]
gi|408446279|emb|CCJ57947.1| DNA-3-methyladenine glycosylase 1 [Bordetella bronchiseptica MO149]
gi|410571750|emb|CCN19992.1| DNA-3-methyladenine glycosylase 1 [Bordetella bronchiseptica D445]
Length = 219
Score = 133 bits (335), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 63/175 (36%), Positives = 99/175 (56%), Gaps = 4/175 (2%)
Query: 90 HRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNILPDAVLAVSPQQL 149
HRP +R P+ +L ++I YQQL +A +I R +ALF G P +LA P L
Sbjct: 37 HRP---LPAREPYEALVRAIAYQQLHARAGDAIVGRLLALFPGGAFPAPGQLLAADPAAL 93
Query: 150 REIGVSYRKASYLRDLAEKYTDGILSDESIVE-MDDVTMFKMLTSVKGIGAWSVHMFMIF 208
R G S K + +A+ DG++ D M D + + LT+++G+G W+V M +I+
Sbjct: 94 RACGFSAAKTQTILGIAQAARDGVVPDRRAARRMSDQALVERLTTLRGVGRWTVEMLLIY 153
Query: 209 SLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSWYMWRL 263
+L + D+LP D GVR G + L G P A +M ++ + W PYR++ +WY+WR+
Sbjct: 154 TLARADILPADDFGVRDGYRRLKGAAATPTARQMRDIGQAWGPYRTLAAWYLWRV 208
>gi|347831149|emb|CCD46846.1| hypothetical protein [Botryotinia fuckeliana]
Length = 438
Score = 133 bits (335), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 80/221 (36%), Positives = 117/221 (52%), Gaps = 29/221 (13%)
Query: 72 ALRHLRDKDPLLATLIDAHRPPTFESSR-----SPFLSLAKSILYQQLAYKAAKSIYTRF 126
A+ HL +P L +I+ H F + PF +L I+ QQ++ AAKSI +F
Sbjct: 206 AIEHLIKVEPKLKPIIEKHPCKMFSAEGLAEEIEPFRALVSGIISQQVSGAAAKSIKAKF 265
Query: 127 VALFNGEDN-------ILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESI 179
VALFN D+ P A++A LR G+S RKA Y+ LA K+T+G L+ +
Sbjct: 266 VALFNPPDSDPSTHTFPTPSAIVATDIPNLRTAGLSQRKAEYISGLALKFTNGDLTTPFL 325
Query: 180 VEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYG--LKELP 237
+ +F L V+G+G WSV MF F+L + DV GDLGV++G+ L G +++L
Sbjct: 326 LTASYEEVFDSLIQVRGLGKWSVEMFACFALKRLDVFSTGDLGVQRGMAALVGRDVEKLK 385
Query: 238 GAL---------------KMEEVCEKWKPYRSVGSWYMWRL 263
A +MEE+ EK+ PYR++ WYMWR+
Sbjct: 386 KAGKGAKGGGKWKYMSEKEMEEIAEKFSPYRTIFMWYMWRV 426
>gi|383622364|ref|ZP_09948770.1| HhH-GPD family protein [Halobiforma lacisalsi AJ5]
gi|448694730|ref|ZP_21697230.1| HhH-GPD family protein [Halobiforma lacisalsi AJ5]
gi|445785315|gb|EMA36110.1| HhH-GPD family protein [Halobiforma lacisalsi AJ5]
Length = 197
Score = 133 bits (335), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 66/183 (36%), Positives = 106/183 (57%), Gaps = 3/183 (1%)
Query: 79 KDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNILP 138
+DP++A L+D H P E + + L SI+ QQL+ +A ++ R + + D I P
Sbjct: 11 EDPVMADLLDRH-DPYVEPDWTEYERLCISIINQQLSTASAMAVRERVFDVLD--DEITP 67
Query: 139 DAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIG 198
D VLA LR+ G+S K Y+R+ A + + + + + D+ + LT +KG+G
Sbjct: 68 DRVLAADDGALRDAGLSRSKIEYMRNAARAFQERDYTRAGLADHDNDEVIDRLTEIKGVG 127
Query: 199 AWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSW 258
W+ M+++F L +PDVLP+GDL VR+G++ LY E +M E+ E W+PYRSV +
Sbjct: 128 EWTARMYLLFVLERPDVLPLGDLAVRRGIEQLYANGEDLTRGEMREIAEAWRPYRSVATR 187
Query: 259 YMW 261
Y+W
Sbjct: 188 YIW 190
>gi|407713994|ref|YP_006834559.1| DNA-3-methyladenine glucosyllase II [Burkholderia phenoliruptrix
BR3459a]
gi|407236178|gb|AFT86377.1| DNA-3-methyladenine glucosyllase II [Burkholderia phenoliruptrix
BR3459a]
Length = 364
Score = 133 bits (335), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 67/196 (34%), Positives = 111/196 (56%), Gaps = 3/196 (1%)
Query: 70 DIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVAL 129
D A L +D +L LI P S PF++LA+S++ QQ++ +A++++T+ A
Sbjct: 166 DKACADLVKRDRILKKLIPKFGPVHLLSRGDPFVTLARSVVGQQISVASAQAVWTKVAAA 225
Query: 130 FNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFK 189
++P + + ++L G+S RKA Y+ DLA+ + G L M+D +
Sbjct: 226 C---PKLVPQQFIKLGQEKLTACGLSKRKAEYVLDLAQHFVSGALHVGKWQSMEDEAVIA 282
Query: 190 MLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKW 249
LT ++GIG W+ MF+IF+L +PDVLP+ DLG+ + + V Y E + EV W
Sbjct: 283 ELTQIRGIGRWTAEMFLIFNLSRPDVLPLDDLGLIRAISVNYFSGEPVTRSEAREVAANW 342
Query: 250 KPYRSVGSWYMWRLME 265
+P+R+V +WYMWR ++
Sbjct: 343 EPWRTVATWYMWRSLD 358
>gi|409422742|ref|ZP_11259827.1| DNA-3-methyladenine glycosylase II [Pseudomonas sp. HYS]
Length = 209
Score = 133 bits (335), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 62/175 (35%), Positives = 109/175 (62%), Gaps = 4/175 (2%)
Query: 90 HRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNILPDAVLAVSPQQL 149
H+P + +R P+ +L ++I YQQL KA +I RF+AL+ P+ VLA +P+QL
Sbjct: 33 HQP---KPTRDPYQALVRAIAYQQLHAKAGDAILGRFLALYPDTGFPSPEQVLATTPEQL 89
Query: 150 REIGVSYRKASYLRDLAEKYTDGILSD-ESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIF 208
R G S K + ++ +A +G++ D + + D + + L +++G+G W+V M +I+
Sbjct: 90 RGCGFSANKLATIQGIARARVEGLVPDYQQASALADEALIERLVNLRGVGRWTVEMLLIY 149
Query: 209 SLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSWYMWRL 263
+L + D+LP D GVR+G + L GL++ P +M ++ ++W PYR+V +WY+WR+
Sbjct: 150 TLERMDILPADDFGVREGYRRLQGLEKQPTRRQMIDLGKRWSPYRTVAAWYLWRV 204
>gi|406994058|gb|EKE13122.1| hypothetical protein ACD_13C00093G0036 [uncultured bacterium]
Length = 198
Score = 133 bits (334), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 71/191 (37%), Positives = 112/191 (58%), Gaps = 5/191 (2%)
Query: 79 KDPLLATLIDAHRPPTFESSRSP--FLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNI 136
KD +A LI T + S + F L +SI+ QQL+ +AA +I+ R L +G+ N
Sbjct: 11 KDKYIAVLIQKWGSCTIKKSLTSKYFEDLLESIVNQQLSGRAASTIFGRVKDLCDGDIN- 69
Query: 137 LPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKG 196
PD +L +S ++LR+ G+S+ K Y++DLA + G L + ++D + + L VKG
Sbjct: 70 -PDIILKLSEEKLRKAGLSFAKIRYIKDLAGRTKSGELDLRKLDRLNDEEVIEKLVVVKG 128
Query: 197 IGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVG 256
IG W+ MF++FSL +PDV P+ DLG+RKG + + G K+ + W P+R+V
Sbjct: 129 IGRWTAEMFLMFSLARPDVFPIDDLGIRKGFEKVTG-KKFDRVKSARFALKSWAPFRTVA 187
Query: 257 SWYMWRLMEAK 267
SWY+WR +E +
Sbjct: 188 SWYLWRSLENR 198
>gi|255949860|ref|XP_002565697.1| Pc22g17880 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211592714|emb|CAP99076.1| Pc22g17880 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 378
Score = 133 bits (334), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 80/223 (35%), Positives = 115/223 (51%), Gaps = 28/223 (12%)
Query: 69 VDIALRHLRDKDPLLATLIDAHRPPTFESSR-----SPFLSLAKSILYQQLAYKAAKSIY 123
++ A HL DP +AT+I+ + P F + PF SL SI+ QQ++ AAKSI
Sbjct: 146 LEKATAHLIAMDPRIATVIERNPCPLFSPAGLAEEIDPFNSLTSSIIGQQVSGAAAKSIR 205
Query: 124 TRFVALFNGEDNILPDAVLAV---SPQQ--------LREIGVSYRKASYLRDLAEKYTDG 172
+F+ALF+ D + PD +P Q LR G+S RKA Y++ LAEK+ G
Sbjct: 206 NKFLALFDLPDTVAPDGHRHAKFPTPDQVAKCDIATLRTAGLSQRKAEYIQGLAEKFASG 265
Query: 173 ILSDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYG 232
L + D +F+ L +V+G+G WSV MF +F+L + DV GDLGV++G G
Sbjct: 266 ELGARMLARATDEELFEKLIAVRGLGRWSVEMFAMFALKRIDVFSTGDLGVQRGCAAFMG 325
Query: 233 ------------LKELPGALKMEEVCEKWKPYRSVGSWYMWRL 263
+ M E+ K+ PYRS+ WYMWR+
Sbjct: 326 RDVSKLKGKGGGKFKYMAEKDMLELAAKFAPYRSLFMWYMWRI 368
>gi|162146346|ref|YP_001600805.1| DNA-3-methyladenine glycosylase [Gluconacetobacter diazotrophicus
PAl 5]
gi|209543651|ref|YP_002275880.1| DNA-3-methyladenine glycosylase II [Gluconacetobacter
diazotrophicus PAl 5]
gi|161784921|emb|CAP54464.1| putative DNA-3-methyladenine glycosylase [Gluconacetobacter
diazotrophicus PAl 5]
gi|209531328|gb|ACI51265.1| DNA-3-methyladenine glycosylase II [Gluconacetobacter
diazotrophicus PAl 5]
Length = 230
Score = 133 bits (334), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 76/205 (37%), Positives = 115/205 (56%), Gaps = 9/205 (4%)
Query: 68 EVDIALR-HLRDKDPLLATLIDAHRPPTF--ESSRSPFLSLAKSILYQQLAYKAAKSIYT 124
E+D A+R HL DP LA L+ P ++R P+ +L +I +QQL +AA++I
Sbjct: 17 ELDRAIRAHLSAADPDLAALVARIGPCGLRMHAAREPYEALVDAIAHQQLHGRAAQAILG 76
Query: 125 RFVALFNGEDNILPD--AVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVE- 181
R VAL G + PD A+LA+ + LR G S K + +A+ DG++ E
Sbjct: 77 RMVALAGG---VFPDPAALLALPVEALRGCGFSGSKIVAMHGVAKARLDGLVPSRRQAES 133
Query: 182 MDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALK 241
+ D + L S++GIG W+V M +IFSL + D++PV D GVR+G ++L GL P +
Sbjct: 134 LSDAELIARLVSLRGIGRWTVEMLLIFSLGRLDIMPVDDFGVREGWRLLKGLDAQPRPKQ 193
Query: 242 MEEVCEKWKPYRSVGSWYMWRLMEA 266
+ + W PYRS +WY+WR +A
Sbjct: 194 LAAIAADWSPYRSAAAWYLWRAADA 218
>gi|448729296|ref|ZP_21711613.1| HhH-GPD family protein [Halococcus saccharolyticus DSM 5350]
gi|445795243|gb|EMA45772.1| HhH-GPD family protein [Halococcus saccharolyticus DSM 5350]
Length = 187
Score = 133 bits (334), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 63/183 (34%), Positives = 108/183 (59%), Gaps = 6/183 (3%)
Query: 79 KDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNILP 138
+DP++A LID P E + + F L +I+ Q ++ +A ++ R LF D + P
Sbjct: 6 EDPVMAELIDEFGPLELEPADNEFRRLVVTIINQSISTASATAVRERVFDLF---DEVTP 62
Query: 139 DAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIG 198
+A+LA P LR+ G+ K Y+R+ A + + L+ + + D + LT ++G+G
Sbjct: 63 EAILAADPDALRDAGLGETKTEYVRNAARAFQEHDLTRAGLADESDEAVIDHLTEIRGVG 122
Query: 199 AWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSW 258
AW+ M++IF L + DV P+GDL VR+G++ LYG E+ +M ++ E+W+PYRS+ +
Sbjct: 123 AWTGRMYLIFVLGREDVFPIGDLAVRRGIESLYG--EMTRE-EMHDLAERWRPYRSIATR 179
Query: 259 YMW 261
Y+W
Sbjct: 180 YLW 182
>gi|448592444|ref|ZP_21651551.1| DNA-3-methyladenine glycosylase [Haloferax elongans ATCC BAA-1513]
gi|445731449|gb|ELZ83033.1| DNA-3-methyladenine glycosylase [Haloferax elongans ATCC BAA-1513]
Length = 194
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 75/198 (37%), Positives = 117/198 (59%), Gaps = 9/198 (4%)
Query: 70 DIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVAL 129
D A R LR D L +++ H P + + + PF L SI+ QQL+ AA +I R L
Sbjct: 3 DDAYRELR-ADTHLGDVVETHGPLSLDPAADPFERLVVSIVNQQLSTTAAATIRDR---L 58
Query: 130 FNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFK 189
F+ + P +LA LR+ G+S +K Y+R++AE + DG LS +S+ MDD +
Sbjct: 59 FD-RVEVTPAGLLAAEESVLRDCGLSGQKVGYVRNVAEAFQDG-LSADSLRTMDDEEVID 116
Query: 190 MLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALK--MEEVCE 247
LT ++G+G W+ MF+IF L + DV PV DLG+R+G++ ++ + ++ G + M E E
Sbjct: 117 ALTEIRGVGVWTAKMFLIFVLAREDVFPVEDLGIRRGMEHVFDV-DVDGLSRAAMVEHAE 175
Query: 248 KWKPYRSVGSWYMWRLME 265
W PYRS S Y+WR+++
Sbjct: 176 TWAPYRSYASLYLWRVVD 193
>gi|323526547|ref|YP_004228700.1| HhH-GPD family protein [Burkholderia sp. CCGE1001]
gi|323383549|gb|ADX55640.1| HhH-GPD family protein [Burkholderia sp. CCGE1001]
Length = 363
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 67/196 (34%), Positives = 111/196 (56%), Gaps = 3/196 (1%)
Query: 70 DIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVAL 129
D A L +D +L LI P S PF++LA+S++ QQ++ +A++++T+ A
Sbjct: 165 DKACADLVKRDRILKKLIPKFGPVHLLSRGDPFVTLARSVVGQQISVASAQAVWTKVAAA 224
Query: 130 FNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFK 189
++P + + ++L G+S RKA Y+ DLA+ + G L M+D +
Sbjct: 225 C---PKLVPQQFIKLGQEKLTACGLSKRKAEYVLDLAQHFVSGALHVGKWQSMEDEAVIA 281
Query: 190 MLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKW 249
LT ++GIG W+ MF+IF+L +PDVLP+ DLG+ + + V Y E + EV W
Sbjct: 282 ELTQIRGIGRWTAEMFLIFNLSRPDVLPLDDLGLIRAISVNYFSGEPVTRSEAREVAANW 341
Query: 250 KPYRSVGSWYMWRLME 265
+P+R+V +WYMWR ++
Sbjct: 342 EPWRTVATWYMWRSLD 357
>gi|448362927|ref|ZP_21551531.1| HhH-GPD family protein [Natrialba asiatica DSM 12278]
gi|445647549|gb|ELZ00523.1| HhH-GPD family protein [Natrialba asiatica DSM 12278]
Length = 208
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 65/188 (34%), Positives = 106/188 (56%), Gaps = 3/188 (1%)
Query: 79 KDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNILP 138
+DP++ LI+ H P ES + + L SI+ QQL+ +A ++ R L D + P
Sbjct: 10 RDPVMNRLIETH-DPYVESDWTAYERLCISIINQQLSTASAAAVRERVFDLLG--DEVTP 66
Query: 139 DAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIG 198
+ VL + LR+ G+S K Y+R+ A + + + + + ++ + + LT +KGIG
Sbjct: 67 ETVLTAEDRALRDAGLSRSKIEYVRNAARAFQEDDYTRDGLADVSNEDVVSRLTEIKGIG 126
Query: 199 AWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSW 258
W+ M+++F L +PDVLP+GDL VR+G+ LYG +M E+ E W+PYRS +
Sbjct: 127 EWTARMYLLFVLERPDVLPLGDLAVRRGIDELYGDGAELSRTEMREIAEAWRPYRSAATR 186
Query: 259 YMWRLMEA 266
Y+W EA
Sbjct: 187 YIWAEYEA 194
>gi|187928102|ref|YP_001898589.1| HhH-GPD family protein [Ralstonia pickettii 12J]
gi|187724992|gb|ACD26157.1| HhH-GPD family protein [Ralstonia pickettii 12J]
Length = 290
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 66/194 (34%), Positives = 110/194 (56%), Gaps = 3/194 (1%)
Query: 72 ALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFN 131
A L +D +L +I P S PF++LA+SI+ QQ++ KAA+S++ R V +
Sbjct: 95 ACADLMKRDRILRKIIPTCGPAHLASRGDPFVTLARSIVGQQISVKAAQSVWERVVGVC- 153
Query: 132 GEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKML 191
++P L ++L G+S RKA Y+ DLA+ + +G + EM+D + L
Sbjct: 154 --PKLVPAQFLRAGQEKLAGCGLSKRKAEYILDLADHFRNGTVHVAKWAEMEDEDVIAEL 211
Query: 192 TSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKP 251
T ++GIG W+ MF++F+L +P+VLP+ D+G+ + Y E + EV W+P
Sbjct: 212 TQIRGIGRWTAEMFLMFNLMRPNVLPLDDIGLINAISQNYFSGEPVTRSEAREVAANWEP 271
Query: 252 YRSVGSWYMWRLME 265
+R+V +WYMWR ++
Sbjct: 272 WRTVATWYMWRSLD 285
>gi|33595698|ref|NP_883341.1| DNA-3-methyladenine glycosylase 1 [Bordetella parapertussis 12822]
gi|33565777|emb|CAE36321.1| DNA-3-methyladenine glycosylase 1 [Bordetella parapertussis]
Length = 219
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 63/175 (36%), Positives = 98/175 (56%), Gaps = 4/175 (2%)
Query: 90 HRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNILPDAVLAVSPQQL 149
HRP +R P+ +L ++I YQQL +A +I R +ALF G P +LA P L
Sbjct: 37 HRP---LPAREPYEALVRAIAYQQLHARAGDAIVGRLLALFPGGAFPAPGQLLAADPAAL 93
Query: 150 REIGVSYRKASYLRDLAEKYTDGILSDESIVE-MDDVTMFKMLTSVKGIGAWSVHMFMIF 208
R G S K + +A+ DG++ D M D + + LT+++G+G W+V M +I+
Sbjct: 94 RACGFSAAKTQTILGIAQAARDGVVPDRRAARRMSDQALVERLTTLRGVGRWTVEMLLIY 153
Query: 209 SLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSWYMWRL 263
+L + D+LP D GVR G + L G P A +M + + W PYR++ +WY+WR+
Sbjct: 154 TLARADILPADDFGVRDGYRRLKGAAATPTARQMRNIGQAWGPYRTLAAWYLWRV 208
>gi|237747643|ref|ZP_04578123.1| HhH-GPD family protein [Oxalobacter formigenes OXCC13]
gi|229379005|gb|EEO29096.1| HhH-GPD family protein [Oxalobacter formigenes OXCC13]
Length = 214
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 68/197 (34%), Positives = 114/197 (57%), Gaps = 3/197 (1%)
Query: 66 KGEVDIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTR 125
+G D A L +DP++ LI ++ PF +LA+SI+ QQ++ KAA SI+ R
Sbjct: 12 EGCWDRACAELGMRDPIMQKLIATSGKDRLQTRGEPFQTLARSIVGQQISVKAADSIWKR 71
Query: 126 FVALFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDV 185
F+ + P+ ++ S + L G+S RK YL+DLA + + + + +M D
Sbjct: 72 FLLVCPASS---PEEIMTASAEMLSAAGLSRRKVEYLKDLAFHFVERKIQADQWPDMPDE 128
Query: 186 TMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEV 245
+ LT V+GIG W+ MF+IF+L +P+VLP+ D+G+ KG+ + Y + G ++E+
Sbjct: 129 EIIADLTQVRGIGRWTAEMFLIFNLMRPNVLPLDDVGLLKGISMSYFSGKDIGKKDVQEI 188
Query: 246 CEKWKPYRSVGSWYMWR 262
KW+P+ +V +WY+WR
Sbjct: 189 AGKWEPWCTVATWYLWR 205
>gi|322699688|gb|EFY91448.1| DNA-3-methyladenine glycosylase, putative [Metarhizium acridum CQMa
102]
Length = 360
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 82/224 (36%), Positives = 118/224 (52%), Gaps = 20/224 (8%)
Query: 63 LTFKGEVDIALRHLRDKDPLLATLIDAHR-----PPTFESSRSPFLSLAKSILYQQLAYK 117
+T + +D+A HL D + L++ + P PF SLA I+ QQ++
Sbjct: 129 ITTENLLDVACAHLIRVDERMRPLVERNHCKIFSPEGLAEKIDPFESLASGIISQQVSGA 188
Query: 118 AAKSIYTRFVALFNGEDNIL----PDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGI 173
AAKSI +FVALF D P V +S + LR G+S RKA Y++ LAEK+ +G
Sbjct: 189 AAKSIKAKFVALFETGDKTTRFPHPSEVTPMSIETLRTAGLSQRKAEYIKGLAEKFANGE 248
Query: 174 LSDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYG- 232
LS E + E + + L +V+G+G WSV MF F L + DV VGDLGV++G+ G
Sbjct: 249 LSTEMLHEAPYEELVEKLIAVRGLGRWSVEMFACFGLKRMDVFSVGDLGVQRGMAAFVGK 308
Query: 233 ----LKELPGALK------MEEVCEKWKPYRSVGSWYMWRLMEA 266
LK G K M ++ K+ PYRS+ W MWR+ ++
Sbjct: 309 DVAKLKSKGGKWKYMSEKEMLDISGKFAPYRSLFMWLMWRVEDS 352
>gi|33600221|ref|NP_887781.1| DNA-3-methyladenine glycosylase 1 [Bordetella bronchiseptica RB50]
gi|410474134|ref|YP_006897415.1| DNA-3-methyladenine glycosylase 1 [Bordetella parapertussis Bpp5]
gi|427813456|ref|ZP_18980520.1| DNA-3-methyladenine glycosylase 1 [Bordetella bronchiseptica 1289]
gi|33567819|emb|CAE31733.1| DNA-3-methyladenine glycosylase 1 [Bordetella bronchiseptica RB50]
gi|408444244|emb|CCJ50966.1| DNA-3-methyladenine glycosylase 1 [Bordetella parapertussis Bpp5]
gi|410564456|emb|CCN22003.1| DNA-3-methyladenine glycosylase 1 [Bordetella bronchiseptica 1289]
Length = 219
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 63/175 (36%), Positives = 99/175 (56%), Gaps = 4/175 (2%)
Query: 90 HRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNILPDAVLAVSPQQL 149
HRP +R P+ +L ++I YQQL +A +I R +ALF G P +LA P L
Sbjct: 37 HRP---LPAREPYEALVRAIAYQQLHARAGDAIVGRLLALFPGGAFPAPGQLLAADPAAL 93
Query: 150 REIGVSYRKASYLRDLAEKYTDGILSDESIVE-MDDVTMFKMLTSVKGIGAWSVHMFMIF 208
R G S K + +A+ DG++ D M D + + LT+++G+G W+V M +I+
Sbjct: 94 RACGFSAAKTQTILGIAQAARDGVVPDRRAARRMSDQALVERLTTLRGVGRWTVEMLLIY 153
Query: 209 SLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSWYMWRL 263
+L + D+LP D GVR G + L G P A +M ++ + W PYR++ +WY+WR+
Sbjct: 154 TLARADILPADDFGVRDGYRRLKGGAATPTARQMRDIGQAWGPYRTLAAWYLWRV 208
>gi|398856157|ref|ZP_10612129.1| 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase
[Pseudomonas sp. GM80]
gi|398230275|gb|EJN16327.1| 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase
[Pseudomonas sp. GM80]
Length = 205
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 68/191 (35%), Positives = 111/191 (58%), Gaps = 10/191 (5%)
Query: 74 RHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGE 133
RH+ P L H+P +R P+ SL ++I YQQL KA +I R V LF +
Sbjct: 21 RHIAAVGPCL------HQP---HPARDPYESLVRAIAYQQLHAKAGDAIVGRLVGLFPSQ 71
Query: 134 DNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSD-ESIVEMDDVTMFKMLT 192
P+ +LA +++R G S K + ++ +A+ DG++ D + + MD+ + + L
Sbjct: 72 SFPRPEQILATDFERMRSCGFSAGKIATIQGIAQATLDGVVPDYATALAMDNEVLIERLI 131
Query: 193 SVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPY 252
S++G+G W+V M +I+SL + D+LP D GVR+G + L GL+ P +M E+ KW P+
Sbjct: 132 SLRGVGRWTVEMLLIYSLERMDILPADDFGVREGYRRLKGLEVQPTRKQMIEIGLKWSPF 191
Query: 253 RSVGSWYMWRL 263
R+V +WY+WR+
Sbjct: 192 RTVAAWYLWRV 202
>gi|342878011|gb|EGU79424.1| hypothetical protein FOXB_10100 [Fusarium oxysporum Fo5176]
Length = 351
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 77/214 (35%), Positives = 113/214 (52%), Gaps = 20/214 (9%)
Query: 72 ALRHLRDKDPLLATLIDAHR-----PPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRF 126
A +L DP + L+++H P PF +L+ I+ QQ++ AAKSI +F
Sbjct: 131 ACDYLVKVDPRMKPLVESHHCRVFSPEGLAEKIDPFENLSSGIISQQVSGAAAKSIKAKF 190
Query: 127 VALFNGEDNIL---PDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMD 183
+ LF + I P V A S +LR G+S RKA Y++ LAEK+ G LS + + +
Sbjct: 191 LTLFEEQPGIRFPHPSQVAAKSIDELRTAGLSQRKAEYIKGLAEKFVSGELSAQMLHDAS 250
Query: 184 DVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYG-----LKELPG 238
D + + L +V+G+G WSV MF F L + DV +GDLGV++G+ G LK G
Sbjct: 251 DAEVMEKLIAVRGLGKWSVEMFACFGLKRMDVFSLGDLGVQRGMAAFVGRDIAKLKAKGG 310
Query: 239 A-------LKMEEVCEKWKPYRSVGSWYMWRLME 265
M E+ ++ PYRS+ WYMWR+ E
Sbjct: 311 GKWKYMSEQDMTELSTRFSPYRSLFMWYMWRVEE 344
>gi|397775242|ref|YP_006542788.1| HhH-GPD family protein [Natrinema sp. J7-2]
gi|397684335|gb|AFO58712.1| HhH-GPD family protein [Natrinema sp. J7-2]
Length = 196
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 64/183 (34%), Positives = 104/183 (56%), Gaps = 3/183 (1%)
Query: 79 KDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNILP 138
+DP++A L+D H P E + + L SI+ QQL+ +A ++ R + G + P
Sbjct: 11 EDPVMAGLLDRH-DPYAEPDWTEYERLCISIINQQLSTASAAAVRERVFEVLEG--AVTP 67
Query: 139 DAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIG 198
+VLA LR+ G+S RK Y+R+ A + + S + + + +LT +KGIG
Sbjct: 68 ASVLAADEAALRDAGLSRRKVEYMRNAARAFQENDYSQAGLASRSNAEVVDLLTEIKGIG 127
Query: 199 AWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSW 258
W+ M+++F L +PDVLP+GDL VR+G++ LY + +M E+ E W+PYRS +
Sbjct: 128 TWTARMYLLFVLERPDVLPLGDLAVRRGIESLYADGDELTRAEMREIAEPWRPYRSAATR 187
Query: 259 YMW 261
Y+W
Sbjct: 188 YIW 190
>gi|398991503|ref|ZP_10694632.1| 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase
[Pseudomonas sp. GM24]
gi|399014631|ref|ZP_10716918.1| 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase
[Pseudomonas sp. GM16]
gi|398110387|gb|EJM00292.1| 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase
[Pseudomonas sp. GM16]
gi|398139526|gb|EJM28523.1| 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase
[Pseudomonas sp. GM24]
Length = 209
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 64/175 (36%), Positives = 105/175 (60%), Gaps = 4/175 (2%)
Query: 90 HRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNILPDAVLAVSPQQL 149
H+P +R P+ SL ++I YQQL KA +I R V LF G+ P+ +LA +++
Sbjct: 31 HQP---HPARDPYESLVRAIAYQQLHAKAGDAIVGRLVGLFPGQSFPRPEQILATDFERM 87
Query: 150 REIGVSYRKASYLRDLAEKYTDGILSD-ESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIF 208
R G S K + ++ +A+ DG++ D + + M D + + L S++G+G W+V M +I+
Sbjct: 88 RSCGFSAGKIATIQGIAQATLDGVVPDYATALAMGDEALIERLVSLRGVGRWTVEMLLIY 147
Query: 209 SLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSWYMWRL 263
SL + D+LP D GVR+G + L GL+ P +M E+ W P+R+V +WY+WR+
Sbjct: 148 SLERMDILPADDFGVREGYRRLKGLEVQPTRRQMVEIGLAWSPFRTVAAWYLWRV 202
>gi|170694949|ref|ZP_02886098.1| HhH-GPD family protein [Burkholderia graminis C4D1M]
gi|170140047|gb|EDT08226.1| HhH-GPD family protein [Burkholderia graminis C4D1M]
Length = 370
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 117/210 (55%), Gaps = 7/210 (3%)
Query: 56 SPKIFKPLTFKGEVDIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLA 115
+P++ +P + D A L +D +L LI P S PF++LA+S++ QQ++
Sbjct: 162 APEVTRPDYW----DKACADLVKRDRILKKLIPKFGPVHLLSRGDPFVTLARSVVGQQIS 217
Query: 116 YKAAKSIYTRFVALFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILS 175
+A++++ + A ++P + + ++L G+S RKA Y+ DLA+ + G L
Sbjct: 218 VASAQAVWAKVAAAC---PKLVPQQFIKLGQEKLTACGLSRRKAEYVLDLAQHFVSGALH 274
Query: 176 DESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKE 235
M+D + LT ++GIG W+ MF+IF+L +PDVLP+ DLG+ + + V Y E
Sbjct: 275 VGKWRSMEDEAVIAELTQIRGIGRWTAEMFLIFNLSRPDVLPLDDLGLIRAISVNYFSGE 334
Query: 236 LPGALKMEEVCEKWKPYRSVGSWYMWRLME 265
+ EV W+P+R+V +WYMWR ++
Sbjct: 335 PVTRSEAREVAANWEPWRTVATWYMWRSLD 364
>gi|322710222|gb|EFZ01797.1| DNA-3-methyladenine glycosylase, putative [Metarhizium anisopliae
ARSEF 23]
Length = 360
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 80/224 (35%), Positives = 119/224 (53%), Gaps = 20/224 (8%)
Query: 63 LTFKGEVDIALRHLRDKDPLLATLIDAHR-----PPTFESSRSPFLSLAKSILYQQLAYK 117
+T + +D+A HL D + L++ + P PF SLA I+ QQ++
Sbjct: 129 ITTENLLDVACAHLISVDERMRPLVERNHCKVFSPEGLAEKIDPFESLASGIISQQVSGA 188
Query: 118 AAKSIYTRFVALFNGEDNIL----PDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGI 173
AA+SI +F+ALF+ D P V V + LR G+S RKA Y++ LAEK+ +G
Sbjct: 189 AARSIKAKFLALFDTRDRTTRFPHPSEVAPVPVETLRTAGLSQRKAEYIKGLAEKFANGE 248
Query: 174 LSDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYG- 232
LS E + + + + L +V+G+G WSV MF F L + DV VGDLGV++G+ G
Sbjct: 249 LSTEMLHDAPYEELVEKLIAVRGLGRWSVEMFACFGLKRMDVFSVGDLGVQRGMAAFVGR 308
Query: 233 ----LKELPGALK------MEEVCEKWKPYRSVGSWYMWRLMEA 266
LK G K M ++ EK+ PYRS+ W MWR+ ++
Sbjct: 309 DVAKLKSKGGKWKYMSEREMLDISEKFAPYRSLFMWLMWRVEDS 352
>gi|448414240|ref|ZP_21577379.1| HhH-GPD family protein [Halosarcina pallida JCM 14848]
gi|445682533|gb|ELZ34950.1| HhH-GPD family protein [Halosarcina pallida JCM 14848]
Length = 204
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 65/188 (34%), Positives = 107/188 (56%), Gaps = 9/188 (4%)
Query: 80 DPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNILPD 139
DP++ L++ R P E S F + ++ YQ ++ +A ++ R + +GE + P+
Sbjct: 12 DPVMRRLME-RRDPYTEREWSEFERIVVAVAYQSISTASAAAVTERVFEVLDGE--VTPE 68
Query: 140 AVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIGA 199
VL LRE G+S RK Y+R+ A + + S E++ + D + + LT V+G+G
Sbjct: 69 RVLDADESALREAGLSERKVEYVRNAARAFRESDFSREALADYSDGEVVERLTEVRGVGE 128
Query: 200 WSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGA------LKMEEVCEKWKPYR 253
W+ MF++F L + DVLP+GDL VR+G++ LYG G +M EV E+W+PYR
Sbjct: 129 WTAEMFLLFVLEREDVLPLGDLAVRRGIEDLYGDGRGSGEDGELTRAEMREVAERWRPYR 188
Query: 254 SVGSWYMW 261
S+ + Y+W
Sbjct: 189 SLATRYVW 196
>gi|425781643|gb|EKV19595.1| DNA-3-methyladenine glycosylase, putative [Penicillium digitatum
PHI26]
gi|425782870|gb|EKV20751.1| DNA-3-methyladenine glycosylase, putative [Penicillium digitatum
Pd1]
Length = 374
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 79/220 (35%), Positives = 113/220 (51%), Gaps = 28/220 (12%)
Query: 72 ALRHLRDKDPLLATLIDAHRPPTFESSR-----SPFLSLAKSILYQQLAYKAAKSIYTRF 126
A HL DP +AT+I+ H P F + PF SL SI+ QQ++ AAKSI +F
Sbjct: 145 ATAHLIATDPRIATVIEQHPCPLFSPAGLAEEIDPFNSLTSSIIGQQVSGAAAKSIRNKF 204
Query: 127 VALFNGEDNILPDAVLAV---SPQQ--------LREIGVSYRKASYLRDLAEKYTDGILS 175
+ALF+ D + PD +P Q LR G+S RKA Y++ LA+K+ G L
Sbjct: 205 LALFDLPDTVAPDGHRHAKFPTPDQVAKCDIPTLRTAGLSQRKAEYIQGLAQKFASGELG 264
Query: 176 DESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYG--- 232
+ D +F+ L +V+G+G WSV MF +F+L + DV GDLGV++G G
Sbjct: 265 ARMLALATDEELFEKLIAVRGLGRWSVEMFALFALKRIDVFSTGDLGVQRGCAAFMGRDV 324
Query: 233 ---------LKELPGALKMEEVCEKWKPYRSVGSWYMWRL 263
+ + E+ K+ PYRS+ WYMWR+
Sbjct: 325 SKLKGKGGGKFKYMAEKDLLELAAKFAPYRSLFMWYMWRI 364
>gi|367039099|ref|XP_003649930.1| hypothetical protein THITE_2109071 [Thielavia terrestris NRRL 8126]
gi|346997191|gb|AEO63594.1| hypothetical protein THITE_2109071 [Thielavia terrestris NRRL 8126]
Length = 389
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 81/232 (34%), Positives = 116/232 (50%), Gaps = 38/232 (16%)
Query: 72 ALRHLRDKDPLLATLIDAH-----RPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRF 126
A HL DP + LID H P PF +L SI+ QQ++ AAKSI RF
Sbjct: 151 ACAHLIKVDPRMKPLIDKHYCRMFSPEGLAEQIDPFEALCSSIISQQVSGAAAKSIKARF 210
Query: 127 VALFN-----------GEDNI---------LPDAVLAVSPQQLREIGVSYRKASYLRDLA 166
+ALFN +DN P+ V A +LR G+S RKA Y++ LA
Sbjct: 211 IALFNSGSGPNAADGPADDNDGPGTRASFPRPEEVAATPLDRLRTAGLSQRKAEYIQGLA 270
Query: 167 EKYTDGILSDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKG 226
K+ G L+ + + + D + LT+V+G+G WS MF F+L + DV +GDLGV++G
Sbjct: 271 AKFGTGELTAQMLADAPDDELLARLTAVRGLGRWSAEMFACFALKRMDVFSLGDLGVQRG 330
Query: 227 LQVLYG-------LKELPGALK------MEEVCEKWKPYRSVGSWYMWRLME 265
+ G K G K M E+ ++++P+RS+ WYMWR+ E
Sbjct: 331 MAAFVGRDVAKLKAKGAGGKWKYMSEREMVEISDRFRPFRSLFMWYMWRVEE 382
>gi|71906482|ref|YP_284069.1| HhH-GPD [Dechloromonas aromatica RCB]
gi|71846103|gb|AAZ45599.1| DNA-3-methyladenine glycosylase II [Dechloromonas aromatica RCB]
Length = 205
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 67/194 (34%), Positives = 112/194 (57%), Gaps = 3/194 (1%)
Query: 72 ALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFN 131
A+ L +D +A L++ + + S F++LA+SI+ QQ++ KAA S++ RF
Sbjct: 9 AISDLSRRDAAMAELVERYAGLSLVSRGDAFMTLARSIIGQQISVKAADSVWRRFSEQVG 68
Query: 132 GEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKML 191
++ P +LAV + L G+S RK YL DLA ++ G L + +DD + L
Sbjct: 69 ---SVTPTQILAVGERGLAGCGLSKRKTEYLCDLASHFSSGQLDPTAWSGLDDEAIITEL 125
Query: 192 TSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKP 251
+V+GIG W+ MF+IF+L +PDV P+ D+G+++ + Y E + E E+W+P
Sbjct: 126 VAVRGIGRWTAEMFLIFNLMRPDVFPLDDIGLQRAVNEHYFKGEKQPRKILAEFGERWRP 185
Query: 252 YRSVGSWYMWRLME 265
+RSV +WY+WR ++
Sbjct: 186 WRSVATWYLWRSLD 199
>gi|448308553|ref|ZP_21498430.1| HhH-GPD family protein [Natronorubrum bangense JCM 10635]
gi|445593841|gb|ELY48010.1| HhH-GPD family protein [Natronorubrum bangense JCM 10635]
Length = 201
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 64/187 (34%), Positives = 107/187 (57%), Gaps = 2/187 (1%)
Query: 80 DPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNILPD 139
DP++A +ID P + + + L SI+ QQL+ +A ++ R + GE + P+
Sbjct: 17 DPVMAAVIDRREPHPLDPNPDEYERLCVSIINQQLSTASAAAVRERVFDVLGGE--VTPE 74
Query: 140 AVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIGA 199
AVLA S LR G+S K Y+ + A + + L+ E + + + + + LT +KG+G
Sbjct: 75 AVLAASRDDLRSAGLSRTKVDYVENAARAFQERDLTREGLADYTNEDVRRELTRIKGVGD 134
Query: 200 WSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSWY 259
W+ M+++F L +PDVLP+GDL VR+G++ LY E +M + + W+P+RS+ S Y
Sbjct: 135 WTARMYLMFVLQRPDVLPLGDLAVRRGIEQLYNDGEALSRAEMRAIADPWRPHRSLASRY 194
Query: 260 MWRLMEA 266
+W EA
Sbjct: 195 IWAEYEA 201
>gi|448318534|ref|ZP_21508053.1| HhH-GPD family protein [Natronococcus jeotgali DSM 18795]
gi|445598795|gb|ELY52846.1| HhH-GPD family protein [Natronococcus jeotgali DSM 18795]
Length = 182
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 65/185 (35%), Positives = 106/185 (57%), Gaps = 3/185 (1%)
Query: 83 LATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNILPDAVL 142
+A L+D H P E + + L SI+ QQ++ +A +I R + GE + P+ VL
Sbjct: 1 MAELVDRH-DPYVEPDWTEYERLCISIINQQVSTASAAAIRGRVFDVLGGE--VTPETVL 57
Query: 143 AVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIGAWSV 202
A + L E G+S K Y+R+ A + DG + + E + + LT ++G+G W+
Sbjct: 58 AADEEALYEAGLSRSKIEYVRNAARAFRDGDYTRAGLAEYSNEAVIDRLTEIRGVGDWTA 117
Query: 203 HMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSWYMWR 262
M+++F L +PDVLP+GDL VR+G++ LYG + +M E+ E W+PYRSV + Y+W
Sbjct: 118 RMYLLFVLERPDVLPLGDLAVRRGIENLYGNGDELARAEMREIAEDWRPYRSVATRYIWA 177
Query: 263 LMEAK 267
E++
Sbjct: 178 EYESE 182
>gi|187924486|ref|YP_001896128.1| HhH-GPD family protein [Burkholderia phytofirmans PsJN]
gi|187715680|gb|ACD16904.1| HhH-GPD family protein [Burkholderia phytofirmans PsJN]
Length = 349
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 117/210 (55%), Gaps = 7/210 (3%)
Query: 56 SPKIFKPLTFKGEVDIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLA 115
+P++ +P + D A L +D +L LI P S PF++LA+S++ QQ++
Sbjct: 141 TPEVTRPAYW----DKACADLVKRDRILKKLIPKFGPVHLLSRGDPFVTLARSVVGQQIS 196
Query: 116 YKAAKSIYTRFVALFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILS 175
+A++++ + A ++P + + ++L G+S RKA Y+ DLA+ + G L
Sbjct: 197 VASAQAVWAKVEAAC---PKLVPQQFIKLGLEKLTTCGLSKRKAEYVLDLAQHFVSGALH 253
Query: 176 DESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKE 235
M+D + LT ++GIG W+ MF+IF+L +PDVLP+ DLG+ + + V Y E
Sbjct: 254 VGKWTSMEDEAVIAELTQIRGIGRWTAEMFLIFNLSRPDVLPLDDLGLIRAISVNYFSGE 313
Query: 236 LPGALKMEEVCEKWKPYRSVGSWYMWRLME 265
+ EV W+P+R+V +WYMWR ++
Sbjct: 314 PVTRSEAREVAANWEPWRTVATWYMWRSLD 343
>gi|406926336|gb|EKD62582.1| HhH-GPD [uncultured bacterium]
Length = 199
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 74/198 (37%), Positives = 117/198 (59%), Gaps = 2/198 (1%)
Query: 72 ALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFN 131
AL HL+ DP+L ++ TF S + F+ + ++I+ QQL+ A++I RF LF
Sbjct: 4 ALAHLKG-DPVLKKILHKSYKFTFGKSENLFVDIIENIIGQQLSSGPAETITNRFWGLFT 62
Query: 132 GEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKML 191
PD VLAV +LR +G+S+ KASY+++L+ + + L + + +DD + L
Sbjct: 63 EPLYPAPDVVLAVPDDKLRAVGMSWAKASYIKNLSREIVELRLDLDLVKTLDDNHVIVEL 122
Query: 192 TSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKP 251
T VKGIG W+ M +IF L++PDV +GDLG+R + LY + A K+E + KW P
Sbjct: 123 TKVKGIGRWTAEMILIFHLNRPDVFSLGDLGLRTAVSKLYRVNRDDVA-KIEAISLKWSP 181
Query: 252 YRSVGSWYMWRLMEAKGV 269
YRS+ S Y+W+ ++ K +
Sbjct: 182 YRSLASRYLWKSLDEKAL 199
>gi|451812031|ref|YP_007448485.1| DNA-3-methyladenine glycosylase II [Candidatus
Kinetoplastibacterium galatii TCC219]
gi|451777933|gb|AGF48881.1| DNA-3-methyladenine glycosylase II [Candidatus
Kinetoplastibacterium galatii TCC219]
Length = 208
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 67/196 (34%), Positives = 113/196 (57%), Gaps = 2/196 (1%)
Query: 72 ALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFN 131
A+ L+ KD +L +I + S SPF++L SI+ QQ++ K+A I+ +F+ +F
Sbjct: 15 AVSDLKKKDRILKRIIPLYSEKKLLPSESPFITLVHSIVNQQISTKSACVIWGKFIKIFG 74
Query: 132 GEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKML 191
+ P+ ++ + L IG+ RK YL DLA + + ++ + V MDD ++ L
Sbjct: 75 KLPS--PEDIICCRRENLNSIGLPRRKVEYLNDLAIHFYEKKINPDKWVSMDDESVISEL 132
Query: 192 TSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKP 251
+S+KGIG W+ MF+IFSL +PDV+P+ D G+ + + + Y E + EV W+P
Sbjct: 133 SSIKGIGRWTSEMFLIFSLCRPDVMPLDDAGLIRAISLHYFSGEPVSRFEAREVSMAWRP 192
Query: 252 YRSVGSWYMWRLMEAK 267
+R+V SWY+W +E +
Sbjct: 193 WRTVASWYLWCSIEQQ 208
>gi|169773871|ref|XP_001821404.1| DNA-3-methyladenine glycosylase [Aspergillus oryzae RIB40]
gi|83769265|dbj|BAE59402.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 378
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 82/222 (36%), Positives = 115/222 (51%), Gaps = 27/222 (12%)
Query: 69 VDIALRHLRDKDPLLATLIDAHRPPTFE-----SSRSPFLSLAKSILYQQLAYKAAKSIY 123
++ A+ HL D L +I H P F PF SL SI+ QQ++ AAKSI
Sbjct: 147 LEKAVAHLIATDSRLEPVIKQHPCPLFSPEGLAEEVDPFRSLVVSIIGQQVSGAAAKSIK 206
Query: 124 TRFVALFNGED--NILPDAVLAVSPQQ--------LREIGVSYRKASYLRDLAEKYTDGI 173
+FVALFN D + P+A P++ LR G+S RKA Y++ L++K+ G
Sbjct: 207 NKFVALFNSGDSGDNAPEASRFPKPEEIIKCDIATLRTAGLSQRKAEYIQGLSQKFASGE 266
Query: 174 LSDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYG- 232
LS ++ D + + LT+V+G+G WSV MF F+L + DV GDLGV++G G
Sbjct: 267 LSARMLLNASDEELLEKLTAVRGLGKWSVEMFACFALKRIDVFSTGDLGVQRGCAAFMGK 326
Query: 233 ----LKELPGA-------LKMEEVCEKWKPYRSVGSWYMWRL 263
LK G M E+ K+ PYRS+ WYMWR+
Sbjct: 327 DVSKLKAKGGGKFKYMAEKDMLELAAKFAPYRSLFMWYMWRV 368
>gi|238491890|ref|XP_002377182.1| DNA-3-methyladenine glycosylase, putative [Aspergillus flavus
NRRL3357]
gi|220697595|gb|EED53936.1| DNA-3-methyladenine glycosylase, putative [Aspergillus flavus
NRRL3357]
Length = 378
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 82/222 (36%), Positives = 115/222 (51%), Gaps = 27/222 (12%)
Query: 69 VDIALRHLRDKDPLLATLIDAHRPPTFE-----SSRSPFLSLAKSILYQQLAYKAAKSIY 123
++ A+ HL D L +I H P F PF SL SI+ QQ++ AAKSI
Sbjct: 147 LEKAVAHLIATDSRLEPVIKQHPCPLFSPEGLAEEVDPFRSLVVSIIGQQVSGAAAKSIK 206
Query: 124 TRFVALFNGED--NILPDAVLAVSPQQ--------LREIGVSYRKASYLRDLAEKYTDGI 173
+FVALFN D + P+A P++ LR G+S RKA Y++ L++K+ G
Sbjct: 207 NKFVALFNSGDSGDNAPEASRFPKPEEIIKCDIATLRTAGLSQRKAEYIQGLSQKFASGE 266
Query: 174 LSDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYG- 232
LS ++ D + + LT+V+G+G WSV MF F+L + DV GDLGV++G G
Sbjct: 267 LSARMLLNASDEELLEKLTAVRGLGKWSVEMFACFALKRIDVFSTGDLGVQRGCAAFMGK 326
Query: 233 ----LKELPGA-------LKMEEVCEKWKPYRSVGSWYMWRL 263
LK G M E+ K+ PYRS+ WYMWR+
Sbjct: 327 DVSKLKAKGGGKFKYMAEKDMLELAAKFAPYRSLFMWYMWRV 368
>gi|295676872|ref|YP_003605396.1| HhH-GPD family protein [Burkholderia sp. CCGE1002]
gi|295436715|gb|ADG15885.1| HhH-GPD family protein [Burkholderia sp. CCGE1002]
Length = 368
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 116/210 (55%), Gaps = 7/210 (3%)
Query: 56 SPKIFKPLTFKGEVDIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLA 115
+P++ +P + D A L +D +L LI P S PF++LA+S++ QQ++
Sbjct: 160 APEVTRPAYW----DKACADLVKRDRILKKLIPKFGPVHLLSRGDPFVTLARSVVGQQIS 215
Query: 116 YKAAKSIYTRFVALFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILS 175
+A++++ + A ++P + + ++L G+S RKA Y+ DLA + G L
Sbjct: 216 VASAQAVWAKVEAAC---PKLVPQQFIKLGLEKLTACGLSKRKAEYVLDLARHFVSGALH 272
Query: 176 DESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKE 235
MDD + LT ++GIG W+ MF+IF+L +PDVLP+ DLG+ + + V Y E
Sbjct: 273 VGKWTSMDDEAVISELTQIRGIGRWTAEMFLIFNLSRPDVLPLDDLGLIRAISVNYFSGE 332
Query: 236 LPGALKMEEVCEKWKPYRSVGSWYMWRLME 265
+ EV W+P+R+V +WYMWR ++
Sbjct: 333 PVTRSEAREVAANWEPWRTVATWYMWRSLD 362
>gi|448398363|ref|ZP_21570012.1| HhH-GPD family protein [Haloterrigena limicola JCM 13563]
gi|445671378|gb|ELZ23966.1| HhH-GPD family protein [Haloterrigena limicola JCM 13563]
Length = 197
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 70/189 (37%), Positives = 110/189 (58%), Gaps = 4/189 (2%)
Query: 79 KDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNILP 138
+DP+LA +ID H E + F L SI+ QQL+ +A ++ R + +G + P
Sbjct: 12 EDPVLAAVIDRHDLHPLEPVENEFERLCVSIINQQLSTASAAAVRERVFDILDG--VVTP 69
Query: 139 DAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIG 198
++VL S LRE G+S K Y+ + A + + L+ +VE + + LT + GIG
Sbjct: 70 ESVLDASRDALREAGLSRTKVDYVENAARAFRERDLTRGGLVEHANEEVIADLTEITGIG 129
Query: 199 AWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYG-LKELPGALKMEEVCEKWKPYRSVGS 257
W+ +M++IF L +PDVLP+GDL VR+G++ LY ELP + +M E+ E W+P+RS +
Sbjct: 130 EWTANMYLIFVLERPDVLPLGDLAVRRGIEQLYNDGDELPRS-EMREIAEPWRPHRSTAT 188
Query: 258 WYMWRLMEA 266
Y+W EA
Sbjct: 189 RYIWAEYEA 197
>gi|448352144|ref|ZP_21540936.1| HhH-GPD family protein [Natrialba taiwanensis DSM 12281]
gi|445631943|gb|ELY85167.1| HhH-GPD family protein [Natrialba taiwanensis DSM 12281]
Length = 209
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 62/189 (32%), Positives = 110/189 (58%), Gaps = 3/189 (1%)
Query: 79 KDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNILP 138
+DP+++ L++ H P + +++ + L SI+ QQL+ +A ++ R L ED + P
Sbjct: 11 QDPVMSRLVETH-DPYVKPNQTEYERLCISIINQQLSTASAAAVRERVFDLL--EDEVTP 67
Query: 139 DAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIG 198
+ VL + LR+ G+S K Y+R+ A + + + + + ++ + + LT +KGIG
Sbjct: 68 ETVLTAEDRALRDAGLSRSKIEYVRNAARAFQEDDYTRDGLADVSNEDVVSRLTEIKGIG 127
Query: 199 AWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSW 258
W+ M+++F L +PD+LP+GDL VR+G+ LYG +M E+ E W+PYRS +
Sbjct: 128 EWTARMYLLFVLERPDILPLGDLAVRRGIDELYGDGAELTRAEMREIAEAWRPYRSAATR 187
Query: 259 YMWRLMEAK 267
Y+W EA+
Sbjct: 188 YIWAEYEAE 196
>gi|145256689|ref|XP_001401486.1| DNA-3-methyladenine glycosylase [Aspergillus niger CBS 513.88]
gi|134058393|emb|CAK38578.1| unnamed protein product [Aspergillus niger]
Length = 412
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 100/285 (35%), Positives = 142/285 (49%), Gaps = 36/285 (12%)
Query: 16 SASSKITFPP--RKIR-KLTTITPITKIAEIPVATAISTNSDNSP-KIFKP---LTFKGE 68
++SS+ T PP R + T T +T VA T++D SP K +P T
Sbjct: 121 TSSSRTTPPPLDRPVEPHHTNATLLTPHGSSLVAYPPGTDADASPSKTGRPRPTATTGTL 180
Query: 69 VDIALRHLRDKDPLLATLIDAHRPPTFESSR-----SPFLSLAKSILYQQLAYKAAKSIY 123
++ A HL DP L +LI P F PF SL SI+ QQ++ AAKSI
Sbjct: 181 LEKAAAHLIATDPRLESLIREQPCPLFTPEGLAEEIDPFRSLVSSIIGQQVSGAAAKSIK 240
Query: 124 TRFVALF--NGEDN--------ILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGI 173
+FVALF N +D P+ ++ + LR G+S RKA Y+ L+EK+ +G
Sbjct: 241 DKFVALFKTNNKDEDGTRPSFFPTPEEIIKMDISTLRTAGLSQRKAEYIHGLSEKFANGE 300
Query: 174 LSDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYG- 232
LS ++ D + + LT+V+G+G WSV MF F+L + DV GDLGV++G V G
Sbjct: 301 LSARMLLNASDEELVEKLTAVRGLGKWSVEMFACFALKRIDVFSTGDLGVQRGCAVFVGK 360
Query: 233 ------------LKELPGALKMEEVCEKWKPYRSVGSWYMWRLME 265
K +P M E+ K+ PYRS+ WYMWR+ +
Sbjct: 361 DVNKLKGKGGGKFKYMPEK-DMLELAAKFAPYRSLFMWYMWRVTD 404
>gi|393758899|ref|ZP_10347718.1| DNA-3-methyladenine glycosylase II [Alcaligenes faecalis subsp.
faecalis NCIB 8687]
gi|393162795|gb|EJC62850.1| DNA-3-methyladenine glycosylase II [Alcaligenes faecalis subsp.
faecalis NCIB 8687]
Length = 416
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 68/188 (36%), Positives = 109/188 (57%), Gaps = 5/188 (2%)
Query: 80 DPLLATLIDAHRPPTFES---SRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNI 136
DP LI AH P R P+ +L +S++YQQL +A + I R + L+
Sbjct: 25 DPDWQALI-AHVGPCVHQPRPERDPYEALIRSVVYQQLHTRAVERILQRLLDLYPHGHCP 83
Query: 137 LPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDES-IVEMDDVTMFKMLTSVK 195
P+ VLA + LR G+S KA+ + LA+ DG++ D++ ++M + + + LT+++
Sbjct: 84 DPEEVLATPYETLRACGLSGAKATSIMGLAQARLDGLIPDQARAMQMSEKELIERLTTLR 143
Query: 196 GIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSV 255
GIG W+V M M+++L + D+LP D GVR+G + L L + P + E+ + W PYRSV
Sbjct: 144 GIGRWTVEMMMMYTLEREDILPADDFGVREGYRNLKRLDKAPSPRALREIAQAWAPYRSV 203
Query: 256 GSWYMWRL 263
SWY+WR+
Sbjct: 204 ASWYLWRM 211
>gi|296536054|ref|ZP_06898191.1| DNA-3-methyladenine glycosylase, partial [Roseomonas cervicalis
ATCC 49957]
gi|296263615|gb|EFH10103.1| DNA-3-methyladenine glycosylase [Roseomonas cervicalis ATCC 49957]
Length = 210
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 65/193 (33%), Positives = 110/193 (56%), Gaps = 2/193 (1%)
Query: 72 ALRHLRDKDPLLATLIDAHRPPTFES-SRSPFLSLAKSILYQQLAYKAAKSIYTRFVALF 130
A R DP+L ++ T R P+ +L ++I +QQ+ +AA+++ R +ALF
Sbjct: 2 AARAFLAADPVLGPVVRQVGAITLRPLQREPYEALVRAIAHQQVHGRAAEAMLNRLLALF 61
Query: 131 NGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGIL-SDESIVEMDDVTMFK 189
G+D P+ VLA+ + LR G S K + +RD+A K G++ + + + D + +
Sbjct: 62 PGQDFPHPEGVLALPEEALRGCGFSGAKVAAIRDIALKTVGGLVPTRRAAARLPDEALIE 121
Query: 190 MLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKW 249
L +++G+G W+V M +IF+L +PD+LPV D GVR+G ++ G P + + E W
Sbjct: 122 RLVALRGVGRWTVEMLLIFTLGRPDILPVDDFGVREGYRLATGADAQPKPKALAAIGEAW 181
Query: 250 KPYRSVGSWYMWR 262
P+RS +WY+WR
Sbjct: 182 APHRSAAAWYLWR 194
>gi|388569690|ref|ZP_10156079.1| HhH-GPD [Hydrogenophaga sp. PBC]
gi|388263113|gb|EIK88714.1| HhH-GPD [Hydrogenophaga sp. PBC]
Length = 212
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 69/194 (35%), Positives = 110/194 (56%), Gaps = 3/194 (1%)
Query: 72 ALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFN 131
A +HL +D ++ LI H +S F++LA+SI+ QQ++ KAA+S++ RF +L
Sbjct: 16 ACKHLMKRDRVMKKLIPRHPDVCLQSRGDAFVTLARSIVGQQISVKAAQSVWDRFESLTR 75
Query: 132 GEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKML 191
+ P VL + +R G+S RK YL DLA + D + EMDD + L
Sbjct: 76 ---KMTPAQVLKLKVDDMRASGLSARKVEYLVDLALHFADKRVRVSDWPEMDDEAIITEL 132
Query: 192 TSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKP 251
+++GIG W+ MF+IF L +P+VLP+ D+G++ G+ Y E ++ EV W P
Sbjct: 133 VAIRGIGRWTAEMFLIFHLMRPNVLPLDDIGLQTGISQAYFSGEPVSRSEIREVAGSWAP 192
Query: 252 YRSVGSWYMWRLME 265
+ SV +WY+WR ++
Sbjct: 193 FCSVATWYIWRSLD 206
>gi|406913132|gb|EKD52602.1| HhH-GPD [uncultured bacterium]
Length = 199
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 76/199 (38%), Positives = 113/199 (56%), Gaps = 2/199 (1%)
Query: 69 VDIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVA 128
+ +A +HL+ KDP L L+ + S F L +SI+ QQL+ KAA +I F+
Sbjct: 3 ITLAKKHLQ-KDPRLKPLLSKYTIEARGMSADLFRDLLESIIGQQLSVKAADTIIQCFMN 61
Query: 129 LFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMF 188
LF NI P+ +L LR +G+S +K SYLR L+E L ++++++ D +
Sbjct: 62 LFPDPKNIRPEDILGQDDGALRSVGLSRQKISYLRSLSEFIVSEKLILDALIDLPDELVI 121
Query: 189 KMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEK 248
LT VKGIG W+ M +IFSL + DV VGDLG+R + LYG+ K+EE+
Sbjct: 122 THLTMVKGIGRWTAEMMLIFSLGREDVFSVGDLGLRTAVSRLYGVDR-EDKTKIEEISRI 180
Query: 249 WKPYRSVGSWYMWRLMEAK 267
W PYRS+ S Y+W+ ++ K
Sbjct: 181 WSPYRSLASLYLWKSLDNK 199
>gi|94967733|ref|YP_589781.1| DNA-3-methyladenine glycosylase II [Candidatus Koribacter
versatilis Ellin345]
gi|94549783|gb|ABF39707.1| DNA-3-methyladenine glycosylase II [Candidatus Koribacter
versatilis Ellin345]
Length = 251
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 81/210 (38%), Positives = 117/210 (55%), Gaps = 17/210 (8%)
Query: 72 ALRHLRDKDPLLATLIDAHRPPTFESS--RSPFLSLAKSILYQQLAYKAAKSIYTRFVAL 129
A+ HL D LA LI P + + ++ F +L +SI+YQQL+ KAA +I R AL
Sbjct: 8 AIAHLSKVDKKLAKLIAKCPPCAIKPNYMQNVFEALMESIVYQQLSGKAAATILNRVKAL 67
Query: 130 FNGEDNIL-------------PDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSD 176
+ D P+ +LA + LR G+S K ++DLA K DG + D
Sbjct: 68 YFPPDTPTHDTRHGKALPFPTPEQLLATPDETLRSAGLSGNKTKSVKDLAAKTIDGTVPD 127
Query: 177 -ESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKE 235
++ +M D + LT V+GIG W+V M ++F+L + DV PV DLGVRKG L+G+ E
Sbjct: 128 IATMKKMSDDEIINHLTQVRGIGRWTVEMILLFNLFRKDVWPVDDLGVRKGYGYLHGI-E 186
Query: 236 LPGALKMEEVCEKWKPYRSVGSWYMWRLME 265
+P ++ + E +KPYRSV +WYMWR E
Sbjct: 187 MPKPKELMALGEVYKPYRSVAAWYMWRACE 216
>gi|399576577|ref|ZP_10770332.1| HhH-GPD family protein [Halogranum salarium B-1]
gi|399238021|gb|EJN58950.1| HhH-GPD family protein [Halogranum salarium B-1]
Length = 183
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 63/176 (35%), Positives = 104/176 (59%), Gaps = 3/176 (1%)
Query: 86 LIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNILPDAVLAVS 145
L++ H P E S F L SI+ QQL+ +A ++ R + +GE + P+ VLA
Sbjct: 4 LVETH-DPYVEPDWSEFERLCISIINQQLSTASAAAVKERVFEVLDGE--VTPETVLAAD 60
Query: 146 PQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIGAWSVHMF 205
+ LR+ G+S K Y+++ A + + + +++ +DD + LT +KG+G W+ M+
Sbjct: 61 EESLRDAGLSRMKVDYIQNAARAFQESDFTQDAMAALDDDEVVARLTEIKGVGDWTARMY 120
Query: 206 MIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSWYMW 261
++F L +PDVLP+GDL VRKG++ LY +M E+ E+W+PYRSV + Y+W
Sbjct: 121 LLFVLERPDVLPLGDLAVRKGIEQLYADGGELTRAEMREIAEEWRPYRSVATRYIW 176
>gi|330936529|ref|XP_003305427.1| hypothetical protein PTT_18264 [Pyrenophora teres f. teres 0-1]
gi|311317568|gb|EFQ86487.1| hypothetical protein PTT_18264 [Pyrenophora teres f. teres 0-1]
Length = 438
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 78/204 (38%), Positives = 106/204 (51%), Gaps = 18/204 (8%)
Query: 80 DPLLATLIDAHR-----PPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGED 134
DP + L+ H P PF +L+ I+ QQ++ KAA SI +F ALF
Sbjct: 226 DPKMEALVKKHHCEIFSPEGLREVVDPFTALSSGIIGQQVSGKAASSIRAKFTALFPTTH 285
Query: 135 NILPD--AVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLT 192
P VL + LR G+S RKA Y+ LAEK+ G LS E IV D + + L
Sbjct: 286 PAFPTPTQVLQLDIPTLRTAGLSQRKAEYITGLAEKFCSGELSAEMIVSASDEELIEKLV 345
Query: 193 SVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYG-----LKELPGALK------ 241
+V+G+G WSV MF F L + DV GDLGV++G+ V G LK G K
Sbjct: 346 AVRGLGRWSVEMFACFGLKRMDVFSTGDLGVQRGMAVYAGRDVNKLKAKGGKWKYMTERE 405
Query: 242 MEEVCEKWKPYRSVGSWYMWRLME 265
M ++ K+ PYRS+ WYMWR+++
Sbjct: 406 MLDIAAKFSPYRSLFMWYMWRIVD 429
>gi|395010948|ref|ZP_10394252.1| HhH-GPD superfamily base excision DNA repair protein, partial
[Acidovorax sp. CF316]
gi|394310947|gb|EJE48378.1| HhH-GPD superfamily base excision DNA repair protein, partial
[Acidovorax sp. CF316]
Length = 230
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 71/199 (35%), Positives = 111/199 (55%), Gaps = 3/199 (1%)
Query: 72 ALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFN 131
A +HL KD ++ LI ++ F +LA+SI+ QQ++ KAA++++ RF L
Sbjct: 33 ACKHLMKKDRVMKRLIPQFGDAALQTQGDAFTTLARSIVGQQISVKAAQTVWERFAKL-- 90
Query: 132 GEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKML 191
++ P VL + +R G+S RK YL DLA + G L + MDD + L
Sbjct: 91 -PRSMKPANVLKLKVDDMRAAGLSARKVDYLVDLALHFDGGKLHVKDWASMDDEAIIAEL 149
Query: 192 TSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKP 251
+++GIG W+ MF+IF L +P+VLP+ D+G+ G+ Y E + EV E WKP
Sbjct: 150 VAIRGIGRWTAEMFLIFYLMRPNVLPLDDVGLISGISHNYFSGETVSRSEAREVAEAWKP 209
Query: 252 YRSVGSWYMWRLMEAKGVL 270
+ SV +WY+WR M+ + V+
Sbjct: 210 WASVATWYIWRSMDPQPVV 228
>gi|347818557|ref|ZP_08871991.1| HhH-GPD family protein [Verminephrobacter aporrectodeae subsp.
tuberculatae At4]
Length = 217
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 67/194 (34%), Positives = 110/194 (56%), Gaps = 3/194 (1%)
Query: 72 ALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFN 131
A +HL KD ++ LI ++ F +LA+SI+ QQ++ KAA++++ RF AL
Sbjct: 21 ACKHLMKKDRVMKRLISQSGDVALQTRGDAFTTLARSIVGQQISVKAAQTVWERFAALLR 80
Query: 132 GEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKML 191
++ P +VL + + +R G+S RK YL LA + G + + V MDD + L
Sbjct: 81 ---SMQPASVLGLRAEDMRAAGLSARKVDYLLALALHFEQGRVHVQDWVAMDDEAIIAEL 137
Query: 192 TSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKP 251
+++GIG W+ MF+IF L +P+VLP+ D+G+ G+ Y + EV E W+P
Sbjct: 138 VAIRGIGRWTAEMFLIFHLMRPNVLPLDDVGLLNGISRSYFSGDPVSRSDAREVAEAWRP 197
Query: 252 YRSVGSWYMWRLME 265
+ SV +WY+WR ++
Sbjct: 198 WCSVATWYIWRSLD 211
>gi|448611986|ref|ZP_21662416.1| DNA-3-methyladenine glycosylase [Haloferax mucosum ATCC BAA-1512]
gi|445742747|gb|ELZ94241.1| DNA-3-methyladenine glycosylase [Haloferax mucosum ATCC BAA-1512]
Length = 193
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 72/194 (37%), Positives = 107/194 (55%), Gaps = 7/194 (3%)
Query: 70 DIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVAL 129
D A R L+ DP L +++ H P + + + PF L SI+ QQL+ AA +I R
Sbjct: 3 DDAYRELK-CDPHLGDVVEEHGPLSLDPADDPFERLVVSIVNQQLSTSAAATIRDRLFER 61
Query: 130 FNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFK 189
+ P +LA L + G+S +K Y+R++AE + DG S ES+ MDD +
Sbjct: 62 VE----VTPAGLLAADEAVLGDCGLSNQKIGYVRNVAEAFQDG-FSAESLRAMDDDDVID 116
Query: 190 MLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLK-ELPGALKMEEVCEK 248
LT ++G+G W+ MF+IF L + DV PV DLG+R+G++ ++G + M E K
Sbjct: 117 SLTEIRGVGVWTAKMFLIFVLAREDVFPVEDLGIRRGMERVFGFDVDTVSRGTMRERAAK 176
Query: 249 WKPYRSVGSWYMWR 262
W PYRS S Y+WR
Sbjct: 177 WTPYRSYASLYLWR 190
>gi|307729280|ref|YP_003906504.1| HhH-GPD family protein [Burkholderia sp. CCGE1003]
gi|307583815|gb|ADN57213.1| HhH-GPD family protein [Burkholderia sp. CCGE1003]
Length = 368
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 66/196 (33%), Positives = 110/196 (56%), Gaps = 3/196 (1%)
Query: 70 DIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVAL 129
D A L +D +L LI P S PF++LA+S++ QQ++ +A++++ + A
Sbjct: 170 DKACADLVKRDRILKKLIPKFGPVHLLSRGDPFVTLARSVVGQQISVASAQAVWAKVAAA 229
Query: 130 FNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFK 189
++P + + ++L G+S RKA Y+ DLA+ + G L M+D +
Sbjct: 230 C---PKLVPQQFIKLGQEKLTACGLSKRKAEYVLDLAQHFVSGALHVGKWRSMEDEAVIA 286
Query: 190 MLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKW 249
LT ++GIG W+ MF+IF+L +PDVLP+ DLG+ + + V Y E + EV W
Sbjct: 287 ELTQIRGIGRWTAEMFLIFNLSRPDVLPLDDLGLIRAISVNYFSGEPVTRSEAREVAANW 346
Query: 250 KPYRSVGSWYMWRLME 265
+P+R+V +WYMWR ++
Sbjct: 347 EPWRTVATWYMWRSLD 362
>gi|374312617|ref|YP_005059047.1| HhH-GPD family protein [Granulicella mallensis MP5ACTX8]
gi|358754627|gb|AEU38017.1| HhH-GPD family protein [Granulicella mallensis MP5ACTX8]
Length = 224
Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 77/215 (35%), Positives = 116/215 (53%), Gaps = 9/215 (4%)
Query: 55 NSPKIFKPLTFKGEVDIALRHLRDKDPLLATLIDAHRPPTF--ESSRSPFLSLAKSILYQ 112
++P K T G A RHL D L+ P T + +R P+ +L ++I YQ
Sbjct: 5 STPGNGKLSTESGPFHAATRHLASIDIDWRRLVKQVGPCTHLPKPAREPYEALIRAIAYQ 64
Query: 113 QLAYKAAKSIYTRFVALFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDG 172
QL KA +I T+F+ALF PD +LA LR G S RK +R++A G
Sbjct: 65 QLHAKAGDAILTKFMALFGEPKFPSPDRILAADFDSLRACGFSGRKIETIREIASGSLSG 124
Query: 173 ILSDESIVE-MDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLY 231
++ + + M D + L ++KGIG W+V MF+I++L + DVLP D GVR+G + L
Sbjct: 125 LVPGRTSADKMSDEDLISRLVTLKGIGRWTVEMFLIYTLERMDVLPADDFGVREGHRRL- 183
Query: 232 GLKELPGALKMEEVC---EKWKPYRSVGSWYMWRL 263
K LP A +E+ ++W PYR++ +WY+WR+
Sbjct: 184 --KSLPKAFSAKEIAREGQRWSPYRTIAAWYLWRV 216
>gi|94310031|ref|YP_583241.1| 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase
[Cupriavidus metallidurans CH34]
gi|93353883|gb|ABF07972.1| 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase
[Cupriavidus metallidurans CH34]
Length = 261
Score = 131 bits (329), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 68/196 (34%), Positives = 110/196 (56%), Gaps = 3/196 (1%)
Query: 70 DIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVAL 129
D A L +D +L +I + P S PF++LA+SI+ QQ++ KAA+S++ R A
Sbjct: 63 DEACADLMKRDRILRKMIPTYGPAHLVSRGDPFVTLARSIVGQQISVKAAQSVWERLAAR 122
Query: 130 FNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFK 189
+ P L ++L G+S RKA Y+ DLA+ + G + + V MDD +
Sbjct: 123 C---PRLTPAQFLKSGSEELAGCGLSKRKAEYIIDLADHFKAGRVHVKEWVAMDDEAVIA 179
Query: 190 MLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKW 249
LT ++GIG W+ MF++F+L +P+VLP+ D+G+ + Y E + EV W
Sbjct: 180 ELTQIRGIGRWTAEMFLMFNLMRPNVLPLDDVGLINAISTNYFSGEPVTRSEAREVAANW 239
Query: 250 KPYRSVGSWYMWRLME 265
+P+R+V +WYMWR ++
Sbjct: 240 EPWRTVATWYMWRSLD 255
>gi|393235153|gb|EJD42710.1| DNA glycosylase [Auricularia delicata TFB-10046 SS5]
Length = 440
Score = 131 bits (329), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 86/240 (35%), Positives = 123/240 (51%), Gaps = 15/240 (6%)
Query: 2 KKPNHTSDNISQNPSASSKITFPPRKIRKLTTITPITKIAEIPVATAISTNSDNSPKIFK 61
K+ D+I + S P RK R T A + I+ P++
Sbjct: 45 KRARAVDDSIGDASVSESAPATPKRKPRSTAATPRKTPSANVGEPVTITVPRGAEPELV- 103
Query: 62 PLTFKGEVDIALRHLRDKDPLLATLID--AHRPPTFESSRSPFLSLAKSILYQQLAYKAA 119
P ++D+A HL DP A L + A +P ++ PF +L+ SIL QQ++ AA
Sbjct: 104 PAQLTFDLDVAQAHLIKADPRFAELFERRACKPFVHLNTVDPFRTLSTSILSQQISTLAA 163
Query: 120 KSIYTRFVALF---------NGED-NILPDA--VLAVSPQQLREIGVSYRKASYLRDLAE 167
+SI RF ++ NG+ ++ P A V A LR G+S RKA YL DLA
Sbjct: 164 RSIGHRFCRMYDPSLPEKYENGQTWDLFPTAQQVAATPLPALRSAGLSARKAEYLHDLAA 223
Query: 168 KYTDGILSDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGL 227
+ DG ++ + E D + +ML +V+GIG W+VHMF +FSL PD+LPVGDLGV+KGL
Sbjct: 224 HFADGRITTHKLREATDTELSEMLIAVRGIGPWTVHMFALFSLRHPDILPVGDLGVQKGL 283
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 35/57 (61%), Gaps = 5/57 (8%)
Query: 213 PDVLPVGDLGVRKGLQVLYGLKELPGAL----KMEEVCEKWKPYRSVGSWYMWRLME 265
P +LP G L V + L G ++ GA+ +ME + E WKPYRS+G WYMW L++
Sbjct: 383 PILLPEG-LSVAQLRSRLTGKTKVKGAILTPAEMEHLTEAWKPYRSLGVWYMWALLD 438
>gi|381209691|ref|ZP_09916762.1| DNA-3-methyladenine glycosidase [Lentibacillus sp. Grbi]
Length = 217
Score = 131 bits (329), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 73/197 (37%), Positives = 118/197 (59%), Gaps = 8/197 (4%)
Query: 72 ALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFN 131
A+ L+ D + LID T F SL +SI+ QQ++ +AA +I+ R AL
Sbjct: 12 AVNQLKAADQQMNKLIDIVGDVTVSMRPDYFKSLVRSIIGQQISVQAASTIFGRLEALLE 71
Query: 132 GEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKML 191
G I P+A+L VS +QLR IG+S +K +YLRDL K D + + +MD+ ++ K+L
Sbjct: 72 GL--IEPEAILKVSDEQLRTIGLSRQKVNYLRDLTAKVHDKTIDFAQMDDMDNRSVIKLL 129
Query: 192 TSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEK--- 248
TS+KGIG W+ MF+IFSL + +VL V D+G+++G + LY E+ + + + +K
Sbjct: 130 TSIKGIGKWTAEMFLIFSLGRMNVLAVDDIGIQRGAKWLY---EVDKSERRRILLDKKPV 186
Query: 249 WKPYRSVGSWYMWRLME 265
W P+ ++ S+Y+W ++
Sbjct: 187 WDPHLTIASFYLWEVVH 203
>gi|74318454|ref|YP_316194.1| 3-methyl-adenine DNA glycosylase [Thiobacillus denitrificans ATCC
25259]
gi|74057949|gb|AAZ98389.1| 3-methyladenine DNA glycosylase II [Thiobacillus denitrificans ATCC
25259]
Length = 208
Score = 131 bits (329), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 72/196 (36%), Positives = 109/196 (55%), Gaps = 7/196 (3%)
Query: 72 ALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFN 131
A L DP++A LI + + PF +LA++I+ QQ++ KAA SI+ RF AL
Sbjct: 12 ACSELTAADPVMAGLIARYPDCVLGNRGDPFQTLARAIVGQQISVKAADSIWARFAALME 71
Query: 132 GEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKML 191
+ P ++A+ L G+S RK YL DLA + DG + MDD + L
Sbjct: 72 A---VAPARLVALDRDTLATCGLSRRKVEYLVDLAGHFIDGRVEPSRWKRMDDEDVIAEL 128
Query: 192 TSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRK--GLQVLYGLKELPGALKMEEVCEKW 249
V+GIG W+ MF+IF+L +PDV PV D+G++K L L G++ P L+ E+
Sbjct: 129 VDVRGIGRWTAEMFLIFNLQRPDVWPVDDIGLQKAVALHYLEGVRPTPKVLRAHG--ERH 186
Query: 250 KPYRSVGSWYMWRLME 265
P+R+V +WY+WR ++
Sbjct: 187 APWRTVATWYLWRSLD 202
>gi|15790351|ref|NP_280175.1| 3-methyladenine DNA glycosylase [Halobacterium sp. NRC-1]
gi|169236084|ref|YP_001689284.1| DNA-3-methyladenine glycosidase I [Halobacterium salinarum R1]
gi|10580829|gb|AAG19655.1| 3-methyladenine DNA glycosylase [Halobacterium sp. NRC-1]
gi|167727150|emb|CAP13936.1| DNA N-glycosylase [Halobacterium salinarum R1]
Length = 191
Score = 131 bits (329), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 67/187 (35%), Positives = 104/187 (55%), Gaps = 6/187 (3%)
Query: 80 DPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNILPD 139
DP LA L+DAH F L +I+ QQL+ AA +I R +F+ D + P
Sbjct: 11 DPTLAPLLDAHGELAVTPHDDLFERLVVAIIRQQLSTDAAATIRER---VFDAVD-VTPA 66
Query: 140 AVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIGA 199
+ A P LR+ G+S +K Y+ ++A + + + E+ D + + LT++ G+G
Sbjct: 67 GIAAADPAVLRDAGLSRQKTDYVTNVAAAFREHDYTRARFAELSDAAVREELTAITGVGD 126
Query: 200 WSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSWY 259
W+ MF++F+L + DV PVGDLG+R G+Q LYG +M E+ + W+PYRS S Y
Sbjct: 127 WTASMFLLFALGRADVFPVGDLGIRTGMQALYGADTTRA--EMREIADSWRPYRSYASLY 184
Query: 260 MWRLMEA 266
+WR +A
Sbjct: 185 VWRAQDA 191
>gi|378729266|gb|EHY55725.1| DNA-3-methyladenine glycosylase II [Exophiala dermatitidis
NIH/UT8656]
Length = 397
Score = 130 bits (328), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 78/214 (36%), Positives = 114/214 (53%), Gaps = 22/214 (10%)
Query: 72 ALRHLRDKDPLLATLIDAHRPPTFESSR-----SPFLSLAKSILYQQLAYKAAKSIYTRF 126
A HL DP TLI+ H F + PF SLA SI+ QQ++ AAKSI +F
Sbjct: 172 ACNHLISVDPRFKTLIEKHPCHLFSAKGLAEQIDPFRSLASSIMGQQVSGAAAKSIRNKF 231
Query: 127 VALFN--GEDNI---LPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVE 181
+ALFN G D P V A +LR G+S RKA Y++ LA+K+ G L+ + ++
Sbjct: 232 IALFNEEGTDQARFPTPAQVAATDIARLRLAGLSQRKAEYIQGLAQKFATGELTADLLMR 291
Query: 182 MDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYG--------- 232
D + + L +V+G+G WSV MF F L + D+L GDLGV++G+ +G
Sbjct: 292 ATDEEVMEKLIAVRGLGKWSVEMFACFGLKRLDILSTGDLGVQRGMAAFFGKDVKKLKAK 351
Query: 233 LKELPGALKMEEVCEK---WKPYRSVGSWYMWRL 263
+ +++ +K + PYRS+ WYMWR+
Sbjct: 352 GGGKWKYMSEQDMLDKSAPFAPYRSLFMWYMWRV 385
>gi|448339057|ref|ZP_21528088.1| HhH-GPD family protein [Natrinema pallidum DSM 3751]
gi|445621028|gb|ELY74514.1| HhH-GPD family protein [Natrinema pallidum DSM 3751]
Length = 196
Score = 130 bits (328), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 66/186 (35%), Positives = 106/186 (56%), Gaps = 4/186 (2%)
Query: 76 LRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDN 135
LRD DP++A L+D H P E + + L SI+ QQL+ +A ++ R L G +
Sbjct: 9 LRD-DPVMAALVDRH-DPYVEPDWNEYERLCISIINQQLSTASAAAVRERVFDLLEG--D 64
Query: 136 ILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVK 195
+ P VLA LR+ G+S K Y+R+ A + + + + + + +LT +K
Sbjct: 65 VTPATVLAADEAALRDAGLSRSKVEYIRNAARAFQETDYTRAGLASYANDEVIDLLTEIK 124
Query: 196 GIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSV 255
G+GAW+ M+++F L +PDVLP+GDL VR+G++ LY + +M E+ E W+PYRS
Sbjct: 125 GVGAWTARMYLLFVLERPDVLPLGDLAVRRGIEELYADGDELTRAEMREIAEPWRPYRSA 184
Query: 256 GSWYMW 261
+ Y+W
Sbjct: 185 ATRYIW 190
>gi|398868043|ref|ZP_10623469.1| HhH-GPD superfamily base excision DNA repair protein [Pseudomonas
sp. GM78]
gi|398234613|gb|EJN20476.1| HhH-GPD superfamily base excision DNA repair protein [Pseudomonas
sp. GM78]
Length = 205
Score = 130 bits (328), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 67/191 (35%), Positives = 111/191 (58%), Gaps = 10/191 (5%)
Query: 74 RHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGE 133
RH+ P L H+P ++R P+ SL ++I YQQL KA +I R +AL+
Sbjct: 21 RHIAAVGPCL------HQP---HAARDPYESLVRAIAYQQLHAKAGDAIIGRLLALYPSV 71
Query: 134 DNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSD-ESIVEMDDVTMFKMLT 192
P+ ++A +LR G S K + ++ +A+ +G++ D + + MDD + + L
Sbjct: 72 AFPRPEQIVATDFDRLRSCGFSASKIATIQGIAQAALEGVVPDYATALAMDDEALIERLV 131
Query: 193 SVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPY 252
+++G+G W+V M +I+SL +PD+LP D GVR+G + L GL+ P +M E+ W PY
Sbjct: 132 TLRGVGRWTVEMLLIYSLERPDILPADDFGVREGYRRLKGLEVQPMRKQMIEIGLAWSPY 191
Query: 253 RSVGSWYMWRL 263
R+V +WY+WR+
Sbjct: 192 RTVAAWYLWRV 202
>gi|237745446|ref|ZP_04575926.1| DNA-3-methyladenine glycosylase II [Oxalobacter formigenes HOxBLS]
gi|229376797|gb|EEO26888.1| DNA-3-methyladenine glycosylase II [Oxalobacter formigenes HOxBLS]
Length = 214
Score = 130 bits (328), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 69/211 (32%), Positives = 116/211 (54%), Gaps = 7/211 (3%)
Query: 52 NSDNSPKIFKPLTFKGEVDIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILY 111
N D++ + +P G + A R L +DP+L +L+ PF +L +SI+
Sbjct: 2 NGDHALSLDEP----GIWECACRELAQRDPVLKSLMLEPDRGRLTRRGEPFQTLVRSIVG 57
Query: 112 QQLAYKAAKSIYTRFVALFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTD 171
QQ++ KAA SI+ RF + G P+ + L+ G+S RK YL+DLA + +
Sbjct: 58 QQISVKAADSIWQRFREVCPG---CTPEEIAGAESGSLKASGLSKRKTEYLKDLAFHFLE 114
Query: 172 GILSDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLY 231
+ + M D + LT ++GIG W+ MF+IF+L +PD+LP+ D+G++KG+ + Y
Sbjct: 115 RKIQPDRWGNMTDEEVIADLTRIRGIGRWTAEMFLIFNLLRPDILPLDDVGLQKGVSMAY 174
Query: 232 GLKELPGALKMEEVCEKWKPYRSVGSWYMWR 262
E + ++ + WKP+R+V +WY+WR
Sbjct: 175 FSGEPVSGNDIRKIAKNWKPWRTVATWYLWR 205
>gi|70994738|ref|XP_752146.1| DNA-3-methyladenine glycosylase [Aspergillus fumigatus Af293]
gi|66849780|gb|EAL90108.1| DNA-3-methyladenine glycosylase, putative [Aspergillus fumigatus
Af293]
gi|159124939|gb|EDP50056.1| DNA-3-methyladenine glycosylase, putative [Aspergillus fumigatus
A1163]
Length = 382
Score = 130 bits (328), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 100/294 (34%), Positives = 143/294 (48%), Gaps = 39/294 (13%)
Query: 6 HTSDNISQNPSASSKITFPP--RKIR----KLTTITP--ITKIAEIPVATAISTNSDNSP 57
+T D IS +P + T PP R + T +TP + +A P + ++S + P
Sbjct: 82 NTLDLISTDPPSRLHATPPPLDRPVEPHRTNATLLTPHGSSLVAYPPGSESLSPSKTGRP 141
Query: 58 KIFKPLTFKGEV-DIALRHLRDKDPLLATLIDAHRPPTFESSR-----SPFLSLAKSILY 111
+ P G + + A+ HL D L LI H P F PF SL SI+
Sbjct: 142 R---PTATTGTLLEKAVAHLIATDARLEPLIRRHPCPLFSPEGLAEEIDPFRSLVSSIIG 198
Query: 112 QQLAYKAAKSIYTRFVALFN----GEDNI------LPDAVLAVSPQQLREIGVSYRKASY 161
QQ++ AA+SI +FVALFN G+D P+ V+ LR G+S RKA Y
Sbjct: 199 QQVSGAAARSIKDKFVALFNKDNEGQDPAKPPRFPTPEEVVQCDLATLRTAGLSQRKAEY 258
Query: 162 LRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDL 221
+ L++K+ G LS ++ D + + LT+V+G+G WSV MF F+L + DV GDL
Sbjct: 259 IHGLSQKFATGELSARMLLNASDEELVEKLTAVRGLGRWSVEMFACFALKRIDVFSTGDL 318
Query: 222 GVRKGLQVLYG-----LKELPGA-------LKMEEVCEKWKPYRSVGSWYMWRL 263
GV++G G LK G M E+ K+ PYRS+ WYMWR+
Sbjct: 319 GVQRGCAAFMGKDVSKLKAKGGGKFKYMAEKDMLELAAKFAPYRSLFMWYMWRV 372
>gi|456063199|ref|YP_007502169.1| HhH-GPD family protein [beta proteobacterium CB]
gi|455440496|gb|AGG33434.1| HhH-GPD family protein [beta proteobacterium CB]
Length = 218
Score = 130 bits (328), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 66/194 (34%), Positives = 108/194 (55%), Gaps = 2/194 (1%)
Query: 72 ALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFN 131
A L D +L LI H + F +LA+SI+ QQ++ AA+S++ + L
Sbjct: 21 ACAELMKHDRILKKLIPKHGSVFLRTRGDAFTTLARSIVGQQISVAAAQSVWNK--TLLA 78
Query: 132 GEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKML 191
++ + P +LA+S ++LR G+S RK Y+RDLAE + G L M+D + K L
Sbjct: 79 AKNKVNPKNILALSVEELRAAGLSGRKVEYIRDLAEHFNSGRLHANQWKGMEDEAIIKEL 138
Query: 192 TSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKP 251
++GIG W+ MF+IF++ +P++LP+ D G+ K + + Y E + EV W P
Sbjct: 139 CEIRGIGRWTAEMFLIFNMVRPNILPLDDAGLIKAISLNYFSGEPVSRHEAREVAANWAP 198
Query: 252 YRSVGSWYMWRLME 265
+ +V +WYMWR ++
Sbjct: 199 WCTVATWYMWRSLD 212
>gi|435846543|ref|YP_007308793.1| HhH-GPD superfamily base excision DNA repair protein [Natronococcus
occultus SP4]
gi|433672811|gb|AGB37003.1| HhH-GPD superfamily base excision DNA repair protein [Natronococcus
occultus SP4]
Length = 196
Score = 130 bits (328), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 63/189 (33%), Positives = 108/189 (57%), Gaps = 3/189 (1%)
Query: 79 KDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNILP 138
+DP++A L+D H P E S + L SI+ QQ++ +A +I R + +GE + P
Sbjct: 11 QDPVMAELVDRH-DPYVEPDWSEYERLCISIINQQVSTASAAAIRERVFDVLDGE--VTP 67
Query: 139 DAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIG 198
++VLA LR+ G+S K Y+R+ A + + + + + + LT ++GIG
Sbjct: 68 ESVLAADEAALRDAGLSPSKVEYVRNAARAFQENDYTRAGFADQTNAEVVDALTEIRGIG 127
Query: 199 AWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSW 258
W+ M+++F L +PD+LP+GDL VR+G++ LY + +M E+ W+PYRSV +
Sbjct: 128 EWTARMYLLFVLERPDILPLGDLAVRRGIENLYADGDELTRAEMREIAADWRPYRSVATR 187
Query: 259 YMWRLMEAK 267
Y+W E++
Sbjct: 188 YIWAEYESE 196
>gi|448296761|ref|ZP_21486812.1| HhH-GPD family protein [Halalkalicoccus jeotgali B3]
gi|445580744|gb|ELY35118.1| HhH-GPD family protein [Halalkalicoccus jeotgali B3]
Length = 197
Score = 130 bits (328), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 67/192 (34%), Positives = 107/192 (55%), Gaps = 3/192 (1%)
Query: 75 HLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGED 134
HLRD DP++A LI+ + P F L S++ Q ++ AA ++ R LF+G
Sbjct: 8 HLRD-DPVMARLIEEYDPYAEPEWGEEFERLVVSVISQSISTAAASAVRERVYELFDG-- 64
Query: 135 NILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSV 194
I P+AVLA +L G + Y+ + AE + + L+ E + + D + + LT +
Sbjct: 65 PITPEAVLATDDDELAAAGFGTQNTEYVNNAAEAFLERDLTREGLADHTDREVIEELTRI 124
Query: 195 KGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRS 254
+GIG W+ M+++F L + DVLP+GDL VR+G++ LY E +M E+ + W+PYRS
Sbjct: 125 RGIGEWTARMYLLFVLEREDVLPLGDLAVRRGIETLYNDGEELTREEMTEIAKAWRPYRS 184
Query: 255 VGSWYMWRLMEA 266
G+ Y+W E
Sbjct: 185 TGTKYVWAAYEG 196
>gi|170723639|ref|YP_001751327.1| DNA-3-methyladenine glycosylase II [Pseudomonas putida W619]
gi|169761642|gb|ACA74958.1| DNA-3-methyladenine glycosylase II [Pseudomonas putida W619]
Length = 208
Score = 130 bits (328), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 71/213 (33%), Positives = 118/213 (55%), Gaps = 12/213 (5%)
Query: 53 SDNSPKIFKPLTFKGEVDIALRHLRDKDPLLATLIDAHRPPTFESS--RSPFLSLAKSIL 110
+D SP+ ++ T +L DP A I A P +++ R P+ +L ++I
Sbjct: 4 ADLSPEAYREAT---------DYLAALDPDWARHITATGPCLHQATPGREPYEALVRAIA 54
Query: 111 YQQLAYKAAKSIYTRFVALFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYT 170
YQQL +AA++I R +ALF + P +L V+P+ +R G S K + + +A+
Sbjct: 55 YQQLHARAAEAILGRLLALFPDDGFPAPRQLLEVAPETMRTCGFSASKLATIHGIAQAAL 114
Query: 171 DGIL-SDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQV 229
DG + E + M D + + L +++G+G W+V M +I+SL + DVLPV D VR+G +
Sbjct: 115 DGAVPCREEALGMSDEALIERLVALRGVGRWTVEMLLIYSLERSDVLPVDDFAVREGYRR 174
Query: 230 LYGLKELPGALKMEEVCEKWKPYRSVGSWYMWR 262
L GL + P +M + W+P+R+V +WY+WR
Sbjct: 175 LKGLGKAPTPAQMRSLGAGWRPHRTVAAWYLWR 207
>gi|344167042|emb|CCA79233.1| putative DNA-3-methyladenine glycosylase II [blood disease
bacterium R229]
Length = 300
Score = 130 bits (327), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 67/194 (34%), Positives = 109/194 (56%), Gaps = 3/194 (1%)
Query: 72 ALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFN 131
A L +D +L +I A P S PF++LA+SI+ QQ++ KAA+S++ R V
Sbjct: 105 ACADLMKRDRILRKIIPAFGPAHLASRGDPFVTLARSIVGQQISVKAAQSVWERLV---E 161
Query: 132 GEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKML 191
++P L ++L G+S RKA Y+ DLAE + +G + EM+D + L
Sbjct: 162 ACPKLVPAQFLRAGHEKLAGCGLSKRKAEYILDLAEHFRNGTVHVAKWAEMEDEDVIAEL 221
Query: 192 TSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKP 251
T ++GI W+ MF++F+L +P+VLP+ D+G+ + Y E + EV W+P
Sbjct: 222 TQIRGIVRWTAEMFLMFNLLRPNVLPLDDIGLINAISQNYFSGEPVTRSEAREVAANWEP 281
Query: 252 YRSVGSWYMWRLME 265
+R+V +WYMWR ++
Sbjct: 282 WRTVATWYMWRSLD 295
>gi|148927672|ref|ZP_01811125.1| DNA-3-methyladenine glycosylase II [candidate division TM7
genomosp. GTL1]
gi|147886984|gb|EDK72499.1| DNA-3-methyladenine glycosylase II [candidate division TM7
genomosp. GTL1]
Length = 239
Score = 130 bits (327), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 75/215 (34%), Positives = 121/215 (56%), Gaps = 18/215 (8%)
Query: 49 ISTNSDNSPKIFKPLTFKGEVDIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKS 108
I TNS + +I EV +A+ +D L LI A P F +L +S
Sbjct: 30 IMTNSALATQIAA-----AEVTLAI-----QDTKLGALIAAQAPLNRLRKGDYFANLVRS 79
Query: 109 ILYQQLAYKAAKSIYTRFVALFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEK 168
I+ QQ++ A+++I R A E P +LA++P++LR +G+S KA Y+ DLAE
Sbjct: 80 IISQQVSVAASRAILARVQAATGLE----PKRILALNPEELRALGLSRPKAGYISDLAEH 135
Query: 169 YTD--GILSDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKG 226
+ GI + + + D + LT +KGIGAW+ MF++F+L + D+ D+G+++
Sbjct: 136 FVREPGIF--DHLERLADDEVITELTRIKGIGAWTAQMFLMFTLGRLDIFAPDDVGLQRA 193
Query: 227 LQVLYGLKELPGALKMEEVCEKWKPYRSVGSWYMW 261
+ LYGLKE+P ++E + E W+PYR+V SW++W
Sbjct: 194 ITRLYGLKEVPSRTQLEALAEAWRPYRTVASWHLW 228
>gi|70730029|ref|YP_259768.1| DNA-3-methyladenine glycosylase [Pseudomonas protegens Pf-5]
gi|68344328|gb|AAY91934.1| DNA-3-methyladenine glycosylase [Pseudomonas protegens Pf-5]
Length = 203
Score = 130 bits (327), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 63/175 (36%), Positives = 102/175 (58%), Gaps = 4/175 (2%)
Query: 90 HRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNILPDAVLAVSPQQL 149
H+P R P+ +L +++ YQQL +A +I R ALF G+D P + A S + L
Sbjct: 29 HQP---RPEREPYQALVRAVAYQQLHARAGDAILGRLRALFPGQDFPTPGQLAAASLESL 85
Query: 150 REIGVSYRKASYLRDLAEKYTDGILSDE-SIVEMDDVTMFKMLTSVKGIGAWSVHMFMIF 208
R G S RK + L+ +A+ DG + D S +DD + + L + GIG W+V M +I+
Sbjct: 86 RGCGFSARKVATLQGIAQATLDGRVPDAASARGLDDEQLIERLIQLPGIGRWTVEMLLIY 145
Query: 209 SLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSWYMWRL 263
SL + D+LPV D GVR+G + L L++ P ++ ++ + W P+R+ +WY+WR+
Sbjct: 146 SLEREDILPVDDFGVREGYRRLKDLEKQPSPRQLRQIGQAWSPWRTTAAWYLWRV 200
>gi|389683838|ref|ZP_10175169.1| DNA-3-methyladenine glycosylase [Pseudomonas chlororaphis O6]
gi|388552177|gb|EIM15439.1| DNA-3-methyladenine glycosylase [Pseudomonas chlororaphis O6]
Length = 205
Score = 130 bits (327), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 69/187 (36%), Positives = 109/187 (58%), Gaps = 3/187 (1%)
Query: 80 DPLLATLIDAHRPPTFES--SRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNIL 137
DP A +DA P ++ +R P +L ++I YQQL +A +I RF+ L+
Sbjct: 16 DPDWARHVDAVGPCLHQAKPAREPCEALVRAIAYQQLHARAGDAILGRFLGLYGQGTFPS 75
Query: 138 PDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSD-ESIVEMDDVTMFKMLTSVKG 196
P+ +LA +QLR G S K + +R +AE G + D ++ MDD + + LTS++G
Sbjct: 76 PEQILATDFEQLRACGFSAGKIATIRGIAEATLSGAVPDYQAARAMDDEALIERLTSLRG 135
Query: 197 IGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVG 256
IG W+V M +I+SL + D+LP D GVR+G + L GL+ P +M E+ +P+R+V
Sbjct: 136 IGRWTVEMLLIYSLERLDILPADDFGVREGYRRLKGLERQPTRKQMIEIGLSLRPHRTVA 195
Query: 257 SWYMWRL 263
+WY+WR+
Sbjct: 196 AWYLWRV 202
>gi|241764152|ref|ZP_04762187.1| HhH-GPD family protein [Acidovorax delafieldii 2AN]
gi|241366489|gb|EER60989.1| HhH-GPD family protein [Acidovorax delafieldii 2AN]
Length = 231
Score = 130 bits (327), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 70/194 (36%), Positives = 107/194 (55%), Gaps = 3/194 (1%)
Query: 72 ALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFN 131
A +HL KD ++ LI ++ F +LA+SI+ QQ++ KAA++++ RF AL
Sbjct: 35 ACKHLVKKDRVMKRLIPQFGDAALQTRGDAFTTLARSIVGQQISVKAAQTVWERFAALPR 94
Query: 132 GEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKML 191
G + P VL + +R G+S RK YL DLA + G L MDD + L
Sbjct: 95 G---MKPGNVLKLKIDDMRAAGLSARKVDYLVDLALHFEGGKLHVTDWAAMDDEAIIAEL 151
Query: 192 TSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKP 251
+++GIG W+ MF+IF L +P+VLP+ D+G+ G+ Y + EV E WKP
Sbjct: 152 VAIRGIGRWTAEMFLIFYLMRPNVLPLDDVGLINGISQNYFSGDPVSRSDAREVAEAWKP 211
Query: 252 YRSVGSWYMWRLME 265
+ SV +WY+WR ++
Sbjct: 212 WCSVATWYIWRSLD 225
>gi|148261618|ref|YP_001235745.1| DNA-3-methyladenine glycosylase II [Acidiphilium cryptum JF-5]
gi|146403299|gb|ABQ31826.1| DNA-3-methyladenine glycosylase II [Acidiphilium cryptum JF-5]
Length = 209
Score = 130 bits (327), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 67/186 (36%), Positives = 107/186 (57%), Gaps = 4/186 (2%)
Query: 80 DPLLATLIDAHRPPTF--ESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNIL 137
DP+L LI T E +R P+ +L ++ +QQL +AA+++ R AL
Sbjct: 13 DPVLGALIREVGRCTLAPERAREPYEALISAVAHQQLHARAAEAMLGRLRALTEAPVPA- 71
Query: 138 PDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGIL-SDESIVEMDDVTMFKMLTSVKG 196
P +L++S + LR G S KA+ LRD+A + DG + + + M D + + L +++G
Sbjct: 72 PGHLLSLSDEALRGCGFSAAKAAALRDIARRTLDGTVPTRRAAARMSDAALIERLCTLRG 131
Query: 197 IGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVG 256
IG W+V M +IF+L +PDV PV D GVR+G ++++GL+ P + E + PYRS
Sbjct: 132 IGRWTVEMLLIFTLGRPDVFPVDDFGVREGYRLIHGLEAQPKPRAFSAIGEAYAPYRSTA 191
Query: 257 SWYMWR 262
+WY+WR
Sbjct: 192 AWYLWR 197
>gi|385209050|ref|ZP_10035918.1| HhH-GPD superfamily base excision DNA repair protein [Burkholderia
sp. Ch1-1]
gi|385181388|gb|EIF30664.1| HhH-GPD superfamily base excision DNA repair protein [Burkholderia
sp. Ch1-1]
Length = 349
Score = 130 bits (326), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 116/210 (55%), Gaps = 7/210 (3%)
Query: 56 SPKIFKPLTFKGEVDIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLA 115
+P++ +P + D A L +D +L LI P S PF++LA+S++ QQ++
Sbjct: 141 TPEVTRPAYW----DKACADLVKRDRILKKLIPKFGPVHLLSRGDPFVTLARSVVGQQIS 196
Query: 116 YKAAKSIYTRFVALFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILS 175
+A++ + + A ++P + + ++L G+S RKA Y+ DLA+ + G L
Sbjct: 197 VASAQAAWAKVEAAC---PKLVPQQFIKLGLEKLTTCGLSKRKAEYVLDLAQHFVSGALH 253
Query: 176 DESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKE 235
M+D + LT ++GIG W+ MF+IF+L +PDVLP+ DLG+ + + V Y E
Sbjct: 254 VGKWTSMEDEAVIAELTQIRGIGRWTAEMFLIFNLSRPDVLPLDDLGLIRAISVNYFSGE 313
Query: 236 LPGALKMEEVCEKWKPYRSVGSWYMWRLME 265
+ EV W+P+R+V +WYMWR ++
Sbjct: 314 PVTRSEAREVAANWEPWRTVATWYMWRSLD 343
>gi|91788725|ref|YP_549677.1| HhH-GPD [Polaromonas sp. JS666]
gi|91697950|gb|ABE44779.1| HhH-GPD [Polaromonas sp. JS666]
Length = 231
Score = 130 bits (326), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 73/199 (36%), Positives = 107/199 (53%), Gaps = 3/199 (1%)
Query: 72 ALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFN 131
A RHL KD ++ LI + F +LA+SI+ QQ++ KAA+S++T+F AL
Sbjct: 31 ACRHLVKKDRVMKRLIPQFGDACLHARGDAFSTLARSIVGQQISVKAAQSVWTKFSAL-- 88
Query: 132 GEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKML 191
I P VL + +R G+S RK YL DL+ + G + + MDD + L
Sbjct: 89 -PKKITPANVLRLKVNDMRAAGLSARKVEYLVDLSIHFDTGTVHVKDWQAMDDEAIIAEL 147
Query: 192 TSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKP 251
+++GIG W+ MF+IF L +P+VLP+ DLG+ G+ Y E EV W P
Sbjct: 148 VAIRGIGRWTAEMFLIFYLMRPNVLPLDDLGLINGISQNYFSGESVSRSDAREVAAAWAP 207
Query: 252 YRSVGSWYMWRLMEAKGVL 270
Y SV +WY+WR ++ VL
Sbjct: 208 YCSVATWYIWRSLDPLPVL 226
>gi|407939985|ref|YP_006855626.1| HhH-GPD family protein [Acidovorax sp. KKS102]
gi|407897779|gb|AFU46988.1| HhH-GPD family protein [Acidovorax sp. KKS102]
Length = 224
Score = 130 bits (326), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 69/194 (35%), Positives = 109/194 (56%), Gaps = 2/194 (1%)
Query: 72 ALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFN 131
A +HL KD ++ LI ++ PF++LA+SI+ QQ++ +A++++ RFVAL
Sbjct: 27 ACKHLVKKDRVMKRLIPQFGDAALQTKGDPFITLARSIVGQQVSVASAQAVWERFVALL- 85
Query: 132 GEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKML 191
+ P +VL + +R G+S RK YL DLA + G L + MDD + L
Sbjct: 86 -PRGMKPASVLKLKIDDMRAAGLSARKVDYLVDLAMHFEGGKLHVKDWAAMDDEAIIAEL 144
Query: 192 TSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKP 251
+++GIG W+ MF+IF L +P+VLP+ D G+ G+ Y + EV E WKP
Sbjct: 145 VAIRGIGRWTAEMFLIFYLMRPNVLPLDDPGLISGISQNYFSGDPVSRSDAREVAEAWKP 204
Query: 252 YRSVGSWYMWRLME 265
+ SV +WY+WR ++
Sbjct: 205 WCSVATWYIWRSLD 218
>gi|326405108|ref|YP_004285190.1| DNA-3-methyladenine glycosylase II [Acidiphilium multivorum AIU301]
gi|325051970|dbj|BAJ82308.1| DNA-3-methyladenine glycosylase II [Acidiphilium multivorum AIU301]
Length = 209
Score = 130 bits (326), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 67/186 (36%), Positives = 107/186 (57%), Gaps = 4/186 (2%)
Query: 80 DPLLATLIDAHRPPTF--ESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNIL 137
DP+L LI T E +R P+ +L ++ +QQL +AA+++ R AL
Sbjct: 13 DPVLGALIREVGRCTLAPERAREPYEALISAVAHQQLHARAAEAMLGRLRALTEAPVPA- 71
Query: 138 PDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGIL-SDESIVEMDDVTMFKMLTSVKG 196
P +L++S + LR G S KA+ LRD+A + DG + + + M D + + L +++G
Sbjct: 72 PGHLLSLSDEALRGCGFSAAKAAALRDIARRTLDGTVPTRRAAARMSDAALIERLCTLRG 131
Query: 197 IGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVG 256
IG W+V M +IF+L +PDV PV D GVR+G ++++GL+ P + E + PYRS
Sbjct: 132 IGRWTVEMLLIFTLGRPDVFPVDDFGVREGYRLIHGLEAQPKPRAFAAIGEAYAPYRSTA 191
Query: 257 SWYMWR 262
+WY+WR
Sbjct: 192 AWYLWR 197
>gi|429190504|ref|YP_007176182.1| HhH-GPD superfamily base excision DNA repair protein
[Natronobacterium gregoryi SP2]
gi|448324220|ref|ZP_21513653.1| HhH-GPD family protein [Natronobacterium gregoryi SP2]
gi|429134722|gb|AFZ71733.1| HhH-GPD superfamily base excision DNA repair protein
[Natronobacterium gregoryi SP2]
gi|445619339|gb|ELY72880.1| HhH-GPD family protein [Natronobacterium gregoryi SP2]
Length = 202
Score = 130 bits (326), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 62/183 (33%), Positives = 106/183 (57%), Gaps = 3/183 (1%)
Query: 79 KDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNILP 138
KDP++A L+D H P E + L SI+ QQL+ +A ++ R + +G ++ P
Sbjct: 11 KDPVMAELVDRH-DPYVEPDWGEYERLCISIINQQLSTASATAVRERVFDVLDG--DVTP 67
Query: 139 DAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIG 198
+ VL+ LR+ G+S RK Y+++ A + + S + + + + LT + GIG
Sbjct: 68 ERVLSADDAALRDAGLSRRKVEYVQNAARAFQEHDYSRAGLADSSNEEVVDRLTEITGIG 127
Query: 199 AWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSW 258
W+ M+++F L +PDVLP+GDL +R+G++ LY E +M E+ ++W+PYRSV +
Sbjct: 128 EWTARMYLLFVLERPDVLPLGDLAIRRGIEELYADGEELTRAEMREIAKQWRPYRSVATR 187
Query: 259 YMW 261
Y+W
Sbjct: 188 YVW 190
>gi|448734428|ref|ZP_21716654.1| HhH-GPD family protein [Halococcus salifodinae DSM 8989]
gi|445800476|gb|EMA50831.1| HhH-GPD family protein [Halococcus salifodinae DSM 8989]
Length = 187
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 62/183 (33%), Positives = 106/183 (57%), Gaps = 6/183 (3%)
Query: 79 KDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNILP 138
+DP++A LID H P E + + F L +I+ Q ++ +A ++ R L + + P
Sbjct: 6 EDPVMAELIDEHGPLELEPADNEFRRLVVTIINQSISTASAAAVRERVFDLL---EEVTP 62
Query: 139 DAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIG 198
+ VL + LR+ G+ K Y+R+ A + + L+ + + D + LT ++GIG
Sbjct: 63 ETVLEADEEALRDAGLGEAKTEYVRNAARAFQERDLTRAGLADESDEAVIDHLTEIRGIG 122
Query: 199 AWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSW 258
AW+ M++IF L + DV P+GDL VR+G++ LYG E+ +M E+ E+W+PYRS+ +
Sbjct: 123 AWTGRMYLIFVLGREDVFPIGDLAVRRGIESLYG--EMTRE-EMHELAERWRPYRSIATR 179
Query: 259 YMW 261
Y+W
Sbjct: 180 YLW 182
>gi|409044793|gb|EKM54274.1| hypothetical protein PHACADRAFT_210092 [Phanerochaete carnosa
HHB-10118-sp]
Length = 461
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 75/180 (41%), Positives = 106/180 (58%), Gaps = 17/180 (9%)
Query: 63 LTFKGEVDIALRHLRDKDPLLATLIDAHRPPTFESSR--SPFLSLAKSILYQQLAYKAAK 120
LTF EV A HL DP + + FE PF +L SIL QQ+++ AA+
Sbjct: 113 LTFSFEV--AKSHLIGVDPRFEDIFSRLKCRPFEHLERVDPFRTLTHSILGQQISWLAAR 170
Query: 121 SIYTRFVALFN-----------GEDNILPDA--VLAVSPQQLREIGVSYRKASYLRDLAE 167
SI +F+ LF+ G D P A V+ + LR G+S RKA Y+ DLA
Sbjct: 171 SITHKFIRLFDPSLPEKPTDHHGPDTFFPTAHQVIQMDIPTLRTAGLSQRKAEYILDLAA 230
Query: 168 KYTDGILSDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGL 227
++ DG LS E ++E +D ++++LT+V+GIG W+V MF IFSL +PD+LPVGDLGV++G+
Sbjct: 231 RFADGRLSTEKLLEAEDEELYELLTAVRGIGRWTVDMFAIFSLRRPDILPVGDLGVQRGI 290
>gi|241664019|ref|YP_002982379.1| DNA-3-methyladenine glycosylase II [Ralstonia pickettii 12D]
gi|240866046|gb|ACS63707.1| DNA-3-methyladenine glycosylase II [Ralstonia pickettii 12D]
Length = 216
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 63/171 (36%), Positives = 98/171 (57%), Gaps = 1/171 (0%)
Query: 94 TFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNILPDAVLAVSPQQLREIG 153
T + +R P+ +L ++I YQQL KA +I RF+AL+ P VLA LR G
Sbjct: 39 TAKPAREPYEALIRAIAYQQLHAKAGDAILGRFLALYPAAAFPAPQQVLATDEAALRACG 98
Query: 154 VSYRKASYLRDLAEKYTDGIL-SDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHK 212
S K + +R +A+ DGI+ + E + M D + + L +++G+G W+V M +I++L +
Sbjct: 99 FSATKLATIRGIAQAALDGIVPTREQALAMPDEALIERLVTLRGVGRWTVEMLLIYTLER 158
Query: 213 PDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSWYMWRL 263
D+LP D GVR G + L L P +ME + W PYR+V +WY+WR+
Sbjct: 159 SDILPADDFGVRDGYRRLKQLDATPTRKQMETISLAWSPYRTVAAWYLWRV 209
>gi|453080250|gb|EMF08301.1| DNA glycosylase [Mycosphaerella populorum SO2202]
Length = 388
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 86/239 (35%), Positives = 122/239 (51%), Gaps = 27/239 (11%)
Query: 64 TFKGEVDIALRHLRDKDPLLAT----LIDAH-----RPPTFESSRSPFLSLAKSILYQQL 114
T K +D A HL D L +ID H P + PF SLA I+ QQ+
Sbjct: 150 TSKTLLDEACAHLLQIDSTLTGKLQPVIDQHYCRVFSPEGLAENIDPFRSLASGIMAQQV 209
Query: 115 AYKAAKSIYTRFVALFNGEDNIL----PDAVLAVSPQQLREIGVSYRKASYLRDLAEKYT 170
+ AA SI +F+ALF E P+ V A LR G+S RKA Y++ LA+K+
Sbjct: 210 SGAAASSIKNKFIALFPPEACPTGFPPPNLVAATDLAILRTAGLSQRKAEYIQGLAQKFD 269
Query: 171 DGILSDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVL 230
G ++ + ++ D + + L +V+G+GAWSV MFM F L + DV GDLGV++G+
Sbjct: 270 TGEITTKQLMTGSDEDVMRDLVAVRGLGAWSVEMFMCFGLKRLDVFSTGDLGVQRGMAAY 329
Query: 231 YG-----LKELPGA-------LKMEEVCEKWKPYRSVGSWYMWRL--MEAKGVLPNVAK 275
G LK G +M ++ EK++PYRS+ WYMWR+ +E V N K
Sbjct: 330 MGRDVSKLKAKGGGKWKYMSEKEMVDLAEKFRPYRSLFMWYMWRIENVEVAAVQDNAEK 388
>gi|340787524|ref|YP_004752989.1| DNA-3-methyladenine glycosylase II [Collimonas fungivorans Ter331]
gi|340552791|gb|AEK62166.1| DNA-3-methyladenine glycosylase II [Collimonas fungivorans Ter331]
Length = 221
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 64/165 (38%), Positives = 102/165 (61%), Gaps = 3/165 (1%)
Query: 102 FLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNILPDAVLAVSPQQLREIGVSYRKASY 161
F +LA+S++ QQ++ KAA+S + +F+ + P VL P+QL G+S RKA Y
Sbjct: 50 FTTLARSVVGQQVSVKAAESAWQKFLLVCP---KTTPAQVLKAGPEQLAACGLSKRKADY 106
Query: 162 LRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDL 221
+ DLA+ + ++ E +EMDD + LT ++GIG W+ MF+IF+L +P++LP+ DL
Sbjct: 107 ILDLADHFKAKRVNAEQWMEMDDEDVIADLTQIRGIGRWTAEMFLIFNLLRPNILPLDDL 166
Query: 222 GVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSWYMWRLMEA 266
G+ KG+ V Y E EV W+P+R+V +WY+WR ++A
Sbjct: 167 GLLKGISVNYFSGEPVSRSDAREVSANWEPWRTVATWYLWRSLDA 211
>gi|406959945|gb|EKD87163.1| putative DNA-3-methyladenine glycosylase [uncultured bacterium]
Length = 198
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 67/194 (34%), Positives = 111/194 (57%), Gaps = 1/194 (0%)
Query: 72 ALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFN 131
AL H + DP L + + F+ L SI+ QQL+ KAA +I++RF LF
Sbjct: 5 ALGHFKKIDPTLYEIALTVKLEALSKPSDYFIDLVDSIISQQLSGKAAATIFSRFKKLFP 64
Query: 132 GEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKML 191
E I D +L + Q++RE G+S+ K Y++ +AEK T+ L+ + ++ D + L
Sbjct: 65 QE-KITADKLLKIPDQKIREAGISFSKIHYIKGIAEKITNKELNLNKLEKLSDEEVIMEL 123
Query: 192 TSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKP 251
+KGIG W+ MF+IF+L + D+ GDLG++ ++ LY L++ ++ E+ KWKP
Sbjct: 124 VKIKGIGIWTAEMFLIFTLLREDIFSAGDLGLQNAVKKLYKLEKDLSKNELLEISSKWKP 183
Query: 252 YRSVGSWYMWRLME 265
YR++ S +WR ++
Sbjct: 184 YRTLASRILWRSLD 197
>gi|413958322|ref|ZP_11397561.1| HhH-GPD family protein [Burkholderia sp. SJ98]
gi|413940902|gb|EKS72862.1| HhH-GPD family protein [Burkholderia sp. SJ98]
Length = 339
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 68/195 (34%), Positives = 108/195 (55%), Gaps = 3/195 (1%)
Query: 70 DIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVAL 129
D A L +D +L LI + PF +LA+S+ QQ++ KAA++I+ R
Sbjct: 141 DRACADLMRRDRILKKLIPKFGEIHLVNLGDPFSTLARSVAGQQISVKAAQAIWERVKGA 200
Query: 130 FNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFK 189
+ P + + ++L+ G+S RKA Y+ DLA+ + G L ++ MDD +
Sbjct: 201 C---PEVHPAHFIKLGHEKLQACGLSKRKAEYILDLAQHFESGALHVDAWTSMDDEAVIA 257
Query: 190 MLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKW 249
LT ++GIG W+ MF+IF+L +PDVLP+ DLG+ + + V Y E + EV W
Sbjct: 258 ELTQIRGIGRWTAEMFLIFNLSRPDVLPLDDLGLIQAISVNYFSGEPVTRSEAREVAANW 317
Query: 250 KPYRSVGSWYMWRLM 264
+P+R+V +WYMWR +
Sbjct: 318 EPWRTVATWYMWRSL 332
>gi|337279179|ref|YP_004618651.1| DNA glycosylase [Ramlibacter tataouinensis TTB310]
gi|334730256|gb|AEG92632.1| Candidate DNA glycosylase [Ramlibacter tataouinensis TTB310]
Length = 216
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 70/194 (36%), Positives = 106/194 (54%), Gaps = 3/194 (1%)
Query: 72 ALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFN 131
A RHL KD ++ LI +S F +LA+SI+ QQ++ KAA+S++ RF L
Sbjct: 20 ACRHLARKDRVMKRLIPQFGDACLQSRGDAFTTLARSIVGQQISVKAAQSVWDRFAKL-- 77
Query: 132 GEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKML 191
+ P AVL + +R G+S RK YL DLA + G + ++ M+D + L
Sbjct: 78 -PRRMTPAAVLKLKVDDMRAAGLSARKIEYLVDLALHFDSGAIHVDAWDRMEDEAIITEL 136
Query: 192 TSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKP 251
++GIG W+ MF+IF L +PDVLP+ D+G+ G+ Y + + EV W P
Sbjct: 137 VGIRGIGRWTAEMFLIFHLMRPDVLPLDDIGLINGISKNYFSGDPVSRSEAREVAAAWTP 196
Query: 252 YRSVGSWYMWRLME 265
Y SV +WY+WR ++
Sbjct: 197 YCSVATWYIWRSLD 210
>gi|448395137|ref|ZP_21568557.1| HhH-GPD family protein [Haloterrigena salina JCM 13891]
gi|445661737|gb|ELZ14518.1| HhH-GPD family protein [Haloterrigena salina JCM 13891]
Length = 196
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 62/188 (32%), Positives = 105/188 (55%), Gaps = 3/188 (1%)
Query: 80 DPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNILPD 139
DP++A LI+ H P E + F L SI+ QQL+ +A ++ R L D + P+
Sbjct: 12 DPVMAELIERH-DPYVEPDWNEFERLCISIINQQLSTASATAVRERVFELLR--DEVTPE 68
Query: 140 AVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIGA 199
VL + LR G+S K Y+R+ A + + + + + + + +LT +KG+G
Sbjct: 69 TVLEAEDEALRAAGLSESKIEYMRNAARAFRENDYTRAGLADYSNDEVIDLLTEIKGVGE 128
Query: 200 WSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSWY 259
W+ M+++F L + DVLP+GDL +R+ ++ LYG E +M E+ E+W+PYRS + Y
Sbjct: 129 WTARMYLLFVLQREDVLPLGDLAIRRAIEELYGDGEELSRAEMREIAERWRPYRSAATRY 188
Query: 260 MWRLMEAK 267
+W E++
Sbjct: 189 LWAEYESE 196
>gi|391869074|gb|EIT78279.1| 3-methyladenine DNA glycosidase [Aspergillus oryzae 3.042]
Length = 379
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 83/223 (37%), Positives = 115/223 (51%), Gaps = 28/223 (12%)
Query: 69 VDIALRHLRDKDPLLATLIDAHRPPTFE-----SSRSPFLSLAKSILYQQLAYKAAKSIY 123
++ A+ HL D L +I H P F PF SL SI+ QQ++ AAKSI
Sbjct: 147 LEKAVAHLIATDSRLEPVIKQHPCPLFSPEGLAEEVDPFRSLVVSIIGQQVSGAAAKSIK 206
Query: 124 TRFVALFNGED--NILPDAVLAVSPQQ--------LREIGVSYRKASYLRDLAEKYTDGI 173
+FVALFN D + P+A P++ LR G+S RKA Y++ L++K+ G
Sbjct: 207 NKFVALFNSGDSGDNAPEASRFPKPEEIIKCDIATLRTAGLSQRKAEYIQGLSQKFASGE 266
Query: 174 LSDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGV-RKGLQVLYG 232
LS ++ D + + LT+V+G+G WSV MF F+L + DV GDLGV R+G G
Sbjct: 267 LSARMLLNASDEELLEKLTAVRGLGKWSVEMFACFALKRIDVFSTGDLGVHRRGCAAFMG 326
Query: 233 -----LKELPGA-------LKMEEVCEKWKPYRSVGSWYMWRL 263
LK G M E+ K+ PYRS+ WYMWR+
Sbjct: 327 KDVSKLKAKGGGKFKYMAEKDMLELAAKFAPYRSLFMWYMWRV 369
>gi|309781389|ref|ZP_07676125.1| DNA-3-methyladenine glycosylase [Ralstonia sp. 5_7_47FAA]
gi|404396949|ref|ZP_10988743.1| hypothetical protein HMPREF0989_00964 [Ralstonia sp. 5_2_56FAA]
gi|308919802|gb|EFP65463.1| DNA-3-methyladenine glycosylase [Ralstonia sp. 5_7_47FAA]
gi|348617077|gb|EGY66558.1| hypothetical protein HMPREF0989_00964 [Ralstonia sp. 5_2_56FAA]
Length = 216
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 62/167 (37%), Positives = 96/167 (57%), Gaps = 1/167 (0%)
Query: 98 SRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNILPDAVLAVSPQQLREIGVSYR 157
+R P+ +L ++I YQQL KA +I RF+AL+ P VLA LR G S
Sbjct: 43 AREPYEALIRAIAYQQLHAKAGDAILGRFIALYPAAAFPAPQQVLATDEAALRACGFSAT 102
Query: 158 KASYLRDLAEKYTDGIL-SDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVL 216
K + +R +A+ DGI+ + E + M D + + L +++G+G W+V M +I++L + D+L
Sbjct: 103 KLATIRGIAQAALDGIVPTREQALAMPDEALIERLVTLRGVGRWTVEMLLIYTLERSDIL 162
Query: 217 PVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSWYMWRL 263
P D GVR G + L L P +ME + W PYR+V +WY+WR+
Sbjct: 163 PADDFGVRDGYRRLKRLDATPTRKQMETISLAWSPYRTVAAWYLWRV 209
>gi|398811677|ref|ZP_10570467.1| HhH-GPD superfamily base excision DNA repair protein [Variovorax
sp. CF313]
gi|398079925|gb|EJL70759.1| HhH-GPD superfamily base excision DNA repair protein [Variovorax
sp. CF313]
Length = 216
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 69/194 (35%), Positives = 109/194 (56%), Gaps = 3/194 (1%)
Query: 72 ALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFN 131
A +HL KD ++ LI ES F +LA+S++ QQ++ KAA+S++ +F AL
Sbjct: 20 ACKHLSRKDRVMKRLIPKFGDACLESRGDAFTTLARSVVGQQISVKAAQSVWDKFAAL-- 77
Query: 132 GEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKML 191
+ P VL + +R G+S RK YL DLA + G++ ++ +M D + + L
Sbjct: 78 -PRKLTPANVLKLKVDDMRGAGLSARKIEYLVDLALHFDSGMVHVDAWKDMSDELIIEEL 136
Query: 192 TSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKP 251
+++GIG W+ MF+IF L +P+VLPV DLG+ G+ V Y + +V W P
Sbjct: 137 VAIRGIGRWTAEMFLIFHLMRPNVLPVDDLGLLNGISVNYFSGDPVSRSDARDVAVAWAP 196
Query: 252 YRSVGSWYMWRLME 265
Y SV +WY+WR ++
Sbjct: 197 YCSVATWYIWRSLD 210
>gi|354593794|ref|ZP_09011837.1| putative DNA-3-methyladenine glycosylase [Commensalibacter
intestini A911]
gi|353672905|gb|EHD14601.1| putative DNA-3-methyladenine glycosylase [Commensalibacter
intestini A911]
Length = 219
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 71/203 (34%), Positives = 114/203 (56%), Gaps = 8/203 (3%)
Query: 65 FKGEVDIALRHLRDKDPLLATLIDAHRPPTFE--SSRSPFLSLAKSILYQQLAYKAAKSI 122
++ ++ A L + DP LA +I + + + P+ +L ++I QQL KA +I
Sbjct: 4 WQQKIQEATDFLSNIDPDLALVIQKEKNCRLQVKQKQEPYFALLEAIAGQQLHAKAVTAI 63
Query: 123 YTRFVALFNGEDNILP--DAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDG-ILSDESI 179
R AL NG LP D +L + + LR G S+RK + ++ LA +G + S E
Sbjct: 64 LNRLKALNNG---ALPSTDKLLTYTDEALRSCGFSFRKIATMQKLAMATQEGNVPSYEQA 120
Query: 180 VEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGA 239
M D + ++LT + GIG W+V MF+IF+L + D++PV D G+R+G ++ L E P
Sbjct: 121 QNMSDEALIELLTQLPGIGVWTVEMFLIFTLGRLDIMPVHDFGIREGWKICKKLSEQPKP 180
Query: 240 LKMEEVCEKWKPYRSVGSWYMWR 262
+++E W PYRSVG+W++WR
Sbjct: 181 KELKEKTLSWSPYRSVGAWFLWR 203
>gi|254252009|ref|ZP_04945327.1| 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase
[Burkholderia dolosa AUO158]
gi|124894618|gb|EAY68498.1| 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase
[Burkholderia dolosa AUO158]
Length = 288
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 71/232 (30%), Positives = 122/232 (52%), Gaps = 13/232 (5%)
Query: 41 AEIPVATAI------STNSDNSPKIFKPLTFKGEVDIALRHLRDKDPLLATLIDAHRPPT 94
A +P A A+ +D + + +P + D A L +D +L LI P
Sbjct: 59 AAMPAADAVRKARESDATADGADAVVRPAYW----DKACADLMKRDRILKKLIPKFGPAH 114
Query: 95 FESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNILPDAVLAVSPQQLREIGV 154
PF++LA+S++ QQ++ +A+S++ R + + + P V+ + +L G+
Sbjct: 115 LVKRGDPFVTLARSVVGQQISAPSAQSLWAR---IEDACPKLAPQPVIRLGADKLIACGL 171
Query: 155 SYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPD 214
S RK Y+ DLA+ + G L + + MDD + LT ++GI W+ MF+IF+L +PD
Sbjct: 172 SKRKTEYILDLAQHFVSGALHVDKWMSMDDEDVIAELTQIRGISRWTAEMFLIFNLSRPD 231
Query: 215 VLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSWYMWRLMEA 266
V+P+ D G+ + + V Y E + EV W+P+R+V +WYMWR ++A
Sbjct: 232 VMPLDDPGLIRAISVNYFSGEPVTRSEAREVAANWEPWRTVATWYMWRSLDA 283
>gi|238027919|ref|YP_002912150.1| DNA-3-methyladenine glycosylase [Burkholderia glumae BGR1]
gi|237877113|gb|ACR29446.1| DNA-3-methyladenine glycosylase [Burkholderia glumae BGR1]
Length = 303
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 109/196 (55%), Gaps = 3/196 (1%)
Query: 70 DIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVAL 129
D A L +D +L LI P PF++LA+S++ QQ++ A++++ A+
Sbjct: 105 DKACADLVKRDRILKKLIPKFGPAHLVKRGDPFVTLARSVVGQQISVATAQAVWA---AI 161
Query: 130 FNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFK 189
+ P V+ + ++L G+S RK+ Y+ DLA+ + G L + M+D +
Sbjct: 162 EAACPKLTPQQVIRLGQEKLAACGLSKRKSDYILDLAQHFVSGALHVDKWTSMEDEAVIA 221
Query: 190 MLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKW 249
LT ++GIG W+ MF+IF+L +PDVLP+ DLG+ + + + Y E + EV W
Sbjct: 222 ELTQIRGIGRWTAEMFLIFNLSRPDVLPLDDLGLIRAISINYFSGEPVTRSEAREVAANW 281
Query: 250 KPYRSVGSWYMWRLME 265
+P+R+V +WYMWR ++
Sbjct: 282 EPWRTVATWYMWRSLD 297
>gi|83719392|ref|YP_442472.1| DNA-3-methyladenine glycosylase [Burkholderia thailandensis E264]
gi|257138680|ref|ZP_05586942.1| DNA-3-methyladenine glycosylase [Burkholderia thailandensis E264]
gi|83653217|gb|ABC37280.1| DNA-3-methyladenine glycosylase [Burkholderia thailandensis E264]
Length = 312
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 66/196 (33%), Positives = 109/196 (55%), Gaps = 3/196 (1%)
Query: 70 DIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVAL 129
D A L +D +L LI P F++LA+S++ QQ++ AA+S++ V +
Sbjct: 114 DKACADLVKRDRILKKLIPKFGPAHLVKRGDSFVTLARSVVGQQISVAAAQSVW---VKI 170
Query: 130 FNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFK 189
+ P ++ + ++L G+S RK+ Y+ DLA+ + G L + MDD +
Sbjct: 171 ETACPKLAPPQIIKLGQEKLIACGLSKRKSEYILDLAQHFVSGALHVDKWASMDDEDVIA 230
Query: 190 MLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKW 249
LT ++GIG W+ MF+IF+L +PDVLP+ DLG+ + + V Y E + EV W
Sbjct: 231 ELTQIRGIGRWTAEMFLIFNLSRPDVLPLDDLGLIRAISVNYFSGEPVTRSEAREVAANW 290
Query: 250 KPYRSVGSWYMWRLME 265
+P+R+V +WYMWR ++
Sbjct: 291 EPWRTVATWYMWRSLD 306
>gi|406965958|gb|EKD91542.1| hypothetical protein ACD_30C00002G0039 [uncultured bacterium]
Length = 198
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 114/188 (60%), Gaps = 2/188 (1%)
Query: 75 HLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGED 134
+ DP++ +LI+ + +S++ F++L +SI+ QQ++ KA ++++ RF+ LF +
Sbjct: 8 YFEKSDPVIYSLIEEYGLIEVVASKTYFINLCRSIINQQISNKAGRAVFERFINLFPNKI 67
Query: 135 NILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSV 194
P+ +L + ++LR +G+S K SYL+DL+++ L E I M+D + + L V
Sbjct: 68 PT-PEKLLKIKDEKLRSVGMSKIKVSYLKDLSKRIIKKELLLEKIEVMEDTEVIEQLIRV 126
Query: 195 KGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRS 254
KGIG W+ MF++FSL + D+ GD+G+R ++ LY L E P ++E++ E W PY++
Sbjct: 127 KGIGVWTAEMFLMFSLGREDIFSHGDIGLRNAIKKLYFL-ENPSRKEIEKIVENWSPYKT 185
Query: 255 VGSWYMWR 262
+WR
Sbjct: 186 YVCKLLWR 193
>gi|377821177|ref|YP_004977548.1| HhH-GPD family protein [Burkholderia sp. YI23]
gi|357936012|gb|AET89571.1| HhH-GPD family protein [Burkholderia sp. YI23]
Length = 344
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 68/193 (35%), Positives = 107/193 (55%), Gaps = 3/193 (1%)
Query: 70 DIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVAL 129
D A L +D +L LI + PF +LA+S+ QQ++ KAA++I+ R +
Sbjct: 146 DRACADLMKRDRILKKLIPKFGEIHLVNLGDPFSTLARSVAGQQISTKAAQAIWER---V 202
Query: 130 FNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFK 189
+ P + + +L+ G+S RKA Y+ DLA+ + G L ++ MDD +
Sbjct: 203 KTACPEVHPAHFIKLGHDKLQACGLSRRKAEYILDLAQHFESGALHVDAWTSMDDEAVIA 262
Query: 190 MLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKW 249
LT ++GIG W+ MF+IF+L +PDVLP+ DLG+ + + V Y E + EV W
Sbjct: 263 ELTQIRGIGRWTAEMFLIFNLSRPDVLPLDDLGLIQAISVNYFSGEPVTRSEAREVAANW 322
Query: 250 KPYRSVGSWYMWR 262
+P+R+V +WYMWR
Sbjct: 323 EPWRTVATWYMWR 335
>gi|358390287|gb|EHK39693.1| hypothetical protein TRIATDRAFT_133222 [Trichoderma atroviride IMI
206040]
Length = 522
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 76/224 (33%), Positives = 117/224 (52%), Gaps = 30/224 (13%)
Query: 72 ALRHLRDKDPLLATLIDAHR-----PPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRF 126
A HL D + LI+ H P PF SL SI+ QQ++ AA+SI +F
Sbjct: 141 ACDHLIKVDERMRLLIEKHHCHVFSPEGLAEKIDPFESLVSSIISQQVSGAAARSIKAKF 200
Query: 127 VALFNGEDNI--------------LPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDG 172
+ALF +D P V A S ++LR G+S RKA Y++ LAEK+ G
Sbjct: 201 IALFFPQDEASQPTNYESAVDRFPAPSDVAACSIEKLRTAGLSQRKAEYVQGLAEKFASG 260
Query: 173 ILSDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYG 232
++ + + + D + + L +V+G+G W+V MF F+L + +V +GDLG+++G+ G
Sbjct: 261 EITAQMLHDAPDEELMEKLVAVRGLGKWTVEMFAFFALKRMNVFSLGDLGIQRGMAAFVG 320
Query: 233 -----LKELPGALK------MEEVCEKWKPYRSVGSWYMWRLME 265
LK G K M E+ +K++PYRS+ WYMW++ E
Sbjct: 321 RDVAKLKNKGGKWKYMSEQDMVELSDKFRPYRSLFMWYMWKVEE 364
>gi|187929909|ref|YP_001900396.1| DNA-3-methyladenine glycosylase II [Ralstonia pickettii 12J]
gi|187726799|gb|ACD27964.1| DNA-3-methyladenine glycosylase II [Ralstonia pickettii 12J]
Length = 216
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 63/171 (36%), Positives = 98/171 (57%), Gaps = 1/171 (0%)
Query: 94 TFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNILPDAVLAVSPQQLREIG 153
T + +R P+ +L ++I YQQL KA +I RF+AL+ P VLA LR G
Sbjct: 39 TAKPAREPYEALIRAIAYQQLHAKAGDAILGRFLALYPAAAFPAPQQVLATEEATLRACG 98
Query: 154 VSYRKASYLRDLAEKYTDGIL-SDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHK 212
S K + +R +A+ DGI+ + E + M D + + L +++G+G W+V M +I++L +
Sbjct: 99 FSAIKLATIRGIAQAALDGIVPTREQALAMPDEALIERLVTLRGVGRWTVEMLLIYTLER 158
Query: 213 PDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSWYMWRL 263
D+LP D GVR G + L L P +ME + W PYR+V +WY+WR+
Sbjct: 159 SDILPADDFGVRDGYRRLKRLDATPTRKQMETISLAWSPYRTVAAWYLWRV 209
>gi|350545605|ref|ZP_08915077.1| HhH-GPD base excision DNA repair familyprotein, Probable
3-methyladenine DNAglycosylase/8-oxoguanine DNA
glycosylase [Candidatus Burkholderia kirkii UZHbot1]
gi|350526662|emb|CCD39994.1| HhH-GPD base excision DNA repair familyprotein, Probable
3-methyladenine DNAglycosylase/8-oxoguanine DNA
glycosylase [Candidatus Burkholderia kirkii UZHbot1]
Length = 350
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 68/195 (34%), Positives = 108/195 (55%), Gaps = 3/195 (1%)
Query: 70 DIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVAL 129
D A L +D +L LI + PF +LA+S+ QQ++ KAA++I+ R
Sbjct: 152 DRACADLMKRDRILKKLIPKFSEIHLVNLGDPFSTLARSVAGQQISTKAAQAIWERVKGA 211
Query: 130 FNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFK 189
I P + + ++L+ G+S RKA Y+ DLA+ + +G L ++ DD +
Sbjct: 212 C---PEIHPAQFIRLGHEKLQACGLSRRKAEYILDLAQHFENGALHVDAWTSRDDEAVIA 268
Query: 190 MLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKW 249
LT ++GIG W+ MF+IF+L +PDVLP+ DLG+ + + V Y E + EV W
Sbjct: 269 ELTQIRGIGRWTAEMFLIFNLSRPDVLPLDDLGLIQAISVNYFSGEPVTRSEAREVAANW 328
Query: 250 KPYRSVGSWYMWRLM 264
+P+R+V +WYMWR +
Sbjct: 329 EPWRTVATWYMWRSL 343
>gi|345563223|gb|EGX46226.1| hypothetical protein AOL_s00110g50 [Arthrobotrys oligospora ATCC
24927]
Length = 364
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 85/233 (36%), Positives = 129/233 (55%), Gaps = 22/233 (9%)
Query: 68 EVDIALRHLRDKDPLLATLIDAHRPPTFESSR-----SPFLSLAKSILYQQLAYKAAKSI 122
EV + HL +P L+T+I H F +S +PF SL I+ QQ++ AA SI
Sbjct: 131 EVHPGITHLLTTNPSLSTIITRHPCTLFSASGLLEPVNPFHSLCSGIISQQVSSAAAASI 190
Query: 123 YTRFVALFNGEDNILPDA-VLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVE 181
+RF+ALFN + P + +L LR G+S RKA Y+ LAE + G L++E ++E
Sbjct: 191 KSRFIALFNATNTFPPPSEILTKDIDTLRTAGLSQRKAEYITGLAELFVSGDLTNELLLE 250
Query: 182 MDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYG--LKEL--- 236
D + + L V+G+G WS+ MF++F+L + DV GDLG+++G+ +L G + +L
Sbjct: 251 SPDDVVTEKLIKVRGLGLWSIQMFLLFALKRTDVFATGDLGIQRGMAILAGRDVNKLKFS 310
Query: 237 -PGAL---------KMEEVCEKWKPYRSVGSWYMWRLMEAK-GVLPNVAKAAV 278
PG +M ++ E + PYRS+ SWY+WRL + VL V K V
Sbjct: 311 KPGKAGKWKYMAEDEMIKLAEVYSPYRSLLSWYLWRLADTDVEVLKGVDKTKV 363
>gi|170733432|ref|YP_001765379.1| DNA-3-methyladenine glycosylase II [Burkholderia cenocepacia MC0-3]
gi|169816674|gb|ACA91257.1| DNA-3-methyladenine glycosylase II [Burkholderia cenocepacia MC0-3]
Length = 275
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 116/217 (53%), Gaps = 7/217 (3%)
Query: 50 STNSDNSPKIFKPLTFKGEVDIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSI 109
++ +D + +P + D A L +D +L LI P PF++LA+S+
Sbjct: 61 ASEADGEEGVVRPAYW----DKACADLVKRDRILKKLIPKFGPAHLVKRGDPFVTLARSV 116
Query: 110 LYQQLAYKAAKSIYTRFVALFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKY 169
+ QQ++ +A+S++ R + + + P V+ + +L G+S RK Y+ DLA+ +
Sbjct: 117 VGQQISVPSAQSLWAR---IEDACPKLAPQPVIRLGADKLIACGLSKRKTEYILDLAQHF 173
Query: 170 TDGILSDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQV 229
G L + MDD + LT ++GI W+ MF+IF+L +PDVLP+ D G+ + + V
Sbjct: 174 VSGALHVDKWTSMDDEDVIAELTQIRGISRWTAEMFLIFNLSRPDVLPLDDPGLIRAISV 233
Query: 230 LYGLKELPGALKMEEVCEKWKPYRSVGSWYMWRLMEA 266
Y E + EV W+P+R+V +WYMWR ++A
Sbjct: 234 NYFSGEPVTRSEAREVAANWEPWRTVATWYMWRSLDA 270
>gi|167581387|ref|ZP_02374261.1| DNA-3-methyladenine glycosylase [Burkholderia thailandensis TXDOH]
Length = 312
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 66/196 (33%), Positives = 109/196 (55%), Gaps = 3/196 (1%)
Query: 70 DIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVAL 129
D A L +D +L LI P F++LA+S++ QQ++ AA+S++ V +
Sbjct: 114 DKACADLVKRDRILKKLIPKFGPAHLVKRGDSFVTLARSVVGQQISVAAAQSVW---VKI 170
Query: 130 FNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFK 189
+ P ++ + ++L G+S RK+ Y+ DLA+ + G L + MDD +
Sbjct: 171 ETACPKLAPPQIIRLGQEKLIACGLSKRKSEYILDLAQHFVSGALHVDKWASMDDEDVIA 230
Query: 190 MLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKW 249
LT ++GIG W+ MF+IF+L +PDVLP+ DLG+ + + V Y E + EV W
Sbjct: 231 ELTQIRGIGRWTAEMFLIFNLSRPDVLPLDDLGLIRAISVNYFSGEPVTRSEAREVAANW 290
Query: 250 KPYRSVGSWYMWRLME 265
+P+R+V +WYMWR ++
Sbjct: 291 EPWRTVATWYMWRSLD 306
>gi|167619501|ref|ZP_02388132.1| DNA-3-methyladenine glycosylase [Burkholderia thailandensis Bt4]
Length = 273
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 66/196 (33%), Positives = 109/196 (55%), Gaps = 3/196 (1%)
Query: 70 DIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVAL 129
D A L +D +L LI P F++LA+S++ QQ++ AA+S++ V +
Sbjct: 75 DKACADLVKRDRILKKLIPKFGPAHLVKRGDSFVTLARSVVGQQISVAAAQSVW---VKI 131
Query: 130 FNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFK 189
+ P ++ + ++L G+S RK+ Y+ DLA+ + G L + MDD +
Sbjct: 132 ETACPKLAPPQIIKLGQEKLIACGLSKRKSEYILDLAQHFVSGALHVDKWASMDDEDVIA 191
Query: 190 MLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKW 249
LT ++GIG W+ MF+IF+L +PDVLP+ DLG+ + + V Y E + EV W
Sbjct: 192 ELTQIRGIGRWTAEMFLIFNLSRPDVLPLDDLGLIRAISVNYFSGEPVTRSEAREVAANW 251
Query: 250 KPYRSVGSWYMWRLME 265
+P+R+V +WYMWR ++
Sbjct: 252 EPWRTVATWYMWRSLD 267
>gi|237812905|ref|YP_002897356.1| DNA-3-methyladenine glycosylase [Burkholderia pseudomallei MSHR346]
gi|237505833|gb|ACQ98151.1| DNA-3-methyladenine glycosylase [Burkholderia pseudomallei MSHR346]
Length = 312
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 66/196 (33%), Positives = 109/196 (55%), Gaps = 3/196 (1%)
Query: 70 DIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVAL 129
D A L +D +L LI P F++LA+S++ QQ++ AA+S++ V +
Sbjct: 114 DKACADLVKRDRILKKLIPKFGPAHLVKRGDSFVTLARSVVGQQISVAAAQSVW---VKI 170
Query: 130 FNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFK 189
+ P ++ + ++L G+S RK+ Y+ DLA+ + G L + MDD +
Sbjct: 171 ETACPKLAPPQIIKLGQEKLIACGLSKRKSEYILDLAQHFVSGALHVDKWASMDDEDVIA 230
Query: 190 MLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKW 249
LT ++GIG W+ MF+IF+L +PDVLP+ DLG+ + + V Y E + EV W
Sbjct: 231 ELTQIRGIGRWTAEMFLIFNLSRPDVLPLDDLGLIRAISVNYFSGEPVTRSEAREVAANW 290
Query: 250 KPYRSVGSWYMWRLME 265
+P+R+V +WYMWR ++
Sbjct: 291 EPWRTVATWYMWRSLD 306
>gi|121600175|ref|YP_993470.1| DNA-3-methyladenine glycosylase [Burkholderia mallei SAVP1]
gi|126450820|ref|YP_001080978.1| base excision DNA repair protein [Burkholderia mallei NCTC 10247]
gi|126455439|ref|YP_001066848.1| base excision DNA repair protein [Burkholderia pseudomallei 1106a]
gi|134277779|ref|ZP_01764494.1| base excision DNA repair protein, HhH-GPD family [Burkholderia
pseudomallei 305]
gi|242314280|ref|ZP_04813296.1| base excision DNA repair protein, HhH-GPD family [Burkholderia
pseudomallei 1106b]
gi|251767522|ref|ZP_02267590.2| base excision DNA repair protein, HhH-GPD family [Burkholderia
mallei PRL-20]
gi|254197719|ref|ZP_04904141.1| base excision DNA repair protein, HhH-GPD family [Burkholderia
pseudomallei S13]
gi|254297084|ref|ZP_04964537.1| base excision DNA repair protein, HhH-GPD family [Burkholderia
pseudomallei 406e]
gi|386861245|ref|YP_006274194.1| base excision DNA repair protein [Burkholderia pseudomallei 1026b]
gi|418382653|ref|ZP_12966591.1| base excision DNA repair protein [Burkholderia pseudomallei 354a]
gi|418538403|ref|ZP_13104012.1| base excision DNA repair protein [Burkholderia pseudomallei 1026a]
gi|418540457|ref|ZP_13105996.1| base excision DNA repair protein [Burkholderia pseudomallei 1258a]
gi|418546706|ref|ZP_13111903.1| base excision DNA repair protein [Burkholderia pseudomallei 1258b]
gi|418552949|ref|ZP_13117792.1| base excision DNA repair protein [Burkholderia pseudomallei 354e]
gi|121228985|gb|ABM51503.1| DNA-3-methyladenine glycosylase [Burkholderia mallei SAVP1]
gi|126229081|gb|ABN92621.1| base excision DNA repair protein, HhH-GPD family [Burkholderia
pseudomallei 1106a]
gi|126243690|gb|ABO06783.1| base excision DNA repair protein, HhH-GPD family [Burkholderia
mallei NCTC 10247]
gi|134251429|gb|EBA51508.1| base excision DNA repair protein, HhH-GPD family [Burkholderia
pseudomallei 305]
gi|157806761|gb|EDO83931.1| base excision DNA repair protein, HhH-GPD family [Burkholderia
pseudomallei 406e]
gi|169654460|gb|EDS87153.1| base excision DNA repair protein, HhH-GPD family [Burkholderia
pseudomallei S13]
gi|242137519|gb|EES23921.1| base excision DNA repair protein, HhH-GPD family [Burkholderia
pseudomallei 1106b]
gi|243062483|gb|EES44669.1| base excision DNA repair protein, HhH-GPD family [Burkholderia
mallei PRL-20]
gi|261825992|gb|ABN02400.2| base excision DNA repair protein, HhH-GPD family [Burkholderia
mallei NCTC 10229]
gi|385347689|gb|EIF54339.1| base excision DNA repair protein [Burkholderia pseudomallei 1026a]
gi|385361809|gb|EIF67681.1| base excision DNA repair protein [Burkholderia pseudomallei 1258a]
gi|385363465|gb|EIF69239.1| base excision DNA repair protein [Burkholderia pseudomallei 1258b]
gi|385372358|gb|EIF77476.1| base excision DNA repair protein [Burkholderia pseudomallei 354e]
gi|385377133|gb|EIF81749.1| base excision DNA repair protein [Burkholderia pseudomallei 354a]
gi|385658373|gb|AFI65796.1| base excision DNA repair protein [Burkholderia pseudomallei 1026b]
Length = 312
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 66/196 (33%), Positives = 109/196 (55%), Gaps = 3/196 (1%)
Query: 70 DIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVAL 129
D A L +D +L LI P F++LA+S++ QQ++ AA+S++ V +
Sbjct: 114 DKACADLVKRDRILKKLIPKFGPAHLVKRGDSFVTLARSVVGQQISVAAAQSVW---VKI 170
Query: 130 FNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFK 189
+ P ++ + ++L G+S RK+ Y+ DLA+ + G L + MDD +
Sbjct: 171 ETACPKLAPPQIIKLGQEKLIACGLSKRKSEYILDLAQHFVSGALHVDKWASMDDEDVIA 230
Query: 190 MLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKW 249
LT ++GIG W+ MF+IF+L +PDVLP+ DLG+ + + V Y E + EV W
Sbjct: 231 ELTQIRGIGRWTAEMFLIFNLSRPDVLPLDDLGLIRAISVNYFSGEPVTRSEAREVAANW 290
Query: 250 KPYRSVGSWYMWRLME 265
+P+R+V +WYMWR ++
Sbjct: 291 EPWRTVATWYMWRSLD 306
>gi|53719851|ref|YP_108837.1| HhH-GPD superfamily base excision DNA repair protein [Burkholderia
pseudomallei K96243]
gi|76810257|ref|YP_334066.1| base excision DNA repair protein [Burkholderia pseudomallei 1710b]
gi|217420824|ref|ZP_03452329.1| base excision DNA repair protein, HhH-GPD family [Burkholderia
pseudomallei 576]
gi|226198847|ref|ZP_03794410.1| base excision DNA repair protein, HhH-GPD family [Burkholderia
pseudomallei Pakistan 9]
gi|254259512|ref|ZP_04950566.1| base excision DNA repair protein, HhH-GPD family [Burkholderia
pseudomallei 1710a]
gi|52210265|emb|CAH36244.1| HhH-GPD superfamily base excision DNA repair protein [Burkholderia
pseudomallei K96243]
gi|76579710|gb|ABA49185.1| base excision DNA repair protein, HhH-GPD family [Burkholderia
pseudomallei 1710b]
gi|217396236|gb|EEC36253.1| base excision DNA repair protein, HhH-GPD family [Burkholderia
pseudomallei 576]
gi|225928947|gb|EEH24971.1| base excision DNA repair protein, HhH-GPD family [Burkholderia
pseudomallei Pakistan 9]
gi|254218201|gb|EET07585.1| base excision DNA repair protein, HhH-GPD family [Burkholderia
pseudomallei 1710a]
Length = 312
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 66/196 (33%), Positives = 109/196 (55%), Gaps = 3/196 (1%)
Query: 70 DIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVAL 129
D A L +D +L LI P F++LA+S++ QQ++ AA+S++ V +
Sbjct: 114 DKACADLVKRDRILKKLIPKFGPAHLVKRGDSFVTLARSVVGQQISVAAAQSVW---VKI 170
Query: 130 FNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFK 189
+ P ++ + ++L G+S RK+ Y+ DLA+ + G L + MDD +
Sbjct: 171 ETACPKLAPPQIIKLGQEKLIACGLSKRKSEYILDLAQHFVSGALHVDKWASMDDEDVIA 230
Query: 190 MLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKW 249
LT ++GIG W+ MF+IF+L +PDVLP+ DLG+ + + V Y E + EV W
Sbjct: 231 ELTQIRGIGRWTAEMFLIFNLSRPDVLPLDDLGLIRAISVNYFSGEPVTRSEAREVAANW 290
Query: 250 KPYRSVGSWYMWRLME 265
+P+R+V +WYMWR ++
Sbjct: 291 EPWRTVATWYMWRSLD 306
>gi|423013778|ref|ZP_17004499.1| DNA-3-methyladenine glycosylase II [Achromobacter xylosoxidans
AXX-A]
gi|338783272|gb|EGP47640.1| DNA-3-methyladenine glycosylase II [Achromobacter xylosoxidans
AXX-A]
Length = 234
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 67/203 (33%), Positives = 112/203 (55%), Gaps = 3/203 (1%)
Query: 72 ALRHLRDKDPLLATLIDAHRPPTFES--SRSPFLSLAKSILYQQLAYKAAKSIYTRFVAL 129
A RHL D A + A P S +R P+ +L ++I YQQL +A +I R +AL
Sbjct: 32 AARHLAALDADWARHVQAIGPCLHASRPAREPYEALVRAIAYQQLHARAGDAILGRLLAL 91
Query: 130 FNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSD-ESIVEMDDVTMF 188
+ G+ P +L P+ R G S K + +R +A+ DG++ + + + M D +
Sbjct: 92 YPGQAFPRPRTLLDTDPEAQRACGFSATKLATIRGIAQAALDGVIPERDEALAMSDEALI 151
Query: 189 KMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEK 248
+ L +++G+G W+V M +I++L + D+LPV D GVR+G + L L + P +M + E
Sbjct: 152 ERLVALRGVGRWTVEMLLIYTLERMDILPVDDYGVREGYRRLKRLDKAPSPAQMRAIGEA 211
Query: 249 WKPYRSVGSWYMWRLMEAKGVLP 271
+ PYR++ +WY+WR+ A P
Sbjct: 212 FSPYRTIAAWYLWRMPAAPTASP 234
>gi|167563300|ref|ZP_02356216.1| DNA-3-methyladenine glycosylase [Burkholderia oklahomensis EO147]
Length = 279
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 67/196 (34%), Positives = 109/196 (55%), Gaps = 3/196 (1%)
Query: 70 DIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVAL 129
D A L +D +L LI P F++LA+S++ QQ++ AA+S++ V +
Sbjct: 81 DKACADLVKRDRILKKLIPKFGPAHLVKRGDSFVTLARSVVGQQISVAAAQSVW---VKI 137
Query: 130 FNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFK 189
+ P V+ + ++L G+S RK+ Y+ DLA+ + G L + MDD +
Sbjct: 138 ETACPKLAPPQVIKLGQEKLIACGLSKRKSEYILDLAQHFVSGALHVDKWATMDDEDVIA 197
Query: 190 MLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKW 249
LT ++GIG W+ MF+IF+L +PDVLP+ DLG+ + + V Y E + EV W
Sbjct: 198 ELTQIRGIGRWTAEMFLIFNLSRPDVLPLDDLGLIRAISVNYFSGEPVTRSEAREVAANW 257
Query: 250 KPYRSVGSWYMWRLME 265
+P+R+V +WYMWR ++
Sbjct: 258 EPWRTVATWYMWRSLD 273
>gi|254191451|ref|ZP_04897955.1| base excision DNA repair protein, HhH-GPD family [Burkholderia
pseudomallei Pasteur 52237]
gi|403519277|ref|YP_006653411.1| base excision DNA repair protein [Burkholderia pseudomallei BPC006]
gi|157939123|gb|EDO94793.1| base excision DNA repair protein, HhH-GPD family [Burkholderia
pseudomallei Pasteur 52237]
gi|403074920|gb|AFR16500.1| base excision DNA repair protein [Burkholderia pseudomallei BPC006]
Length = 295
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 66/196 (33%), Positives = 109/196 (55%), Gaps = 3/196 (1%)
Query: 70 DIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVAL 129
D A L +D +L LI P F++LA+S++ QQ++ AA+S++ V +
Sbjct: 97 DKACADLVKRDRILKKLIPKFGPAHLVKRGDSFVTLARSVVGQQISVAAAQSVW---VKI 153
Query: 130 FNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFK 189
+ P ++ + ++L G+S RK+ Y+ DLA+ + G L + MDD +
Sbjct: 154 ETACPKLAPPQIIKLGQEKLIACGLSKRKSEYILDLAQHFVSGALHVDKWASMDDEDVIA 213
Query: 190 MLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKW 249
LT ++GIG W+ MF+IF+L +PDVLP+ DLG+ + + V Y E + EV W
Sbjct: 214 ELTQIRGIGRWTAEMFLIFNLSRPDVLPLDDLGLIRAISVNYFSGEPVTRSEAREVAANW 273
Query: 250 KPYRSVGSWYMWRLME 265
+P+R+V +WYMWR ++
Sbjct: 274 EPWRTVATWYMWRSLD 289
>gi|167570472|ref|ZP_02363346.1| DNA-3-methyladenine glycosylase [Burkholderia oklahomensis C6786]
Length = 283
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 67/196 (34%), Positives = 109/196 (55%), Gaps = 3/196 (1%)
Query: 70 DIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVAL 129
D A L +D +L LI P F++LA+S++ QQ++ AA+S++ V +
Sbjct: 85 DKACADLVKRDRILKKLIPKFGPAHLVKRGDSFVTLARSVVGQQISVAAAQSVW---VKI 141
Query: 130 FNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFK 189
+ P V+ + ++L G+S RK+ Y+ DLA+ + G L + MDD +
Sbjct: 142 ETACPKLAPPQVIKLGQEKLIACGLSKRKSEYILDLAQHFVSGALHVDKWATMDDEDVIA 201
Query: 190 MLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKW 249
LT ++GIG W+ MF+IF+L +PDVLP+ DLG+ + + V Y E + EV W
Sbjct: 202 ELTQIRGIGRWTAEMFLIFNLSRPDVLPLDDLGLIRAISVNYFSGEPVTRSEAREVAANW 261
Query: 250 KPYRSVGSWYMWRLME 265
+P+R+V +WYMWR ++
Sbjct: 262 EPWRTVATWYMWRSLD 277
>gi|91784174|ref|YP_559380.1| HhH-GPD superfamily base excision DNA repair protein [Burkholderia
xenovorans LB400]
gi|91688128|gb|ABE31328.1| HhH-GPD superfamily base excision DNA repair protein [Burkholderia
xenovorans LB400]
Length = 281
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 116/210 (55%), Gaps = 7/210 (3%)
Query: 56 SPKIFKPLTFKGEVDIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLA 115
+P++ +P + D A L +D +L LI P S PF++LA+S++ QQ++
Sbjct: 73 TPEVTRPAYW----DKACADLVKRDRILKKLIPKFGPVHLLSRGDPFVTLARSVVGQQIS 128
Query: 116 YKAAKSIYTRFVALFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILS 175
+A++ + + A ++P + + ++L G+S RKA Y+ DLA+ + G L
Sbjct: 129 VASAQAAWAKVEAAC---PKLVPQQFIKLGLEKLTTCGLSKRKAEYVLDLAQHFVSGALH 185
Query: 176 DESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKE 235
M+D + LT ++GIG W+ MF+IF+L +PDVLP+ DLG+ + + V Y E
Sbjct: 186 VGKWTSMEDEAVIAELTQIRGIGRWTAEMFLIFNLSRPDVLPLDDLGLIRAISVNYFSGE 245
Query: 236 LPGALKMEEVCEKWKPYRSVGSWYMWRLME 265
+ EV W+P+R+V +WYMWR ++
Sbjct: 246 PVTRSEAREVAANWEPWRTVATWYMWRSLD 275
>gi|358387904|gb|EHK25498.1| hypothetical protein TRIVIDRAFT_229636 [Trichoderma virens Gv29-8]
Length = 410
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 79/227 (34%), Positives = 116/227 (51%), Gaps = 33/227 (14%)
Query: 72 ALRHLRDKDPLLATLIDAHR-----PPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRF 126
A HL D + LI+ H P PF SL SI+ QQ++ AAKSI +F
Sbjct: 176 ACDHLIKVDERMRPLIEKHHCRSFSPEGLAEKIDPFESLVSSIISQQVSGAAAKSIQNKF 235
Query: 127 VALFNGEDNI-----------------LPDAVLAVSPQQLREIGVSYRKASYLRDLAEKY 169
+ALF+ E +P V A S ++LR G+S RKA Y++ LAEK+
Sbjct: 236 IALFSPEGGDAPSQPADGDSSSEKRFPIPSEVAACSIERLRTAGLSQRKAEYVQGLAEKF 295
Query: 170 TDGILSDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQV 229
G ++ + + + + + L +V+G+G WSV MF F+L + DV +GDLGV++G+
Sbjct: 296 ASGEITAQMLHDAPYEELMEKLIAVRGLGKWSVEMFACFALKRMDVFSLGDLGVQRGMAA 355
Query: 230 LYG-----LKELPGALK------MEEVCEKWKPYRSVGSWYMWRLME 265
G LK G K M E+ +K+ PYRS+ WYMW++ E
Sbjct: 356 FVGRDVAKLKSKGGKWKYMSEQDMVELSDKFTPYRSLFMWYMWKVEE 402
>gi|124385111|ref|YP_001029098.1| DNA-3-methyladenine glycosylase [Burkholderia mallei NCTC 10229]
gi|254178531|ref|ZP_04885186.1| base excision DNA repair protein, HhH-GPD family [Burkholderia
mallei ATCC 10399]
gi|254184418|ref|ZP_04891008.1| base excision DNA repair protein, HhH-GPD family [Burkholderia
pseudomallei 1655]
gi|254200233|ref|ZP_04906599.1| base excision DNA repair protein, HhH-GPD family [Burkholderia
mallei FMH]
gi|254209313|ref|ZP_04915659.1| base excision DNA repair protein, HhH-GPD family [Burkholderia
mallei JHU]
gi|254358018|ref|ZP_04974291.1| base excision DNA repair protein, HhH-GPD family [Burkholderia
mallei 2002721280]
gi|147749829|gb|EDK56903.1| base excision DNA repair protein, HhH-GPD family [Burkholderia
mallei FMH]
gi|147750086|gb|EDK57157.1| base excision DNA repair protein, HhH-GPD family [Burkholderia
mallei JHU]
gi|148027145|gb|EDK85166.1| base excision DNA repair protein, HhH-GPD family [Burkholderia
mallei 2002721280]
gi|160699570|gb|EDP89540.1| base excision DNA repair protein, HhH-GPD family [Burkholderia
mallei ATCC 10399]
gi|184214949|gb|EDU11992.1| base excision DNA repair protein, HhH-GPD family [Burkholderia
pseudomallei 1655]
Length = 295
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 66/196 (33%), Positives = 109/196 (55%), Gaps = 3/196 (1%)
Query: 70 DIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVAL 129
D A L +D +L LI P F++LA+S++ QQ++ AA+S++ V +
Sbjct: 97 DKACADLVKRDRILKKLIPKFGPAHLVKRGDSFVTLARSVVGQQISVAAAQSVW---VKI 153
Query: 130 FNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFK 189
+ P ++ + ++L G+S RK+ Y+ DLA+ + G L + MDD +
Sbjct: 154 ETACPKLAPPQIIKLGQEKLIACGLSKRKSEYILDLAQHFVSGALHVDKWASMDDEDVIA 213
Query: 190 MLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKW 249
LT ++GIG W+ MF+IF+L +PDVLP+ DLG+ + + V Y E + EV W
Sbjct: 214 ELTQIRGIGRWTAEMFLIFNLSRPDVLPLDDLGLIRAISVNYFSGEPVTRSEAREVAANW 273
Query: 250 KPYRSVGSWYMWRLME 265
+P+R+V +WYMWR ++
Sbjct: 274 EPWRTVATWYMWRSLD 289
>gi|107028743|ref|YP_625838.1| DNA-3-methyladenine glycosylase II [Burkholderia cenocepacia AU
1054]
gi|116690098|ref|YP_835721.1| DNA-3-methyladenine glycosylase II [Burkholderia cenocepacia
HI2424]
gi|254247827|ref|ZP_04941148.1| DNA-3-methyladenine glycosylase II [Burkholderia cenocepacia PC184]
gi|105897907|gb|ABF80865.1| DNA-3-methyladenine glycosylase II [Burkholderia cenocepacia AU
1054]
gi|116648187|gb|ABK08828.1| DNA-3-methyladenine glycosylase II [Burkholderia cenocepacia
HI2424]
gi|124872603|gb|EAY64319.1| DNA-3-methyladenine glycosylase II [Burkholderia cenocepacia PC184]
Length = 275
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 116/217 (53%), Gaps = 7/217 (3%)
Query: 50 STNSDNSPKIFKPLTFKGEVDIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSI 109
++ +D + +P + D A L +D +L LI P PF++LA+S+
Sbjct: 61 ASEADGEEGVVRPAYW----DKACADLVKRDRILKKLIPKFGPAHLVKRGDPFVTLARSV 116
Query: 110 LYQQLAYKAAKSIYTRFVALFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKY 169
+ QQ++ +A+S++ R + + + P V+ + +L G+S RK Y+ DLA+ +
Sbjct: 117 VGQQISVPSAQSLWAR---IEDACPKLAPQPVIRLGADKLIACGLSKRKTEYILDLAQHF 173
Query: 170 TDGILSDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQV 229
G L + MDD + LT ++GI W+ MF+IF+L +PDVLP+ D G+ + + V
Sbjct: 174 VSGALHVDKWTSMDDEDVIAELTQIRGISRWTAEMFLIFNLSRPDVLPLDDPGLIRAISV 233
Query: 230 LYGLKELPGALKMEEVCEKWKPYRSVGSWYMWRLMEA 266
Y E + EV W+P+R+V +WYMWR ++A
Sbjct: 234 NYFSGEPVTRSEAREVAANWEPWRTVATWYMWRSLDA 270
>gi|121605783|ref|YP_983112.1| HhH-GPD family protein [Polaromonas naphthalenivorans CJ2]
gi|120594752|gb|ABM38191.1| HhH-GPD family protein [Polaromonas naphthalenivorans CJ2]
Length = 246
Score = 128 bits (321), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 70/196 (35%), Positives = 107/196 (54%), Gaps = 3/196 (1%)
Query: 72 ALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFN 131
A +HL KD ++ LI +S F +LA+SI+ QQ++ KAA++++ RF AL
Sbjct: 49 ACKHLVKKDRVMKRLIPKLGNSCLQSRGDAFSTLARSIIGQQISVKAAQTVWHRFAAL-- 106
Query: 132 GEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKML 191
+ P VL + +R G+S RK YL DLA + G + + EMDD + L
Sbjct: 107 -AVEMTPAHVLRLKVDDMRATGLSLRKVEYLVDLAINFDAGSIHVQDWQEMDDEAIIAEL 165
Query: 192 TSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKP 251
+++GIG W+ MF++F L +P+VLP+ D+G+ G+ Y E EV W P
Sbjct: 166 VAIRGIGRWTAEMFLMFYLTRPNVLPLDDVGLISGISRNYFSGESVSRSDAREVAAAWAP 225
Query: 252 YRSVGSWYMWRLMEAK 267
Y SV +WY+WR ++ K
Sbjct: 226 YCSVATWYIWRSLDPK 241
>gi|167720282|ref|ZP_02403518.1| DNA-3-methyladenine glycosylase [Burkholderia pseudomallei DM98]
Length = 232
Score = 128 bits (321), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 66/196 (33%), Positives = 109/196 (55%), Gaps = 3/196 (1%)
Query: 70 DIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVAL 129
D A L +D +L LI P F++LA+S++ QQ++ AA+S++ V +
Sbjct: 34 DKACADLVKRDRILKKLIPKFGPAHLVKRGDSFVTLARSVVGQQISVAAAQSVW---VKI 90
Query: 130 FNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFK 189
+ P ++ + ++L G+S RK+ Y+ DLA+ + G L + MDD +
Sbjct: 91 ETACPKLAPPQIIKLGQEKLIACGLSKRKSEYILDLAQHFVSGALHVDKWASMDDEDVIA 150
Query: 190 MLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKW 249
LT ++GIG W+ MF+IF+L +PDVLP+ DLG+ + + V Y E + EV W
Sbjct: 151 ELTQIRGIGRWTAEMFLIFNLSRPDVLPLDDLGLIRAISVNYFSGEPVTRSEAREVAANW 210
Query: 250 KPYRSVGSWYMWRLME 265
+P+R+V +WYMWR ++
Sbjct: 211 EPWRTVATWYMWRSLD 226
>gi|206560513|ref|YP_002231277.1| HhH-GPD superfamily base excision DNA repair protein [Burkholderia
cenocepacia J2315]
gi|444358638|ref|ZP_21160028.1| base excision DNA repair protein, HhH-GPD family [Burkholderia
cenocepacia BC7]
gi|444371561|ref|ZP_21171111.1| base excision DNA repair protein, HhH-GPD family [Burkholderia
cenocepacia K56-2Valvano]
gi|198036554|emb|CAR52451.1| HhH-GPD superfamily base excision DNA repair protein [Burkholderia
cenocepacia J2315]
gi|443595168|gb|ELT63770.1| base excision DNA repair protein, HhH-GPD family [Burkholderia
cenocepacia K56-2Valvano]
gi|443603682|gb|ELT71673.1| base excision DNA repair protein, HhH-GPD family [Burkholderia
cenocepacia BC7]
Length = 275
Score = 128 bits (321), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 117/217 (53%), Gaps = 7/217 (3%)
Query: 50 STNSDNSPKIFKPLTFKGEVDIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSI 109
++ +D + +P + D A L +D +L LI P PF++LA+S+
Sbjct: 61 ASEADGEEVVVRPAYW----DKACADLVKRDRILKKLIPKFGPAHLVKRGDPFVTLARSV 116
Query: 110 LYQQLAYKAAKSIYTRFVALFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKY 169
+ QQ++ +A+S++ R + + + P V+ + +L G+S RK Y+ DLA+ +
Sbjct: 117 VGQQISVPSAQSLWAR---IEDACPKLAPQPVIRLGADKLIACGLSKRKTEYILDLAQHF 173
Query: 170 TDGILSDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQV 229
G L + + MDD + LT ++GI W+ MF+IF+L +PDVLP+ D G+ + + V
Sbjct: 174 VSGALHVDKWMSMDDEDVIAELTQIRGISRWTAEMFLIFNLSRPDVLPLDDPGLIRAISV 233
Query: 230 LYGLKELPGALKMEEVCEKWKPYRSVGSWYMWRLMEA 266
Y E + EV W+P+R+V +WYMWR ++A
Sbjct: 234 NYFSGEPVTRSEAREVAANWEPWRTVATWYMWRSLDA 270
>gi|167903371|ref|ZP_02490576.1| DNA-3-methyladenine glycosylase [Burkholderia pseudomallei NCTC
13177]
Length = 259
Score = 128 bits (321), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 66/196 (33%), Positives = 109/196 (55%), Gaps = 3/196 (1%)
Query: 70 DIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVAL 129
D A L +D +L LI P F++LA+S++ QQ++ AA+S++ V +
Sbjct: 61 DKACADLVKRDRILKKLIPKFGPAHLVKRGDSFVTLARSVVGQQISVAAAQSVW---VKI 117
Query: 130 FNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFK 189
+ P ++ + ++L G+S RK+ Y+ DLA+ + G L + MDD +
Sbjct: 118 ETACPKLAPPQIIKLGQEKLIACGLSKRKSEYILDLAQHFVSGALHVDKWASMDDEDVIA 177
Query: 190 MLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKW 249
LT ++GIG W+ MF+IF+L +PDVLP+ DLG+ + + V Y E + EV W
Sbjct: 178 ELTQIRGIGRWTAEMFLIFNLSRPDVLPLDDLGLIRAISVNYFSGEPVTRSEAREVAANW 237
Query: 250 KPYRSVGSWYMWRLME 265
+P+R+V +WYMWR ++
Sbjct: 238 EPWRTVATWYMWRSLD 253
>gi|167830051|ref|ZP_02461522.1| DNA-3-methyladenine glycosylase [Burkholderia pseudomallei 9]
Length = 230
Score = 128 bits (321), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 66/196 (33%), Positives = 109/196 (55%), Gaps = 3/196 (1%)
Query: 70 DIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVAL 129
D A L +D +L LI P F++LA+S++ QQ++ AA+S++ V +
Sbjct: 32 DKACADLVKRDRILKKLIPKFGPAHLVKRGDSFVTLARSVVGQQISVAAAQSVW---VKI 88
Query: 130 FNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFK 189
+ P ++ + ++L G+S RK+ Y+ DLA+ + G L + MDD +
Sbjct: 89 ETACPKLAPPQIIKLGQEKLIACGLSKRKSEYILDLAQHFVSGALHVDKWASMDDEDVIA 148
Query: 190 MLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKW 249
LT ++GIG W+ MF+IF+L +PDVLP+ DLG+ + + V Y E + EV W
Sbjct: 149 ELTQIRGIGRWTAEMFLIFNLSRPDVLPLDDLGLIRAISVNYFSGEPVTRSEAREVAANW 208
Query: 250 KPYRSVGSWYMWRLME 265
+P+R+V +WYMWR ++
Sbjct: 209 EPWRTVATWYMWRSLD 224
>gi|307129702|ref|YP_003881718.1| DNA-3-methyladenine glycosylase II [Dickeya dadantii 3937]
gi|306527231|gb|ADM97161.1| DNA-3-methyladenine glycosylase II [Dickeya dadantii 3937]
Length = 224
Score = 128 bits (321), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 69/197 (35%), Positives = 114/197 (57%), Gaps = 5/197 (2%)
Query: 72 ALRHLRDKDPLLATLIDAHRPPTFES--SRSPFLSLAKSILYQQLAYKAAKSIYTRFVAL 129
AL HL D A LID FES +R P+ +L +++ QQL+ +AA +I +
Sbjct: 13 ALAHLAAIDAHWARLIDGVGHIRFESRPAREPYDALIRAVASQQLSNRAAAAIIGKLQQR 72
Query: 130 FNGEDNILP--DAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVE-MDDVT 186
F +N P D + P+ LR+ G S RK ++ +A+ +G++ + E +DD T
Sbjct: 73 FAVGENGFPSADQLATCEPEVLRQCGFSARKIDTVKGIAQGVQNGLVPSRAEAEHLDDET 132
Query: 187 MFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVC 246
+ + L ++KGIG W+V M +I +L + D++PV DLG+++G + LY L + P M E+
Sbjct: 133 LIERLCTLKGIGRWTVEMLLISTLERMDIMPVDDLGIKQGFRYLYRLPQDPTRKAMLEMS 192
Query: 247 EKWKPYRSVGSWYMWRL 263
E +PYR++ +WY+WR+
Sbjct: 193 EACRPYRTLAAWYLWRI 209
>gi|365087918|ref|ZP_09327676.1| HhH-GPD family protein [Acidovorax sp. NO-1]
gi|363417354|gb|EHL24435.1| HhH-GPD family protein [Acidovorax sp. NO-1]
Length = 223
Score = 128 bits (321), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 68/194 (35%), Positives = 109/194 (56%), Gaps = 3/194 (1%)
Query: 72 ALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFN 131
A +HL KD ++ LI ++ F +LA+SI+ QQ++ KAA++++ RF AL
Sbjct: 27 ACKHLVKKDRVMKRLIPQFGDAALQTRGDAFTTLARSIVGQQVSVKAAQTVWERFAAL-- 84
Query: 132 GEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKML 191
++ P +VL + +R G+S RK YL DLA + G L + MDD + L
Sbjct: 85 -PRSMKPASVLKLKIDDMRAAGLSARKVDYLVDLAMHFEGGKLHVKDWAAMDDEAIIAEL 143
Query: 192 TSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKP 251
+++GIG W+ MF+IF + +P+VLP+ D+G+ G+ Y + EV E WKP
Sbjct: 144 VAIRGIGRWTAEMFLIFYMMRPNVLPLDDVGLINGISQNYFSGDPVSRSDAREVAEAWKP 203
Query: 252 YRSVGSWYMWRLME 265
+ SV +WY+WR ++
Sbjct: 204 WCSVATWYIWRSLD 217
>gi|421870247|ref|ZP_16301882.1| HhH-GPD base excision DNA repair family protein; putative
3-methyladenine DNA glycosylase/8-oxoguanine DNA
glycosylase [Burkholderia cenocepacia H111]
gi|358069773|emb|CCE52760.1| HhH-GPD base excision DNA repair family protein; putative
3-methyladenine DNA glycosylase/8-oxoguanine DNA
glycosylase [Burkholderia cenocepacia H111]
Length = 275
Score = 128 bits (321), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 117/217 (53%), Gaps = 7/217 (3%)
Query: 50 STNSDNSPKIFKPLTFKGEVDIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSI 109
++ +D + +P + D A L +D +L LI P PF++LA+S+
Sbjct: 61 ASEADGEEVVVRPAYW----DKACADLVKRDRILKKLIPKFGPAHLVKRGDPFVTLARSV 116
Query: 110 LYQQLAYKAAKSIYTRFVALFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKY 169
+ QQ++ +A+S++ R + + + P V+ + +L G+S RK Y+ DLA+ +
Sbjct: 117 VGQQISVPSAQSLWAR---IEDACPKLAPQPVIRLGADKLIACGLSKRKTEYILDLAQHF 173
Query: 170 TDGILSDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQV 229
G L + + MDD + LT ++GI W+ MF+IF+L +PDVLP+ D G+ + + V
Sbjct: 174 VSGALHVDKWMSMDDEDVIAELTQIRGISRWTAEMFLIFNLSRPDVLPLDDPGLIRAISV 233
Query: 230 LYGLKELPGALKMEEVCEKWKPYRSVGSWYMWRLMEA 266
Y E + EV W+P+R+V +WYMWR ++A
Sbjct: 234 NYFSGEPVTRSEAREVAANWEPWRTVATWYMWRSLDA 270
>gi|330813269|ref|YP_004357508.1| drug/metabolite transporter [Candidatus Pelagibacter sp. IMCC9063]
gi|327486364|gb|AEA80769.1| drug/metabolite transporter (dmt superfamily) [Candidatus
Pelagibacter sp. IMCC9063]
Length = 205
Score = 128 bits (321), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 63/169 (37%), Positives = 100/169 (59%), Gaps = 3/169 (1%)
Query: 97 SSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNILPDAVLAVSPQQLREIGVSY 156
S PF SL +SI+ QQ++ ++A S++ +F + I+P +L +S QL G+S
Sbjct: 34 SRNDPFFSLCRSIIGQQISVQSADSVWKKFS---HKAKKIIPKNILNLSKSQLSSCGLSR 90
Query: 157 RKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVL 216
+K YL+ LA+K+ D + + + EMDD K L+ VKGIG W+ MF+ F+ +PD+
Sbjct: 91 QKIEYLKILAKKFDDKSIDIKKLKEMDDEEAIKYLSEVKGIGRWTAEMFLFFNQLRPDIY 150
Query: 217 PVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSWYMWRLME 265
PV D+G+ K + Y P K+EE+ + W PY +V +WYMWR ++
Sbjct: 151 PVQDIGLLKAISKNYKTAYPPPQKKIEELKKLWSPYATVATWYMWRSID 199
>gi|167759409|ref|ZP_02431536.1| hypothetical protein CLOSCI_01756 [Clostridium scindens ATCC 35704]
gi|336420916|ref|ZP_08601077.1| hypothetical protein HMPREF0993_00454 [Lachnospiraceae bacterium
5_1_57FAA]
gi|167662966|gb|EDS07096.1| base excision DNA repair protein, HhH-GPD family [Clostridium
scindens ATCC 35704]
gi|336003935|gb|EGN34011.1| hypothetical protein HMPREF0993_00454 [Lachnospiraceae bacterium
5_1_57FAA]
Length = 203
Score = 128 bits (321), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 70/203 (34%), Positives = 112/203 (55%), Gaps = 6/203 (2%)
Query: 70 DIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVAL 129
D + +L+ KD L ID E F S+ I+ QQ++ A +++ RF +
Sbjct: 7 DTEIEYLKRKDKKLGEAIDHIGHIYREVDADIFQSVVHQIIGQQISNAALATVWGRFRNM 66
Query: 130 FNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFK 189
+ P AVL ++L+ +G+S+RKA Y+R+ AEK G L E + +MDD + K
Sbjct: 67 VG---EVTPQAVLKYQAEELKGLGMSFRKAEYIRNFAEKVCQGELDLEELCQMDDQKVIK 123
Query: 190 MLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKW 249
L+S++GIG W+ M +IF + +PDVL GD + KG+Q+LY +++ L E+ +++
Sbjct: 124 TLSSLRGIGVWTAEMLLIFCMQRPDVLSYGDGAILKGMQILYHHRKMDKNL-FEKYRKRY 182
Query: 250 KPYRSVGSWYMWRLMEAKGVLPN 272
PY SV S Y+W + A G L
Sbjct: 183 SPYGSVASLYLWAI--AGGALEG 203
>gi|167739280|ref|ZP_02412054.1| DNA-3-methyladenine glycosylase [Burkholderia pseudomallei 14]
Length = 238
Score = 128 bits (321), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 66/196 (33%), Positives = 109/196 (55%), Gaps = 3/196 (1%)
Query: 70 DIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVAL 129
D A L +D +L LI P F++LA+S++ QQ++ AA+S++ V +
Sbjct: 40 DKACADLVKRDRILKKLIPKFGPAHLVKRGDSFVTLARSVVGQQISVAAAQSVW---VKI 96
Query: 130 FNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFK 189
+ P ++ + ++L G+S RK+ Y+ DLA+ + G L + MDD +
Sbjct: 97 ETACPKLAPPQIIKLGQEKLIACGLSKRKSEYILDLAQHFVSGALHVDKWASMDDEDVIA 156
Query: 190 MLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKW 249
LT ++GIG W+ MF+IF+L +PDVLP+ DLG+ + + V Y E + EV W
Sbjct: 157 ELTQIRGIGRWTAEMFLIFNLSRPDVLPLDDLGLIRAISVNYFSGEPVTRSEAREVAANW 216
Query: 250 KPYRSVGSWYMWRLME 265
+P+R+V +WYMWR ++
Sbjct: 217 EPWRTVATWYMWRSLD 232
>gi|167916724|ref|ZP_02503815.1| DNA-3-methyladenine glycosylase [Burkholderia pseudomallei 112]
Length = 226
Score = 128 bits (321), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 66/196 (33%), Positives = 109/196 (55%), Gaps = 3/196 (1%)
Query: 70 DIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVAL 129
D A L +D +L LI P F++LA+S++ QQ++ AA+S++ V +
Sbjct: 28 DKACADLVKRDRILKKLIPKFGPAHLVKRGDSFVTLARSVVGQQISVAAAQSVW---VKI 84
Query: 130 FNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFK 189
+ P ++ + ++L G+S RK+ Y+ DLA+ + G L + MDD +
Sbjct: 85 ETACPKLAPPQIIKLGQEKLIACGLSKRKSEYILDLAQHFVSGALHVDKWASMDDEDVIA 144
Query: 190 MLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKW 249
LT ++GIG W+ MF+IF+L +PDVLP+ DLG+ + + V Y E + EV W
Sbjct: 145 ELTQIRGIGRWTAEMFLIFNLSRPDVLPLDDLGLIRAISVNYFSGEPVTRSEAREVAANW 204
Query: 250 KPYRSVGSWYMWRLME 265
+P+R+V +WYMWR ++
Sbjct: 205 EPWRTVATWYMWRSLD 220
>gi|167894986|ref|ZP_02482388.1| DNA-3-methyladenine glycosylase [Burkholderia pseudomallei 7894]
Length = 234
Score = 128 bits (321), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 66/196 (33%), Positives = 109/196 (55%), Gaps = 3/196 (1%)
Query: 70 DIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVAL 129
D A L +D +L LI P F++LA+S++ QQ++ AA+S++ V +
Sbjct: 36 DKACADLVKRDRILKKLIPKFGPAHLVKRGDSFVTLARSVVGQQISVAAAQSVW---VKI 92
Query: 130 FNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFK 189
+ P ++ + ++L G+S RK+ Y+ DLA+ + G L + MDD +
Sbjct: 93 ETACPKLAPPQIIKLGQEKLIACGLSKRKSEYILDLAQHFVSGALHVDKWASMDDEDVIA 152
Query: 190 MLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKW 249
LT ++GIG W+ MF+IF+L +PDVLP+ DLG+ + + V Y E + EV W
Sbjct: 153 ELTQIRGIGRWTAEMFLIFNLSRPDVLPLDDLGLIRAISVNYFSGEPVTRSEAREVAANW 212
Query: 250 KPYRSVGSWYMWRLME 265
+P+R+V +WYMWR ++
Sbjct: 213 EPWRTVATWYMWRSLD 228
>gi|167816495|ref|ZP_02448175.1| DNA-3-methyladenine glycosylase [Burkholderia pseudomallei 91]
gi|167919624|ref|ZP_02506715.1| DNA-3-methyladenine glycosylase [Burkholderia pseudomallei BCC215]
Length = 235
Score = 128 bits (321), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 66/196 (33%), Positives = 109/196 (55%), Gaps = 3/196 (1%)
Query: 70 DIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVAL 129
D A L +D +L LI P F++LA+S++ QQ++ AA+S++ V +
Sbjct: 37 DKACADLVKRDRILKKLIPKFGPAHLVKRGDSFVTLARSVVGQQISVAAAQSVW---VKI 93
Query: 130 FNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFK 189
+ P ++ + ++L G+S RK+ Y+ DLA+ + G L + MDD +
Sbjct: 94 ETACPKLAPPQIIKLGQEKLIACGLSKRKSEYILDLAQHFVSGALHVDKWASMDDEDVIA 153
Query: 190 MLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKW 249
LT ++GIG W+ MF+IF+L +PDVLP+ DLG+ + + V Y E + EV W
Sbjct: 154 ELTQIRGIGRWTAEMFLIFNLSRPDVLPLDDLGLIRAISVNYFSGEPVTRSEAREVAANW 213
Query: 250 KPYRSVGSWYMWRLME 265
+P+R+V +WYMWR ++
Sbjct: 214 EPWRTVATWYMWRSLD 229
>gi|383765668|ref|YP_005444649.1| DNA-3-methyladenine glycosylase II [Phycisphaera mikurensis NBRC
102666]
gi|381385936|dbj|BAM02752.1| DNA-3-methyladenine glycosylase II [Phycisphaera mikurensis NBRC
102666]
Length = 249
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 71/202 (35%), Positives = 106/202 (52%), Gaps = 10/202 (4%)
Query: 70 DIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVAL 129
D R LR DP L LI + P F R F LA+++ QQL+ K A +++ RF A
Sbjct: 10 DAGTRALR-TDPHLGPLIASAPPCPFAPERGVFRRLARAVFAQQLSAKGAATLFARFEAH 68
Query: 130 FNGEDNILPDAVLA------VSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMD 183
P +VLA + LR G+S +K SYL DLAE + G L + M
Sbjct: 69 AG---RATPASVLAACRDGSLDDDTLRFCGLSRQKKSYLVDLAEHFAGGRLDARKLNRMG 125
Query: 184 DVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKME 243
D LT+V+G+G W+ M++IF +PDV PV DL +R + GL + P A +
Sbjct: 126 DDEAVAALTAVRGVGRWTAQMWLIFGAARPDVWPVDDLAIRIATGRVLGLAQRPTARETA 185
Query: 244 EVCEKWKPYRSVGSWYMWRLME 265
+ E+W+P+R++ +W +WR ++
Sbjct: 186 AIGERWRPHRTLAAWLLWRSLD 207
>gi|187478706|ref|YP_786730.1| DNA-3-methyladenine glycosylase [Bordetella avium 197N]
gi|115423292|emb|CAJ49825.1| DNA-3-methyladenine glycosylase [Bordetella avium 197N]
Length = 208
Score = 127 bits (320), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 68/195 (34%), Positives = 109/195 (55%), Gaps = 5/195 (2%)
Query: 72 ALRHLRDKDPLLATLIDAHRPPTFES--SRSPFLSLAKSILYQQLAYKAAKSIYTRFVAL 129
A R L D A L+ P E+ R P+ +L ++I YQQL KA +I R AL
Sbjct: 9 ASRFLASLDEDWARLVCTVGPCRLETRPDREPYEALLRAIAYQQLHAKAGDAILLRLQAL 68
Query: 130 FNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGIL-SDESIVEMDDVTMF 188
P +LA P+ LR G S K + +R +A+ DG++ + E + +DD ++
Sbjct: 69 AGCFPR--PAQLLATKPELLRACGFSAAKLATVRGIAQAALDGLVPTREEALRLDDESLI 126
Query: 189 KMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEK 248
+ L ++KG+G W+V M +I++L +PD+LP D GVR+G + L L + P M E+ +
Sbjct: 127 ERLVTLKGVGRWTVEMLLIYTLERPDILPADDFGVREGYRRLKRLAQAPTPRAMREIGQD 186
Query: 249 WKPYRSVGSWYMWRL 263
W+P+R+ +WY+WR+
Sbjct: 187 WQPWRTAATWYLWRM 201
>gi|167846405|ref|ZP_02471913.1| DNA-3-methyladenine glycosylase [Burkholderia pseudomallei B7210]
Length = 241
Score = 127 bits (320), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 66/196 (33%), Positives = 109/196 (55%), Gaps = 3/196 (1%)
Query: 70 DIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVAL 129
D A L +D +L LI P F++LA+S++ QQ++ AA+S++ V +
Sbjct: 43 DKACADLVKRDRILKKLIPKFGPAHLVKRGDSFVTLARSVVGQQISVAAAQSVW---VKI 99
Query: 130 FNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFK 189
+ P ++ + ++L G+S RK+ Y+ DLA+ + G L + MDD +
Sbjct: 100 ETACPKLAPPQIIKLGQEKLIACGLSKRKSEYILDLAQHFVSGALHVDKWASMDDEDVIA 159
Query: 190 MLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKW 249
LT ++GIG W+ MF+IF+L +PDVLP+ DLG+ + + V Y E + EV W
Sbjct: 160 ELTQIRGIGRWTAEMFLIFNLSRPDVLPLDDLGLIRAISVNYFSGEPVTRSEAREVAANW 219
Query: 250 KPYRSVGSWYMWRLME 265
+P+R+V +WYMWR ++
Sbjct: 220 EPWRTVATWYMWRSLD 235
>gi|53723756|ref|YP_103281.1| DNA-3-methyladenine glycosylase [Burkholderia mallei ATCC 23344]
gi|52427179|gb|AAU47772.1| DNA-3-methyladenine glycosylase [Burkholderia mallei ATCC 23344]
Length = 221
Score = 127 bits (320), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 66/196 (33%), Positives = 109/196 (55%), Gaps = 3/196 (1%)
Query: 70 DIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVAL 129
D A L +D +L LI P F++LA+S++ QQ++ AA+S++ V +
Sbjct: 23 DKACADLVKRDRILKKLIPKFGPAHLVKRGDSFVTLARSVVGQQISVAAAQSVW---VKI 79
Query: 130 FNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFK 189
+ P ++ + ++L G+S RK+ Y+ DLA+ + G L + MDD +
Sbjct: 80 ETACPKLAPPQIIKLGQEKLIACGLSKRKSEYILDLAQHFVSGALHVDKWASMDDEDVIA 139
Query: 190 MLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKW 249
LT ++GIG W+ MF+IF+L +PDVLP+ DLG+ + + V Y E + EV W
Sbjct: 140 ELTQIRGIGRWTAEMFLIFNLSRPDVLPLDDLGLIRAISVNYFSGEPVTRSEAREVAANW 199
Query: 250 KPYRSVGSWYMWRLME 265
+P+R+V +WYMWR ++
Sbjct: 200 EPWRTVATWYMWRSLD 215
>gi|334341767|ref|YP_004546747.1| HhH-GPD family protein [Desulfotomaculum ruminis DSM 2154]
gi|334093121|gb|AEG61461.1| HhH-GPD family protein [Desulfotomaculum ruminis DSM 2154]
Length = 210
Score = 127 bits (320), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 74/197 (37%), Positives = 113/197 (57%), Gaps = 3/197 (1%)
Query: 65 FKGEVDIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYT 124
F ++D A+++L D LA LI T F SLA++I+ QQL+ KA ++I+
Sbjct: 8 FHQDMD-AVQYLMASDARLAALIKEIGDYTLVLREDYFASLARAIIGQQLSVKAVETIWM 66
Query: 125 RFVALFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDD 184
R V L G+ + P+++ ++ +QL+ G+S K SYL DL +K G L + I + D
Sbjct: 67 RTVHLCGGQ--VGPESLTELTEEQLQGAGLSKAKVSYLWDLQQKILAGELCFKEICHLSD 124
Query: 185 VTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEE 244
+ LT VKGIG W+ MF+IFSL + +V V D+G+R+ ++ LY L E P +M+
Sbjct: 125 EEVVTALTRVKGIGRWTAEMFLIFSLGRSNVWAVDDVGLRRAVKWLYRLDETPTGNEMKS 184
Query: 245 VCEKWKPYRSVGSWYMW 261
+W PY SV S Y+W
Sbjct: 185 YGTRWSPYSSVASLYLW 201
>gi|78066852|ref|YP_369621.1| 3-methyladenine DNA glycosylase [Burkholderia sp. 383]
gi|77967597|gb|ABB08977.1| 3-methyladenine DNA glycosylase/8- oxoguanineDNA glycosylase
[Burkholderia sp. 383]
Length = 275
Score = 127 bits (320), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 115/216 (53%), Gaps = 7/216 (3%)
Query: 51 TNSDNSPKIFKPLTFKGEVDIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSIL 110
+ +D + +P + D A L +D +L LI P PF++LA+S++
Sbjct: 62 SETDGEEVVVRPAYW----DKACADLVKRDRILKKLIPKFGPAHLVKRGDPFVTLARSVV 117
Query: 111 YQQLAYKAAKSIYTRFVALFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYT 170
QQ++ +A+S++ R + + + P V+ + +L G+S RK Y+ DLA+ +
Sbjct: 118 GQQISVPSAQSLWAR---IGDACPKLAPQPVIRLGADKLIACGLSKRKTEYILDLAQHFV 174
Query: 171 DGILSDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVL 230
G L + MDD + LT ++GI W+ MF+IF+L +PDVLP+ D G+ + + V
Sbjct: 175 SGALHVDKWTSMDDEDVIAELTQIRGISRWTAEMFLIFNLSRPDVLPLDDPGLIRAISVN 234
Query: 231 YGLKELPGALKMEEVCEKWKPYRSVGSWYMWRLMEA 266
Y E + EV W+P+R+V +WYMWR ++A
Sbjct: 235 YFSGEPVTRSEAREVAANWEPWRTVATWYMWRSLDA 270
>gi|126439834|ref|YP_001059570.1| base excision DNA repair protein [Burkholderia pseudomallei 668]
gi|126219327|gb|ABN82833.1| base excision DNA repair protein, HhH-GPD family [Burkholderia
pseudomallei 668]
Length = 312
Score = 127 bits (320), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 66/196 (33%), Positives = 108/196 (55%), Gaps = 3/196 (1%)
Query: 70 DIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVAL 129
D A L +D +L LI P F++LA+S++ QQ++ AA+S++ V +
Sbjct: 114 DKACADLVKRDRILKKLIPKFGPAHLVKRGDSFVTLARSVVGQQISVAAAQSVW---VKI 170
Query: 130 FNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFK 189
+ P ++ + ++L G+S RK+ Y+ DLA + G L + MDD +
Sbjct: 171 ETACPKLAPPQIIKLGQEKLIACGLSKRKSEYILDLARHFVSGALHVDKWASMDDEDVIA 230
Query: 190 MLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKW 249
LT ++GIG W+ MF+IF+L +PDVLP+ DLG+ + + V Y E + EV W
Sbjct: 231 ELTQIRGIGRWTAEMFLIFNLSRPDVLPLDDLGLIRAISVNYFSGEPVTRSEAREVAANW 290
Query: 250 KPYRSVGSWYMWRLME 265
+P+R+V +WYMWR ++
Sbjct: 291 EPWRTVATWYMWRSLD 306
>gi|116197677|ref|XP_001224650.1| hypothetical protein CHGG_06994 [Chaetomium globosum CBS 148.51]
gi|88178273|gb|EAQ85741.1| hypothetical protein CHGG_06994 [Chaetomium globosum CBS 148.51]
Length = 388
Score = 127 bits (320), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 81/235 (34%), Positives = 116/235 (49%), Gaps = 38/235 (16%)
Query: 69 VDIALRHLRDKDPLLATLIDAHR-----PPTFESSRSPFLSLAKSILYQQLAYKAAKSIY 123
++ A HL D + LIDAH P PF +L SI+ QQ++ AAK+I
Sbjct: 147 LEEACAHLIKVDARMKPLIDAHHCRIFSPEGLAEQIDPFEALCSSIISQQVSGAAAKTIK 206
Query: 124 TRFVALFN--------------------GEDNILPDAVLAVSP-QQLREIGVSYRKASYL 162
RF+ALFN A +A +P + LR G+S RKA Y+
Sbjct: 207 NRFIALFNPTTTTTSTEPAAPTDNNTPTPPPTFPRPADVASTPLETLRTAGLSQRKAEYI 266
Query: 163 RDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLG 222
+ LA ++T G LS + + + + LT+V+G+G WS MF F+L + DV GDLG
Sbjct: 267 QGLATEFTAGTLSAQLLADAPYEEVLARLTAVRGLGQWSAEMFACFALKRLDVFSTGDLG 326
Query: 223 VRKGLQVLYG-----LKELPGA-------LKMEEVCEKWKPYRSVGSWYMWRLME 265
V++G+ G LK G +M EV E+++PYRS+ WYMWR+ E
Sbjct: 327 VQRGMAAFVGRDVAKLKARGGGKWKYMGEKEMVEVAERFRPYRSLFMWYMWRVEE 381
>gi|449546842|gb|EMD37811.1| hypothetical protein CERSUDRAFT_114463 [Ceriporiopsis subvermispora
B]
Length = 449
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 75/179 (41%), Positives = 107/179 (59%), Gaps = 16/179 (8%)
Query: 63 LTFKGEVDIALRHLRDKDPLLATLIDAHRPPTFE--SSRSPFLSLAKSILYQQLAYKAAK 120
LTF E A +HL D + D + FE PF +L SIL QQ++++AA+
Sbjct: 108 LTFSFE--DAKKHLISVDRRFKDIFDRLKCRPFEHLERVDPFRTLTDSILGQQISWRAAR 165
Query: 121 SIYTRFVALFNG------ED----NILPDA--VLAVSPQQLREIGVSYRKASYLRDLAEK 168
SI RF+ LF+ ED + P A V ++ LR G+S RKA Y+ DLA +
Sbjct: 166 SIRHRFIRLFDPSLPEQLEDHQTIDFFPTAQQVASIDSATLRTAGLSGRKAEYVLDLASR 225
Query: 169 YTDGILSDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGL 227
+ DG LS + ++E D+ +++MLT V+GIG W+V MF IFSL +PD+LPVGDLGV++G+
Sbjct: 226 FADGRLSTQKLLEADEEELYRMLTEVRGIGNWTVDMFAIFSLRRPDILPVGDLGVQRGI 284
Score = 41.6 bits (96), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 26/37 (70%), Gaps = 4/37 (10%)
Query: 234 KELPGAL----KMEEVCEKWKPYRSVGSWYMWRLMEA 266
K++ GA+ +MEE+ + W+PYRS+G +YMW L E
Sbjct: 411 KKIKGAILTPKEMEELTQPWRPYRSLGVFYMWALAEG 447
>gi|409730391|ref|ZP_11271964.1| HhH-GPD family protein [Halococcus hamelinensis 100A6]
gi|448724637|ref|ZP_21707143.1| HhH-GPD family protein [Halococcus hamelinensis 100A6]
gi|445785465|gb|EMA36256.1| HhH-GPD family protein [Halococcus hamelinensis 100A6]
Length = 187
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 65/188 (34%), Positives = 109/188 (57%), Gaps = 6/188 (3%)
Query: 79 KDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNILP 138
+DP++A L++ + P + + S F L SI+ Q ++ +A ++ R ALF+G + P
Sbjct: 6 QDPVMAELVEEYGPLELDPAESEFERLVISIVNQSISTASANAVRERTFALFDG---VTP 62
Query: 139 DAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIG 198
+AVLA + L E G+ K Y+R+ AE + + L+ + + D + L + GIG
Sbjct: 63 EAVLAADEETLVEAGLGKAKTEYIRNAAEAFIERDLTRAGLADATDQEVIDELAEIHGIG 122
Query: 199 AWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSW 258
W+ M++IF+L + DV PVGDL VR+ ++ LYG E+ A +M E E+W+P RS+ +
Sbjct: 123 EWTGRMYLIFALGREDVFPVGDLAVRRAVESLYG--EMSRA-EMREFAERWEPSRSLATL 179
Query: 259 YMWRLMEA 266
Y+W E+
Sbjct: 180 YLWEHYES 187
>gi|46137149|ref|XP_390266.1| hypothetical protein FG10090.1 [Gibberella zeae PH-1]
Length = 358
Score = 127 bits (319), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 79/214 (36%), Positives = 112/214 (52%), Gaps = 20/214 (9%)
Query: 72 ALRHLRDKDPLLATLIDAHR-----PPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRF 126
A +L D + LI+ H P PF SL+ SI+ QQ++ AAKSI +F
Sbjct: 137 ACDYLIKVDARMKPLIENHHCRAFSPEGLAEEIDPFESLSSSIIGQQVSGAAAKSIKGKF 196
Query: 127 VALFN---GEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMD 183
+ LF G P V S ++LR G+S RKA Y++ LAEK+ G LS + + +
Sbjct: 197 LTLFELQPGSRFPHPSQVAIKSIEELRTAGLSQRKAEYIKGLAEKFDSGELSTQMLHDAS 256
Query: 184 DVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYG-----LKELPG 238
D + + L +V+G+G WSV MF F+L + DV +GDLGV++G+ G LK G
Sbjct: 257 DEEVMEKLIAVRGLGKWSVEMFACFALKRMDVFSLGDLGVQRGMAAFVGRDVAKLKAKGG 316
Query: 239 A-------LKMEEVCEKWKPYRSVGSWYMWRLME 265
M E+ K+ PYRS+ WYMWR+ E
Sbjct: 317 GKWKYMSEQDMIELSNKFSPYRSLFMWYMWRVEE 350
>gi|239816064|ref|YP_002944974.1| HhH-GPD family protein [Variovorax paradoxus S110]
gi|239802641|gb|ACS19708.1| HhH-GPD family protein [Variovorax paradoxus S110]
Length = 217
Score = 127 bits (319), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 69/194 (35%), Positives = 107/194 (55%), Gaps = 3/194 (1%)
Query: 72 ALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFN 131
A +HL KD ++ LI ES F +LA+SI+ QQ++ KAA++++ +FV L
Sbjct: 21 ACKHLSRKDRVMKRLIPKFGDACLESRGDAFTTLARSIVGQQISVKAAQTVWDKFVVL-- 78
Query: 132 GEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKML 191
+ P VL + +R G+S RK YL DLA + G + ++ +M D + L
Sbjct: 79 -PRKLTPANVLKLKVDDMRAAGLSARKIEYLVDLAIHFDSGAVHVDAWKDMADELIIDEL 137
Query: 192 TSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKP 251
+++GIG W+ MF+IF L +P+VLPV DLG+ G+ V Y + +V W P
Sbjct: 138 VAIRGIGRWTAEMFLIFHLMRPNVLPVDDLGLLNGISVNYFSGDPVSRSDARDVAVAWAP 197
Query: 252 YRSVGSWYMWRLME 265
Y SV +WY+WR ++
Sbjct: 198 YCSVATWYIWRSLD 211
>gi|424796150|ref|ZP_18221919.1| DNA-3-methyladenine glycosylase, probable [Xanthomonas translucens
pv. graminis ART-Xtg29]
gi|422795099|gb|EKU23850.1| DNA-3-methyladenine glycosylase, probable [Xanthomonas translucens
pv. graminis ART-Xtg29]
Length = 224
Score = 127 bits (319), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 70/174 (40%), Positives = 102/174 (58%), Gaps = 2/174 (1%)
Query: 93 PTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNILPDAVLAVSPQQLREI 152
P + P +LA++IL+QQL+ KAA +I R V + G + D + + LR
Sbjct: 38 PGWARPFDPVDALARAILFQQLSGKAAATIVGR-VEVAIGSARLHADTLARIDDPGLRAC 96
Query: 153 GVSYRKASYLRDLAEKYTDG-ILSDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLH 211
GVS KA LRDLA + G I S + MDD + + L V+GIG W+V M ++F L
Sbjct: 97 GVSANKALALRDLARREAAGEIPSLRKLAFMDDEAIVQALLPVRGIGRWTVEMMLLFRLG 156
Query: 212 KPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSWYMWRLME 265
+PD+LPV DLGVRKG Q + L+++P + E E+W PYRS S+Y+W++ +
Sbjct: 157 RPDLLPVDDLGVRKGAQRVDQLQQMPAPQSLAERGERWGPYRSYASFYLWKIAD 210
>gi|398334784|ref|ZP_10519489.1| DNA-3-methyladenine glycosylase II [Leptospira kmetyi serovar
Malaysia str. Bejo-Iso9]
Length = 235
Score = 127 bits (319), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 67/198 (33%), Positives = 114/198 (57%), Gaps = 5/198 (2%)
Query: 68 EVDIALRH----LRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIY 123
E DI L+ LR KDP+ LID P ++ SP+ L KS+L QQL+ K A +
Sbjct: 29 ERDILLKKATDWLRKKDPITKRLIDGVGPCKLQTIGSPYQVLIKSVLGQQLSTKVALTFE 88
Query: 124 TRFVALFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMD 183
R +AL G P+ +L + ++REIGVS K ++ +AE Y D ++D + +++
Sbjct: 89 RRLIALAGGRKIPSPEQILEIPNSKMREIGVSQAKTETIKRVAEAYNDRAITDSKLRKLE 148
Query: 184 DVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKME 243
D+ + ++L S+KG+G W+ M +IF+L + D + DL +RK ++ YG+ + ++
Sbjct: 149 DLNVLELLCSLKGVGPWTAEMVLIFALDRWDHFSINDLILRKSVEKHYGISK-DNKKEII 207
Query: 244 EVCEKWKPYRSVGSWYMW 261
+ + + PYR++ SWY+W
Sbjct: 208 QFLKNYSPYRTILSWYLW 225
>gi|424903637|ref|ZP_18327150.1| DNA-3-methyladenine glycosylase [Burkholderia thailandensis MSMB43]
gi|390931510|gb|EIP88911.1| DNA-3-methyladenine glycosylase [Burkholderia thailandensis MSMB43]
Length = 283
Score = 127 bits (319), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 66/196 (33%), Positives = 108/196 (55%), Gaps = 3/196 (1%)
Query: 70 DIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVAL 129
D A L +D +L LI P F++LA+S++ QQ++ AA+S++ V +
Sbjct: 85 DKACADLVKRDRILKKLIPKFGPAHLVKRGDSFVTLARSVVGQQISVAAAQSVW---VKI 141
Query: 130 FNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFK 189
+ P ++ + ++L G+S RK+ Y+ DLA + G L + MDD +
Sbjct: 142 ETACPKLAPPQIIKLGQEKLIACGLSKRKSEYILDLARHFVSGALHVDKWATMDDEGVIA 201
Query: 190 MLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKW 249
LT ++GIG W+ MF+IF+L +PDVLP+ DLG+ + + V Y E + EV W
Sbjct: 202 ELTQIRGIGRWTAEMFLIFNLSRPDVLPLDDLGLIRAISVNYFSGEPVTRSEAREVAANW 261
Query: 250 KPYRSVGSWYMWRLME 265
+P+R+V +WYMWR ++
Sbjct: 262 EPWRTVATWYMWRSLD 277
>gi|392593695|gb|EIW83020.1| DNA glycosylase [Coniophora puteana RWD-64-598 SS2]
Length = 446
Score = 127 bits (319), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 85/241 (35%), Positives = 129/241 (53%), Gaps = 24/241 (9%)
Query: 5 NHTSDNIS-QNPSASSKITFPPRKIRKLTTITPITKIAEIPVATAISTNSDNSPKIFKPL 63
N+ SD+ S + P ++K ++ K P ++ A P+ + + D S + F P
Sbjct: 50 NNVSDSTSRKKPRVNNK-----KQPAKDAEAPPASETALTPILKHVKSTGDTS-QTFVPA 103
Query: 64 TFKGEVDIALRHLRDKDPLLATLIDAHRPPTFESSRS--PFLSLAKSILYQQLAYKAAKS 121
A RHL D + + FE+ PF +L +SIL QQ+++ AA+S
Sbjct: 104 ELTFSFKDAKRHLVSVDGRFEDIFAKLQCKPFENLERVHPFRALTQSILGQQISWLAARS 163
Query: 122 IYTRFVALFNGEDNILPDAVLAVS-------PQQ--------LREIGVSYRKASYLRDLA 166
I +FV LF+ + +PD + S P Q L+ G+S RKA Y++DLA
Sbjct: 164 INYKFVRLFDSSLSEIPDYSIIKSSTSFFPTPAQVAAQDIATLKTAGLSTRKAEYVQDLA 223
Query: 167 EKYTDGILSDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKG 226
++ DG LS E ++E DD + +ML V+GIG W+V MF IFSL +P++LPVGDLGV++G
Sbjct: 224 ARFADGRLSTERLLEADDEELAEMLIEVRGIGRWTVDMFAIFSLRRPNILPVGDLGVQRG 283
Query: 227 L 227
L
Sbjct: 284 L 284
Score = 45.4 bits (106), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 33/54 (61%), Gaps = 2/54 (3%)
Query: 213 PDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSWYMWRLMEA 266
P+ L V L R + + G PG +ME++ EKW+PYRS+G ++MW L +A
Sbjct: 390 PEGLTVASLKGRLTGKKVKGALLTPG--EMEQLTEKWEPYRSLGVYFMWALQDA 441
>gi|167837112|ref|ZP_02463995.1| DNA-3-methyladenine glycosylase [Burkholderia thailandensis MSMB43]
Length = 262
Score = 127 bits (319), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 66/196 (33%), Positives = 108/196 (55%), Gaps = 3/196 (1%)
Query: 70 DIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVAL 129
D A L +D +L LI P F++LA+S++ QQ++ AA+S++ V +
Sbjct: 64 DKACADLVKRDRILKKLIPKFGPAHLVKRGDSFVTLARSVVGQQISVAAAQSVW---VKI 120
Query: 130 FNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFK 189
+ P ++ + ++L G+S RK+ Y+ DLA + G L + MDD +
Sbjct: 121 ETACPKLAPPQIIKLGQEKLIACGLSKRKSEYILDLARHFVSGALHVDKWATMDDEGVIA 180
Query: 190 MLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKW 249
LT ++GIG W+ MF+IF+L +PDVLP+ DLG+ + + V Y E + EV W
Sbjct: 181 ELTQIRGIGRWTAEMFLIFNLSRPDVLPLDDLGLIRAISVNYFSGEPVTRSEAREVAANW 240
Query: 250 KPYRSVGSWYMWRLME 265
+P+R+V +WYMWR ++
Sbjct: 241 EPWRTVATWYMWRSLD 256
>gi|398389438|ref|XP_003848180.1| hypothetical protein MYCGRDRAFT_15641, partial [Zymoseptoria
tritici IPO323]
gi|339468054|gb|EGP83156.1| hypothetical protein MYCGRDRAFT_15641 [Zymoseptoria tritici IPO323]
Length = 285
Score = 127 bits (318), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 84/238 (35%), Positives = 119/238 (50%), Gaps = 34/238 (14%)
Query: 63 LTFKGEVDIALRHLRDKDPLLATLIDAHRPPTFESSR-----SPFLSLAKSILYQQLAYK 117
LT K + A HL P LA LI++H F + P+ SL SI+ QQ++
Sbjct: 42 LTNKSLLPTAYAHLISVAPNLAPLIESHPCTPFSAEGLAEPVDPWQSLVSSIIGQQVSGA 101
Query: 118 AAKSIYTRFVALFN-GEDNILPDAVLAVSPQQ---------------LREIGVSYRKASY 161
AA SI +FVALFN ED + A A P+ LR G+S RKA Y
Sbjct: 102 AASSIKRKFVALFNTAEDENIDTAAAASKPKSTFPTPAQVVSKDLPTLRTAGLSQRKAEY 161
Query: 162 LRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDL 221
+ LA + D L+ ++ D + L +++G+G WSV MFM+FSL + DV GDL
Sbjct: 162 ISGLAAAFLDKSLTPSLLLNGTDQEVHDALIAIRGLGPWSVEMFMLFSLKRTDVFSTGDL 221
Query: 222 GVRKGLQVL-----YGLKELPGALK--------MEEVCEKWKPYRSVGSWYMWRLMEA 266
GV++G+ GLK G K M E+ E+++P+RS+ WYMWR+ +
Sbjct: 222 GVQRGMAGFVGKWKVGLKAKEGGGKWKYMKEQEMLEIGERFRPFRSIFMWYMWRIGDG 279
>gi|402566137|ref|YP_006615482.1| HhH-GPD family protein [Burkholderia cepacia GG4]
gi|402247334|gb|AFQ47788.1| HhH-GPD family protein [Burkholderia cepacia GG4]
Length = 287
Score = 127 bits (318), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 116/217 (53%), Gaps = 7/217 (3%)
Query: 50 STNSDNSPKIFKPLTFKGEVDIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSI 109
S +D + + +P + D A L +D ++ LI P PF++LA+S+
Sbjct: 73 SDGADGAGGVVRPAYW----DKACADLVKRDRIMKKLIPKFGPAHLVKRGDPFVTLARSV 128
Query: 110 LYQQLAYKAAKSIYTRFVALFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKY 169
+ QQ++ +A++++ R + + + P V+ + +L G+S RK Y+ DLA+ +
Sbjct: 129 VGQQISVPSAQALWAR---IEDACPKLAPQPVIRLGADKLIACGLSKRKTEYILDLAQHF 185
Query: 170 TDGILSDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQV 229
G L + MDD + LT ++GI W+ MF+IF+L +PDVLP+ D G+ + + V
Sbjct: 186 VSGALHVDKWTSMDDEDVIAELTQIRGISRWTAEMFLIFNLSRPDVLPLDDPGLIRAISV 245
Query: 230 LYGLKELPGALKMEEVCEKWKPYRSVGSWYMWRLMEA 266
Y E + EV W+P+R+V +WYMWR ++A
Sbjct: 246 NYFSGEPVTRSEAREVAANWEPWRTVATWYMWRSLDA 282
>gi|284164213|ref|YP_003402492.1| HhH-GPD family protein [Haloterrigena turkmenica DSM 5511]
gi|284013868|gb|ADB59819.1| HhH-GPD family protein [Haloterrigena turkmenica DSM 5511]
Length = 196
Score = 127 bits (318), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 62/188 (32%), Positives = 104/188 (55%), Gaps = 3/188 (1%)
Query: 80 DPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNILPD 139
DP++A LI+ H P E F L SI+ QQL+ +A ++ R L D + P+
Sbjct: 12 DPVMAELIERH-DPYVEPDWDEFERLCISIINQQLSTASATAVRERVFELLR--DEVTPE 68
Query: 140 AVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIGA 199
VL + LR G+S K Y+R+ A + + + + + + + +LT +KG+G
Sbjct: 69 TVLEAEDEALRAAGLSESKIEYMRNAARAFQENDYTRAGLADYSNDEVVDLLTEIKGVGE 128
Query: 200 WSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSWY 259
W+ M+++F L + DVLP+GDL +R+ ++ LYG +M E+ E+W+PYRSV + Y
Sbjct: 129 WTARMYLLFVLEREDVLPLGDLAIRRAIEDLYGDGAELSRAEMREIAERWRPYRSVATRY 188
Query: 260 MWRLMEAK 267
+W E++
Sbjct: 189 LWAEYESE 196
>gi|145589044|ref|YP_001155641.1| HhH-GPD family protein [Polynucleobacter necessarius subsp.
asymbioticus QLW-P1DMWA-1]
gi|145047450|gb|ABP34077.1| HhH-GPD family protein [Polynucleobacter necessarius subsp.
asymbioticus QLW-P1DMWA-1]
Length = 218
Score = 127 bits (318), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 63/191 (32%), Positives = 110/191 (57%), Gaps = 2/191 (1%)
Query: 72 ALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFN 131
A L D +L LI + + F +LA++I+ QQ++ AA++++ R L
Sbjct: 21 ACGELMKHDRILKKLIPKYGSGFLVTRGDAFTTLARAIVGQQISVAAAQAVWDR--VLTA 78
Query: 132 GEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKML 191
+ + P +L ++ ++LR G+S RK Y+RDLA+ + G L +MDD ++ K L
Sbjct: 79 SKKKVNPKNILELTVEELRAAGLSGRKVEYIRDLADHFASGRLHASQWKDMDDESVIKEL 138
Query: 192 TSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKP 251
+S++G+G W+ MF+IF++ +P++LP+ D+G+ K + + Y E + EV W P
Sbjct: 139 SSIRGVGRWTAEMFLIFNMVRPNILPLDDVGLIKAISLNYFSGEPVSRHEAREVAANWAP 198
Query: 252 YRSVGSWYMWR 262
+R+V +WYMWR
Sbjct: 199 WRTVATWYMWR 209
>gi|167586802|ref|ZP_02379190.1| HhH-GPD family protein [Burkholderia ubonensis Bu]
Length = 275
Score = 127 bits (318), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 64/197 (32%), Positives = 107/197 (54%), Gaps = 3/197 (1%)
Query: 70 DIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVAL 129
D A L +D ++ LI P PF++LA+S++ QQ++ +A+S++ A
Sbjct: 77 DKACADLVKRDRIMKKLIPKFGPAHLVKRGDPFVTLARSVVGQQISVASAQSVWASIEA- 135
Query: 130 FNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFK 189
+ P V+ + P +L G+S RK Y+ D+A+ + G L + MDD +
Sbjct: 136 --ASPKLAPQQVIKLGPDKLIACGLSKRKTEYILDVAQHFVSGALHVDKWTSMDDEDVIA 193
Query: 190 MLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKW 249
LT ++GI W+ MF+IF+L +PDVLP+ D G+ + + V Y E + EV W
Sbjct: 194 ELTQIRGISRWTAEMFLIFNLSRPDVLPLDDPGLIRAISVNYFSGEPVTRSEAREVAANW 253
Query: 250 KPYRSVGSWYMWRLMEA 266
+P+R+V +WYMWR +++
Sbjct: 254 EPWRTVATWYMWRSLDS 270
>gi|448414239|ref|ZP_21577378.1| DNA-3-methyladenine glycosylase ii [Halosarcina pallida JCM 14848]
gi|445682532|gb|ELZ34949.1| DNA-3-methyladenine glycosylase ii [Halosarcina pallida JCM 14848]
Length = 187
Score = 127 bits (318), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 64/184 (34%), Positives = 104/184 (56%), Gaps = 5/184 (2%)
Query: 79 KDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNILP 138
D LA L++ H E ++ F SI+ QQL+ ++A +I R F + P
Sbjct: 6 NDDRLAELVEEHGELAVEPAQDEFERFVVSIVNQQLSTQSAAAIRDRLFERFE----VTP 61
Query: 139 DAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIG 198
+A+LA LR++G+S +K SY+R +A + L+ E + + D + + LT ++G+G
Sbjct: 62 EAMLAAEEDALRDVGLSSQKISYVRSVATAFRKEDLTREGLAHLTDEEVVERLTEIRGVG 121
Query: 199 AWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSW 258
W+ M+++F L + DV PV DLG+RK + LYG+ E A M E E W+P+R++ S
Sbjct: 122 DWTAKMYLMFVLGREDVFPVEDLGIRKAMAELYGIDEDDRA-AMVERAETWRPHRTLASR 180
Query: 259 YMWR 262
Y+WR
Sbjct: 181 YLWR 184
>gi|344172263|emb|CCA84895.1| na-3-methyladenine glycosylase protein [Ralstonia syzygii R24]
Length = 212
Score = 127 bits (318), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 60/168 (35%), Positives = 100/168 (59%), Gaps = 3/168 (1%)
Query: 98 SRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNILPDAVLAVSPQQLREIGVSYR 157
+R+P+ +L ++I YQQL +A +I R +AL+ G D P +L LR G S
Sbjct: 43 ARAPYEALVRAIAYQQLHARAGDAILGRLLALYPGVDFPSPGQLLDTGEATLRGCGFSAT 102
Query: 158 KASYLRDLAEKYTDGIL--SDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDV 215
K + +R LA+ DG++ DE++ M D + + L +++G+G W+V M +I++L + D+
Sbjct: 103 KLATIRGLAQATLDGVVPTRDEALA-MPDEALVERLVTLRGVGRWTVEMLLIYTLERADI 161
Query: 216 LPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSWYMWRL 263
LP D GVR+G + L L+ P +M E+ W PYR++ +WY+WR+
Sbjct: 162 LPADDFGVREGYRRLKRLESAPARKQMIEIGRAWSPYRTIAAWYLWRM 209
>gi|291296708|ref|YP_003508106.1| HhH-GPD family protein [Meiothermus ruber DSM 1279]
gi|290471667|gb|ADD29086.1| HhH-GPD family protein [Meiothermus ruber DSM 1279]
Length = 195
Score = 127 bits (318), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 70/167 (41%), Positives = 103/167 (61%), Gaps = 9/167 (5%)
Query: 99 RSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNILPDAVLAVSPQQLREIGVSYRK 158
R+P+ L SI+ QQL+ KAA +I+ R + F E +L A L + LR +G+S K
Sbjct: 38 RAPYEVLLSSIVGQQLSGKAADTIWRRLSSRFALEPEVLYRAAL----EDLRAVGLSSAK 93
Query: 159 ASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPV 218
A Y++DL+ +G L + + D + LT VKGIG W+V MF++F L +PDV PV
Sbjct: 94 ARYVQDLSRFALEGGL--QGLEHHSDEALIAHLTQVKGIGVWTVQMFLMFGLGRPDVWPV 151
Query: 219 GDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSWYMWRLME 265
DLG+RKG Q LYG+ E ++E + E+++PYRS +WY+WR +E
Sbjct: 152 LDLGIRKGAQKLYGVIERD---ELEALGERFRPYRSHAAWYLWRALE 195
>gi|440729868|ref|ZP_20909977.1| DNA-3-methyladenine glycosylase [Xanthomonas translucens DAR61454]
gi|440380067|gb|ELQ16639.1| DNA-3-methyladenine glycosylase [Xanthomonas translucens DAR61454]
Length = 224
Score = 127 bits (318), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 70/174 (40%), Positives = 101/174 (58%), Gaps = 2/174 (1%)
Query: 93 PTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNILPDAVLAVSPQQLREI 152
P + P +LA++IL+QQL+ KAA +I R A G + D + + LR
Sbjct: 38 PGWARPFDPVDALARAILFQQLSGKAAATIVGRVEAAI-GSIRLHADTLARIDDPGLRAC 96
Query: 153 GVSYRKASYLRDLAEKYTDG-ILSDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLH 211
GVS KA LRDLA + G I S + MDD + + L V+GIG W+V M ++F L
Sbjct: 97 GVSANKALALRDLARREAAGEIPSLRKLAFMDDEAIVQALLPVRGIGRWTVEMMLLFRLG 156
Query: 212 KPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSWYMWRLME 265
+PD+LPV DLGVRKG Q + L+++P + E E+W PYRS S+Y+W++ +
Sbjct: 157 RPDLLPVDDLGVRKGAQRVDQLQQMPAPQSLAEHGERWGPYRSYASFYLWKIAD 210
>gi|89900144|ref|YP_522615.1| HhH-GPD [Rhodoferax ferrireducens T118]
gi|89344881|gb|ABD69084.1| HhH-GPD [Rhodoferax ferrireducens T118]
Length = 216
Score = 126 bits (317), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 66/194 (34%), Positives = 106/194 (54%), Gaps = 3/194 (1%)
Query: 72 ALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFN 131
A +HL KD ++ LI ++ F++LA+S++ QQ++ KAA++++ RF L
Sbjct: 20 ACKHLMKKDRVMKRLIPQFGDACLQTRGDAFVTLARSVVGQQISVKAAQTVWNRFALL-- 77
Query: 132 GEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKML 191
I VL + +R G+S RK YL DLA + G + E+ MDD + L
Sbjct: 78 -PKKITAANVLKLKVDDMRAAGLSVRKVEYLVDLALHFDSGTVHVETWETMDDEAIIAEL 136
Query: 192 TSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKP 251
+++GIG W+ MF+IF L +P+VLP+ D+G+ G+ Y ++ EV W P
Sbjct: 137 IAIRGIGRWTAEMFLIFHLMRPNVLPLDDVGLINGISKNYFSGDVVSRSDAREVAAAWAP 196
Query: 252 YRSVGSWYMWRLME 265
Y SV +WY+WR ++
Sbjct: 197 YCSVATWYIWRSLD 210
>gi|399010095|ref|ZP_10712473.1| HhH-GPD superfamily base excision DNA repair protein [Pseudomonas
sp. GM17]
gi|398107845|gb|EJL97836.1| HhH-GPD superfamily base excision DNA repair protein [Pseudomonas
sp. GM17]
Length = 204
Score = 126 bits (317), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 67/187 (35%), Positives = 110/187 (58%), Gaps = 4/187 (2%)
Query: 80 DPLLATLIDAHRPPTFES--SRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNIL 137
DP A ++A P ++ +R P +L ++I YQQL +A +I RF+ L+ G+
Sbjct: 16 DPDWARHVEAVGPCLHQAKPAREPCEALVRAIAYQQLHARAGDAILGRFLGLY-GQTFPS 74
Query: 138 PDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESI-VEMDDVTMFKMLTSVKG 196
P+ +LA + LR G S K + +R +AE G++ D + + MDD + LT ++G
Sbjct: 75 PEQILATDFEALRACGFSAGKIATIRGIAEATLSGVVPDYQVALAMDDEALIARLTRLRG 134
Query: 197 IGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVG 256
IG W+V M +I+SL + D+LP D GVR+G + L GL++ P +M E+ +P+R+V
Sbjct: 135 IGRWTVEMLLIYSLERLDILPADDFGVREGYRRLKGLEQQPTRRQMIEIGLSLRPHRTVA 194
Query: 257 SWYMWRL 263
+WY+WR+
Sbjct: 195 AWYLWRV 201
>gi|76802719|ref|YP_330814.1| DNA N-glycosylase / DNA lyase [Natronomonas pharaonis DSM 2160]
gi|76558584|emb|CAI50176.1| DNA N-glycosylase [Natronomonas pharaonis DSM 2160]
Length = 203
Score = 126 bits (317), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 72/186 (38%), Positives = 104/186 (55%), Gaps = 6/186 (3%)
Query: 80 DPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNILPD 139
DP+L LI+ H T E + F L S+L QQ++ +A++ R LF+ + P
Sbjct: 11 DPVLEPLIERHGALTIEPADDLFRRLLVSVLRQQVSMASAEATKKR---LFDAVEPT-PT 66
Query: 140 AVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIGA 199
AVLA + RE G+S +KA+YL ++A + D MDD + LT + G+G
Sbjct: 67 AVLAADTETFREAGLSRQKATYLHNIAAAFEDHGYDRAYFEPMDDEAVRAELTDITGVGE 126
Query: 200 WSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSWY 259
W+ +M ++FSL + DV PVGDLG+RKG++ L L E M E E+W PYRS S Y
Sbjct: 127 WTANMQLLFSLGREDVFPVGDLGIRKGMRAL--LDEDLDRAAMTEAAERWAPYRSYASLY 184
Query: 260 MWRLME 265
+WR+ E
Sbjct: 185 LWRVNE 190
>gi|448726329|ref|ZP_21708737.1| HhH-GPD family protein [Halococcus morrhuae DSM 1307]
gi|445795407|gb|EMA45934.1| HhH-GPD family protein [Halococcus morrhuae DSM 1307]
Length = 215
Score = 126 bits (317), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 103/188 (54%), Gaps = 3/188 (1%)
Query: 79 KDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNILP 138
+DP+L LI+ +++ PF L SI+ Q ++ +A ++ R F D + P
Sbjct: 31 EDPVLRALIEEFGEIEIDTAEEPFERLVVSIVNQSISTASANAVRERVFERF---DEVTP 87
Query: 139 DAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIG 198
VLA +L + G+ K Y+R+ A + + L E + + D + L ++GIG
Sbjct: 88 ATVLAADADELSDAGLGETKTEYVRNAARAFRERDLGREGLADASDEEVIDELGEIRGIG 147
Query: 199 AWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSW 258
W+ M++IF+L + DVLP+GDL VR+G++ LYG +M E+ E+W+PYRS+ +
Sbjct: 148 EWTARMYLIFALGREDVLPLGDLAVRRGIESLYGDGGDLTRGEMREIAERWRPYRSLATL 207
Query: 259 YMWRLMEA 266
Y+W E+
Sbjct: 208 YIWHHYES 215
>gi|319794159|ref|YP_004155799.1| hhh-gpd family protein [Variovorax paradoxus EPS]
gi|315596622|gb|ADU37688.1| HhH-GPD family protein [Variovorax paradoxus EPS]
Length = 216
Score = 126 bits (317), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 66/194 (34%), Positives = 108/194 (55%), Gaps = 3/194 (1%)
Query: 72 ALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFN 131
A +HL KD ++ LI ES F +LA+S++ QQ++ KAA++++ +F L
Sbjct: 20 ACKHLAKKDRVMKRLIPKFGTACLESRGDAFTTLARSVVGQQISVKAAQTVWDKFAVL-- 77
Query: 132 GEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKML 191
+ P VL + +R G+S RK YL DLA + G++ ++ +M D + + L
Sbjct: 78 -PRKLTPANVLKLKVDDMRAAGLSARKIEYLVDLALHFDSGVVHVDAWKDMADELIIEEL 136
Query: 192 TSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKP 251
+++GIG W+ MF+IF L +P+VLPV D+G+ G+ V Y + +V W P
Sbjct: 137 VAIRGIGRWTAEMFLIFHLMRPNVLPVDDVGLLNGISVNYFSGDPVSRSDARDVAVAWAP 196
Query: 252 YRSVGSWYMWRLME 265
Y SV +WY+WR ++
Sbjct: 197 YCSVATWYIWRSLD 210
>gi|406894572|gb|EKD39358.1| HhH-GPD family protein [uncultured bacterium]
Length = 200
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 68/202 (33%), Positives = 116/202 (57%), Gaps = 9/202 (4%)
Query: 66 KGEVDIALRHLRDKDPLLATLIDAHRPPT-FESSRSPFLSLAKSILYQQLAYKAAKSIYT 124
K D HL DP+L+ LI T F+ + P+ +L +SI+ QQL+ K A +I
Sbjct: 7 KHSTDTPEEHLSAADPILSQLIVKFGKCTLFQRNYDPYGTLVRSIISQQLSAKVADTIEG 66
Query: 125 RFVALFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDD 184
R +AL + P +L + +LRE G+S K+ Y+ +L+ + DG ++ + + +
Sbjct: 67 RVLALVQ---DFNPANILEIPIDRLREAGLSGAKSRYIHELSSRVIDGRMNFDDLHAKSN 123
Query: 185 VTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEE 244
+L+ + G+G W+ MF+IF L + DVL GD G+++ +++LYG K + E+
Sbjct: 124 DEAIAILSELPGVGRWTAEMFLIFGLGRSDVLAQGDAGLKRAVRLLYGEKAV-----FEK 178
Query: 245 VCEKWKPYRSVGSWYMWRLMEA 266
V +KWKP+RSV SWY+W+ +++
Sbjct: 179 VGKKWKPFRSVASWYLWKYLDS 200
>gi|115352163|ref|YP_774002.1| HhH-GPD family protein [Burkholderia ambifaria AMMD]
gi|115282151|gb|ABI87668.1| HhH-GPD family protein [Burkholderia ambifaria AMMD]
Length = 287
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 115/214 (53%), Gaps = 7/214 (3%)
Query: 53 SDNSPKIFKPLTFKGEVDIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQ 112
+D + + +P + D A L +D +L LI P PF++LA+S++ Q
Sbjct: 77 ADGADGVVRPAYW----DKACADLVKRDRILKKLIPKFGPAHLVKRGDPFVTLARSVVGQ 132
Query: 113 QLAYKAAKSIYTRFVALFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDG 172
Q++ +A++++ R + + + P V+ + +L G+S RK Y+ DLA+ + G
Sbjct: 133 QISVPSAQALWAR---IEDACPKLAPQPVIRLGADKLIACGLSKRKTEYILDLAQHFVSG 189
Query: 173 ILSDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYG 232
L + MDD + LT ++GI W+ MF+IF+L +PDVLP+ D G+ + + V Y
Sbjct: 190 ALHVDKWTSMDDEDVIAELTQIRGISRWTAEMFLIFNLSRPDVLPLDDPGLIRAISVNYF 249
Query: 233 LKELPGALKMEEVCEKWKPYRSVGSWYMWRLMEA 266
E + EV W+P+R+V +WYMWR ++A
Sbjct: 250 SGEPVTRSEAREVAANWEPWRTVATWYMWRSLDA 283
>gi|161524377|ref|YP_001579389.1| HhH-GPD family protein [Burkholderia multivorans ATCC 17616]
gi|189350868|ref|YP_001946496.1| DNA-3-methyladenine glycosylase II [Burkholderia multivorans ATCC
17616]
gi|421476548|ref|ZP_15924425.1| base excision DNA repair protein, HhH-GPD family [Burkholderia
multivorans CF2]
gi|160341806|gb|ABX14892.1| HhH-GPD family protein [Burkholderia multivorans ATCC 17616]
gi|189334890|dbj|BAG43960.1| DNA-3-methyladenine glycosylase II [Burkholderia multivorans ATCC
17616]
gi|400228084|gb|EJO58041.1| base excision DNA repair protein, HhH-GPD family [Burkholderia
multivorans CF2]
Length = 293
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 66/197 (33%), Positives = 107/197 (54%), Gaps = 3/197 (1%)
Query: 70 DIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVAL 129
D A L +D +L LI P PF++LA+S++ QQ++ +A+S++ R A
Sbjct: 95 DKACADLVKRDRILKKLIPKFGPAHLVKRGDPFVTLARSVVGQQISVPSAQSLWARIQAA 154
Query: 130 FNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFK 189
+ P V+ + +L G+S RK Y+ DLA+ + G L + M+D +
Sbjct: 155 C---PKLAPQPVIRLGADKLIACGLSKRKTEYILDLAQHFVSGALHVDKWTSMEDEAVIA 211
Query: 190 MLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKW 249
LT ++GI W+ MF+IF+L +PDVLP+ D G+ + + V Y E + EV W
Sbjct: 212 ELTQIRGISRWTAEMFLIFNLSRPDVLPLDDPGLIRAISVNYFSGEPVTRSEAREVAANW 271
Query: 250 KPYRSVGSWYMWRLMEA 266
+P+R+V +WYMWR ++A
Sbjct: 272 EPWRTVATWYMWRSLDA 288
>gi|251790833|ref|YP_003005554.1| DNA-3-methyladenine glycosylase II [Dickeya zeae Ech1591]
gi|247539454|gb|ACT08075.1| DNA-3-methyladenine glycosylase II [Dickeya zeae Ech1591]
Length = 224
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 70/197 (35%), Positives = 113/197 (57%), Gaps = 5/197 (2%)
Query: 72 ALRHLRDKDPLLATLIDAHRPPTFES--SRSPFLSLAKSILYQQLAYKAAKSIYTRFVAL 129
AL HL D A LID FES +R P+ +L +++ QQL+ +AA +I ++
Sbjct: 13 ALAHLSAIDAHWARLIDGVGHLRFESRPAREPYEALIRAVASQQLSNRAAAAIISKLQQR 72
Query: 130 FNGEDNILPDA--VLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVE-MDDVT 186
F +N P A + LR+ G S RK ++ +A+ G++ D + E +DD T
Sbjct: 73 FAVGENGFPAAEQLATCEAAILRQCGFSARKIDTVQGIAQGVLSGLVPDRTAAEHLDDET 132
Query: 187 MFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVC 246
+ + L S+KGIG W+V M +I +L + D++PV DLG+++G + LY L + P M E+
Sbjct: 133 LIERLCSLKGIGRWTVEMLLISTLERMDIMPVDDLGIKQGFRYLYRLPQDPTRKTMLELS 192
Query: 247 EKWKPYRSVGSWYMWRL 263
E +PYR++ +WY+WR+
Sbjct: 193 EPCRPYRTLAAWYLWRI 209
>gi|253998428|ref|YP_003050491.1| DNA-3-methyladenine glycosylase II [Methylovorus glucosetrophus
SIP3-4]
gi|253985107|gb|ACT49964.1| DNA-3-methyladenine glycosylase II [Methylovorus glucosetrophus
SIP3-4]
Length = 224
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 63/166 (37%), Positives = 97/166 (58%), Gaps = 1/166 (0%)
Query: 98 SRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNILPDAVLAVSPQQLREIGVSYR 157
R P+ +L +++ +QQL AA +I +R +A F + P+ + QLR G+S
Sbjct: 41 QREPYEALVRAVAHQQLHGNAAAAILSRLMASFPHDGFPSPEQLATADETQLRSCGLSMA 100
Query: 158 KASYLRDLAEKYTDGILSDESIV-EMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVL 216
K + +R +A G + SI +M + + LTS+KGIG W+V M +IFSL + DVL
Sbjct: 101 KVNAIRGIAAATLAGTVPSASIAADMSEEELITRLTSLKGIGRWTVEMLLIFSLGRNDVL 160
Query: 217 PVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSWYMWR 262
PV D GVR+G ++L L E P + + E+WKPYRS+ +WY+W+
Sbjct: 161 PVDDFGVREGWRLLKNLPEQPKPKALAVIGEQWKPYRSIAAWYLWQ 206
>gi|221214716|ref|ZP_03587685.1| HhH-GPD family protein [Burkholderia multivorans CGD1]
gi|221165255|gb|EED97732.1| HhH-GPD family protein [Burkholderia multivorans CGD1]
Length = 293
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 66/197 (33%), Positives = 107/197 (54%), Gaps = 3/197 (1%)
Query: 70 DIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVAL 129
D A L +D +L LI P PF++LA+S++ QQ++ +A+S++ R A
Sbjct: 95 DKACADLVKRDRILKKLIPKFGPAHLVKRGDPFVTLARSVVGQQISVPSAQSLWARIQAA 154
Query: 130 FNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFK 189
+ P V+ + +L G+S RK Y+ DLA+ + G L + M+D +
Sbjct: 155 CP---KLAPQPVIRLGADKLIACGLSKRKTEYILDLAQHFVSGALHVDKWTSMEDEAVIA 211
Query: 190 MLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKW 249
LT ++GI W+ MF+IF+L +PDVLP+ D G+ + + V Y E + EV W
Sbjct: 212 ELTQIRGISRWTAEMFLIFNLSRPDVLPLDDPGLIRAISVNYFSGEPVTRSEAREVAANW 271
Query: 250 KPYRSVGSWYMWRLMEA 266
+P+R+V +WYMWR ++A
Sbjct: 272 EPWRTVATWYMWRSLDA 288
>gi|408400242|gb|EKJ79326.1| hypothetical protein FPSE_00466 [Fusarium pseudograminearum CS3096]
Length = 359
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 78/214 (36%), Positives = 112/214 (52%), Gaps = 20/214 (9%)
Query: 72 ALRHLRDKDPLLATLIDAHR-----PPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRF 126
A +L D + LI+ H P PF SL+ SI+ QQ++ AAKSI +F
Sbjct: 138 ACDYLIKVDARMKPLIENHHCRAFSPEGLAEEIDPFESLSSSIIGQQVSGAAAKSIKGKF 197
Query: 127 VALFN---GEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMD 183
+ LF G P V S ++LR G+S RKA Y++ LA+K+ G LS + + +
Sbjct: 198 LTLFELQPGSRFPHPSQVAIKSIEELRTAGLSQRKAEYIKGLADKFGSGELSAQMLHDAS 257
Query: 184 DVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYG-----LKELPG 238
D + + L +V+G+G WSV MF F+L + DV +GDLGV++G+ G LK G
Sbjct: 258 DEEVMEKLIAVRGLGKWSVEMFACFALKRMDVFSLGDLGVQRGMAAFVGRDVAKLKAKGG 317
Query: 239 A-------LKMEEVCEKWKPYRSVGSWYMWRLME 265
M E+ K+ PYRS+ WYMWR+ E
Sbjct: 318 GKWKYMSEQDMIELSNKFSPYRSLFMWYMWRVEE 351
>gi|134296082|ref|YP_001119817.1| HhH-GPD family protein [Burkholderia vietnamiensis G4]
gi|387902614|ref|YP_006332953.1| DNA-3-methyladenine glycosylase II [Burkholderia sp. KJ006]
gi|134139239|gb|ABO54982.1| HhH-GPD family protein [Burkholderia vietnamiensis G4]
gi|387577506|gb|AFJ86222.1| DNA-3-methyladenine glycosylase II [Burkholderia sp. KJ006]
Length = 287
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 72/242 (29%), Positives = 123/242 (50%), Gaps = 8/242 (3%)
Query: 25 PRKIRKLTTITPITKIAEIPVATAISTNSD-NSPKIFKPLTFKGEVDIALRHLRDKDPLL 83
P + + + P T A A + + D S + +P + D A L +D +L
Sbjct: 46 PVRAKGVDPAQPETTSAATDTARKVRASDDAGSADVVRPAYW----DKACADLVKRDRIL 101
Query: 84 ATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNILPDAVLA 143
LI P PF++LA+S++ QQ++ +A++++ R + + + P V+
Sbjct: 102 KKLIPKFGPAHLVKRGEPFVTLARSVVGQQISVPSAQALWAR---IEDACPKLAPQPVIR 158
Query: 144 VSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIGAWSVH 203
+ +L G+S RK Y+ DLA+ + G L + MDD + LT ++GI W+
Sbjct: 159 LGADKLIACGLSKRKTEYILDLAQHFVSGALHVDKWTSMDDEDVIAELTQIRGISRWTAE 218
Query: 204 MFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSWYMWRL 263
MF+IF+L +PDVLP+ D G+ + + V Y E + EV W+P+R+V +WYMWR
Sbjct: 219 MFLIFNLSRPDVLPLDDPGLIRAISVNYFSGEPVTRSEAREVAANWEPWRTVATWYMWRS 278
Query: 264 ME 265
++
Sbjct: 279 LD 280
>gi|299751274|ref|XP_002911617.1| hypothetical protein CC1G_14150 [Coprinopsis cinerea okayama7#130]
gi|298409299|gb|EFI28123.1| hypothetical protein CC1G_14150 [Coprinopsis cinerea okayama7#130]
Length = 388
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 86/247 (34%), Positives = 126/247 (51%), Gaps = 25/247 (10%)
Query: 1 MKKPNHTSDNISQNPSASSKITFPPRKIRKLTTITPITKIAEIPVATAISTNSDNSPKIF 60
+ P ++S+ +N +A+ K P K K T T + SD +
Sbjct: 24 ISSPANSSNGKRKNNNAALKA--PAFKKSKTQTGAGSTTVGSTANPQTTRAPSDTNADAP 81
Query: 61 KPLTFKGEVDIALRHLRDKDPLLATLIDAHRPPTFESSRS--PFLSLAKSILYQQLAYKA 118
P + + A+RHL DP L D FE PF +L+ SIL QQ+++KA
Sbjct: 82 VPAVLSFDFNEAMRHLITVDPRFQDLFDRMPCRPFEQLEQVHPFRALSISILGQQISWKA 141
Query: 119 AKSIYTRFVALFNGEDNILPDAVLAVS----------PQQ--------LREIGVSYRKAS 160
A+SI +F+ L++ +P+ V S P+Q LR G+S RKA
Sbjct: 142 ARSITHKFIRLYSPS---IPEEVTDESRAAAMQVFPTPEQVSKTEVSLLRTAGLSERKAQ 198
Query: 161 YLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGD 220
Y++DLA ++ DG LS + ++ D + +ML VKGIG W+V MF IFSL +PD+LPVGD
Sbjct: 199 YIQDLAARFADGRLSTDKLLNASDEELAEMLIEVKGIGRWTVDMFAIFSLRRPDILPVGD 258
Query: 221 LGVRKGL 227
LGV++GL
Sbjct: 259 LGVQRGL 265
>gi|325108445|ref|YP_004269513.1| HhH-GPD family protein [Planctomyces brasiliensis DSM 5305]
gi|324968713|gb|ADY59491.1| HhH-GPD family protein [Planctomyces brasiliensis DSM 5305]
Length = 228
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 69/196 (35%), Positives = 104/196 (53%), Gaps = 5/196 (2%)
Query: 74 RHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGE 133
R+L +D +L+ +I T + R PF L ++I+ QQ++ AA++I R V +
Sbjct: 18 RYLAKQDSVLSPVIARVGACTLKPIRRPFAMLVRAIISQQISTAAARNIRQR-VQRLSTT 76
Query: 134 DNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTS 193
+ + + + R G+S +K YLRDL + L + M D + LT
Sbjct: 77 GQLSLTGLAGLPDEAFRSAGISPQKLRYLRDLIHRCETNQLPLSRLSRMSDEDVIAALTE 136
Query: 194 VKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKE----LPGALKMEEVCEKW 249
VKGIG W+ HMF+IF L +PDVLP GDLG++K + LY +E L EE + W
Sbjct: 137 VKGIGVWTAHMFLIFCLGRPDVLPTGDLGIQKAVAQLYFPEEADVRLATLAHFEEATQNW 196
Query: 250 KPYRSVGSWYMWRLME 265
+P+ SV SWY WR ++
Sbjct: 197 RPHASVASWYCWRSLD 212
>gi|121706616|ref|XP_001271570.1| DNA-3-methyladenine glycosylase, putative [Aspergillus clavatus
NRRL 1]
gi|119399718|gb|EAW10144.1| DNA-3-methyladenine glycosylase, putative [Aspergillus clavatus
NRRL 1]
Length = 378
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 79/224 (35%), Positives = 112/224 (50%), Gaps = 29/224 (12%)
Query: 69 VDIALRHLRDKDPLLATLIDAHR-----PPTFESSRSPFLSLAKSILYQQLAYKAAKSIY 123
++ AL HL DP L +I H P PF +L SI+ QQ++ AA+SI
Sbjct: 145 LEKALAHLIAADPRLEPVIQQHHCHLFSPEGLAEEIDPFEALVSSIIGQQVSGAAARSIK 204
Query: 124 TRFVALFN-GEDNILPDAVLAV---SPQQ--------LREIGVSYRKASYLRDLAEKYTD 171
+F+ALFN PD +P+ LR G+S RKA Y+ L++K+
Sbjct: 205 NKFLALFNKAPGGSAPDGAFQARFPTPEDIVQCDLVTLRTAGLSQRKAEYIHGLSQKFAA 264
Query: 172 GILSDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLY 231
G LS ++ D + + LT+V+G+G WSV MF F+L + DV GDLGV++G L
Sbjct: 265 GELSARMLLNASDEELVEKLTAVRGLGKWSVEMFACFALKRTDVFSTGDLGVQRGCAALI 324
Query: 232 G-----LKELPGA-------LKMEEVCEKWKPYRSVGSWYMWRL 263
G LK G M ++ K+ PYRS+ WYMWR+
Sbjct: 325 GKDVSKLKAKGGGKFKYMSEKDMLDLAAKFTPYRSLFMWYMWRI 368
>gi|260221172|emb|CBA29471.1| hypothetical protein Csp_A12310 [Curvibacter putative symbiont of
Hydra magnipapillata]
Length = 207
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 67/194 (34%), Positives = 106/194 (54%), Gaps = 3/194 (1%)
Query: 72 ALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFN 131
A +HL KD ++ LI ++ F++LA+SI+ QQ++ KAA++++ RF L
Sbjct: 11 ACKHLMKKDRVMKRLIPQFGDACLQTRGDAFVTLARSIIGQQISVKAAQTVWDRFAVL-- 68
Query: 132 GEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKML 191
+ P VL + +R G+S RK YL DLA + +G L + M+D + L
Sbjct: 69 -PKKLTPANVLKLKVDDMRAAGLSARKVEYLVDLALHFDNGALHVKDWDSMEDEEIIAEL 127
Query: 192 TSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKP 251
S++GIG W+ MF+IF L +P+VLP+ D G+ G+ Y ++ EV W P
Sbjct: 128 VSIRGIGRWTAEMFLIFHLMRPNVLPLDDDGLITGISQNYFSGDVVSRSDAREVAAAWAP 187
Query: 252 YRSVGSWYMWRLME 265
Y SV +WY+WR ++
Sbjct: 188 YCSVATWYIWRSLD 201
>gi|399156757|ref|ZP_10756824.1| DNA-3-methyladenine glycosylase II [SAR324 cluster bacterium SCGC
AAA001-C10]
Length = 207
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 72/189 (38%), Positives = 107/189 (56%), Gaps = 5/189 (2%)
Query: 76 LRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDN 135
LR D +A +I+ P F L+ +I+ QQL+ + AK I TRF LF +N
Sbjct: 11 LRLADSRIAGIIERAGPCELIPHEVGFAGLSSAIIGQQLSNQVAKIIRTRFRKLF---EN 67
Query: 136 ILPDA--VLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTS 193
LPD +L + LR+ G+S++K YLR LA+ G L ++ MDD + L
Sbjct: 68 ELPDHGYLLKLDYPVLRKTGLSFQKIKYLRGLAQWMKSGDLDFLALEGMDDEIAIQQLVQ 127
Query: 194 VKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYR 253
VKGIG W+ M+++FSL++PDVLP+GD + ++ LYGL E + EKW+P+R
Sbjct: 128 VKGIGRWTAEMYLMFSLNRPDVLPLGDAALEVAMKSLYGLPEKDWEKPAITIAEKWRPWR 187
Query: 254 SVGSWYMWR 262
+V WY++R
Sbjct: 188 TVACWYLYR 196
>gi|425899097|ref|ZP_18875688.1| DNA-3-methyladenine glycosylase [Pseudomonas chlororaphis subsp.
aureofaciens 30-84]
gi|397889777|gb|EJL06259.1| DNA-3-methyladenine glycosylase [Pseudomonas chlororaphis subsp.
aureofaciens 30-84]
Length = 204
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 67/187 (35%), Positives = 109/187 (58%), Gaps = 4/187 (2%)
Query: 80 DPLLATLIDAHRPPTFES--SRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNIL 137
DP A ++A P ++ +R P +L ++I YQQL +A +I RF+ L+ G+
Sbjct: 16 DPDWARHVEAVGPCLHQAKPAREPCEALVRAIAYQQLHARAGDAILGRFLGLY-GQTFPS 74
Query: 138 PDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVE-MDDVTMFKMLTSVKG 196
P +LA + LR G S K + +R +AE G++ D + MDD + + LT ++G
Sbjct: 75 PGQILATDFEPLRACGFSAGKIATIRGIAEATLSGVVPDYQTAQTMDDEALIERLTRLRG 134
Query: 197 IGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVG 256
IG W+V M +I+SL + D+LP D GVR+G + L GL++ P +M E+ +P+R+V
Sbjct: 135 IGRWTVEMLLIYSLERLDILPADDFGVREGYRRLKGLEQQPTRKQMIEIGLSLRPHRTVA 194
Query: 257 SWYMWRL 263
+WY+WR+
Sbjct: 195 AWYLWRV 201
>gi|406883303|gb|EKD30922.1| hypothetical protein ACD_77C00448G0005 [uncultured bacterium]
Length = 198
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 68/202 (33%), Positives = 119/202 (58%), Gaps = 8/202 (3%)
Query: 64 TFKGEVDIALRHLRDKDPLLATLIDAHRPPTFESSRSP--FLSLAKSILYQQLAYKAAKS 121
TF D+ + L+ + L +ID R E P F++L SI+ QQ++ KAA++
Sbjct: 3 TFFKYGDLEISFLKSRCSKLGEVID--RMGFLERKIVPDLFVALVSSIVAQQISGKAAET 60
Query: 122 IYTRFVALFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVE 181
++ RF+AL + P+ +LA P +++ G+S++K Y+ +A+ TDG ++ + +
Sbjct: 61 VWKRFIALIV---EVSPENILAADPLLMQKCGMSHKKVGYIIGIAQAATDGTINFKELST 117
Query: 182 MDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALK 241
M+D + L+S++G+G W+ M +IFSL +PDVL GD ++KGL L+GL+ + A +
Sbjct: 118 MNDSEIIGKLSSLRGVGVWTAEMLLIFSLERPDVLSWGDFAIKKGLMKLHGLESISKA-Q 176
Query: 242 MEEVCEKWKPYRSVGSWYMWRL 263
EE + + PY S+ S Y+W +
Sbjct: 177 FEEYRKLYSPYNSIASLYLWEV 198
>gi|420252648|ref|ZP_14755751.1| 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase
[Burkholderia sp. BT03]
gi|398054155|gb|EJL46291.1| 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase
[Burkholderia sp. BT03]
Length = 349
Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 66/196 (33%), Positives = 103/196 (52%), Gaps = 3/196 (1%)
Query: 70 DIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVAL 129
D A L +D +L LI P S PF++LA+S++ QQ++ +A+S++ R VA
Sbjct: 151 DKACADLVKRDRILKKLIPKFGPVHLSSRADPFVTLARSVVGQQISVASAQSMWQRIVAA 210
Query: 130 FNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFK 189
++P ++ + L GVS RKA Y+ DLA + G L M+D +
Sbjct: 211 C---PKLVPQQIIKLGQDDLMNCGVSKRKAEYIFDLAHHFVSGALHVGKWTSMEDEDVIA 267
Query: 190 MLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKW 249
LT ++GI W+ MF+IF L +PDVLP+ D + + Y E + EV W
Sbjct: 268 ELTQIRGISRWTAEMFLIFDLSRPDVLPLDDPNLIHAISQNYFSGEPVTRSEAREVAANW 327
Query: 250 KPYRSVGSWYMWRLME 265
+P+R+V +WYMWR ++
Sbjct: 328 EPWRTVATWYMWRSLD 343
>gi|336472053|gb|EGO60213.1| hypothetical protein NEUTE1DRAFT_127140 [Neurospora tetrasperma
FGSC 2508]
gi|350294742|gb|EGZ75827.1| DNA glycosylase [Neurospora tetrasperma FGSC 2509]
Length = 480
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 82/244 (33%), Positives = 114/244 (46%), Gaps = 47/244 (19%)
Query: 69 VDIALRHLRDKDPLLATLIDAH-----RPPTFESSRSPFLSLAKSILYQQLAYKAAKSIY 123
++ A HL DP + LID H P PF SL SI+ QQ++ AAKSI
Sbjct: 230 LEKACAHLIAIDPRMKPLIDKHPCRVFSPEGLAEQIDPFESLVSSIISQQVSGAAAKSIK 289
Query: 124 TRFVALFNGEDN-------------------------ILPDAVLAVSPQQLREIGVSYRK 158
+FVALF ED+ P VLA LR G+S RK
Sbjct: 290 AKFVALFEEEDDPPSDQKEDKEKKTQENDPTPTKRRFPTPAHVLAKDLPTLRTAGLSQRK 349
Query: 159 ASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPV 218
A Y+ LA K+ G LS + + L +V+G+G W+V MF F+L + DV +
Sbjct: 350 AEYIHGLAAKFASGELSASLLASAPYEELVAKLVAVRGLGLWTVEMFACFALKRMDVFSL 409
Query: 219 GDLGVRKGLQVLYG--LKELPGA---------------LKMEEVCEKWKPYRSVGSWYMW 261
GDLGV++G+ G +K+L +M E+ E+++PYRS+ WYMW
Sbjct: 410 GDLGVQRGMAAFVGRDVKKLKNGGNGNGKDKKWKYMSEAEMREISERFRPYRSLFMWYMW 469
Query: 262 RLME 265
R+ E
Sbjct: 470 RVEE 473
>gi|365854927|ref|ZP_09394990.1| base excision DNA repair protein, HhH-GPD family [Acetobacteraceae
bacterium AT-5844]
gi|363719679|gb|EHM02980.1| base excision DNA repair protein, HhH-GPD family [Acetobacteraceae
bacterium AT-5844]
Length = 224
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 105/185 (56%), Gaps = 2/185 (1%)
Query: 80 DPLLATLIDAHRPPTFES-SRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNILP 138
DP+L ++ P + R P+ +L ++I +QQ+ +AA+++ R +ALF G+D P
Sbjct: 24 DPILGPVVRQVGPYRLKPVKREPYEALVRAIAHQQVHGRAAEAMLNRMIALFPGQDFPGP 83
Query: 139 DAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGIL-SDESIVEMDDVTMFKMLTSVKGI 197
VL + LR G S K + + D+A K G++ + + + D + + L +++G+
Sbjct: 84 TDVLKLEDGALRACGFSGAKVAAILDIAHKTAGGLVPTRRAAARLPDEELIERLVALRGV 143
Query: 198 GAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGS 257
G W+V M +IF+L +PD+LPV D GVR+G + GL P ++ + W P+RS +
Sbjct: 144 GRWTVEMLLIFTLGRPDILPVDDFGVREGYRHAAGLDAQPKPKELAAIGAAWAPHRSAAA 203
Query: 258 WYMWR 262
WY+WR
Sbjct: 204 WYLWR 208
>gi|330817520|ref|YP_004361225.1| DNA-3-methyladenine glycosylase [Burkholderia gladioli BSR3]
gi|327369913|gb|AEA61269.1| DNA-3-methyladenine glycosylase [Burkholderia gladioli BSR3]
Length = 302
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 109/196 (55%), Gaps = 3/196 (1%)
Query: 70 DIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVAL 129
D A L +D +L LI P PF++LA+S++ QQ++ +A++++ A+
Sbjct: 104 DKASADLVKRDRILKKLIPKFGPAHLVKRGDPFVTLARSVVGQQISVSSAQAVWA---AI 160
Query: 130 FNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFK 189
+ P V+ + ++L G+S RK+ Y+ DLA+ + G L + M+D +
Sbjct: 161 EAACPKLAPQQVIRLGLEKLAACGLSKRKSEYIIDLAQHFVSGALHVDKWTSMEDEDVIA 220
Query: 190 MLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKW 249
LT ++GIG W+ MF+IF+L +PDVLP+ D G+ + + V Y E + EV W
Sbjct: 221 ELTQIRGIGRWTAEMFLIFNLSRPDVLPLDDPGLIRAISVNYFSGEPVTRSEAREVAANW 280
Query: 250 KPYRSVGSWYMWRLME 265
+P+R+V +WYMWR ++
Sbjct: 281 EPWRTVATWYMWRSLD 296
>gi|121611835|ref|YP_999642.1| HhH-GPD family protein [Verminephrobacter eiseniae EF01-2]
gi|121556475|gb|ABM60624.1| HhH-GPD family protein [Verminephrobacter eiseniae EF01-2]
Length = 234
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 67/194 (34%), Positives = 108/194 (55%), Gaps = 3/194 (1%)
Query: 72 ALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFN 131
A + L KD ++ LI T ++ F +LA+SI+ QQ++ KAA++++ RF L
Sbjct: 38 ACKQLMKKDRVMKRLIPQSGNATLQTRGDAFTTLARSIVGQQISVKAAQTVWERFALL-- 95
Query: 132 GEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKML 191
++ P VL + +R G+S RK YL DL+ + G L + MDD + L
Sbjct: 96 -PCSMKPANVLKLRIDDMRAAGLSARKVDYLVDLSMHFESGQLHVKDWAAMDDEAIIAEL 154
Query: 192 TSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKP 251
+++GIG W+ MF+IF L +P+VLP+ DLG+ G+ + Y + EV + WKP
Sbjct: 155 IAIRGIGRWTAEMFLIFYLMRPNVLPLDDLGLINGISLNYFSGDPVSRSDAREVAQAWKP 214
Query: 252 YRSVGSWYMWRLME 265
+ SV +WY+WR ++
Sbjct: 215 WCSVATWYIWRSLD 228
>gi|255527407|ref|ZP_05394281.1| HhH-GPD family protein [Clostridium carboxidivorans P7]
gi|296184948|ref|ZP_06853359.1| base excision DNA repair protein, HhH-GPD family [Clostridium
carboxidivorans P7]
gi|255508898|gb|EET85264.1| HhH-GPD family protein [Clostridium carboxidivorans P7]
gi|296050730|gb|EFG90153.1| base excision DNA repair protein, HhH-GPD family [Clostridium
carboxidivorans P7]
Length = 200
Score = 124 bits (312), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 65/191 (34%), Positives = 110/191 (57%), Gaps = 4/191 (2%)
Query: 73 LRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNG 132
+ +L+ KD L ID E PF +L +I+ QQ++ KAA++++ R L
Sbjct: 11 IEYLKRKDKRLGAAIDKIGMIKREIIADPFTALVSNIVGQQISSKAAETVWNRLCNLLG- 69
Query: 133 EDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLT 192
NI P+++ S +++ G++ RKA Y++ +A+ G ++ ++ + D+ + K L+
Sbjct: 70 --NITPESIAKASLSEIQGCGMTLRKAGYIKGIADVDISGEVNFNTLYTLTDIEVIKKLS 127
Query: 193 SVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPY 252
S+ G+G W+ M +IFSL +PDV GDL +RKG+ LYGLKEL K + +++ PY
Sbjct: 128 SLNGVGVWTAEMVLIFSLCRPDVASYGDLAIRKGMMNLYGLKELTKE-KFYKYKKRYSPY 186
Query: 253 RSVGSWYMWRL 263
S+ S Y+W L
Sbjct: 187 GSIASLYLWAL 197
>gi|124002144|ref|ZP_01686998.1| HhH-GPD [Microscilla marina ATCC 23134]
gi|123992610|gb|EAY31955.1| HhH-GPD [Microscilla marina ATCC 23134]
Length = 207
Score = 124 bits (312), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 69/193 (35%), Positives = 114/193 (59%), Gaps = 6/193 (3%)
Query: 74 RHLRDKDPLLATLIDAHRPPTFES--SRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFN 131
HL+ KDPLL +I+ + + +L+L +SI+ QQL+ KAA +IY RF LF
Sbjct: 3 EHLK-KDPLLKKVIEQASQTLSLALPKKDIYLALVRSIVGQQLSVKAAATIYQRFRELF- 60
Query: 132 GEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKML 191
E+ P V+A L+ G+S +KA+Y++++A +G L E + D + ++L
Sbjct: 61 PENYPTPKLVVAAELDTLKAAGLSKQKATYIKNVAAFAIEGGLDFEVLNNQTDEEIIQVL 120
Query: 192 TSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGAL--KMEEVCEKW 249
++KG+G W+V M ++F+ +PDV V DLG+++ ++ LY L E AL KM+ + W
Sbjct: 121 ITIKGVGRWTVEMLLMFAFQRPDVFSVDDLGIQQAVKKLYQLDEEGKALKAKMKTIANAW 180
Query: 250 KPYRSVGSWYMWR 262
KPYR++ Y+W+
Sbjct: 181 KPYRTLACLYLWQ 193
>gi|213404852|ref|XP_002173198.1| DNA-3-methyladenine glycosylase [Schizosaccharomyces japonicus
yFS275]
gi|212001245|gb|EEB06905.1| DNA-3-methyladenine glycosylase [Schizosaccharomyces japonicus
yFS275]
Length = 268
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 74/244 (30%), Positives = 127/244 (52%), Gaps = 6/244 (2%)
Query: 26 RKIRKLTTITPITKIAE-IPVATAISTNSDNSPKIFKPLT-FKGEVDIALRHLRDKDPLL 83
R + + T ++ +KI + + V T + D+ I P ++ A HL D
Sbjct: 9 RPLDERTELSLNSKITDSVDVKTNVEITQDSPANITNPGQPTADQLAKAEEHLASIDEHW 68
Query: 84 ATLIDA--HRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNI-LPDA 140
+++A H E R P+ +L +++ YQQL KA K+I R VA + P+
Sbjct: 69 KRVVEAIGHTSFRVEKVRQPYEALIRAVAYQQLTTKAGKAIINRLVAKASATGGFPTPEE 128
Query: 141 VLAVSPQQLREIGVSYRKASYLRDLAEKYTDGIL-SDESIVEMDDVTMFKMLTSVKGIGA 199
+LA+ +QL+ G S RK +R++A G++ S ++ EM + + + L+ + GIG
Sbjct: 129 ILALEQEQLKSCGFSRRKTDTIREIARGVETGLIPSLDAAHEMVNEELIERLSQIHGIGR 188
Query: 200 WSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSWY 259
W+ M +IF + + DVLP GDL +R G + LY + +LP + E+ PYRS+ +WY
Sbjct: 189 WTAEMLLIFGMGRLDVLPAGDLKIRDGFRYLYAMDKLPSLRETNELGCACAPYRSIATWY 248
Query: 260 MWRL 263
++R+
Sbjct: 249 LYRV 252
>gi|390568855|ref|ZP_10249147.1| HhH-GPD family protein [Burkholderia terrae BS001]
gi|389939204|gb|EIN01041.1| HhH-GPD family protein [Burkholderia terrae BS001]
Length = 316
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 66/196 (33%), Positives = 103/196 (52%), Gaps = 3/196 (1%)
Query: 70 DIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVAL 129
D A L +D +L LI P S PF++LA+S++ QQ++ +A+S++ R VA
Sbjct: 118 DKACADLVKRDRILKKLIPKFGPVHLSSRADPFVTLARSVVGQQISVASAQSMWQRIVAA 177
Query: 130 FNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFK 189
++P ++ + L GVS RKA Y+ DLA + G L M+D +
Sbjct: 178 C---PKLVPQQIIKLGQDDLMNCGVSKRKAEYIFDLAHHFVSGALHVGKWTSMEDEDVIA 234
Query: 190 MLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKW 249
LT ++GI W+ MF+IF L +PDVLP+ D + + Y E + EV W
Sbjct: 235 ELTQIRGISRWTAEMFLIFDLSRPDVLPLDDPNLIHAISQNYFSGEPVTRSEAREVAANW 294
Query: 250 KPYRSVGSWYMWRLME 265
+P+R+V +WYMWR ++
Sbjct: 295 EPWRTVATWYMWRSLD 310
>gi|389872885|ref|YP_006380304.1| DNA-3-methyladenine glycosylase [Advenella kashmirensis WT001]
gi|388538134|gb|AFK63322.1| DNA-3-methyladenine glycosylase [Advenella kashmirensis WT001]
Length = 216
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 64/193 (33%), Positives = 109/193 (56%), Gaps = 2/193 (1%)
Query: 70 DIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVAL 129
D A+ L KD +L +I A+ ++++ F++LA++I+ QQ++ K A + F L
Sbjct: 24 DEAVTFLIKKDRILRKIIPANPDLWLATNKTAFVTLARAIIGQQISSKTADLHWKNFTQL 83
Query: 130 FNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFK 189
+ P VL + Q RE G+S RK Y+ DLA + + ++ +MDD +
Sbjct: 84 CGHRPS--PATVLEYNEAQWREAGLSKRKTEYILDLANHFNERKVNPLKWSKMDDEDIIT 141
Query: 190 MLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKW 249
L +++GI W+ MF+IF+LH+PD+LP+ D G+ K + Y E ++ EV + W
Sbjct: 142 ELCAIRGISRWTAEMFLIFNLHRPDILPIDDPGLLKAISEHYFSGEPVSRYEVREVAQSW 201
Query: 250 KPYRSVGSWYMWR 262
+P+R+V +WY+WR
Sbjct: 202 QPWRTVATWYLWR 214
>gi|172061027|ref|YP_001808679.1| HhH-GPD family protein [Burkholderia ambifaria MC40-6]
gi|171993544|gb|ACB64463.1| HhH-GPD family protein [Burkholderia ambifaria MC40-6]
Length = 287
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 114/214 (53%), Gaps = 7/214 (3%)
Query: 53 SDNSPKIFKPLTFKGEVDIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQ 112
+D + + +P + D A L +D +L LI P PF++LA+S++ Q
Sbjct: 77 ADGADGVARPAYW----DKACADLVKRDRILKKLIPKFGPAHLVKRGDPFVTLARSVVGQ 132
Query: 113 QLAYKAAKSIYTRFVALFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDG 172
Q++ +A++++ + + + P V+ + +L G+S RK Y+ DLA+ + G
Sbjct: 133 QISVPSAQALWA---CIEDACPKLAPQPVIRLGADKLIACGLSKRKTEYILDLAQHFVSG 189
Query: 173 ILSDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYG 232
L + MDD + LT ++GI W+ MF+IF+L +PDVLP+ D G+ + + V Y
Sbjct: 190 ALHVDKWTSMDDEDVIAELTQIRGISRWTAEMFLIFNLSRPDVLPLDDPGLIRAISVNYF 249
Query: 233 LKELPGALKMEEVCEKWKPYRSVGSWYMWRLMEA 266
E + EV W+P+R+V +WYMWR ++A
Sbjct: 250 SGEPVTRSEAREVAANWEPWRTVATWYMWRSLDA 283
>gi|325920815|ref|ZP_08182716.1| 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase
[Xanthomonas gardneri ATCC 19865]
gi|325548712|gb|EGD19665.1| 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase
[Xanthomonas gardneri ATCC 19865]
Length = 224
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 72/203 (35%), Positives = 113/203 (55%), Gaps = 6/203 (2%)
Query: 68 EVDIALRHLRDKDPLLATLIDAHRP----PTFESSRSPFLSLAKSILYQQLAYKAAKSIY 123
+V+ A HL +D L + P P + P +LA++IL+QQL+ KAA +I
Sbjct: 9 DVEAAFAHLTRRDRALGAWMKRIGPIAPQPGWRKPFDPVDALARAILFQQLSGKAASTIV 68
Query: 124 TRFVALFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDG-ILSDESIVEM 182
R V + G + D + + LR GVS KA LRDLA + +G I S + M
Sbjct: 69 AR-VEVAIGAQRLHADTLARIDDAALRACGVSGNKALALRDLARRELEGEIPSLRKLAFM 127
Query: 183 DDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKM 242
+D + + L V+GIG W+V M ++F L +PD+LP+ DLGVRKG Q + +++P ++
Sbjct: 128 EDEAIVEALIPVRGIGRWTVEMMLMFRLGRPDLLPIDDLGVRKGAQRVDKQEQMPTPKEL 187
Query: 243 EEVCEKWKPYRSVGSWYMWRLME 265
E+W PYRS ++Y+W++ +
Sbjct: 188 AARGERWGPYRSYAAFYLWKIAD 210
>gi|83748961|ref|ZP_00945970.1| DNA-3-methyladenine glycosylase II [Ralstonia solanacearum UW551]
gi|207744188|ref|YP_002260580.1| dna-3-methyladenine glycosylase protein [Ralstonia solanacearum
IPO1609]
gi|83724384|gb|EAP71553.1| DNA-3-methyladenine glycosylase II [Ralstonia solanacearum UW551]
gi|206595593|emb|CAQ62520.1| dna-3-methyladenine glycosylase protein [Ralstonia solanacearum
IPO1609]
Length = 215
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 58/167 (34%), Positives = 96/167 (57%), Gaps = 1/167 (0%)
Query: 98 SRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNILPDAVLAVSPQQLREIGVSYR 157
+R P+ +L ++I YQQL KA +I R +AL+ G D P +L LR G S
Sbjct: 46 AREPYEALVRAIAYQQLHAKAGDAILGRLLALYPGTDFPSPGQLLDTDETALRGCGFSAT 105
Query: 158 KASYLRDLAEKYTDGIL-SDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVL 216
K + +R +A+ DG++ + + M D + + L +++G+G W+V M +I++L + D+L
Sbjct: 106 KLATIRGIAQASLDGVVPTRGEALAMPDEALIERLVTLRGVGRWTVEMLLIYTLERSDIL 165
Query: 217 PVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSWYMWRL 263
P D GVR+G + L L+ P +M E W PYR++ +WY+WR+
Sbjct: 166 PADDFGVREGYRRLKRLEAAPTRRQMMETGRAWSPYRTIAAWYLWRM 212
>gi|257051379|ref|YP_003129212.1| HhH-GPD family protein [Halorhabdus utahensis DSM 12940]
gi|256690142|gb|ACV10479.1| HhH-GPD family protein [Halorhabdus utahensis DSM 12940]
Length = 190
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 67/190 (35%), Positives = 107/190 (56%), Gaps = 7/190 (3%)
Query: 76 LRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDN 135
LRD DP +A L+ H + E + PF L SI+ QQL+ +A +I R F+
Sbjct: 8 LRD-DPAMAPLVAEHGELSVEPAEDPFERLVTSIVRQQLSMASADAIEERLFEHFD---- 62
Query: 136 ILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVK 195
+ P A+ V +QLR++GVS RK +R++A + + + D + LT +
Sbjct: 63 VTPTALRDVPVEQLRDVGVSGRKGQTIRNVASAWQAHDYTQAAFDGRSDEAVIDELTDIS 122
Query: 196 GIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSV 255
GIG W+ MF++F+L + DV PV DLG+RKG+Q ++ ++ M E+W+PYRS+
Sbjct: 123 GIGPWTAKMFLMFALGREDVFPVEDLGIRKGMQTIF--EDDMERQAMVARAERWQPYRSI 180
Query: 256 GSWYMWRLME 265
S Y+WR+++
Sbjct: 181 ASMYLWRVVD 190
>gi|375149252|ref|YP_005011693.1| DNA-3-methyladenine glycosylase II [Niastella koreensis GR20-10]
gi|361063298|gb|AEW02290.1| DNA-3-methyladenine glycosylase II [Niastella koreensis GR20-10]
Length = 205
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 65/187 (34%), Positives = 104/187 (55%), Gaps = 4/187 (2%)
Query: 79 KDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNILP 138
KD ++ LID H T + ++ L SI+ QQL+ K A IY RF+ L+ G + P
Sbjct: 9 KDRIIKKLIDNHGILTLKKQKNICTYLCASIMSQQLSTKVADVIYQRFLNLYGGNEPT-P 67
Query: 139 DAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIG 198
+ V+A +P+ LR IG+S K SY++++A + + + +M+D + LT +KG+G
Sbjct: 68 EQVVATAPETLRAIGLSNAKVSYVQNVARFAIEHGMEHSRLHKMNDEQVITYLTQIKGVG 127
Query: 199 AWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEE---VCEKWKPYRSV 255
W+V M +IF+L + DV + DLGV+ + LY L E+ + +KW PYR+
Sbjct: 128 RWTVEMLLIFALKREDVFALDDLGVQNAMIALYKLDRTDKKRFREDMVRISKKWSPYRTY 187
Query: 256 GSWYMWR 262
Y+WR
Sbjct: 188 ACMYLWR 194
>gi|389808165|ref|ZP_10204575.1| DNA-3-methyladenine glycosylase II [Rhodanobacter thiooxydans LCS2]
gi|388443043|gb|EIL99202.1| DNA-3-methyladenine glycosylase II [Rhodanobacter thiooxydans LCS2]
Length = 210
Score = 124 bits (310), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 62/176 (35%), Positives = 97/176 (55%), Gaps = 4/176 (2%)
Query: 89 AHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNILPDAVLAVSPQQ 148
H P + +R P+ +L +++ YQQL KA +I R +AL + P +L
Sbjct: 27 GHEP---KPAREPYEALVRAVAYQQLHVKAGDAILARLLALHLQQAFPSPAQLLDADVDS 83
Query: 149 LREIGVSYRKASYLRDLAEKYTDGILSD-ESIVEMDDVTMFKMLTSVKGIGAWSVHMFMI 207
LR G S RK +R +A DGI+ D + + + D + L +KGIG W+V MF+I
Sbjct: 84 LRRCGFSARKIETIRGIAAATVDGIVPDLATALALPDEELVARLCVLKGIGRWTVEMFLI 143
Query: 208 FSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSWYMWRL 263
+SL +PD+LPV D GVR+G ++L L P + + +W P+R+ +WY+WR+
Sbjct: 144 YSLDRPDILPVDDFGVREGYRLLKSLDTAPAPKALAAIGAEWSPHRTAAAWYLWRV 199
>gi|171322752|ref|ZP_02911492.1| HhH-GPD family protein [Burkholderia ambifaria MEX-5]
gi|171091902|gb|EDT37378.1| HhH-GPD family protein [Burkholderia ambifaria MEX-5]
Length = 227
Score = 124 bits (310), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 114/214 (53%), Gaps = 7/214 (3%)
Query: 53 SDNSPKIFKPLTFKGEVDIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQ 112
+D + + +P + D A L +D +L LI P PF++LA+S++ Q
Sbjct: 17 ADGADGVVRPAYW----DKACADLVKRDRILKKLIPKFGPAHLVKRGDPFVTLARSVVGQ 72
Query: 113 QLAYKAAKSIYTRFVALFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDG 172
Q++ +A++ + R + + + P V+ + +L G+S RK Y+ DLA+ + G
Sbjct: 73 QISVPSAQAQWAR---IEDACPKLAPQPVIRLGADKLIACGLSKRKTEYILDLAQHFVSG 129
Query: 173 ILSDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYG 232
L + MDD + LT ++GI W+ MF+IF+L +PDVLP+ D G+ + + V Y
Sbjct: 130 ALHVDKWTSMDDEDVIAELTQIRGISRWTAEMFLIFNLSRPDVLPLDDPGLIRAISVNYF 189
Query: 233 LKELPGALKMEEVCEKWKPYRSVGSWYMWRLMEA 266
E + EV W+P+R+V +WYMWR ++A
Sbjct: 190 SGEPVTRSEAREVAANWEPWRTVATWYMWRSLDA 223
>gi|354611154|ref|ZP_09029110.1| HhH-GPD family protein [Halobacterium sp. DL1]
gi|353195974|gb|EHB61476.1| HhH-GPD family protein [Halobacterium sp. DL1]
Length = 191
Score = 124 bits (310), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 63/187 (33%), Positives = 101/187 (54%), Gaps = 6/187 (3%)
Query: 80 DPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNILPD 139
DP +A L+ H + F L SIL QQ++ +A +I R F + P
Sbjct: 11 DPEMAPLVAEHGELELDLVEDTFQRLVTSILRQQVSIASADAIEERLFDRFE----VTPA 66
Query: 140 AVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIGA 199
+ A P L+++G+S KA Y++++A Y + ++ D + LTS+ G+G
Sbjct: 67 VIAAADPLALQDVGLSAAKADYVQNVATAYRERGYDRAFFADLSDDAVHDELTSIAGVGP 126
Query: 200 WSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSWY 259
W+ MF++F+L + DV PVGDLG+RKG++ LYG + +M ++ E+W+P RS S Y
Sbjct: 127 WTADMFLMFALGREDVFPVGDLGIRKGMEALYGAETTRA--EMRDIAERWRPVRSYASLY 184
Query: 260 MWRLMEA 266
+WR E
Sbjct: 185 LWRAYEG 191
>gi|392396195|ref|YP_006432796.1| 3-methyladenine DNA glycosylase [Flexibacter litoralis DSM 6794]
gi|390527273|gb|AFM03003.1| 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase
[Flexibacter litoralis DSM 6794]
Length = 211
Score = 124 bits (310), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 72/203 (35%), Positives = 119/203 (58%), Gaps = 16/203 (7%)
Query: 72 ALRHLRDKDPLLATLIDAHRPPTFE--------SSRSPFLSLAKSILYQQLAYKAAKSIY 123
A +HL KDPL ++++ TF+ S + SL K+I+ QQL+ KAA +IY
Sbjct: 5 AKKHL-SKDPLFIPVLESVEINTFKDLEDEGIKSEVNIMTSLIKAIVSQQLSVKAADTIY 63
Query: 124 TRFVALFNGEDNILPDA--VLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVE 181
RF+ LF+G + P+A +L + L+ +G+S +K +Y+R++A +S E I +
Sbjct: 64 KRFLGLFDG---VSPNATVLLETDIETLKSVGLSKQKITYIREVALFAQKNDISIEFINQ 120
Query: 182 MDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGAL- 240
+ + + LT +KG+G W+V M ++F+L +PDV PV DLG+++ +Q L +E L
Sbjct: 121 KSNEEVIEYLTQIKGVGRWTVEMLLMFTLWRPDVFPVADLGIQQAIQKLLKTEEKGKELI 180
Query: 241 -KMEEVCEKWKPYRSVGSWYMWR 262
+M EKWKPYR+ + Y+W+
Sbjct: 181 KRMIIYSEKWKPYRTFAAMYLWK 203
>gi|374262978|ref|ZP_09621537.1| hypothetical protein LDG_7976 [Legionella drancourtii LLAP12]
gi|363536636|gb|EHL30071.1| hypothetical protein LDG_7976 [Legionella drancourtii LLAP12]
Length = 207
Score = 124 bits (310), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 68/194 (35%), Positives = 110/194 (56%), Gaps = 3/194 (1%)
Query: 72 ALRHLRDKDPLLATLIDAHRPPTFE--SSRSPFLSLAKSILYQQLAYKAAKSIYTRFVAL 129
A +L + D A L+ P E ++R+P+ +L ++I YQQL +AA++I RF+A+
Sbjct: 13 ASHYLSELDADWALLVQRIGPCQLEIQTTRAPYEALIRAIAYQQLHGRAAEAILNRFLAI 72
Query: 130 FNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDG-ILSDESIVEMDDVTMF 188
+ LP+ +LA + LR+ G S RK ++ LAE G + + E M +
Sbjct: 73 YPEHSFPLPEEILATESELLRQCGFSARKLETIKRLAEASLIGHVPTLEKAKLMSTEDLI 132
Query: 189 KMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEK 248
K LT + GIG W+V M +IF+L + D+LP D GVR+G + + L + P ++ ++
Sbjct: 133 KELTLLPGIGPWTVEMLLIFTLGRMDILPAHDFGVREGYKKMKDLPQQPTPKELAKIGAT 192
Query: 249 WKPYRSVGSWYMWR 262
W PYRS+ +WY+WR
Sbjct: 193 WSPYRSIAAWYLWR 206
>gi|256419901|ref|YP_003120554.1| HhH-GPD family protein [Chitinophaga pinensis DSM 2588]
gi|256034809|gb|ACU58353.1| HhH-GPD family protein [Chitinophaga pinensis DSM 2588]
Length = 206
Score = 124 bits (310), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 71/197 (36%), Positives = 115/197 (58%), Gaps = 10/197 (5%)
Query: 70 DIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVAL 129
++ L HL KD LA ++ P ++ L L SI+ QQL+ K A IYTRF+AL
Sbjct: 6 EVHLVHL-SKDKKLAGIM-TEPLPALNVQKNIALKLIGSIMSQQLSVKVATVIYTRFLAL 63
Query: 130 FNGEDNILPDA--VLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTM 187
++G++ P+A +L P+ LR IG+S K SY+ ++A + L+D+ +++MDD +
Sbjct: 64 YDGKE---PNAQQILDTPPETLRSIGLSNAKVSYVHNVARFTVEEKLTDKKLLQMDDEEV 120
Query: 188 FKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGAL---KMEE 244
K LT +KG+G W+V M ++F L + DV + DLG+++ + LY L K+ +
Sbjct: 121 IKYLTQIKGVGRWTVEMLLMFYLCREDVFAIDDLGLQQAMIKLYKLDNTDKKAFREKLLK 180
Query: 245 VCEKWKPYRSVGSWYMW 261
+ +KW PYR+ S Y+W
Sbjct: 181 ISKKWSPYRTYASRYLW 197
>gi|433678687|ref|ZP_20510518.1| DNA-3-methyladenine glycosylase II [Xanthomonas translucens pv.
translucens DSM 18974]
gi|430816201|emb|CCP41024.1| DNA-3-methyladenine glycosylase II [Xanthomonas translucens pv.
translucens DSM 18974]
Length = 224
Score = 124 bits (310), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 75/203 (36%), Positives = 109/203 (53%), Gaps = 6/203 (2%)
Query: 68 EVDIALRHLRDKDPLLATLIDAHRP----PTFESSRSPFLSLAKSILYQQLAYKAAKSIY 123
+ A HL +D L + P P + P +LA++IL+QQL+ KAA +I
Sbjct: 9 DTQAAYDHLSRRDRKLGAWMRRIGPIAPQPGWARPFDPVDALARAILFQQLSGKAAATIV 68
Query: 124 TRFVALFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDG-ILSDESIVEM 182
R A G + D + + LR GVS KA LRDLA + G I S + M
Sbjct: 69 GRVEAAI-GSIRLHADTLARIDDPGLRACGVSANKALALRDLARREAAGEIPSLRKLAFM 127
Query: 183 DDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKM 242
DD + + L V+GIG W+V M ++F L +P +LPV DLGVRKG Q + L+++P +
Sbjct: 128 DDEAIVQALLPVRGIGRWTVEMMLLFRLGRPALLPVDDLGVRKGAQRVGQLQQMPAPQSL 187
Query: 243 EEVCEKWKPYRSVGSWYMWRLME 265
E E+W PYRS S+Y+W++ +
Sbjct: 188 AEHGERWGPYRSYASFYLWKIAD 210
>gi|345856597|ref|ZP_08809074.1| hhH-GPD superbase excision DNA repair family protein
[Desulfosporosinus sp. OT]
gi|344330353|gb|EGW41654.1| hhH-GPD superbase excision DNA repair family protein
[Desulfosporosinus sp. OT]
Length = 208
Score = 124 bits (310), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 67/189 (35%), Positives = 109/189 (57%), Gaps = 4/189 (2%)
Query: 75 HLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGED 134
HL+ KD LA ID E + PF +L S++ QQ++ KAA +++ R L +
Sbjct: 21 HLKRKDKKLAVAIDKIGIIKREITPDPFRALISSVVSQQISNKAAATVWNRLCTLL---E 77
Query: 135 NILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSV 194
+I P+++ VS +++ G+S RKA Y++ +A GI+ +S+ + D + K L+S+
Sbjct: 78 DITPESIAQVSLPEIQACGMSERKAGYIKGIANAANLGIVDFKSLHTLTDEEIIKKLSSL 137
Query: 195 KGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRS 254
G+G W+ M +IFS +PDV+ DL + +G+ LYGLKEL K E +++ PY +
Sbjct: 138 HGVGVWTAEMLLIFSFCRPDVVSYKDLAICRGMMNLYGLKELSKE-KFERYRKRYTPYGT 196
Query: 255 VGSWYMWRL 263
V S Y+W L
Sbjct: 197 VASLYLWAL 205
>gi|226293001|gb|EEH48421.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb18]
Length = 426
Score = 123 bits (309), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 96/311 (30%), Positives = 137/311 (44%), Gaps = 69/311 (22%)
Query: 6 HTSDNISQNPSASSKITFPPRKIRKLTTITPITKIAEIPVATAISTNSDNSPKIFKPLTF 65
H ++ I + P S +P K T++P S S ++ +P T
Sbjct: 123 HLTNAILRTPRGSHLTAYPVEKPSDAATLSP----------------SKCSGRLPRPTTT 166
Query: 66 KGEV-DIALRHLRDKDPLLATLIDAHRPPTFESSR-----SPFLSLAKSILYQQLAYKAA 119
G V + A+ HL P L +ID H P F + PF +L I+ QQ++ AA
Sbjct: 167 TGTVLEEAVAHLITVAPQLKPVIDKHPCPLFSPAGLAEEIDPFNALVSGIIGQQVSGAAA 226
Query: 120 KSIYTRFVALF-----NG-----------------------------EDNI-LPDAVLAV 144
KSI RF+ LF NG +D+ P V A
Sbjct: 227 KSIKRRFLGLFGCLDCNGNAEASNNGVNATEKGVGEEKERAEMRYDRDDHFPTPAQVAAC 286
Query: 145 SPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIGAWSVHM 204
LR G+S RKA Y++ LAEK+ G LS +++ D + + L +V+G+G WSV M
Sbjct: 287 GVATLRTAGLSQRKAEYIQGLAEKFASGELSAHMLLQASDEEVLEKLIAVRGLGRWSVEM 346
Query: 205 FMIFSLHKPDVLPVGDLGVRKGLQVLYG-----LK-ELPGALK------MEEVCEKWKPY 252
F F L + DV GDLGV++G+ G LK + G K M E+ + PY
Sbjct: 347 FECFGLKRMDVFSTGDLGVQRGMATFVGRDVSKLKTKGSGKFKYMSEKEMLEIAAPFSPY 406
Query: 253 RSVGSWYMWRL 263
RS+ WYMWR+
Sbjct: 407 RSLLMWYMWRI 417
>gi|299065820|emb|CBJ36998.1| na-3-methyladenine glycosylase protein [Ralstonia solanacearum
CMR15]
Length = 213
Score = 123 bits (309), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 55/167 (32%), Positives = 98/167 (58%), Gaps = 1/167 (0%)
Query: 98 SRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNILPDAVLAVSPQQLREIGVSYR 157
+R P+ +L ++I YQQL +A +I R +AL+ G P +L LR G S
Sbjct: 44 ARDPYEALVRAIAYQQLHARAGDAILGRLLALYPGAGFPSPGQLLDTDAATLRGCGFSAT 103
Query: 158 KASYLRDLAEKYTDGIL-SDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVL 216
K + +R +A+ DG++ + + + + D + + L +++G+G W+V M +I++L + D+L
Sbjct: 104 KLATIRGIAQATLDGVVPTRDQALALPDEALIERLVTLRGVGRWTVEMLLIYTLERADIL 163
Query: 217 PVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSWYMWRL 263
P D GVR+G + L L+ P +M E+ W+PYR++ +WY+WR+
Sbjct: 164 PADDFGVREGYRRLKHLETAPTRRQMTEIGRAWRPYRTIAAWYLWRM 210
>gi|320449265|ref|YP_004201361.1| DNA-3-methyladenine glycosidase [Thermus scotoductus SA-01]
gi|320149434|gb|ADW20812.1| DNA-3-methyladenine glycosidase [Thermus scotoductus SA-01]
Length = 183
Score = 123 bits (309), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 67/166 (40%), Positives = 104/166 (62%), Gaps = 10/166 (6%)
Query: 100 SPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNILPDAVLAVSPQQLREIGVSYRKA 159
PF LA+SI+ QQL+ KAA +I R + P+A+L VSP LR+ G+S+ KA
Sbjct: 28 EPFKVLAESIVAQQLSGKAAAAISARLWSRVEPH----PEALLQVSPAILRQAGLSHAKA 83
Query: 160 SYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVG 219
LRDLA + +G+L + + ++D + + L V+GIG W+V MF++F L +PDV PVG
Sbjct: 84 QALRDLAARSLEGLL--DGLDSLEDEAVKERLLQVRGIGPWTVDMFLMFGLRRPDVWPVG 141
Query: 220 DLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSWYMWRLME 265
DLG+R+ + L+ ++ AL + E ++PYRS +WY+WR ++
Sbjct: 142 DLGLRRAAKALFDVE----ALGLPAFGEPFRPYRSHLAWYLWRTLD 183
>gi|119898124|ref|YP_933337.1| DNA-3-methyladenine glycosylase II [Azoarcus sp. BH72]
gi|119670537|emb|CAL94450.1| DNA-3-methyladenine glycosylase II [Azoarcus sp. BH72]
Length = 229
Score = 123 bits (309), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 70/195 (35%), Positives = 102/195 (52%), Gaps = 3/195 (1%)
Query: 71 IALRHLRDKDPLLATLIDAHRPPTFES--SRSPFLSLAKSILYQQLAYKAAKSIYTRFVA 128
+A HL D A L+ A P + +R P+ +L +++ YQQLA I R +A
Sbjct: 17 LATAHLAGIDADWARLVTAVGPCLLQPKPAREPYEALVRAVAYQQLATSVGDRIIGRLLA 76
Query: 129 LFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGIL-SDESIVEMDDVTM 187
L+ P+ +LA LR G S RK + +A+ G++ S V MDD +
Sbjct: 77 LYPDSAFPQPEQLLATGFDALRGCGFSARKIETIHGIAQGTLSGLVPSRADAVSMDDEAL 136
Query: 188 FKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCE 247
L ++GIG W+V M +IF+L + DVLPV D GVR+G + L L E+PG +M
Sbjct: 137 IARLVELRGIGRWTVEMLLIFTLERIDVLPVDDFGVREGYRHLKSLDEMPGRKEMARAGL 196
Query: 248 KWKPYRSVGSWYMWR 262
PYR+V +WY+WR
Sbjct: 197 VCSPYRTVAAWYLWR 211
>gi|402082598|gb|EJT77616.1| hypothetical protein GGTG_02722 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 479
Score = 123 bits (309), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 79/240 (32%), Positives = 119/240 (49%), Gaps = 43/240 (17%)
Query: 69 VDIALRHLRDKDPLLATLIDAHR-----PPTFESSRSPFLSLAKSILYQQLAYKAAKSIY 123
+D A +L D + +L++AH P PF SL I+ QQ++ AA+SI
Sbjct: 233 LDEACAYLVRVDARMRSLVEAHHCHIFSPEGLAEEIDPFESLCSGIISQQVSGAAARSIK 292
Query: 124 TRFVALFNGEDNIL-------------------------PDAVLAVSPQQLREIGVSYRK 158
+FVALF+ + P V A S ++LR G+S RK
Sbjct: 293 AKFVALFSPPPSPPSPPPHSGGDDDDTATTTEPPRRFPQPSQVAAASLERLRTAGLSQRK 352
Query: 159 ASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPV 218
A Y++ LA K+ G LS ++ + + LT+V+G+G WSV MF F+L + DV +
Sbjct: 353 AEYVQGLAAKFASGELSAAALADAPYDEVVARLTAVRGLGQWSVEMFACFALKRMDVFSL 412
Query: 219 GDLGVRKGLQVLYG--LKELPGALK-----------MEEVCEKWKPYRSVGSWYMWRLME 265
GDLGV++G+ G + +L A K M E+ +++KPYRS+ WYMWR+ E
Sbjct: 413 GDLGVQRGMAAFVGRDVAKLKAAGKGGKWKYMNEADMRELSDRFKPYRSLFMWYMWRVEE 472
>gi|313200503|ref|YP_004039161.1| DNA-3-methyladenine glycosylase ii [Methylovorus sp. MP688]
gi|312439819|gb|ADQ83925.1| DNA-3-methyladenine glycosylase II [Methylovorus sp. MP688]
Length = 224
Score = 123 bits (309), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 62/165 (37%), Positives = 96/165 (58%), Gaps = 1/165 (0%)
Query: 99 RSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNILPDAVLAVSPQQLREIGVSYRK 158
R P+ +L +++ +QQL AA +I +R +A F + + + QLR G+S K
Sbjct: 42 REPYEALVRAVAHQQLHGNAAAAILSRLMASFPHDSFPSAEQLATADETQLRSCGLSMAK 101
Query: 159 ASYLRDLAEKYTDGILSDESIV-EMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLP 217
+ +R +A G + SI +M + + LTS+KGIG W+V M +IFSL + DVLP
Sbjct: 102 VNAIRGIAAATLAGTVPSASIAADMSEEELITRLTSLKGIGRWTVEMLLIFSLGRNDVLP 161
Query: 218 VGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSWYMWR 262
V D GVR+G ++L L E P + + E+WKPYRS+ +WY+W+
Sbjct: 162 VDDFGVREGWRLLKNLPEQPKPKALAVIGEQWKPYRSIAAWYLWQ 206
>gi|398805222|ref|ZP_10564201.1| HhH-GPD superfamily base excision DNA repair protein [Polaromonas
sp. CF318]
gi|398092003|gb|EJL82425.1| HhH-GPD superfamily base excision DNA repair protein [Polaromonas
sp. CF318]
Length = 241
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 69/198 (34%), Positives = 106/198 (53%), Gaps = 3/198 (1%)
Query: 73 LRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNG 132
+HL KD ++ LI ++ F +LA+SI+ QQ++ KAA++++ RF AL
Sbjct: 32 CKHLVKKDRVMKRLIPQFGDAHLQARGDAFSTLARSIVGQQISVKAAQTVWHRFEAL--- 88
Query: 133 EDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLT 192
+ P VL + +R G+S RK YL DLA + G + + MDD + L
Sbjct: 89 PKKMTPANVLRLKVDDMRAAGLSARKVEYLVDLAINFDAGTVHVKDWQSMDDEAIIAELV 148
Query: 193 SVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPY 252
+++GIG W+ MF+IF L +P+VLP+ D+G+ G+ Y E EV W PY
Sbjct: 149 AIRGIGRWTAEMFLIFYLMRPNVLPLDDIGLISGISQNYFSGESVSRSDAREVAAAWAPY 208
Query: 253 RSVGSWYMWRLMEAKGVL 270
SV +WY+WR ++ VL
Sbjct: 209 CSVATWYIWRSLDPLPVL 226
>gi|164423749|ref|XP_960805.2| hypothetical protein NCU08938 [Neurospora crassa OR74A]
gi|157070220|gb|EAA31569.2| hypothetical protein NCU08938 [Neurospora crassa OR74A]
Length = 468
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 81/247 (32%), Positives = 114/247 (46%), Gaps = 50/247 (20%)
Query: 69 VDIALRHLRDKDPLLATLIDAH-----RPPTFESSRSPFLSLAKSILYQQLAYKAAKSIY 123
++ A HL DP + LID H P PF SL SI+ QQ++ AAKSI
Sbjct: 215 LEKACAHLIAIDPRMKPLIDKHPCRVFSPEGLAEQIDPFESLVSSIISQQVSGAAAKSIK 274
Query: 124 TRFVALFNGEDNI----------------------------LPDAVLAVSPQQLREIGVS 155
+FVALF ED+ P +LA LR G+S
Sbjct: 275 AKFVALFEEEDDPPSDQEDGKEKKKTQENDPTPTPTKRRFPTPAHILAKDLPTLRTAGLS 334
Query: 156 YRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDV 215
RKA Y+ LA K+ G LS + + L +V+G+G W+V MF F+L + DV
Sbjct: 335 QRKAEYIHGLAAKFASGELSASLLASAPYEELVAKLVAVRGLGLWTVEMFACFALKRMDV 394
Query: 216 LPVGDLGVRKGLQVLYG--LKELPGA---------------LKMEEVCEKWKPYRSVGSW 258
+GDLGV++G+ G +K+L +M E+ E+++PYRS+ W
Sbjct: 395 FSLGDLGVQRGMAAFVGRDVKKLKNGGNGNGKDKKWKYMSEAEMREISERFRPYRSLFMW 454
Query: 259 YMWRLME 265
YMWR+ E
Sbjct: 455 YMWRVEE 461
>gi|421467268|ref|ZP_15915904.1| base excision DNA repair protein, HhH-GPD family [Burkholderia
multivorans ATCC BAA-247]
gi|400233847|gb|EJO63355.1| base excision DNA repair protein, HhH-GPD family [Burkholderia
multivorans ATCC BAA-247]
Length = 293
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 65/197 (32%), Positives = 106/197 (53%), Gaps = 3/197 (1%)
Query: 70 DIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVAL 129
D A L +D +L LI P F++LA+S++ QQ++ +A+S++ R A
Sbjct: 95 DKACADLVKRDRILKKLIPKFGPAHLVKRGDSFVTLARSVVGQQISVPSAQSLWARIQAA 154
Query: 130 FNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFK 189
+ P V+ + +L G+S RK Y+ DLA+ + G L + M+D +
Sbjct: 155 C---PKLAPQPVIRLGADKLIACGLSKRKTEYILDLAQHFVSGALHVDKWTSMEDEAVIA 211
Query: 190 MLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKW 249
LT ++GI W+ MF+IF+L +PDVLP+ D G+ + + V Y E + EV W
Sbjct: 212 ELTQIRGISRWTAEMFLIFNLSRPDVLPLDDPGLIRAISVNYFSGEPVTRSEAREVAANW 271
Query: 250 KPYRSVGSWYMWRLMEA 266
+P+R+V +WYMWR ++A
Sbjct: 272 EPWRTVATWYMWRSLDA 288
>gi|212704565|ref|ZP_03312693.1| hypothetical protein DESPIG_02625 [Desulfovibrio piger ATCC 29098]
gi|212671964|gb|EEB32447.1| base excision DNA repair protein, HhH-GPD family [Desulfovibrio
piger ATCC 29098]
Length = 269
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 69/202 (34%), Positives = 108/202 (53%), Gaps = 6/202 (2%)
Query: 72 ALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFN 131
A+ HL KD LA + A P E F +L +I QQ++ A ++++ R AL
Sbjct: 50 AVEHLARKDKKLAAAMQAIGPVRREVMPDLFQALMHAITGQQISMAAQRTVWGRLCALLG 109
Query: 132 GEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKML 191
+ P A+LA P L+ +G+S RK Y+R +A + DG L + +DD + + L
Sbjct: 110 ---EVTPQALLAQPPAALQALGLSARKVDYMRGIARQVVDGELDLPGMAALDDAEVCRRL 166
Query: 192 TSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKP 251
+++GIG W+ M ++FSL +PD+L DL +R+GL++LY KE+P P
Sbjct: 167 AALRGIGVWTAEMLLLFSLQRPDILSYDDLAIRRGLRMLYRHKEMPRERFERYRRRF-SP 225
Query: 252 YRSVGSWYMWRLMEAKGVLPNV 273
Y S+ S Y+W + A G LP +
Sbjct: 226 YGSLASLYLWAI--AGGALPEL 245
>gi|348618233|ref|ZP_08884763.1| putative DNA-3-methyladenine glycosylase [Candidatus Glomeribacter
gigasporarum BEG34]
gi|347816480|emb|CCD29466.1| putative DNA-3-methyladenine glycosylase [Candidatus Glomeribacter
gigasporarum BEG34]
Length = 233
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 63/194 (32%), Positives = 103/194 (53%), Gaps = 3/194 (1%)
Query: 72 ALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFN 131
A L + D +L LI P R PF++LA++I+ QQ++ KAA +I+ R +
Sbjct: 37 ACAELSESDRILKKLIPLFEPAAAHQRRDPFITLARAIVGQQISVKAAHAIWMRIERAYP 96
Query: 132 GEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKML 191
+ P + L G+S RK Y+ DLA ++ + ++ +DD + L
Sbjct: 97 A---LTPAQLAQCEHDSLLRCGLSKRKTEYILDLAHHFSTRAVQADAWEALDDEAIIASL 153
Query: 192 TSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKP 251
++GIG W+ MF+IF+L +PDVLP+ DLG+ + + + Y E + EV W+P
Sbjct: 154 MRIRGIGRWTAEMFLIFNLMRPDVLPLDDLGLLRAISLNYFSGEPVSRSEAREVAANWQP 213
Query: 252 YRSVGSWYMWRLME 265
+RSV WY+WR ++
Sbjct: 214 WRSVAVWYLWRSLD 227
>gi|149926800|ref|ZP_01915059.1| 3-methyladenine DNA glycosylase II [Limnobacter sp. MED105]
gi|149824352|gb|EDM83570.1| 3-methyladenine DNA glycosylase II [Limnobacter sp. MED105]
Length = 217
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 63/187 (33%), Positives = 108/187 (57%), Gaps = 2/187 (1%)
Query: 79 KDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNILP 138
+ P+ L+ H S +P+ ++ +S++ QQ++ KAA +++ R V NG+ I
Sbjct: 27 QSPVWVELLARHSDRALRSRGAPYETMLRSLVGQQISVKAADAVWARVVDALNGK--ITS 84
Query: 139 DAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIG 198
A+LA+S L+ G+S +K +Y R L+E G L + MDD + L ++KG+G
Sbjct: 85 RALLALSDDTLKATGLSRQKIAYSRALSEFEQQGGLELAVLEGMDDEACTRHLCAIKGVG 144
Query: 199 AWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSW 258
W+ MF++F L +PDV PV D+GV++G+ + E G + + EK KP+R+V +W
Sbjct: 145 RWTAQMFLMFCLRRPDVWPVDDIGVQRGISRQFFEGEPIGPKEALQFGEKLKPWRTVAAW 204
Query: 259 YMWRLME 265
Y+WR ++
Sbjct: 205 YLWRSLD 211
>gi|28950140|emb|CAD70998.1| conserved hypothetical protein [Neurospora crassa]
Length = 408
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 81/247 (32%), Positives = 114/247 (46%), Gaps = 50/247 (20%)
Query: 69 VDIALRHLRDKDPLLATLIDAH-----RPPTFESSRSPFLSLAKSILYQQLAYKAAKSIY 123
++ A HL DP + LID H P PF SL SI+ QQ++ AAKSI
Sbjct: 155 LEKACAHLIAIDPRMKPLIDKHPCRVFSPEGLAEQIDPFESLVSSIISQQVSGAAAKSIK 214
Query: 124 TRFVALFNGEDNI----------------------------LPDAVLAVSPQQLREIGVS 155
+FVALF ED+ P +LA LR G+S
Sbjct: 215 AKFVALFEEEDDPPSDQEDGKEKKKTQENDPTPTPTKRRFPTPAHILAKDLPTLRTAGLS 274
Query: 156 YRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDV 215
RKA Y+ LA K+ G LS + + L +V+G+G W+V MF F+L + DV
Sbjct: 275 QRKAEYIHGLAAKFASGELSASLLASAPYEELVAKLVAVRGLGLWTVEMFACFALKRMDV 334
Query: 216 LPVGDLGVRKGLQVLYG--LKELPGA---------------LKMEEVCEKWKPYRSVGSW 258
+GDLGV++G+ G +K+L +M E+ E+++PYRS+ W
Sbjct: 335 FSLGDLGVQRGMAAFVGRDVKKLKNGGNGNGKDKKWKYMSEAEMREISERFRPYRSLFMW 394
Query: 259 YMWRLME 265
YMWR+ E
Sbjct: 395 YMWRVEE 401
>gi|160897949|ref|YP_001563531.1| HhH-GPD family protein [Delftia acidovorans SPH-1]
gi|160363533|gb|ABX35146.1| HhH-GPD family protein [Delftia acidovorans SPH-1]
Length = 269
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 66/196 (33%), Positives = 107/196 (54%), Gaps = 3/196 (1%)
Query: 72 ALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFN 131
A R L +D ++ LI + F +LA+SI+ QQ++ KAA++++ +F L
Sbjct: 74 ACRQLVRRDRVMKRLIPRFAHLALQPGGDAFATLARSIVGQQISMKAAQTLWNKFARL-- 131
Query: 132 GEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKML 191
+ PD VL + +R +G+S RK YL DLA +T+ L + M D + L
Sbjct: 132 -PARMAPDLVLKLKVDDMRAVGLSARKVDYLVDLAMHFTEHRLHQDDWQGMSDEAIVAEL 190
Query: 192 TSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKP 251
S++G+G W+ MF+IF L +P+VLP+ D G+ G+ Y + + EV E WKP
Sbjct: 191 MSIRGVGRWTAEMFLIFYLQRPNVLPLDDAGLISGISQNYFSGDPVSRSEAREVAEAWKP 250
Query: 252 YRSVGSWYMWRLMEAK 267
+ +V +WY+WR +E +
Sbjct: 251 WCTVATWYIWRSLEPQ 266
>gi|392397318|ref|YP_006433919.1| 3-methyladenine DNA glycosylase [Flexibacter litoralis DSM 6794]
gi|390528396|gb|AFM04126.1| 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase
[Flexibacter litoralis DSM 6794]
Length = 237
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 72/203 (35%), Positives = 119/203 (58%), Gaps = 16/203 (7%)
Query: 72 ALRHLRDKDPLLATLIDAHRPPTFE--------SSRSPFLSLAKSILYQQLAYKAAKSIY 123
A +HL KDPL ++++ TF+ S + SL K+I+ QQL+ KAA +IY
Sbjct: 31 AKKHL-SKDPLFIPVLESVEINTFKDLEDEGIKSEVNIMTSLIKAIVSQQLSVKAADTIY 89
Query: 124 TRFVALFNGEDNILPDA--VLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVE 181
RF+ LF+G + P+A +L + L+ +G+S +K +Y+R++A +S E I +
Sbjct: 90 KRFLGLFDG---VSPNATVLLETDIETLKSVGLSKQKITYIREVALFAQKNDISIEFINQ 146
Query: 182 MDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGAL- 240
+ + + LT +KG+G W+V M ++F+L +PDV PV DLG+++ +Q L +E L
Sbjct: 147 KSNEEVIEYLTQIKGVGRWTVEMLLMFTLWRPDVFPVADLGIQQAIQKLLKTEEKGKELI 206
Query: 241 -KMEEVCEKWKPYRSVGSWYMWR 262
+M EKWKPYR+ + Y+W+
Sbjct: 207 KRMIIYSEKWKPYRTFAAMYLWK 229
>gi|186476147|ref|YP_001857617.1| HhH-GPD family protein [Burkholderia phymatum STM815]
gi|184192606|gb|ACC70571.1| HhH-GPD family protein [Burkholderia phymatum STM815]
Length = 340
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 113/227 (49%), Gaps = 7/227 (3%)
Query: 39 KIAEIPVATAISTNSDNSPKIFKPLTFKGEVDIALRHLRDKDPLLATLIDAHRPPTFESS 98
+ A P +A + + + +P + D A L +D +L LI P S
Sbjct: 115 RAAVAPAESADAVQAAQPSGVTRPAYW----DKACADLVKRDRILKKLIPKFGPVHLSSR 170
Query: 99 RSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNILPDAVLAVSPQQLREIGVSYRK 158
PF++LA+S++ QQ++ +A++++ R VA + P ++ + L GVS RK
Sbjct: 171 ADPFVTLARSVIGQQISVASAQAMWQRIVAAC---PKLAPQQIIKLGQDDLMGCGVSKRK 227
Query: 159 ASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPV 218
A Y+ DLA + G L M+D + LT ++GI W+ MF+IF L +PDVLP+
Sbjct: 228 AEYILDLAHHFVSGALHVGKWTSMEDEDVIAELTQIRGISRWTAEMFLIFDLSRPDVLPL 287
Query: 219 GDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSWYMWRLME 265
D + + Y E + EV W+P+R+V +WYMWR ++
Sbjct: 288 DDPNLIHAISQNYFSGEPVTRSEAREVAANWEPWRTVATWYMWRSLD 334
>gi|168702731|ref|ZP_02735008.1| DNA-3-methyladenine glycosylase II [Gemmata obscuriglobus UQM 2246]
Length = 227
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 73/213 (34%), Positives = 110/213 (51%), Gaps = 19/213 (8%)
Query: 72 ALRHLRDKDPLLATLIDAHRPPTF-ESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALF 130
A HL P++ LI P PF L + ++ QQ++ KAA+SIY R
Sbjct: 9 AREHLSAACPVMNGLIGRVGPCLLMPRGEDPFTLLVRCVIGQQISTKAAESIYNRLARAV 68
Query: 131 N-----------------GEDNILP-DAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDG 172
N + I+P D + A+S + +E GVS K LR + E
Sbjct: 69 NPPPEGPHPADGTSLAMWQREGIMPMDKLAALSEAEFKECGVSGPKQRTLRAVVEHARAN 128
Query: 173 ILSDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYG 232
SI +DD T+ + LT +KGIG W+V M+++F L +PDVL VGD G++ ++ L+
Sbjct: 129 PDLLPSIAGLDDDTIRERLTVIKGIGPWTVDMYLLFGLGRPDVLSVGDYGIKVAVKNLFR 188
Query: 233 LKELPGALKMEEVCEKWKPYRSVGSWYMWRLME 265
L++LP K+ V + W+PYRSV WY+WR ++
Sbjct: 189 LRKLPDPAKLTRVAKPWQPYRSVALWYLWRSLD 221
>gi|389739943|gb|EIM81135.1| DNA glycosylase [Stereum hirsutum FP-91666 SS1]
Length = 508
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 74/183 (40%), Positives = 105/183 (57%), Gaps = 20/183 (10%)
Query: 63 LTFKGEVDIALRHLRDKDPLLATLIDAHRPPTFESSR--SPFLSLAKSILYQQLAYKAAK 120
LTF D A +HL ++D + FE PF +L SIL QQ+++ AA+
Sbjct: 101 LTF--SFDDAKKHLIEEDARFEDVFRRLPCKPFEKLERVEPFRTLTTSILGQQISWLAAR 158
Query: 121 SIYTRFVALFNGEDNILPDA--------VLAVSPQQ--------LREIGVSYRKASYLRD 164
SI RFV L+ + PDA L +P Q LR G+S RKA Y++D
Sbjct: 159 SINHRFVRLYFPDLPEKPDAEYWAKAPITLFPTPHQVAVTDLNTLRTAGLSGRKAEYVQD 218
Query: 165 LAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVR 224
LA ++ DG LS E + E DD ++++LT+V+GIG W+V MF IFSL +PD++P GDLGV+
Sbjct: 219 LAARFADGRLSAEKLFEADDEELYELLTAVRGIGRWTVDMFAIFSLRRPDIMPYGDLGVQ 278
Query: 225 KGL 227
+G+
Sbjct: 279 RGV 281
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 35/59 (59%), Gaps = 9/59 (15%)
Query: 213 PDVLPVGDLGVRKGLQVLYGLKELPGAL----KMEEVCEKWKPYRSVGSWYMWRLMEAK 267
P+ L VG L R L G K++ GA +MEE+ E WKPYRS+G +YMW L E K
Sbjct: 455 PEGLTVGGLKGR-----LDGKKKIKGAFLTPKEMEELTEGWKPYRSLGVYYMWALSEEK 508
>gi|221198381|ref|ZP_03571427.1| HhH-GPD family protein [Burkholderia multivorans CGD2M]
gi|221208942|ref|ZP_03581939.1| HhH-GPD family protein [Burkholderia multivorans CGD2]
gi|221171225|gb|EEE03675.1| HhH-GPD family protein [Burkholderia multivorans CGD2]
gi|221182313|gb|EEE14714.1| HhH-GPD family protein [Burkholderia multivorans CGD2M]
Length = 293
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 65/197 (32%), Positives = 106/197 (53%), Gaps = 3/197 (1%)
Query: 70 DIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVAL 129
D A L +D +L LI P F++LA+S++ QQ++ +A+S++ R A
Sbjct: 95 DKACADLVKRDRILKKLIPKFGPAHLVKRGDSFVTLARSVVGQQISVPSAQSLWARIQAA 154
Query: 130 FNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFK 189
+ P V+ + +L G+S RK Y+ DLA+ + G L + M+D +
Sbjct: 155 CP---KLAPQPVIRLGADKLIACGLSKRKTEYILDLAQHFVSGALHVDKWTSMEDEAVIA 211
Query: 190 MLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKW 249
LT ++GI W+ MF+IF+L +PDVLP+ D G+ + + V Y E + EV W
Sbjct: 212 ELTQIRGISRWTAEMFLIFNLSRPDVLPLDDPGLIRAISVNYFSGEPVTRSEAREVAANW 271
Query: 250 KPYRSVGSWYMWRLMEA 266
+P+R+V +WYMWR ++A
Sbjct: 272 EPWRTVATWYMWRSLDA 288
>gi|415923929|ref|ZP_11554819.1| DNA-3-methyladenine glycosylase II [Herbaspirillum frisingense
GSF30]
gi|407760438|gb|EKF69731.1| DNA-3-methyladenine glycosylase II [Herbaspirillum frisingense
GSF30]
Length = 219
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 58/164 (35%), Positives = 95/164 (57%), Gaps = 3/164 (1%)
Query: 102 FLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNILPDAVLAVSPQQLREIGVSYRKASY 161
F +LA+S++ QQ++ KAA +++ RF+ P V+ P+ L G+S RKA Y
Sbjct: 53 FTTLARSVIGQQISTKAANAVWQRFL---EACPRCTPGQVIRTGPEALAACGLSKRKAEY 109
Query: 162 LRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDL 221
+ DLA + + + EM+D + + ++GIG W+ MF+IF+L +P+VLP+ DL
Sbjct: 110 ILDLAAHFKAKTVHPDKWAEMEDEAVIAEMIQIRGIGRWTAEMFLIFNLLRPNVLPLDDL 169
Query: 222 GVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSWYMWRLME 265
G+ KG+ V Y E EV W+P+R+V +WY+WR ++
Sbjct: 170 GLLKGISVSYFSGEPVSRSDAREVAANWEPWRTVATWYLWRSLD 213
>gi|332665738|ref|YP_004448526.1| HhH-GPD family protein [Haliscomenobacter hydrossis DSM 1100]
gi|332334552|gb|AEE51653.1| HhH-GPD family protein [Haliscomenobacter hydrossis DSM 1100]
Length = 200
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 74/198 (37%), Positives = 117/198 (59%), Gaps = 11/198 (5%)
Query: 75 HLRDKDPLLATLIDAHRPPTFESSRSP-FLSLAKSILYQQLAYKAAKSIYTRFVALFNGE 133
HL +DP LA+++ P + + + + L +SI QQL+ KAA +I+ RF+A+F
Sbjct: 8 HL-SRDPKLASILPNIAFPDYGADNNDVYFGLLESIASQQLSVKAADTIFKRFLAIF--- 63
Query: 134 DNILPDAVLAV-SPQQ-LREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKML 191
P A L V +PQ+ LR +G+S +KA Y+R+ A + + L + D + K+L
Sbjct: 64 PTAYPAAELLVNTPQESLRAVGLSNQKAQYMRNTAAFFLEHQLFQKDWSGFSDDEVVKLL 123
Query: 192 TSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGAL---KMEEVCEK 248
+S+KG+G W+V M ++F L +PDV P+ DLGVR+ + LY + EL G K+ E+ E
Sbjct: 124 SSIKGVGKWTVEMILMFVLRRPDVFPIDDLGVRQAMIRLYEV-ELEGKAQYQKLTEIAEA 182
Query: 249 WKPYRSVGSWYMWRLMEA 266
W+PYR+ Y+WR +A
Sbjct: 183 WRPYRTYACRYLWRWKDA 200
>gi|289665301|ref|ZP_06486882.1| DNA-3-methyladenine glycosylase [Xanthomonas campestris pv.
vasculorum NCPPB 702]
Length = 224
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/203 (35%), Positives = 112/203 (55%), Gaps = 6/203 (2%)
Query: 68 EVDIALRHLRDKDPLLATLIDAHRP----PTFESSRSPFLSLAKSILYQQLAYKAAKSIY 123
+V+ A HL +D L + P P + P +LA++IL+QQL+ KAA +I
Sbjct: 9 DVEAAFAHLARRDRALGAWMKRIGPIAPQPGWRKPFDPVDALARAILFQQLSGKAASTIV 68
Query: 124 TRFVALFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDG-ILSDESIVEM 182
R V + G + D + + LR GVS KA LRDLA + + G I S + M
Sbjct: 69 AR-VEVAIGAQRLHADTLGRIDDAALRACGVSGNKALALRDLARRESAGEIPSLRRLAFM 127
Query: 183 DDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKM 242
DD + L V+GIG W+V M ++F L +PD+LP+ DLGVRKG Q + +++P ++
Sbjct: 128 DDNAIVDALVPVRGIGRWTVEMMLMFRLGRPDLLPIDDLGVRKGAQRVDKQEQMPTPKEL 187
Query: 243 EEVCEKWKPYRSVGSWYMWRLME 265
E+W PYR+ ++Y+W++ +
Sbjct: 188 AVRGERWGPYRTYAAFYLWQIAD 210
>gi|386332551|ref|YP_006028720.1| dna-3-methyladenine glycosylase protein [Ralstonia solanacearum
Po82]
gi|334194999|gb|AEG68184.1| dna-3-methyladenine glycosylase protein [Ralstonia solanacearum
Po82]
Length = 215
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 96/167 (57%), Gaps = 1/167 (0%)
Query: 98 SRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNILPDAVLAVSPQQLREIGVSYR 157
+R P+ +L ++I YQQL KA +I R +AL+ G P +L LR G S
Sbjct: 46 AREPYEALVRAIAYQQLHAKAGDAILGRLLALYPGTGFPSPGQLLDTDETALRGCGFSAT 105
Query: 158 KASYLRDLAEKYTDGIL-SDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVL 216
K + +R +A+ DG++ + + M D + + L +++G+G W+V M +I++L + D+L
Sbjct: 106 KLATIRGIAQASLDGVVPTRGEALAMPDEALIERLVTLRGVGRWTVEMLLIYTLERSDIL 165
Query: 217 PVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSWYMWRL 263
P D GVR+G + L L+ P +M E W+PYR++ +WY+WR+
Sbjct: 166 PADDFGVREGYRRLKRLEAAPTRRQMMETGRAWRPYRTIAAWYLWRM 212
>gi|289669201|ref|ZP_06490276.1| DNA-3-methyladenine glycosylase [Xanthomonas campestris pv.
musacearum NCPPB 4381]
Length = 224
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/203 (35%), Positives = 112/203 (55%), Gaps = 6/203 (2%)
Query: 68 EVDIALRHLRDKDPLLATLIDAHRP----PTFESSRSPFLSLAKSILYQQLAYKAAKSIY 123
+V+ A HL +D L + P P + P +LA++IL+QQL+ KAA +I
Sbjct: 9 DVEAAFAHLARRDRALGAWMKRIGPISPQPGWRKPFDPVDALARAILFQQLSGKAASTIV 68
Query: 124 TRFVALFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDG-ILSDESIVEM 182
R V + G + D + + LR GVS KA LRDLA + + G I S + M
Sbjct: 69 AR-VEVAIGAQRLHADTLGRIDDAALRACGVSGNKALALRDLARRESAGEIPSLRRLAFM 127
Query: 183 DDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKM 242
DD + L V+GIG W+V M ++F L +PD+LP+ DLGVRKG Q + +++P ++
Sbjct: 128 DDNAIVDALVPVRGIGRWTVEMMLMFRLGRPDLLPIDDLGVRKGAQRVDKQEQMPTPKEL 187
Query: 243 EEVCEKWKPYRSVGSWYMWRLME 265
E+W PYR+ ++Y+W++ +
Sbjct: 188 AVRGERWGPYRTYAAFYLWQIAD 210
>gi|421890884|ref|ZP_16321724.1| na-3-methyladenine glycosylase protein [Ralstonia solanacearum
K60-1]
gi|378963751|emb|CCF98472.1| na-3-methyladenine glycosylase protein [Ralstonia solanacearum
K60-1]
Length = 212
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 58/167 (34%), Positives = 95/167 (56%), Gaps = 1/167 (0%)
Query: 98 SRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNILPDAVLAVSPQQLREIGVSYR 157
+R P+ +L ++I YQQL KA +I R +AL+ G D P L LR G S
Sbjct: 43 AREPYEALVRAIAYQQLHAKAGDAILGRLLALYPGVDFPSPGQFLDTDETALRGCGFSAT 102
Query: 158 KASYLRDLAEKYTDGIL-SDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVL 216
K + +R +A+ DG++ + + M D + + L +++G+G W+V M +I++L + D+L
Sbjct: 103 KLATIRGIAQASLDGVVPTRGKALAMPDEALIERLVTLRGVGRWTVEMLLIYTLERSDIL 162
Query: 217 PVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSWYMWRL 263
P D GVR+G + L L+ P +M E W PYR++ +WY+WR+
Sbjct: 163 PADDFGVREGYRRLKRLEAAPTRRQMMETGRAWSPYRTIAAWYLWRM 209
>gi|256827461|ref|YP_003151420.1| 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase
[Cryptobacterium curtum DSM 15641]
gi|256583604|gb|ACU94738.1| 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase
[Cryptobacterium curtum DSM 15641]
Length = 234
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 65/192 (33%), Positives = 109/192 (56%), Gaps = 4/192 (2%)
Query: 70 DIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVAL 129
D A +L+ +DP LA IDA E F ++ I+ QQ++ A ++++ R L
Sbjct: 8 DEATEYLKSRDPQLACAIDAIGHVYREMDADLFSAVVHHIIGQQISTAAQQTVWLRMCDL 67
Query: 130 FNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFK 189
GE + ++ A SP+QL+ G+S+RK Y++D AEK DG ++I + D
Sbjct: 68 L-GE--VSAQSITATSPEQLQSCGISFRKVDYIQDFAEKVMDGSFDLDAIEQASDAEAIA 124
Query: 190 MLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKW 249
L+S++GIG W+ M ++F L +PDVL DL +++GL+++Y +++ L E+ ++
Sbjct: 125 ALSSLRGIGTWTAEMLLLFCLGRPDVLSFDDLAIQRGLRMVYHHRKITRPL-FEKYRRRY 183
Query: 250 KPYRSVGSWYMW 261
PY SV S Y+W
Sbjct: 184 SPYGSVASLYLW 195
>gi|326479118|gb|EGE03128.1| DNA-3-methyladenine glycosylase [Trichophyton equinum CBS 127.97]
Length = 367
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 84/240 (35%), Positives = 114/240 (47%), Gaps = 50/240 (20%)
Query: 72 ALRHLRDKDPLLATLIDAH-----RPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRF 126
A+ HL DP L +ID RP PF +L I+ QQ++ AAKSI ++F
Sbjct: 118 AIAHLLSVDPRLKPVIDKFPDAPFRPADLAVEIDPFQALVSGIIGQQVSGAAAKSIKSKF 177
Query: 127 VALF------------------NGEDNILPDAVLAV------SPQQ--------LREIGV 154
++LF +GED + DA L SPQQ LR G+
Sbjct: 178 ISLFSATTTPIDTQAETEAGDGDGEDEV-GDAGLRYKPVPFPSPQQVVSMDIPTLRTAGL 236
Query: 155 SYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPD 214
S RKA Y+ LAEK+ G LS ++ D + L +V+G+G WSV MF++F L + D
Sbjct: 237 SQRKAEYIHGLAEKFASGELSARMLLTASDEEVLDKLIAVRGLGKWSVEMFLLFGLKRMD 296
Query: 215 VLPVGDLGVRKGLQVLYG-----LKELPGA-------LKMEEVCEKWKPYRSVGSWYMWR 262
V GDLGV++G+ G LK G M E+ + PYRS+ WYMWR
Sbjct: 297 VFSTGDLGVQRGMAAFAGRDVSKLKAKGGGKFKYMSEKDMVEIAAPFSPYRSLFMWYMWR 356
>gi|294627055|ref|ZP_06705645.1| DNA-3-methyladenine glycosylase [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 11122]
gi|292598717|gb|EFF42864.1| DNA-3-methyladenine glycosylase [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 11122]
Length = 224
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 70/203 (34%), Positives = 114/203 (56%), Gaps = 6/203 (2%)
Query: 68 EVDIALRHLRDKDPLLATLIDAHRP----PTFESSRSPFLSLAKSILYQQLAYKAAKSIY 123
+V+ A H+ +D L + P P + P +LA++IL+QQL+ KAA +I
Sbjct: 9 DVEAAFAHVSRRDRALGAWMKRIGPIAPQPGWHKPFDPVDALARAILFQQLSGKAASTIV 68
Query: 124 TRFVALFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDG-ILSDESIVEM 182
R V + G + D + + LR GVS KA LRDLA + ++G I S + M
Sbjct: 69 AR-VEVAIGAQRLHADTLGRIDDAALRACGVSGNKALALRDLARRESEGEIPSLRRLAFM 127
Query: 183 DDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKM 242
D+ + + L V+GIG W+V M ++F L +PD+LP+ DLGVRKG Q + +++P ++
Sbjct: 128 DEEAIVQALVPVRGIGRWTVEMMLMFRLGRPDLLPIDDLGVRKGAQRVDRQEQMPTPREL 187
Query: 243 EEVCEKWKPYRSVGSWYMWRLME 265
E+W PYR+ ++Y+W++ +
Sbjct: 188 AVRGERWGPYRTYAAFYLWKIAD 210
>gi|424778294|ref|ZP_18205244.1| DNA-3-methyladenine glycosylase II [Alcaligenes sp. HPC1271]
gi|422886833|gb|EKU29245.1| DNA-3-methyladenine glycosylase II [Alcaligenes sp. HPC1271]
Length = 284
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 61/156 (39%), Positives = 94/156 (60%), Gaps = 2/156 (1%)
Query: 110 LYQQLAYKAAKSIYTRFVALFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKY 169
+YQQL +AA+ I R + ++ P+ VLA LR G+S KA+ + LA+
Sbjct: 1 MYQQLHTRAAERILQRLIDIYPHGHCPTPEEVLATPYDTLRACGLSGAKANSILGLAQAR 60
Query: 170 TDGILSDESI-VEMDDVTMFKMLTSVKGIGAWSVHMFMI-FSLHKPDVLPVGDLGVRKGL 227
DGI+ D++ ++M D + K LT+++GIG W+V M M+ ++L D+LP D GVR+G
Sbjct: 61 LDGIIPDQATALQMPDEELIKRLTTLRGIGRWTVEMMMMMYTLEHEDILPADDFGVREGY 120
Query: 228 QVLYGLKELPGALKMEEVCEKWKPYRSVGSWYMWRL 263
+ L L + P A + E+ + W PYRSV SWY+WR+
Sbjct: 121 RNLKQLDKAPSARVLREIGQAWAPYRSVASWYLWRM 156
>gi|346724121|ref|YP_004850790.1| DNA-3-methyladenine glycosylase [Xanthomonas axonopodis pv.
citrumelo F1]
gi|346648868|gb|AEO41492.1| DNA-3-methyladenine glycosylase [Xanthomonas axonopodis pv.
citrumelo F1]
Length = 224
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/210 (34%), Positives = 116/210 (55%), Gaps = 7/210 (3%)
Query: 62 PLTFKG-EVDIALRHLRDKDPLLATLIDAHRP----PTFESSRSPFLSLAKSILYQQLAY 116
P +G +V+ A H+ +D L + P P + P +LA++IL+QQL+
Sbjct: 2 PCHARGFDVEAAFAHVSRRDRALGAWMKRIGPIAPQPGWHKPFDPVDALARAILFQQLSG 61
Query: 117 KAAKSIYTRFVALFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDG-ILS 175
KAA +I R V + G + D + + LR GVS KA LRDLA + +G I S
Sbjct: 62 KAASTIVAR-VEVAIGAQRLHADTLDRIDDAALRACGVSGNKALALRDLARREREGEIPS 120
Query: 176 DESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKE 235
+ MD+ + + L V+GIG W+V M ++F L +PD+LP+ DLGVRKG Q + ++
Sbjct: 121 LRRLAFMDEDAIVQALVPVRGIGRWTVEMMLMFRLGRPDLLPIDDLGVRKGAQRVDKQEQ 180
Query: 236 LPGALKMEEVCEKWKPYRSVGSWYMWRLME 265
+P ++ E+W PYR+ ++Y+W++ +
Sbjct: 181 MPTPRELAARGERWGPYRTYAAFYLWKIAD 210
>gi|333915756|ref|YP_004489488.1| HhH-GPD family protein [Delftia sp. Cs1-4]
gi|333745956|gb|AEF91133.1| HhH-GPD family protein [Delftia sp. Cs1-4]
Length = 269
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 66/196 (33%), Positives = 107/196 (54%), Gaps = 3/196 (1%)
Query: 72 ALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFN 131
A R L +D ++ LI + F +LA+SI+ QQ++ KAA++++ +F L
Sbjct: 74 ACRQLVRRDRVMKRLIPRFAHLALQPGGDAFATLARSIVGQQISMKAAQTLWNKFARL-- 131
Query: 132 GEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKML 191
+ PD VL + +R +G+S RK YL DLA +T+ L + M D + L
Sbjct: 132 -PVRMAPDLVLKLKVDDMRAVGLSARKVDYLVDLAMHFTEHRLHQDDWQGMSDEAIVAEL 190
Query: 192 TSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKP 251
S++G+G W+ MF+IF L +P+VLP+ D G+ G+ Y + + EV E WKP
Sbjct: 191 MSIRGVGRWTAEMFLIFYLQRPNVLPLDDAGLISGISQNYFSGDPVSRSEAREVAEAWKP 250
Query: 252 YRSVGSWYMWRLMEAK 267
+ +V +WY+WR +E +
Sbjct: 251 WCTVATWYIWRSLEPQ 266
>gi|381170674|ref|ZP_09879829.1| HhH-GPD superbase excision DNA repair family protein [Xanthomonas
citri pv. mangiferaeindicae LMG 941]
gi|390991802|ref|ZP_10262057.1| hhH-GPD superbase excision DNA repair family protein [Xanthomonas
axonopodis pv. punicae str. LMG 859]
gi|418518318|ref|ZP_13084466.1| DNA-3-methyladenine glycosylase [Xanthomonas axonopodis pv.
malvacearum str. GSPB1386]
gi|418520739|ref|ZP_13086787.1| DNA-3-methyladenine glycosylase [Xanthomonas axonopodis pv.
malvacearum str. GSPB2388]
gi|372553477|emb|CCF69032.1| hhH-GPD superbase excision DNA repair family protein [Xanthomonas
axonopodis pv. punicae str. LMG 859]
gi|380688928|emb|CCG36316.1| HhH-GPD superbase excision DNA repair family protein [Xanthomonas
citri pv. mangiferaeindicae LMG 941]
gi|410703624|gb|EKQ62115.1| DNA-3-methyladenine glycosylase [Xanthomonas axonopodis pv.
malvacearum str. GSPB2388]
gi|410704011|gb|EKQ62497.1| DNA-3-methyladenine glycosylase [Xanthomonas axonopodis pv.
malvacearum str. GSPB1386]
Length = 224
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 70/203 (34%), Positives = 114/203 (56%), Gaps = 6/203 (2%)
Query: 68 EVDIALRHLRDKDPLLATLIDAHRP----PTFESSRSPFLSLAKSILYQQLAYKAAKSIY 123
+V+ A H+ +D L + P P + P +LA++IL+QQL+ KAA +I
Sbjct: 9 DVEAAFAHVSRRDRALGAWMKRIGPIAPQPGWHKPFDPVDALARAILFQQLSGKAASTIV 68
Query: 124 TRFVALFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDG-ILSDESIVEM 182
R V + G + D + + LR GVS KA LRDLA + ++G I S + M
Sbjct: 69 AR-VEVAIGAQRLHADTLGRIDDAALRACGVSGNKALALRDLARRESEGEIPSLRRLAFM 127
Query: 183 DDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKM 242
D+ + + L V+GIG W+V M ++F L +PD+LP+ DLGVRKG Q + +++P ++
Sbjct: 128 DEEAIVQALVPVRGIGRWTVEMMLMFRLGRPDLLPIDDLGVRKGAQRVDKQEQMPTPKEL 187
Query: 243 EEVCEKWKPYRSVGSWYMWRLME 265
E+W PYR+ ++Y+W++ +
Sbjct: 188 AVRGERWGPYRTYAAFYLWKIAD 210
>gi|440474100|gb|ELQ42867.1| DNA-3-methyladenine glycosylase [Magnaporthe oryzae Y34]
gi|440485926|gb|ELQ65842.1| DNA-3-methyladenine glycosylase [Magnaporthe oryzae P131]
Length = 467
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 82/240 (34%), Positives = 120/240 (50%), Gaps = 21/240 (8%)
Query: 37 ITKIAEIPVATAISTNSDNSPKIFKPLTFKGEVDIALRHLRDKDPLLATLIDAHR----- 91
+ + +P T S+ S I P T ++ A HL DP + LI+AH
Sbjct: 101 VVAASHLPAQTTSSSPSKAGIPIKGPTTTATLLEEACAHLIRVDPRMKPLIEAHHCHIFS 160
Query: 92 PPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFN----GEDNILPDAVLAVSPQ 147
P PF SL I+ QQ++ AA+SI +FVALF GE P +V A + +
Sbjct: 161 PEGLAEKIDPFESLCSGIISQQVSGAAARSIKAKFVALFADEKPGELFPSPSSVAAATIE 220
Query: 148 QLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMI 207
+LR G+S RKA Y++ LAEK+ G LS + ++ + + L +V+G+G WSV MF
Sbjct: 221 KLRTAGLSQRKAEYVKGLAEKFASGELSAQLFADLPYEQVLQKLIAVRGLGRWSVEMFAC 280
Query: 208 FSLHKPDVLPVGDLGVRKGLQVLYGL------KELPGALK------MEEVCEKWKPYRSV 255
F L DV +GDLGV++G+ G G K M E+ +++KPYRS+
Sbjct: 281 FGLKFMDVFSLGDLGVQRGMAAFSGRDVAKMKNSKAGKWKYMNEKDMTELSDRFKPYRSL 340
>gi|344167473|emb|CCA79702.1| na-3-methyladenine glycosylase protein [blood disease bacterium
R229]
Length = 212
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 59/168 (35%), Positives = 99/168 (58%), Gaps = 3/168 (1%)
Query: 98 SRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNILPDAVLAVSPQQLREIGVSYR 157
+R+P+ +L ++I YQQL +A +I R +AL+ G D P +L LR G S
Sbjct: 43 TRAPYEALVRAIAYQQLHARAGDAILGRLLALYPGVDFPSPGQLLDTGEATLRGCGFSAT 102
Query: 158 KASYLRDLAEKYTDGIL--SDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDV 215
K + +R LA+ DG++ DE++ M D + + L +++G+G W+V M +I++L + D+
Sbjct: 103 KLATIRGLAQATLDGVVPTRDEALA-MPDEALVERLVTLRGVGRWTVEMLLIYTLERADI 161
Query: 216 LPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSWYMWRL 263
LP D GVR+G + L L+ +M E+ W PYR++ +WY+WR+
Sbjct: 162 LPADDFGVREGYRRLKRLESALTRKQMIEIGRAWSPYRTIAAWYLWRM 209
>gi|384427016|ref|YP_005636374.1| DNA-3-methyladenine glycosylase [Xanthomonas campestris pv. raphani
756C]
gi|341936117|gb|AEL06256.1| DNA-3-methyladenine glycosylase [Xanthomonas campestris pv. raphani
756C]
Length = 224
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 73/203 (35%), Positives = 112/203 (55%), Gaps = 6/203 (2%)
Query: 68 EVDIALRHLRDKDPLLATLIDAHRP----PTFESSRSPFLSLAKSILYQQLAYKAAKSIY 123
+V++A HL D L + P P + P +LA++IL+QQL+ KAA +I
Sbjct: 9 DVEMAFTHLARSDRALGAWMRRIGPIAPQPGWRKPFDPVDALARAILFQQLSGKAAATIV 68
Query: 124 TRFVALFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDG-ILSDESIVEM 182
R V + G + D + V LR GVS KA LRDLA + G I S + M
Sbjct: 69 GR-VEVAIGASRLHADTLGRVDDAALRACGVSGNKALALRDLARREALGEIPSLRKLAFM 127
Query: 183 DDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKM 242
+D + + L V+GIG W+V M ++F L +PD+LP+ DLGVRKG Q + ++P ++
Sbjct: 128 EDDAIVEALVPVRGIGRWTVEMMLMFRLGRPDLLPIDDLGVRKGAQRVDKQAQMPTPKEL 187
Query: 243 EEVCEKWKPYRSVGSWYMWRLME 265
E E+W PYR+ ++Y+W++ +
Sbjct: 188 AERGERWGPYRTYAAFYLWKIAD 210
>gi|421895706|ref|ZP_16326106.1| dna-3-methyladenine glycosylase protein [Ralstonia solanacearum
MolK2]
gi|206586871|emb|CAQ17456.1| dna-3-methyladenine glycosylase protein [Ralstonia solanacearum
MolK2]
Length = 215
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 96/167 (57%), Gaps = 1/167 (0%)
Query: 98 SRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNILPDAVLAVSPQQLREIGVSYR 157
+R P+ +L ++I YQQL KA +I R +AL+ G D P +L LR G S
Sbjct: 46 AREPYEALVRAIAYQQLHAKAGDAILGRLLALYPGTDFPSPGQLLDTDETALRGCGFSAT 105
Query: 158 KASYLRDLAEKYTDGIL-SDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVL 216
K + +R +A+ DG++ + + M D + + L +++G+G W+V M +I++L + D+L
Sbjct: 106 KLATIRGIAQASLDGVVPTRGEALAMPDEALIEQLVTLRGVGRWTVEMLLIYTLERSDIL 165
Query: 217 PVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSWYMWRL 263
P D GVR+G + L L+ P +M E W+PYR + +W++WR+
Sbjct: 166 PADDFGVREGYRRLKRLEAAPTRQQMMETGRAWRPYRIIAAWHLWRM 212
>gi|392952371|ref|ZP_10317926.1| hypothetical protein WQQ_19980 [Hydrocarboniphaga effusa AP103]
gi|391861333|gb|EIT71861.1| hypothetical protein WQQ_19980 [Hydrocarboniphaga effusa AP103]
Length = 226
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/200 (36%), Positives = 110/200 (55%), Gaps = 9/200 (4%)
Query: 74 RHLRDKDPLLATLIDAHRPPTF-ESSRSPFLSLAKSILYQQLAYKAAKSIYTRFV-ALFN 131
RHL + ++ LI H T S R PF L SI+ QQL+ KAA +I R A+
Sbjct: 24 RHLSRRCAVMKRLIKTHGSCTIGRSRRDPFHVLCTSIISQQLSVKAADTIQARVATAVLA 83
Query: 132 G---EDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMF 188
G + +P + V LR G+S KA +L +A+K G S E + ++DD
Sbjct: 84 GAAEKGGFMPAHFIEVEFDLLRSAGLSTAKAKWLIAIAQKVHSGEFSFEKLRKLDDEAAI 143
Query: 189 KMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLY--GLKELPGALKMEEVC 246
+ L ++ GIG W+ M+++F+L + D+ + D+G+R G+ L+ G K L A + +
Sbjct: 144 EALDALPGIGRWTAEMYLMFALARRDLFALDDVGLRNGVNRLFNDGAK-LDDAATL-AIA 201
Query: 247 EKWKPYRSVGSWYMWRLMEA 266
E+W+PYRS+ SWY+WR MEA
Sbjct: 202 ERWRPYRSIASWYLWRAMEA 221
>gi|300690563|ref|YP_003751558.1| na-3-methyladenine glycosylase protein [Ralstonia solanacearum
PSI07]
gi|299077623|emb|CBJ50258.1| na-3-methyladenine glycosylase protein [Ralstonia solanacearum
PSI07]
Length = 212
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 59/168 (35%), Positives = 99/168 (58%), Gaps = 3/168 (1%)
Query: 98 SRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNILPDAVLAVSPQQLREIGVSYR 157
+R+P+ +L ++I YQQL +A +I R +AL+ G D P +L LR G S
Sbjct: 43 ARAPYEALVRAIAYQQLHARAGDAILGRLLALYPGVDFPSPGQLLDTGEATLRGCGFSAT 102
Query: 158 KASYLRDLAEKYTDGIL--SDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDV 215
K + +R LA+ DG++ DE++ M D + + L +++G+G W+V M +I++L + D+
Sbjct: 103 KLATIRGLAQATLDGVVPTRDEALA-MPDEALVERLVTLRGVGRWTVEMLLIYTLERADI 161
Query: 216 LPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSWYMWRL 263
LP D GVR+G + L L+ +M E+ W PYR++ +WY+WR+
Sbjct: 162 LPADDFGVREGYRRLKRLESALTRKQMIEIGRAWSPYRTIAAWYLWRM 209
>gi|326469895|gb|EGD93904.1| DNA-3-methyladenine glycosylase [Trichophyton tonsurans CBS 112818]
Length = 379
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 84/240 (35%), Positives = 114/240 (47%), Gaps = 50/240 (20%)
Query: 72 ALRHLRDKDPLLATLIDAH-----RPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRF 126
A+ HL DP L +ID RP PF +L I+ QQ++ AAKSI ++F
Sbjct: 130 AIAHLLSVDPRLKPVIDKFPDAPFRPADLAVEIDPFQALVSGIIGQQVSGAAAKSIKSKF 189
Query: 127 VALF------------------NGEDNILPDAVLAV------SPQQ--------LREIGV 154
++LF +GED + DA L SPQQ LR G+
Sbjct: 190 ISLFSATTTPIDTQAETEAGDGDGEDEV-GDAGLRYKPVPFPSPQQVVSMDIPTLRTAGL 248
Query: 155 SYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPD 214
S RKA Y+ LAEK+ G LS ++ D + L +V+G+G WSV MF++F L + D
Sbjct: 249 SQRKAEYIHGLAEKFASGELSARMLLTASDEEVLDKLIAVRGLGKWSVEMFLLFGLKRMD 308
Query: 215 VLPVGDLGVRKGLQVLYG-----LKELPGA-------LKMEEVCEKWKPYRSVGSWYMWR 262
V GDLGV++G+ G LK G M E+ + PYRS+ WYMWR
Sbjct: 309 VFSTGDLGVQRGMAAFAGRDVSKLKAKGGGKFKYMSEKDMVEIAAPFSPYRSLFMWYMWR 368
>gi|120610993|ref|YP_970671.1| HhH-GPD family protein [Acidovorax citrulli AAC00-1]
gi|120589457|gb|ABM32897.1| HhH-GPD family protein [Acidovorax citrulli AAC00-1]
Length = 219
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 72/202 (35%), Positives = 107/202 (52%), Gaps = 3/202 (1%)
Query: 61 KPLTFKGEVDIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAK 120
+P T G A RHL KD ++ LI + F +LA+SI+ QQ++ +A+
Sbjct: 12 EPSTAPGYWADACRHLVKKDRVMKRLIPQLGDVALVARGDAFTTLARSIVGQQVSVASAQ 71
Query: 121 SIYTRFVALFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIV 180
++ RF AL ++ P AVL + +R G+S RK YL DLA + G L +
Sbjct: 72 KVWDRFAAL---PRSMTPAAVLKLKVDDMRAAGLSARKVDYLVDLALHFDTGRLHVKDWD 128
Query: 181 EMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGAL 240
MDD + L +++GIG W+ MF+IF L +P+VLP+ D + +G+ Y +
Sbjct: 129 AMDDEAIAAELVAIRGIGRWTADMFLIFHLARPNVLPLDDATLLQGISQHYFSGDPVSRS 188
Query: 241 KMEEVCEKWKPYRSVGSWYMWR 262
EV E WKP+ SV SWY+WR
Sbjct: 189 DAREVAEAWKPWCSVASWYIWR 210
>gi|78046820|ref|YP_362995.1| DNA-3-methyladenine glycosylase [Xanthomonas campestris pv.
vesicatoria str. 85-10]
gi|78035250|emb|CAJ22895.1| DNA-3-methyladenine glycosylase [Xanthomonas campestris pv.
vesicatoria str. 85-10]
Length = 224
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 72/210 (34%), Positives = 116/210 (55%), Gaps = 7/210 (3%)
Query: 62 PLTFKG-EVDIALRHLRDKDPLLATLIDAHRP----PTFESSRSPFLSLAKSILYQQLAY 116
P +G +V+ A H+ +D L + P P + P +LA++IL+QQL+
Sbjct: 2 PCHARGFDVEAAFAHVSRRDRALGAWMKRIGPIAPQPGWHKPFDPVDALARAILFQQLSG 61
Query: 117 KAAKSIYTRFVALFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDG-ILS 175
KAA +I R V + G + D + + LR GVS KA LRDLA + +G I S
Sbjct: 62 KAASTIVAR-VEVAIGAQRLHADTLDRIDDAALRACGVSGNKALALRDLARREREGEIPS 120
Query: 176 DESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKE 235
+ MD+ + + L V+GIG W+V M ++F L +PD+LP+ DLGVRKG Q + ++
Sbjct: 121 LRRLAFMDEDAIVQALVPVRGIGRWTVEMMLMFRLGRPDLLPIDDLGVRKGAQRVDKQEQ 180
Query: 236 LPGALKMEEVCEKWKPYRSVGSWYMWRLME 265
+P ++ E+W PYR+ ++Y+W++ +
Sbjct: 181 MPTPSELAARGERWGPYRTYAAFYLWKIAD 210
>gi|17547288|ref|NP_520690.1| DNA-3-methyladenine glycosylase [Ralstonia solanacearum GMI1000]
gi|17429590|emb|CAD16276.1| probable dna-3-methyladenine glycosylase protein [Ralstonia
solanacearum GMI1000]
Length = 212
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 59/172 (34%), Positives = 99/172 (57%), Gaps = 3/172 (1%)
Query: 94 TFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNILPDAVLAVSPQQLREIG 153
T + +R P+ +L ++I YQQL +A +I R +A + G D P +L LR G
Sbjct: 39 TAKPARDPYEALVRAIAYQQLHARAGDAILGRLLARYPGVDFPSPRQLLETDEATLRGCG 98
Query: 154 VSYRKASYLRDLAEKYTDGIL--SDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLH 211
S K + +R +A+ D I+ DE++ + D + + L +++G+G W+V M +I++L
Sbjct: 99 FSATKLATIRGIAQATLDSIVPTRDEALA-LPDEALIERLVTLRGVGRWTVEMLLIYTLE 157
Query: 212 KPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSWYMWRL 263
+ D+LP D GVR+G + L L+ P +M E+ W PYR+V +WY+WR+
Sbjct: 158 RADILPADDFGVREGYRRLKRLETAPTRRQMAEIGRAWSPYRTVAAWYLWRM 209
>gi|294654316|ref|XP_456352.2| DEHA2A00418p [Debaryomyces hansenii CBS767]
gi|199428784|emb|CAG84297.2| DEHA2A00418p [Debaryomyces hansenii CBS767]
Length = 300
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 70/213 (32%), Positives = 116/213 (54%), Gaps = 31/213 (14%)
Query: 80 DPLLATLIDAHRPPT--FESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALF--NGEDN 135
DP L+ I + P + + + +L K I+ QQL+ AA+SI T+F+ LF GE
Sbjct: 76 DPALSDFIKSCDDPNTLMDVKMNAYQTLVKIIISQQLSTSAARSIMTKFIKLFLKEGEST 135
Query: 136 I------------LPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDG---ILSDESIV 180
P+ V SP++LR G+S+RKA YL ++EK++D + D+ +
Sbjct: 136 EPDHQFKAHPHFPTPEIVKETSPERLRSAGISFRKAGYLLIISEKFSDKNYLLNDDKKLN 195
Query: 181 EMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGAL 240
+M + + ++L +KGIG W+V +F++ + + D+ P+ D G+RKGL +L ++ G
Sbjct: 196 DMSNEDIARLLIDLKGIGPWAVDIFLLLYMKRSDIFPISDAGIRKGLSML--IQNTSGKK 253
Query: 241 ----------KMEEVCEKWKPYRSVGSWYMWRL 263
+ME+ E WKPYRSV SWY+ ++
Sbjct: 254 GKKLNYLSIEEMEKYSENWKPYRSVASWYLMKV 286
>gi|448738682|ref|ZP_21720703.1| HhH-GPD family protein [Halococcus thailandensis JCM 13552]
gi|445801068|gb|EMA51412.1| HhH-GPD family protein [Halococcus thailandensis JCM 13552]
Length = 194
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 103/188 (54%), Gaps = 3/188 (1%)
Query: 79 KDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNILP 138
+DP+L LI+ +++ PF L SI+ Q ++ +A ++ R F D I P
Sbjct: 10 EDPVLRALIEEFGEIEIDTAEDPFERLVVSIINQSISTASANAVRERVFERF---DEITP 66
Query: 139 DAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIG 198
VLA L + G+ K Y+R+ A + + L E + + D + L ++GIG
Sbjct: 67 ATVLAADADALSDAGLGEAKTEYVRNAARAFRERDLGREGLADASDEEVIDELGEIRGIG 126
Query: 199 AWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSW 258
W+ M++IF+L + DVLP+GDL VR+G++ LYG E +M E+ E+W+PYRS+ +
Sbjct: 127 EWTARMYLIFALGREDVLPLGDLAVRRGIESLYGDGEELTRAEMREIAERWRPYRSLATL 186
Query: 259 YMWRLMEA 266
Y+W E+
Sbjct: 187 YIWHHYES 194
>gi|367026065|ref|XP_003662317.1| hypothetical protein MYCTH_2302825 [Myceliophthora thermophila ATCC
42464]
gi|347009585|gb|AEO57072.1| hypothetical protein MYCTH_2302825 [Myceliophthora thermophila ATCC
42464]
Length = 420
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 79/256 (30%), Positives = 119/256 (46%), Gaps = 59/256 (23%)
Query: 69 VDIALRHLRDKDPLLATLIDAH-----RPPTFESSRSPFLSLAKSILYQQLAYKAAKSIY 123
++ A HL DP + LI+ H P PF SL SI+ QQ++ AAKSI
Sbjct: 157 LEEACAHLIKVDPRMKPLIEKHYCRIFSPEGLAEQIDPFESLCSSIISQQVSGAAAKSIK 216
Query: 124 TRFVALFNGEDNIL----------------------------------------PDAVLA 143
RF+ALFN +N PD V A
Sbjct: 217 ARFIALFNNSNNGGGSNDSSDNDNNNSHTAGAGADGVDGVDGVDGPAVAATFPSPDEVAA 276
Query: 144 VSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIGAWSVH 203
+ ++LR G+S RKA Y++ LA K+ G L+ + + + + + LT+V+G+G W+V
Sbjct: 277 MPLERLRTAGLSQRKAEYIQGLAAKFATGELTAQMLADAPYEEVLERLTAVRGLGRWTVE 336
Query: 204 MFMIFSLHKPDVLPVGDLGVRKGLQVLYG--------------LKELPGALKMEEVCEKW 249
MF F+L + DV GDLGV++G+ G + +MEE+ +++
Sbjct: 337 MFACFALKRMDVFSTGDLGVQRGMAAFVGRDVGRLKAKGGGGGKWKYMSEREMEEISDRF 396
Query: 250 KPYRSVGSWYMWRLME 265
+PYRS+ WYMWR+ E
Sbjct: 397 RPYRSLFMWYMWRVEE 412
>gi|392577334|gb|EIW70463.1| hypothetical protein TREMEDRAFT_71310 [Tremella mesenterica DSM
1558]
Length = 366
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 76/180 (42%), Positives = 105/180 (58%), Gaps = 11/180 (6%)
Query: 56 SPKIFKPLTFKGEVDIALRHLRDKDPLLATLIDAHRP-----PTFESSRSPFLSLAKSIL 110
SP + P T + A+ HL DP + H P P + ++ PF +L SI+
Sbjct: 14 SPSLLAP-TLPFSLQDAITHLSLADPRFGNMFQ-HLPCKPYIPPY-TAIDPFRTLVTSII 70
Query: 111 YQQLAYKAAKSIYTRFVALFNGED-NILPD--AVLAVSPQQLREIGVSYRKASYLRDLAE 167
QQ+++ AA++I RF ALF ED N P V A Q L+ +G+S RKA Y+ LAE
Sbjct: 71 GQQVSWMAARAINGRFRALFGYEDENGFPSPAQVAATEVQTLKGVGLSTRKAEYVISLAE 130
Query: 168 KYTDGILSDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGL 227
+ G LS E + + D + K L +V+GIG W+V MF++FSL +PDVLPVGDLGV+KGL
Sbjct: 131 HFLSGQLSTELLRDGSDDQIAKALIAVRGIGQWTVDMFLMFSLKRPDVLPVGDLGVQKGL 190
>gi|389774866|ref|ZP_10192985.1| HhH-GPD family protein [Rhodanobacter spathiphylli B39]
gi|388438465|gb|EIL95220.1| HhH-GPD family protein [Rhodanobacter spathiphylli B39]
Length = 220
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 65/195 (33%), Positives = 103/195 (52%), Gaps = 3/195 (1%)
Query: 72 ALRHLRDKDPLLATLIDAHRPPTFES--SRSPFLSLAKSILYQQLAYKAAKSIYTRFVAL 129
A +HL DP A L+ P E +R P+ +L +++ YQQL KA +I R + L
Sbjct: 11 ASKHLASIDPDWAQLVAQLGPCGHEPKPAREPYEALVRAVAYQQLHVKAGDAIVARLLTL 70
Query: 130 FNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVE-MDDVTMF 188
P +L S +R G S RK +R +A +G++ + + + D +
Sbjct: 71 HPRSAFPSPRQLLDASFDAMRACGFSARKIETIRGIAAATLEGVVPGLATAQALADDELI 130
Query: 189 KMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEK 248
L ++KGIG W+V MF+I+SL +PD+LP D GVR+G ++L L P M + +
Sbjct: 131 ARLGALKGIGRWTVEMFLIYSLARPDILPADDFGVREGYRLLKSLDAAPTPKAMALIGQA 190
Query: 249 WKPYRSVGSWYMWRL 263
W P+R+ +WY+WR+
Sbjct: 191 WSPHRTAAAWYLWRV 205
>gi|300311196|ref|YP_003775288.1| 3-methyladenine DNA glycosylase [Herbaspirillum seropedicae SmR1]
gi|300073981|gb|ADJ63380.1| 3-methyl-adenine DNA glycosylase II protein [Herbaspirillum
seropedicae SmR1]
Length = 219
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 57/164 (34%), Positives = 95/164 (57%), Gaps = 3/164 (1%)
Query: 102 FLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNILPDAVLAVSPQQLREIGVSYRKASY 161
F +LA+S++ QQ++ KAA +++ RF+ P V+ P+ L G+S RKA Y
Sbjct: 53 FTTLARSVIGQQISTKAANAVWQRFL---EACPRCTPGQVIRTGPEGLAGCGLSKRKAEY 109
Query: 162 LRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDL 221
+ DLA + + + EM+D + + ++GIG W+ MF+IF+L +P+VLP+ DL
Sbjct: 110 ILDLAAHFKAKTVHPDKWAEMEDEAVIAEMIQIRGIGRWTAEMFLIFNLLRPNVLPLDDL 169
Query: 222 GVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSWYMWRLME 265
G+ KG+ + Y E EV W+P+R+V +WY+WR ++
Sbjct: 170 GLLKGISISYFSGEPVSRSDAREVAANWEPWRTVATWYLWRSLD 213
>gi|296827142|ref|XP_002851122.1| DNA-3-methyladenine glycosylase [Arthroderma otae CBS 113480]
gi|238838676|gb|EEQ28338.1| DNA-3-methyladenine glycosylase [Arthroderma otae CBS 113480]
Length = 411
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 93/265 (35%), Positives = 125/265 (47%), Gaps = 49/265 (18%)
Query: 47 TAISTN-SDNSPK---IFKPLTFKGEV-DIALRHLRDKDPLLATLIDAH-----RPPTFE 96
TA +N +D SP + +P T G + A+ HL D L T+ID RP
Sbjct: 136 TAYPSNIADASPSKTGLPRPTTTVGNLLTDAIDHLLTVDGKLKTVIDKFPDAPFRPADLA 195
Query: 97 SSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFN----------GEDNILPD------- 139
PF +L I+ QQ++ AAKSI +F+ALFN ED D
Sbjct: 196 VEIDPFQALVSGIIGQQVSGAAAKSIKKKFIALFNPDSADESSKTKEDGGQGDHDDAGMR 255
Query: 140 --AVLAVSPQQ--------LREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFK 189
V SPQQ LR G+S RKA Y+ LAEK+ G LS ++ D + +
Sbjct: 256 YKPVAFPSPQQVVACDLPTLRTAGLSQRKAEYIHGLAEKFASGELSARMLLTASDEEVLE 315
Query: 190 MLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYG-----LKELPGA----- 239
L +V+G+G WSV MF++F L + DV GDLGV++G+ G LK G
Sbjct: 316 KLITVRGLGKWSVEMFLLFGLKRMDVFSTGDLGVQRGMAAYVGRDVSKLKAKGGGKFKYM 375
Query: 240 --LKMEEVCEKWKPYRSVGSWYMWR 262
M E+ + PYRS+ WYMWR
Sbjct: 376 SEKDMIEIAAPFSPYRSLFMWYMWR 400
>gi|442772057|gb|AGC72726.1| DNA-3-methyladenine glycosylase II [uncultured bacterium
A1Q1_fos_2111]
Length = 225
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 73/182 (40%), Positives = 101/182 (55%), Gaps = 9/182 (4%)
Query: 86 LIDAHRPPTFESSRSP-----FLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNILPDA 140
L+ + PPT R+P F SL SI QQ++ KAA SI+ R V + GED P
Sbjct: 27 LLSLYGPPTL--PRAPMRKDRFRSLVGSIAAQQVSGKAAASIFQRVVDIV-GED-FNPQR 82
Query: 141 VLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIGAW 200
+ V LR G+S KA+ + DLAE G + E++ MDD + ML V+GIG W
Sbjct: 83 AIDVGFDGLRSAGLSGSKAASVLDLAEHSLSGSVRLEALGSMDDHDVIDMLIQVRGIGVW 142
Query: 201 SVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSWYM 260
+ M +IF L + DV P GDLGVR G +GL+ P ++ + E++ PYRSV +W+
Sbjct: 143 TAQMVLIFDLRRIDVWPTGDLGVRVGFANAFGLETPPTPSELATLGEEFAPYRSVMAWWS 202
Query: 261 WR 262
WR
Sbjct: 203 WR 204
>gi|239825989|ref|YP_002948613.1| DNA-3-methyladenine glycosylase II [Geobacillus sp. WCH70]
gi|239806282|gb|ACS23347.1| DNA-3-methyladenine glycosylase II [Geobacillus sp. WCH70]
Length = 288
Score = 120 bits (302), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 101/169 (59%), Gaps = 5/169 (2%)
Query: 102 FLSLAKSILYQQLAYKAAKSIYTRFVALFNGE-DNIL----PDAVLAVSPQQLREIGVSY 156
+ L K +++QQL K A + RFV F + D + P+ + ++S +L+++ +S
Sbjct: 120 YFCLTKCLIHQQLNLKVAYRLTERFVKTFGTQIDGVWFYPRPEDIASLSYDELKQLQLSG 179
Query: 157 RKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVL 216
RKA Y+ D + DG LS E + ++ + + L S++GIG W+V F++F L KP+V
Sbjct: 180 RKAEYIIDTSRLIADGKLSLEELAHQNEEEVMEQLLSIRGIGPWTVQNFLLFGLGKPNVF 239
Query: 217 PVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSWYMWRLME 265
P D+G+++ +Q L GL + P +MEE+ ++W+PY S S Y+WR +E
Sbjct: 240 PKADIGLQRAIQRLLGLSQKPSIKQMEELSKRWEPYLSYASLYLWRSIE 288
>gi|456863456|gb|EMF81923.1| base excision DNA repair protein, HhH-GPD family [Leptospira weilii
serovar Topaz str. LT2116]
Length = 228
Score = 120 bits (302), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 61/186 (32%), Positives = 107/186 (57%), Gaps = 1/186 (0%)
Query: 76 LRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDN 135
LR KDP+ LID+ P ++ SP+ L KS+L QQL+ K A + R ++L +
Sbjct: 34 LRKKDPITKKLIDSIGPCKLQTIGSPYQVLIKSVLGQQLSVKVALTFERRLISLAGSKKI 93
Query: 136 ILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVK 195
PD +L + +L+EIGVS K ++ +AE Y + ++SD + + +D + +L S+K
Sbjct: 94 PSPDQILTIPNGKLKEIGVSQAKTETIKRIAEAYLNRVISDSKLRKSEDSDVLNLLCSLK 153
Query: 196 GIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSV 255
G+G W+ M +IF+L + D + DL +RK ++ YG+ + +++ + P+R++
Sbjct: 154 GVGPWTAEMVLIFALDRWDHFSINDLILRKSVEKHYGISK-DNKKEIQNFLMSYSPFRTI 212
Query: 256 GSWYMW 261
SWY+W
Sbjct: 213 LSWYLW 218
>gi|313126052|ref|YP_004036322.1| DNA-3-methyladenine glycosylase ii [Halogeometricum borinquense DSM
11551]
gi|448285891|ref|ZP_21477130.1| DNA-3-methyladenine glycosylase ii [Halogeometricum borinquense DSM
11551]
gi|312292417|gb|ADQ66877.1| DNA-3-methyladenine glycosylase II [Halogeometricum borinquense DSM
11551]
gi|445575921|gb|ELY30384.1| DNA-3-methyladenine glycosylase ii [Halogeometricum borinquense DSM
11551]
Length = 187
Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 62/187 (33%), Positives = 105/187 (56%), Gaps = 5/187 (2%)
Query: 79 KDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNILP 138
D LA L++ H E + F SI+ QQL+ ++A +I R F + P
Sbjct: 6 NDEQLAPLVEEHGELAIEPADDEFERFVVSIINQQLSTQSAAAIRERLFDRFE----VTP 61
Query: 139 DAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIG 198
+A+L LR++G+S +K SY++++A + L+ + ++ D + LT ++G+G
Sbjct: 62 EAMLNADETALRDVGLSSQKISYIQNVATAFQTDDLTRAGMADLTDEDVLMRLTEIRGVG 121
Query: 199 AWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSW 258
W+ M+++F L + DV PV DLG+RK + LY + E A+ M + E W+PYRSV S
Sbjct: 122 DWTAKMYLMFVLGREDVFPVEDLGIRKAMAELYRMDENDRAV-MVKRAEAWRPYRSVASR 180
Query: 259 YMWRLME 265
Y+WR+++
Sbjct: 181 YLWRVVD 187
>gi|351729460|ref|ZP_08947151.1| HhH-GPD family protein [Acidovorax radicis N35]
Length = 186
Score = 120 bits (301), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 63/164 (38%), Positives = 98/164 (59%), Gaps = 3/164 (1%)
Query: 102 FLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNILPDAVLAVSPQQLREIGVSYRKASY 161
F +LA+SI+ QQ++ KAA++++ RFVAL ++ P +VL + +R G+S RK Y
Sbjct: 20 FTTLARSIVGQQVSVKAAQTVWERFVAL---PRSMKPASVLKLKIDDMRAAGLSARKVDY 76
Query: 162 LRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDL 221
L DLA + +G L + MDD + L +++GIG W+ MF+IF L +P+VLP+ D
Sbjct: 77 LVDLAIHFEEGKLHVKDWAAMDDEAIIAELVAIRGIGRWTAEMFLIFYLMRPNVLPLDDP 136
Query: 222 GVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSWYMWRLME 265
G+ G+ Y + EV E WKP+ SV +WY+WR ++
Sbjct: 137 GLIAGISHNYFSGDPVSRSDAREVAEAWKPWSSVATWYIWRSLD 180
>gi|21241986|ref|NP_641568.1| DNA-3-methyladenine glycosylase [Xanthomonas axonopodis pv. citri
str. 306]
gi|21107382|gb|AAM36104.1| DNA-3-methyladenine glycosylase [Xanthomonas axonopodis pv. citri
str. 306]
Length = 215
Score = 120 bits (301), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 69/202 (34%), Positives = 113/202 (55%), Gaps = 6/202 (2%)
Query: 69 VDIALRHLRDKDPLLATLIDAHRP----PTFESSRSPFLSLAKSILYQQLAYKAAKSIYT 124
++ A H+ +D L + P P + P +LA++IL+QQL+ KAA +I
Sbjct: 1 MEAAFAHVSRRDRALGAWMKRIGPIAPQPGWHKPFDPVDALARAILFQQLSGKAASTIVA 60
Query: 125 RFVALFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDG-ILSDESIVEMD 183
R V + G + D + + LR GVS KA LRDLA + ++G I S + MD
Sbjct: 61 R-VEVAIGAQRLHADTLGRIDDAALRACGVSGNKALALRDLARRESEGEIPSLRRLAFMD 119
Query: 184 DVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKME 243
+ + + L V+GIG W+V M ++F L +PD+LP+ DLGVRKG Q + +++P ++
Sbjct: 120 EEAIVQALVPVRGIGRWTVEMMLMFRLGRPDLLPIDDLGVRKGAQRVDKQEQMPTPKELA 179
Query: 244 EVCEKWKPYRSVGSWYMWRLME 265
E+W PYR+ ++Y+W++ +
Sbjct: 180 VRGERWGPYRTYAAFYLWKIAD 201
>gi|303316542|ref|XP_003068273.1| HhH-GPD family base excision DNA repair protein [Coccidioides
posadasii C735 delta SOWgp]
gi|240107954|gb|EER26128.1| HhH-GPD family base excision DNA repair protein [Coccidioides
posadasii C735 delta SOWgp]
gi|320038045|gb|EFW19981.1| DNA-3-methyladenine glycosylase [Coccidioides posadasii str.
Silveira]
Length = 437
Score = 120 bits (301), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 85/271 (31%), Positives = 121/271 (44%), Gaps = 67/271 (24%)
Query: 59 IFKPLTFKGEV-DIALRHLRDKDPLLATLIDAHRPPTFESSR-----SPFLSLAKSILYQ 112
I +P G + + L HL DP L ++I+ + P F S PF +LA I+ Q
Sbjct: 156 IPRPTATTGNILEQGLAHLLKVDPKLRSVIEKYPSPPFSPSDLAEEIDPFQALASGIIGQ 215
Query: 113 QLAYKAAKSIYTRFVALF----------------------------------NGEDNI-- 136
Q++ AAKSI +FVALF N E +I
Sbjct: 216 QVSGAAAKSIKKKFVALFHKGLAVAGTTGALADATEVKSENAKQANDYDYGTNTEKSINE 275
Query: 137 -------------LPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMD 183
P+ V+ LR G+S RKA Y++ LAEK+ +G LS ++
Sbjct: 276 NDRKSEDGAVRFPTPEEVMKCDLATLRTAGLSQRKAEYIQGLAEKFVNGELSARMLLTAS 335
Query: 184 DVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYG-----LKELPG 238
D + + L +V+G+G WSV MF +F L + DV GDLGV++G+ G LK G
Sbjct: 336 DEDVLEKLIAVRGLGKWSVEMFSVFGLKRMDVFSTGDLGVQRGMAAFVGRDIAKLKAKGG 395
Query: 239 A-------LKMEEVCEKWKPYRSVGSWYMWR 262
+M E+ + PYRS+ WYMWR
Sbjct: 396 GKFKYMAEKEMLEIAAPFAPYRSLFMWYMWR 426
>gi|429220567|ref|YP_007182211.1| HhH-GPD superfamily base excision DNA repair protein [Deinococcus
peraridilitoris DSM 19664]
gi|429131430|gb|AFZ68445.1| HhH-GPD superfamily base excision DNA repair protein [Deinococcus
peraridilitoris DSM 19664]
Length = 207
Score = 120 bits (301), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 61/162 (37%), Positives = 100/162 (61%), Gaps = 9/162 (5%)
Query: 100 SPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNILPDAVLAVSPQQLREIGVSYRKA 159
+PF +L +S++ QQ++ KAA SI R L ++ P ++++SP++LR G+S+ K
Sbjct: 43 TPFAALIRSVVGQQVSVKAAASIEGR---LREVAPSLSPHELVSLSPEELRARGLSWAKV 99
Query: 160 SYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVG 219
+ LA++ +G+L E++ DD T+ + L++V GIG W+ MF++F+L +PDV G
Sbjct: 100 RTVHTLAQRAAEGLLDFEALSRSDDETVIEALSAVPGIGRWTAEMFLMFALRRPDVFSWG 159
Query: 220 DLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSWYMW 261
D G+RK ++ LYG P EV +KW PYRSV + +W
Sbjct: 160 DAGLRKAVRTLYGPASGP------EVAQKWSPYRSVAARLLW 195
>gi|392871388|gb|EAS33296.2| DNA-3-methyladenine glycosylase [Coccidioides immitis RS]
Length = 455
Score = 120 bits (301), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 85/271 (31%), Positives = 121/271 (44%), Gaps = 67/271 (24%)
Query: 59 IFKPLTFKGEV-DIALRHLRDKDPLLATLIDAHRPPTFESSR-----SPFLSLAKSILYQ 112
I +P G + + L HL DP L ++I+ + P F S PF +LA I+ Q
Sbjct: 174 IPRPTATTGNILEQGLAHLLKVDPKLRSVIEKYPSPPFSPSDLAEEIDPFQALASGIIGQ 233
Query: 113 QLAYKAAKSIYTRFVALF----------------------------------NGEDNI-- 136
Q++ AAKSI +FVALF N E +I
Sbjct: 234 QVSGAAAKSIKKKFVALFHKGLAVAGTTGALADATEVKSENAKQANDYDYGTNTEKSINE 293
Query: 137 -------------LPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMD 183
P+ V+ LR G+S RKA Y++ LAEK+ +G LS ++
Sbjct: 294 NDCKNEDGAVRFPTPEEVMKCDLATLRTAGLSQRKAEYIQGLAEKFVNGELSARMLLTAS 353
Query: 184 DVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYG-----LKELPG 238
D + + L +V+G+G WSV MF +F L + DV GDLGV++G+ G LK G
Sbjct: 354 DEDVLEKLIAVRGLGKWSVEMFSVFGLKRMDVFSTGDLGVQRGMAAFVGRDIAKLKAKGG 413
Query: 239 A-------LKMEEVCEKWKPYRSVGSWYMWR 262
+M E+ + PYRS+ WYMWR
Sbjct: 414 GKFKYMAEKEMLEIAAPFAPYRSLFMWYMWR 444
>gi|397904484|ref|ZP_10505395.1| DNA-3-methyladenine glycosylase II( EC:3.2.2.21 ) [Caloramator
australicus RC3]
gi|397162494|emb|CCJ32729.1| DNA-3-methyladenine glycosylase II [Caloramator australicus RC3]
Length = 206
Score = 120 bits (301), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 67/192 (34%), Positives = 113/192 (58%), Gaps = 3/192 (1%)
Query: 70 DIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVAL 129
D ++++ KD + LI+ + ++ F SL +SI+ QQL+ KAA++I+ R V +
Sbjct: 10 DPIVKYISIKDKRVKELIERVGEIQLDLGKNYFSSLVQSIVGQQLSMKAAETIWNRLVFI 69
Query: 130 FNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFK 189
+I D ++ + L+ IG+S K +Y++DLAEK +G ++ + I + D +
Sbjct: 70 LG---DINCDNIINAPFETLKSIGLSKSKIAYIKDLAEKVNEGAVNLDIIDSLSDEEIID 126
Query: 190 MLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKW 249
L VKGIG W+ MF+IFSL + DV + DLG++K +Q L+ L+ LP + + K+
Sbjct: 127 ELIKVKGIGKWTAEMFLIFSLGRMDVFSMNDLGLQKAVQWLFKLEGLPPKEFLLDFTSKF 186
Query: 250 KPYRSVGSWYMW 261
KPYR++ S Y+W
Sbjct: 187 KPYRTILSLYLW 198
>gi|213405197|ref|XP_002173370.1| DNA-3-methyladenine glycosylase [Schizosaccharomyces japonicus
yFS275]
gi|212001417|gb|EEB07077.1| DNA-3-methyladenine glycosylase [Schizosaccharomyces japonicus
yFS275]
Length = 224
Score = 120 bits (301), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 73/216 (33%), Positives = 113/216 (52%), Gaps = 8/216 (3%)
Query: 55 NSPKIFKPLT----FKGEVDIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSIL 110
N+ F PLT KGE IA + ++ + +P T +R P+ L ++
Sbjct: 3 NNVDQFHPLTQEDLIKGEKQIASLDEQHQELVRCVGQCTLKPQT---AREPYEGLIHALT 59
Query: 111 YQQLAYKAAKSIYTRFVALFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYT 170
YQ+L+ A +I R F+ + +L++ + LR G S+RK + +LA
Sbjct: 60 YQRLSDSAGDAILGRLCQHFHKKSFPSVQELLSLDTEDLRSFGFSHRKGETILELANMAA 119
Query: 171 DGIL-SDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQV 229
DG L S E I M M + T VKGIGAW+V + IF+L +P+V+P D +R+ +Q+
Sbjct: 120 DGSLPSREEISHMPLDKMIGIFTKVKGIGAWTVEKYAIFTLGRPNVMPTMDREIRENVQL 179
Query: 230 LYGLKELPGALKMEEVCEKWKPYRSVGSWYMWRLME 265
LY L P ++MEE + PY++V SWY+WR+ E
Sbjct: 180 LYHLDHTPTDVEMEERSRAYVPYKTVASWYLWRVPE 215
>gi|326317610|ref|YP_004235282.1| HhH-GPD family protein [Acidovorax avenae subsp. avenae ATCC 19860]
gi|323374446|gb|ADX46715.1| HhH-GPD family protein [Acidovorax avenae subsp. avenae ATCC 19860]
Length = 219
Score = 120 bits (300), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 71/202 (35%), Positives = 107/202 (52%), Gaps = 3/202 (1%)
Query: 61 KPLTFKGEVDIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAK 120
+P T G A RHL KD ++ LI + F +LA+SI+ QQ++ +A+
Sbjct: 12 EPSTAPGYWADACRHLVKKDRVMKRLIPQLGDVALVARGDAFTTLARSIVGQQVSVASAQ 71
Query: 121 SIYTRFVALFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIV 180
++ +F AL ++ P AVL + +R G+S RK YL DLA + G L +
Sbjct: 72 KVWDKFAALPR---SMTPAAVLKLKVDDMRAAGLSARKVDYLVDLALHFDTGRLHVKDWD 128
Query: 181 EMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGAL 240
MDD + L +++GIG W+ MF+IF L +P+VLP+ D + +G+ Y +
Sbjct: 129 AMDDEAIAAELVAIRGIGRWTADMFLIFHLARPNVLPLDDATLLQGISQHYFSGDPVSRS 188
Query: 241 KMEEVCEKWKPYRSVGSWYMWR 262
EV E WKP+ SV SWY+WR
Sbjct: 189 DAREVAEAWKPWCSVASWYIWR 210
>gi|335438322|ref|ZP_08561070.1| HhH-GPD family protein [Halorhabdus tiamatea SARL4B]
gi|334892516|gb|EGM30749.1| HhH-GPD family protein [Halorhabdus tiamatea SARL4B]
Length = 190
Score = 120 bits (300), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 70/190 (36%), Positives = 106/190 (55%), Gaps = 7/190 (3%)
Query: 76 LRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDN 135
LRD DP + L+ H T E +R PF L SI+ QQL+ +A +I R F E
Sbjct: 8 LRD-DPGIKPLVAEHGELTLEPARDPFERLVVSIVRQQLSIASADAIRERLFERFTVE-- 64
Query: 136 ILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVK 195
P ++ A S L ++G+S RKA +R++A + S + E D + LT +
Sbjct: 65 --PSSLRAPSIDALADVGLSERKAETIRNVAVAFEKRGYSRDYFAEHTDGEVVAELTEIT 122
Query: 196 GIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSV 255
GIG W+ MF+++ L + DV PV DLG+RKG+ ++ E+ A M E E+W+PYRS+
Sbjct: 123 GIGPWTAKMFLVYGLGREDVFPVEDLGIRKGMWAVFD-DEMDRA-AMVERAERWRPYRSI 180
Query: 256 GSWYMWRLME 265
S Y+WR+++
Sbjct: 181 ASLYLWRVVD 190
>gi|119188129|ref|XP_001244671.1| hypothetical protein CIMG_04112 [Coccidioides immitis RS]
Length = 437
Score = 120 bits (300), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 85/271 (31%), Positives = 121/271 (44%), Gaps = 67/271 (24%)
Query: 59 IFKPLTFKGEV-DIALRHLRDKDPLLATLIDAHRPPTFESSR-----SPFLSLAKSILYQ 112
I +P G + + L HL DP L ++I+ + P F S PF +LA I+ Q
Sbjct: 156 IPRPTATTGNILEQGLAHLLKVDPKLRSVIEKYPSPPFSPSDLAEEIDPFQALASGIIGQ 215
Query: 113 QLAYKAAKSIYTRFVALF----------------------------------NGEDNI-- 136
Q++ AAKSI +FVALF N E +I
Sbjct: 216 QVSGAAAKSIKKKFVALFHKGLAVAGTTGALADATEVKSENAKQANDYDYGTNTEKSINE 275
Query: 137 -------------LPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMD 183
P+ V+ LR G+S RKA Y++ LAEK+ +G LS ++
Sbjct: 276 NDCKNEDGAVRFPTPEEVMKCDLATLRTAGLSQRKAEYIQGLAEKFVNGELSARMLLTAS 335
Query: 184 DVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYG-----LKELPG 238
D + + L +V+G+G WSV MF +F L + DV GDLGV++G+ G LK G
Sbjct: 336 DEDVLEKLIAVRGLGKWSVEMFSVFGLKRMDVFSTGDLGVQRGMAAFVGRDIAKLKAKGG 395
Query: 239 A-------LKMEEVCEKWKPYRSVGSWYMWR 262
+M E+ + PYRS+ WYMWR
Sbjct: 396 GKFKYMAEKEMLEIAAPFAPYRSLFMWYMWR 426
>gi|171694385|ref|XP_001912117.1| hypothetical protein [Podospora anserina S mat+]
gi|170947141|emb|CAP73946.1| unnamed protein product [Podospora anserina S mat+]
Length = 428
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 78/222 (35%), Positives = 111/222 (50%), Gaps = 32/222 (14%)
Query: 69 VDIALRHLRDKDPLLATLIDAHR-----PPTFESSRSPFLSLAKSILYQQLAYKAAKSIY 123
++ A HL DP + LI+ H P PF SLA I+ QQ++ AAK+I
Sbjct: 210 LEEACAHLIKVDPRMKPLIEKHHCHIFSPEGLSEKIDPFESLASGIISQQVSGAAAKAIK 269
Query: 124 TRFVALF-NGEDNIL----------PDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDG 172
RF++LF G D P V+ S + LR G+S RKA YL LA+K+ G
Sbjct: 270 NRFISLFYPGNDTTTTTHEKKKFPTPADVIGKSIETLRTAGLSQRKAEYLLGLAQKFVSG 329
Query: 173 ILSDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYG 232
L+ + + + + + L +V+G+G WSV MF F L + DV GDLGV++G+ G
Sbjct: 330 ELTAQMLADAPYEEVLEKLIAVRGLGRWSVEMFACFGLKRMDVFSTGDLGVQRGMAAFVG 389
Query: 233 -----LKELPGALK--------MEEVCEKWKPYRSVGSWYMW 261
LK G K MEE+ E ++PYRS+ +MW
Sbjct: 390 RDVGKLKAKGGGNKWKYMSEREMEEIAEGFRPYRSL---FMW 428
>gi|115398273|ref|XP_001214728.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114192919|gb|EAU34619.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 395
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 74/207 (35%), Positives = 106/207 (51%), Gaps = 22/207 (10%)
Query: 69 VDIALRHLRDKDPLLATLIDAHRPPTFESSR-----SPFLSLAKSILYQQLAYKAAKSIY 123
++ A+ HL DP L +I + P F PF SL SI+ QQ++ AAKSI
Sbjct: 152 LEKAVAHLIATDPRLEPVIKQYPCPLFSPEGLAEEIDPFRSLVSSIIGQQVSGAAAKSIK 211
Query: 124 TRFVALFNGEDNIL-----PDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDES 178
+FVALFNG D + P+ ++ LR G+S RKA Y+ L++K+ G LS
Sbjct: 212 DKFVALFNGPDGGVAWFPTPEQIVQCDIATLRTAGLSQRKAEYIHGLSQKFASGELSARM 271
Query: 179 IVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYG-----L 233
++ D + + LT+V+G+G WSV MF F+L + DV GDLGV++G G L
Sbjct: 272 LLNASDEELLETLTAVRGLGRWSVEMFACFALKRIDVFSTGDLGVQRGCAAFMGKDVSKL 331
Query: 234 KELPGA-------LKMEEVCEKWKPYR 253
K G M E+ ++ PYR
Sbjct: 332 KAKGGGKFKYMAEKDMLELAARFAPYR 358
>gi|374620282|ref|ZP_09692816.1| 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase [gamma
proteobacterium HIMB55]
gi|374303509|gb|EHQ57693.1| 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase [gamma
proteobacterium HIMB55]
Length = 208
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 61/166 (36%), Positives = 99/166 (59%), Gaps = 2/166 (1%)
Query: 102 FLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNILPDAVLAVSPQQLREIGVSYRKASY 161
F +LA+ ++ QQ++ AA SI + V G + AVL S + LR G+S +K +Y
Sbjct: 43 FETLARIVVGQQVSVAAATSINKKLVDALEG--RLTATAVLDASEELLRSAGLSRQKVNY 100
Query: 162 LRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDL 221
++ LA G L + + E+ D ++T++KG G WS HM+++FSL +PD+ PVGDL
Sbjct: 101 IQSLATAEATGALVLDGLPELSDEDAVAVITNIKGFGEWSAHMYLMFSLGRPDIWPVGDL 160
Query: 222 GVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSWYMWRLMEAK 267
VR+G + + GL+E P A K++ + + ++PYRS + WR A+
Sbjct: 161 AVREGFKRIQGLEERPSAGKLKPMGDDFRPYRSALAMLCWRFCTAE 206
>gi|325284136|ref|YP_004256677.1| HhH-GPD family protein [Deinococcus proteolyticus MRP]
gi|324315945|gb|ADY27060.1| HhH-GPD family protein [Deinococcus proteolyticus MRP]
Length = 205
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 74/208 (35%), Positives = 107/208 (51%), Gaps = 14/208 (6%)
Query: 72 ALRHLRDKDPLLATLIDAHRP-PTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALF 130
AL HL +DP LA LID + P PF L +S++ QQL+ KAA+SIY R
Sbjct: 11 ALAHL-GRDPALAALIDQYGDLPVLAPVADPFARLIRSVVGQQLSVKAARSIYARLEERL 69
Query: 131 NGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKM 190
D +LA SP LR +G+S+ K + ++D+A +G + + D +
Sbjct: 70 GVVDAA---GLLATSPDDLRALGLSWAKVASVQDIARAAAEGQVDFAGLAGHTDEQLLAE 126
Query: 191 LTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWK 250
L ++G+G W+ MFM+F+L PDV GDL +RKGLQ + PG V + W
Sbjct: 127 LLPLRGVGRWTAEMFMMFALAHPDVFSFGDLALRKGLQ-----RHYPGQ-DHAVVVQGWS 180
Query: 251 PYRSVGSWYMWRLMEAKGVLPNVAKAAV 278
PYR++ + Y+W A P +A A V
Sbjct: 181 PYRTLAARYLWADQNAN---PGIAAAPV 205
>gi|300711140|ref|YP_003736954.1| HhH-GPD family protein [Halalkalicoccus jeotgali B3]
gi|299124823|gb|ADJ15162.1| HhH-GPD family protein [Halalkalicoccus jeotgali B3]
Length = 183
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 61/184 (33%), Positives = 100/184 (54%), Gaps = 2/184 (1%)
Query: 83 LATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNILPDAVL 142
+A LI+ + P F L S++ Q ++ AA ++ R LF+G I P+AVL
Sbjct: 1 MARLIEEYDPYAEPEWGEEFERLVVSVISQSISTAAASAVRERVYELFDG--PITPEAVL 58
Query: 143 AVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIGAWSV 202
A +L G + Y+ + AE + + L+ E + + D + + LT ++GIG W+
Sbjct: 59 ATDDDELAAAGFGTQNTEYVNNAAEAFLERDLTREGLADHTDREVIEELTRIRGIGEWTA 118
Query: 203 HMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSWYMWR 262
M+++F L + DVLP+GDL VR+G++ LY E +M E+ + W+PYRS G+ Y+W
Sbjct: 119 RMYLLFVLEREDVLPLGDLAVRRGIETLYNDGEELTREEMTEIAKAWRPYRSTGTKYVWA 178
Query: 263 LMEA 266
E
Sbjct: 179 AYEG 182
>gi|406985582|gb|EKE06329.1| DNA-3-methyladenine glycosylase II [uncultured bacterium]
Length = 189
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 69/192 (35%), Positives = 108/192 (56%), Gaps = 16/192 (8%)
Query: 79 KDPLLATLIDAHRPPTFESSRSP--FLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNI 136
KD + LI T + ++ F L +I QQL+ KAA +I+ R L I
Sbjct: 11 KDEYIGPLIKKWGSCTIKPTKKSLYFEDLVDAICSQQLSGKAALTIFGRVKKLLV---KI 67
Query: 137 LPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKG 196
+L +LRE G+S++K SY++DLA + + L +++ +++D + + L VKG
Sbjct: 68 TSAKILKTDDLKLRECGLSWQKVSYVKDLATQVENLKLKIKNLNKLEDNEVIEQLVQVKG 127
Query: 197 IGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEV-CEKWKPYRSV 255
IG W+ MF++FSL +PD+LP DLG+ K L+ LK++E EKWKP+R+V
Sbjct: 128 IGRWTAEMFLMFSLARPDILPTADLGINKALK----------NLKIKEKDTEKWKPHRTV 177
Query: 256 GSWYMWRLMEAK 267
SWY+WR +E +
Sbjct: 178 ASWYLWRSLENR 189
>gi|328858480|gb|EGG07592.1| hypothetical protein MELLADRAFT_43085 [Melampsora larici-populina
98AG31]
Length = 362
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 78/214 (36%), Positives = 117/214 (54%), Gaps = 26/214 (12%)
Query: 36 PITKIAEIPVATAISTNSDNSPKIFKPLTFKGEVDIALRHLRDKDPLLATLIDAHRPPTF 95
PIT +P +S++ D +P P +++ A HL D L ++ F
Sbjct: 52 PITPTETLP--KPLSSHQDTTPS--SPF----DLEDAKSHLIKVDRRFKLLFESLPCKPF 103
Query: 96 ESSR-----SPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGE-----DNI--------L 137
ESS+ PF SL KSIL QQ+++ AA+SI +FV LF E D++
Sbjct: 104 ESSQLNAKPEPFQSLCKSILGQQVSWLAARSITHKFVRLFFPELPEKADDLDPSDSSFPT 163
Query: 138 PDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGI 197
P V S ++LR G S RKA YL DL+ ++ +G LS E ++ M+ + + L +V+GI
Sbjct: 164 PSQVSTCSMERLRSAGASQRKAEYLLDLSNRFVNGQLSSEKLLAMNPDEIMEELCAVRGI 223
Query: 198 GAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLY 231
G W+V MF+IF++ P++LPV DLG++KGL Y
Sbjct: 224 GRWTVEMFLIFTVKHPNILPVSDLGIQKGLLRWY 257
>gi|332283465|ref|YP_004415376.1| DNA-3-methyladenine glycosylase [Pusillimonas sp. T7-7]
gi|330427418|gb|AEC18752.1| DNA-3-methyladenine glycosylase [Pusillimonas sp. T7-7]
Length = 216
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 108/200 (54%), Gaps = 2/200 (1%)
Query: 70 DIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVAL 129
D A L +D +L LI H S +PF++LA++++ Q++ KAA +++ RF
Sbjct: 17 DQASAELMARDRILKKLIPRHETEWLAPSATPFVTLARAVVGHQISVKAADAMWQRFTDA 76
Query: 130 FNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFK 189
P ++ ++ +++ G+S RKA Y+ DLA + + + + M D +
Sbjct: 77 CGRTPT--PQCIIKLAETGIQQSGLSKRKAEYILDLAVHFAEKKVRPAAWRTMTDEAVIA 134
Query: 190 MLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKW 249
L +++GIG W+ MF+IF+L +PDVLP+ D + K + + Y E + EV + W
Sbjct: 135 DLCAIRGIGRWTAEMFLIFNLQRPDVLPLDDASLLKAISLHYFSGEPVSRFEAREVAQAW 194
Query: 250 KPYRSVGSWYMWRLMEAKGV 269
P+R+V +WY+WR ++ V
Sbjct: 195 LPWRTVATWYLWRSLDPASV 214
>gi|15614312|ref|NP_242615.1| DNA-3-methyladenine glycosidase [Bacillus halodurans C-125]
gi|10174367|dbj|BAB05468.1| DNA-3-methyladenine glycosidase [Bacillus halodurans C-125]
Length = 221
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 65/163 (39%), Positives = 94/163 (57%), Gaps = 1/163 (0%)
Query: 100 SPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNILPDAVLAVSPQQLREIGVSYRKA 159
+PF SL SI+ QQL+ KAA +IY R L G P+ + VS + LR+ GVS RK
Sbjct: 38 NPFQSLVSSIVEQQLSIKAASAIYGRVEQLVGGALE-KPEQLYRVSDEALRQAGVSKRKI 96
Query: 160 SYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVG 219
Y+R + E G L + + T+ + LT++KGIG W+ MFM+FSL + DVL VG
Sbjct: 97 EYIRHVCEHVESGRLDFTELEGAEATTVIEKLTAIKGIGQWTAEMFMMFSLGRLDVLSVG 156
Query: 220 DLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSWYMWR 262
D+G+++G + LYG E G + + W PY +V Y+W+
Sbjct: 157 DVGLQRGAKWLYGNGEGDGKKLLIYHGKAWAPYETVACLYLWK 199
>gi|240280040|gb|EER43544.1| DNA-3-methyladenine glycosylase [Ajellomyces capsulatus H143]
Length = 399
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 76/232 (32%), Positives = 114/232 (49%), Gaps = 41/232 (17%)
Query: 69 VDIALRHLRDKDPLLATLIDAHRPPTFESSR-----SPFLSLAKSILYQQLAYKAAKSIY 123
++ A HL + P L +++ H P F + PF SL I+ QQ++ AA+SI
Sbjct: 156 LEEATAHLLNVAPQLRPVVEKHPCPLFSPAGLAEEIDPFNSLVSGIIGQQVSGAAARSIK 215
Query: 124 TRFVALFNG--------------------EDNILPDAVLAVSPQQLREIGVSYRKASYLR 163
+F+ALF G D I+ +A LR G+S RKA Y++
Sbjct: 216 KKFMALFRGGAEGGNGNYSNNIHNNNHNANDVIVAKCDIAT----LRSAGLSQRKAEYIQ 271
Query: 164 DLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGV 223
LAEK+ G LS + +++ D + + L +V+G+G WSV MF F L + DV GDLGV
Sbjct: 272 GLAEKFASGELSAQMLLQASDEEVLEKLIAVRGLGRWSVEMFSCFGLKRMDVFSTGDLGV 331
Query: 224 RKGLQVLYG-----LKELPGA-------LKMEEVCEKWKPYRSVGSWYMWRL 263
++G+ G LK G +M ++ + PYRS+ WYMWR+
Sbjct: 332 QRGMAAFMGRDVSKLKAKGGGKFKYMSEKEMVDIAAPFSPYRSLFMWYMWRI 383
>gi|338213451|ref|YP_004657506.1| HhH-GPD family protein [Runella slithyformis DSM 19594]
gi|336307272|gb|AEI50374.1| HhH-GPD family protein [Runella slithyformis DSM 19594]
Length = 200
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 65/197 (32%), Positives = 119/197 (60%), Gaps = 8/197 (4%)
Query: 71 IALRHLRDKDPLLATLIDAHRPPTFES---SRSPFLSLAKSILYQQLAYKAAKSIYTRFV 127
IA +L D ++A++I+ P F+ + +L+L +SI+ QQ++ KAA SI+TRF
Sbjct: 2 IAETYLASNDAIMASIIET--TPMFKKVDWNHDVYLALLESIVSQQISVKAADSIFTRFR 59
Query: 128 ALFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTM 187
ALF+ + P+++L+ + ++LR G+S +K YL+++A + + E + ++ D +
Sbjct: 60 ALFD-DAYPHPESLLSKTAEELRSAGLSLQKIKYLQNVALFAIENGIDYEKLQKLTDEEI 118
Query: 188 FKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGAL--KMEEV 245
+ L +KG+G W+V M ++F + +PDV P+ DL +R+ + Y L E AL ++ +
Sbjct: 119 VRYLIPIKGVGRWTVEMLLMFVMDRPDVFPIDDLVIRQKMVRAYNLTETGRALYKELHVI 178
Query: 246 CEKWKPYRSVGSWYMWR 262
E W+PYR++ Y+WR
Sbjct: 179 AENWRPYRTMACHYLWR 195
>gi|118577030|ref|YP_876773.1| 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase
[Cenarchaeum symbiosum A]
gi|118195551|gb|ABK78469.1| 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase
[Cenarchaeum symbiosum A]
Length = 187
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 64/180 (35%), Positives = 100/180 (55%), Gaps = 4/180 (2%)
Query: 83 LATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNILPDAVL 142
L L+ + P +R+ +L +SI+ QQL+ AA SI RF AL+ G P V
Sbjct: 4 LIRLVGEYNP---RRTRNRHEALVRSIITQQLSGSAASSILARFRALYGG-GFPRPADVA 59
Query: 143 AVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIGAWSV 202
++L++ G+S KA Y+R L+ L M D + L V+G+G W+
Sbjct: 60 RTPARKLQQAGISAMKADYIRGLSGMIDRRELKLAGFSRMGDEEVVAELVRVRGVGRWTA 119
Query: 203 HMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSWYMWR 262
MF+IF+L + DVLP+GDLG+RKG+ L + LP ++ + E+W+PYR+ +WY+W+
Sbjct: 120 EMFLIFALGRQDVLPLGDLGLRKGVMKLCSMDSLPTDAEIVKTAERWRPYRTAATWYLWK 179
>gi|170701541|ref|ZP_02892491.1| HhH-GPD family protein [Burkholderia ambifaria IOP40-10]
gi|170133535|gb|EDT01913.1| HhH-GPD family protein [Burkholderia ambifaria IOP40-10]
Length = 172
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 98/166 (59%), Gaps = 3/166 (1%)
Query: 101 PFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNILPDAVLAVSPQQLREIGVSYRKAS 160
PF++LA+S++ QQ++ +A++++ R + + + P V+ + +L G+S RK
Sbjct: 6 PFVTLARSVVGQQISVPSAQALWAR---IEDACPKLAPQPVIRLGADKLIACGLSKRKTE 62
Query: 161 YLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGD 220
Y+ DLA+ + G L + MDD + LT ++GI W+ MF+IF+L +PDVLP+ D
Sbjct: 63 YILDLAQHFVSGALHVDKWTSMDDEDVIAELTQIRGISRWTAEMFLIFNLSRPDVLPLDD 122
Query: 221 LGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSWYMWRLMEA 266
G+ + + V Y E + EV W+P+R+V +WYMWR ++A
Sbjct: 123 PGLIRAISVNYFSGEPVTRSEAREVAANWEPWRTVATWYMWRSLDA 168
>gi|358055905|dbj|GAA98250.1| hypothetical protein E5Q_04933 [Mixia osmundae IAM 14324]
Length = 407
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 74/202 (36%), Positives = 113/202 (55%), Gaps = 17/202 (8%)
Query: 41 AEIPVATAISTNSDNSPKIFK-PLTFKGEVDIALRHLRDKDPLLATLIDAHRPPTFE--- 96
A +P+ + +SD++ I + PL+F A HL DP L+D+ FE
Sbjct: 56 ALLPLPQGTTHDSDSAQTIAREPLSFS--YSAAREHLIAADPRFGHLMDSLPCKPFEMPE 113
Query: 97 SSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNILPD-----------AVLAVS 145
+ SPF SL SIL QQ+++ AA+SI RF+ L+ + PD V + S
Sbjct: 114 ETVSPFRSLCSSILGQQISWLAARSIKYRFIRLWFPDLPEKPDYSIVEPFPTPFQVASAS 173
Query: 146 PQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIGAWSVHMF 205
Q LR G+S RKA Y++DLA K+ +G L +++++M D + + L V+GIG W+V M
Sbjct: 174 VQHLRSAGLSQRKAEYIQDLASKFVEGWLDAKAMLKMSDEEVMEHLIKVRGIGRWTVEMA 233
Query: 206 MIFSLHKPDVLPVGDLGVRKGL 227
+IF +PD++P GDLGV+K +
Sbjct: 234 LIFVFLRPDIMPSGDLGVQKAM 255
Score = 42.4 bits (98), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 33/61 (54%), Gaps = 6/61 (9%)
Query: 213 PDVLPVGDLGVRKGLQVLYGLKELPGAL-----KMEEVCEKWKPYRSVGSWYMWRLMEAK 267
P + P + R LQ + K+L G + +MEE+ + W+PYRS+ WY+W L + +
Sbjct: 345 PPLPPSKTIASRAVLQARFN-KKLKGNIYLSPEEMEELSQSWRPYRSIAVWYLWSLSDGE 403
Query: 268 G 268
Sbjct: 404 N 404
>gi|327294663|ref|XP_003232027.1| DNA-3-methyladenine glycosylase [Trichophyton rubrum CBS 118892]
gi|326465972|gb|EGD91425.1| DNA-3-methyladenine glycosylase [Trichophyton rubrum CBS 118892]
Length = 366
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 82/238 (34%), Positives = 114/238 (47%), Gaps = 48/238 (20%)
Query: 72 ALRHLRDKDPLLATLIDAH-----RPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRF 126
A+ HL DP L +I+ RP PF +L I+ QQ++ AAKSI ++F
Sbjct: 119 AIAHLLSVDPRLKPVINKFPDAPFRPADLAVEIDPFQALVSGIIGQQVSGAAAKSIKSKF 178
Query: 127 VALF----------------NGEDNILPDAVLAV------SPQQ--------LREIGVSY 156
++LF +GED + DA L SPQQ LR G+S
Sbjct: 179 ISLFSATTTTTTDTQVEADGDGEDEV-GDAGLRYKPVPFPSPQQVVSMDIPTLRTAGLSQ 237
Query: 157 RKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVL 216
RKA Y+ LA+K+ G LS ++ D + L +V+G+G WSV MF++F L + DV
Sbjct: 238 RKAEYIHGLADKFASGELSARMLLTASDEEVLDKLIAVRGLGKWSVEMFLLFGLKRMDVF 297
Query: 217 PVGDLGVRKGLQVLYG-----LKELPGA-------LKMEEVCEKWKPYRSVGSWYMWR 262
GDLGV++G+ G LK G M E+ + PYRS+ WYMWR
Sbjct: 298 STGDLGVQRGMAAFAGRDVSKLKAKGGGKFKYMSEKDMIEIAAPFSPYRSLFMWYMWR 355
>gi|448321445|ref|ZP_21510922.1| HhH-GPD family protein [Natronococcus amylolyticus DSM 10524]
gi|445603280|gb|ELY57244.1| HhH-GPD family protein [Natronococcus amylolyticus DSM 10524]
Length = 183
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 64/187 (34%), Positives = 107/187 (57%), Gaps = 6/187 (3%)
Query: 83 LATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNILPDAVL 142
+A +++ H P E + + L SI+ QQ++ +A +I R + GE + P+ VL
Sbjct: 1 MAEIVERH-DPYEEPDWTEYERLCISIINQQVSTASAAAIRERVFDVLGGE--VTPETVL 57
Query: 143 AVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIGAWSV 202
A L E G+S K Y+R+ AE + + + + + + +LT +KGIG W+
Sbjct: 58 AADEDALYEAGLSRSKIEYVRNAAEAFRANDYTRSGLADHTNEEVIDVLTEIKGIGDWTA 117
Query: 203 HMFMIFSLHKPDVLPVGDLGVRKGLQVLYG--LKELPGALKMEEVCEKWKPYRSVGSWYM 260
M+++F L +PD+LP+GDL VR+G++ LY +EL A +M E+ E W+P+RSV + Y+
Sbjct: 118 RMYLLFVLERPDILPLGDLAVRRGIENLYADDGEELTRA-EMREIAETWRPHRSVATRYI 176
Query: 261 WRLMEAK 267
W EA+
Sbjct: 177 WAEYEAE 183
>gi|405119666|gb|AFR94438.1| DNA-3-methyladenine glycosidase [Cryptococcus neoformans var.
grubii H99]
Length = 445
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 82/225 (36%), Positives = 118/225 (52%), Gaps = 11/225 (4%)
Query: 9 DNISQNPSASSKITFPPRKIRKLTTITPITKIAEIPVATAISTNSDNSPKIFKPLTFKGE 68
D+ + +PSA P +K +K+ + I P +TA+ + P + P T
Sbjct: 24 DSGALSPSAGKDHLKPSKKKQKVEPCS----IDAQPPSTALELPTVPQPALLSP-TLNFN 78
Query: 69 VDIALRHLRDKDPLLATLID--AHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRF 126
+ A+ HL DP + + RP + PF +L SI+ QQ+++ AAK+I TRF
Sbjct: 79 LPSAISHLSALDPRFSLFFEHLPCRPFVNLEAIDPFRTLVTSIIGQQVSWMAAKAINTRF 138
Query: 127 VALFN----GEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEM 182
ALF E P VL LR G+S RKA Y+ LA+ + G LS + +
Sbjct: 139 RALFGFTHEKEGFPSPQMVLMQDVASLRGAGLSGRKAEYVLSLADHFASGQLSTQLLQSG 198
Query: 183 DDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGL 227
D + K L +V+GIG W++ MFMIFSL +PD+L VGDLGV+KGL
Sbjct: 199 TDEEISKALIAVRGIGQWTIDMFMIFSLRRPDILAVGDLGVQKGL 243
>gi|21230589|ref|NP_636506.1| DNA-3-methyladenine glycosylase [Xanthomonas campestris pv.
campestris str. ATCC 33913]
gi|66769416|ref|YP_244178.1| DNA-3-methyladenine glycosylase [Xanthomonas campestris pv.
campestris str. 8004]
gi|188992603|ref|YP_001904613.1| DNA-3-methyladenine glycosylase [Xanthomonas campestris pv.
campestris str. B100]
gi|21112168|gb|AAM40430.1| DNA-3-methyladenine glycosylase [Xanthomonas campestris pv.
campestris str. ATCC 33913]
gi|66574748|gb|AAY50158.1| DNA-3-methyladenine glycosylase [Xanthomonas campestris pv.
campestris str. 8004]
gi|167734363|emb|CAP52573.1| DNA-3-methyladenine glycosylase, probable [Xanthomonas campestris
pv. campestris]
Length = 213
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 72/200 (36%), Positives = 109/200 (54%), Gaps = 6/200 (3%)
Query: 71 IALRHLRDKDPLLATLIDAHRP----PTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRF 126
+A HL D L + P P + P +LA++IL+QQL+ KAA +I R
Sbjct: 1 MAFTHLARSDRALGAWMRRIGPIAPQPGWRKPFDPVDALARAILFQQLSGKAAATIVGR- 59
Query: 127 VALFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDG-ILSDESIVEMDDV 185
V + G + D + V LR GVS KA LRDLA + G I S + M+D
Sbjct: 60 VEVAIGASRLHADTLGRVDDAALRACGVSGNKALALRDLARREALGEIPSLRKLAFMEDD 119
Query: 186 TMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEV 245
+ + L V+GIG W+V M ++F L +PD+LP+ DLGVRKG Q + ++P ++ E
Sbjct: 120 AIVEALVPVRGIGRWTVEMMLMFRLGRPDLLPIDDLGVRKGAQRVDKQAQMPTPKELAER 179
Query: 246 CEKWKPYRSVGSWYMWRLME 265
E+W PYR+ ++Y+W++ +
Sbjct: 180 GERWGPYRTYAAFYLWKIAD 199
>gi|319787735|ref|YP_004147210.1| HhH-GPD family protein [Pseudoxanthomonas suwonensis 11-1]
gi|317466247|gb|ADV27979.1| HhH-GPD family protein [Pseudoxanthomonas suwonensis 11-1]
Length = 226
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 76/206 (36%), Positives = 107/206 (51%), Gaps = 6/206 (2%)
Query: 68 EVDIALRHLRDKDPLLATLIDAHRP----PTFESSRSPFLSLAKSILYQQLAYKAAKSIY 123
+V A HL +D L + + P + SS P +LA++ILYQQL+ KAA +I
Sbjct: 9 DVQAAWDHLVRRDRRLGSWMRRIGPLPPEAGWRSSFDPVDALARAILYQQLSGKAASTIV 68
Query: 124 TRFVALFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDG-ILSDESIVEM 182
R A G + D + V LR GVS K LRDLA + G I + M
Sbjct: 69 GRVEAAI-GSKRLHHDTLSRVDDATLRACGVSGNKTLALRDLAAREARGEIPGLRRMSYM 127
Query: 183 DDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKM 242
D + + L ++GIG W+V M ++F L +PDVLPV DLGVR+G Q++ GL+ P +
Sbjct: 128 DPDQIVEALVPIRGIGRWTVEMMLMFRLGRPDVLPVDDLGVRRGAQLVDGLEVPPTPTVL 187
Query: 243 EEVCEKWKPYRSVGSWYMWRLMEAKG 268
W PYR+ S Y+WR+ + G
Sbjct: 188 AARGHAWGPYRTYASLYLWRIADGAG 213
>gi|325927247|ref|ZP_08188504.1| 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase
[Xanthomonas perforans 91-118]
gi|325542367|gb|EGD13852.1| 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase
[Xanthomonas perforans 91-118]
Length = 224
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 64/174 (36%), Positives = 102/174 (58%), Gaps = 2/174 (1%)
Query: 93 PTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNILPDAVLAVSPQQLREI 152
P + P +LA++IL+QQL+ KAA +I R V + G + D + + LR
Sbjct: 38 PGWHKPFDPVDALARAILFQQLSGKAASTIVAR-VEVAIGAQRLHADTLGRIDDAALRAC 96
Query: 153 GVSYRKASYLRDLAEKYTDG-ILSDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLH 211
GVS KA LRDLA + +G I S + MD+ + + L V+GIG W+V M ++F L
Sbjct: 97 GVSGNKALALRDLARREREGEIPSLRRLAFMDEDAIVQALVPVRGIGRWTVEMMLMFRLG 156
Query: 212 KPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSWYMWRLME 265
+PD+LP+ DLGVRKG Q + +++P ++ E+W PYR+ ++Y+W++ +
Sbjct: 157 RPDLLPIDDLGVRKGAQRVDKQEQMPTPRELAARGERWGPYRTYAAFYLWKIAD 210
>gi|253574190|ref|ZP_04851532.1| DNA-3-methyladenine glycosidase [Paenibacillus sp. oral taxon 786
str. D14]
gi|251846667|gb|EES74673.1| DNA-3-methyladenine glycosidase [Paenibacillus sp. oral taxon 786
str. D14]
Length = 228
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 63/160 (39%), Positives = 97/160 (60%), Gaps = 3/160 (1%)
Query: 102 FLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNILPDAVLAVSPQQLREIGVSYRKASY 161
F LA+SI+ QQ++ KAA +I R + L GE + P A+LA S LR G+S K +Y
Sbjct: 46 FTELARSIISQQISVKAASTIRGRVIEL-AGE--LSPAALLAQSDADLRAAGLSASKVAY 102
Query: 162 LRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDL 221
L+DL++K G L + + E+DD + K L SVKGIG WS MF+IF+L + V+ GD
Sbjct: 103 LKDLSDKVQSGQLDLDRLQELDDEEVIKQLVSVKGIGRWSAEMFLIFALGREHVVSYGDA 162
Query: 222 GVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSWYMW 261
G+++ + +Y ++E P +++ +W Y S+ S Y+W
Sbjct: 163 GLQRAAKWVYDMEERPDRKYLQQAAAQWPSYGSIASLYLW 202
>gi|294666928|ref|ZP_06732158.1| DNA-3-methyladenine glycosylase [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
gi|292603300|gb|EFF46721.1| DNA-3-methyladenine glycosylase [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
Length = 224
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/203 (33%), Positives = 113/203 (55%), Gaps = 6/203 (2%)
Query: 68 EVDIALRHLRDKDPLLATLIDAHRP----PTFESSRSPFLSLAKSILYQQLAYKAAKSIY 123
+V+ A H+ +D L + P P + P +LA++IL+QQL+ KAA +I
Sbjct: 9 DVEAAFAHVSRRDRALGAWMKRIGPIAPQPGWHKPFDPVDALARAILFQQLSGKAASTIV 68
Query: 124 TRFVALFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDG-ILSDESIVEM 182
R V + G + D + + LR VS KA LRDLA + ++G I S + M
Sbjct: 69 AR-VEMAIGAQRLHADTLGRIDDAVLRACCVSGNKALALRDLARRESEGEIPSLRRLAFM 127
Query: 183 DDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKM 242
D+ + + L V+GIG W+V M ++F L +PD+LP+ DLGVRKG Q + +++P ++
Sbjct: 128 DEEAIVQALVPVRGIGRWTVEMMLMFRLGRPDLLPIDDLGVRKGAQRVDRQEQMPTPREL 187
Query: 243 EEVCEKWKPYRSVGSWYMWRLME 265
E+W PYR+ ++Y+W++ +
Sbjct: 188 AVRGERWGPYRTYAAFYLWKIAD 210
>gi|398348759|ref|ZP_10533462.1| DNA-3-methyladenine glycosylase II [Leptospira broomii str. 5399]
Length = 208
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 64/200 (32%), Positives = 114/200 (57%), Gaps = 6/200 (3%)
Query: 68 EVDIALRH----LRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIY 123
E ++ LR LR KDP+L LI+ P T + SP+ L KS++ QQL+ KAA ++
Sbjct: 2 EREVRLRKAESWLRRKDPVLRKLINRIGPCTLKMVGSPYHVLLKSVISQQLSVKAASTME 61
Query: 124 TRFVALFNGEDNI-LPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEM 182
R + F P+ +L +S +QLR G+S+ KA ++ +A Y G ++D + ++
Sbjct: 62 NRVIERFGSRKRFPEPNLLLGLSAEQLRSAGLSFAKADTVKRIASAYESGEITDRKLRKL 121
Query: 183 DDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKM 242
+D + + L S+KG+G W+ M ++F+L + D + DL +RK ++ +G+ ++
Sbjct: 122 EDEKVLEFLCSIKGVGPWTAEMVLMFALDRWDHFSLNDLILRKSIERHFGIHR-DSKKEI 180
Query: 243 EEVCEKWKPYRSVGSWYMWR 262
+ ++ PYR++ SWY+WR
Sbjct: 181 LALAGRFSPYRTIFSWYLWR 200
>gi|374291111|ref|YP_005038146.1| putative 3-methyl-adenine DNA glycosylase [Azospirillum lipoferum
4B]
gi|357423050|emb|CBS85893.1| putative 3-methyl-adenine DNA glycosylase [Azospirillum lipoferum
4B]
Length = 212
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 106/188 (56%), Gaps = 3/188 (1%)
Query: 75 HLRDKDPLLATLIDAHRPPTFESSR-SPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGE 133
HL DP+ A + P + +R + F+ L + ++ QQL+ K A +++ + GE
Sbjct: 5 HLAALDPIFAECLRVGGPVIRDFTRPTGFVGLLRMVMEQQLSTKVALALWAKLQDRLGGE 64
Query: 134 DNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTS 193
+ P A+LA++ + LR G S +K Y R LAE G L + I ++ D L +
Sbjct: 65 --VTPGAILALNDETLRACGFSRQKIGYARGLAEAVASGRLDFDIIHDLPDEEAIARLVA 122
Query: 194 VKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYR 253
+KGIG WS ++++ +L +PD+ P+GDL ++ G+Q L G + P A ++ EV E W+PYR
Sbjct: 123 LKGIGRWSAEVYLMTTLDRPDIWPIGDLAIQLGVQRLKGWADKPTAKQLIEVAEPWRPYR 182
Query: 254 SVGSWYMW 261
S+ + +W
Sbjct: 183 SLAARLVW 190
>gi|329906072|ref|ZP_08274355.1| DNA-3-methyladenine glycosylase II [Oxalobacteraceae bacterium
IMCC9480]
gi|327547347|gb|EGF32178.1| DNA-3-methyladenine glycosylase II [Oxalobacteraceae bacterium
IMCC9480]
Length = 216
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 103/191 (53%), Gaps = 3/191 (1%)
Query: 75 HLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGED 134
L +D ++ LI PF++LA+SI+ QQ++ K+A++ + RF+ +
Sbjct: 23 ELMKRDRIMRKLIPQFGDVHLTGRGEPFVTLARSIIGQQISVKSAEAAWQRFLLVCPKST 82
Query: 135 NILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSV 194
P V+ L G+S RKA Y+ DLAE + + + EMDD + L +
Sbjct: 83 ---PAQVVKAGAADLAGCGLSKRKADYILDLAEHFKAKRVHADKWAEMDDEAVIAELIQI 139
Query: 195 KGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRS 254
+GIG W+ MF+IF+L +P++LP+ D+G+ G+ + Y E EV W+P+R+
Sbjct: 140 RGIGRWTAEMFLIFNLLRPNILPLDDVGLLNGISLNYFSGEPVSRSDAREVSANWEPWRT 199
Query: 255 VGSWYMWRLME 265
V +WY+WR +E
Sbjct: 200 VATWYLWRSLE 210
>gi|156043143|ref|XP_001588128.1| hypothetical protein SS1G_10574 [Sclerotinia sclerotiorum 1980]
gi|154694962|gb|EDN94700.1| hypothetical protein SS1G_10574 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 418
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 68/176 (38%), Positives = 97/176 (55%), Gaps = 12/176 (6%)
Query: 69 VDIALRHLRDKDPLLATLIDAHRPPTFESSR-----SPFLSLAKSILYQQLAYKAAKSIY 123
+D AL HL +P L +I+ H F + PF +L I+ QQ++ AAKSI
Sbjct: 204 LDKALEHLIKVEPKLKPIIEKHPCRIFSAEGLAEEIEPFRALVSGIISQQVSGAAAKSIK 263
Query: 124 TRFVALFNGEDN-------ILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSD 176
+FVALFN D+ P A++A +LR G+S RKA Y+ LA K+TDG L+
Sbjct: 264 AKFVALFNPPDSDPSTHTFPTPSAIVATDLARLRTAGLSQRKAEYISGLALKFTDGELTT 323
Query: 177 ESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYG 232
+ ++ +F L V+G+G WSV MF F+L + DV GDLGV++G+ L G
Sbjct: 324 QFLLSASYEEVFASLIQVRGLGKWSVEMFACFALKRLDVFSTGDLGVQRGMAALLG 379
>gi|320102289|ref|YP_004177880.1| HhH-GPD family protein [Isosphaera pallida ATCC 43644]
gi|319749571|gb|ADV61331.1| HhH-GPD family protein [Isosphaera pallida ATCC 43644]
Length = 226
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 69/191 (36%), Positives = 103/191 (53%), Gaps = 9/191 (4%)
Query: 81 PLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFN------GED 134
PL+A L P +R F L ++I+ QQ+A KAA +I+ R V G
Sbjct: 34 PLVARLGPCDLTPQPPETR--FGILVRAIVGQQIAAKAASAIHRRLVLHLADDPESAGRF 91
Query: 135 NILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSV 194
P +L S + LR +G+S K +YLR LA +G L E + E+ D + LT+V
Sbjct: 92 VTDPQRLLDTSEENLRGLGLSRVKQTYLRALAHAQLNG-LEVERLHELPDDEIVARLTAV 150
Query: 195 KGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRS 254
KGIG W+ MF++F+L +PDV PVGDL +R G+ + + P + + W P+R+
Sbjct: 151 KGIGRWTAEMFLMFALARPDVFPVGDLAIRVGVARFHHIASPPSPADCLRLAQPWTPHRT 210
Query: 255 VGSWYMWRLME 265
+ SWY+WR +E
Sbjct: 211 LASWYLWRWVE 221
>gi|222111281|ref|YP_002553545.1| hhh-gpd family protein [Acidovorax ebreus TPSY]
gi|221730725|gb|ACM33545.1| HhH-GPD family protein [Acidovorax ebreus TPSY]
Length = 219
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 69/208 (33%), Positives = 109/208 (52%), Gaps = 6/208 (2%)
Query: 55 NSPKIFKPLTFKGEVDIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQL 114
++P P ++ E A RHL KD ++ LI F +LA+SI+ QQ+
Sbjct: 9 DAPPSLTPPSYWEE---ACRHLTKKDRVMRRLIPQVGNVALSQRGDAFTTLARSIVGQQV 65
Query: 115 AYKAAKSIYTRFVALFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGIL 174
+ +A+ ++ +F AL ++ P +VL + +R G+S RK YL DLA + G L
Sbjct: 66 SVASAQRVWDQFAALSR---SMTPRSVLKLKVDDMRAAGLSARKVEYLVDLALHFDSGRL 122
Query: 175 SDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLK 234
+ EMDD + L +++GI W+ MF+IF L +P+VLP+ D + +G+ Y
Sbjct: 123 HVKQWDEMDDQAIVAELVAIRGISRWTADMFLIFHLARPNVLPLDDATLIQGISQHYFSG 182
Query: 235 ELPGALKMEEVCEKWKPYRSVGSWYMWR 262
+ EV + WKP+ SV SWY+WR
Sbjct: 183 DPVSRSDAREVADAWKPWCSVASWYIWR 210
>gi|398340862|ref|ZP_10525565.1| DNA-3-methyladenine glycosylase II [Leptospira kirschneri serovar
Bim str. 1051]
gi|418677766|ref|ZP_13239040.1| base excision DNA repair protein, HhH-GPD family [Leptospira
kirschneri serovar Grippotyphosa str. RM52]
gi|418684996|ref|ZP_13246178.1| base excision DNA repair protein, HhH-GPD family [Leptospira
kirschneri serovar Grippotyphosa str. Moskva]
gi|418742791|ref|ZP_13299160.1| base excision DNA repair protein, HhH-GPD family [Leptospira
kirschneri serovar Valbuzzi str. 200702274]
gi|421092028|ref|ZP_15552789.1| base excision DNA repair protein, HhH-GPD family [Leptospira
kirschneri str. 200802841]
gi|400320956|gb|EJO68816.1| base excision DNA repair protein, HhH-GPD family [Leptospira
kirschneri serovar Grippotyphosa str. RM52]
gi|409999285|gb|EKO49980.1| base excision DNA repair protein, HhH-GPD family [Leptospira
kirschneri str. 200802841]
gi|410740404|gb|EKQ85120.1| base excision DNA repair protein, HhH-GPD family [Leptospira
kirschneri serovar Grippotyphosa str. Moskva]
gi|410749534|gb|EKR06518.1| base excision DNA repair protein, HhH-GPD family [Leptospira
kirschneri serovar Valbuzzi str. 200702274]
Length = 228
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 108/186 (58%), Gaps = 1/186 (0%)
Query: 76 LRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDN 135
LR KDP+ L+D+ P ++ +P+ L KS+L QQL+ K A + R ++L +
Sbjct: 34 LRKKDPITKKLVDSIGPCKLKTIGTPYQVLIKSVLGQQLSVKVALTFERRLISLAGSKKI 93
Query: 136 ILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVK 195
P+ +L + ++R+IGVS K ++ +AE Y ++D + +++D + K+L S+K
Sbjct: 94 PSPEQILKIPNDEMRKIGVSQAKTETIKRIAEAYLKRSITDSKLRKLEDSDVLKLLCSIK 153
Query: 196 GIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSV 255
G+G W+ M +IF+L + D + DL +RK ++ YG+ + +++ + + PYR++
Sbjct: 154 GVGPWTAEMVLIFALDRWDHFSINDLILRKSVEKHYGISK-DNKKEIQLLLNTYSPYRTI 212
Query: 256 GSWYMW 261
SWY+W
Sbjct: 213 ISWYLW 218
>gi|409405695|ref|ZP_11254157.1| 3-methyl-adenine DNA glycosylase II [Herbaspirillum sp. GW103]
gi|386434244|gb|EIJ47069.1| 3-methyl-adenine DNA glycosylase II [Herbaspirillum sp. GW103]
Length = 219
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 57/164 (34%), Positives = 93/164 (56%), Gaps = 3/164 (1%)
Query: 102 FLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNILPDAVLAVSPQQLREIGVSYRKASY 161
F +LA+S++ QQ++ KAA +++ RF+ P V+ L G+S RKA Y
Sbjct: 53 FTTLARSVIGQQISTKAANAVWQRFL---EACPRCTPAQVMRTGADGLATCGLSKRKAEY 109
Query: 162 LRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDL 221
+ DLA + + + EM+D + + ++GIG W+ MF+IF+L +P+VLP+ DL
Sbjct: 110 ILDLAAHFKAKTVHPDKWAEMEDEAVIAEMIQIRGIGRWTAEMFLIFNLLRPNVLPLDDL 169
Query: 222 GVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSWYMWRLME 265
G+ KG+ V Y E EV W+P+R+V +WY+WR ++
Sbjct: 170 GLLKGISVSYFSGEPVSRSDAREVAANWEPWRTVATWYLWRSLD 213
>gi|325914878|ref|ZP_08177213.1| 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase
[Xanthomonas vesicatoria ATCC 35937]
gi|325538969|gb|EGD10630.1| 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase
[Xanthomonas vesicatoria ATCC 35937]
Length = 224
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 70/203 (34%), Positives = 111/203 (54%), Gaps = 6/203 (2%)
Query: 68 EVDIALRHLRDKDPLLATLIDAHRP----PTFESSRSPFLSLAKSILYQQLAYKAAKSIY 123
+V+ A L +D L + P P + P +LA++IL+QQL+ KAA +I
Sbjct: 9 DVEAAFAQLSRRDRALGAWMKRIGPIAPQPGWRKPFDPVDALARAILFQQLSGKAASTIV 68
Query: 124 TRFVALFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDG-ILSDESIVEM 182
R V + G + D + V LR GVS KA LRDL + G I S + M
Sbjct: 69 AR-VEVAIGSSRLHADTLGRVDDAALRACGVSGNKALALRDLVRREALGEIPSLRKLAFM 127
Query: 183 DDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKM 242
+D + + L V+GIG W+V M ++F L +PD+LP+ DLGVRKG Q + +++P ++
Sbjct: 128 EDDAIVEALVPVRGIGRWTVEMMLMFRLGRPDLLPIDDLGVRKGAQRVDKQEQMPTPKEL 187
Query: 243 EEVCEKWKPYRSVGSWYMWRLME 265
E ++W PYR+ ++Y+W++ +
Sbjct: 188 AERGQRWGPYRTYAAFYLWKIAD 210
>gi|384418292|ref|YP_005627652.1| DNA-3-methyladenine glycosylase [Xanthomonas oryzae pv. oryzicola
BLS256]
gi|353461206|gb|AEQ95485.1| DNA-3-methyladenine glycosylase [Xanthomonas oryzae pv. oryzicola
BLS256]
Length = 224
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 72/203 (35%), Positives = 112/203 (55%), Gaps = 6/203 (2%)
Query: 68 EVDIALRHLRDKDPLLATL---IDAHRP-PTFESSRSPFLSLAKSILYQQLAYKAAKSIY 123
+V+ A HL +D L I A P P + P +LA++IL+QQL+ KAA +I
Sbjct: 9 DVEAAFAHLARRDRALGAWMKRIGAIAPQPGWRKPFDPVDALARAILFQQLSGKAASTIV 68
Query: 124 TRFVALFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDG-ILSDESIVEM 182
R V + G + + + + LR GVS KA LRDLA + + G I S + M
Sbjct: 69 AR-VEVAIGAQRLHANTLGRIDDAALRACGVSGNKALALRDLARRESAGEIPSLRRLAFM 127
Query: 183 DDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKM 242
+D + L V+GIG W+V M ++F L +PD+LP+ DLGVRKG Q + + +P ++
Sbjct: 128 EDNAIVDALVPVRGIGRWTVEMMLMFRLGRPDLLPIDDLGVRKGAQRVDKQEHMPTPKEL 187
Query: 243 EEVCEKWKPYRSVGSWYMWRLME 265
E+W PYR+ ++Y+W++ +
Sbjct: 188 AVRGERWGPYRTYAAFYLWKIAD 210
>gi|340788426|ref|YP_004753891.1| putative DNA-3-methyladenine glycosylase protein [Collimonas
fungivorans Ter331]
gi|340553693|gb|AEK63068.1| putative DNA-3-methyladenine glycosylase protein [Collimonas
fungivorans Ter331]
Length = 231
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 61/175 (34%), Positives = 99/175 (56%), Gaps = 17/175 (9%)
Query: 98 SRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNILPDAVLAVSPQQLRE------ 151
+R P+ +L ++I YQQL +A +I R +ALF D P A +QLR+
Sbjct: 51 ARDPYEALVRAIAYQQLHARAGDAILGRMLALFG--DAPFPSA------RQLRDTPVDIL 102
Query: 152 --IGVSYRKASYLRDLAEKYTDGILSDES-IVEMDDVTMFKMLTSVKGIGAWSVHMFMIF 208
G S K + + +A+ DG++ + V M D + + LTS++G+G W+V MF+I+
Sbjct: 103 HGCGFSAGKIATIHGIAQAALDGVVPPRAEAVTMSDADLIERLTSLRGVGRWTVEMFLIY 162
Query: 209 SLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSWYMWRL 263
+L + D+LP D GVR+G + L L + P ++ ++ W PYR+V +WY+WRL
Sbjct: 163 TLERMDILPADDFGVREGYRRLKNLPQAPTKKQIGDIGRAWSPYRTVAAWYLWRL 217
>gi|58583147|ref|YP_202163.1| DNA-3-methyladenine glycosylase [Xanthomonas oryzae pv. oryzae KACC
10331]
gi|84624987|ref|YP_452359.1| DNA-3-methyladenine glycosylase [Xanthomonas oryzae pv. oryzae MAFF
311018]
gi|188575552|ref|YP_001912481.1| DNA-3-methyladenine glycosylase [Xanthomonas oryzae pv. oryzae
PXO99A]
gi|58427741|gb|AAW76778.1| DNA-3-methyladenine glycosylase [Xanthomonas oryzae pv. oryzae KACC
10331]
gi|84368927|dbj|BAE70085.1| DNA-3-methyladenine glycosylase [Xanthomonas oryzae pv. oryzae MAFF
311018]
gi|188520004|gb|ACD57949.1| DNA-3-methyladenine glycosylase [Xanthomonas oryzae pv. oryzae
PXO99A]
Length = 224
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 72/203 (35%), Positives = 111/203 (54%), Gaps = 6/203 (2%)
Query: 68 EVDIALRHLRDKDPLLATL---IDAHRP-PTFESSRSPFLSLAKSILYQQLAYKAAKSIY 123
+V+ A HL +D L I A P P + P +LA++IL+QQL+ KAA +I
Sbjct: 9 DVEAAFAHLARRDRALGAWMKRIGAIAPQPGWRKPFDPVDALARAILFQQLSGKAASTIV 68
Query: 124 TRFVALFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDG-ILSDESIVEM 182
R V + G + D + + LR GVS KA LRDL + + G I S + M
Sbjct: 69 AR-VKVAIGAQRLHADTLGRIDDAALRACGVSGNKALALRDLVRRESAGEIPSLRRLAFM 127
Query: 183 DDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKM 242
+D + L V+GIG W+V M ++F L +PD+LP+ DLGVRKG Q + + +P ++
Sbjct: 128 EDNAIVDALVPVRGIGRWTVEMMLMFRLGRPDLLPIDDLGVRKGAQRVDKQEHMPTPKEL 187
Query: 243 EEVCEKWKPYRSVGSWYMWRLME 265
E+W PYR+ ++Y+W++ +
Sbjct: 188 AVRGERWGPYRTYAAFYLWKIAD 210
>gi|315056675|ref|XP_003177712.1| DNA-3-methyladenine glycosylase [Arthroderma gypseum CBS 118893]
gi|311339558|gb|EFQ98760.1| DNA-3-methyladenine glycosylase [Arthroderma gypseum CBS 118893]
Length = 396
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 80/234 (34%), Positives = 110/234 (47%), Gaps = 44/234 (18%)
Query: 72 ALRHLRDKDPLLATLIDAH-----RPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRF 126
A+ HL D L +ID RP PF +L I+ QQ++ AAKSI +F
Sbjct: 153 AIAHLLSVDARLKPVIDKFPDAPFRPADLAVEIDPFQALVSGIIGQQVSGAAAKSIKNKF 212
Query: 127 VALF------------NGEDNILPDAVLAV------SPQQ--------LREIGVSYRKAS 160
++LF +GED + DA L SPQQ LR G+S RKA
Sbjct: 213 ISLFSATTEQAGAEAEDGEDEV-GDAGLRYRPVPFPSPQQVVSLDLPTLRTAGLSQRKAE 271
Query: 161 YLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGD 220
Y+ LAEK+ G LS ++ D + + L +V+G+G WSV MF+ F L + DV GD
Sbjct: 272 YIHGLAEKFVSGELSARMLLTASDEEVLEKLIAVRGLGKWSVEMFLFFGLKRMDVFSTGD 331
Query: 221 LGVRKGLQVLYG------------LKELPGALKMEEVCEKWKPYRSVGSWYMWR 262
LGV++G+ G + M E+ + PYRS+ WYMWR
Sbjct: 332 LGVQRGMAAFAGRDVGKLKAKGGGKFKYMSEKDMVEIAAPFSPYRSLFMWYMWR 385
>gi|397620086|gb|EJK65535.1| hypothetical protein THAOC_13590 [Thalassiosira oceanica]
Length = 327
Score = 117 bits (294), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 61/183 (33%), Positives = 109/183 (59%), Gaps = 22/183 (12%)
Query: 102 FLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNILPDAVLAVSPQ-----QLRE-IGVS 155
F SL ++++ Q LA KAA++I+++ + + N+ P ++A++ + +LR+ +G+S
Sbjct: 139 FRSLCRTVIAQLLADKAARTIHSKLLDVVGSSSNLTPSNIVAIAARGDVENELRKPVGLS 198
Query: 156 YRKASYLRDLAEKYTDGILSDESIVEMDDVTMFK-MLTSVKGIGAWSVHMFMIFSLHKPD 214
K + + LAE + G LSD+ +++ D + + L VKGIG W+V MFM+FS H P+
Sbjct: 199 NAKCNCILKLAELFQSGTLSDDLLLKTSDESAVRERLIQVKGIGQWTVDMFMLFSRHSPN 258
Query: 215 VLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEK------------WKPYRSVGSWYMWR 262
V P+GDL R+G + ++G+K G+ K E+C K + PYRS+ ++YM++
Sbjct: 259 VFPIGDLAFRRGTKKVFGIK---GSAKGGELCPKKDLQKILDAHAPFHPYRSISAYYMYK 315
Query: 263 LME 265
+
Sbjct: 316 AQD 318
>gi|389796690|ref|ZP_10199741.1| dna-3-methyladenine glycosylase protein [Rhodanobacter sp. 116-2]
gi|388448215|gb|EIM04200.1| dna-3-methyladenine glycosylase protein [Rhodanobacter sp. 116-2]
Length = 215
Score = 117 bits (294), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 92/167 (55%), Gaps = 1/167 (0%)
Query: 98 SRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNILPDAVLAVSPQQLREIGVSYR 157
+R P+ +L +++ YQQL KA +I R +AL P + +R G S R
Sbjct: 35 AREPYEALVRAVAYQQLHVKAGDAILARLLALHPRRAFPSPAQLRDAGFDSMRACGFSAR 94
Query: 158 KASYLRDLAEKYTDGILSD-ESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVL 216
K +R +A +G++ D + + + D + L+ +KGIG W+V MF+I+SL +PD+L
Sbjct: 95 KIETIRGIAAATLEGVVPDLSAALALPDEELIARLSVLKGIGRWTVEMFLIYSLDRPDIL 154
Query: 217 PVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSWYMWRL 263
P D GVR+G ++L L+ P + + W PYR+ +WY+WR+
Sbjct: 155 PANDFGVREGYRLLKSLETAPTPKALAAIGAAWSPYRTAAAWYLWRV 201
>gi|269122703|ref|YP_003310880.1| HhH-GPD family protein [Sebaldella termitidis ATCC 33386]
gi|268616581|gb|ACZ10949.1| HhH-GPD family protein [Sebaldella termitidis ATCC 33386]
Length = 201
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 64/189 (33%), Positives = 110/189 (58%), Gaps = 4/189 (2%)
Query: 75 HLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGED 134
+L+ KD LA +ID P E F L SI+ QQ++ KA +I+ R LF
Sbjct: 13 YLKKKDKRLAEVIDRIGPVQREIIPDLFAGLVNSIVGQQISTKAFITIWNRIKDLFG--- 69
Query: 135 NILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSV 194
+ P+++L+ S ++L++ G++ +K+ Y+R++A +G L+ + + E+ D + L+S+
Sbjct: 70 TVTPESILSKSAEELQKCGITMKKSVYIRNIAVDIINGSLNLDELYELPDDEVCHRLSSL 129
Query: 195 KGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRS 254
GIG W+ M M FS+ +PD+L DL +R+G+ +LY K+L L E +++ PY S
Sbjct: 130 NGIGTWTAEMLMTFSMQRPDILSWDDLAIRRGIMMLYRHKKLDKNL-FERYKKRYSPYGS 188
Query: 255 VGSWYMWRL 263
V S Y+W +
Sbjct: 189 VASLYLWEI 197
>gi|19114903|ref|NP_593991.1| DNA-3-methyladenine glycosylase Mag1 [Schizosaccharomyces pombe
972h-]
gi|2494171|sp|Q92383.1|MAG1_SCHPO RecName: Full=DNA-3-methyladenine glycosylase 1; AltName:
Full=3-methyladenine DNA glycosidase 1; AltName:
Full=3MEA DNA glycosylase 1
gi|361131494|pdb|3S6I|A Chain A, Schizosaccaromyces Pombe 3-Methyladenine Dna Glycosylase
(Mag1) In Complex With Abasic-Dna.
gi|361131497|pdb|3S6I|D Chain D, Schizosaccaromyces Pombe 3-Methyladenine Dna Glycosylase
(Mag1) In Complex With Abasic-Dna.
gi|3645901|gb|AAC49524.1| 3-methyladenine DNA glycosylase [Schizosaccharomyces pombe]
gi|13624907|emb|CAC36900.1| DNA-3-methyladenine glycosylase Mag1 [Schizosaccharomyces pombe]
Length = 228
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 107/199 (53%), Gaps = 7/199 (3%)
Query: 68 EVDIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFV 127
+ +I L L + L L+ +RP + P+ L +++ QQL KAA +I+ RF
Sbjct: 17 KAEIHLSGLDENWKRLVKLVGNYRPNRSMEKKEPYEELIRAVASQQLHSKAANAIFNRFK 76
Query: 128 ALFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGIL-SDESIVEMDDVT 186
++ N P+ + + + +R G S RK L+ +AE G++ + E + +
Sbjct: 77 SISNNGQFPTPEEIRDMDFEIMRACGFSARKIDSLKSIAEATISGLIPTKEEAERLSNEE 136
Query: 187 MFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPG---ALKME 243
+ + LT +KGIG W+V M +IFSL++ DV+P DL +R G + L+ L ++P LK
Sbjct: 137 LIERLTQIKGIGRWTVEMLLIFSLNRDDVMPADDLSIRNGYRYLHRLPKIPTKMYVLKHS 196
Query: 244 EVCEKWKPYRSVGSWYMWR 262
E+C P+R+ +WY+W+
Sbjct: 197 EIC---APFRTAAAWYLWK 212
>gi|264677339|ref|YP_003277245.1| hypothetical protein CtCNB1_1203 [Comamonas testosteroni CNB-2]
gi|262207851|gb|ACY31949.1| HhH-GPD [Comamonas testosteroni CNB-2]
Length = 274
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 68/203 (33%), Positives = 113/203 (55%), Gaps = 11/203 (5%)
Query: 72 ALRHLRDKDPLLATLI-----DAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRF 126
A R L +D +L LI A P E + F +LA+SI+ QQ++ K+AK+++ +F
Sbjct: 77 ACRQLMRRDRVLKRLIPQLGSQALLPCGQEQA---FATLARSIIGQQISAKSAKTLWNKF 133
Query: 127 VALFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVT 186
V L + P+ VL + +R +G+S RK YL DLA +T+ L + +M D
Sbjct: 134 VRLPAA---MQPEQVLRLKVDDMRAVGLSARKVDYLVDLALHFTENRLHMDEWAQMSDEV 190
Query: 187 MFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVC 246
+ L S++G+ W+ F+I+ L +P+VLP+ D G+ +G+ + + + EV
Sbjct: 191 IIAELMSIRGLSRWTAENFLIYCLGRPNVLPLDDAGLIQGISLNHFSGDPVSRSDAREVA 250
Query: 247 EKWKPYRSVGSWYMWRLMEAKGV 269
E WKP+ +V +WY+WR +EA+ V
Sbjct: 251 EAWKPWCTVATWYIWRSLEAQPV 273
>gi|357008835|ref|ZP_09073834.1| HhH-GPD family protein [Paenibacillus elgii B69]
Length = 215
Score = 117 bits (293), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 70/192 (36%), Positives = 107/192 (55%), Gaps = 3/192 (1%)
Query: 70 DIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVAL 129
D + +L D LA LI TF S F SL SI+ QQL+ KAA +I R +L
Sbjct: 7 DERISYLCRNDAKLAALIALIGEVTFNVRSSHFESLVLSIVGQQLSVKAAATINNRVRSL 66
Query: 130 FNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFK 189
+ +I P+ + V P+ LR G+S K +Y++DL+ K + + +++D + +
Sbjct: 67 VS---SITPEEIDRVDPETLRTAGLSSAKINYIKDLSTKMLHQEIDLTLLPQLEDREVIE 123
Query: 190 MLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKW 249
MLT VKGIG W+ MF+IFSL + +VL +GD+G+ +G + LY + + + +KW
Sbjct: 124 MLTKVKGIGQWTAEMFLIFSLGRMNVLSLGDVGLVRGARWLYSEEHKKDGNPLAQHAQKW 183
Query: 250 KPYRSVGSWYMW 261
PY SV S Y+W
Sbjct: 184 SPYCSVASLYLW 195
>gi|392425487|ref|YP_006466481.1| HhH-GPD superfamily base excision DNA repair protein
[Desulfosporosinus acidiphilus SJ4]
gi|391355450|gb|AFM41149.1| HhH-GPD superfamily base excision DNA repair protein
[Desulfosporosinus acidiphilus SJ4]
Length = 206
Score = 117 bits (293), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 68/203 (33%), Positives = 114/203 (56%), Gaps = 6/203 (2%)
Query: 61 KPLTFKGEVDIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAK 120
KP+ G+ +I +L+ KD L ID E PF +L SI+ QQ++ KAA+
Sbjct: 8 KPIFVYGQKEID--YLKRKDKKLGLAIDKIGFIRREIIPDPFTALISSIVSQQISNKAAE 65
Query: 121 SIYTRFVALFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIV 180
+++ R +L ++ P ++ V +++ G+S RKA Y++ +A+ +G + + I
Sbjct: 66 TVWMRLTSLI---PDLTPGSIARVPLSEIKACGMSERKAGYIKGIADSALNGAIDFQDIN 122
Query: 181 EMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGAL 240
+ D+ + LTS++G+G W+ M +IFSL++ DVL DL + +G+ LY LKELP
Sbjct: 123 SLSDLDIISKLTSLRGVGVWTAEMILIFSLNRLDVLSFKDLAICRGMMNLYNLKELPKE- 181
Query: 241 KMEEVCEKWKPYRSVGSWYMWRL 263
E +++ PY SV S Y+W L
Sbjct: 182 TFERYRKRYSPYGSVASLYLWAL 204
>gi|319943840|ref|ZP_08018121.1| methylated-DNA--protein-cysteine methyltransferase [Lautropia
mirabilis ATCC 51599]
gi|319743073|gb|EFV95479.1| methylated-DNA--protein-cysteine methyltransferase [Lautropia
mirabilis ATCC 51599]
Length = 222
Score = 117 bits (293), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 109/201 (54%), Gaps = 6/201 (2%)
Query: 73 LRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNG 132
L HLR +DP LA ID E F +L SI+ QQ++ KA +I+ + F G
Sbjct: 18 LDHLRTRDPRLAVAIDRIGLIRREVQPDLFHALVHSIIGQQISTKAQTTIWGKMQTRFPG 77
Query: 133 EDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLT 192
+ P+ + + +L+ +G+++RKA Y++D+A +G ++ ++DD + L+
Sbjct: 78 ---VSPEVMASCELDELQGVGITFRKAGYIQDIARSIVEGRTDLHALAQLDDEALCHALS 134
Query: 193 SVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPY 252
+GIG W+ M M+FSL +PD++ GDL + +G+++LY + + L ++ PY
Sbjct: 135 QFRGIGVWTAEMLMLFSLQRPDIVSYGDLAILRGMRMLYRHRSITPQL-FARYRRRYSPY 193
Query: 253 RSVGSWYMWRLMEAKGVLPNV 273
S S Y+W + A G LP +
Sbjct: 194 GSTASLYLWAI--AGGALPEL 212
>gi|374993782|ref|YP_004969281.1| HhH-GPD superfamily base excision DNA repair protein
[Desulfosporosinus orientis DSM 765]
gi|357212148|gb|AET66766.1| HhH-GPD superfamily base excision DNA repair protein
[Desulfosporosinus orientis DSM 765]
Length = 199
Score = 117 bits (293), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 115/194 (59%), Gaps = 4/194 (2%)
Query: 70 DIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVAL 129
D + +L+ KD L I+ + + PF+++ S++ QQ++ KAA++++ R ++L
Sbjct: 8 DKEINYLKRKDKKLGAAIERIGMIERKITPDPFIAIVSSVVSQQISNKAAETVWNRLLSL 67
Query: 130 FNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFK 189
+ I P+ + ++ +++ G+S RKA Y++ +A+ G + +++ + D +
Sbjct: 68 L---ERITPENIAQMNVSKIQGCGMSERKAGYIKGIADAAISGSVDFKTLHTLSDQEIID 124
Query: 190 MLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKW 249
+L+S+ G+G W+ M +IFSL +PDV+ DL + +G++ LYGLKELP K E +++
Sbjct: 125 VLSSLHGVGVWTAEMILIFSLTRPDVVSYRDLAICRGMKNLYGLKELPKE-KFERYRKRY 183
Query: 250 KPYRSVGSWYMWRL 263
PY +V S Y+W L
Sbjct: 184 SPYGTVASLYLWAL 197
>gi|418695201|ref|ZP_13256224.1| base excision DNA repair protein, HhH-GPD family [Leptospira
kirschneri str. H1]
gi|409957004|gb|EKO15922.1| base excision DNA repair protein, HhH-GPD family [Leptospira
kirschneri str. H1]
Length = 228
Score = 117 bits (292), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 109/186 (58%), Gaps = 1/186 (0%)
Query: 76 LRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDN 135
LR KDP+ L+D+ ++ +P+ L KS+L QQL+ K A + R ++L +
Sbjct: 34 LRKKDPITKKLVDSIGLCKLKTIGTPYQVLIKSVLGQQLSVKVALTFERRLISLAGSKKI 93
Query: 136 ILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVK 195
P+ +L + ++R+IGVS KA ++ +AE Y+ ++D + +++D + K+L S+K
Sbjct: 94 PSPEQILKIPNDEMRKIGVSQAKAETIKRIAEAYSKRSITDSKLRKLEDSDVLKLLCSIK 153
Query: 196 GIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSV 255
G+G W+ M +IF+L + D + DL +RK ++ YG+ + +++ + + PYR++
Sbjct: 154 GVGPWTAEMVLIFALDRWDHFSINDLILRKSVEKHYGISK-DNKKEIQLLLNTYSPYRTI 212
Query: 256 GSWYMW 261
SWY+W
Sbjct: 213 ISWYLW 218
>gi|409400533|ref|ZP_11250573.1| DNA-3-methyladenine glycosylase II [Acidocella sp. MX-AZ02]
gi|409130513|gb|EKN00275.1| DNA-3-methyladenine glycosylase II [Acidocella sp. MX-AZ02]
Length = 211
Score = 117 bits (292), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 68/199 (34%), Positives = 107/199 (53%), Gaps = 8/199 (4%)
Query: 69 VDIALRHLRDKDPLLATLID--AHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRF 126
+D L HL DP L LI P + + +L +I +QQL KAA+SI R
Sbjct: 1 MDDPLPHLSKADPRLGDLIKRLGKLPRVNPEHKELYHALFSAIAHQQLHAKAAQSILGR- 59
Query: 127 VALFNGEDNILPDA--VLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVE-MD 183
L + LPD+ +LA+ LR G S K + LRD+A K DG + + + +
Sbjct: 60 --LRSACGETLPDSATLLALPDSTLRACGFSGSKVAALRDVAAKAADGTIPSHRVAKTLT 117
Query: 184 DVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKME 243
D + L +++G+G W+V M +IF+L +PD+ PV D GVR+G ++L+GL P
Sbjct: 118 DEELIARLITIRGVGRWTVEMILIFTLERPDIFPVDDFGVREGYRILHGLDAQPKPKAFI 177
Query: 244 EVCEKWKPYRSVGSWYMWR 262
E+ + + P+R++ + Y+WR
Sbjct: 178 EIGKAYAPHRTLAARYLWR 196
>gi|315647225|ref|ZP_07900338.1| DNA-3-methyladenine glycosidase [Paenibacillus vortex V453]
gi|315277427|gb|EFU40756.1| DNA-3-methyladenine glycosidase [Paenibacillus vortex V453]
Length = 223
Score = 117 bits (292), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 67/196 (34%), Positives = 106/196 (54%), Gaps = 7/196 (3%)
Query: 73 LRHLRDKDPLLATLID--AHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALF 130
+R L DPLL L+ H +E F + ++++ QQL+ KAA++I+ R +
Sbjct: 17 VRQLCMADPLLGELVQRIGHIQVPYEPD--GFTYITRTLVGQQLSIKAARTIFLRVEQVC 74
Query: 131 NGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKM 190
I DA+LA + + LR G+S K Y+R+ AE+ G L S+ ++DD + +
Sbjct: 75 G---TITADAILAAAEESLRSAGLSRNKLGYIRNAAEQTKLGALHFPSLADLDDDEVVRQ 131
Query: 191 LTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWK 250
LT VKGIG W+ MF+IF L + DVL GD G+++ + LY + G + +WK
Sbjct: 132 LTLVKGIGRWTAEMFLIFHLGRQDVLSFGDHGLKRASEWLYAAEASEGRSPLHRKQAEWK 191
Query: 251 PYRSVGSWYMWRLMEA 266
PY ++ S Y+W + A
Sbjct: 192 PYSTIASLYLWEAINA 207
>gi|323141170|ref|ZP_08076071.1| base excision DNA repair protein, HhH-GPD family
[Phascolarctobacterium succinatutens YIT 12067]
gi|322414313|gb|EFY05131.1| base excision DNA repair protein, HhH-GPD family
[Phascolarctobacterium succinatutens YIT 12067]
Length = 210
Score = 116 bits (291), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 63/191 (32%), Positives = 103/191 (53%), Gaps = 4/191 (2%)
Query: 74 RHLRDKDPLLATLIDAHRPPTFE--SSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFN 131
R+LR+ P LA L+D + P + S F L I+ QQL ++ + + L
Sbjct: 14 RYLRENVPELAPLVDRYSPCPLKPKSKEVYFTILLTGIIAQQLPPDVSQQLMKKLEGLTG 73
Query: 132 GEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKML 191
+ I P AVLA S + L IG+ +K YLR AE +G ++ + +M D + K L
Sbjct: 74 --NPITPQAVLAASAEDLLSIGLVKQKIDYLRSFAEAVINGSVTMDKFDDMTDGQITKQL 131
Query: 192 TSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKP 251
++G+G W++ MF++ +L + DV+P D +K LQ + L E+P K+ + E W+P
Sbjct: 132 MQIRGLGQWTIEMFLLLALCRTDVVPSSDFIFKKELQKMLNLSEIPKRGKINTLTETWRP 191
Query: 252 YRSVGSWYMWR 262
+RS+ WY+W+
Sbjct: 192 WRSLAVWYIWQ 202
>gi|121593997|ref|YP_985893.1| HhH-GPD family protein [Acidovorax sp. JS42]
gi|120606077|gb|ABM41817.1| HhH-GPD family protein [Acidovorax sp. JS42]
Length = 219
Score = 116 bits (291), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 109/210 (51%), Gaps = 7/210 (3%)
Query: 53 SDNSPKIFKPLTFKGEVDIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQ 112
+D P + P ++ A RHL KD ++ LI F +LA+SI+ Q
Sbjct: 8 ADTHPSLTPPSYWEE----ACRHLTKKDRVMRRLIPQVGNVALSQRGDAFTTLARSIVGQ 63
Query: 113 QLAYKAAKSIYTRFVALFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDG 172
Q++ +A+ ++ +F AL ++ P +VL + +R G+S RK YL DLA + G
Sbjct: 64 QVSVASAQRVWDQFAALSR---SMTPRSVLKLKVDDMRAAGLSARKVEYLVDLALHFDSG 120
Query: 173 ILSDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYG 232
L + +MDD + L +++GI W+ MF+IF L +P+VLP+ D + +G+ Y
Sbjct: 121 RLHVKQWDQMDDQAIVAELVAIRGISRWTADMFLIFHLARPNVLPLDDATLIQGISQHYF 180
Query: 233 LKELPGALKMEEVCEKWKPYRSVGSWYMWR 262
+ EV + WKP+ SV SWY+WR
Sbjct: 181 SGDPVSRSDAREVADAWKPWCSVASWYIWR 210
>gi|126656630|ref|ZP_01727844.1| HhH-GPD [Cyanothece sp. CCY0110]
gi|126621850|gb|EAZ92558.1| HhH-GPD [Cyanothece sp. CCY0110]
Length = 180
Score = 116 bits (291), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 62/176 (35%), Positives = 100/176 (56%), Gaps = 6/176 (3%)
Query: 72 ALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFN 131
A +L KD +LA LI ++ T + +PFL+LA +I+ QQ++ AA ++ R +L
Sbjct: 10 AKEYLAKKDDILANLISSYSSETIINYHNPFLTLANAIIGQQISVSAATTVSQRLKSLLG 69
Query: 132 GEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKML 191
+I L LR+ G+SYRK SY+ ++A+ + IL+ ++ M D + K L
Sbjct: 70 ---DITIKNYLEADEASLRKCGLSYRKISYITNIAQGFEQDILTPKTWSMMSDQEVIKQL 126
Query: 192 TSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCE 247
TS+KGIG W+ MF+IF LH+ D+ P+ DLG+ +Q Y + +L E++ E
Sbjct: 127 TSIKGIGLWTAQMFLIFHLHRKDIFPIADLGLINAIQRHYSTE---NSLTKEQILE 179
>gi|58261184|ref|XP_568002.1| DNA-3-methyladenine glycosidase [Cryptococcus neoformans var.
neoformans JEC21]
gi|134115807|ref|XP_773617.1| hypothetical protein CNBI2310 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50256243|gb|EAL18970.1| hypothetical protein CNBI2310 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57230084|gb|AAW46485.1| DNA-3-methyladenine glycosidase, putative [Cryptococcus neoformans
var. neoformans JEC21]
Length = 461
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/190 (38%), Positives = 104/190 (54%), Gaps = 7/190 (3%)
Query: 44 PVATAISTNSDNSPKIFKPLTFKGEVDIALRHLRDKDPLLATLID--AHRPPTFESSRSP 101
P +TA+ + P + P T + A+ HL DP + + RP + P
Sbjct: 71 PPSTAVDLPTVPQPTLLPP-TLNFNLPSAISHLSALDPRFSLFFEHLPCRPFVNLEAIDP 129
Query: 102 FLSLAKSILYQQLAYKAAKSIYTRFVALFN----GEDNILPDAVLAVSPQQLREIGVSYR 157
F +L SI+ QQ+++ AA++I TRF ALF E P VL L+ +G+S R
Sbjct: 130 FRTLVTSIIGQQVSWMAARAINTRFRALFGFTHEKEGFPSPQMVLMQDVTSLKGVGLSGR 189
Query: 158 KASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLP 217
KA Y+ LA+ + G LS + + D + K L +V+GIG W+V MFMIFSL +PD+L
Sbjct: 190 KAEYVLSLADHFASGQLSTQLLQSGTDEEISKALIAVRGIGQWTVDMFMIFSLRRPDILA 249
Query: 218 VGDLGVRKGL 227
VGDLGV+KGL
Sbjct: 250 VGDLGVQKGL 259
>gi|193222289|emb|CAL61460.2| Putative DNA-3-methyladenine glycosylase [Herminiimonas
arsenicoxydans]
Length = 215
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 63/192 (32%), Positives = 105/192 (54%), Gaps = 4/192 (2%)
Query: 75 HLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGED 134
L +D ++ LI S PF +LA+SI+ QQ++ KAA S++ RF+ +
Sbjct: 23 ELMKRDRIMRKLIPQFGDLHLASRGEPFSTLARSIIGQQISVKAADSVWQRFLEICP--- 79
Query: 135 NILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSV 194
P V+ +L G+S RK+ Y+ DLA+ + ++ + EM+D + L +
Sbjct: 80 KCTPVQVIKAG-DKLASCGLSKRKSEYILDLADHFKAKRVNCDKWAEMEDEDVIADLIQI 138
Query: 195 KGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRS 254
+GIG W+ MF+IF+L +P++LP+ D+G+ G+ Y E EV W+PYR+
Sbjct: 139 RGIGRWTAEMFLIFNLLRPNILPLDDVGLLAGISRNYFSGEPVSRSDAREVAANWEPYRT 198
Query: 255 VGSWYMWRLMEA 266
V +WY+WR ++A
Sbjct: 199 VATWYLWRSLDA 210
>gi|398331296|ref|ZP_10516001.1| DNA-3-methyladenine glycosylase II [Leptospira alexanderi serovar
Manhao 3 str. L 60]
Length = 228
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 107/186 (57%), Gaps = 1/186 (0%)
Query: 76 LRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDN 135
LR KDP+ LID+ P ++ +P+ L KS+L QQL+ K A + R +AL +
Sbjct: 34 LRKKDPITKKLIDSVGPCKLQTIGNPYQVLIKSVLGQQLSVKVALTFERRLIALAESKKI 93
Query: 136 ILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVK 195
P+ +L + ++R+IGVS K ++ +AE Y + ++D + +++D + +L S K
Sbjct: 94 PSPEQILRIPTSEMRKIGVSQAKTETIQRVAEAYLNRDITDSKLRKLEDSDVLNLLCSFK 153
Query: 196 GIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSV 255
G+G W+ M +IF+L + D + DL +RK ++ YG+ + +++ + + P+R++
Sbjct: 154 GVGPWTAEMVLIFALDRWDHFSINDLILRKSVEKHYGISK-DNKKEIQHFLKSYSPFRTI 212
Query: 256 GSWYMW 261
SWY+W
Sbjct: 213 LSWYLW 218
>gi|418719777|ref|ZP_13278976.1| base excision DNA repair protein, HhH-GPD family [Leptospira
borgpetersenii str. UI 09149]
gi|418737460|ref|ZP_13293857.1| base excision DNA repair protein, HhH-GPD family [Leptospira
borgpetersenii serovar Castellonis str. 200801910]
gi|421093715|ref|ZP_15554439.1| base excision DNA repair protein, HhH-GPD family [Leptospira
borgpetersenii str. 200801926]
gi|410363698|gb|EKP14727.1| base excision DNA repair protein, HhH-GPD family [Leptospira
borgpetersenii str. 200801926]
gi|410743820|gb|EKQ92562.1| base excision DNA repair protein, HhH-GPD family [Leptospira
borgpetersenii str. UI 09149]
gi|410746654|gb|EKQ99560.1| base excision DNA repair protein, HhH-GPD family [Leptospira
borgpetersenii serovar Castellonis str. 200801910]
gi|456891392|gb|EMG02112.1| base excision DNA repair protein, HhH-GPD family [Leptospira
borgpetersenii str. 200701203]
Length = 228
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 109/191 (57%), Gaps = 1/191 (0%)
Query: 76 LRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDN 135
LR KDP+ L+D+ P ++ +P+ L KS+L QQL+ K A + R ++L +
Sbjct: 34 LRKKDPITKKLVDSIGPCKLQTIGNPYQVLIKSVLGQQLSVKVALTFERRLISLAGSKKI 93
Query: 136 ILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVK 195
PD +L + ++L++IGVS K ++ +AE Y + ++D + +++D + +L S K
Sbjct: 94 PSPDQILMIPNEELKKIGVSRAKIETIKRIAEAYLNRDITDSKLRKLEDSDVLNLLCSFK 153
Query: 196 GIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSV 255
G+G W+ M +IF+L + D + DL +RK ++ YG+ + +++ + P+R++
Sbjct: 154 GVGPWTAEMVLIFALDRWDHFSINDLILRKSVEKHYGISK-DNKKEIQHFLMSYSPFRTI 212
Query: 256 GSWYMWRLMEA 266
SWY+W M+
Sbjct: 213 LSWYLWADMDG 223
>gi|398343729|ref|ZP_10528432.1| DNA-3-methyladenine glycosylase II [Leptospira inadai serovar Lyme
str. 10]
Length = 208
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 108/188 (57%), Gaps = 2/188 (1%)
Query: 76 LRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDN 135
LR KDP++ LI P T + SP+ L KS++ QQL+ KAA ++ R + F
Sbjct: 14 LRRKDPVMRKLITGIGPCTLKMVGSPYHVLIKSVISQQLSVKAAATMENRVIERFGSRKR 73
Query: 136 I-LPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSV 194
P+ +L +S ++LR G+S+ K + +R +A Y G ++D + +++D + + L S+
Sbjct: 74 FPEPNRLLGLSAEELRSAGLSFAKVATVRRIATAYDSGEITDRKLRKLEDEKVLEFLCSI 133
Query: 195 KGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRS 254
KG+G W+ M ++F+L + D + DL +RK ++ +G+ ++ + ++ PYR+
Sbjct: 134 KGVGPWTAEMVLMFALDRWDHFSLNDLILRKSIERHFGIHR-NSKKEILALAGRFSPYRT 192
Query: 255 VGSWYMWR 262
+ SWY+WR
Sbjct: 193 IFSWYLWR 200
>gi|328954683|ref|YP_004372016.1| DNA-3-methyladenine glycosylase II [Coriobacterium glomerans PW2]
gi|328455007|gb|AEB06201.1| DNA-3-methyladenine glycosylase II [Coriobacterium glomerans PW2]
Length = 305
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 75/251 (29%), Positives = 131/251 (52%), Gaps = 13/251 (5%)
Query: 23 FPPRKIRKLTTITPITKIAEIPVATAISTNSDNSPKIFKPLTFKGEVDIALRHLRDKDPL 82
F P ++ + T T + P ++ IS + + +IF+ GE + A +L +D
Sbjct: 49 FAPARMVAILTAMGTTPLTGSP-SSFISAATADGARIFR----YGEQETA--YLAARDVR 101
Query: 83 LATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNILPDAVL 142
LA ++ A E S+ I+ QQ++ A ++I+ R + + I D +
Sbjct: 102 LAAVMAAVGHIEREIDPDLLSSVIHHIIGQQISTAAQQTIWRR---MHDALGEIDADVIA 158
Query: 143 AVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIGAWSV 202
A ++L+ G+++RKA Y+RDLA + DG E I +DD + L ++KG+G W+
Sbjct: 159 ATPVEELQSFGMTFRKAGYIRDLARQLVDGSFDLEGIRSLDDADAVERLVAIKGVGVWTA 218
Query: 203 HMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSWYMWR 262
M ++F L +PDVL GDLG+++GL++LY + + AL + ++ P SV S Y+W
Sbjct: 219 EMILLFCLERPDVLSYGDLGIQRGLRMLYHHRAISPAL-FKRYRRRFSPCGSVASLYLWA 277
Query: 263 LMEAKGVLPNV 273
+ A G +P +
Sbjct: 278 V--AGGAVPGL 286
>gi|134094512|ref|YP_001099587.1| DNA-3-methyladenine glycosylase II [Herminiimonas arsenicoxydans]
Length = 191
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 62/188 (32%), Positives = 104/188 (55%), Gaps = 4/188 (2%)
Query: 79 KDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNILP 138
+D ++ LI S PF +LA+SI+ QQ++ KAA S++ RF+ + P
Sbjct: 3 RDRIMRKLIPQFGDLHLASRGEPFSTLARSIIGQQISVKAADSVWQRFLEICP---KCTP 59
Query: 139 DAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIG 198
V+ +L G+S RK+ Y+ DLA+ + ++ + EM+D + L ++GIG
Sbjct: 60 VQVIKAG-DKLASCGLSKRKSEYILDLADHFKAKRVNCDKWAEMEDEDVIADLIQIRGIG 118
Query: 199 AWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSW 258
W+ MF+IF+L +P++LP+ D+G+ G+ Y E EV W+PYR+V +W
Sbjct: 119 RWTAEMFLIFNLLRPNILPLDDVGLLAGISRNYFSGEPVSRSDAREVAANWEPYRTVATW 178
Query: 259 YMWRLMEA 266
Y+WR ++A
Sbjct: 179 YLWRSLDA 186
>gi|352082120|ref|ZP_08952943.1| DNA-3-methyladenine glycosylase II [Rhodanobacter sp. 2APBS1]
gi|351682258|gb|EHA65364.1| DNA-3-methyladenine glycosylase II [Rhodanobacter sp. 2APBS1]
Length = 215
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 94/175 (53%), Gaps = 4/175 (2%)
Query: 90 HRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNILPDAVLAVSPQQL 149
H P + +R P+ +L +++ YQQL KA +I R +AL P + +
Sbjct: 30 HEP---KPAREPYEALVRAVAYQQLHVKAGDAILARLLALHPRRAFPSPAQLRDADFDSM 86
Query: 150 REIGVSYRKASYLRDLAEKYTDGILSD-ESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIF 208
R G S RK +R +A G++ D + + + D + L+ +KGIG W+V MF+I+
Sbjct: 87 RACGFSARKIETIRGIAAATLKGVVPDLSAALALPDEELIARLSVLKGIGRWTVEMFLIY 146
Query: 209 SLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSWYMWRL 263
SL +PD+LP D GVR+G ++L L+ P + + W PYR+ +WY+WR+
Sbjct: 147 SLDRPDILPADDFGVREGYRLLKSLETAPTPKALAAIGAAWSPYRTAAAWYLWRV 201
>gi|119505406|ref|ZP_01627480.1| HhH-GPD protein [marine gamma proteobacterium HTCC2080]
gi|119458861|gb|EAW39962.1| HhH-GPD protein [marine gamma proteobacterium HTCC2080]
Length = 215
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 62/160 (38%), Positives = 95/160 (59%), Gaps = 2/160 (1%)
Query: 102 FLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNILPDAVLAVSPQQLREIGVSYRKASY 161
F SLAK ++ QQ++ +AA++I R + NG+ + P+ +L+ LR G+S +K SY
Sbjct: 47 FDSLAKIVVGQQVSTRAAEAITQRLLESLNGQ--LEPEILLSRDDDSLRAAGLSRQKISY 104
Query: 162 LRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDL 221
LR LA +G L + +M D + + +T+++G GAWS M+++FSL + D+ P GDL
Sbjct: 105 LRSLATAVVEGALPLLDLPKMSDDEVLQRITAIRGFGAWSAQMYLMFSLGRTDIWPSGDL 164
Query: 222 GVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSWYMW 261
VR G L GL E P A K EE+ + + PYRS + W
Sbjct: 165 AVRVGFGRLLGLVERPTAKKTEELAKDFTPYRSALALLCW 204
>gi|15837927|ref|NP_298615.1| DNA-3-methyladenine glycosidase [Xylella fastidiosa 9a5c]
gi|9106321|gb|AAF84135.1|AE003965_8 DNA-3-methyladenine glycosidase [Xylella fastidiosa 9a5c]
Length = 216
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/199 (36%), Positives = 104/199 (52%), Gaps = 6/199 (3%)
Query: 72 ALRHLRDKDPLLATLIDAHRP-PTFESSRSPFL---SLAKSILYQQLAYKAAKSIYTRFV 127
A HL DP L+ + P P R PF +LA++IL+QQL+ KAA +I R
Sbjct: 3 AYDHLYHCDPGLSGWMQRLGPLPALRGWRQPFNVVDALARAILFQQLSGKAASTIVARIE 62
Query: 128 ALFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGIL-SDESIVEMDDVT 186
A+ G + + + + LR GVS K LRDL + G L S + M T
Sbjct: 63 AVI-GSACLYAETLACIDDACLRTCGVSSNKILALRDLTRREVAGELPSVRQMGSMHHNT 121
Query: 187 MFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVC 246
+ + L ++GIG W+V M ++F L +PDVLPV DLGVRKG+Q + L +P +
Sbjct: 122 IVEKLIPIRGIGRWTVEMMLMFRLGRPDVLPVDDLGVRKGIQRVDSLAFVPTPKALCTRG 181
Query: 247 EKWKPYRSVGSWYMWRLME 265
E W PYR+ Y+WR+ +
Sbjct: 182 ECWAPYRTYAGLYLWRIAD 200
>gi|150391251|ref|YP_001321300.1| methylated-DNA--protein-cysteine methyltransferase [Alkaliphilus
metalliredigens QYMF]
gi|149951113|gb|ABR49641.1| methylated-DNA--protein-cysteine methyltransferase [Alkaliphilus
metalliredigens QYMF]
Length = 355
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 117/199 (58%), Gaps = 6/199 (3%)
Query: 67 GEVDIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRF 126
G+ +IA +L+ KD L I+ + PF +L SI+ QQ++ KAA++++ R
Sbjct: 162 GQKEIA--YLKKKDKKLGAAIERIGKIERGTIADPFTALISSIVSQQISNKAAETVWNRL 219
Query: 127 VALFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVT 186
L +++ P+++ Q++ G++ +KA Y++ +A+ G ++ +++ + D
Sbjct: 220 DELL---ESMTPESITKTELSQIQGCGMTNKKAEYIKGIADVALCGKINFKTLHMLSDQE 276
Query: 187 MFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVC 246
+ + L+S+ G+G W+V M +IFSL++P+V+ GDL +R+G+ LYGLKEL + +
Sbjct: 277 IIQKLSSLHGVGIWTVEMLLIFSLNRPNVVSYGDLAIRRGMMNLYGLKELSKE-QFNQYR 335
Query: 247 EKWKPYRSVGSWYMWRLME 265
K+ PY SV S Y+W + E
Sbjct: 336 AKYAPYGSVASLYLWVMSE 354
>gi|321257031|ref|XP_003193444.1| DNA-3-methyladenine glycosidase [Cryptococcus gattii WM276]
gi|317459914|gb|ADV21657.1| DNA-3-methyladenine glycosidase, putative [Cryptococcus gattii
WM276]
Length = 461
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/190 (38%), Positives = 105/190 (55%), Gaps = 7/190 (3%)
Query: 44 PVATAISTNSDNSPKIFKPLTFKGEVDIALRHLRDKDPLLATLID--AHRPPTFESSRSP 101
P +TA+ + P + P T ++ A+ HL DP + + RP + P
Sbjct: 71 PPSTALDLLTVPQPTLLPP-TLNFDLLSAISHLSALDPRFSLFFEHLPCRPFVNLEAIDP 129
Query: 102 FLSLAKSILYQQLAYKAAKSIYTRFVALFN----GEDNILPDAVLAVSPQQLREIGVSYR 157
F +L SI+ QQ+++ AA++I TRF ALF E P VL+ LR +G+S R
Sbjct: 130 FRTLVTSIIGQQVSWMAARAINTRFRALFGFTHEREGFPSPQMVLSQDVASLRGVGLSGR 189
Query: 158 KASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLP 217
KA Y+ LA+ + G LS + D + K L +V+GIG W+V MFMIFSL +PD+L
Sbjct: 190 KAEYVLSLADHFASGQLSTHLLQSGTDEEISKALIAVRGIGQWTVDMFMIFSLRRPDILA 249
Query: 218 VGDLGVRKGL 227
VGDLGV+KGL
Sbjct: 250 VGDLGVQKGL 259
>gi|71274870|ref|ZP_00651158.1| HhH-GPD [Xylella fastidiosa Dixon]
gi|71164602|gb|EAO14316.1| HhH-GPD [Xylella fastidiosa Dixon]
gi|71729006|gb|EAO31136.1| HhH-GPD [Xylella fastidiosa Ann-1]
Length = 226
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/203 (36%), Positives = 106/203 (52%), Gaps = 6/203 (2%)
Query: 68 EVDIALRHLRDKDPLLATLIDAHRP-PTFESSRSPFL---SLAKSILYQQLAYKAAKSIY 123
+V A HL DP L+ + P P R PF +LA++IL+QQL+ KAA +I
Sbjct: 9 DVVAAYDHLYHCDPGLSGWMQRLGPLPALRGWRQPFNVVDALARAILFQQLSGKAASTIV 68
Query: 124 TRFVALFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGIL-SDESIVEM 182
R A+ G + + + + LR GVS K LRDL + G L S + M
Sbjct: 69 ARIEAVI-GSTCLYAETLACIDDACLRACGVSSNKILALRDLTRREVAGELPSVRQMGAM 127
Query: 183 DDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKM 242
T+ + L ++GIG W+V M ++F L +PDVLPV DLGVRKG+Q + L +P +
Sbjct: 128 HHNTIVEKLIPIRGIGRWTVEMMLMFRLGRPDVLPVDDLGVRKGIQRVDSLAFVPTPKAL 187
Query: 243 EEVCEKWKPYRSVGSWYMWRLME 265
E W PYR+ Y+WR+ +
Sbjct: 188 CTRGECWAPYRTYAGLYLWRIAD 210
>gi|403418761|emb|CCM05461.1| predicted protein [Fibroporia radiculosa]
Length = 459
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/140 (42%), Positives = 90/140 (64%), Gaps = 13/140 (9%)
Query: 101 PFLSLAKSILYQQLAYKAAKSIYTRFVALFN--------GEDNI---LPDA--VLAVSPQ 147
PF +LA SI+ QQ+++ AA++I +F+ LF+ N+ P A V +
Sbjct: 128 PFRTLANSIMGQQISWLAARAIIHKFIRLFDPSLPEKPVDHSNVSTFFPTAHQVSEMDLS 187
Query: 148 QLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMI 207
LR G+S RKA Y+ DLA +++DG LS + ++E +D ++ ML VKGIG W+V MF +
Sbjct: 188 ILRTAGLSGRKAEYIHDLASRFSDGRLSTQKLLEANDEDLYDMLIEVKGIGRWTVDMFAL 247
Query: 208 FSLHKPDVLPVGDLGVRKGL 227
FSL +PD+LPVGDLGV++G+
Sbjct: 248 FSLRRPDILPVGDLGVQRGV 267
Score = 44.3 bits (103), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 28/40 (70%), Gaps = 4/40 (10%)
Query: 230 LYGLKELPGAL----KMEEVCEKWKPYRSVGSWYMWRLME 265
L G K++ GAL +MEE+ + W+PYRS+G +YMW L +
Sbjct: 417 LDGKKKIKGALLTPKEMEELTDSWRPYRSLGVYYMWALAD 456
>gi|359727612|ref|ZP_09266308.1| DNA-3-methyladenine glycosylase II [Leptospira weilii str.
2006001855]
gi|417779371|ref|ZP_12427163.1| base excision DNA repair protein, HhH-GPD family [Leptospira weilii
str. 2006001853]
gi|410780706|gb|EKR65293.1| base excision DNA repair protein, HhH-GPD family [Leptospira weilii
str. 2006001853]
Length = 228
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 108/186 (58%), Gaps = 1/186 (0%)
Query: 76 LRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDN 135
LR KDP+ LID+ P ++ +P+ L KS+L QQL+ K A + R ++L +
Sbjct: 34 LRKKDPITKKLIDSIGPCKLKTIGNPYQVLIKSVLGQQLSVKVALTFERRLISLAGSKKI 93
Query: 136 ILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVK 195
PD ++ + ++L++IGVS K ++ +AE Y + ++D + +++D + +L S+K
Sbjct: 94 PSPDQIVTIPNEKLKKIGVSQAKTETIKRIAEAYLNRDITDSKLRKLEDSDVLNLLCSLK 153
Query: 196 GIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSV 255
G+G W+ M +IF+L + D + DL +RK ++ YG+ + +++ + P+R++
Sbjct: 154 GVGPWTAEMVLIFALDRWDHFSINDLILRKSVEKHYGISK-DNKKEIQHFLMSYSPFRTI 212
Query: 256 GSWYMW 261
SWY+W
Sbjct: 213 LSWYLW 218
>gi|392965885|ref|ZP_10331304.1| HhH-GPD family protein [Fibrisoma limi BUZ 3]
gi|387844949|emb|CCH53350.1| HhH-GPD family protein [Fibrisoma limi BUZ 3]
Length = 215
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/202 (34%), Positives = 113/202 (55%), Gaps = 15/202 (7%)
Query: 79 KDPLLATLIDAHRP---PTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDN 135
+DP+ A +I A P P ++ +L+L +SI+ QQ++ KAA +I+ R + LF DN
Sbjct: 8 QDPVFARII-AETPAPKPFYDWENDIYLALLESIVSQQISTKAADAIFRRLLGLF--PDN 64
Query: 136 I-LPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSV 194
P+A+LA S +LR G+S++K YL+ +AE + M D + + L +
Sbjct: 65 YPHPNALLAKSTDELRSAGLSFQKIKYLQSVAEFALTNRMDRPFFDTMTDEEIVQYLIPI 124
Query: 195 KGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLY-----GLKELPGALKMEEVCEKW 249
KG+G W+V M ++F L +PDV PV DL +R+ + Y GL ++ E+ E W
Sbjct: 125 KGVGRWTVEMLLMFVLDRPDVFPVDDLVIRQSMLRAYADQTAGLTGKALYRRLHEIAEPW 184
Query: 250 KPYRSVGSWYMWRLMEAKGVLP 271
+P+R++ Y+WR KGV+P
Sbjct: 185 RPHRTLACRYLWRW---KGVVP 203
>gi|400593931|gb|EJP61821.1| HhH-GPD superfamily base excision DNA repair protein [Beauveria
bassiana ARSEF 2860]
Length = 411
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/217 (33%), Positives = 106/217 (48%), Gaps = 23/217 (10%)
Query: 72 ALRHLRDKDPLLATLIDAH-----RPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRF 126
A HL D + LI+ H P PF S+ I+ QQ++ AAKSI +F
Sbjct: 188 ACDHLIRVDERMRPLIEKHTCRVFSPEGLAEEVDPFESITSGIISQQVSGAAAKSIKNKF 247
Query: 127 VALFNGEDN-------ILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESI 179
+ LF + P V A + LR G+S RKA Y+ LA ++T G LS + +
Sbjct: 248 IMLFAATSDGDATPRFPHPSKVAATPLETLRTAGLSQRKAEYIHGLAARFTSGELSAQML 307
Query: 180 VEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYG-----LK 234
+ + L +V+G+G WSV MF F L + DV +GDLGV++G+ G L+
Sbjct: 308 QDAPYDEVLAKLLAVRGLGRWSVEMFACFGLKRMDVFSLGDLGVQRGMAAFAGRDVAKLR 367
Query: 235 ELPGALK------MEEVCEKWKPYRSVGSWYMWRLME 265
G K M + +++ PYRS+ WYMWR+ E
Sbjct: 368 NKGGKWKYMSEQDMVAMSDRFAPYRSLFMWYMWRVEE 404
>gi|336236759|ref|YP_004589375.1| DNA-3-methyladenine glycosylase II [Geobacillus thermoglucosidasius
C56-YS93]
gi|335363614|gb|AEH49294.1| DNA-3-methyladenine glycosylase II [Geobacillus thermoglucosidasius
C56-YS93]
Length = 288
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 58/169 (34%), Positives = 97/169 (57%), Gaps = 5/169 (2%)
Query: 102 FLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNIL-----PDAVLAVSPQQLREIGVSY 156
+ L K +++QQL K A + RFV F + + P+ + A+S +L+++ +S
Sbjct: 120 YFCLMKCLIHQQLNLKVASRLTERFVQTFGTQIGGVWFYPRPEDIAALSYDELKQLQLSG 179
Query: 157 RKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVL 216
RKA Y+ D + +G LS E + + + L SV+GIG W+V F++F L + +V
Sbjct: 180 RKAEYIIDTSRLIAEGKLSLEELARKSEAEAMEALLSVRGIGPWTVQNFLLFGLGRRNVF 239
Query: 217 PVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSWYMWRLME 265
P D+G+++ +Q L GL E P +MEE+ ++W+PY S S Y+WR +E
Sbjct: 240 PKADIGLQRAVQRLLGLSERPSMKQMEELSKRWEPYLSYASLYLWRSIE 288
>gi|170729879|ref|YP_001775312.1| DNA-3-methyladenine glycosidase [Xylella fastidiosa M12]
gi|167964672|gb|ACA11682.1| DNA-3-methyladenine glycosidase [Xylella fastidiosa M12]
Length = 226
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/203 (36%), Positives = 106/203 (52%), Gaps = 6/203 (2%)
Query: 68 EVDIALRHLRDKDPLLATLIDAHRP-PTFESSRSPFL---SLAKSILYQQLAYKAAKSIY 123
+V A HL DP L+ + P P R PF +LA++IL+QQL+ KAA +I
Sbjct: 9 DVVAAYDHLYHCDPGLSGWMQRLGPLPALRGWRQPFNVVDALARAILFQQLSGKAASTIV 68
Query: 124 TRFVALFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGIL-SDESIVEM 182
R A+ G + + + + LR GVS K LRDL + G L S + M
Sbjct: 69 ARIEAVI-GSTCLYAETLACIDDACLRACGVSSNKILALRDLTRREVAGELPSVRQMGAM 127
Query: 183 DDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKM 242
T+ + L ++GIG W+V M ++F L +PDVLPV DLGVRKG+Q + L +P +
Sbjct: 128 HHNTIVEKLIPIRGIGRWTVEMMLMFRLGRPDVLPVDDLGVRKGIQRVDTLAFVPTPKAL 187
Query: 243 EEVCEKWKPYRSVGSWYMWRLME 265
E W PYR+ Y+WR+ +
Sbjct: 188 CTRGECWAPYRTYAGLYLWRIAD 210
>gi|299533877|ref|ZP_07047244.1| HhH-GPD [Comamonas testosteroni S44]
gi|298718161|gb|EFI59151.1| HhH-GPD [Comamonas testosteroni S44]
Length = 274
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/203 (33%), Positives = 112/203 (55%), Gaps = 11/203 (5%)
Query: 72 ALRHLRDKDPLLATLI-----DAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRF 126
A R L +D +L LI A P E + F +LA SI+ QQ++ K+AK+++ +F
Sbjct: 77 ACRQLMRRDRVLKRLIPQLGSQALLPCGQEQA---FATLAWSIIGQQISAKSAKTLWNKF 133
Query: 127 VALFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVT 186
V L + P+ VL + +R +G+S RK YL DLA +T+ L + +M D
Sbjct: 134 VRLPAA---MQPEQVLRLKVDDMRAVGLSARKVDYLVDLALHFTENRLHMDEWAQMSDEV 190
Query: 187 MFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVC 246
+ L S++G+ W+ F+I+ L +P+VLP+ D G+ +G+ + + + EV
Sbjct: 191 IIAELMSIRGLSRWTAENFLIYCLGRPNVLPLDDAGLIQGISLNHFSGDPVSRSDAREVA 250
Query: 247 EKWKPYRSVGSWYMWRLMEAKGV 269
E WKP+ +V +WY+WR +EA+ V
Sbjct: 251 EAWKPWCTVATWYIWRSLEAQPV 273
>gi|257388117|ref|YP_003177890.1| HhH-GPD family protein [Halomicrobium mukohataei DSM 12286]
gi|257170424|gb|ACV48183.1| HhH-GPD family protein [Halomicrobium mukohataei DSM 12286]
Length = 202
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/184 (35%), Positives = 102/184 (55%), Gaps = 6/184 (3%)
Query: 79 KDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNILP 138
+DP L L++ H T + F + SI+ QQ++ +A + R LF+ + + P
Sbjct: 10 EDPDLGPLVETHGELTISPAEDLFARILTSIVRQQVSMASAAATRER---LFDAVE-VTP 65
Query: 139 DAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIG 198
VLA LR+ G+S +K Y+ ++A + + LS +MDD + LTS+ G+G
Sbjct: 66 SGVLAADDDVLRDAGLSRQKTRYVNNVASAFEERGLSRTYFEDMDDDAVVDELTSITGVG 125
Query: 199 AWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSW 258
W+ +M ++FSL + DV PVGDLG+R G+ L E+ A +M E+W+PYRS S
Sbjct: 126 EWTANMQLVFSLGREDVFPVGDLGIRTGMASLVD-PEMTRA-EMSAYAERWEPYRSYASL 183
Query: 259 YMWR 262
Y+WR
Sbjct: 184 YLWR 187
>gi|448630092|ref|ZP_21672853.1| DNA-3-methyladenine glycosylase [Haloarcula vallismortis ATCC
29715]
gi|445756724|gb|EMA08086.1| DNA-3-methyladenine glycosylase [Haloarcula vallismortis ATCC
29715]
Length = 203
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 61/186 (32%), Positives = 102/186 (54%), Gaps = 6/186 (3%)
Query: 80 DPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNILPD 139
DP + TL++ H T + + F L SIL QQ++ +A + R LF+ + P
Sbjct: 12 DPDIGTLVENHGELTLDPASDLFERLVVSILRQQVSMASAAATRER---LFDAV-TVTPA 67
Query: 140 AVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIGA 199
+ + LR+ G+S +K Y+ ++A+ + + S E+ + D + + LT++ G+G
Sbjct: 68 GIREADNELLRDAGLSRQKTRYVNEVADTFLEENYSLEAFADATDEEIREALTAITGVGD 127
Query: 200 WSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSWY 259
W+ +M ++F+ + DV PVGDLG+RKG + + G E +M E E+W PYRS S Y
Sbjct: 128 WTANMQLLFAFGREDVFPVGDLGIRKGFEAVVG--EGYSRAEMREYAERWSPYRSYASLY 185
Query: 260 MWRLME 265
+WR E
Sbjct: 186 LWRASE 191
>gi|330998822|ref|ZP_08322549.1| base excision DNA repair protein, HhH-GPD family [Parasutterella
excrementihominis YIT 11859]
gi|329576036|gb|EGG57555.1| base excision DNA repair protein, HhH-GPD family [Parasutterella
excrementihominis YIT 11859]
Length = 217
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/201 (32%), Positives = 110/201 (54%), Gaps = 12/201 (5%)
Query: 70 DIALRHLRDKDPLLATLIDAHRPPTFESSR-SPFLSLAKSILYQQLAYKAAKSIYTRFVA 128
D A + L + DP++A +I A+ P F ++R +PF +L +S++ QQ++ KAA +I+ RF
Sbjct: 12 DQAKKELSEADPVMAQIIRAN-PEGFLATRGNPFETLLRSVIGQQISVKAAANIWERFA- 69
Query: 129 LFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMF 188
I P+ + + LR G+S RK Y+ D+ + + + + + +
Sbjct: 70 --KACKEIKPEIITRKHRRTLRTAGLSERKIEYVFDICRFFLENPDAADGFQHRSNEEVI 127
Query: 189 KMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLY----GLKELPGALKMEE 244
K L ++KG+G W+ MF+IF+L +PDV P+ D G K + Y +E A + EE
Sbjct: 128 KELCTIKGVGPWTAEMFLIFALRRPDVAPMLDYGFIKAVGQAYFPEIAFEEWSAADRKEE 187
Query: 245 ---VCEKWKPYRSVGSWYMWR 262
V KW P+++ G+WY+WR
Sbjct: 188 MSSVIAKWGPWKTAGTWYLWR 208
>gi|358065198|ref|ZP_09151748.1| hypothetical protein HMPREF9473_03811 [Clostridium hathewayi
WAL-18680]
gi|356696744|gb|EHI58353.1| hypothetical protein HMPREF9473_03811 [Clostridium hathewayi
WAL-18680]
Length = 213
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 64/197 (32%), Positives = 115/197 (58%), Gaps = 10/197 (5%)
Query: 67 GEVDIALRHLRDKDPLLATLIDAHRPPTFESSRSP--FLSLAKSILYQQLAYKAAKSIYT 124
GE +I ++L +KD +L I+ + E +P F +L SI+ QQ++ KA ++I+
Sbjct: 7 GEREI--QYLTEKDKVLGEAIE--KIGHVERKVNPDLFGALVSSIVDQQISTKAGQTIWK 62
Query: 125 RFVALFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDD 184
R + +G + P+ + ++L+ G+S+RK Y+++ A K DG L+ E++ M D
Sbjct: 63 R---MCDGLSEVTPETIGKCPVEELQAFGISFRKVEYIKNAARKVLDGELNLEALHTMSD 119
Query: 185 VTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEE 244
+ + L+S+KG+G W+ M M FS+ +PDV GDL + +GL++LY +++ L E+
Sbjct: 120 EEVCRELSSLKGVGVWTAEMLMTFSMQRPDVFSFGDLAIHRGLRMLYHHRKIDKKL-FEK 178
Query: 245 VCEKWKPYRSVGSWYMW 261
++ PY +V S Y+W
Sbjct: 179 YRRRYSPYGTVASLYLW 195
>gi|303256927|ref|ZP_07342941.1| 3-methyladenine DNA glycosylase II [Burkholderiales bacterium
1_1_47]
gi|302860418|gb|EFL83495.1| 3-methyladenine DNA glycosylase II [Burkholderiales bacterium
1_1_47]
Length = 224
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/201 (32%), Positives = 110/201 (54%), Gaps = 12/201 (5%)
Query: 70 DIALRHLRDKDPLLATLIDAHRPPTFESSR-SPFLSLAKSILYQQLAYKAAKSIYTRFVA 128
D A + L + DP++A +I A+ P F ++R +PF +L +S++ QQ++ KAA +I+ RF
Sbjct: 19 DQAKKELSEADPVMAQIIRAN-PEGFLATRGNPFETLLRSVIGQQISVKAAANIWERFA- 76
Query: 129 LFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMF 188
I P+ + + LR G+S RK Y+ D+ + + + + + +
Sbjct: 77 --KACKEIKPEIITRKHRRTLRTAGLSERKIEYVFDICRFFLENPDAADGFQHRSNEEII 134
Query: 189 KMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLY----GLKELPGALKMEE 244
K L ++KG+G W+ MF+IF+L +PDV P+ D G K + Y +E A + EE
Sbjct: 135 KELCTIKGVGPWTAEMFLIFALRRPDVAPMLDYGFIKAVGQAYFPEIAFEEWSAADRKEE 194
Query: 245 ---VCEKWKPYRSVGSWYMWR 262
V KW P+++ G+WY+WR
Sbjct: 195 MSSVIAKWGPWKTAGTWYLWR 215
>gi|352101586|ref|ZP_08958822.1| DNA repair protein [Halomonas sp. HAL1]
gi|350600425|gb|EHA16491.1| DNA repair protein [Halomonas sp. HAL1]
Length = 204
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 104/197 (52%), Gaps = 11/197 (5%)
Query: 69 VDIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVA 128
++ A++ L DP +A PP F + +I+ QQL+ +AA++I R
Sbjct: 7 IEQAMQALAQADPDIARAYPLVGPPGPRQRDQGFATFFSTIISQQLSTEAARAIMGRV-- 64
Query: 129 LFNGEDNILPD----AVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDD 184
+ +LP+ AV+ V Q LR+ G+S+RK Y + LAE G S + + + D
Sbjct: 65 -----NTLLPELHAKAVMDVEGQALRDAGLSWRKIEYAKGLAEAELAGTFSADGLEHLSD 119
Query: 185 VTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEE 244
+ +T ++G G WS ++++FSL +PDV P DL +R L L G+ + P + +
Sbjct: 120 EEVIAAITELRGFGRWSAEIYLMFSLKRPDVFPADDLALRVALGRLKGMDDKPTPKQARQ 179
Query: 245 VCEKWKPYRSVGSWYMW 261
+ E W P+RSVGS ++W
Sbjct: 180 LVEHWAPWRSVGSLFLW 196
>gi|116329013|ref|YP_798733.1| DNA-3-methyladenine glycosylase II [Leptospira borgpetersenii
serovar Hardjo-bovis str. L550]
gi|116330379|ref|YP_800097.1| DNA-3-methyladenine glycosylase II [Leptospira borgpetersenii
serovar Hardjo-bovis str. JB197]
gi|116121757|gb|ABJ79800.1| DNA-3-methyladenine glycosylase II [Leptospira borgpetersenii
serovar Hardjo-bovis str. L550]
gi|116124068|gb|ABJ75339.1| DNA-3-methyladenine glycosylase II [Leptospira borgpetersenii
serovar Hardjo-bovis str. JB197]
Length = 228
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 109/191 (57%), Gaps = 1/191 (0%)
Query: 76 LRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDN 135
LR KDP+ L+D+ P ++ +P+ L KS+L QQL+ K A + R ++L +
Sbjct: 34 LRKKDPITKKLVDSIGPCKLQTIGNPYQVLIKSVLGQQLSVKVALTFERRLISLAGSKKI 93
Query: 136 ILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVK 195
PD +L + ++L++IGVS K ++ +AE Y + ++D + +++D + +L S K
Sbjct: 94 PPPDRILMIPNEELKKIGVSQAKIETIQRIAEAYLNRDITDSKLRKLEDSDVLNLLCSFK 153
Query: 196 GIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSV 255
G+G W+ M +IF+L + D + DL +RK ++ YG+ + +++ + P+R++
Sbjct: 154 GVGPWTAEMVLIFALDRWDHFSINDLILRKSVEKHYGISK-DNKKEIQHFLMSYSPFRTI 212
Query: 256 GSWYMWRLMEA 266
SWY+W M+
Sbjct: 213 LSWYLWADMDG 223
>gi|373857736|ref|ZP_09600476.1| HhH-GPD family protein [Bacillus sp. 1NLA3E]
gi|372452407|gb|EHP25878.1| HhH-GPD family protein [Bacillus sp. 1NLA3E]
Length = 288
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 64/197 (32%), Positives = 99/197 (50%), Gaps = 7/197 (3%)
Query: 74 RHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGE 133
RH + L L H P+ L K I++QQL A ++ TRFV F E
Sbjct: 94 RHFQKTQ--LKDLFSEHYGTPLVLDFDPYGCLLKCIIHQQLNMAFAHTLSTRFVKTFGFE 151
Query: 134 -DNIL----PDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMF 188
D + P+ V + +QLRE+ S RKA Y+ + + G L+ E I ++ D +
Sbjct: 152 VDGVWFYPRPEVVAGIEVEQLRELQFSGRKAEYVIGIGKAIAQGELNLEKIKQLSDEEIL 211
Query: 189 KMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEK 248
L ++G+G W+V F++F L +P++ P+ D+G++ L+ LY L P +ME
Sbjct: 212 AQLVKLRGVGPWTVQNFLMFGLGRPNLFPIADIGIQNALKKLYNLDRKPTEEEMENFKLG 271
Query: 249 WKPYRSVGSWYMWRLME 265
W PY S S Y+WR +E
Sbjct: 272 WDPYLSYASLYLWRSIE 288
>gi|312112310|ref|YP_003990626.1| HhH-GPD family protein [Geobacillus sp. Y4.1MC1]
gi|311217411|gb|ADP76015.1| HhH-GPD family protein [Geobacillus sp. Y4.1MC1]
Length = 288
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 58/169 (34%), Positives = 97/169 (57%), Gaps = 5/169 (2%)
Query: 102 FLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNIL-----PDAVLAVSPQQLREIGVSY 156
+ L K +++QQL K A + RFV F + + P+ + A+S +L+++ +S
Sbjct: 120 YFCLMKCLIHQQLNLKVASRLTERFVQTFGTQIGGVWFYPRPEDIAALSYDELKQLQLSG 179
Query: 157 RKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVL 216
RKA Y+ D + +G LS E + + + L SV+GIG W+V F++F L + +V
Sbjct: 180 RKAEYIIDTSRLIAEGKLSLEELARKSEAEAMEALLSVRGIGPWTVQNFLLFGLGRRNVF 239
Query: 217 PVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSWYMWRLME 265
P D+G+++ +Q L GL E P +MEE+ ++W+PY S S Y+WR +E
Sbjct: 240 PKADIGLQRAVQRLLGLSERPSMKQMEELSKRWEPYLSYASLYLWRSIE 288
>gi|423721235|ref|ZP_17695417.1| 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase
[Geobacillus thermoglucosidans TNO-09.020]
gi|383365606|gb|EID42899.1| 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase
[Geobacillus thermoglucosidans TNO-09.020]
Length = 288
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 58/169 (34%), Positives = 97/169 (57%), Gaps = 5/169 (2%)
Query: 102 FLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNIL-----PDAVLAVSPQQLREIGVSY 156
+ L K +++QQL K A + RFV F + + P+ + A+S +L+++ +S
Sbjct: 120 YFCLMKCLIHQQLNLKVATRLTERFVQTFGTQIGGVWFYPRPEDIAALSYDELKQLQLSG 179
Query: 157 RKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVL 216
RKA Y+ D + +G LS E + + + L SV+GIG W+V F++F L + +V
Sbjct: 180 RKAEYIIDTSRLIAEGKLSLEELARKSEAEAMEALLSVRGIGPWTVQNFLLFGLGRRNVF 239
Query: 217 PVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSWYMWRLME 265
P D+G+++ +Q L GL E P +MEE+ ++W+PY S S Y+WR +E
Sbjct: 240 PKADIGLQRAVQRLLGLSERPSMKQMEELSKRWEPYLSYASLYLWRSIE 288
>gi|297624911|ref|YP_003706345.1| HhH-GPD family protein [Truepera radiovictrix DSM 17093]
gi|297166091|gb|ADI15802.1| HhH-GPD family protein [Truepera radiovictrix DSM 17093]
Length = 208
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 66/198 (33%), Positives = 110/198 (55%), Gaps = 11/198 (5%)
Query: 72 ALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFN 131
AL HL+ DP +ATL+ P + P+ L ++I+ Q ++ AA+++Y R A
Sbjct: 17 ALAHLQ-TDPTMATLVARFGPYGWRLG-EPYRVLVRAIVGQLISGAAARAVYGRLQA--- 71
Query: 132 GEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKML 191
++ P+ +L + L +GV RK YLR+L+ Y + E + D + L
Sbjct: 72 -ATDLDPERLLTCTTDDLLALGVPRRKGEYLRELSAAYL--GGALEGLAGGSDADVLARL 128
Query: 192 TSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKP 251
T+++G+G W+ MF+IF+L +PDV P+ D+GV + + LYG +P + E+ ++ P
Sbjct: 129 TALRGVGVWTAEMFLIFALGRPDVWPLKDMGVVRAGEGLYGAFGVP---ALSELGARFAP 185
Query: 252 YRSVGSWYMWRLMEAKGV 269
YRS WY+WR +EA G+
Sbjct: 186 YRSAAVWYLWRWIEAGGL 203
>gi|427727520|ref|YP_007073757.1| HhH-GPD superfamily base excision DNA repair protein [Nostoc sp.
PCC 7524]
gi|427363439|gb|AFY46160.1| HhH-GPD superfamily base excision DNA repair protein [Nostoc sp.
PCC 7524]
Length = 240
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 114/216 (52%), Gaps = 4/216 (1%)
Query: 47 TAISTNSDNSPKIFKPLTFKGEVDIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLA 106
T I+ + N K + LT + + AL L D LA ++ P + F +L
Sbjct: 23 TPITKTTMNLEKELESLTPES-FNYALNMLAQIDSDLAHVLAVLGNPPLWNREPGFPTLV 81
Query: 107 KSILYQQLAYKAAKSIYTRFVALFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLA 166
+ IL QQ++ AA++++ R + P+ L +QL+ IG S +K+ Y R+LA
Sbjct: 82 QIILEQQVSLAAAQAVFNRLSQTVTP---LTPNNFLTFDHEQLKAIGFSRQKSLYCRELA 138
Query: 167 EKYTDGILSDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKG 226
+ +G L+ + MDD T+ L +KGIG W+V ++++ +L +PD P GDLG+
Sbjct: 139 DAIVNGQLNLTQLESMDDRTIRNQLKLIKGIGDWTVDIYLLMALKRPDAFPKGDLGLVIA 198
Query: 227 LQVLYGLKELPGALKMEEVCEKWKPYRSVGSWYMWR 262
Q L GL E P +++E + + W+P+R+V + +W
Sbjct: 199 TQKLKGLAERPTPIQLEAIAQNWRPWRAVAARILWH 234
>gi|311029128|ref|ZP_07707218.1| YfjP [Bacillus sp. m3-13]
Length = 293
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 62/188 (32%), Positives = 100/188 (53%), Gaps = 5/188 (2%)
Query: 83 LATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNIL----- 137
LAT+ H + L K I++QQ+ K A ++ RFV F E +
Sbjct: 98 LATIFQEHEGTPLVLDFDLYHCLMKCIIHQQVNMKFAHTLTQRFVHTFGFEKEGVWFYPK 157
Query: 138 PDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGI 197
P+ V + +Q+ E+ +S RKA Y+ D ++ G L S+ M D + K L V+GI
Sbjct: 158 PEDVATLDYEQITELKMSRRKAEYIIDTSKLIASGELPLYSLDNMSDEEILKKLIKVRGI 217
Query: 198 GAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGS 257
G W+V ++F L +P++ P+ D+G++ L+ L GL + P L+M+E + W+PY S S
Sbjct: 218 GPWTVQNLLLFGLGRPNLFPIADIGIQNALKKLKGLDQKPTVLQMQEWAKDWEPYLSYAS 277
Query: 258 WYMWRLME 265
Y+WR +E
Sbjct: 278 LYLWRSIE 285
>gi|302500252|ref|XP_003012120.1| hypothetical protein ARB_01628 [Arthroderma benhamiae CBS 112371]
gi|291175676|gb|EFE31480.1| hypothetical protein ARB_01628 [Arthroderma benhamiae CBS 112371]
Length = 398
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 78/239 (32%), Positives = 108/239 (45%), Gaps = 48/239 (20%)
Query: 72 ALRHLRDKDPLLATLIDAH-----RPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRF 126
A+ HL DP L +ID RP PF +L I+ QQ++ AAKSI ++F
Sbjct: 149 AIAHLLSVDPRLKPVIDKFPDAPFRPADLAVEIDPFQALVSGIIGQQVSGAAAKSIKSKF 208
Query: 127 VALFNGEDNILPDAVLAV-----------------------SPQQ--------LREIGVS 155
++LF+ V SPQQ LR G+S
Sbjct: 209 ISLFSATTTTTTTTDTQVEADGDDEDEVGDAGLRYKPVPFPSPQQVVSMDIPTLRTAGLS 268
Query: 156 YRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDV 215
RKA Y+ LA+K+ G LS ++ D + L +V+G+G WSV MF++F L + DV
Sbjct: 269 QRKAEYIHGLADKFASGELSARMLLTASDEEVLDKLIAVRGLGKWSVEMFLLFGLKRMDV 328
Query: 216 LPVGDLGVRKGLQVLYG-----LKELPGA-------LKMEEVCEKWKPYRSVGSWYMWR 262
GDLGV++G+ G LK G M E+ + PYRS+ WYMWR
Sbjct: 329 FSTGDLGVQRGMAAFAGRDVSKLKAKGGGKFKYMSEKDMVEIAAPFSPYRSLFMWYMWR 387
>gi|410448475|ref|ZP_11302549.1| base excision DNA repair protein, HhH-GPD family [Leptospira sp.
Fiocruz LV3954]
gi|410017545|gb|EKO79603.1| base excision DNA repair protein, HhH-GPD family [Leptospira sp.
Fiocruz LV3954]
Length = 226
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 108/196 (55%), Gaps = 5/196 (2%)
Query: 70 DIALRH----LRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTR 125
DI LR LR KDP+ LID+ P + +P+ L KS+L QQL+ K A + R
Sbjct: 22 DIRLRKASDWLRKKDPITKKLIDSVGPCKLRTIGTPYQVLIKSVLGQQLSVKVALTFERR 81
Query: 126 FVALFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDV 185
++L P+ +L + +L+EIGVS K ++ +AE Y+ ++D + +++D
Sbjct: 82 LISLAGSRKIPPPNRILTIPNGKLKEIGVSRAKTETIKRIAEAYSIRNITDSKLRKLEDS 141
Query: 186 TMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEV 245
+ +L S KG+G W+ M +IF+L + D + DL +RK ++ YG+ + +++
Sbjct: 142 DVLNLLCSFKGVGPWTAEMVLIFALDRWDHFSINDLILRKSVEKHYGISK-DNKKEIQRF 200
Query: 246 CEKWKPYRSVGSWYMW 261
+ P+R++ SWY+W
Sbjct: 201 LTDYSPFRTILSWYLW 216
>gi|253995509|ref|YP_003047573.1| DNA-3-methyladenine glycosylase II [Methylotenera mobilis JLW8]
gi|253982188|gb|ACT47046.1| DNA-3-methyladenine glycosylase II [Methylotenera mobilis JLW8]
Length = 202
Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 107/191 (56%), Gaps = 5/191 (2%)
Query: 76 LRDKDPLLATLIDAHRPPTF--ESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGE 133
LR D A LID F +S R P+ +L +++ YQQL+ KA +I + + +
Sbjct: 12 LRAIDNDWAQLIDQVGTCKFTTKSERDPYEALVRAVAYQQLSTKAGDAILKKLINHYGHF 71
Query: 134 DNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVE-MDDVTMFKMLT 192
P +L + +LR +G S RK L+ +A G++ +++ + M + T+ + +T
Sbjct: 72 PA--PPQLLTTTFDELRAVGFSGRKIETLQGIASAALSGLVPTQALTDNMSNETLIQQIT 129
Query: 193 SVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPY 252
++KGIG W+V M ++F+L + D+LP D G+ +G + L L+ P +M E+ W PY
Sbjct: 130 TIKGIGQWTVEMMLMFTLARMDILPADDFGIVEGYKRLKKLEVAPKRKQMAEIGLAWSPY 189
Query: 253 RSVGSWYMWRL 263
R+V SWY+W++
Sbjct: 190 RTVASWYLWQV 200
>gi|288957477|ref|YP_003447818.1| DNA glycosylase [Azospirillum sp. B510]
gi|288909785|dbj|BAI71274.1| DNA glycosylase [Azospirillum sp. B510]
Length = 208
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 108/192 (56%), Gaps = 3/192 (1%)
Query: 71 IALRHLRDKDPLLATLIDAHRPPTFESSR-SPFLSLAKSILYQQLAYKAAKSIYTRFVAL 129
+++ +L DP+ A + P + R + F+ L + ++ QQL+ K A +++ +
Sbjct: 1 MSIAYLAALDPIFAECLRVGGPVIRDFVRPTGFVGLLRMVMEQQLSTKVALALWAKLQER 60
Query: 130 FNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFK 189
G + P+A+LA+ + LR G S +K Y R LAE G+L + I ++ D
Sbjct: 61 VGG--PVTPEAILALDDEALRACGFSRQKIGYARGLAEAAAGGLLDFDIIHDLPDEEAIA 118
Query: 190 MLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKW 249
L ++KGIG WS ++++ +L +PD+ PVGDL ++ G+Q L G + P A ++ EV E W
Sbjct: 119 RLVALKGIGRWSAEVYLMAALDRPDIWPVGDLAIQLGVQRLKGWADRPTAKQLIEVAEPW 178
Query: 250 KPYRSVGSWYMW 261
+PYRS+ + +W
Sbjct: 179 RPYRSLAARLVW 190
>gi|456876308|gb|EMF91420.1| base excision DNA repair protein, HhH-GPD family [Leptospira
santarosai str. ST188]
Length = 226
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 108/196 (55%), Gaps = 5/196 (2%)
Query: 70 DIALRH----LRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTR 125
DI LR LR KDP+ LID+ P + +P+ L KS+L QQL+ K A + R
Sbjct: 22 DIRLRKASDWLRKKDPITKKLIDSVGPCKLRTIGTPYQVLIKSVLGQQLSVKVALTFERR 81
Query: 126 FVALFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDV 185
++L P+ +L + +L+EIGVS K ++ +AE Y+ ++D + +++D
Sbjct: 82 LISLAGSRKIPPPNRILTIPNGKLKEIGVSRAKTETIKRIAEAYSIRNITDSKLRKLEDS 141
Query: 186 TMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEV 245
+ +L S KG+G W+ M +IF+L + D + DL +RK ++ YG+ + +++
Sbjct: 142 DVLNLLCSFKGVGPWTAEMVLIFALDRWDHFSINDLILRKSVEKHYGISK-DNKKEIQRF 200
Query: 246 CEKWKPYRSVGSWYMW 261
+ P+R++ SWY+W
Sbjct: 201 LTGYSPFRTILSWYLW 216
>gi|24212981|ref|NP_710462.1| 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase
[Leptospira interrogans serovar Lai str. 56601]
gi|45656143|ref|YP_000229.1| 3-methyladenine DNA glycosylase [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|386072718|ref|YP_005987035.1| 3-methyladenine DNA glycosylase [Leptospira interrogans serovar Lai
str. IPAV]
gi|417762054|ref|ZP_12410049.1| base excision DNA repair protein, HhH-GPD family [Leptospira
interrogans str. 2002000624]
gi|417771888|ref|ZP_12419780.1| base excision DNA repair protein, HhH-GPD family [Leptospira
interrogans serovar Pomona str. Pomona]
gi|417774556|ref|ZP_12422420.1| base excision DNA repair protein, HhH-GPD family [Leptospira
interrogans str. 2002000621]
gi|417784843|ref|ZP_12432548.1| base excision DNA repair protein, HhH-GPD family [Leptospira
interrogans str. C10069]
gi|418668475|ref|ZP_13229877.1| base excision DNA repair protein, HhH-GPD family [Leptospira
interrogans serovar Pyrogenes str. 2006006960]
gi|418674481|ref|ZP_13235784.1| base excision DNA repair protein, HhH-GPD family [Leptospira
interrogans str. 2002000623]
gi|418683722|ref|ZP_13244917.1| base excision DNA repair protein, HhH-GPD family [Leptospira
interrogans serovar Pomona str. Kennewicki LC82-25]
gi|418689281|ref|ZP_13250403.1| base excision DNA repair protein, HhH-GPD family [Leptospira
interrogans str. FPW2026]
gi|418707665|ref|ZP_13268485.1| base excision DNA repair protein, HhH-GPD family [Leptospira
interrogans serovar Grippotyphosa str. UI 08368]
gi|418713073|ref|ZP_13273800.1| base excision DNA repair protein, HhH-GPD family [Leptospira
interrogans str. UI 08452]
gi|418727020|ref|ZP_13285619.1| base excision DNA repair protein, HhH-GPD family [Leptospira
interrogans str. UI 12621]
gi|421087506|ref|ZP_15548342.1| base excision DNA repair protein, HhH-GPD family [Leptospira
santarosai str. HAI1594]
gi|421104457|ref|ZP_15565052.1| base excision DNA repair protein, HhH-GPD family [Leptospira
interrogans serovar Icterohaemorrhagiae str. Verdun LP]
gi|421114467|ref|ZP_15574885.1| base excision DNA repair protein, HhH-GPD family [Leptospira
interrogans serovar Canicola str. Fiocruz LV133]
gi|421122996|ref|ZP_15583278.1| base excision DNA repair protein, HhH-GPD family [Leptospira
interrogans str. Brem 329]
gi|421124694|ref|ZP_15584951.1| base excision DNA repair protein, HhH-GPD family [Leptospira
interrogans serovar Grippotyphosa str. 2006006986]
gi|421133663|ref|ZP_15593809.1| base excision DNA repair protein, HhH-GPD family [Leptospira
interrogans serovar Grippotyphosa str. Andaman]
gi|24193660|gb|AAN47480.1| 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase
[Leptospira interrogans serovar Lai str. 56601]
gi|45599376|gb|AAS68866.1| 3-methyladenine DNA glycosylase [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|353456507|gb|AER01052.1| 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase
[Leptospira interrogans serovar Lai str. IPAV]
gi|400324471|gb|EJO76765.1| base excision DNA repair protein, HhH-GPD family [Leptospira
interrogans serovar Pomona str. Kennewicki LC82-25]
gi|400361426|gb|EJP17392.1| base excision DNA repair protein, HhH-GPD family [Leptospira
interrogans str. FPW2026]
gi|409942108|gb|EKN87730.1| base excision DNA repair protein, HhH-GPD family [Leptospira
interrogans str. 2002000624]
gi|409946301|gb|EKN96313.1| base excision DNA repair protein, HhH-GPD family [Leptospira
interrogans serovar Pomona str. Pomona]
gi|409951632|gb|EKO06146.1| base excision DNA repair protein, HhH-GPD family [Leptospira
interrogans str. C10069]
gi|409959767|gb|EKO23533.1| base excision DNA repair protein, HhH-GPD family [Leptospira
interrogans str. UI 12621]
gi|410014038|gb|EKO72111.1| base excision DNA repair protein, HhH-GPD family [Leptospira
interrogans serovar Canicola str. Fiocruz LV133]
gi|410022108|gb|EKO88887.1| base excision DNA repair protein, HhH-GPD family [Leptospira
interrogans serovar Grippotyphosa str. Andaman]
gi|410343740|gb|EKO94935.1| base excision DNA repair protein, HhH-GPD family [Leptospira
interrogans str. Brem 329]
gi|410365909|gb|EKP21302.1| base excision DNA repair protein, HhH-GPD family [Leptospira
interrogans serovar Icterohaemorrhagiae str. Verdun LP]
gi|410429755|gb|EKP74130.1| base excision DNA repair protein, HhH-GPD family [Leptospira
santarosai str. HAI1594]
gi|410437825|gb|EKP86924.1| base excision DNA repair protein, HhH-GPD family [Leptospira
interrogans serovar Grippotyphosa str. 2006006986]
gi|410575398|gb|EKQ38416.1| base excision DNA repair protein, HhH-GPD family [Leptospira
interrogans str. 2002000621]
gi|410578464|gb|EKQ46322.1| base excision DNA repair protein, HhH-GPD family [Leptospira
interrogans str. 2002000623]
gi|410755984|gb|EKR17612.1| base excision DNA repair protein, HhH-GPD family [Leptospira
interrogans serovar Pyrogenes str. 2006006960]
gi|410772086|gb|EKR47280.1| base excision DNA repair protein, HhH-GPD family [Leptospira
interrogans serovar Grippotyphosa str. UI 08368]
gi|410790156|gb|EKR83850.1| base excision DNA repair protein, HhH-GPD family [Leptospira
interrogans str. UI 08452]
gi|455667220|gb|EMF32552.1| base excision DNA repair protein, HhH-GPD family [Leptospira
interrogans serovar Pomona str. Fox 32256]
gi|455791771|gb|EMF43568.1| base excision DNA repair protein, HhH-GPD family [Leptospira
interrogans serovar Lora str. TE 1992]
gi|456824144|gb|EMF72581.1| base excision DNA repair protein, HhH-GPD family [Leptospira
interrogans serovar Canicola str. LT1962]
gi|456968956|gb|EMG10053.1| base excision DNA repair protein, HhH-GPD family [Leptospira
interrogans serovar Grippotyphosa str. LT2186]
Length = 228
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 106/186 (56%), Gaps = 1/186 (0%)
Query: 76 LRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDN 135
LR KDP+ LID+ ++ +P+ L KS+L QQL+ K A + R ++L +
Sbjct: 34 LRKKDPITKKLIDSIGLCKLKTIGTPYQVLIKSVLGQQLSVKVALTFERRLISLVGSKKI 93
Query: 136 ILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVK 195
P+ +L + ++R+IGVS K ++ +AE Y ++D + +++D + K+L S+K
Sbjct: 94 PSPEQILKIPNDEMRKIGVSQAKTETIKRIAEAYLKRSITDSKLHKLEDSDVLKLLCSIK 153
Query: 196 GIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSV 255
G+G W+ M +IF+L + D + DL +RK ++ YG+ + +++ + PYR++
Sbjct: 154 GVGPWTAEMVLIFALDRWDHFSINDLILRKSVEKHYGISK-DNKKEIQLFLNTYSPYRTI 212
Query: 256 GSWYMW 261
SWY+W
Sbjct: 213 LSWYLW 218
>gi|418698329|ref|ZP_13259306.1| base excision DNA repair protein, HhH-GPD family [Leptospira
interrogans serovar Bataviae str. L1111]
gi|418732079|ref|ZP_13290155.1| base excision DNA repair protein, HhH-GPD family [Leptospira
interrogans str. UI 12758]
gi|410762472|gb|EKR28633.1| base excision DNA repair protein, HhH-GPD family [Leptospira
interrogans serovar Bataviae str. L1111]
gi|410773479|gb|EKR53506.1| base excision DNA repair protein, HhH-GPD family [Leptospira
interrogans str. UI 12758]
Length = 228
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 106/186 (56%), Gaps = 1/186 (0%)
Query: 76 LRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDN 135
LR KDP+ LID+ ++ +P+ L KS+L QQL+ K A + R ++L +
Sbjct: 34 LRKKDPITKKLIDSIGLCKLKTIGTPYQVLIKSVLGQQLSVKVALTFERRLISLVGSKKI 93
Query: 136 ILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVK 195
P+ +L + ++R+IGVS K ++ +AE Y ++D + +++D + K+L S+K
Sbjct: 94 PSPEQILKIPNDEMRKIGVSQAKTETIKRIAEAYLKRSITDSKLHKLEDSDVLKLLCSIK 153
Query: 196 GIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSV 255
G+G W+ M +IF+L + D + DL +RK ++ YG+ + +++ + PYR++
Sbjct: 154 GVGPWTAEMVLIFALDRWDHFSINDLILRKSVEKHYGISK-DNKKEIQLFLNTYSPYRTI 212
Query: 256 GSWYMW 261
SWY+W
Sbjct: 213 LSWYLW 218
>gi|336371959|gb|EGO00299.1| hypothetical protein SERLA73DRAFT_160226 [Serpula lacrymans var.
lacrymans S7.3]
gi|336384711|gb|EGO25859.1| hypothetical protein SERLADRAFT_415259 [Serpula lacrymans var.
lacrymans S7.9]
Length = 479
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 83/246 (33%), Positives = 123/246 (50%), Gaps = 38/246 (15%)
Query: 16 SASSKITFPPRKIRKLTTITPITKIAEIPVATAISTNSDNSPKIFKPLTFKGEVDIALRH 75
+AS+ P K ++ P T + PV A S + D K P + A RH
Sbjct: 55 AASTPKNTPKAKKARVDEAPPSTPLVLPPVPEA-SKSDDPIEKSLVPAVLSFSFEDAKRH 113
Query: 76 LRDKDPLLATLIDAHRPPTFESSRS--PFLSLAKSILYQQLAYKAAKSIYTRFVALFNGE 133
L + D + R +E PF +L +SIL QQ+++ AA+SI RF+ L+N
Sbjct: 114 LINVDGRFEDIFSKLRCKPYEQLEQVHPFRALVQSILGQQISWLAARSINHRFIRLYNPS 173
Query: 134 DNILPD-----------AVLAVSPQQ--------LREIGVSYRKASY------------- 161
LP+ A SP + L+ G+S RKA Y
Sbjct: 174 ---LPEKATDYNEAKSAASFFPSPSRVAKTDIAVLKSAGLSTRKAEYESNARNPKHACTE 230
Query: 162 LRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDL 221
++DLA +++DG LS E ++E DD + +MLT V+GIG W+V MF +FSL +P++LPVGDL
Sbjct: 231 VQDLAARFSDGRLSTEKLLEADDEELTQMLTEVRGIGKWTVDMFAMFSLRRPNILPVGDL 290
Query: 222 GVRKGL 227
GV++G+
Sbjct: 291 GVQRGV 296
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 35/59 (59%), Gaps = 9/59 (15%)
Query: 213 PDVLPVGDLGVRKGLQVLYGLKELPGAL----KMEEVCEKWKPYRSVGSWYMWRLMEAK 267
P+ L V +L R G G K++ GAL +ME + E WKPYRS+G +YMW L E K
Sbjct: 426 PEGLTVAELKTRLG-----GKKKIKGALLTPNEMEALTETWKPYRSLGVYYMWSLAEDK 479
>gi|381206856|ref|ZP_09913927.1| HhH-GPD [SAR324 cluster bacterium JCVI-SC AAA005]
Length = 207
Score = 114 bits (285), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 105/198 (53%), Gaps = 2/198 (1%)
Query: 72 ALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFN 131
L++L + D +L +I RP + F SL + I QQL+ AA +I+ R + +
Sbjct: 9 GLKYLSESDEILRRVIGNLRPKKPDQREPNFESLIRIIAGQQLSSAAASTIFQRLKSRYT 68
Query: 132 GEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKML 191
G+ I P+ ++ ++ E G+S K Y+ +A+++ D E ++ M+ + + L
Sbjct: 69 GQ-TITPEMIITTFSAEILECGLSKPKVRYILQIAQEFKDQPNLIEDLIRMNSEQILQTL 127
Query: 192 TSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKP 251
KGIG WS +F +F LH PD+ GD+ ++K +++LY + L + EE+ E W+P
Sbjct: 128 QKFKGIGIWSASIFALFYLHHPDIFAWGDVSIKKAIKLLYEEQNL-NEKRTEEIIEPWRP 186
Query: 252 YRSVGSWYMWRLMEAKGV 269
YRS +WR ++ +
Sbjct: 187 YRSTACLVLWRWIDEGAI 204
>gi|418705109|ref|ZP_13265974.1| base excision DNA repair protein, HhH-GPD family [Leptospira
interrogans serovar Hebdomadis str. R499]
gi|410764960|gb|EKR35662.1| base excision DNA repair protein, HhH-GPD family [Leptospira
interrogans serovar Hebdomadis str. R499]
Length = 228
Score = 114 bits (285), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 106/186 (56%), Gaps = 1/186 (0%)
Query: 76 LRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDN 135
LR KDP+ LID+ ++ +P+ L KS+L QQL+ K A + R ++L +
Sbjct: 34 LRKKDPITKKLIDSIGLCKLKTIGTPYQVLIKSVLGQQLSVKVALTFERRLISLVGSKKI 93
Query: 136 ILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVK 195
P+ +L + ++R+IGVS K ++ +AE Y ++D + +++D + K+L S+K
Sbjct: 94 PSPEQILKIPNDEMRKIGVSQAKTETIKRIAEAYLKRSITDSKLHKLEDSDVLKLLCSIK 153
Query: 196 GIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSV 255
G+G W+ M +IF+L + D + DL +RK ++ YG+ + +++ + PYR++
Sbjct: 154 GVGPWTAEMVLIFALDRWDHFSINDLILRKSVEKHYGISK-DNKKEIQLFLNTYSPYRTI 212
Query: 256 GSWYMW 261
SWY+W
Sbjct: 213 LSWYLW 218
>gi|56418963|ref|YP_146281.1| DNA-3-methyladenine glycosidase II [Geobacillus kaustophilus
HTA426]
gi|56378805|dbj|BAD74713.1| DNA-3-methyladenine glycosidase II [Geobacillus kaustophilus
HTA426]
Length = 294
Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 99/169 (58%), Gaps = 5/169 (2%)
Query: 102 FLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNIL-----PDAVLAVSPQQLREIGVSY 156
+ L K +++QQL K + RFV F E + + P+ + A S + LR + +S
Sbjct: 126 YFCLVKCLIHQQLHLKVGYRLTERFVKTFGEERDGVWFYPRPEEIAARSYEDLRALQLSG 185
Query: 157 RKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVL 216
RKA Y+ +++ +G L + I +M+D + + LT+V+GIG W+V F++F L +P+V
Sbjct: 186 RKAEYIVNVSRLIAEGKLRLDEIEQMEDGEVMERLTAVRGIGPWTVQNFLLFGLGRPNVF 245
Query: 217 PVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSWYMWRLME 265
P D+G+++ ++ +GL + P +M + E+WKPY S + Y+WR +E
Sbjct: 246 PPADIGLQRAVEKWFGLPKRPTTKEMAALGERWKPYASYAALYLWRSIE 294
>gi|359398457|ref|ZP_09191476.1| DNA-3-methyladenine glycosylase II [Novosphingobium
pentaromativorans US6-1]
gi|357600148|gb|EHJ61848.1| DNA-3-methyladenine glycosylase II [Novosphingobium
pentaromativorans US6-1]
Length = 205
Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 62/193 (32%), Positives = 102/193 (52%), Gaps = 3/193 (1%)
Query: 69 VDIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVA 128
+ + L L ++P +A +D P + + +L ++I+ QQ++ AA S+++R A
Sbjct: 8 IKLGLDALAAREPGIARALDLAGYPEPRIRQRGYATLLRTIVGQQVSVAAAASVWSRLEA 67
Query: 129 LFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMF 188
L + + PDA+LA LR G+S +K Y R L E G L E++ E DD
Sbjct: 68 LLG--EGLSPDALLAADFDALRGCGLSRQKQGYARSLCELVVAGALDLENLPE-DDEAAI 124
Query: 189 KMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEK 248
L +KGIG WS ++++F+ +PD+ P GDL V+ GL + GL P + E+ E
Sbjct: 125 ADLVRIKGIGRWSAEIYLLFAEGRPDIWPAGDLAVQAGLHRILGLDARPSEKETRELAEG 184
Query: 249 WKPYRSVGSWYMW 261
W+P+R + + W
Sbjct: 185 WRPHRGSAAIFTW 197
>gi|418530404|ref|ZP_13096327.1| HhH-GPD [Comamonas testosteroni ATCC 11996]
gi|371452123|gb|EHN65152.1| HhH-GPD [Comamonas testosteroni ATCC 11996]
Length = 274
Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 67/203 (33%), Positives = 112/203 (55%), Gaps = 11/203 (5%)
Query: 72 ALRHLRDKDPLLATLI-----DAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRF 126
A R L +D +L LI A +P E + F +LA+SI+ QQ++ K+AK+++ +F
Sbjct: 77 ACRQLMRRDRVLKRLIPQLGSQALQPCGQEQA---FATLARSIIGQQISAKSAKTLWNKF 133
Query: 127 VALFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVT 186
L + P+ VL + +R G+S RK YL DLA +T+ L + +M D
Sbjct: 134 ARLPAA---MQPEQVLRLKVDDMRGAGLSARKVDYLVDLALHFTEHRLHMDEWAQMSDEV 190
Query: 187 MFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVC 246
+ L S++G+ W+ F+I+ L +P+VLP+ D G+ +G+ + + + EV
Sbjct: 191 IIAELMSIRGLSRWTAENFLIYCLGRPNVLPLDDAGLIQGISLNHFSGDPVSRSDAREVA 250
Query: 247 EKWKPYRSVGSWYMWRLMEAKGV 269
E WKP+ +V +WY+WR +EA+ V
Sbjct: 251 EAWKPWCTVATWYIWRSLEAQPV 273
>gi|336268991|ref|XP_003349257.1| hypothetical protein SMAC_05541 [Sordaria macrospora k-hell]
gi|380089830|emb|CCC12363.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 415
Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 80/257 (31%), Positives = 115/257 (44%), Gaps = 54/257 (21%)
Query: 63 LTFKGEVDIALRHLRDKDPLLATLIDAH-----RPPTFESSRSPFLSLAKSILYQQLAYK 117
+T + ++ A HL DP + LID H P PF SL SI+ QQ++
Sbjct: 152 ITTENILEKACAHLIAVDPRMKPLIDKHPCRIFSPEGLAEQIDPFESLVSSIISQQVSGA 211
Query: 118 AAKSIYTRFVALFN------------GEDNI-------------------LPDAVLAVSP 146
AAKSI +FVALF+ G+D P VL
Sbjct: 212 AAKSIKGKFVALFDDPSLDQDQDDEDGKDTPPGHPAEDQPSSKRRKRRFPTPSLVLQKDL 271
Query: 147 QQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIGAWSVHMFM 206
LR G+S RKA Y+ LA K+ G LS + + L +V+G+G W+V MF
Sbjct: 272 PTLRTAGLSQRKAEYIHGLASKFASGELSASLLASAPYDELVSKLVAVRGLGLWTVEMFA 331
Query: 207 IFSLHKPDVLPVGDLGVRKGLQVLYG------------------LKELPGALKMEEVCEK 248
F+L + DV +GDLGV++G+ G + +M+E+ E+
Sbjct: 332 CFALKRMDVFSLGDLGVQRGMAAFVGRDVKKLKNGNGKGNGKDKKWKYMSEGEMKEISER 391
Query: 249 WKPYRSVGSWYMWRLME 265
++PYRS+ WYMWR+ E
Sbjct: 392 FRPYRSLFMWYMWRVEE 408
>gi|89097301|ref|ZP_01170191.1| YfjP [Bacillus sp. NRRL B-14911]
gi|89088124|gb|EAR67235.1| YfjP [Bacillus sp. NRRL B-14911]
Length = 281
Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 109/206 (52%), Gaps = 5/206 (2%)
Query: 65 FKGEVDIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYT 124
F+ + + H ++ L + D H P+ L K I++QQL A ++
Sbjct: 76 FQWHIPLEDIHTHFQNTELKAIFDEHYGTPVVLDFDPYGCLLKCIIHQQLNLSFAFTLTK 135
Query: 125 RFVALFNGEDNIL-----PDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESI 179
RFV F + + + P+ V A++ +QLRE+ S RKA Y L+++ T+G L+ E +
Sbjct: 136 RFVETFGFQKDGVWFYPRPETVAALTVEQLRELQFSGRKAEYAIGLSKEITEGRLNLEEL 195
Query: 180 VEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGA 239
+ D + K L ++GIG W+V F++F L +P++ P D+G++ L+ LY L+ P
Sbjct: 196 AKEPDEMVMKKLIKIRGIGPWTVQNFLMFGLGRPNLFPKADIGLQNALKKLYKLEAKPTH 255
Query: 240 LKMEEVCEKWKPYRSVGSWYMWRLME 265
+M+E W PY + S Y+WR +E
Sbjct: 256 EQMDEYMLGWDPYLTYASLYLWRSIE 281
>gi|389872127|ref|YP_006379546.1| base excision DNA repair protein [Advenella kashmirensis WT001]
gi|388537376|gb|AFK62564.1| base excision DNA repair protein [Advenella kashmirensis WT001]
Length = 200
Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 73/204 (35%), Positives = 105/204 (51%), Gaps = 9/204 (4%)
Query: 62 PLTFKGEVDIALRHLRDKDPLLATLIDAHRPPTFESSRSP--FLSLAKSILYQQLAYKAA 119
P+ GE ++ RDK LA I+ R E S P F +L + I+ QQ++ AA
Sbjct: 2 PIFQYGETEVEWLSKRDKR--LAQAIE--RIGLIERSTMPDLFTALIQCIIDQQISAAAA 57
Query: 120 KSIYTRFVALFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESI 179
+++ R + + G ++ +A+LA L+ G S RK Y+ +AE G L +I
Sbjct: 58 RTVNARILQVCGG--HMSAEALLAAGADNLQRCGTSMRKVQYMLGVAEAVQAGKLDLSAI 115
Query: 180 VEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGA 239
MDD + + LT +KGIG W+ M MIFSL +PDVL GDL +++G+ LY KELP
Sbjct: 116 PAMDDAQVIQTLTGLKGIGIWTAEMLMIFSLGRPDVLSWGDLAIQRGIMRLYNHKELPRE 175
Query: 240 LKMEEVCEKWKPYRSVGSWYMWRL 263
PY S S Y+W L
Sbjct: 176 RFERYRRRY-SPYGSTASLYLWAL 198
>gi|448236703|ref|YP_007400761.1| putative DNA glycosylase [Geobacillus sp. GHH01]
gi|445205545|gb|AGE21010.1| putative DNA glycosylase [Geobacillus sp. GHH01]
Length = 288
Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 98/169 (57%), Gaps = 5/169 (2%)
Query: 102 FLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNIL-----PDAVLAVSPQQLREIGVSY 156
+ L K +++QQL K + RFV F E + + P+ V A S LR + +S
Sbjct: 120 YFCLMKCLIHQQLHLKVGYRLTERFVKAFGEERDGVWFYPRPEEVAARSYDDLRALQLSG 179
Query: 157 RKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVL 216
RKA Y+ D++ +G L + + +M+D + + LT+V+GIG W+V F++F L +P+V
Sbjct: 180 RKAEYIVDVSRLIAEGKLRLDELEQMEDGEVMERLTAVRGIGPWTVQNFLLFGLGRPNVF 239
Query: 217 PVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSWYMWRLME 265
P D+G+++ ++ +GL + P +M + E+WKPY S + Y+WR +E
Sbjct: 240 PPADIGLQRAVEKWFGLPKRPTVKEMAALSERWKPYASYAALYLWRSIE 288
>gi|138894074|ref|YP_001124527.1| DNA-3-methyladenine glycosylase II [Geobacillus thermodenitrificans
NG80-2]
gi|196250257|ref|ZP_03148950.1| DNA-3-methyladenine glycosylase II [Geobacillus sp. G11MC16]
gi|134265587|gb|ABO65782.1| DNA-3-methyladenine glycosylase II [Geobacillus thermodenitrificans
NG80-2]
gi|196210146|gb|EDY04912.1| DNA-3-methyladenine glycosylase II [Geobacillus sp. G11MC16]
Length = 288
Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 98/169 (57%), Gaps = 5/169 (2%)
Query: 102 FLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNIL-----PDAVLAVSPQQLREIGVSY 156
+ L K ++QQL K + RFV F E + + P+ + A S LR + +S
Sbjct: 120 YFCLMKCFIHQQLHLKVGYRLTERFVKTFGEERDGVWFYPRPEDIAARSYDDLRALQLSR 179
Query: 157 RKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVL 216
RKA Y+ D++ DG L + + +M+D + + LT+++GIG W+V F++F L +P+V
Sbjct: 180 RKAEYIVDVSRLIADGTLRLDDLEQMEDGEVMERLTAIRGIGPWTVQNFLLFGLGRPNVF 239
Query: 217 PVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSWYMWRLME 265
P D+G+++ ++ L+ L + P A ++ + E+WKPY S + Y+WR +E
Sbjct: 240 PPADIGLQRAVERLFQLPKRPTASELALLGERWKPYTSYAALYLWRSIE 288
>gi|429218990|ref|YP_007180634.1| 3-methyladenine DNA glycosylase [Deinococcus peraridilitoris DSM
19664]
gi|429129853|gb|AFZ66868.1| 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase
[Deinococcus peraridilitoris DSM 19664]
Length = 243
Score = 114 bits (284), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 123/233 (52%), Gaps = 7/233 (3%)
Query: 31 LTTITPITKIAEIPVATAISTNSDNSP--KIFKPLTFKGEVDIALRHLRDKDPLLATLID 88
L T +T+ AE +A P + + LT + + L L +DP+L L+
Sbjct: 3 LPTAERVTESAEGQAGSAPGAVCSCGPCRSVHEMLTPARQAE-GLAELAGRDPVLRALLA 61
Query: 89 AHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNILPDAVLAVSPQQ 148
P S F +L IL QQ++ +A++ +TR A + P+ +LA S
Sbjct: 62 QFGAPPLWSRPPGFAALVLIILEQQVSLASARAAFTRLQARVG---EVTPEVILA-SADN 117
Query: 149 LREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIF 208
LR G++ +K++YL LAE +G + + + DD + + L+ +KG+G W+V ++++
Sbjct: 118 LRGAGLTRQKSAYLLALAEAVVNGRVDLDGLERQDDAGVREALSGIKGVGPWTVDVYLLL 177
Query: 209 SLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSWYMW 261
+L +PD+LPVGDL + ++ +YGL E P ++ + + W+P+RSV + +W
Sbjct: 178 ALLRPDILPVGDLALVSSVRRVYGLAERPTRAQLLVMGQSWRPWRSVATRLLW 230
>gi|297531278|ref|YP_003672553.1| HhH-GPD family protein [Geobacillus sp. C56-T3]
gi|297254530|gb|ADI27976.1| HhH-GPD family protein [Geobacillus sp. C56-T3]
Length = 288
Score = 114 bits (284), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 98/169 (57%), Gaps = 5/169 (2%)
Query: 102 FLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNIL-----PDAVLAVSPQQLREIGVSY 156
+ L K +++QQL K + RFV F E + + P+ V A S LR + +S
Sbjct: 120 YFCLMKCLIHQQLHLKVGYRLTERFVKAFGEERDGVWFYPRPEEVAARSYDDLRALQLSG 179
Query: 157 RKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVL 216
RKA Y+ D++ +G L + + +M+D + + LT+V+GIG W+V F++F L +P+V
Sbjct: 180 RKAEYIVDVSRLIAEGKLRLDELEQMEDGEVMEKLTAVRGIGPWTVQNFLLFGLGRPNVF 239
Query: 217 PVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSWYMWRLME 265
P D+G+++ ++ +GL + P +M + E+WKPY S + Y+WR +E
Sbjct: 240 PPADIGLQRAVEKWFGLPKRPTTKEMAALSERWKPYASYAALYLWRSIE 288
>gi|399018069|ref|ZP_10720255.1| HhH-GPD superfamily base excision DNA repair protein
[Herbaspirillum sp. CF444]
gi|398102034|gb|EJL92226.1| HhH-GPD superfamily base excision DNA repair protein
[Herbaspirillum sp. CF444]
Length = 214
Score = 114 bits (284), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 100/192 (52%), Gaps = 3/192 (1%)
Query: 75 HLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGED 134
L +D ++ LI F +LA+SI+ QQ++ K A+ ++ RF+
Sbjct: 23 ELMKRDRIMRKLIPQFGDLQLTGRGDAFTTLARSIIGQQISTKTAQVVWQRFLEEC---P 79
Query: 135 NILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSV 194
P VL P+ L G+S RKA Y+ DLA + + + EM+D + + +
Sbjct: 80 KCTPLQVLKAGPENLVACGLSKRKAEYILDLANHFKAKTVHPDKWAEMEDEDVIAEMLQI 139
Query: 195 KGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRS 254
+G+G W+ MF+IF+L +P+VLP+ D G+ KG+ Y E EV W+P+R+
Sbjct: 140 RGLGRWTAEMFLIFNLLRPNVLPLDDPGLLKGISNSYFSGEPVSRSDAREVAANWEPWRT 199
Query: 255 VGSWYMWRLMEA 266
V +WY+WR +++
Sbjct: 200 VATWYLWRSLDS 211
>gi|448410117|ref|ZP_21575066.1| DNA N-glycosylase / DNA lyase [Halosimplex carlsbadense 2-9-1]
gi|445672397|gb|ELZ24973.1| DNA N-glycosylase / DNA lyase [Halosimplex carlsbadense 2-9-1]
Length = 192
Score = 114 bits (284), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 63/186 (33%), Positives = 101/186 (54%), Gaps = 6/186 (3%)
Query: 80 DPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNILPD 139
D +L ++D H + E + F L S++ QQ++ AA +I R LF + + P+
Sbjct: 12 DEVLGPVVDEHGAVSIEPADDCFERLVVSLIRQQVSMDAAAAIRER---LFEAVE-VTPE 67
Query: 140 AVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIGA 199
A++ L E G+S KA Y + A + ++ + D + LT + GIG
Sbjct: 68 AIVEADYATLHEAGLSEAKADYAKSAASAFLTREWDRDTFADTSDDAVRAELTDIHGIGP 127
Query: 200 WSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSWY 259
W+ MF++F+L + DV PVGDLG+RKG+ L+ E+ A +M + E+W+PYRS S Y
Sbjct: 128 WTADMFLMFALGREDVFPVGDLGIRKGMDRLFD-AEMTRA-EMTDAAERWRPYRSYASCY 185
Query: 260 MWRLME 265
+WR +E
Sbjct: 186 LWRAVE 191
>gi|365170643|ref|ZP_09361096.1| hypothetical protein HMPREF1006_01972 [Synergistes sp. 3_1_syn1]
gi|363618010|gb|EHL69372.1| hypothetical protein HMPREF1006_01972 [Synergistes sp. 3_1_syn1]
Length = 221
Score = 114 bits (284), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 102/176 (57%), Gaps = 6/176 (3%)
Query: 102 FLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNILPDAVLAVSPQQLREIGVSYRKASY 161
F +L I QQ++ +A ++++ R A G + P+ V + ++++ G+S+RKA Y
Sbjct: 40 FSALVHHIAGQQISTQAQRTVWGRISA---GIKEVTPENVRSAGVEKMQSFGISFRKAEY 96
Query: 162 LRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDL 221
+ +LA+K G ++ EMDD + K L +++GIG W+ M +IFS+ + DVL GD
Sbjct: 97 ITELAQKTASGEFDPAALWEMDDEDVIKELCALRGIGRWTAEMLLIFSMQRRDVLSFGDF 156
Query: 222 GVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSWYMWRLMEAKGVLPNVAKAA 277
G+R+GL++LY KE+ L E +++ P S+ S Y+W + A G +P + A
Sbjct: 157 GIRRGLRMLYRHKEITPEL-FERYRKRYSPCGSLASLYLWEI--AGGAIPGMTDRA 209
>gi|112491140|pdb|2H56|A Chain A, Crystal Structure Of Dna-3-methyladenine Glycosidase
(10174367) From Bacillus Halodurans At 2.55 A Resolution
gi|112491141|pdb|2H56|B Chain B, Crystal Structure Of Dna-3-methyladenine Glycosidase
(10174367) From Bacillus Halodurans At 2.55 A Resolution
gi|112491142|pdb|2H56|C Chain C, Crystal Structure Of Dna-3-methyladenine Glycosidase
(10174367) From Bacillus Halodurans At 2.55 A Resolution
Length = 233
Score = 114 bits (284), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 63/163 (38%), Positives = 91/163 (55%), Gaps = 1/163 (0%)
Query: 100 SPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNILPDAVLAVSPQQLREIGVSYRKA 159
+PF SL SI+ QQL+ KAA +IY R L G P+ + VS + LR+ GVS RK
Sbjct: 50 NPFQSLVSSIVEQQLSIKAASAIYGRVEQLVGGALE-KPEQLYRVSDEALRQAGVSKRKI 108
Query: 160 SYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVG 219
Y+R + E G L + + T+ + LT++KGIG W+ F FSL + DVL VG
Sbjct: 109 EYIRHVCEHVESGRLDFTELEGAEATTVIEKLTAIKGIGQWTAEXFXXFSLGRLDVLSVG 168
Query: 220 DLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSWYMWR 262
D+G+++G + LYG E G + + W PY +V Y+W+
Sbjct: 169 DVGLQRGAKWLYGNGEGDGKKLLIYHGKAWAPYETVACLYLWK 211
>gi|421129358|ref|ZP_15589558.1| base excision DNA repair protein, HhH-GPD family [Leptospira
kirschneri str. 2008720114]
gi|410358733|gb|EKP05842.1| base excision DNA repair protein, HhH-GPD family [Leptospira
kirschneri str. 2008720114]
Length = 228
Score = 114 bits (284), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 107/186 (57%), Gaps = 1/186 (0%)
Query: 76 LRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDN 135
LR KDP+ L+D+ ++ +P+ L KS+L QQL+ K A + R ++L +
Sbjct: 34 LRKKDPITKKLVDSIGLCKLKTIGTPYQVLIKSVLGQQLSVKVALTFERRLISLAGSKKI 93
Query: 136 ILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVK 195
P+ +L + ++R+IGVS K ++ +AE Y ++D + +++D + K+L S+K
Sbjct: 94 PSPEQILKIPNDEMRKIGVSQAKMETIKRIAEAYLKRSITDSKLRKLEDSDVLKLLCSIK 153
Query: 196 GIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSV 255
G+G W+ M +IF+L + D + DL +RK ++ YG+ + +++ + + PYR++
Sbjct: 154 GVGPWTAEMVLIFALDRWDHFSINDLILRKSVEKHYGISK-DNKKEIQLLLNTYSPYRTI 212
Query: 256 GSWYMW 261
SWY+W
Sbjct: 213 ISWYLW 218
>gi|417768102|ref|ZP_12416037.1| base excision DNA repair protein, HhH-GPD family [Leptospira
interrogans serovar Bulgarica str. Mallika]
gi|400349547|gb|EJP01840.1| base excision DNA repair protein, HhH-GPD family [Leptospira
interrogans serovar Bulgarica str. Mallika]
Length = 228
Score = 114 bits (284), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 106/186 (56%), Gaps = 1/186 (0%)
Query: 76 LRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDN 135
LR KDP+ LID+ ++ +P+ L KS+L QQL+ K A + R ++L +
Sbjct: 34 LRKKDPITKKLIDSIGLCKLKTIGTPYQVLIKSVLGQQLSVKVALTFERRLISLVGSKKI 93
Query: 136 ILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVK 195
P+ +L + ++R+IGVS K ++ +AE Y ++D + +++D + K+L S+K
Sbjct: 94 PSPEQILKIPNDEMRKIGVSQAKTETIKRIAEAYLKRSITDSKLHKLEDSDVLKLLCSIK 153
Query: 196 GIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSV 255
G+G W+ M +IF+L + D + DL +RK ++ YG+ + +++ + PYR++
Sbjct: 154 GMGPWTAEMVLIFALDRWDHFSINDLILRKSVEKHYGISK-DNKKEIQLFLNTYSPYRTI 212
Query: 256 GSWYMW 261
SWY+W
Sbjct: 213 LSWYLW 218
>gi|390456271|ref|ZP_10241799.1| HhH-GPD family protein [Paenibacillus peoriae KCTC 3763]
Length = 252
Score = 114 bits (284), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 63/169 (37%), Positives = 100/169 (59%), Gaps = 4/169 (2%)
Query: 95 FESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNILPDAVLAVSPQQLREIGV 154
S + F +LA SI+ QQL+ KAA +I R L NG I P++++++ LR G+
Sbjct: 58 LNSDKDYFTALATSIIGQQLSSKAATTIRKRVSLLCNGV--ITPESIISIPYDDLRAAGL 115
Query: 155 SYRKASYLRDLAEK-YTDGILSDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKP 213
S K Y++DLAEK YT I +E I +D + LT VKGIG W+ MF+IF+L++
Sbjct: 116 SKAKTEYIKDLAEKVYTKKIDFNE-ICLKEDNEIISSLTEVKGIGKWTAEMFLIFALNRV 174
Query: 214 DVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSWYMWR 262
+V+ D G+++ + LY E+P +++V W+P++S+ S Y+W
Sbjct: 175 NVMSYADAGLQRAARWLYNSPEIPKYNYLQKVESSWEPFKSIASLYLWE 223
>gi|291523228|emb|CBK81521.1| DNA-3-methyladenine glycosylase II [Coprococcus catus GD/7]
Length = 214
Score = 113 bits (283), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 113/207 (54%), Gaps = 8/207 (3%)
Query: 67 GEVDIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRF 126
GE +I +LR+KD L+ +ID E F ++ I+ QQ++ KA +I+ R
Sbjct: 6 GENEIT--YLRNKDKKLSEVIDQIGMIEREVDTDLFSAVVHHIIGQQISTKAQATIWQRM 63
Query: 127 VALFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVT 186
+ + +L+ +L+ +G+++RKA Y+ D A K +G+ E++ +M D
Sbjct: 64 KETLGAVNAV---TILSADISKLQSLGMTFRKAEYITDFARKVHEGVFDLEAVAQMSDEA 120
Query: 187 MFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVC 246
K L S+KGIG W+ M ++F L +PD+ DL +++GL+++Y +++ L E+
Sbjct: 121 AIKELASLKGIGVWTAEMILLFCLQRPDIFSYDDLAIQRGLRMVYHHRKIDRKL-FEKYR 179
Query: 247 EKWKPYRSVGSWYMWRLMEAKGVLPNV 273
++ PY SV S Y+W + A G +P +
Sbjct: 180 RRFSPYCSVASLYLWAV--AGGAIPEM 204
>gi|261418754|ref|YP_003252436.1| DNA-3-methyladenine glycosylase II [Geobacillus sp. Y412MC61]
gi|319765570|ref|YP_004131071.1| HhH-GPD family protein [Geobacillus sp. Y412MC52]
gi|261375211|gb|ACX77954.1| DNA-3-methyladenine glycosylase II [Geobacillus sp. Y412MC61]
gi|317110436|gb|ADU92928.1| HhH-GPD family protein [Geobacillus sp. Y412MC52]
Length = 288
Score = 113 bits (283), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 98/169 (57%), Gaps = 5/169 (2%)
Query: 102 FLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNIL-----PDAVLAVSPQQLREIGVSY 156
+ L K +++QQL K + RFV F E + + P+ V A S LR + +S
Sbjct: 120 YFCLMKCLIHQQLHLKVGYRLTERFVKAFGEERDGVWFYPRPEEVAARSYDDLRALQLSG 179
Query: 157 RKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVL 216
RKA Y+ D++ +G L + + +M+D + + LT+V+GIG W+V F++F L +P+V
Sbjct: 180 RKAEYIVDVSRLIAEGKLRLDELKQMEDGEVMEKLTAVRGIGPWTVQNFLLFGLGRPNVF 239
Query: 217 PVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSWYMWRLME 265
P D+G+++ ++ +GL + P +M + E+WKPY S + Y+WR +E
Sbjct: 240 PPADIGLQRAVEKWFGLPKRPTVKEMAALSERWKPYASYAALYLWRSIE 288
>gi|58039425|ref|YP_191389.1| DNA-3-methyladenine glycosylase [Gluconobacter oxydans 621H]
gi|58001839|gb|AAW60733.1| DNA-3-methyladenine glycosylase [Gluconobacter oxydans 621H]
Length = 219
Score = 113 bits (283), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 113/202 (55%), Gaps = 10/202 (4%)
Query: 80 DPLLATLIDAHRPPTF--ESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNI- 136
DP LA +I P T ++ + P+ +L ++I QQL AA+ I+ R L ++++
Sbjct: 15 DPDLAAVIARIGPCTLRGDNGQEPYDALLRAIAGQQLHGAAARKIFGRLC-LLGAQESVD 73
Query: 137 ----LPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVE-MDDVTMFKML 191
P +L++S ++LR G+S K ++ LA+ DG++ + M D + L
Sbjct: 74 GPPPAPGRILSLSEERLRACGLSGNKILAMKGLAQARLDGLVPSRAEASVMTDEELIARL 133
Query: 192 TSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKP 251
+++GIG W+V M ++F+L++PDV+PV D GVR+G + + + P ++E E++ P
Sbjct: 134 VTLRGIGRWTVEMLLMFTLNRPDVMPVDDFGVREGWRRIRKMDLPPKPKALKEETERFAP 193
Query: 252 YRSVGSWYMWRLM-EAKGVLPN 272
+RS +WY WR+ E K PN
Sbjct: 194 HRSTLAWYCWRVAEEGKKTAPN 215
>gi|427403813|ref|ZP_18894695.1| hypothetical protein HMPREF9710_04291 [Massilia timonae CCUG 45783]
gi|425717482|gb|EKU80440.1| hypothetical protein HMPREF9710_04291 [Massilia timonae CCUG 45783]
Length = 237
Score = 113 bits (283), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 63/194 (32%), Positives = 102/194 (52%), Gaps = 3/194 (1%)
Query: 72 ALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFN 131
A R L +D ++ LI PF++LA+SI+ QQ+ KAA + + +A+
Sbjct: 37 AKRELMQRDRIMNKLIPQFGDLHLRGQPDPFITLARSIVGQQVTPKAADLAWGKLLAVC- 95
Query: 132 GEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKML 191
+ P VL + QL G+S RK Y+ DLA+ + + + EMDD + L
Sbjct: 96 --PKLAPSQVLKLGAAQLSGCGLSKRKTEYILDLADHFKAKRVHADLWSEMDDEAVIAEL 153
Query: 192 TSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKP 251
++GI W+ MF+IF+L +P+VLP+ D G+ +G+ Y E EV W+P
Sbjct: 154 VQIRGITRWTAEMFLIFNLLRPNVLPLDDPGLIQGISQNYFSGEPVSRSDAREVSANWEP 213
Query: 252 YRSVGSWYMWRLME 265
+R+V +WY+WR ++
Sbjct: 214 WRTVATWYLWRSLD 227
>gi|398832798|ref|ZP_10590949.1| HhH-GPD superfamily base excision DNA repair protein
[Herbaspirillum sp. YR522]
gi|398222692|gb|EJN09060.1| HhH-GPD superfamily base excision DNA repair protein
[Herbaspirillum sp. YR522]
Length = 219
Score = 113 bits (283), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 56/166 (33%), Positives = 94/166 (56%), Gaps = 3/166 (1%)
Query: 102 FLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNILPDAVLAVSPQQLREIGVSYRKASY 161
F +LA+S++ QQ++ KAA +++ RF+ P V+ V + L + G+S RKA Y
Sbjct: 53 FTTLARSVIGQQISTKAANAVWQRFL---EACPRCQPGQVIRVGLEGLGDCGLSKRKAEY 109
Query: 162 LRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDL 221
+ DLA + + + EM D + + ++GIG W+ MF+IF+L +P+VLP+ D
Sbjct: 110 ILDLANHFKAKTVHPDKWAEMADEDVIAEMIQIRGIGRWTAEMFLIFNLLRPNVLPLDDP 169
Query: 222 GVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSWYMWRLMEAK 267
G+ KG+ Y E EV W+P+R+V +WY+WR ++ +
Sbjct: 170 GLLKGISDSYFSGEPVSRSDAREVAANWEPWRTVATWYLWRSLDPR 215
>gi|327351602|gb|EGE80459.1| DNA-3-methyladenine glycosylase [Ajellomyces dermatitidis ATCC
18188]
Length = 439
Score = 113 bits (283), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 81/261 (31%), Positives = 115/261 (44%), Gaps = 69/261 (26%)
Query: 72 ALRHLRDKDPLLATLIDAHRPPTFESSR-----SPFLSLAKSILYQQLAYKAAKSIYTRF 126
A+ HL P L +I+ H P F + PF SL I+ QQ++ AAKSI +F
Sbjct: 170 AVAHLIKVAPQLRPVIEKHPCPLFSPAGLAEEIDPFNSLVSGIIGQQVSGAAAKSIKKKF 229
Query: 127 VALF------NGEDNILPDAVLAV------------------------------------ 144
+ALF G+ N + +A +
Sbjct: 230 MALFRSDGGGGGDCNSINNATATIATTVINDGGAATKNNNNMDAGEKIETAEMRYDRDDD 289
Query: 145 --SPQQ--------LREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSV 194
+P Q LR G+S RKA Y++ LAEK+ G LS +++ D + + L +V
Sbjct: 290 FPTPAQVAKCDIATLRTAGLSQRKAEYIQGLAEKFASGELSARMLLQASDEEVLEKLIAV 349
Query: 195 KGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYG-----LKELPGA-------LKM 242
+G+G WSV MF F L + DV GDLGV++G+ G LK G +M
Sbjct: 350 RGLGKWSVEMFSCFGLKRMDVFSTGDLGVQRGMAAFVGRDVSKLKAKGGGKFKYMSEKEM 409
Query: 243 EEVCEKWKPYRSVGSWYMWRL 263
EV + PYRS+ WYMWR+
Sbjct: 410 VEVAAPFSPYRSLFMWYMWRI 430
>gi|239606632|gb|EEQ83619.1| DNA-3-methyladenine glycosylase [Ajellomyces dermatitidis ER-3]
Length = 438
Score = 113 bits (283), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 81/261 (31%), Positives = 115/261 (44%), Gaps = 69/261 (26%)
Query: 72 ALRHLRDKDPLLATLIDAHRPPTFESSR-----SPFLSLAKSILYQQLAYKAAKSIYTRF 126
A+ HL P L +I+ H P F + PF SL I+ QQ++ AAKSI +F
Sbjct: 169 AVAHLIKVAPQLRPVIEKHPCPLFSPAGLAEEIDPFNSLVSGIIGQQVSGAAAKSIKKKF 228
Query: 127 VALF------NGEDNILPDAVLAV------------------------------------ 144
+ALF G+ N + +A +
Sbjct: 229 MALFRSDGGGGGDCNSINNATATIATTVINDGGAATKNNNNMDAGEKIETAEMRYDRDDD 288
Query: 145 --SPQQ--------LREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSV 194
+P Q LR G+S RKA Y++ LAEK+ G LS +++ D + + L +V
Sbjct: 289 FPTPAQVAKCDIATLRTAGLSQRKAEYIQGLAEKFASGELSARMLLQASDEEVLEKLIAV 348
Query: 195 KGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYG-----LKELPGA-------LKM 242
+G+G WSV MF F L + DV GDLGV++G+ G LK G +M
Sbjct: 349 RGLGKWSVEMFSCFGLKRMDVFSTGDLGVQRGMAAFVGRDVSKLKAKGGGKFKYMSEKEM 408
Query: 243 EEVCEKWKPYRSVGSWYMWRL 263
EV + PYRS+ WYMWR+
Sbjct: 409 VEVAAPFSPYRSLFMWYMWRI 429
>gi|421111873|ref|ZP_15572342.1| base excision DNA repair protein, HhH-GPD family [Leptospira
santarosai str. JET]
gi|410802794|gb|EKS08943.1| base excision DNA repair protein, HhH-GPD family [Leptospira
santarosai str. JET]
Length = 226
Score = 113 bits (283), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 108/196 (55%), Gaps = 5/196 (2%)
Query: 70 DIALRH----LRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTR 125
DI LR LR KDP+ LID+ P + +P+ L KS+L QQL+ K A + R
Sbjct: 22 DIRLRKASDWLRKKDPITQKLIDSVGPCKLRTIGTPYQVLIKSVLGQQLSVKVALTFERR 81
Query: 126 FVALFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDV 185
++L P+ +L + +L++IGVS K ++ +AE Y+ ++D + +++D
Sbjct: 82 LISLAGSRKIPPPNRILTIPNGELKKIGVSQAKTETIKRIAEAYSIRNITDSKLRKLEDS 141
Query: 186 TMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEV 245
+ +L S KG+G W+ M +IF+L + D + DL +RK ++ YG+ + +++
Sbjct: 142 DVLNLLCSFKGVGPWTAEMVLIFALDRWDHFSINDLILRKSVEKHYGISK-DNKKEIQRF 200
Query: 246 CEKWKPYRSVGSWYMW 261
+ P+R++ SWY+W
Sbjct: 201 LTDYSPFRTILSWYLW 216
>gi|152980259|ref|YP_001353797.1| DNA-3-methyladenine glycosylase II [Janthinobacterium sp.
Marseille]
gi|151280336|gb|ABR88746.1| DNA-3-methyladenine glycosylase II [Janthinobacterium sp.
Marseille]
Length = 215
Score = 113 bits (283), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 63/191 (32%), Positives = 102/191 (53%), Gaps = 4/191 (2%)
Query: 75 HLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGED 134
L +D +L LI F +LA+SI+ QQ++ KAA S++ RF+ +
Sbjct: 23 ELMKRDRILRKLIPQFGDLHLVGRGEAFSTLARSIIGQQISTKAADSVWQRFLEVC---P 79
Query: 135 NILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSV 194
P V+ +L G+S RKA Y+ DLA+ + ++ + EM+D + L +
Sbjct: 80 KCTPAQVIKAG-DKLATCGLSKRKAEYIFDLADHFKAKRVNCDKWAEMEDEEVIAELIQI 138
Query: 195 KGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRS 254
+GIG W+ MF+IF+L +P++LP+ DLG+ G+ Y E EV W+PYR+
Sbjct: 139 RGIGRWTAEMFLIFNLLRPNILPLDDLGLLAGISRNYFSGEPVSRSDAREVAANWEPYRT 198
Query: 255 VGSWYMWRLME 265
V +WY+WR ++
Sbjct: 199 VATWYLWRSLD 209
>gi|28198482|ref|NP_778796.1| DNA-3-methyladenine glycosidase [Xylella fastidiosa Temecula1]
gi|28056566|gb|AAO28445.1| DNA-3-methyladenine glycosidase [Xylella fastidiosa Temecula1]
Length = 216
Score = 113 bits (283), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 73/199 (36%), Positives = 104/199 (52%), Gaps = 6/199 (3%)
Query: 72 ALRHLRDKDPLLATLIDAHRP-PTFESSRSPFL---SLAKSILYQQLAYKAAKSIYTRFV 127
A +L DP L+ + P P R PF +LA++IL+QQL+ KAA +I R
Sbjct: 3 AYDYLYHCDPGLSGWMQRLGPLPALRRWRQPFNVVDALARAILFQQLSGKAASTIVARIE 62
Query: 128 ALFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGIL-SDESIVEMDDVT 186
A+ G + + + + LR GVS K LRDL + G L S + M T
Sbjct: 63 AVI-GSTCLYAETLACIDDACLRACGVSSNKILALRDLTRREVAGELPSVWQMGSMHHNT 121
Query: 187 MFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVC 246
+ + L ++GIG W+V M +IF L +PDVLPV DLGVRKG+Q + L +P +
Sbjct: 122 IVEKLIPIRGIGRWTVEMMLIFRLGRPDVLPVDDLGVRKGIQRVDSLAFVPTPKALCTRG 181
Query: 247 EKWKPYRSVGSWYMWRLME 265
E W PYR+ Y+WR+ +
Sbjct: 182 ECWAPYRTYAGLYLWRIAD 200
>gi|359785660|ref|ZP_09288807.1| DNA repair protein [Halomonas sp. GFAJ-1]
gi|359296893|gb|EHK61134.1| DNA repair protein [Halomonas sp. GFAJ-1]
Length = 208
Score = 113 bits (283), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 62/185 (33%), Positives = 101/185 (54%), Gaps = 18/185 (9%)
Query: 81 PLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNILPD- 139
PL+ + R P F + F S +I+ QQ++ +AA++I R + +LP+
Sbjct: 30 PLVGAPLPRERDPGFAT----FFS---TIVSQQISTEAARAIMGRV-------NTLLPEL 75
Query: 140 ---AVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKG 196
AVL V Q LRE G+S+RK Y + LAE G S + + +++D +T+++G
Sbjct: 76 HAKAVLEVEGQALREAGLSWRKIEYAKGLAEAELAGTFSADGLEQLNDNEAIAAITALRG 135
Query: 197 IGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVG 256
G WS ++++FSL +PD+ P DL +R L L G+ P + ++ E W P+RSVG
Sbjct: 136 FGRWSAEIYLMFSLQRPDIFPADDLALRVALGRLKGMDNKPTPKQARQLVEHWAPWRSVG 195
Query: 257 SWYMW 261
S ++W
Sbjct: 196 SLFLW 200
>gi|302661113|ref|XP_003022227.1| hypothetical protein TRV_03630 [Trichophyton verrucosum HKI 0517]
gi|291186164|gb|EFE41609.1| hypothetical protein TRV_03630 [Trichophyton verrucosum HKI 0517]
Length = 376
Score = 113 bits (282), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 74/235 (31%), Positives = 108/235 (45%), Gaps = 44/235 (18%)
Query: 72 ALRHLRDKDPLLATLIDAH-----RPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRF 126
A+ HL DP L +ID RP PF +L I+ QQ++ AAKSI ++F
Sbjct: 131 AIAHLLSVDPRLKPVIDKFPDAPFRPADLAVEIDPFQALVSGIIGQQVSGAAAKSIKSKF 190
Query: 127 VALFNGEDNI---------------------------LPDAVLAVSPQQLREIGVSYRKA 159
++LF+ P V+++ LR G+S RKA
Sbjct: 191 ISLFSVTTTTDTQVEADGDDEDEVGDAGLRYKPAPFPSPQQVVSMDIPTLRTAGLSQRKA 250
Query: 160 SYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVG 219
Y+ LA+K+ G LS ++ D + L +V+G+G WSV MF++F L + DV G
Sbjct: 251 EYIHGLADKFASGELSARMLLTASDEEVLDKLIAVRGLGKWSVEMFLLFGLKRMDVFSTG 310
Query: 220 DLGVRKGLQVLYG-----LKELPGA-------LKMEEVCEKWKPYRSVGSWYMWR 262
DLGV++G+ G LK G M E+ + PYRS+ WY+WR
Sbjct: 311 DLGVQRGMAAFAGRDVSKLKAKGGGKFKYMSEKDMVEIAAPFSPYRSLFMWYVWR 365
>gi|71731053|gb|EAO33121.1| HhH-GPD [Xylella fastidiosa Ann-1]
Length = 226
Score = 113 bits (282), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 74/203 (36%), Positives = 106/203 (52%), Gaps = 6/203 (2%)
Query: 68 EVDIALRHLRDKDPLLATLIDAHRP-PTFESSRSPFL---SLAKSILYQQLAYKAAKSIY 123
+V A +L DP L+ + P P R PF +LA++IL+QQL+ KAA +I
Sbjct: 9 DVMAAYDYLYHCDPGLSGWMQRLGPLPALRRWRQPFNVVDALARAILFQQLSGKAASTIV 68
Query: 124 TRFVALFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGIL-SDESIVEM 182
R A+ G + + + + LR GVS K LRDL + G L S + M
Sbjct: 69 ARIEAVI-GSTCLYAETLACIDDACLRACGVSSNKILALRDLTRREVAGELPSVWQMGSM 127
Query: 183 DDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKM 242
T+ + L ++GIG W+V M +IF L +PDVLPV DLGVRKG+Q + L +P +
Sbjct: 128 HHNTIVEKLIPIRGIGRWTVEMMLIFRLGRPDVLPVDDLGVRKGIQRVDSLAFVPTPKAL 187
Query: 243 EEVCEKWKPYRSVGSWYMWRLME 265
E W PYR+ Y+WR+ +
Sbjct: 188 CTRGECWAPYRTYAGLYLWRIAD 210
>gi|395761810|ref|ZP_10442479.1| DNA-3-methyladenine glycosylase II [Janthinobacterium lividum PAMC
25724]
Length = 224
Score = 113 bits (282), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 105/208 (50%), Gaps = 6/208 (2%)
Query: 55 NSPKIFKPLTFKGEVDIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQL 114
NS ++ + + E I L +D ++ LI PF +LA+S++ QQ+
Sbjct: 3 NSAQVIQVPHYWEEAKI---ELMKRDRIMKKLIPQFGDLHLVGHSDPFTTLARSLVGQQI 59
Query: 115 AYKAAKSIYTRFVALFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGIL 174
KAA + + + +A P VL +QL G+S RK Y+ DLA+ + +
Sbjct: 60 TPKAADAAWKKLLA---ACPKCTPSQVLKAGAEQLSACGLSKRKTEYILDLADHFKAKRV 116
Query: 175 SDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLK 234
+MDD + L ++GIG W+ MF+IF+L +P+VLP+ D G+ +G+ V Y
Sbjct: 117 HASQWDQMDDEAVIAELVQIRGIGRWTAEMFLIFNLLRPNVLPLDDPGLIQGISVNYFSG 176
Query: 235 ELPGALKMEEVCEKWKPYRSVGSWYMWR 262
E EV W+P+R+V +WY+WR
Sbjct: 177 EPVSRSDAREVSANWEPWRTVATWYLWR 204
>gi|182681159|ref|YP_001829319.1| HhH-GPD family protein [Xylella fastidiosa M23]
gi|417559179|ref|ZP_12210132.1| 3-Methyladenine DNA glycosylase AlkA [Xylella fastidiosa EB92.1]
gi|182631269|gb|ACB92045.1| HhH-GPD family protein [Xylella fastidiosa M23]
gi|338178263|gb|EGO81255.1| 3-Methyladenine DNA glycosylase AlkA [Xylella fastidiosa EB92.1]
Length = 226
Score = 113 bits (282), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 74/203 (36%), Positives = 106/203 (52%), Gaps = 6/203 (2%)
Query: 68 EVDIALRHLRDKDPLLATLIDAHRP-PTFESSRSPFL---SLAKSILYQQLAYKAAKSIY 123
+V A +L DP L+ + P P R PF +LA++IL+QQL+ KAA +I
Sbjct: 9 DVMAAYDYLYHCDPGLSGWMQRLGPLPALRRWRQPFNVVDALARAILFQQLSGKAASTIV 68
Query: 124 TRFVALFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGIL-SDESIVEM 182
R A+ G + + + + LR GVS K LRDL + G L S + M
Sbjct: 69 ARIEAVI-GSTCLYAETLACIDDACLRACGVSSNKILALRDLTRREVAGELPSVWQMGSM 127
Query: 183 DDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKM 242
T+ + L ++GIG W+V M +IF L +PDVLPV DLGVRKG+Q + L +P +
Sbjct: 128 HHNTIVEKLIPIRGIGRWTVEMMLIFRLGRPDVLPVDDLGVRKGIQRVDSLAFVPTPKAL 187
Query: 243 EEVCEKWKPYRSVGSWYMWRLME 265
E W PYR+ Y+WR+ +
Sbjct: 188 CTRGECWAPYRTYAGLYLWRIAD 210
>gi|421106158|ref|ZP_15566734.1| base excision DNA repair protein, HhH-GPD family [Leptospira
kirschneri str. H2]
gi|410008880|gb|EKO62540.1| base excision DNA repair protein, HhH-GPD family [Leptospira
kirschneri str. H2]
Length = 228
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 106/186 (56%), Gaps = 1/186 (0%)
Query: 76 LRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDN 135
LR KDP+ L+D+ ++ +P+ L KS+L QQL+ K A + R ++L +
Sbjct: 34 LRKKDPITKKLVDSIGLCKLKTIGTPYQVLIKSVLGQQLSVKVALTFERRLISLAGSKKI 93
Query: 136 ILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVK 195
P+ +L + ++R+IGVS K ++ +AE Y ++D + +++D + K+L S+K
Sbjct: 94 PSPEQILKIPNDEMRKIGVSQAKTETIKRIAEAYLKRSITDSKLHKLEDSDVLKLLCSIK 153
Query: 196 GIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSV 255
G+G W+ M +IF+L + D + DL +RK ++ YG+ + +++ + PYR++
Sbjct: 154 GVGPWTAEMVLIFALDRWDHFSINDLILRKSVEKHYGISK-DNKKEIQLFLNTYSPYRTI 212
Query: 256 GSWYMW 261
SWY+W
Sbjct: 213 LSWYLW 218
>gi|386084659|ref|YP_006000941.1| DNA-3-methyladenine glycosylase [Xylella fastidiosa subsp.
fastidiosa GB514]
gi|307579606|gb|ADN63575.1| DNA-3-methyladenine glycosylase [Xylella fastidiosa subsp.
fastidiosa GB514]
Length = 232
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/203 (36%), Positives = 106/203 (52%), Gaps = 6/203 (2%)
Query: 68 EVDIALRHLRDKDPLLATLIDAHRP-PTFESSRSPFL---SLAKSILYQQLAYKAAKSIY 123
+V A +L DP L+ + P P R PF +LA++IL+QQL+ KAA +I
Sbjct: 15 DVMAAYDYLYHCDPGLSGWMQRLGPLPALRRWRQPFNVVDALARAILFQQLSGKAASTIV 74
Query: 124 TRFVALFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGIL-SDESIVEM 182
R A+ G + + + + LR GVS K LRDL + G L S + M
Sbjct: 75 ARIEAVI-GSTCLYAETLACIDDACLRACGVSSNKILALRDLTRREVAGELPSVWQMGSM 133
Query: 183 DDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKM 242
T+ + L ++GIG W+V M +IF L +PDVLPV DLGVRKG+Q + L +P +
Sbjct: 134 HHNTIVEKLIPIRGIGRWTVEMMLIFRLGRPDVLPVDDLGVRKGIQRVDSLAFVPTPKAL 193
Query: 243 EEVCEKWKPYRSVGSWYMWRLME 265
E W PYR+ Y+WR+ +
Sbjct: 194 CTRGECWAPYRTYAGLYLWRIAD 216
>gi|119501178|ref|XP_001267346.1| DNA-3-methyladenine glycosylase, putative [Neosartorya fischeri
NRRL 181]
gi|119415511|gb|EAW25449.1| DNA-3-methyladenine glycosylase, putative [Neosartorya fischeri
NRRL 181]
Length = 362
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 93/289 (32%), Positives = 135/289 (46%), Gaps = 43/289 (14%)
Query: 5 NHTSDNI----SQNPSASSKITFPP--RKIR----KLTTITP--ITKIAEIPVATAISTN 52
N +DNI S +P + T PP R + T +TP + +A P + ++S +
Sbjct: 77 NAETDNIFGLISTDPPSRLHATPPPLDRPVEPHRTNATLLTPHGSSLVAYPPGSESLSPS 136
Query: 53 SDNSPKIFKPLTFKGEV-DIALRHLRDKDPLLATLIDAH-----RPPTFESSRSPFLSLA 106
P+ P G + + A+ HL D L LI H P PF SL
Sbjct: 137 KTGRPR---PTATTGTLLEKAVAHLIATDARLEPLIRRHPCSLFSPEGLAEEIDPFRSLV 193
Query: 107 KSILYQQLAYKAAKSIYTRFVALFNGEDNI----------LPDAVLAVSPQQLREIGVSY 156
SI+ QQ++ AA+SI +FVALFN E++ P+ V+ LR G+S
Sbjct: 194 SSIIGQQVSGAAARSIKDKFVALFNRENDGQDPAKPRRFPTPEEVVQCDLATLRTAGLSQ 253
Query: 157 RKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVL 216
RKA Y+ L++K+ G LS ++ D + + LT+V+G+G WSV MF F+L + DV
Sbjct: 254 RKAEYIHGLSQKFATGELSARMLLNASDEELMEKLTAVRGLGRWSVEMFACFALKRIDVF 313
Query: 217 PVGDLGVRKGLQVLYG-----LKELPGA-------LKMEEVCEKWKPYR 253
GDLGV++G G LK G M E+ K+ PYR
Sbjct: 314 STGDLGVQRGCAAFMGKDVSKLKAKGGGKFKYMAEKDMLELAAKFAPYR 362
>gi|432331969|ref|YP_007250112.1| HhH-GPD superfamily base excision DNA repair protein [Methanoregula
formicicum SMSP]
gi|432138678|gb|AGB03605.1| HhH-GPD superfamily base excision DNA repair protein [Methanoregula
formicicum SMSP]
Length = 200
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 110/201 (54%), Gaps = 7/201 (3%)
Query: 64 TFK-GEVDIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSI 122
TF+ G +IA HL+ +D L ID + + F +L + QQ++ KAA+++
Sbjct: 3 TFRYGRTEIA--HLKKRDKKLGAAIDEIGMIERDVTPDLFTALVVGVASQQISAKAAETV 60
Query: 123 YTRFVALFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEM 182
+ R I P ++ +P+++++ G+S RKA Y++ + + T+G L + ++
Sbjct: 61 WRRMEEKLG---TITPSSIAGATPEEIQQCGMSMRKAGYIKGIGDAVTNGSLDLAGLRDL 117
Query: 183 DDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKM 242
D + L+++ G+G W+ M +IFS+ +PDVL GDL +R+G+ LYG + A
Sbjct: 118 SDDDVIARLSALNGVGVWTAEMLLIFSMERPDVLSWGDLAIRRGMMHLYGKSTIDRA-AF 176
Query: 243 EEVCEKWKPYRSVGSWYMWRL 263
E +++ PY SV S Y+W +
Sbjct: 177 ERYRKRYSPYGSVASLYLWEI 197
>gi|347541873|ref|YP_004856509.1| DNA-3-methyladenine glycosylase II [Candidatus Arthromitus sp.
SFB-rat-Yit]
gi|346984908|dbj|BAK80583.1| DNA-3-methyladenine glycosylase II [Candidatus Arthromitus sp.
SFB-rat-Yit]
Length = 222
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 113/210 (53%), Gaps = 6/210 (2%)
Query: 70 DIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVAL 129
D A+ +L+ KD LA +ID E F S+ I+ QQ++ KA ++I+ R
Sbjct: 7 DEAVEYLKSKDKKLAWVIDHVGHIDREVDSDLFSSVVHHIIGQQISTKAHRTIWQRMNDY 66
Query: 130 FNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFK 189
+ P+ + + + +L+ +G+++RKA Y++D +EK T G ++ +M D
Sbjct: 67 LG---KVTPETINSANIAELQSLGMTFRKAEYIKDFSEKVTIGKFDLAAVKKMSDTEAID 123
Query: 190 MLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKW 249
L ++KGIG W+ M +IF L +P++L GDL + +G++++Y +E+ + E+ ++
Sbjct: 124 ALVNLKGIGVWTAEMILIFCLQRPNILSFGDLAILRGMRMVYQHREIDRK-QFEKYRKRL 182
Query: 250 KPYRSVGSWYMWRLMEAKGVLPNVAKAAVT 279
PY SV S Y W + A G +P A T
Sbjct: 183 SPYGSVASLYFWAV--AGGTVPGFTDPAPT 210
>gi|375007331|ref|YP_004980963.1| DNA-3-methyladenine glycosylase yfjP [Geobacillus thermoleovorans
CCB_US3_UF5]
gi|359286179|gb|AEV17863.1| DNA-3-methyladenine glycosylase yfjP [Geobacillus thermoleovorans
CCB_US3_UF5]
Length = 288
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 99/169 (58%), Gaps = 5/169 (2%)
Query: 102 FLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNIL-----PDAVLAVSPQQLREIGVSY 156
+ L K +++QQL K + RFV F E + + P+ + A S + LR + +S
Sbjct: 120 YFCLVKCLIHQQLHLKVGYRLTERFVKTFGEERDGVWFYPRPEEIAARSYEDLRALQLSG 179
Query: 157 RKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVL 216
RKA Y+ +++ +G L + + +M+D + + LT+V+GIG W+V F++F L +P+V
Sbjct: 180 RKAEYIVNVSRLIAEGKLRLDELEQMEDGEVMERLTAVRGIGPWTVQNFLLFGLGRPNVF 239
Query: 217 PVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSWYMWRLME 265
P D+G+++ ++ +GL + P +M + E+WKPY S + Y+WR +E
Sbjct: 240 PPADIGLQRAVEKWFGLPKRPTTKEMAALGERWKPYASYAALYLWRSIE 288
>gi|261197219|ref|XP_002625012.1| DNA-3-methyladenine glycosylase [Ajellomyces dermatitidis SLH14081]
gi|239595642|gb|EEQ78223.1| DNA-3-methyladenine glycosylase [Ajellomyces dermatitidis SLH14081]
Length = 438
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 81/260 (31%), Positives = 114/260 (43%), Gaps = 68/260 (26%)
Query: 72 ALRHLRDKDPLLATLIDAHRPPTFESSR-----SPFLSLAKSILYQQLAYKAAKSIYTRF 126
A+ HL P L +I+ H P F + PF SL I+ QQ++ AAKSI +F
Sbjct: 170 AVAHLIKVAPQLRPVIEKHPCPLFSPAGLAEEIDPFNSLVSGIIGQQVSGAAAKSIKKKF 229
Query: 127 VALF-----NGEDNILPDAVLAV------------------------------------- 144
+ALF G+ N + A +
Sbjct: 230 MALFRSDGGGGDCNSINSATATIATTVINDGGAATKNNNNMDAGEKIETAEMRYDRDDDF 289
Query: 145 -SPQQ--------LREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVK 195
+P Q LR G+S RKA Y++ LAEK+ G LS +++ D + + L +V+
Sbjct: 290 PTPAQVAKCDIATLRTAGLSQRKAEYIQGLAEKFASGELSARMLLQASDEEVLEKLIAVR 349
Query: 196 GIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYG-----LKELPGA-------LKME 243
G+G WSV MF F L + DV GDLGV++G+ G LK G +M
Sbjct: 350 GLGKWSVEMFSCFGLKRMDVFSTGDLGVQRGMAAFVGRDVSKLKAKGGGKFKYMSEKEMV 409
Query: 244 EVCEKWKPYRSVGSWYMWRL 263
EV + PYRS+ WYMWR+
Sbjct: 410 EVAAPFSPYRSLFMWYMWRI 429
>gi|392570360|gb|EIW63533.1| DNA glycosylase [Trametes versicolor FP-101664 SS1]
Length = 451
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 76/182 (41%), Positives = 100/182 (54%), Gaps = 20/182 (10%)
Query: 63 LTFKGEVDIALRHLRDKDPLLATLIDAHRPPTFESSR--SPFLSLAKSILYQQLAYKAAK 120
LTF E A RHL DP + + FE PF +LA SIL QQ+++KAA
Sbjct: 96 LTFSFEE--ARRHLVRVDPRFEDVFRRVKCRPFEHLERVDPFRTLAHSILGQQISWKAAA 153
Query: 121 SIYTRFVALFN--------GEDNILPDA--VLAVSPQQLREIGVSYRKASYLRDLAEKYT 170
SI +FV LF+ G N P A V+ LR G+S RKA Y+ DLA ++
Sbjct: 154 SITHKFVRLFDPSLPETCPGRSNFFPSAHQVITKDIATLRSAGLSGRKAEYVLDLAGRFA 213
Query: 171 DGILSDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVG-----DLGVRK 225
DG LS ++ DD ++KML V+GIG + MF +FSL +PD+LPVG DLGV+K
Sbjct: 214 DGRLSTRKLLLADDEELYKMLIEVRGIGR-VIDMFAMFSLRRPDILPVGKSSRWDLGVQK 272
Query: 226 GL 227
G+
Sbjct: 273 GM 274
Score = 41.6 bits (96), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 26/36 (72%), Gaps = 4/36 (11%)
Query: 234 KELPGAL----KMEEVCEKWKPYRSVGSWYMWRLME 265
K++ GAL +ME++ E W+PYRS+G +YMW L E
Sbjct: 413 KKVKGALLTPKEMEDLAECWQPYRSLGVYYMWALAE 448
>gi|403070444|ref|ZP_10911776.1| HhH-GPD family protein [Oceanobacillus sp. Ndiop]
Length = 229
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 115/206 (55%), Gaps = 6/206 (2%)
Query: 72 ALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFN 131
A +LR KD +L ID P E + F +L +I+ QQ++ KA ++++ R V++
Sbjct: 9 ATDYLRKKDKILGEAIDRIGPIEREIMTNIFEALVNNIVGQQISMKALETVWKRMVSMIG 68
Query: 132 GEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKML 191
I P+ + S ++++ G+S RKA Y++ A++ G L ES+ ++ D + + L
Sbjct: 69 ---TITPENIAGKSAKEIQACGISMRKAEYIKLAADQVMSGELEIESLYDLPDEAVIERL 125
Query: 192 TSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKP 251
+ +KGIG W+ M +IFS+ + +++ DL + +GL++LY + + L ++ ++ P
Sbjct: 126 SELKGIGIWTAEMILIFSMQRANIMSWNDLAIHRGLRMLYHHRRIDKKL-FDKYKRRYTP 184
Query: 252 YRSVGSWYMWRLMEAKGVLPNVAKAA 277
Y SV S Y+W + A G +P + A
Sbjct: 185 YASVASLYLWEI--ATGAIPGMKDYA 208
>gi|401880891|gb|EJT45201.1| DNA-3-methyladenine glycosidase [Trichosporon asahii var. asahii
CBS 2479]
Length = 588
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/172 (40%), Positives = 99/172 (57%), Gaps = 16/172 (9%)
Query: 72 ALRHLRDKDPLLATLID--AHRPPTFESSRS-----PFLSLAKSILYQQLAYKAAKSIYT 124
AL HL DP A L + +P R+ PF SL SI+ QQ+++ AA+SI
Sbjct: 162 ALAHLSAADPRFAKLSERVPCKPFLGPDGRNGHKDDPFRSLVTSIIGQQVSWMAARSITK 221
Query: 125 RFVALF----NGEDN-----ILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILS 175
RF+ F +GE+ P+ V A + L+ +G S RK+ Y+ +LA + G LS
Sbjct: 222 RFIEFFCGPVDGEERGDWPFPTPEQVAASNILDLKGVGFSTRKSEYVIELAGHFAAGRLS 281
Query: 176 DESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGL 227
E+++ D + LT+V+GIG W+V MF+IF+L + DVLPVGDLGV+KGL
Sbjct: 282 TEALLTAPDEDVLAALTAVRGIGKWTVDMFLIFTLRRGDVLPVGDLGVQKGL 333
>gi|359685109|ref|ZP_09255110.1| DNA-3-methyladenine glycosylase II [Leptospira santarosai str.
2000030832]
gi|422004985|ref|ZP_16352191.1| DNA-3-methyladenine glycosylase II [Leptospira santarosai serovar
Shermani str. LT 821]
gi|417256355|gb|EKT85780.1| DNA-3-methyladenine glycosylase II [Leptospira santarosai serovar
Shermani str. LT 821]
Length = 226
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 108/196 (55%), Gaps = 5/196 (2%)
Query: 70 DIALRH----LRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTR 125
DI LR LR KDP+ LID+ P + +P+ L KS+L QQL+ K A + R
Sbjct: 22 DIRLRKASDWLRKKDPITKKLIDSVGPCKLRTIGTPYQVLIKSVLGQQLSVKVALTFERR 81
Query: 126 FVALFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDV 185
++L P+ +L + +L++IGVS K ++ +AE Y+ ++D + +++D
Sbjct: 82 LISLAGSRKIPPPNRILTIPNGKLKKIGVSQAKTETIKRIAEAYSIRNITDSKLRKLEDS 141
Query: 186 TMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEV 245
+ +L S KG+G W+ M +IF+L + D + DL +RK ++ YG+ + +++
Sbjct: 142 DVLNLLCSFKGVGPWTAEMVLIFALDRWDHFSINDLILRKSVEKHYGISK-DNKKEIQRF 200
Query: 246 CEKWKPYRSVGSWYMW 261
+ P+R++ SWY+W
Sbjct: 201 LTGYSPFRTILSWYLW 216
>gi|170092255|ref|XP_001877349.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164647208|gb|EDR11452.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 415
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 72/187 (38%), Positives = 102/187 (54%), Gaps = 21/187 (11%)
Query: 112 QQLAYKAAKSIYTRFVALFNGEDNILPDAVLAVS-------PQQ--------LREIGVSY 156
QQ+++ AA+SI RF+ L++ PD + S PQ LR G+S
Sbjct: 130 QQISWLAARSITHRFIRLYHPSIPEKPDHQMMKSYLHLFPTPQDIVDTDIATLRTAGLSA 189
Query: 157 RKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVL 216
RKA Y++DLA ++ DG LS E ++ DD ++ +L V+GIG W+V MF IFSL +PD+L
Sbjct: 190 RKAEYVKDLASRFVDGRLSTEKLLNADDDDLYSILIEVRGIGRWTVDMFAIFSLRRPDIL 249
Query: 217 PVGDLGVRKGLQVLYGLKELPG---ALKMEEVCEKWKPYRSVGSWYMWRLMEAKGVLPNV 273
PVGDLGV++GL + LP AL E+V + K S+ + E+ LP V
Sbjct: 250 PVGDLGVQRGLVRWFLSLHLPTHLFALSPEKVSGQGK---SIEATLNLSASESDDALPEV 306
Query: 274 AKAAVTS 280
AA S
Sbjct: 307 VDAAYKS 313
Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 33/59 (55%), Gaps = 9/59 (15%)
Query: 213 PDVLPVGDLGVRKGLQVLYGLKELPGAL----KMEEVCEKWKPYRSVGSWYMWRLMEAK 267
P+ L V L R L G K++ GA +M + E+WKPYRS+G +YMW L A+
Sbjct: 362 PEGLTVATLKSR-----LEGKKKIRGAFLTPQEMAALTERWKPYRSLGVYYMWSLAAAE 415
>gi|336413055|ref|ZP_08593408.1| hypothetical protein HMPREF1017_00516 [Bacteroides ovatus
3_8_47FAA]
gi|335943101|gb|EGN04943.1| hypothetical protein HMPREF1017_00516 [Bacteroides ovatus
3_8_47FAA]
Length = 228
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 65/195 (33%), Positives = 105/195 (53%), Gaps = 6/195 (3%)
Query: 67 GEVDIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRF 126
GE +IA +L+ +D L +ID F +L SI+ QQ+A KA ++I+ +
Sbjct: 8 GEHEIA--YLKSRDKRLGEIIDKVGMVKRRVIPDLFAALVHSIVGQQIATKAHETIWRKM 65
Query: 127 VALFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVT 186
+ I P+ VL +SP++L+ G+++RK +R A K G S+ M D
Sbjct: 66 TGVLG---EISPEKVLGLSPEELQAFGITFRKVDCIRSAARKIASGEFDIHSLRTMSDAE 122
Query: 187 MFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVC 246
+ L+ + GIG W+ M M+ SL +PDVL GDL V++GL++LY +++ L E+
Sbjct: 123 VCAKLSELDGIGVWTAEMLMLHSLQRPDVLSFGDLAVQRGLRMLYHHRKITRPL-FEKYR 181
Query: 247 EKWKPYRSVGSWYMW 261
++ PY SV Y+W
Sbjct: 182 RRYSPYGSVACIYLW 196
>gi|352684693|ref|YP_004896678.1| hypothetical protein Acin_1315 [Acidaminococcus intestini RyC-MR95]
gi|350279348|gb|AEQ22538.1| hypothetical protein Acin_1315 [Acidaminococcus intestini RyC-MR95]
Length = 219
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 63/195 (32%), Positives = 110/195 (56%), Gaps = 4/195 (2%)
Query: 72 ALRHLRDKDPLLATLIDAHRPPTFE-SSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALF 130
++++L KD L +I P T+E + +PF L I+ Q L+ KA IY RF L
Sbjct: 13 SVQYLCKKDKRLTKVISMVGPITYEPHTDNPFPFLIHEIIEQMLSIKAGAKIYGRFEELC 72
Query: 131 NGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKM 190
G+ I P+++ +S ++++ IG S KA+Y+++ A G L +M D K
Sbjct: 73 AGQ--ITPESISKLSVEEIKAIGTSTAKANYIKNAASAVLTGELDFTKFPDMTDEAALKE 130
Query: 191 LTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWK 250
L S++GIG W+ M++IF L + D+LP D+ + + LY +++ A +E+ C+KWK
Sbjct: 131 LVSLRGIGTWTAKMYLIFVLDRQDILPFEDVAFLQSYKWLYKTEDVSRA-SIEKKCKKWK 189
Query: 251 PYRSVGSWYMWRLME 265
PY S+ + +++R ++
Sbjct: 190 PYSSIAARFLYRALD 204
>gi|354559127|ref|ZP_08978379.1| HhH-GPD family protein [Desulfitobacterium metallireducens DSM
15288]
gi|353544297|gb|EHC13752.1| HhH-GPD family protein [Desulfitobacterium metallireducens DSM
15288]
Length = 200
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 61/191 (31%), Positives = 105/191 (54%), Gaps = 4/191 (2%)
Query: 73 LRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNG 132
+ L+ KD L I+ E PF +L S++ QQ++ KAA ++++R L
Sbjct: 11 MECLKRKDKRLGEAIEKIGMIQREILPDPFTALISSVVSQQISNKAAATVWSRLTTLLG- 69
Query: 133 EDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLT 192
+I P+ + V ++ G+S RKA Y++ +A+ +G + ++ D + K L+
Sbjct: 70 --SITPECIAQVDQSAIQGCGMSVRKAGYIKGIADAAMNGTVDFANLHTFQDEEIIKKLS 127
Query: 193 SVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPY 252
S+ G+G W+ M +IFSL +PDV+ DL + +G+ LYGLK+L K E +++ PY
Sbjct: 128 SLHGVGIWTAEMLLIFSLSRPDVVSYRDLAICRGMMNLYGLKDLSKE-KFERYRKRYSPY 186
Query: 253 RSVGSWYMWRL 263
S+ S Y+W+L
Sbjct: 187 GSIASLYLWQL 197
>gi|319762812|ref|YP_004126749.1| DNA-3-methyladenine glycosylase ii [Alicycliphilus denitrificans
BC]
gi|330824892|ref|YP_004388195.1| DNA-3-methyladenine glycosylase II [Alicycliphilus denitrificans
K601]
gi|317117373|gb|ADU99861.1| DNA-3-methyladenine glycosylase II [Alicycliphilus denitrificans
BC]
gi|329310264|gb|AEB84679.1| DNA-3-methyladenine glycosylase II [Alicycliphilus denitrificans
K601]
Length = 215
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/195 (33%), Positives = 106/195 (54%), Gaps = 11/195 (5%)
Query: 72 ALRHLRDKDPLLATLIDAHRPPTFESSRSP----FLSLAKSILYQQLAYKAAKSIYTRFV 127
A +HL +D ++ LI P + + P F +LA+SI+ QQ++ +A+ ++ +F
Sbjct: 19 ACKHLTKRDRVMRRLI----PQVGDVAPYPRGDAFSTLARSIVGQQVSVASAQRVWDQFA 74
Query: 128 ALFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTM 187
AL ++ P +VL + +R G+S RK YL DLA + G L + +MDD +
Sbjct: 75 AL---PRSMTPRSVLKLKVDDMRAAGLSARKVEYLVDLALHFDSGQLHVKQWGQMDDAAI 131
Query: 188 FKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCE 247
L +++GI W+ MF+IF L +P+VLP+ D + +G+ Y + EV E
Sbjct: 132 VAELVAIRGISRWTADMFLIFHLARPNVLPLDDTTLIQGISRHYFSGDPVSRSDAREVAE 191
Query: 248 KWKPYRSVGSWYMWR 262
WKP+ SV SWY+WR
Sbjct: 192 AWKPWCSVASWYIWR 206
>gi|319654159|ref|ZP_08008248.1| YfjP protein [Bacillus sp. 2_A_57_CT2]
gi|317394093|gb|EFV74842.1| YfjP protein [Bacillus sp. 2_A_57_CT2]
Length = 293
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 103/196 (52%), Gaps = 5/196 (2%)
Query: 75 HLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGE- 133
H ++ L + DAH P+ + K I++QQL A ++ RFV F E
Sbjct: 98 HEHFQNTELQPIFDAHYGTPIVLDFDPYSCILKCIIHQQLNLAFAHTLTERFVKAFGFEK 157
Query: 134 DNI----LPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFK 189
D + LP+ V + +LRE+ S RKA Y+ +A++ G L+ + + + D ++
Sbjct: 158 DGVWFYPLPEKVAELKVDELRELQFSGRKAEYVIGIAKETASGNLNFDELKNLSDEEIYD 217
Query: 190 MLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKW 249
L ++G+G W+V F++F L +P++ P D+G++ L+ LY L+ P +ME + W
Sbjct: 218 KLIKLRGVGPWTVQNFLMFGLGRPNLFPAADIGIQNALKKLYKLEAKPTLEEMETFSKSW 277
Query: 250 KPYRSVGSWYMWRLME 265
PY S S Y+WR +E
Sbjct: 278 DPYLSYASLYLWRSIE 293
>gi|317470764|ref|ZP_07930148.1| HhH-GPD superfamily base excision DNA repair protein [Anaerostipes
sp. 3_2_56FAA]
gi|316901753|gb|EFV23683.1| HhH-GPD superfamily base excision DNA repair protein [Anaerostipes
sp. 3_2_56FAA]
Length = 214
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 115/207 (55%), Gaps = 8/207 (3%)
Query: 67 GEVDIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRF 126
GE +I +L+ +DP+L ID E F +L SI+ QQ++ KA ++++ R
Sbjct: 7 GEQEIG--YLKSRDPVLGQAIDRIGFIKREVHTELFAALVNSIVGQQISTKAQETVWRR- 63
Query: 127 VALFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVT 186
+ +G ++ P+ V + ++L+ G+S+RKA Y++ A++ G L E + E D
Sbjct: 64 --IKDGLSDVTPEKVGECTEEELQSFGISFRKAGYIKAAADRILSGSLDLEGLKEAGDEQ 121
Query: 187 MFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVC 246
+ K LT + G+G W+ M M FS+ +PD++ DL +++G+++LY + + L +
Sbjct: 122 VKKELTKLPGVGVWTAEMLMTFSMQRPDIVSYSDLAIQRGMRMLYHHRTITPKL-FAKYA 180
Query: 247 EKWKPYRSVGSWYMWRLMEAKGVLPNV 273
++ PY +V S Y+W + A G LP +
Sbjct: 181 GRYSPYGTVASLYLWAV--AGGALPEL 205
>gi|345888588|ref|ZP_08839663.1| hypothetical protein HMPREF0178_02437 [Bilophila sp. 4_1_30]
gi|345040544|gb|EGW44789.1| hypothetical protein HMPREF0178_02437 [Bilophila sp. 4_1_30]
Length = 403
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 64/192 (33%), Positives = 103/192 (53%), Gaps = 4/192 (2%)
Query: 72 ALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFN 131
AL L+ +D L +I+ P F +L S++ QQ++ +AA++I R L
Sbjct: 202 ALDALKRRDKRLGRVIERLGPIRRGVEPDLFTALVDSVIAQQISGRAAQTISDRLHGLVG 261
Query: 132 GEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKML 191
N P + P Q+++ G+S RK Y++ +A + G L E++ D + + L
Sbjct: 262 ---NFTPQGLAEAEPSQIQQCGLSQRKVGYIQGIAREVASGALDLEALRHAPDEELIREL 318
Query: 192 TSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKP 251
+++ GIG W+ M MIFSL +PDVL GDLG+R+G+ +LYG + E +++ P
Sbjct: 319 SALNGIGVWTAEMLMIFSLCRPDVLSWGDLGIRRGMALLYG-DRELTRERFERRRKRYSP 377
Query: 252 YRSVGSWYMWRL 263
Y SV S Y+W L
Sbjct: 378 YGSVVSLYLWSL 389
>gi|448746032|ref|ZP_21727702.1| DNA glycosylase [Halomonas titanicae BH1]
gi|445566760|gb|ELY22866.1| DNA glycosylase [Halomonas titanicae BH1]
Length = 208
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 104/197 (52%), Gaps = 11/197 (5%)
Query: 69 VDIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVA 128
++ A+ L + DP +A + P+ F + +I+ QQL+ +AA++I R
Sbjct: 11 IEHAMAELVEADPDIAHALPLVGAPSPRERDKGFATFFSTIVSQQLSTEAARAIMGRV-- 68
Query: 129 LFNGEDNILPD----AVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDD 184
+ +LP+ AV+ V Q LR+ G+S+RK Y + LAE G S + ++ D
Sbjct: 69 -----NTLLPELHAKAVMEVEGQALRDAGLSWRKIEYAKGLAEAELAGTFSAVGLEQLSD 123
Query: 185 VTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEE 244
+T ++G G WS ++++FSL +PD+ P DL +R L L G+ + P + +
Sbjct: 124 DEAIAAITELRGFGRWSAEIYLMFSLQRPDIFPADDLALRVALGRLKGMDDKPTPKQARQ 183
Query: 245 VCEKWKPYRSVGSWYMW 261
+ E W P+RSVGS ++W
Sbjct: 184 LVEHWAPWRSVGSLFLW 200
>gi|221068473|ref|ZP_03544578.1| HhH-GPD family protein [Comamonas testosteroni KF-1]
gi|220713496|gb|EED68864.1| HhH-GPD family protein [Comamonas testosteroni KF-1]
Length = 280
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/203 (33%), Positives = 111/203 (54%), Gaps = 11/203 (5%)
Query: 72 ALRHLRDKDPLLATLI-----DAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRF 126
A R L +D +L LI A P E + F +LA+SI+ QQ++ K+AK+++ +F
Sbjct: 83 ACRQLMRRDRVLKRLIPQLGSQALLPCGQEQA---FATLARSIIGQQISAKSAKTLWNKF 139
Query: 127 VALFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVT 186
L + P+ VL + +R G+S RK YL DLA +T+ L + +M D
Sbjct: 140 AKLPAA---MQPEQVLRLKVDDMRGAGLSARKVDYLVDLALHFTEHRLHMDEWAQMSDEV 196
Query: 187 MFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVC 246
+ L S++G+ W+ F+I+ L +P+VLP+ D G+ +G+ + + + EV
Sbjct: 197 IIAELMSIRGLSRWTAENFLIYCLGRPNVLPLDDAGLIQGISLNHFSGDPVSRSDAREVA 256
Query: 247 EKWKPYRSVGSWYMWRLMEAKGV 269
E WKP+ +V +WY+WR +EA+ V
Sbjct: 257 EAWKPWCTVATWYIWRSLEAQPV 279
>gi|387927652|ref|ZP_10130331.1| YfjP [Bacillus methanolicus PB1]
gi|387589796|gb|EIJ82116.1| YfjP [Bacillus methanolicus PB1]
Length = 286
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 107/206 (51%), Gaps = 5/206 (2%)
Query: 65 FKGEVDIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYT 124
F+ + + H ++ L + D H +P+ L K I++QQL A ++
Sbjct: 81 FQWNIPLVNIHAHFQNTALKKIFDEHYGTPLVLDFNPYNCLLKCIIHQQLNLAFAHTLTE 140
Query: 125 RFVALFNGEDNI-----LPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESI 179
RFV F ++ LP+ + +++ +QLRE+ S RKA Y+ +A++ L + +
Sbjct: 141 RFVKTFGFQEKGVWFYPLPEKLASLTVEQLRELQFSGRKAEYVIGIAKETAKRRLRFDEL 200
Query: 180 VEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGA 239
+ D + + L ++G+G W+V F+IF L +P++ P D+G++ L+ LY L+ P
Sbjct: 201 EKKSDEEIMEKLIKLRGVGPWTVQNFLIFGLGRPNLFPTADIGIQNALKKLYNLERKPTL 260
Query: 240 LKMEEVCEKWKPYRSVGSWYMWRLME 265
+M E + W PY S S Y+WR +E
Sbjct: 261 EEMNEYKKNWAPYLSYASLYLWRSIE 286
>gi|448688094|ref|ZP_21693989.1| DNA-3-methyladenine glycosylase [Haloarcula japonica DSM 6131]
gi|445779623|gb|EMA30542.1| DNA-3-methyladenine glycosylase [Haloarcula japonica DSM 6131]
Length = 203
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 60/186 (32%), Positives = 101/186 (54%), Gaps = 6/186 (3%)
Query: 80 DPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNILPD 139
DP + L++ H T + + F L SIL QQ++ +A + R LF+ + P
Sbjct: 12 DPDIGPLVETHGELTLDPASDLFERLVVSILRQQVSMASAAATRER---LFDAV-TVTPA 67
Query: 140 AVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIGA 199
+ + LR+ G+S +K Y+ ++A+ + + S E+ + D + + LT++ G+G
Sbjct: 68 GIRDADDEVLRDAGLSRQKTRYVNEVADTFLEHGYSMETFEDTTDEEIHEELTTITGVGD 127
Query: 200 WSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSWY 259
W+ +M ++F+ + DV PVGDLG+RKG + + G E +M E E+W PYRS S Y
Sbjct: 128 WTANMQLLFAFGREDVFPVGDLGIRKGFEAVVG--EGYSRAEMREYAERWSPYRSYASLY 185
Query: 260 MWRLME 265
+WR E
Sbjct: 186 LWRASE 191
>gi|402835250|ref|ZP_10883826.1| base excision DNA repair protein, HhH-GPD family [Selenomonas sp.
CM52]
gi|402275712|gb|EJU24850.1| base excision DNA repair protein, HhH-GPD family [Selenomonas sp.
CM52]
Length = 213
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 64/195 (32%), Positives = 110/195 (56%), Gaps = 6/195 (3%)
Query: 67 GEVDIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRF 126
GE +IA +L+ KD LA +I++ F ++ I+ QQ++ KA ++++ R
Sbjct: 7 GEKEIA--YLKSKDKKLAAVIESLGVLERPVHDDVFSAVVHHIIGQQISTKAQEAVWARL 64
Query: 127 VALFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVT 186
D +L++ ++L+ +G S+RK Y+ D AEK + + ++ M D
Sbjct: 65 CEKVGTMD---AAHLLSLGREELQAVGTSFRKVDYIMDFAEKVANRDFNIAALYAMSDDE 121
Query: 187 MFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVC 246
+ L+S+KGIGAW+ M +IF+L +PDVL GDLG+++GL++LY KE+ + E
Sbjct: 122 VICALSSLKGIGAWTAEMLLIFTLRRPDVLSFGDLGIQRGLRMLYRHKEID-RRRFERYK 180
Query: 247 EKWKPYRSVGSWYMW 261
+++ PY S S Y+W
Sbjct: 181 KRYSPYASTASLYLW 195
>gi|398815899|ref|ZP_10574559.1| 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase
[Brevibacillus sp. BC25]
gi|398033625|gb|EJL26919.1| 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase
[Brevibacillus sp. BC25]
Length = 309
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/219 (31%), Positives = 112/219 (51%), Gaps = 16/219 (7%)
Query: 64 TFKGEVDIAL--RHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKS 121
TF ++D+++ +R++ L A L + R F + K+I+ QQ+ A +
Sbjct: 87 TFSADLDLSVIYEQMREEKEL-AILTERFRGLRPMLDTDLFQCMVKTIIGQQINLTFAAN 145
Query: 122 IYTRFVALF-------NGEDNI---LPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTD 171
+ R V L NGE I PDAV ++ + LR + S RKA Y+ D A +
Sbjct: 146 LTERLVTLAGDPVENPNGEGIIAFPTPDAVARLTVEDLRTLQFSQRKAEYIIDFARAIVN 205
Query: 172 GILSDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLY 231
+ E + M D + LTS++GIG W+V ++F + +PD+LP D+G+R G+ LY
Sbjct: 206 ETVDLERLWTMKDEEIITYLTSLRGIGRWTVECLLMFGMGRPDLLPAADIGLRNGMVHLY 265
Query: 232 GLKELPGALKMEEVCEKWKPYRSVGSWYMWRLMEAKGVL 270
GL P + ++ EKW P+RS+ Y+W EA G +
Sbjct: 266 GLNSKPNENDIRKLGEKWAPWRSIYCLYVW---EAVGAI 301
>gi|392970484|ref|ZP_10335889.1| DNA-3-methyladenine glycosylase [Staphylococcus equorum subsp.
equorum Mu2]
gi|392511524|emb|CCI59108.1| DNA-3-methyladenine glycosylase [Staphylococcus equorum subsp.
equorum Mu2]
Length = 221
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 103/193 (53%), Gaps = 2/193 (1%)
Query: 70 DIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVAL 129
D ++ L KD LA LI +P SL +SI+ QQ+ K A SI+ +
Sbjct: 14 DDCVQQLIKKDATLALLIKKVGNLQINIRPNPLKSLIRSIIGQQITVKVAASIFEQLTDA 73
Query: 130 FNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFK 189
N E + D + + Q++ G+S K +Y+ +L G L E++ ++ + + +
Sbjct: 74 INDEWTV--DKLSEIEDTQMKSFGLSKSKINYIHNLVTHIQHGKLDLENLHKLSNDEVIR 131
Query: 190 MLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKW 249
LT VKGIG W+ +F++F+L +PDV+PV D+G+++ Q LYG + ++ E+W
Sbjct: 132 TLTEVKGIGQWTAEVFLLFTLQRPDVVPVHDVGLQRSAQWLYGTTKAQRKAQLALCSERW 191
Query: 250 KPYRSVGSWYMWR 262
K S+G++Y+W
Sbjct: 192 KHCASIGAFYLWE 204
>gi|424068521|ref|ZP_17805975.1| DNA-3-methyladenine glycosylase II [Pseudomonas syringae pv.
avellanae str. ISPaVe013]
gi|407997375|gb|EKG37814.1| DNA-3-methyladenine glycosylase II [Pseudomonas syringae pv.
avellanae str. ISPaVe013]
Length = 221
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 59/170 (34%), Positives = 97/170 (57%), Gaps = 5/170 (2%)
Query: 97 SSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNILP--DAVLAVSPQQLREIGV 154
S++ PF +L K++ YQQL KA +I R ALF D P A++ + Q LR G
Sbjct: 42 SAQDPFQALIKAVAYQQLHAKAGDAIVMRLRALF--PDTAFPAAQALIDLDEQTLRSCGF 99
Query: 155 SYRKASYLRDLAEKYTDGILSDES-IVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKP 213
S K ++ +A ++G++ D S + M + + L + G+G W+V M +I+ L +
Sbjct: 100 SASKCRAIKAIAVARSNGLVPDISDALAMSNEELVARLVQLPGVGRWTVEMMLIYGLGQM 159
Query: 214 DVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSWYMWRL 263
DV+P D GV +G + LY L+ PG +M + E++ P+R+V +WY+WR+
Sbjct: 160 DVMPASDYGVCEGYRRLYALELKPGHKEMAAMAERFAPFRTVAAWYLWRV 209
>gi|403045546|ref|ZP_10901022.1| DNA-3-methyladenine glycosidase [Staphylococcus sp. OJ82]
gi|402764367|gb|EJX18453.1| DNA-3-methyladenine glycosidase [Staphylococcus sp. OJ82]
Length = 217
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 103/193 (53%), Gaps = 2/193 (1%)
Query: 70 DIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVAL 129
D ++ L KD LA LI +P SL +SI+ QQ+ K A SI+ +
Sbjct: 10 DDCVQQLIKKDATLALLIKKVGNLQINIRPNPLKSLIRSIIGQQITVKVAASIFEQLTDA 69
Query: 130 FNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFK 189
N E + D + + Q++ G+S K +Y+ +L G L E++ ++ + + +
Sbjct: 70 INDEWTV--DKLSEIEDTQMKSFGLSKSKINYIHNLVTHIQHGKLDLENLHKLSNDEVIR 127
Query: 190 MLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKW 249
LT VKGIG W+ +F++F+L +PDV+PV D+G+++ Q LYG + ++ E+W
Sbjct: 128 TLTEVKGIGQWTAEVFLLFTLQRPDVVPVHDVGLQRSAQWLYGTTKAQRKAQLALCSERW 187
Query: 250 KPYRSVGSWYMWR 262
K S+G++Y+W
Sbjct: 188 KHCASIGAFYLWE 200
>gi|406697130|gb|EKD00396.1| DNA-3-methyladenine glycosidase [Trichosporon asahii var. asahii
CBS 8904]
Length = 492
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 59/136 (43%), Positives = 86/136 (63%), Gaps = 9/136 (6%)
Query: 101 PFLSLAKSILYQQLAYKAAKSIYTRFVALF----NGEDN-----ILPDAVLAVSPQQLRE 151
PF SL SI+ QQ+++ AA+SI RF+ F +GE+ P+ V A + L+
Sbjct: 198 PFRSLVTSIIGQQVSWMAARSITKRFIEFFCGPVDGEERGDWPFPTPEQVAASNILDLKG 257
Query: 152 IGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLH 211
+G S RK+ Y+ +LA + G LS E+++ D + LT+V+GIG W+V MF+IF+L
Sbjct: 258 VGFSTRKSEYVIELAGHFAAGRLSTEALLTAPDEDVLAALTAVRGIGKWTVDMFLIFTLR 317
Query: 212 KPDVLPVGDLGVRKGL 227
+ DVLPVGDLGV+KGL
Sbjct: 318 RGDVLPVGDLGVQKGL 333
>gi|325289647|ref|YP_004265828.1| DNA-3-methyladenine glycosylase II [Syntrophobotulus glycolicus DSM
8271]
gi|324965048|gb|ADY55827.1| DNA-3-methyladenine glycosylase II [Syntrophobotulus glycolicus DSM
8271]
Length = 231
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 68/209 (32%), Positives = 113/209 (54%), Gaps = 12/209 (5%)
Query: 67 GEVDIALRHLRDKDPLLATLIDAHRPPTFESSRSP--FLSLAKSILYQQLAYKAAKSIYT 124
GE +IA +LR +DPLL ID E P F++L +I+ QQ++ KA +I+
Sbjct: 10 GEKEIA--YLRSRDPLLGVAID--EIGQIERVVIPDLFMALVNTIVGQQISTKAQATIWA 65
Query: 125 RFVALFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDD 184
R F + P+ + + ++LR G+S RKASY++++A +G L + + D
Sbjct: 66 RMREQFV---PLTPEIIGTATAEELRTCGISLRKASYIKEIAGSVLNGSLDLAHLQTLPD 122
Query: 185 VTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEE 244
+ L+ +KGIG W+ M M FS+ +PDV+ GDL + +GL++LY +++ L
Sbjct: 123 DEVCLYLSQIKGIGVWTAEMLMTFSMQRPDVMSAGDLAILRGLRMLYHHRKITPKL-FAR 181
Query: 245 VCEKWKPYRSVGSWYMWRLMEAKGVLPNV 273
++ PY +V S Y+W + A G P +
Sbjct: 182 YKRRYSPYATVASLYLWAI--AGGACPGL 208
>gi|431794172|ref|YP_007221077.1| HhH-GPD superfamily base excision DNA repair protein
[Desulfitobacterium dichloroeliminans LMG P-21439]
gi|430784398|gb|AGA69681.1| HhH-GPD superfamily base excision DNA repair protein
[Desulfitobacterium dichloroeliminans LMG P-21439]
Length = 197
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 63/191 (32%), Positives = 105/191 (54%), Gaps = 4/191 (2%)
Query: 73 LRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNG 132
+ HL+ +DP+L ID E + F +L S++ QQ++ KAA++++ R L G
Sbjct: 10 IEHLKAQDPVLGQAIDQIGMIEREVTPQLFEALISSVVSQQISKKAAETVWNRLQTLL-G 68
Query: 133 EDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLT 192
E N + + + ++ G+S RKA Y++ +AE G + E + + D + K+L
Sbjct: 69 EVN--AEQIDQTELEAIQGCGMSMRKAGYIKGIAEAAQRGEVDFEKLPTLSDDEIIKLLP 126
Query: 193 SVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPY 252
++ G+G W+ M +IFSL +PDV+ DL +R+G+ YGL EL + +K+ PY
Sbjct: 127 ALPGVGVWTAEMLLIFSLCRPDVVSFKDLAIRRGMMNCYGLNELTKE-TFDHYRQKYSPY 185
Query: 253 RSVGSWYMWRL 263
SV S Y+W L
Sbjct: 186 GSVASLYLWAL 196
>gi|297539848|ref|YP_003675617.1| DNA-3-methyladenine glycosylase II [Methylotenera versatilis 301]
gi|297259195|gb|ADI31040.1| DNA-3-methyladenine glycosylase II [Methylotenera versatilis 301]
Length = 206
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 65/197 (32%), Positives = 106/197 (53%), Gaps = 8/197 (4%)
Query: 72 ALRHLRDKDPLLATLIDAHRPPTFES--SRSPFLSLAKSILYQQLAYKAAKSIYTRFVAL 129
A + L + D A LI+ FE +R P+ +L +++ YQQL KA +I R +++
Sbjct: 11 ATKFLTNLDADWARLIETVGECQFEPKPAREPYEALIRAVAYQQLHAKAGDAIIKRLLSI 70
Query: 130 FNGEDNILPDA--VLAVSPQQLREIGVSYRKASYLRDLAEKYTDGIL-SDESIVEMDDVT 186
+ + P A +LA LR G S RK ++ +AE G++ + M D
Sbjct: 71 YG---DAFPAASQLLATDFVNLRACGFSARKIETIQGIAEGAISGLVPTRTEAASMADED 127
Query: 187 MFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVC 246
+ L ++KGIG W+V M ++F++ + DVLP D GV +G + L LK P ++ E+
Sbjct: 128 LILRLVTLKGIGRWTVEMLLMFTMARMDVLPADDFGVVQGYKRLKKLKVAPTRKEITEIG 187
Query: 247 EKWKPYRSVGSWYMWRL 263
+ W PYR++ SWY+WR+
Sbjct: 188 KTWSPYRTIASWYLWRV 204
>gi|448666519|ref|ZP_21685164.1| DNA-3-methyladenine glycosylase [Haloarcula amylolytica JCM 13557]
gi|445771650|gb|EMA22706.1| DNA-3-methyladenine glycosylase [Haloarcula amylolytica JCM 13557]
Length = 203
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 60/186 (32%), Positives = 101/186 (54%), Gaps = 6/186 (3%)
Query: 80 DPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNILPD 139
DP + L++ H T + S F L SIL QQ++ +A + R LF+ + P+
Sbjct: 12 DPDIGPLVETHGELTLDPSSDLFERLVVSILRQQVSMASAAATRER---LFDAV-TVTPE 67
Query: 140 AVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIGA 199
+ LR+ G+S +K Y+ ++A+ + + S E+ + D + + LT++ G+G
Sbjct: 68 GIRDADNDLLRDAGLSRQKTRYVNEVADAFLEHGYSLETFEDAADEEIHEELTAITGVGD 127
Query: 200 WSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSWY 259
W+ +M ++F+ + DV PVGDLG+RKG + + G + +M E E+W PYRS S Y
Sbjct: 128 WTANMQLLFAFGREDVFPVGDLGIRKGFEAVVG--DGYSRAEMREYAERWSPYRSYASLY 185
Query: 260 MWRLME 265
+WR E
Sbjct: 186 LWRASE 191
>gi|317484700|ref|ZP_07943601.1| HhH-GPD superfamily base excision DNA repair protein [Bilophila
wadsworthia 3_1_6]
gi|316924056|gb|EFV45241.1| HhH-GPD superfamily base excision DNA repair protein [Bilophila
wadsworthia 3_1_6]
Length = 403
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 63/190 (33%), Positives = 102/190 (53%), Gaps = 4/190 (2%)
Query: 72 ALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFN 131
AL L+ +D L +I+ P F +L S++ QQ++ +AA++I R L
Sbjct: 202 ALDALKRRDKRLGRVIERLGPIRRGVEPDLFTALVDSVIAQQISGRAAQTISDRLHVLVG 261
Query: 132 GEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKML 191
N P + P Q+++ G+S RK Y++ +A + G L E++ D + + L
Sbjct: 262 ---NFTPQGLAEADPSQIQQCGLSQRKVGYIQGIAREVASGALDLEALRHAPDEELIRKL 318
Query: 192 TSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKP 251
+++ GIG W+ M MIFSL +PDVL GDLG+R+G+ +LYG + E +++ P
Sbjct: 319 SALNGIGVWTAEMLMIFSLCRPDVLSWGDLGIRRGMALLYG-DRELTRERFERRRKRYSP 377
Query: 252 YRSVGSWYMW 261
Y SV S Y+W
Sbjct: 378 YGSVVSLYLW 387
Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 80/199 (40%), Gaps = 21/199 (10%)
Query: 72 ALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFN 131
A LR DP+LA +A FE F +LAK I+ ++ A A + A
Sbjct: 8 AFARLRSVDPVLA---EAAGDAAFELETDLFAALAKGIM-EKGASDAFPFAWASLAAQI- 62
Query: 132 GEDNILPDAVLAVSPQQLREIGVSY-----RKASYLRDLAEKYTDGILSDESIVEMDDVT 186
GE VSP+++ E G + + A+ L A+ G + E + + D
Sbjct: 63 GE----------VSPERVLEAGSALEAFGKKTANALLGAAKAVRSGKIGMERLAALPDDE 112
Query: 187 MFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVC 246
L S++ + +I L +PDVL D VR GL ++G + E
Sbjct: 113 AVGALCSLRCVDVRLAVRVLIGVLRRPDVLRFDDEAVRSGLMRVHGPRSCTQE-GFEAFR 171
Query: 247 EKWKPYRSVGSWYMWRLME 265
+ P+ S + +W +E
Sbjct: 172 ARHAPFGSAATLCLWESVE 190
>gi|209695169|ref|YP_002263098.1| DNA repair protein [Aliivibrio salmonicida LFI1238]
gi|208009121|emb|CAQ79358.1| DNA repair protein [Aliivibrio salmonicida LFI1238]
Length = 202
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 62/171 (36%), Positives = 95/171 (55%), Gaps = 10/171 (5%)
Query: 92 PPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNILPDAVLAVSPQQLRE 151
P FE+ FLS+ I+ QQL+ K A I R VAL + P+ +L++ Q LR+
Sbjct: 36 PHGFEA----FLSI---IVSQQLSTKVAAVIMGRLVALLK---EVTPERLLSIEEQNLRD 85
Query: 152 IGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLH 211
+G+S+RK Y + LA G L + + + D +TS+KG G WS ++++FSL
Sbjct: 86 VGLSWRKIEYAKGLALAVQSGNLDIDGLESLSDEDAISAITSLKGFGRWSAEIYLMFSLG 145
Query: 212 KPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSWYMWR 262
+ D+ P DLGV L L GL + P + E+ W+P+RSVGS ++W+
Sbjct: 146 RQDIFPADDLGVLIALGRLKGLTDKPTPKQAREMVGHWQPWRSVGSLFLWQ 196
>gi|223986618|ref|ZP_03636612.1| hypothetical protein HOLDEFILI_03934 [Holdemania filiformis DSM
12042]
gi|223961413|gb|EEF65931.1| hypothetical protein HOLDEFILI_03934 [Holdemania filiformis DSM
12042]
Length = 234
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 109/201 (54%), Gaps = 6/201 (2%)
Query: 61 KPLTFKGEVDIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAK 120
+P+ GE +I ++L+ +DP L +ID P F ++ I+ QQ++ KA +
Sbjct: 6 EPIFRYGETEI--QYLKQRDPKLGAIIDQIGPIERTVDDDLFSAIVHHIVGQQISTKAQQ 63
Query: 121 SIYTRFVALFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIV 180
+I+ R GE N + +LA ++L+ G++++K Y+ D A K G L E +
Sbjct: 64 TIWRRMREDL-GEIN--AETILAAGTERLQGFGMTFKKVEYIEDCARKAASGELDLEQLP 120
Query: 181 EMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGAL 240
+ D + L S+KGIG W+ M ++F L +PDV GDL + +GL+++Y +++ L
Sbjct: 121 QCSDKEIIDQLVSLKGIGVWTAEMILLFCLQRPDVFSYGDLAILRGLRMVYHHRKIDRKL 180
Query: 241 KMEEVCEKWKPYRSVGSWYMW 261
E+ ++ PY SV S Y+W
Sbjct: 181 -FEKYRRRFSPYGSVASLYLW 200
>gi|390602613|gb|EIN12006.1| DNA glycosylase [Punctularia strigosozonata HHB-11173 SS5]
Length = 458
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 60/143 (41%), Positives = 92/143 (64%), Gaps = 17/143 (11%)
Query: 101 PFLSLAKSILYQQLAYKAAKSIYTRFVALF---------NGEDNIL-----PDA--VLAV 144
PF +L +SIL QQ+++KAA+SI +F+ LF +G +++ P A V +
Sbjct: 135 PFRTLTQSILGQQISWKAARSITYKFIRLFHMSLPEARPDGPESVFQQFPFPTAHQVATI 194
Query: 145 SPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIGAWSVHM 204
LR G+S RKA Y++DLA+++ DG LS + ++E DD + +ML V+GIG + M
Sbjct: 195 DIPALRSAGLSGRKAEYVQDLAQRFADGRLSTKKLLEADDEELARMLLEVRGIGRV-LDM 253
Query: 205 FMIFSLHKPDVLPVGDLGVRKGL 227
F +FSL +PD+LPVGDLGV++G+
Sbjct: 254 FAMFSLRRPDILPVGDLGVQRGM 276
Score = 46.2 bits (108), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 34/58 (58%), Gaps = 5/58 (8%)
Query: 212 KPDVLPVGDLGVRKGLQVLYGLKELPGAL----KMEEVCEKWKPYRSVGSWYMWRLME 265
KP LP G L V L G K++ GA +ME++ E WKPYRS+G +YMW L E
Sbjct: 397 KPAPLPEG-LSVAVLKSRLDGKKKVKGAFLTPKEMEDLTESWKPYRSLGVYYMWALAE 453
>gi|410940722|ref|ZP_11372523.1| base excision DNA repair protein, HhH-GPD family [Leptospira
noguchii str. 2006001870]
gi|410784048|gb|EKR73038.1| base excision DNA repair protein, HhH-GPD family [Leptospira
noguchii str. 2006001870]
Length = 228
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 105/186 (56%), Gaps = 1/186 (0%)
Query: 76 LRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDN 135
LR KDP+ LID+ ++ +P+ L KS+L QQL+ K A + R ++L +
Sbjct: 34 LRKKDPITKKLIDSIGLCKLKTIGTPYQVLIKSVLGQQLSVKVALTFERRLISLAGSKKI 93
Query: 136 ILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVK 195
P+ +L + ++R+IG+S K ++ +AE Y ++D + +++D + +L S+K
Sbjct: 94 PSPEQILKIPNDKMRKIGISQAKTETIKRIAEAYLKRSITDSKLRKLEDFDVLNLLCSIK 153
Query: 196 GIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSV 255
G+G W+ M +IF+L + D + DL +RK ++ YG+ + +++ + PYR++
Sbjct: 154 GVGPWTAEMTLIFALDRWDHFSINDLILRKSVEKHYGISK-DNKKEIQLFLNTYSPYRTI 212
Query: 256 GSWYMW 261
SWY+W
Sbjct: 213 LSWYLW 218
>gi|334140287|ref|YP_004533489.1| DNA-3-methyladenine glycosylase II [Novosphingobium sp. PP1Y]
gi|333938313|emb|CCA91671.1| DNA-3-methyladenine glycosylase II [Novosphingobium sp. PP1Y]
Length = 205
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 61/193 (31%), Positives = 99/193 (51%), Gaps = 3/193 (1%)
Query: 69 VDIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVA 128
+ + L L ++P A +D P + + +L ++I+ QQ++ AA S+++R A
Sbjct: 8 IKLGLDALAAREPGFARALDLAGYPEPRIRQRGYATLLRTIVGQQVSVAAAASVWSRLEA 67
Query: 129 LFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMF 188
L + PDA+L LR G+S +K Y R L E G L E++ E DD
Sbjct: 68 LLG--QGLPPDALLEADFDALRGCGLSRQKQGYARSLCELVVAGALDLENLPE-DDEAAI 124
Query: 189 KMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEK 248
L +KGIG WS ++++F+ +PD+ P GDL V+ GL + GL P + E+ E
Sbjct: 125 ADLVRIKGIGRWSAEIYLLFAEGRPDIWPAGDLAVQSGLHRILGLDARPSEKETRELAEN 184
Query: 249 WKPYRSVGSWYMW 261
W+P+R + + W
Sbjct: 185 WRPHRGSAAIFTW 197
>gi|422665673|ref|ZP_16725544.1| DNA-3-methyladenine glycosylase II, partial [Pseudomonas syringae
pv. aptata str. DSM 50252]
gi|330976090|gb|EGH76156.1| DNA-3-methyladenine glycosylase II [Pseudomonas syringae pv. aptata
str. DSM 50252]
Length = 221
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 66/203 (32%), Positives = 110/203 (54%), Gaps = 14/203 (6%)
Query: 72 ALRHLRDKDPLLATLIDAHRPPTFE---SSRSPFLSLAKSILYQQLAYKAAKSIYTRFVA 128
A+ LR D +LID H P +++ PF +L K++ YQQL +A ++ R A
Sbjct: 10 AVAALRSIDVQWQSLID-HVGPCLHPVSAAQDPFQALVKAVAYQQLHARAGDAMVRRLRA 68
Query: 129 LFNGEDNILPD-------AVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESI-V 180
LF D+ LP+ A++ + Q LR G S K ++ +AE DG++ + S +
Sbjct: 69 LFL--DDSLPEVSFPGAQALVDLDDQALRSCGFSASKCRAIKAIAEARLDGLVPEVSAAL 126
Query: 181 EMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGAL 240
M + + + L + G G W+V M +I+ L + DV+P D GV +G + LY L+ P
Sbjct: 127 AMGNEALVERLIQLPGGGRWTVEMMLIYGLGQLDVMPASDFGVCEGYRRLYALQLKPSHR 186
Query: 241 KMEEVCEKWKPYRSVGSWYMWRL 263
+M + E++ PYR++ +WY+WR+
Sbjct: 187 QMARLAERFAPYRTIAAWYLWRV 209
>gi|399067200|ref|ZP_10748817.1| HhH-GPD superfamily base excision DNA repair protein
[Novosphingobium sp. AP12]
gi|398027212|gb|EJL20771.1| HhH-GPD superfamily base excision DNA repair protein
[Novosphingobium sp. AP12]
Length = 205
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 56/158 (35%), Positives = 87/158 (55%), Gaps = 3/158 (1%)
Query: 104 SLAKSILYQQLAYKAAKSIYTRFVALFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLR 163
+L ++I+ QQ++ AA S++ R AL +N+LP+ +LA LR G+S +K Y R
Sbjct: 43 TLLRTIVGQQVSVAAAASVWNRLEALLG--ENLLPETLLAAEFDALRACGLSRQKQGYAR 100
Query: 164 DLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGV 223
L E G L D + DD L +KGIG WS ++++F+ +PD+ P GDL V
Sbjct: 101 SLCELVLAGNL-DLDNLPADDEEAIAQLVQIKGIGRWSAEIYLLFAEGRPDIWPAGDLAV 159
Query: 224 RKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSWYMW 261
+ GL L GL+ P + E+ E W+P+R + + W
Sbjct: 160 QAGLHKLLGLEARPSEKRTRELAEAWRPHRGAAAIFTW 197
>gi|440746381|ref|ZP_20925665.1| DNA-3-methyladenine glycosylase II [Pseudomonas syringae BRIP39023]
gi|440371181|gb|ELQ08031.1| DNA-3-methyladenine glycosylase II [Pseudomonas syringae BRIP39023]
Length = 221
Score = 110 bits (276), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 62/195 (31%), Positives = 106/195 (54%), Gaps = 3/195 (1%)
Query: 72 ALRHLRDKDPLLATLIDAHRPPT--FESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVAL 129
A+ LR DP +LID P +++ PF +L K++ YQQL +A ++ R AL
Sbjct: 15 AVAALRSIDPQWQSLIDQVGPCLHPVSAAQDPFQALVKAVAYQQLHARAGDAMVMRLRAL 74
Query: 130 FNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESI-VEMDDVTMF 188
F + A++ + Q LR G S K ++ +A DG++ + S + M + +
Sbjct: 75 FVDDSFPGAQALVELDDQALRSCGFSASKCRAIKAIAAARVDGLVPEVSAALAMGNEALV 134
Query: 189 KMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEK 248
+ L + G+G W+V M +I+ L + DV+P D GV +G + LY L+ P +M + E+
Sbjct: 135 ERLIQLPGVGRWTVEMMLIYGLGQLDVMPASDFGVCEGYRRLYALELKPSHRQMARLAER 194
Query: 249 WKPYRSVGSWYMWRL 263
+ PYR++ +WY+WR+
Sbjct: 195 FAPYRTIAAWYLWRV 209
>gi|298157816|gb|EFH98895.1| DNA-3-methyladenine glycosylase II [Pseudomonas savastanoi pv.
savastanoi NCPPB 3335]
Length = 221
Score = 110 bits (276), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 62/195 (31%), Positives = 106/195 (54%), Gaps = 3/195 (1%)
Query: 72 ALRHLRDKDPLLATLIDAHRPPT--FESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVAL 129
A+ LR DP +LID P +++ PF +L K++ YQQL +A ++ R AL
Sbjct: 15 AVAALRSIDPQWQSLIDQVGPCLHPVSAAQDPFQALVKAVAYQQLHARAGDAMVMRLRAL 74
Query: 130 FNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESI-VEMDDVTMF 188
F + A++ + Q LR G S K ++ +A DG++ + S + M + +
Sbjct: 75 FVDDSFPGAQALVELDDQALRSCGFSASKCRAIKAIAAARVDGLVPEVSAALAMGNEALV 134
Query: 189 KMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEK 248
+ L + G+G W+V M +I+ L + DV+P D GV +G + LY L+ P +M + E+
Sbjct: 135 ERLIQLPGVGRWTVEMMLIYGLGQLDVMPASDFGVCEGYRRLYALELKPSHRQMARLAER 194
Query: 249 WKPYRSVGSWYMWRL 263
+ PYR++ +WY+WR+
Sbjct: 195 FAPYRTIAAWYLWRV 209
>gi|257790302|ref|YP_003180908.1| HhH-GPD family protein [Eggerthella lenta DSM 2243]
gi|325830445|ref|ZP_08163902.1| base excision DNA repair protein, HhH-GPD family [Eggerthella sp.
HGA1]
gi|257474199|gb|ACV54519.1| HhH-GPD family protein [Eggerthella lenta DSM 2243]
gi|325487912|gb|EGC90350.1| base excision DNA repair protein, HhH-GPD family [Eggerthella sp.
HGA1]
Length = 219
Score = 110 bits (276), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 117/220 (53%), Gaps = 12/220 (5%)
Query: 54 DNSPKIFKPLTFKGEVDIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQ 113
+ P+ F+ GE ++A +L +DP L + E F +L I+ QQ
Sbjct: 2 EREPRYFE----YGEAEVA--YLAARDPRLGEAMAVIGRIEREVHPDLFAALVNCIVGQQ 55
Query: 114 LAYKAAKSIYTRFVALFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGI 173
+A KA +I+ R + F + P+A+ A S +L+++G+S+RK Y++ A + G
Sbjct: 56 IATKAQTTIWNRMLERFG---EVTPEAMAACSDDELQQVGISFRKVGYIKGAAARVLSGE 112
Query: 174 LSDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGL 233
+ E + E+ D + + L+++ GIG W+ M M FS+ +P++L GDL + +GL++++
Sbjct: 113 VDLEGLAELSDDEVCRTLSALPGIGVWTAEMLMTFSMQRPNILSWGDLAIHRGLRMVHHH 172
Query: 234 KELPGALKMEEVCEKWKPYRSVGSWYMWRLMEAKGVLPNV 273
+ + L + ++ PY SV S Y+W + A G +P +
Sbjct: 173 RRITPEL-FAKYRRRYTPYGSVASLYLWEV--AGGAIPGM 209
>gi|424072939|ref|ZP_17810359.1| DNA-3-methyladenine glycosylase II [Pseudomonas syringae pv.
avellanae str. ISPaVe037]
gi|407996970|gb|EKG37423.1| DNA-3-methyladenine glycosylase II [Pseudomonas syringae pv.
avellanae str. ISPaVe037]
Length = 221
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 59/170 (34%), Positives = 96/170 (56%), Gaps = 5/170 (2%)
Query: 97 SSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNILP--DAVLAVSPQQLREIGV 154
S++ PF +L K++ YQQL KA +I R ALF D P A++ + Q LR G
Sbjct: 42 SAQDPFQALIKAVAYQQLHAKAGDAIVMRLRALF--PDTAFPAAQALIDLDEQTLRSCGF 99
Query: 155 SYRKASYLRDLAEKYTDGILSDES-IVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKP 213
S K ++ +A ++G++ D S + M + + L + G+G W+V M +I+ L +
Sbjct: 100 SASKCRAIKAIAVARSNGLVPDISDALAMSNEELVARLVQLPGVGRWTVEMMLIYGLGQM 159
Query: 214 DVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSWYMWRL 263
DV+P D GV +G + LY L+ PG +M E++ P+R+V +WY+WR+
Sbjct: 160 DVMPASDYGVCEGYRRLYALELKPGHKEMAARAERFAPFRTVAAWYLWRV 209
>gi|226310513|ref|YP_002770407.1| DNA-3-methyladenine glycosylase II [Brevibacillus brevis NBRC
100599]
gi|226093461|dbj|BAH41903.1| putative DNA-3-methyladenine glycosylase II [Brevibacillus brevis
NBRC 100599]
Length = 309
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 112/222 (50%), Gaps = 27/222 (12%)
Query: 59 IFKPLTFKGEVDIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKA 118
I++ + +GE+ I R P+L DA F + K+I+ QQ+
Sbjct: 97 IYEQMREEGELAILTERFRGLRPML----DA----------DLFQCMVKTIIGQQINLTF 142
Query: 119 AKSIYTRFVALF-------NGEDNI---LPDAVLAVSPQQLREIGVSYRKASYLRDLAEK 168
A ++ R V L NGE I PD+V ++ + LR + S RKA Y+ D A
Sbjct: 143 AANLTERLVTLAGDPVENQNGEGIIAFPTPDSVARLTVEDLRSLQFSQRKAEYIIDFARA 202
Query: 169 YTDGILSDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQ 228
+ + E + M+D + LTS++GIG W+V ++F + +PD+LP D+G+R G+
Sbjct: 203 IVNETVDLERLWTMEDEEIITYLTSLRGIGRWTVECLLMFGMGRPDLLPAADIGLRNGIV 262
Query: 229 VLYGLKELPGALKMEEVCEKWKPYRSVGSWYMWRLMEAKGVL 270
LYG++ P + ++ EKW P+RS+ Y+W EA G +
Sbjct: 263 HLYGMETKPNENDIRKLGEKWAPWRSIYCLYVW---EAVGAI 301
>gi|424776947|ref|ZP_18203922.1| DNA-3-methyladenine glycosylase [Alcaligenes sp. HPC1271]
gi|422887987|gb|EKU30381.1| DNA-3-methyladenine glycosylase [Alcaligenes sp. HPC1271]
Length = 223
Score = 110 bits (275), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 105/201 (52%), Gaps = 4/201 (1%)
Query: 70 DIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVAL 129
D A L +D +L LI H + F +L +SI+ QQLA + A ++ + L
Sbjct: 24 DDACAQLMKRDRILRKLIPQHGDYWLQHQAPAFTTLVRSIVGQQLASRTADQLWRK---L 80
Query: 130 FNGEDNIL-PDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMF 188
+G L P+ +L + + L +G+ RKA Y+ DLA + + ++ + D +
Sbjct: 81 LDGCGQPLSPELILELGYEALHGLGLPKRKAEYIVDLATHFDARKIDPQAWQSLSDEAVI 140
Query: 189 KMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEK 248
L +++G+G W+ MF+IF+LH+PDVLP+ D G+ K + + Y E + EV +
Sbjct: 141 ADLCAIRGVGRWTADMFLIFNLHRPDVLPLDDAGLLKAISLHYFSGEPVSRFEAREVAQA 200
Query: 249 WKPYRSVGSWYMWRLMEAKGV 269
W P+ +V +W++WR + V
Sbjct: 201 WAPWCTVATWHLWRSLNTVAV 221
>gi|15807566|ref|NP_296303.1| DNA-3-methyladenine glycosidase II [Deinococcus radiodurans R1]
gi|329665899|pdb|2YG9|A Chain A, Structure Of An Unusual 3-Methyladenine Dna Glycosylase Ii
( Alka) From Deinococcus Radiodurans
gi|329665900|pdb|2YG9|B Chain B, Structure Of An Unusual 3-Methyladenine Dna Glycosylase Ii
( Alka) From Deinococcus Radiodurans
gi|6460411|gb|AAF12123.1|AE002087_6 DNA-3-methyladenine glycosidase II, putative [Deinococcus
radiodurans R1]
Length = 225
Score = 110 bits (275), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 70/206 (33%), Positives = 106/206 (51%), Gaps = 14/206 (6%)
Query: 57 PKIFKPLTFKGEVDIALRHLRDKDPLLATLID-AHRPPTFESSRSPFLSLAKSILYQQLA 115
P + PLT A+ HL +DP+LA + P + PF L +S+ QQL+
Sbjct: 20 PAVLPPLTDHAG---AVAHL-SRDPVLAQVTSLCGELPVLAPTPDPFGRLVRSVAGQQLS 75
Query: 116 YKAAKSIYTRFVALFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILS 175
KAA++IY R L G ++P A+L VS LR +G+S+ K ++ A G +
Sbjct: 76 VKAAQAIYGRLEGLPGG---VVPAALLKVSGDDLRGVGLSWAKVRTVQAAAAAAVSGQID 132
Query: 176 DESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKE 235
+ D + L + GIG W+ MF++F+L +PDV GDL +R+G++ LY
Sbjct: 133 FAHLSGQPDELVIAELVQLPGIGRWTAEMFLLFALARPDVFSSGDLALRQGVERLY---- 188
Query: 236 LPGALKMEEVCEKWKPYRSVGSWYMW 261
PG +V +W PYRS+ S Y+W
Sbjct: 189 -PGE-DWRDVTARWAPYRSLASRYLW 212
>gi|330839590|ref|YP_004414170.1| HhH-GPD family protein [Selenomonas sputigena ATCC 35185]
gi|329747354|gb|AEC00711.1| HhH-GPD family protein [Selenomonas sputigena ATCC 35185]
Length = 212
Score = 110 bits (275), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 64/195 (32%), Positives = 108/195 (55%), Gaps = 6/195 (3%)
Query: 67 GEVDIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRF 126
GE +IA +L+ KD LA +I++ F ++ I+ QQ++ KA ++I+ R
Sbjct: 6 GEKEIA--YLKSKDKKLAAVIESLGVLERPVHDDVFSAVVHHIIGQQISTKAQEAIWARL 63
Query: 127 VALFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVT 186
D +L++ ++L+ +G S+RK Y+ D AEK + ++ M D
Sbjct: 64 CEKVGTVD---ATHLLSLGREELQAVGTSFRKVDYIMDFAEKVASRDFNIAALYAMSDDE 120
Query: 187 MFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVC 246
+ L+S+KGIG W+ M +IF+L +PDVL GDLG+++GL++LY KE+ + E
Sbjct: 121 VICTLSSLKGIGDWTAEMLLIFTLRRPDVLSFGDLGIQRGLRMLYRHKEIA-RRRFERYK 179
Query: 247 EKWKPYRSVGSWYMW 261
+++ PY S S Y+W
Sbjct: 180 KRYSPYASTASLYLW 194
>gi|294084258|ref|YP_003551016.1| hypothetical protein [Candidatus Puniceispirillum marinum IMCC1322]
gi|292663831|gb|ADE38932.1| HhH-GPD [Candidatus Puniceispirillum marinum IMCC1322]
Length = 219
Score = 110 bits (275), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 63/192 (32%), Positives = 103/192 (53%), Gaps = 4/192 (2%)
Query: 72 ALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFN 131
A+ L D +A +I + PP S + F +LA++I+ QQ++ AA SI+ R A N
Sbjct: 19 AIDQLSAIDADVADVIKQYGPPPDRSLPANFDTLARAIVGQQISRAAATSIWNRMEA--N 76
Query: 132 GEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKML 191
G + D + SP L E+G+S RKA Y+ +A++ + + +D + L
Sbjct: 77 GVSEV--DVIATKSPDDLAELGLSRRKAEYIIGIADEIVSKRIDLHELATLDGQAVQDRL 134
Query: 192 TSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKP 251
++GIGAW+ F +F+L D PV D+ +++G++ L L P A +ME + E W+P
Sbjct: 135 VQIRGIGAWTADNFRLFALGDMDAWPVNDIALQEGMKRLKKLSHRPKAPEMETLGEAWRP 194
Query: 252 YRSVGSWYMWRL 263
YR G+ +W L
Sbjct: 195 YRGAGALVLWHL 206
>gi|189196784|ref|XP_001934730.1| DNA-3-methyladenine glycosylase [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187980609|gb|EDU47235.1| DNA-3-methyladenine glycosylase [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 439
Score = 110 bits (274), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 63/166 (37%), Positives = 88/166 (53%), Gaps = 13/166 (7%)
Query: 113 QLAYKAAKSIYTRFVALFNGEDNILPD--AVLAVSPQQLREIGVSYRKASYLRDLAEKYT 170
Q++ +AA SI +F ALF P VL + LR G+S RKA Y+ LAEK+
Sbjct: 265 QVSGQAASSIRAKFTALFPTTHPAFPTPTQVLQLPIPTLRTAGLSQRKAEYITGLAEKFC 324
Query: 171 DGILSDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVL 230
G L+ + +V D + + L +V+G+G WSV MF F L + DV GDLGV++G+ V
Sbjct: 325 SGELTAQMLVSASDEELIEKLVAVRGLGRWSVEMFACFGLKRMDVFSTGDLGVQRGMAVY 384
Query: 231 YG-----LKELPGALK------MEEVCEKWKPYRSVGSWYMWRLME 265
G LK G K M + + PYRS+ WYMWR+ +
Sbjct: 385 AGRDVNKLKSKGGKWKYMTEREMLDTAANFSPYRSLFMWYMWRIAD 430
>gi|346322738|gb|EGX92336.1| DNA-3-methyladenine glycosylase, putative [Cordyceps militaris
CM01]
Length = 357
Score = 110 bits (274), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 76/215 (35%), Positives = 107/215 (49%), Gaps = 21/215 (9%)
Query: 72 ALRHLRDKDPLLATLIDAH-----RPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRF 126
A HL D + LI H P PF SL+ I+ QQ++ AAKSI +F
Sbjct: 135 ACDHLISVDERMRPLIAKHTCRAFSPEGLAEKVDPFESLSSGIISQQVSGAAAKSIKNKF 194
Query: 127 VALFNGEDNIL-----PDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVE 181
VALF + P V A LR G+S RKA Y++ LA ++ G LS + + +
Sbjct: 195 VALFAADSAAAARFPHPSQVAATPLDTLRTAGLSQRKAEYIQGLAGRFASGELSAQMLRD 254
Query: 182 MDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYG-----LKEL 236
+ LT+V+G+G WSV MF F L + DV +GDLGV++G+ G L+
Sbjct: 255 APYDEVLARLTAVRGLGRWSVEMFACFGLKRMDVFALGDLGVQRGMAAFEGRDVAKLRTK 314
Query: 237 PGALK------MEEVCEKWKPYRSVGSWYMWRLME 265
G K M + +++ PYRS+ WYMWR+ E
Sbjct: 315 GGKWKYMSEQDMVALSDRFAPYRSLFMWYMWRVEE 349
>gi|260886577|ref|ZP_05897840.1| putative DNA-3-methyladenine glycosidase II [Selenomonas sputigena
ATCC 35185]
gi|260863720|gb|EEX78220.1| putative DNA-3-methyladenine glycosidase II [Selenomonas sputigena
ATCC 35185]
Length = 213
Score = 110 bits (274), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 64/195 (32%), Positives = 108/195 (55%), Gaps = 6/195 (3%)
Query: 67 GEVDIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRF 126
GE +IA +L+ KD LA +I++ F ++ I+ QQ++ KA ++I+ R
Sbjct: 7 GEKEIA--YLKSKDKKLAAVIESLGVLERPVHDDVFSAVVHHIIGQQISTKAQEAIWARL 64
Query: 127 VALFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVT 186
D +L++ ++L+ +G S+RK Y+ D AEK + ++ M D
Sbjct: 65 CEKVGTVD---ATHLLSLGREELQAVGTSFRKVDYIMDFAEKVASRDFNIAALYAMSDDE 121
Query: 187 MFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVC 246
+ L+S+KGIG W+ M +IF+L +PDVL GDLG+++GL++LY KE+ + E
Sbjct: 122 VICTLSSLKGIGDWTAEMLLIFTLRRPDVLSFGDLGIQRGLRMLYRHKEIA-RRRFERYK 180
Query: 247 EKWKPYRSVGSWYMW 261
+++ PY S S Y+W
Sbjct: 181 KRYSPYASTASLYLW 195
>gi|421100623|ref|ZP_15561246.1| base excision DNA repair protein, HhH-GPD family [Leptospira
borgpetersenii str. 200901122]
gi|410796426|gb|EKR98562.1| base excision DNA repair protein, HhH-GPD family [Leptospira
borgpetersenii str. 200901122]
Length = 228
Score = 110 bits (274), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 106/191 (55%), Gaps = 1/191 (0%)
Query: 76 LRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDN 135
LR KD LID+ P ++ +P+ L KS+L QQL+ K A + R ++L +
Sbjct: 34 LRKKDSTTKKLIDSIGPCKLQTIGNPYQVLIKSVLGQQLSVKVALTFERRLISLAGSKKI 93
Query: 136 ILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVK 195
P+ +L + +L++IGVS K ++ +AE Y + ++D + +++D + +L S K
Sbjct: 94 PSPNQILMIPNGKLKKIGVSQAKTETIKRIAEAYLNRDITDSKLRKLEDSDVLNLLCSFK 153
Query: 196 GIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSV 255
G+G W+ M +IF+L + D + DL +RK ++ YG+ + +++ + P+R++
Sbjct: 154 GVGPWTAEMVLIFALDRWDHFSINDLILRKSVEKHYGISK-DNKKEIQHFLMSYSPFRTI 212
Query: 256 GSWYMWRLMEA 266
SWY+W M+
Sbjct: 213 LSWYLWTDMDG 223
>gi|410460244|ref|ZP_11313927.1| HhH-GPD family protein [Bacillus azotoformans LMG 9581]
gi|409927474|gb|EKN64610.1| HhH-GPD family protein [Bacillus azotoformans LMG 9581]
Length = 289
Score = 110 bits (274), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 125/271 (46%), Gaps = 13/271 (4%)
Query: 6 HTSDNISQNPSASSKITFPPRKIRKLTTITPITKIAEI--PVATAISTNSDNSPKIFKPL 63
H D ++Q I P K I +T + + PV NS K +
Sbjct: 21 HAIDPLNQVDLQKRLIKVPILIEEKNQYIVEVTGLGTVNKPVFKLTGNNSKQKEAQIKRI 80
Query: 64 TFKGEVDIAL----RHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAA 119
+ + + +L RH + D L L H PF L K I++QQL +
Sbjct: 81 SEIFQWNTSLKQVNRHFQQTD--LRDLFQEHFGTPLVLDFDPFSCLVKCIIHQQLNLSFS 138
Query: 120 KSIYTRFVALFNGE-DNIL----PDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGIL 174
++ RFV F E D + P+ V ++ +QLR++ S RK Y+ + + L
Sbjct: 139 HTLTERFVKTFGNEIDGVWFYPNPEIVANITVEQLRDMQFSSRKGEYVIGIGIAVAERDL 198
Query: 175 SDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLK 234
E++ + +F L ++GIGAW++ F++F+L +P++ P D+G++ L+ LY L
Sbjct: 199 EFEALARKSEEEIFNELIKIRGIGAWTIQNFLLFALGRPNLFPATDIGIQNALKKLYRLD 258
Query: 235 ELPGALKMEEVCEKWKPYRSVGSWYMWRLME 265
P ++E+ +W+PY S + Y+WR +E
Sbjct: 259 RKPTLEEIEQYKHRWEPYLSYAALYLWRSIE 289
>gi|392570358|gb|EIW63531.1| DNA glycosylase [Trametes versicolor FP-101664 SS1]
Length = 457
Score = 110 bits (274), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 86/245 (35%), Positives = 125/245 (51%), Gaps = 29/245 (11%)
Query: 63 LTFKGEVDIALRHLRDKDPLLATLIDAHRPPTFESSR--SPFLSLAKSILYQQLAYKAAK 120
LTF E A RHL DP + + FE PF +LA SIL QQ+++KAA
Sbjct: 97 LTFSFEE--ARRHLVRVDPRFEDVFRRVKCRPFEHLERVDPFRTLAHSILGQQISWKAAA 154
Query: 121 SIYTRFVALFN---------GEDNILPDA--VLAVSPQQLREIGVSYRKASYLRDLAEKY 169
SI +FV LF+ + N P A V+ LR G+S RKA Y+ DLA ++
Sbjct: 155 SITHKFVRLFDPSLPESIADSKSNFFPSAHQVITKDIATLRSAGLSGRKAEYVLDLAGRF 214
Query: 170 TDGILSDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVG-----DLGVR 224
DG LS ++ DD ++KML V+GIG + MF +FSL +PD+LPVG DLGV+
Sbjct: 215 ADGRLSTRKLLLADDEELYKMLIEVRGIGR-VIDMFAMFSLRRPDILPVGKSSRWDLGVQ 273
Query: 225 KGL----QVLYGLKELPGALKMEEVCEKWKPYRSVGSWYMWRLMEAKG----VLPNVAKA 276
KG+ L+ P +L+ +++ ++ + +V M M A+G +P A
Sbjct: 274 KGMLRWFVSLHSPSTHPVSLRKDKLSKEDETQAAVAGNSMGLPMGAEGEGAATMPRAATP 333
Query: 277 AVTSV 281
+S+
Sbjct: 334 DASSI 338
Score = 42.0 bits (97), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 26/36 (72%), Gaps = 4/36 (11%)
Query: 234 KELPGAL----KMEEVCEKWKPYRSVGSWYMWRLME 265
K++ GAL +ME++ E W+PYRS+G +YMW L E
Sbjct: 419 KKVKGALLTPKEMEDLAECWQPYRSLGVYYMWALAE 454
>gi|418744686|ref|ZP_13301035.1| base excision DNA repair protein, HhH-GPD family [Leptospira
santarosai str. CBC379]
gi|418754116|ref|ZP_13310350.1| base excision DNA repair protein, HhH-GPD family [Leptospira
santarosai str. MOR084]
gi|409965538|gb|EKO33401.1| base excision DNA repair protein, HhH-GPD family [Leptospira
santarosai str. MOR084]
gi|410794352|gb|EKR92258.1| base excision DNA repair protein, HhH-GPD family [Leptospira
santarosai str. CBC379]
Length = 226
Score = 110 bits (274), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 107/196 (54%), Gaps = 5/196 (2%)
Query: 70 DIALRH----LRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTR 125
DI LR LR KD + LID+ P + +P+ L KS+L QQL+ K A + R
Sbjct: 22 DIRLRKASDWLRKKDSITKKLIDSVGPCKLRTIGTPYQVLIKSVLGQQLSVKVALTFERR 81
Query: 126 FVALFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDV 185
++L P+ +L + +L++IGVS K ++ +AE Y+ ++D + +++D
Sbjct: 82 LISLAGSRKIPPPNRILTIPNGELKKIGVSQAKTETIKRIAEAYSIRNITDSKLRKLEDS 141
Query: 186 TMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEV 245
+ +L S KG+G W+ M +IF+L + D + DL +RK ++ YG+ + +++
Sbjct: 142 DVLNLLCSFKGVGPWTAEMVLIFALDRWDHFSINDLILRKSVEKHYGISK-DNKKEIQRF 200
Query: 246 CEKWKPYRSVGSWYMW 261
+ P+R++ SWY+W
Sbjct: 201 LTGYSPFRTILSWYLW 216
>gi|347535508|ref|YP_004842933.1| putative DNA-3-methyladenine glycosylase [Flavobacterium
branchiophilum FL-15]
gi|345528666|emb|CCB68696.1| Probable DNA-3-methyladenine glycosylase [Flavobacterium
branchiophilum FL-15]
Length = 203
Score = 110 bits (274), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 106/194 (54%), Gaps = 6/194 (3%)
Query: 69 VDIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVA 128
++ A+ +L++KD + +I + P F +L IL QQ++ AK+ F+
Sbjct: 1 METAIEYLKNKDGIFEKIIHLYGVPKIPYRPEGFETLVLLILEQQVSVDVAKA---TFLK 57
Query: 129 LFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMF 188
L NG ++ILP+ ++ +S R GVS +KA Y+ LAE + + + + +D T+
Sbjct: 58 LKNGVNHILPEVLIPLSEADFRLYGVSRQKAKYIHCLAEAVLNKQIHLDQLSSKNDETIR 117
Query: 189 KMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEK 248
L +KGIG W++ ++++F L PD+LP+GD+ V ++ L G L +M E
Sbjct: 118 NELIKIKGIGHWTIDIYLMFCLKSPDILPLGDIAVSHTIKELTG---LTTQTEMAAYTEN 174
Query: 249 WKPYRSVGSWYMWR 262
WKP+R++ ++ +W
Sbjct: 175 WKPFRTMATYLLWH 188
>gi|406705668|ref|YP_006756021.1| HhH-GPD superfamily base excision DNA repair protein [alpha
proteobacterium HIMB5]
gi|406651444|gb|AFS46844.1| HhH-GPD superfamily base excision DNA repair protein [alpha
proteobacterium HIMB5]
Length = 211
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 113/194 (58%), Gaps = 5/194 (2%)
Query: 72 ALRHLRDKDPLLATLIDAHRPPT---FESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVA 128
A ++L +KD ++ LI +++ P+ S + F SL KSI+ QQ++ AA S++ RF
Sbjct: 11 AKKYLSNKDKIMEKLIKSYKSPSEVILTSRKDIFFSLCKSIIGQQISVAAANSVFLRFKK 70
Query: 129 LFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMF 188
+ NG+ I P V ++ +LR+ G+S +K ++ L+++ + + + I +M+D
Sbjct: 71 VCNGK--IKPLIVSKLTTAKLRKCGLSRQKILGIKSLSKQMIEKSFNPKLIEKMNDEEAI 128
Query: 189 KMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEK 248
+ L+ ++ IG WS M ++F+ ++P++ P+ D+G+ + + Y LP + + ++
Sbjct: 129 EYLSKLRQIGKWSAEMILLFTYNRPNIWPIQDIGLLRAISKNYKKDYLPPEKFVNLLKKR 188
Query: 249 WKPYRSVGSWYMWR 262
+ PY SV +WY+WR
Sbjct: 189 FSPYCSVATWYLWR 202
>gi|212638179|ref|YP_002314699.1| 3-methyladenine DNA glycosylase [Anoxybacillus flavithermus WK1]
gi|212559659|gb|ACJ32714.1| 3-methyladenine DNA glycosylase [Anoxybacillus flavithermus WK1]
Length = 305
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 96/169 (56%), Gaps = 5/169 (2%)
Query: 102 FLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNIL-----PDAVLAVSPQQLREIGVSY 156
+ L K I++QQL K A + RFV F E + L P+ + +S +L+ + S
Sbjct: 137 YFCLIKCIIHQQLHMKVAYKMTERFVKTFGQEIDGLWFYPRPEQIARLSYDELKALQFSG 196
Query: 157 RKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVL 216
+KA Y+ D + +G L E +V+ D + K L +++GIG W+V F++F L +P++
Sbjct: 197 KKAEYMIDTSRLIVEGKLDLERLVDATDEEVMKTLLAIRGIGPWTVQNFLLFGLGRPNLF 256
Query: 217 PVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSWYMWRLME 265
P D+G+++ +Q L L+ P +ME + ++W+PY S S Y+WR +E
Sbjct: 257 PKADIGLQRAVQKLLSLETKPSLAQMEALSKRWEPYLSYASLYLWRSIE 305
>gi|374724550|gb|EHR76630.1| DNA-3-methyladenine glycosylase II [uncultured marine group II
euryarchaeote]
Length = 203
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/194 (34%), Positives = 108/194 (55%), Gaps = 8/194 (4%)
Query: 72 ALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFN 131
A HL KD LL ++ + + F +L +SI+ QQ++ AA +++ R + F
Sbjct: 12 ATEHLA-KDELLGPVLAQYPDGSLLGRGDLFCTLVRSIVGQQISVLAADAVWGR-LETFL 69
Query: 132 GEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKML 191
GE + P + P++L G+S KASY+ LAE+ ++ +LS + MDD +
Sbjct: 70 GE--VKPATIREKQPEELAACGLSRSKASYIHGLAEQ-SEALLSPD-WSAMDDNAIHAHF 125
Query: 192 TSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKP 251
TS +GIG W+ M IF+L +PDV +GD+G+ K +Q+L E + V E+W P
Sbjct: 126 TSFRGIGPWTSEMVCIFALLRPDVFSIGDIGLIKAVQILDPSAE--SKADVVRVAERWSP 183
Query: 252 YRSVGSWYMWRLME 265
YR+ SWY+WR+++
Sbjct: 184 YRTAASWYLWRMLD 197
>gi|445496218|ref|ZP_21463262.1| DNA-3-methyladenine glycosylase II [Janthinobacterium sp. HH01]
gi|444792379|gb|ELX13926.1| DNA-3-methyladenine glycosylase II [Janthinobacterium sp. HH01]
Length = 219
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 98/191 (51%), Gaps = 3/191 (1%)
Query: 75 HLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGED 134
L +D ++ LI PF +LA+SI+ QQ+ KAA + + + +
Sbjct: 27 ELMKRDRIMKKLIPQFGDLHLVGHDDPFTTLARSIVGQQVTTKAADVAWKKLLLV---SP 83
Query: 135 NILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSV 194
P ++ +QL G+S RK Y+ DLA+ + + + +MDD + L +
Sbjct: 84 KCTPAQIIKAGAEQLSACGLSKRKTEYILDLADHFKNKRVHTSQWDQMDDEAVIAELVQI 143
Query: 195 KGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRS 254
+GIG W+ MF+IF+L +P+VLP+ D G+ +G+ Y E EV W+P+R+
Sbjct: 144 RGIGRWTAEMFLIFNLLRPNVLPLDDPGLIQGISQNYFSGEPVSRSDAREVSANWEPWRT 203
Query: 255 VGSWYMWRLME 265
V +WY+WR ++
Sbjct: 204 VATWYLWRSLD 214
>gi|359394631|ref|ZP_09187684.1| DNA-3-methyladenine glycosylase 1 [Halomonas boliviensis LC1]
gi|357971878|gb|EHJ94323.1| DNA-3-methyladenine glycosylase 1 [Halomonas boliviensis LC1]
Length = 209
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/200 (32%), Positives = 106/200 (53%), Gaps = 17/200 (8%)
Query: 69 VDIALRHLRDKDPLLAT---LIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTR 125
++ A+ L DP +A L+ A PP E + F + +I+ QQL+ +AA++I R
Sbjct: 12 IEHAMAALAKADPDIARALPLVGA--PPPRERDKG-FATFFSTIVSQQLSTEAARAIMGR 68
Query: 126 FVALFNGEDNILPD----AVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVE 181
+ +LP+ AV+ V Q LR+ G+S+RK Y + LAE G S E + +
Sbjct: 69 V-------NTLLPELHAKAVMEVEGQALRDAGLSWRKIEYAKGLAEAELAGTFSAEGLEQ 121
Query: 182 MDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALK 241
+ D +T ++G G WS ++++FSL + D+ P DL +R L L G+ P +
Sbjct: 122 LSDDEAIAAITELRGFGRWSAEIYLMFSLKRQDIFPADDLALRVALGRLKGMDNKPTPKQ 181
Query: 242 MEEVCEKWKPYRSVGSWYMW 261
++ E W P+RSVGS ++W
Sbjct: 182 ARQLVEHWAPWRSVGSLFLW 201
>gi|242240588|ref|YP_002988769.1| DNA-3-methyladenine glycosylase II [Dickeya dadantii Ech703]
gi|242132645|gb|ACS86947.1| DNA-3-methyladenine glycosylase II [Dickeya dadantii Ech703]
Length = 225
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 94/169 (55%), Gaps = 3/169 (1%)
Query: 98 SRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNILPD--AVLAVSPQQLREIGVS 155
+ P+ +L +++ QQL+ +AA +I + F E+ P + P+ LR+ G S
Sbjct: 41 GQQPYEALIRAVASQQLSNRAAAAIIAKLQKQFAMEETGFPSPSQLAECPPEHLRQCGFS 100
Query: 156 YRKASYLRDLAEKYTDGILSDE-SIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPD 214
RK ++ +A G++ D S M+D T+ L ++ GIG W+V M +I +L + D
Sbjct: 101 SRKIDTVQAIARGAISGLVPDRASAALMEDDTLITQLCTLHGIGRWTVEMLLINTLERMD 160
Query: 215 VLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSWYMWRL 263
++PV DLG+R+G + LY L P +M + +PYR++ +WY+WR+
Sbjct: 161 IMPVDDLGIRQGFRYLYQLPSDPSRKEMLALSAPCQPYRTLAAWYLWRI 209
>gi|317489751|ref|ZP_07948250.1| HhH-GPD superfamily base excision DNA repair protein [Eggerthella
sp. 1_3_56FAA]
gi|316911097|gb|EFV32707.1| HhH-GPD superfamily base excision DNA repair protein [Eggerthella
sp. 1_3_56FAA]
Length = 219
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 117/220 (53%), Gaps = 12/220 (5%)
Query: 54 DNSPKIFKPLTFKGEVDIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQ 113
+ P+ F+ GE ++A +L +DP L + E F LA I+ QQ
Sbjct: 2 EREPRYFE----YGEAEVA--YLAARDPRLGEAMAVIGRIEREVHPDLFAVLANCIVGQQ 55
Query: 114 LAYKAAKSIYTRFVALFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGI 173
++ KA +I+ R + F + P+A+ A S +L+++G+S+RK Y++ A + G
Sbjct: 56 ISTKAQTTIWNRMLDRFG---EVTPEAMAACSDDELQQVGISFRKVGYIKGAAARVLSGE 112
Query: 174 LSDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGL 233
+ E + E+ D + + L+++ GIG W+ M M FS+ +P++L GDL + +GL++++
Sbjct: 113 VDLEGLAELSDDEVCRTLSALPGIGVWTAEMLMTFSMQRPNILSWGDLAIHRGLRMVHHH 172
Query: 234 KELPGALKMEEVCEKWKPYRSVGSWYMWRLMEAKGVLPNV 273
+ + L + ++ PY SV S Y+W + A G +P +
Sbjct: 173 RRITPEL-FAKYRRRYTPYGSVASLYLWEV--AGGAIPGM 209
>gi|148652307|ref|YP_001279400.1| HhH-GPD family protein [Psychrobacter sp. PRwf-1]
gi|148571391|gb|ABQ93450.1| DNA-3-methyladenine glycosylase II [Psychrobacter sp. PRwf-1]
Length = 231
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 107/209 (51%), Gaps = 8/209 (3%)
Query: 53 SDNSPKIFKPLTFKGEVDIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQ 112
S+ + + + + E++ ++ L D +P A + P+ +R F L ++++ Q
Sbjct: 17 SEPACNLIQTMNDLSELEGHIKQLIDIEPRFAPIYQQLGVPSLRRNRGGFRELMRAMVGQ 76
Query: 113 QLAYKAAKSIYTRFVALFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDG 172
QL+ AA SI+++ I PDA++ LR G+S +K Y+R L E D
Sbjct: 77 QLSVAAASSIWSKL----ENAALITPDAIMKADDDTLRSHGLSRQKIRYIRSLVEHDIDF 132
Query: 173 ILSDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYG 232
E++ + D + LT+V GIG W+ M+++FSL + D+L V DL ++ G + G
Sbjct: 133 ----EALAHLPDEAVISELTAVTGIGKWTAQMYLLFSLGRADILAVDDLAIKVGAMEVLG 188
Query: 233 LKELPGALKMEEVCEKWKPYRSVGSWYMW 261
L E P ++E + + W P+RS S +W
Sbjct: 189 LDERPTPKQLERLTQSWSPHRSAASLLLW 217
>gi|167746355|ref|ZP_02418482.1| hypothetical protein ANACAC_01064 [Anaerostipes caccae DSM 14662]
gi|167654348|gb|EDR98477.1| base excision DNA repair protein, HhH-GPD family [Anaerostipes
caccae DSM 14662]
Length = 242
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 115/211 (54%), Gaps = 8/211 (3%)
Query: 67 GEVDIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRF 126
GE +I +L+ +DP+L ID E F +L SI+ QQ++ KA ++++ R
Sbjct: 35 GEQEIG--YLKSRDPVLGQAIDRIGFIKREVHTELFAALVNSIVGQQISTKAQETVWRR- 91
Query: 127 VALFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVT 186
+ +G ++ P+ V + ++L+ G+S+RKA Y++ A++ G L E + E D
Sbjct: 92 --IKDGLSDVTPEKVGECTEEELQSFGISFRKAGYIKAAADRILSGSLDLEGLKEAGDEQ 149
Query: 187 MFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVC 246
+ K LT + G+G W+ M M FS+ +PD++ DL +++G+++LY + + L +
Sbjct: 150 VKKELTKLPGVGVWTAEMLMTFSMQRPDIVSYSDLAIQRGMRMLYHHRTITPKL-FAKYA 208
Query: 247 EKWKPYRSVGSWYMWRLMEAKGVLPNVAKAA 277
++ P +V S Y+W + A G LP + A
Sbjct: 209 GRYSPCGTVASLYLWAV--AGGALPELKDYA 237
>gi|148553471|ref|YP_001261053.1| DNA-3-methyladenine glycosylase II [Sphingomonas wittichii RW1]
gi|148498661|gb|ABQ66915.1| DNA-3-methyladenine glycosylase II [Sphingomonas wittichii RW1]
Length = 212
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 87/169 (51%), Gaps = 1/169 (0%)
Query: 96 ESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNILPDAVLAVSPQQLREIGVS 155
+++R P+ +L +SI YQQL +A +I R G P + P LR G S
Sbjct: 35 KAAREPYEALVRSIAYQQLTARAGDAIIDRLKTRLGGHGFPSPKQLADADPDALRACGFS 94
Query: 156 YRKASYLRDLAEKYTDGILSDESIVEMDDVT-MFKMLTSVKGIGAWSVHMFMIFSLHKPD 214
KA+ ++ +A G + + + LT+++GIG W+V M +I+SL + D
Sbjct: 95 AAKAATIQAIAGAALSGFVPGRDAAAAMEDEALIDRLTAIRGIGRWTVEMLLIYSLERLD 154
Query: 215 VLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSWYMWRL 263
VLP D G R+G ++L L P A + + W P+R+V +WY+WR+
Sbjct: 155 VLPADDFGAREGYRLLKALPAPPTARALRGIASAWAPHRTVATWYLWRI 203
>gi|393759332|ref|ZP_10348148.1| DNA-3-methyladenine glycosylase [Alcaligenes faecalis subsp.
faecalis NCIB 8687]
gi|393162560|gb|EJC62618.1| DNA-3-methyladenine glycosylase [Alcaligenes faecalis subsp.
faecalis NCIB 8687]
Length = 223
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 102/201 (50%), Gaps = 4/201 (1%)
Query: 70 DIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVAL 129
D A L +D +L LI H + F +L +SI+ QQLA + A ++ + L
Sbjct: 24 DDACAQLMKRDRILRKLIPQHGDYWLQHQAPAFTTLVRSIVGQQLASRTADQLWAK---L 80
Query: 130 FNGEDNIL-PDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMF 188
G L P +L + + L +G+ RKA Y+ DLA + + ++ + D +
Sbjct: 81 LEGCGQALSPQLILELGYETLHGLGLPKRKAEYIVDLATHFDARKIDPQAWQSLSDEAVI 140
Query: 189 KMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEK 248
L +++G+G W+ MF+IF+LH+PDVLP+ D G+ K + Y E + EV +
Sbjct: 141 ADLCAIRGVGRWTADMFLIFNLHRPDVLPLDDAGLLKAISQHYFSGEPVSRFEAREVAQA 200
Query: 249 WKPYRSVGSWYMWRLMEAKGV 269
W P+ +V +W++WR + V
Sbjct: 201 WAPWCTVATWHLWRSLNTVAV 221
>gi|407928598|gb|EKG21452.1| hypothetical protein MPH_01250 [Macrophomina phaseolina MS6]
Length = 377
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 87/278 (31%), Positives = 126/278 (45%), Gaps = 58/278 (20%)
Query: 8 SDNISQNPSASSKITFPPRKIRKLTTITPITKIAEIPVATAISTNSDNSPKIFKPLTFKG 67
+ N + NP +SS + PR + T P++ V ST +D+ T +
Sbjct: 129 ASNTNTNPPSSSPLK--PRPVDPHATNAPLSVPGGSRVVPHASTVADDE------TTTEN 180
Query: 68 EVDIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFV 127
++ A HL DP L T+ A AAKSI +F+
Sbjct: 181 LLEKACAHLISVDPRLRTVSGA----------------------------AAKSIQNKFI 212
Query: 128 ALFNGEDNIL-----PDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEM 182
ALF+ ++ P V A LR G+S RKA Y++ LAEK+ G LS + +VE
Sbjct: 213 ALFSNSNDSSSFFPSPAQVAAAELSLLRTAGLSGRKAEYVKGLAEKFASGELSAQMLVEA 272
Query: 183 DDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKM 242
D + + L +V+G+G WSV MF F+L + DV GDLGV++G+ G K++ LK
Sbjct: 273 SDAEVLEKLVAVRGLGRWSVEMFACFALKRTDVFSTGDLGVQRGMAAWLG-KDV-AKLKA 330
Query: 243 EEVCEKWK---------------PYRSVGSWYMWRLME 265
KWK PYRS+ WYMWR+ +
Sbjct: 331 NGKGGKWKYLSEKEMLDRSAPFAPYRSLFMWYMWRIED 368
>gi|453328879|dbj|GAC88878.1| DNA-3-methyladenine glycosylase [Gluconobacter thailandicus NBRC
3255]
Length = 216
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 111/202 (54%), Gaps = 8/202 (3%)
Query: 80 DPLLATLIDAHRPPTFES--SRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNG--EDN 135
DP +A ++ P + P+ +L ++I QQL AA+ I+ R L + ED
Sbjct: 12 DPDVAAAVERIGPCRLRGHDGQEPYDALLRAIAGQQLHGAAARRIFGRLCLLGHASSEDG 71
Query: 136 I--LPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVE-MDDVTMFKMLT 192
+P+A+LA + LR G+S K + +R +A+ +G++ E +DD + + L
Sbjct: 72 PPPVPEALLAFPEETLRACGLSASKQAAMRGVAQARLEGLVPTRLEAERLDDEDLIQRLI 131
Query: 193 SVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPY 252
+++G+G W+V M ++F+L +PDV+PV D GVR+G + + L+ P ++ ++ P+
Sbjct: 132 TLRGVGRWTVEMILMFTLGRPDVMPVDDFGVREGWRRIKRLETAPRPKDLKTETLRFSPH 191
Query: 253 RSVGSWYMWRLM-EAKGVLPNV 273
RS +WY WR+ E K PN+
Sbjct: 192 RSALAWYCWRVAEEGKKTAPNI 213
>gi|378823317|ref|ZP_09845973.1| base excision DNA repair protein, HhH-GPD family [Sutterella
parvirubra YIT 11816]
gi|378597866|gb|EHY31098.1| base excision DNA repair protein, HhH-GPD family [Sutterella
parvirubra YIT 11816]
Length = 216
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/192 (34%), Positives = 100/192 (52%), Gaps = 5/192 (2%)
Query: 70 DIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVAL 129
D AL HL D LA + PF SL K I+ QQ++ KA ++++ R A
Sbjct: 10 DEALDHLASLDDELAHAVRVIGRVERTMEPDPFRSLMKHIVGQQISTKAQEAVWARVTAR 69
Query: 130 FNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFK 189
+ P+AV A+ ++LR G+S +KA ++R +A K G E++ D +
Sbjct: 70 VG---TVTPEAVAALPEEELRACGMSLKKADWMRAIAVKVASGETDLEALRRAPDAEVVA 126
Query: 190 MLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKW 249
LT+ G+G W+ M MIFS +PDVL +GD GVR G++V+YG + L+ E+ +
Sbjct: 127 ALTAFAGVGLWTAEMLMIFSYGRPDVLSIGDFGVRHGVRVVYGREMTTKELR--ELKTRV 184
Query: 250 KPYRSVGSWYMW 261
P+ SV S W
Sbjct: 185 SPWGSVASIIFW 196
>gi|425737134|ref|ZP_18855408.1| DNA-3-methyladenine glycosidase [Staphylococcus massiliensis S46]
gi|425482855|gb|EKU50009.1| DNA-3-methyladenine glycosidase [Staphylococcus massiliensis S46]
Length = 224
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/225 (30%), Positives = 118/225 (52%), Gaps = 30/225 (13%)
Query: 37 ITKIAEIPVATAISTNSDNSPKIFKPLTFKGEVDIALRHLRDKDPLLATLIDAHRPPTFE 96
+ +I+E PV I ++ + K +T G+++I +R P +
Sbjct: 8 VIRISEAPVQALIEKDA----TLKKLITHLGDIEIDIR------------------PYY- 44
Query: 97 SSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNILPDAVLAVSPQQLREIGVSY 156
F SL +SI+ QQ+++ AA+++++R V L G D + D V +S + L ++G+S
Sbjct: 45 -----FKSLVRSIVGQQISFPAAEAVFSRVVEL-TGHDFTV-DKVAQLSDEALLDVGLSR 97
Query: 157 RKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVL 216
K Y RDL G L E + +DD T+ K LT VKGIG W+ M++IF+L +P++L
Sbjct: 98 AKVKYTRDLIRCIQSGELDLERLDSLDDQTVLKQLTQVKGIGKWTAEMYLIFTLRRPNIL 157
Query: 217 PVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSWYMW 261
V D+ +++ ++ LY + ++E W PY S S+Y+W
Sbjct: 158 AVDDVALQRVVEWLYQVDRDSRKRVLKEKKALWSPYLSYASFYLW 202
>gi|258515728|ref|YP_003191950.1| HhH-GPD family protein [Desulfotomaculum acetoxidans DSM 771]
gi|257779433|gb|ACV63327.1| HhH-GPD family protein [Desulfotomaculum acetoxidans DSM 771]
Length = 201
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 98/162 (60%), Gaps = 4/162 (2%)
Query: 102 FLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNILPDAVLAVSPQQLREIGVSYRKASY 161
F +L SI+ QQ++ KAA +++ RF+ F D I + + +++++ G++ +KA Y
Sbjct: 40 FAALVHSIISQQISSKAAATVWNRFLERF---DEITSQKIAYTTAEEIQQCGITMKKAIY 96
Query: 162 LRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDL 221
++ +A+ G + + + E+ D + K L+++ GIG W+ M M FS+ +P+V+ GDL
Sbjct: 97 IKSIADAVMQGEFNIDELSELPDEEVCKRLSALNGIGVWTAEMLMTFSMQRPNVMSWGDL 156
Query: 222 GVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSWYMWRL 263
+R+G+ +LY ++L A K E+ ++ PY ++ S Y+W +
Sbjct: 157 AIRRGIMMLYHHRKLDKA-KFEKYKRRYSPYCTIASLYLWEI 197
>gi|255654622|ref|ZP_05400031.1| methylated-DNA--protein-cysteine methyltransferase [Clostridium
difficile QCD-23m63]
gi|296449396|ref|ZP_06891177.1| methylated-DNA--protein-cysteine methyltransferase [Clostridium
difficile NAP08]
gi|296880668|ref|ZP_06904622.1| methylated-DNA--protein-cysteine methyltransferase [Clostridium
difficile NAP07]
gi|296261742|gb|EFH08556.1| methylated-DNA--protein-cysteine methyltransferase [Clostridium
difficile NAP08]
gi|296428327|gb|EFH14220.1| methylated-DNA--protein-cysteine methyltransferase [Clostridium
difficile NAP07]
Length = 217
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 108/205 (52%), Gaps = 6/205 (2%)
Query: 73 LRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNG 132
+ +L+ KD +L+ +ID E F S+ I+ QQ++ KA +I+ R
Sbjct: 10 IEYLKHKDKILSDIIDKIGHIEREIDTDLFSSVIHHIIGQQISTKAQATIWKRMKEHLK- 68
Query: 133 EDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLT 192
I ++L+ L+ G++YRKA YL D A K +G +SI M D LT
Sbjct: 69 --EINASSILSAGTTGLQSFGMTYRKAEYLTDFATKIQNGEFDLQSITYMSDKEAIDKLT 126
Query: 193 SVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPY 252
S+KGIG W+ M ++F L +P++ DL +++GL+++Y +++ + E+ +++ PY
Sbjct: 127 SLKGIGVWTAEMILLFCLQRPNIFSFDDLAIQRGLRMVYHHRKITRKM-FEKYQKRFSPY 185
Query: 253 RSVGSWYMWRLMEAKGVLPNVAKAA 277
SV S Y+W + A GV+ + A
Sbjct: 186 CSVASLYLWAV--AGGVIDGMRDYA 208
>gi|291543903|emb|CBL17012.1| DNA-3-methyladenine glycosylase II [Ruminococcus champanellensis
18P13]
Length = 214
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 109/207 (52%), Gaps = 8/207 (3%)
Query: 67 GEVDIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRF 126
GE +I+ +LR KD L +ID E F S+ I+ QQ++ KA +I+ R
Sbjct: 6 GEREIS--YLRQKDRRLCEVIDRIGHIDREVDTDLFSSVIHHIIGQQISTKAQATIWLRM 63
Query: 127 VALFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVT 186
+ + +L+ +L+ +G+++RKA Y+ D A+K G + E++ M D
Sbjct: 64 QEALG---KVNAETILSAGAPKLQSLGMTFRKAEYITDFAQKVCSGACNLEAVWHMTDAD 120
Query: 187 MFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVC 246
+ L ++KGIG W+ M ++F + +PD+ DL +++GL+++Y + + L E+
Sbjct: 121 AIRALCTLKGIGVWTAEMILLFCMQRPDIFSFDDLAIQRGLRMVYHHRNIDRKL-FEKYR 179
Query: 247 EKWKPYRSVGSWYMWRLMEAKGVLPNV 273
++ PY SV S Y+W A G +P +
Sbjct: 180 RRFTPYCSVASLYLW--AAAGGAIPEL 204
>gi|303328110|ref|ZP_07358549.1| putative DNA-3-methyladenine glycosylase II [Desulfovibrio sp.
3_1_syn3]
gi|302861936|gb|EFL84871.1| putative DNA-3-methyladenine glycosylase II [Desulfovibrio sp.
3_1_syn3]
Length = 234
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 111/207 (53%), Gaps = 8/207 (3%)
Query: 67 GEVDIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRF 126
GE +IA HL+ +D LA +I+ P E F +L +I+ QQ+A +A ++I+ R
Sbjct: 8 GEQEIA--HLKARDKRLAEIIELIGPVRREVVPDLFEALIHAIVGQQIATRAQQTIWARM 65
Query: 127 VALFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVT 186
A G I P + S L+ G+S+RK Y++ AE+ G E++ + D
Sbjct: 66 RA---GLGAITPGVIRETSETGLQAFGLSFRKVGYMKAAAERVLSGEFDVEALRTLPDDA 122
Query: 187 MFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVC 246
+ L + G+G W+ M M FSL +PDV+ GDL +++GL++LY + + L ++
Sbjct: 123 LCAELARLPGVGVWTAEMLMTFSLQRPDVISYGDLAIQRGLRMLYRHRRVDRKL-FDKYR 181
Query: 247 EKWKPYRSVGSWYMWRLMEAKGVLPNV 273
++ P+ +V S Y+W + A G +P +
Sbjct: 182 RRYAPHATVASLYLWAV--AGGAVPGL 206
>gi|331241158|ref|XP_003333228.1| hypothetical protein PGTG_14148 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309312218|gb|EFP88809.1| hypothetical protein PGTG_14148 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 352
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/237 (31%), Positives = 107/237 (45%), Gaps = 67/237 (28%)
Query: 101 PFLSLAKSILYQQLAYKAAKSIYTRFVALFNGE------DNILPDAVLAVSPQQ------ 148
PF +L SIL QQ++ AA+SI +F+ LF E N P SP
Sbjct: 119 PFRNLCCSILGQQVSCLAARSITYKFIKLFQPELPPKLEPNTRPSEFQFPSPSDVLHTPV 178
Query: 149 --LREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIGAWSVHMFM 206
LR G+S RKA Y+ DLA+++ D L ++++ M+ + L V+GIG W+ MF+
Sbjct: 179 LTLRTAGLSQRKAEYIHDLAQRFVDRRLDPQALLTMEPRMVVNELCKVRGIGRWTAEMFL 238
Query: 207 IFSLHKPDVLPVGDLGVRKGLQVLY------------------------GL--------- 233
IF + PD+LP DL ++KG+ Y GL
Sbjct: 239 IFCVKHPDILPHADLAIQKGILRWYTTALLPLKAEEGRGSKKEAEEGNAGLSTPPIPVGC 298
Query: 234 ----KEL---------PG----ALKMEEVCEKWKPYRSVGSWYMWRLMEAKGVLPNV 273
+EL PG L+ME++ E+WKPYRS+ YMW L G +P
Sbjct: 299 PLSRQELSRRLTKPLKPGLFLTPLEMEQLTEQWKPYRSLPVCYMWSLT---GFIPEC 352
>gi|328951382|ref|YP_004368717.1| HhH-GPD family protein [Marinithermus hydrothermalis DSM 14884]
gi|328451706|gb|AEB12607.1| HhH-GPD family protein [Marinithermus hydrothermalis DSM 14884]
Length = 201
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/189 (35%), Positives = 109/189 (57%), Gaps = 12/189 (6%)
Query: 80 DPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNILPD 139
DP++A L+ H P + P+ +L ++I+ QQL+ AA++IY R A + P
Sbjct: 23 DPVMAALVARHGPYRW-GLHPPYATLVRAIVGQQLSNAAARTIYARLKA----RVGLDPA 77
Query: 140 AVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIGA 199
A+LA S LR +G+S K YLR LA +G L E + + D + + L ++KG+G
Sbjct: 78 ALLAASEASLRAVGLSRVKIGYLRGLARFALEGGL--EGLEALPDAEVARQLGALKGVGP 135
Query: 200 WSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSWY 259
W+V M +IF L + +V PV DLG+ + + LYG+ + G +++ E+++PYRS +WY
Sbjct: 136 WTVEMLLIFGLGRMNVWPVADLGLARQARALYGVADRAGLVRL---GERFQPYRSAAAWY 192
Query: 260 MWRLMEAKG 268
+W EA G
Sbjct: 193 LW--AEADG 199
>gi|238798570|ref|ZP_04642047.1| Methylated-DNA--protein-cysteine methyltransferase [Yersinia
mollaretii ATCC 43969]
gi|238717590|gb|EEQ09429.1| Methylated-DNA--protein-cysteine methyltransferase [Yersinia
mollaretii ATCC 43969]
Length = 201
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/199 (34%), Positives = 104/199 (52%), Gaps = 10/199 (5%)
Query: 67 GEVDIALRHLRDKDPLLATLIDAHRPPTFESSRSP--FLSLAKSILYQQLAYKAAKSIYT 124
GE +I HL+ +D +A ID R SP F +L ++I+ QQ++ KAA ++
Sbjct: 6 GETEI--NHLKRRDKKMAAAID--RLGMIARPLSPDLFAALIRNIVDQQISVKAALTVNA 61
Query: 125 RFVALFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDD 184
R VAL I P V A S + ++ G++ +KA Y++ AE +G L +I ++ D
Sbjct: 62 RLVALLG---TITPFTVAAASAEAIQGCGMTMKKAGYIKGAAEAALNGSLDLAAIAQLPD 118
Query: 185 VTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEE 244
+ L+++ G+G W+ M MI SL +PDVL GDL +R+G+ LY K LP
Sbjct: 119 SDVITQLSNLNGVGIWTAEMLMISSLCRPDVLSWGDLAIRRGMMNLYRHKTLPRERFERY 178
Query: 245 VCEKWKPYRSVGSWYMWRL 263
PY + S Y+W L
Sbjct: 179 RRRY-APYGTTASLYLWAL 196
>gi|320335587|ref|YP_004172298.1| HhH-GPD family protein [Deinococcus maricopensis DSM 21211]
gi|319756876|gb|ADV68633.1| HhH-GPD family protein [Deinococcus maricopensis DSM 21211]
Length = 199
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 67/191 (35%), Positives = 103/191 (53%), Gaps = 11/191 (5%)
Query: 72 ALRHLRDKDPLLATLIDAHRP-PTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALF 130
AL+H + +DP+LA ++ A P S PF +L +S++ QQL+ +AA +I R AL
Sbjct: 11 ALQHFQ-RDPVLAAIVAAEGPLAPLPVSPDPFATLVRSVIGQQLSVRAANTIEARVRAL- 68
Query: 131 NGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKM 190
++ + + A+S + LR G+S K + L + DG L E +V + D +
Sbjct: 69 --APDLSAEQLAALSAETLRAAGLSGAKVRTVHALVARVLDGTLDFERLVTLPDEDVIAA 126
Query: 191 LTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWK 250
L + GIG W+ MF++F+L +PDV GDLG+R+ L+ Y +L L V W
Sbjct: 127 LVPLPGIGRWTAEMFLMFALGRPDVFAWGDLGLRRALERHY--PDLDPVL----VVAAWS 180
Query: 251 PYRSVGSWYMW 261
PYRS + YMW
Sbjct: 181 PYRSAAARYMW 191
>gi|345891263|ref|ZP_08842113.1| hypothetical protein HMPREF1022_00773 [Desulfovibrio sp.
6_1_46AFAA]
gi|345048405|gb|EGW52240.1| hypothetical protein HMPREF1022_00773 [Desulfovibrio sp.
6_1_46AFAA]
Length = 234
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 111/207 (53%), Gaps = 8/207 (3%)
Query: 67 GEVDIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRF 126
GE +IA HL+ +D LA +I+ P E F +L +I+ QQ+A +A ++I+ R
Sbjct: 8 GEQEIA--HLKARDKRLAEIIELIGPVRREVVPDLFEALIHAIVGQQIATRAQQTIWARM 65
Query: 127 VALFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVT 186
A G I P + S L+ G+S+RK Y++ AE+ G E++ + D
Sbjct: 66 RA---GLGAITPGVIRETSETGLQAFGLSFRKVGYMKAAAERVLSGEFDVEALRTLPDNA 122
Query: 187 MFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVC 246
+ L + G+G W+ M M FSL +PDV+ GDL +++GL++LY + + L ++
Sbjct: 123 LCAELARLPGVGVWTAEMLMTFSLQRPDVISYGDLAIQRGLRMLYRHRRVDRKL-FDKYR 181
Query: 247 EKWKPYRSVGSWYMWRLMEAKGVLPNV 273
++ P+ +V S Y+W + A G +P +
Sbjct: 182 RRYAPHATVASLYLWAV--AGGAVPGL 206
>gi|422681813|ref|ZP_16740081.1| DNA-3-methyladenine glycosylase 1 [Pseudomonas syringae pv. tabaci
str. ATCC 11528]
gi|331011155|gb|EGH91211.1| DNA-3-methyladenine glycosylase 1 [Pseudomonas syringae pv. tabaci
str. ATCC 11528]
Length = 204
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 56/168 (33%), Positives = 95/168 (56%), Gaps = 1/168 (0%)
Query: 97 SSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNILPDAVLAVSPQQLREIGVSY 156
+++ PF +L K++ YQQL KA ++ R ALF A++ + Q LR G S
Sbjct: 25 AAQDPFQALIKAVAYQQLHAKAGDAMVVRLRALFPDATFPAAQALIDLDEQTLRSCGFSA 84
Query: 157 RKASYLRDLAEKYTDGILSDESI-VEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDV 215
K ++ +A DG++ D S + M + + + L + G+G W+V M +I+ L + DV
Sbjct: 85 SKCRAIKAIAAARVDGLVPDVSAALAMSNEALVERLIQLPGVGRWTVEMMLIYGLGQMDV 144
Query: 216 LPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSWYMWRL 263
+P D GV +G + LY L+ PG +M + E++ PYR++ +WY+WR+
Sbjct: 145 MPASDYGVCEGYRRLYALELKPGHREMARIGERFGPYRTIAAWYLWRV 192
>gi|448639440|ref|ZP_21676766.1| DNA-3-methyladenine glycosylase [Haloarcula sinaiiensis ATCC 33800]
gi|448658503|ref|ZP_21682903.1| DNA-3-methyladenine glycosylase [Haloarcula californiae ATCC 33799]
gi|445761228|gb|EMA12477.1| DNA-3-methyladenine glycosylase [Haloarcula californiae ATCC 33799]
gi|445762719|gb|EMA13937.1| DNA-3-methyladenine glycosylase [Haloarcula sinaiiensis ATCC 33800]
Length = 203
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 100/186 (53%), Gaps = 6/186 (3%)
Query: 80 DPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNILPD 139
DP + L++ H T + + F L SIL QQ++ +A + R LF+ + P
Sbjct: 12 DPDIGPLVETHGELTLDPASDLFERLVVSILRQQVSMASAAATRER---LFDAV-TVTPA 67
Query: 140 AVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIGA 199
+ LR+ G+S +K Y+ ++A+ + + S E+ + D + + LT++ G+G
Sbjct: 68 GIKDADNDLLRDAGLSRQKTRYVNEVADAFLEHGYSLETFEDAADEEIHEELTAITGVGD 127
Query: 200 WSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSWY 259
W+ +M ++F+ + DV PVGDLG+RKG + + G + +M E E+W PYRS S Y
Sbjct: 128 WTANMQLLFAFGRKDVFPVGDLGIRKGFEAVVG--DGYSRAEMREYAERWSPYRSYASLY 185
Query: 260 MWRLME 265
+WR E
Sbjct: 186 LWRASE 191
>gi|225683647|gb|EEH21931.1| DNA-3-methyladenine glycosylase [Paracoccidioides brasiliensis
Pb03]
Length = 407
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 76/232 (32%), Positives = 105/232 (45%), Gaps = 41/232 (17%)
Query: 42 EIPVATAISTNSDNSPKIFKPLTFKGEV-DIALRHLRDKDPLLATLIDAHRPPTFESSR- 99
E P A + S S ++ +P T G V + A+ HL P L +ID H P F +
Sbjct: 143 EKPSDAATPSPSKCSGRLPRPTTTTGTVLEEAVAHLITVAPQLKPVIDKHPCPLFSPAGL 202
Query: 100 ----SPFLSLAKSILYQQLAYKAAKSIYTRFVALF-------------NGEDNI------ 136
PF +L I+ QQ++ AAKSI RF+ LF NG D
Sbjct: 203 AEEIDPFNALVSGIIGQQVSGAAAKSIKRRFLGLFGCLDCNGNAEASNNGVDATEKGVGE 262
Query: 137 ----------------LPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIV 180
P V A LR G+S RKA Y++ LAEK+ G LS ++
Sbjct: 263 EKERAEMRYDRDDHFPTPAQVAACGVATLRTAGLSQRKAEYIQGLAEKFASGELSAHMLL 322
Query: 181 EMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYG 232
+ D + + L +V+G+G WSV MF F L + DV GDLGV++G+ G
Sbjct: 323 QASDEEVLEKLIAVRGLGRWSVEMFECFGLKRMDVFSTGDLGVQRGMATFVG 374
>gi|357032199|ref|ZP_09094139.1| DNA-3-methyladenine glycosylase [Gluconobacter morbifer G707]
gi|356414426|gb|EHH68073.1| DNA-3-methyladenine glycosylase [Gluconobacter morbifer G707]
Length = 217
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 99/177 (55%), Gaps = 9/177 (5%)
Query: 96 ESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNI------LPDAVLAVSPQQL 149
+ + P+ +L ++I QQL AA+ I+ R AL G + P+ +LA+ + L
Sbjct: 31 DDGQEPYDALLRAIAGQQLHGAAARKIFGRVRAL--GPSGLQDGPPPAPETLLALPEETL 88
Query: 150 REIGVSYRKASYLRDLAEKYTDGIL-SDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIF 208
R G+S K + +R +A DG++ S + + D + LT+++GIG W+V M +IF
Sbjct: 89 RACGLSASKQTAMRGVARARLDGLVPSRDEAALLSDADLIARLTTLRGIGRWTVEMLLIF 148
Query: 209 SLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSWYMWRLME 265
+L++PDV+PV D G R+G + + G + P ++ E + P+RS +WY WR+ E
Sbjct: 149 TLNRPDVMPVDDFGAREGWRRIKGRVDAPKPRLLKAETECFAPWRSTLAWYCWRVSE 205
>gi|55377906|ref|YP_135756.1| DNA-3-methyladenine glycosylase [Haloarcula marismortui ATCC 43049]
gi|55230631|gb|AAV46050.1| DNA-3-methyladenine glycosylase [Haloarcula marismortui ATCC 43049]
Length = 203
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 100/186 (53%), Gaps = 6/186 (3%)
Query: 80 DPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNILPD 139
DP + L++ H T + + F L SIL QQ++ +A + R LF+ + P
Sbjct: 12 DPDIGPLVETHGELTLDPASDLFERLVVSILRQQVSMASAAATRER---LFDAV-TVTPA 67
Query: 140 AVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIGA 199
+ LR+ G+S +K Y+ ++A+ + + S E+ + D + + LT++ G+G
Sbjct: 68 GIKDADNDLLRDAGLSRQKTRYVNEVADAFLEHGYSLEAFEDAADEEIHEELTAITGVGD 127
Query: 200 WSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSWY 259
W+ +M ++F+ + DV PVGDLG+RKG + + G + +M E E+W PYRS S Y
Sbjct: 128 WTANMQLLFAFGRKDVFPVGDLGIRKGFEAVVG--DGYSRAEMREYAERWSPYRSYASLY 185
Query: 260 MWRLME 265
+WR E
Sbjct: 186 LWRASE 191
>gi|329665897|pdb|2YG8|A Chain A, Structure Of An Unusual 3-Methyladenine Dna Glycosylase Ii
( Alka) From Deinococcus Radiodurans
gi|329665898|pdb|2YG8|B Chain B, Structure Of An Unusual 3-Methyladenine Dna Glycosylase Ii
( Alka) From Deinococcus Radiodurans
Length = 225
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 69/206 (33%), Positives = 105/206 (50%), Gaps = 14/206 (6%)
Query: 57 PKIFKPLTFKGEVDIALRHLRDKDPLLATLID-AHRPPTFESSRSPFLSLAKSILYQQLA 115
P + PLT A+ HL +DP+LA + P + PF L +S+ QQL+
Sbjct: 20 PAVLPPLTDHAG---AVAHL-SRDPVLAQVTSLCGELPVLAPTPDPFGRLVRSVAGQQLS 75
Query: 116 YKAAKSIYTRFVALFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILS 175
KAA++IY R L G ++P A+L VS LR +G+S+ K ++ A G +
Sbjct: 76 VKAAQAIYGRLEGLPGG---VVPAALLKVSGDDLRGVGLSWAKVRTVQAAAAAAVSGQID 132
Query: 176 DESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKE 235
+ D + L + GIG W+ F++F+L +PDV GDL +R+G++ LY
Sbjct: 133 FAHLSGQPDELVIAELVQLPGIGRWTAEXFLLFALARPDVFSSGDLALRQGVERLY---- 188
Query: 236 LPGALKMEEVCEKWKPYRSVGSWYMW 261
PG +V +W PYRS+ S Y+W
Sbjct: 189 -PGE-DWRDVTARWAPYRSLASRYLW 212
>gi|238784724|ref|ZP_04628728.1| Methylated-DNA--protein-cysteine methyltransferase [Yersinia
bercovieri ATCC 43970]
gi|238714403|gb|EEQ06411.1| Methylated-DNA--protein-cysteine methyltransferase [Yersinia
bercovieri ATCC 43970]
Length = 201
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 67/199 (33%), Positives = 104/199 (52%), Gaps = 10/199 (5%)
Query: 67 GEVDIALRHLRDKDPLLATLIDAHRPPTFESSRSP--FLSLAKSILYQQLAYKAAKSIYT 124
GE +I HL+ +D +A ID R SP F +L ++I+ QQ++ KAA ++
Sbjct: 6 GETEI--NHLKRRDKKMAAAID--RLGMIARPLSPDLFAALIRNIVDQQISVKAAITVNA 61
Query: 125 RFVALFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDD 184
R VAL I P V S + ++ G++ +KA Y++ AE DG L+ +I ++ D
Sbjct: 62 RLVALLGA---ITPITVAQASAETIQGCGMTMKKAGYIKGAAEAALDGSLNLAAIAQLPD 118
Query: 185 VTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEE 244
+ L+S+ G+G W+ M +I SL +PDVL GDL +R+G+ LY K +P
Sbjct: 119 NEVITQLSSLNGVGVWTAEMLLISSLARPDVLSWGDLAIRRGMMNLYRHKTVPRERFERY 178
Query: 245 VCEKWKPYRSVGSWYMWRL 263
PY + S Y+W L
Sbjct: 179 RRRY-APYGTTASLYLWAL 196
>gi|415885802|ref|ZP_11547625.1| YfjP [Bacillus methanolicus MGA3]
gi|387588455|gb|EIJ80776.1| YfjP [Bacillus methanolicus MGA3]
Length = 286
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 110/215 (51%), Gaps = 7/215 (3%)
Query: 58 KIFKPLT--FKGEVDIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLA 115
K K LT F+ V + H ++ L + D H P+ L K I++QQL
Sbjct: 72 KAMKRLTHIFQWHVPLEKIHAHFQNTALKKIFDEHYGTPLVLDFDPYSCLLKCIIHQQLN 131
Query: 116 YKAAKSIYTRFVALFNGEDNIL-----PDAVLAVSPQQLREIGVSYRKASYLRDLAEKYT 170
A ++ RFV F ++ + P+ + +++ +QLR++ S RK+ Y+ +A++
Sbjct: 132 LAFAHTLTERFVKTFGFQEKGVWFYPPPEKIASLTVEQLRQLQFSGRKSEYVIGIAKEAA 191
Query: 171 DGILSDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVL 230
+G L + + D + + L ++G+G W+V F+IF L +P+ P D+G++ L+ L
Sbjct: 192 EGRLRFDELDMKSDEEIMEELIRLRGVGPWTVQNFLIFGLGRPNQFPTADIGIQNALKKL 251
Query: 231 YGLKELPGALKMEEVCEKWKPYRSVGSWYMWRLME 265
Y L+ P ++ E + W PY S S Y+WR +E
Sbjct: 252 YNLERKPTIEEINEYKKSWAPYLSYASLYLWRSIE 286
>gi|406863577|gb|EKD16624.1| HhH-GPD superfamily base excision DNA repair protein [Marssonina
brunnea f. sp. 'multigermtubi' MB_m1]
Length = 454
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 65/176 (36%), Positives = 92/176 (52%), Gaps = 12/176 (6%)
Query: 69 VDIALRHLRDKDPLLATLIDAH-----RPPTFESSRSPFLSLAKSILYQQLAYKAAKSIY 123
+D A+ HL +P L +I+ + P PF+SLA I+ QQ++ AAKSI
Sbjct: 140 LDEAVAHLIKVEPKLKPVIEKYPCHMFSPDGLAEDIDPFMSLASGIISQQVSGAAAKSIK 199
Query: 124 TRFVALFNGEDNIL-------PDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSD 176
+FVALFN + + P V + + LR G+S RKA Y+ LAEK+ G ++
Sbjct: 200 AKFVALFNTDQPDVSLHKFPAPSQVCSTKIEVLRTAGLSQRKAEYILGLAEKFHKGEITT 259
Query: 177 ESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYG 232
+ + K L V+G+G WSV MF F L + DV GDLGV++GL L G
Sbjct: 260 SMLSTATYEEVLKELIQVRGLGKWSVEMFACFGLKRMDVFSTGDLGVQRGLAALAG 315
>gi|402824950|ref|ZP_10874281.1| HhH-GPD [Sphingomonas sp. LH128]
gi|402261526|gb|EJU11558.1| HhH-GPD [Sphingomonas sp. LH128]
Length = 205
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 63/194 (32%), Positives = 100/194 (51%), Gaps = 3/194 (1%)
Query: 68 EVDIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFV 127
E+ L + K+P +A I P + + +L ++I+ QQ++ AA S++ R
Sbjct: 7 ELRFGLDAIAGKEPAIARAIAIAGYPEPRIRATGYATLLRTIVGQQVSVAAAASVWNRLE 66
Query: 128 ALFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTM 187
AL + + P+A+LA LR G+S +K Y R L E G L +S+ DD
Sbjct: 67 ALLG--ETMAPEALLAAEFDALRGCGLSRQKQGYARSLCELVVAGSLDFDSL-PADDEEA 123
Query: 188 FKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCE 247
L +KGIG WS ++++F+ +PD+ P GDL V+ GL L GL E P + E+ E
Sbjct: 124 IAHLVQIKGIGRWSAEIYLLFAEGRPDIWPAGDLAVQVGLGKLLGLPERPSEKQTRELAE 183
Query: 248 KWKPYRSVGSWYMW 261
W+P+R + + W
Sbjct: 184 AWRPHRGAAAIFTW 197
>gi|403237149|ref|ZP_10915735.1| hypothetical protein B1040_15389 [Bacillus sp. 10403023]
Length = 288
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 105/203 (51%), Gaps = 7/203 (3%)
Query: 70 DIALRHLRDKDPL--LATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFV 127
++ L+ ++D L L + HR P+ L K I++QQL A ++ +RFV
Sbjct: 86 EVPLKDIQDYFLLTDLQDIFIEHRGTPLVLDFDPYYCLMKCIIHQQLNMTFAYTLTSRFV 145
Query: 128 ALFNGED-----NILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEM 182
F E + P+ + +S LRE+ S RKA Y+ D ++ G L+ +
Sbjct: 146 TTFGQEIEGTWIHPRPEKIAQLSVADLRELQFSGRKAEYVIDTSKLIAAGELTLADLQSK 205
Query: 183 DDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKM 242
D + L ++GIG W+ F++F+L +P++ P+ D+G++ ++ LY L + P +M
Sbjct: 206 TDEEVIDTLVKIRGIGKWTAQNFLLFALGRPNLFPIADIGIQNAIKKLYNLDKKPTYEQM 265
Query: 243 EEVCEKWKPYRSVGSWYMWRLME 265
EE + W+PY S S Y+WR +E
Sbjct: 266 EEYSKPWEPYLSYASLYLWRSIE 288
>gi|257484797|ref|ZP_05638838.1| DNA-3-methyladenine glycosylase 1 [Pseudomonas syringae pv. tabaci
str. ATCC 11528]
gi|416027971|ref|ZP_11571145.1| DNA-3-methyladenine glycosylase 1 [Pseudomonas syringae pv.
glycinea str. race 4]
gi|422404135|ref|ZP_16481190.1| DNA-3-methyladenine glycosylase 1 [Pseudomonas syringae pv.
glycinea str. race 4]
gi|422605305|ref|ZP_16677319.1| DNA-3-methyladenine glycosylase 1 [Pseudomonas syringae pv. mori
str. 301020]
gi|320328091|gb|EFW84096.1| DNA-3-methyladenine glycosylase 1 [Pseudomonas syringae pv.
glycinea str. race 4]
gi|330875940|gb|EGH10089.1| DNA-3-methyladenine glycosylase 1 [Pseudomonas syringae pv.
glycinea str. race 4]
gi|330888961|gb|EGH21622.1| DNA-3-methyladenine glycosylase 1 [Pseudomonas syringae pv. mori
str. 301020]
Length = 204
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 56/168 (33%), Positives = 95/168 (56%), Gaps = 1/168 (0%)
Query: 97 SSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNILPDAVLAVSPQQLREIGVSY 156
+++ PF +L K++ YQQL KA ++ R ALF A++ + Q LR G S
Sbjct: 25 AAQDPFQALIKAVAYQQLHAKAGDAMVMRLRALFPDATFPAAQALIDLDEQTLRSCGFSA 84
Query: 157 RKASYLRDLAEKYTDGILSDESI-VEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDV 215
K ++ +A DG++ D S + M + + + L + G+G W+V M +I+ L + DV
Sbjct: 85 SKCRAIKAIAAARVDGLVPDVSAALAMSNEALVERLIQLPGVGRWTVEMMLIYGLGQMDV 144
Query: 216 LPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSWYMWRL 263
+P D GV +G + LY L+ PG +M + E++ PYR++ +WY+WR+
Sbjct: 145 MPASDYGVCEGYRRLYALELKPGHREMARIGERFGPYRTIAAWYLWRV 192
>gi|416017493|ref|ZP_11564612.1| DNA-3-methyladenine glycosylase 1 [Pseudomonas syringae pv.
glycinea str. B076]
gi|320323955|gb|EFW80039.1| DNA-3-methyladenine glycosylase 1 [Pseudomonas syringae pv.
glycinea str. B076]
Length = 204
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 56/168 (33%), Positives = 95/168 (56%), Gaps = 1/168 (0%)
Query: 97 SSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNILPDAVLAVSPQQLREIGVSY 156
+++ PF +L K++ YQQL KA ++ R ALF A++ + Q LR G S
Sbjct: 25 AAQDPFQALIKAVAYQQLHAKAGDAMVMRLRALFPDATFPAAQALIDLDEQTLRSCGFSA 84
Query: 157 RKASYLRDLAEKYTDGILSDESI-VEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDV 215
K ++ +A DG++ D S + M + + + L + G+G W+V M +I+ L + DV
Sbjct: 85 SKCRAIKAIAAARVDGLVPDVSAALAMSNEALVERLIQLPGVGRWTVEMMLIYGLGQMDV 144
Query: 216 LPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSWYMWRL 263
+P D GV +G + LY L+ PG +M + E++ PYR++ +WY+WR+
Sbjct: 145 MPASDYGVCEGYRRLYALELKPGHREMARIGERFGPYRTIAAWYLWRV 192
>gi|414342198|ref|YP_006983719.1| DNA-3-methyladenine glycosylase [Gluconobacter oxydans H24]
gi|411027533|gb|AFW00788.1| DNA-3-methyladenine glycosylase [Gluconobacter oxydans H24]
Length = 216
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 59/184 (32%), Positives = 104/184 (56%), Gaps = 6/184 (3%)
Query: 96 ESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNG--EDNI--LPDAVLAVSPQQLRE 151
+ + P+ +L ++I QQL AA+ I+ R L + ED +P+A+LA + LR
Sbjct: 30 DDGQEPYDALLRAIAGQQLHGAAARRIFGRLCLLGHASSEDGPPPVPEALLAFPEETLRA 89
Query: 152 IGVSYRKASYLRDLAEKYTDGILSDESIVE-MDDVTMFKMLTSVKGIGAWSVHMFMIFSL 210
G+S K + +R +A+ +G++ E +DD + + L +++G+G W+V M ++F+L
Sbjct: 90 CGLSASKQAAMRGVAQARLEGLVPTRLEAERLDDEDLIQRLITLRGVGRWTVEMILMFTL 149
Query: 211 HKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSWYMWRLM-EAKGV 269
+PDV+PV D GVR+G + + L P ++ ++ P+RS +WY WR+ E K
Sbjct: 150 GRPDVMPVDDFGVREGWRRIKRLDTAPRPKDLKTETLRFSPHRSALAWYCWRVAEEGKKT 209
Query: 270 LPNV 273
+PN
Sbjct: 210 VPNT 213
>gi|422674393|ref|ZP_16733747.1| DNA-3-methyladenine glycosylase II [Pseudomonas syringae pv. aceris
str. M302273]
gi|330972121|gb|EGH72187.1| DNA-3-methyladenine glycosylase II [Pseudomonas syringae pv. aceris
str. M302273]
Length = 221
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 105/195 (53%), Gaps = 3/195 (1%)
Query: 72 ALRHLRDKDPLLATLIDAHRPPT--FESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVAL 129
A+ LR DP +LID P +++ PF +L K++ YQQL +A ++ R +L
Sbjct: 15 AVAALRSSDPQWQSLIDQVGPCLHPVSAAQDPFQALVKAVAYQQLHARAGDAMVMRLRSL 74
Query: 130 FNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESI-VEMDDVTMF 188
F A++ + Q LR G S K ++ +A DG++ + S + M + +
Sbjct: 75 FPEVSFPSAPALVELDDQALRSCGFSASKCRAIKAIAAARLDGLVPEVSAALAMGNEALV 134
Query: 189 KMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEK 248
+ L + G+G W+V M +I+ L + DV+P D GV +G + LY L+ P +M + E+
Sbjct: 135 ERLIQLPGVGRWTVEMMLIYGLGQLDVMPASDFGVCEGYRRLYALQLKPSHRQMARLAER 194
Query: 249 WKPYRSVGSWYMWRL 263
+ PYR++ +WY+WR+
Sbjct: 195 FAPYRTIAAWYLWRV 209
>gi|71734928|ref|YP_275445.1| DNA-3-methyladenine glycosylase 1 [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|71555481|gb|AAZ34692.1| DNA-3-methyladenine glycosylase 1 [Pseudomonas syringae pv.
phaseolicola 1448A]
Length = 204
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 56/168 (33%), Positives = 94/168 (55%), Gaps = 1/168 (0%)
Query: 97 SSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNILPDAVLAVSPQQLREIGVSY 156
+++ PF +L K++ YQQL KA ++ R ALF A++ + Q LR G S
Sbjct: 25 AAQDPFQALIKAVAYQQLHAKAGDAMVMRLRALFPDATFPAAQALIDLDEQTLRSCGFSA 84
Query: 157 RKASYLRDLAEKYTDGILSDESI-VEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDV 215
K ++ +A DG+ D S + M + + + L + G+G W+V M +I+ L + DV
Sbjct: 85 SKCRAIKAIAAARVDGLFPDVSAALAMSNEALVERLIQLPGVGRWTVEMMLIYGLGQMDV 144
Query: 216 LPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSWYMWRL 263
+P D GV +G + LY L+ PG +M + E++ PYR++ +WY+WR+
Sbjct: 145 MPASDYGVCEGYRRLYALELKPGHREMARIGERFGPYRTIAAWYLWRV 192
>gi|289625148|ref|ZP_06458102.1| DNA-3-methyladenine glycosylase 1 [Pseudomonas syringae pv. aesculi
str. NCPPB 3681]
gi|289649457|ref|ZP_06480800.1| DNA-3-methyladenine glycosylase 1 [Pseudomonas syringae pv. aesculi
str. 2250]
gi|422584263|ref|ZP_16659375.1| DNA-3-methyladenine glycosylase 1 [Pseudomonas syringae pv. aesculi
str. 0893_23]
gi|330869082|gb|EGH03791.1| DNA-3-methyladenine glycosylase 1 [Pseudomonas syringae pv. aesculi
str. 0893_23]
Length = 204
Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 56/168 (33%), Positives = 95/168 (56%), Gaps = 1/168 (0%)
Query: 97 SSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNILPDAVLAVSPQQLREIGVSY 156
+++ PF +L K++ YQQL KA ++ R ALF A++ + Q LR G S
Sbjct: 25 AAQDPFQALIKAVAYQQLHAKAGDAMVMRLRALFPDATFPAAQALIDLDEQTLRSCGFSA 84
Query: 157 RKASYLRDLAEKYTDGILSDESI-VEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDV 215
K ++ +A DG++ D S + M + + + L + G+G W+V M +I+ L + DV
Sbjct: 85 SKCRAIKAIAAARVDGLVPDVSAALAMSNEALVERLIQLPGVGRWTVEMMLIYGLGQMDV 144
Query: 216 LPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSWYMWRL 263
+P D GV +G + LY L+ PG +M + E++ PYR++ +WY+WR+
Sbjct: 145 IPASDYGVCEGYRRLYALELKPGHREMARIGERFGPYRTIAAWYLWRV 192
>gi|55980298|ref|YP_143595.1| DNA-3-methyladenine glycosidase [Thermus thermophilus HB8]
gi|55771711|dbj|BAD70152.1| DNA-3-methyladenine glycosidase [Thermus thermophilus HB8]
Length = 185
Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 63/165 (38%), Positives = 95/165 (57%), Gaps = 10/165 (6%)
Query: 98 SRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNILPDAVLAVSPQQLREIGVSYR 157
R PF LA+S++ QQL+ +AA + R L P+A L LR+ G+S
Sbjct: 26 QRPPFRVLAESVVAQQLSTRAAARLAERLFRLVPPT----PEAFLEAPLDLLRQAGLSRA 81
Query: 158 KASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLP 217
KA L+DLA K +G+L + + ++D + + LT V+G+G W+ MF++F L +PDV P
Sbjct: 82 KALALKDLAAKAEEGLL--DGLDRLEDEAVVERLTRVRGVGLWTAEMFLMFGLGRPDVWP 139
Query: 218 VGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSWYMWR 262
V DLG+R+ L+G+ P AL E ++PYRS +WY+WR
Sbjct: 140 VRDLGLRRAAARLFGVA--PEALPA--FGEAFRPYRSHLAWYLWR 180
>gi|89092661|ref|ZP_01165614.1| DNA-3-methyladenine glycosylase II, putative [Neptuniibacter
caesariensis]
gi|89083173|gb|EAR62392.1| DNA-3-methyladenine glycosylase II, putative [Oceanospirillum sp.
MED92]
Length = 202
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 58/162 (35%), Positives = 89/162 (54%), Gaps = 11/162 (6%)
Query: 104 SLAKSILYQQLAYKAAKSIYTRFVALFNGEDNILPD----AVLAVSPQQLREIGVSYRKA 159
+L I+ QQL+ +AA SI + N+LPD ++L P+QLR G+S RK
Sbjct: 41 ALVSIIISQQLSTEAAASIMAKV-------KNLLPDISANSILKTPPEQLRAAGLSRRKI 93
Query: 160 SYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVG 219
Y+ LAE L E++ +M D +T ++G+G WS ++++FSL + D+ P
Sbjct: 94 EYVCALAEAIKTNRLDLEALKQMPDSEAINHITQLRGMGRWSAEIYLMFSLQRQDIFPAD 153
Query: 220 DLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSWYMW 261
DL + LQ L GL+E P A + + E W P+ SVGS ++W
Sbjct: 154 DLAIVIALQKLKGLEERPSAKEARVITEHWSPWLSVGSLFLW 195
>gi|317127542|ref|YP_004093824.1| HhH-GPD family protein [Bacillus cellulosilyticus DSM 2522]
gi|315472490|gb|ADU29093.1| HhH-GPD family protein [Bacillus cellulosilyticus DSM 2522]
Length = 288
Score = 107 bits (267), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 59/189 (31%), Positives = 98/189 (51%), Gaps = 5/189 (2%)
Query: 83 LATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNIL----- 137
LA L R F + + L K+I++QQL A + RF+ + + +
Sbjct: 100 LAALFQELRGTPFVCDFTLYGCLMKTIIHQQLNMTFAYELTKRFITTYGFKKKGVWFYPT 159
Query: 138 PDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGI 197
D V ++S +LRE+ S RKA Y+ D ++ +G L+ E++ D + L ++GI
Sbjct: 160 ADRVASLSVAELRELQFSQRKAEYVIDTSKLIAEGNLNLEALKNFSDEEVMDKLVRIRGI 219
Query: 198 GAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGS 257
G W+ F++F L + D+ PV D+G++ G++ Y L + P KM E+ WKPYR+ S
Sbjct: 220 GRWTAECFLMFGLGRLDLFPVQDIGIQNGIKKYYQLDKKPEKEKMLEMSSHWKPYRTYAS 279
Query: 258 WYMWRLMEA 266
Y+W +E
Sbjct: 280 LYLWDYLET 288
>gi|404416250|ref|ZP_10998073.1| DNA-3-methyladenine glycosidase [Staphylococcus arlettae CVD059]
gi|403491330|gb|EJY96852.1| DNA-3-methyladenine glycosidase [Staphylococcus arlettae CVD059]
Length = 216
Score = 107 bits (267), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 105/190 (55%), Gaps = 2/190 (1%)
Query: 72 ALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFN 131
++ L +D LA LI P TF SP S+ +SI+ QQ+ K A++I+ R N
Sbjct: 13 CIKQLITQDAQLAKLIKHIGPITFPKRPSPLKSIIRSIIGQQITVKLAQTIFQRLTETVN 72
Query: 132 GEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKML 191
+ +I ++ +S +L+E+G+S K + L E G + + + + + + + L
Sbjct: 73 DDWSI--ASLSKLSATKLQELGLSRAKTQCIIALLEHVQAGNIDFQKLPYLSNTAVTRNL 130
Query: 192 TSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKP 251
T VKGIG W+ +++IF+LH+ D+LPV D+G+++ Q LY A +++ ++W
Sbjct: 131 TQVKGIGQWTAEIYLIFTLHRIDILPVKDVGLQRAAQWLYQPTNTTKAETLKQCNQRWTG 190
Query: 252 YRSVGSWYMW 261
+++G+ Y+W
Sbjct: 191 CQTIGALYLW 200
>gi|422596124|ref|ZP_16670408.1| DNA-3-methyladenine glycosylase 1 [Pseudomonas syringae pv.
lachrymans str. M301315]
gi|330986425|gb|EGH84528.1| DNA-3-methyladenine glycosylase 1 [Pseudomonas syringae pv.
lachrymans str. M301315]
Length = 204
Score = 107 bits (267), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 56/168 (33%), Positives = 95/168 (56%), Gaps = 1/168 (0%)
Query: 97 SSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNILPDAVLAVSPQQLREIGVSY 156
+++ PF +L K++ YQQL KA ++ R ALF A++ + Q LR G S
Sbjct: 25 AAQDPFQALIKAVAYQQLHAKAGDAMVMRLRALFPDATFPAAQALIDLDEQTLRSCGFSA 84
Query: 157 RKASYLRDLAEKYTDGILSDESI-VEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDV 215
K ++ +A DG++ D S + M + + + L + G+G W+V M +I+ L + DV
Sbjct: 85 SKCRAIKAIAAARVDGLVPDVSAALAMSNEALVERLIQLPGVGRWTVEMMLIYGLGQMDV 144
Query: 216 LPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSWYMWRL 263
+P D GV +G + LY L+ PG +M + E++ PYR++ +WY+WR+
Sbjct: 145 MPASDYGVCEGYRRLYALELKPGHREMARMGERFGPYRTIAAWYLWRV 192
>gi|422641462|ref|ZP_16704885.1| DNA-3-methyladenine glycosylase II [Pseudomonas syringae Cit 7]
gi|330953849|gb|EGH54109.1| DNA-3-methyladenine glycosylase II [Pseudomonas syringae Cit 7]
Length = 221
Score = 107 bits (266), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 105/195 (53%), Gaps = 3/195 (1%)
Query: 72 ALRHLRDKDPLLATLIDAHRPPT--FESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVAL 129
A+ LR DP +LI P +++ PF +L K++ YQQL +A ++ R AL
Sbjct: 15 AVAALRSIDPQWQSLIYQVGPCLHPVSAAQDPFQALVKAVAYQQLHARAGDAMVMRLRAL 74
Query: 130 FNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESI-VEMDDVTMF 188
F + A++ + Q LR G S K ++ +A DG++ + S + M + +
Sbjct: 75 FVDDSFPGAQALVELDDQALRSCGFSASKCRAIKAIAAARVDGLVPEVSAALAMGNEALV 134
Query: 189 KMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEK 248
+ L + G+G W+V M +I+ L + DV+P D GV +G + LY L+ P +M + E+
Sbjct: 135 ERLIQLPGVGRWTVEMMLIYGLGQLDVMPASDFGVCEGYRRLYALELKPSHRQMARLAER 194
Query: 249 WKPYRSVGSWYMWRL 263
+ PYR++ +WY+WR+
Sbjct: 195 FAPYRTIAAWYLWRV 209
>gi|52079265|ref|YP_078056.1| DNA glycosylase [Bacillus licheniformis DSM 13 = ATCC 14580]
gi|319646953|ref|ZP_08001181.1| YfjP protein [Bacillus sp. BT1B_CT2]
gi|404488131|ref|YP_006712237.1| DNA-glycosylase YfjP [Bacillus licheniformis DSM 13 = ATCC 14580]
gi|423681226|ref|ZP_17656065.1| DNA glycosylase [Bacillus licheniformis WX-02]
gi|52002476|gb|AAU22418.1| putative DNA glycosylase [Bacillus licheniformis DSM 13 = ATCC
14580]
gi|52347132|gb|AAU39766.1| putative DNA-glycosylase YfjP [Bacillus licheniformis DSM 13 = ATCC
14580]
gi|317391012|gb|EFV71811.1| YfjP protein [Bacillus sp. BT1B_CT2]
gi|383438000|gb|EID45775.1| DNA glycosylase [Bacillus licheniformis WX-02]
Length = 287
Score = 107 bits (266), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 93/169 (55%), Gaps = 5/169 (2%)
Query: 102 FLSLAKSILYQQLAYKAAKSIYTRFVALFNGE-DNI----LPDAVLAVSPQQLREIGVSY 156
+ L K I++QQL A ++ RFV F + D + LP+ + + LRE+ S
Sbjct: 119 YHCLMKCIIHQQLNLSFAYTLTERFVHTFGEQKDGVWFYPLPETIAQLDYNDLRELQFSM 178
Query: 157 RKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVL 216
RKA Y+ D + DG L + + ++ D + + L ++GIG W+V ++F L +P++
Sbjct: 179 RKAEYVIDTSRMIADGRLDLDELDQLSDEDIMEKLVKIRGIGPWTVQNVLLFGLGRPNLF 238
Query: 217 PVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSWYMWRLME 265
P D+G++ ++ +GL + P +M E+ ++W PY S S Y+WR +E
Sbjct: 239 PAADIGIQNAIKRHFGLNDKPTKEQMLEMSKEWHPYLSYASLYLWRSIE 287
>gi|440723952|ref|ZP_20904305.1| DNA-3-methyladenine glycosylase II [Pseudomonas syringae BRIP34876]
gi|440725426|ref|ZP_20905695.1| DNA-3-methyladenine glycosylase II [Pseudomonas syringae BRIP34881]
gi|440358842|gb|ELP96179.1| DNA-3-methyladenine glycosylase II [Pseudomonas syringae BRIP34876]
gi|440368889|gb|ELQ05910.1| DNA-3-methyladenine glycosylase II [Pseudomonas syringae BRIP34881]
Length = 280
Score = 107 bits (266), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 110/203 (54%), Gaps = 14/203 (6%)
Query: 72 ALRHLRDKDPLLATLIDAHRPPTFE---SSRSPFLSLAKSILYQQLAYKAAKSIYTRFVA 128
A+ LR D +LID H P +++ PF +L K++ YQQL +A ++ R A
Sbjct: 69 AVAALRSIDVQWQSLID-HVGPCLHPVSAAQDPFQALVKAVAYQQLHARAGDAMVRRLRA 127
Query: 129 LFNGEDNILPD-------AVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESI-V 180
LF D+ LP+ A++ + Q LR G S K ++ +A DG++ + S +
Sbjct: 128 LF--LDDSLPEVSFPGAQALVDLDDQALRSCGFSASKCRAIKAIAAARLDGLVPEVSAAL 185
Query: 181 EMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGAL 240
M + + + L + G+G W+V M +I+ L + DV+P D GV +G + LY L+ P
Sbjct: 186 AMGNEALVERLIQLPGVGRWTVEMMLIYGLGQLDVMPASDFGVCEGYRRLYALQLKPSHR 245
Query: 241 KMEEVCEKWKPYRSVGSWYMWRL 263
+M + E++ PYR++ +WY+WR+
Sbjct: 246 QMARLAERFAPYRTIAAWYLWRV 268
>gi|345005167|ref|YP_004808020.1| HhH-GPD family protein [halophilic archaeon DL31]
gi|344320793|gb|AEN05647.1| HhH-GPD family protein [halophilic archaeon DL31]
Length = 217
Score = 107 bits (266), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 65/196 (33%), Positives = 100/196 (51%), Gaps = 10/196 (5%)
Query: 75 HLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGED 134
HLR +D L L+ + F L SI+ QQ++ +A + R LF +
Sbjct: 15 HLR-EDRYLGPLVAEFGELCLDPEDDAFRRLVASIISQQVSTASAAATRER---LFEAVE 70
Query: 135 NILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSV 194
P+ + A L+E G+S +K Y+ +A+++ + + ES M + + LT +
Sbjct: 71 PT-PEGIRAADEATLKEAGLSRQKTRYVNAVADRFHEEGWTRESFEPMSNDEVRAALTDI 129
Query: 195 KGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEV-----CEKW 249
G+G W+ MF++F+L +PDV PVGDLGVRKGLQ L + A M E+W
Sbjct: 130 TGVGEWTADMFLLFALGRPDVFPVGDLGVRKGLQTLLSPYDDHDAENMTRAEMRVFAERW 189
Query: 250 KPYRSVGSWYMWRLME 265
KP RS + Y+WR+ E
Sbjct: 190 KPARSYAALYLWRVNE 205
>gi|451347874|ref|YP_007446505.1| DNA-3-methyladenine glycosylase II [Bacillus amyloliquefaciens
IT-45]
gi|449851632|gb|AGF28624.1| DNA-3-methyladenine glycosylase II [Bacillus amyloliquefaciens
IT-45]
Length = 287
Score = 107 bits (266), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 98/188 (52%), Gaps = 5/188 (2%)
Query: 83 LATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNIL----- 137
L+ L + H + L K I++QQL A ++ RFV F + + +
Sbjct: 100 LSALFEEHAGTPLVLEYDVYNCLMKCIIHQQLNLSFAFTLTERFVHAFGEQKDGVWCYPE 159
Query: 138 PDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGI 197
P + A+ Q+LRE+ S RKA Y D++ DG L+ + + D + K L +++GI
Sbjct: 160 PKTIAALEYQELRELQFSMRKAEYAIDISRMIADGALNLAELTHLSDEDIMKKLITIRGI 219
Query: 198 GAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGS 257
G W+V ++F L +P++ P+ D+G++ ++ + L++ P M +V +W PY S S
Sbjct: 220 GPWTVQNVLMFGLGRPNLFPLADIGLQNAIKRRFALEDKPSKDVMLQVSSEWAPYLSYAS 279
Query: 258 WYMWRLME 265
Y+WR +E
Sbjct: 280 LYLWRSIE 287
>gi|301630359|ref|XP_002944289.1| PREDICTED: acetyl-coenzyme A carboxylase carboxyl transferase
subunit alpha-like, partial [Xenopus (Silurana)
tropicalis]
Length = 419
Score = 107 bits (266), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 58/169 (34%), Positives = 94/169 (55%), Gaps = 3/169 (1%)
Query: 86 LIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNILPDAVLAVS 145
LI ++ F +LA+SI+ QQ++ KAA++++ RF L N+ P++VL +
Sbjct: 4 LIPQFADAALQTRGDAFGTLARSIVGQQISVKAAQTVWDRFALL---PANMEPESVLKLK 60
Query: 146 PQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIGAWSVHMF 205
+R G+S RK YL DLA + +G L + MDD T+ L +++G+G W+ MF
Sbjct: 61 VDDMRAAGLSARKVDYLVDLALHFANGKLHVQDWQGMDDETIIAELVAIRGVGRWTAEMF 120
Query: 206 MIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRS 254
+IF L +P+VLP+ D+G+ G+ LY + EV WKP+ +
Sbjct: 121 LIFHLMRPNVLPLDDVGLINGISRLYFSGDPVSRSDAREVAAAWKPWST 169
>gi|334131394|ref|ZP_08505158.1| DNA-3-methyladenine glycosylase 1 [Methyloversatilis universalis
FAM5]
gi|333443561|gb|EGK71524.1| DNA-3-methyladenine glycosylase 1 [Methyloversatilis universalis
FAM5]
Length = 207
Score = 107 bits (266), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 68/196 (34%), Positives = 101/196 (51%), Gaps = 5/196 (2%)
Query: 72 ALRHLRDKDPLLATLIDAHRPPTFESS---RSPFLSLAKSILYQQLAYKAAKSIYTRFVA 128
A R L DP A L+ A P + R P+ +L +++ YQQL+ +A ++ RF+A
Sbjct: 9 AERFLAALDPDWAALV-ATVGPCLHAPKPLREPWQALLRAVAYQQLSVRAGDTMIARFLA 67
Query: 129 LFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGIL-SDESIVEMDDVTM 187
L+ P V + LR G S RKA LR +A DG + S + + D +
Sbjct: 68 LYGDVAFPSPQQVCDTPVEALRACGFSGRKADTLRAIAAAALDGTVPSLAEALTLGDDAL 127
Query: 188 FKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCE 247
LT + GIG W+V M +I++L + D+LP DLGVR G + L L P +M +
Sbjct: 128 VARLTPLHGIGRWTVDMMLIYTLGRTDLLPADDLGVRDGYRRLRRLDRPPTPRQMSALAL 187
Query: 248 KWKPYRSVGSWYMWRL 263
W P+R+ SWY+WR+
Sbjct: 188 PWSPHRTAASWYLWRV 203
>gi|456358955|dbj|BAM93329.1| putative DNA-3-methyladenine glycosylase II [Sphingomonas sp. KSM1]
Length = 209
Score = 106 bits (265), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 56/160 (35%), Positives = 92/160 (57%), Gaps = 3/160 (1%)
Query: 102 FLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNILPDAVLAVSPQQLREIGVSYRKASY 161
+ +L ++I+ QQ++ AA SI+ + A I P+A+ S + LR G+S +KASY
Sbjct: 43 YETLLRTIVGQQVSVAAAASIWRKLEAAVG--TGIAPEALTDASDEALRGAGLSRQKASY 100
Query: 162 LRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDL 221
+ LAE+ T G L D + DD + LT++KGIG WS ++++F+ +PD+ P GDL
Sbjct: 101 AKSLAEEVTSGRL-DLHALPADDEDAIQALTAIKGIGRWSAEIYLLFAEGRPDMWPAGDL 159
Query: 222 GVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSWYMW 261
V+ L + GL+E P + E W+P+R + ++W
Sbjct: 160 AVQIALGRIKGLEERPSEKLTRTLAEGWRPHRGAAAIFLW 199
>gi|46199956|ref|YP_005623.1| DNA-3-methyladenine glycosylase II [Thermus thermophilus HB27]
gi|46197583|gb|AAS81996.1| DNA-3-methyladenine glycosylase II [Thermus thermophilus HB27]
Length = 185
Score = 106 bits (265), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 63/165 (38%), Positives = 94/165 (56%), Gaps = 10/165 (6%)
Query: 98 SRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNILPDAVLAVSPQQLREIGVSYR 157
R PF LA+S++ QQL+ +AA + R L P A L LR+ G+S
Sbjct: 26 QRPPFRVLAESVVAQQLSTRAAARLAERLFRLVPPT----PKAFLEAPLDLLRQAGLSRA 81
Query: 158 KASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLP 217
KA L+DLA K +G+L + + ++D + + LT V+G+G W+ MF++F L +PDV P
Sbjct: 82 KALALKDLAAKAEEGLL--DGLDRLEDEAVVERLTRVRGVGLWTAEMFLMFGLGRPDVWP 139
Query: 218 VGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSWYMWR 262
V DLG+R+ L+G+ P AL E ++PYRS +WY+WR
Sbjct: 140 VRDLGLRRAAARLFGVA--PEALPA--FGEAFRPYRSHLAWYLWR 180
>gi|386359517|ref|YP_006057762.1| HhH-GPD superfamily base excision DNA repair protein [Thermus
thermophilus JL-18]
gi|383508544|gb|AFH37976.1| HhH-GPD superfamily base excision DNA repair protein [Thermus
thermophilus JL-18]
Length = 185
Score = 106 bits (265), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 63/165 (38%), Positives = 94/165 (56%), Gaps = 10/165 (6%)
Query: 98 SRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNILPDAVLAVSPQQLREIGVSYR 157
R PF LA+S++ QQL+ +AA + R L P A L LR+ G+S
Sbjct: 26 QRPPFRVLAESVVAQQLSTRAAARLTERLFRLVPPT----PKAFLEAPLDLLRQAGLSRA 81
Query: 158 KASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLP 217
KA L+DLA K +G+L+ + ++D + + LT V+G+G W+ MF++F L +PDV P
Sbjct: 82 KALALKDLAAKAEEGLLA--GLDRLEDEAVVERLTRVRGVGPWTAEMFLMFGLGRPDVWP 139
Query: 218 VGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSWYMWR 262
V DLG+R+ L+G+ P AL E ++PYRS +WY+WR
Sbjct: 140 VRDLGLRRAAARLFGVA--PEALPA--FGEAFRPYRSHLAWYLWR 180
>gi|238751783|ref|ZP_04613271.1| Methylated-DNA--protein-cysteine methyltransferase [Yersinia rohdei
ATCC 43380]
gi|238710054|gb|EEQ02284.1| Methylated-DNA--protein-cysteine methyltransferase [Yersinia rohdei
ATCC 43380]
Length = 207
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 109/199 (54%), Gaps = 10/199 (5%)
Query: 67 GEVDIALRHLRDKDPLLATLIDAHRPPTFESSRSP--FLSLAKSILYQQLAYKAAKSIYT 124
GE +I HL+ +D +A I+ R SP F +L ++I+ QQ++ KAA+++ +
Sbjct: 11 GETEI--NHLKKRDKKMAAAIE--RLGMIARPLSPDLFAALIRNIVDQQISVKAAQTVNS 66
Query: 125 RFVALFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDD 184
R V L + P + A + ++ G++ RKA Y++ A+ +G L +I ++ D
Sbjct: 67 RLVTLLG---TVTPMTIAAAPIEAIQACGMTMRKAGYIKGAADAALNGSLDLLAISQLPD 123
Query: 185 VTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEE 244
+ L+S+ G+G W+ M +I SL +PDVL GDL +R+G+ LY K LP + E+
Sbjct: 124 NEVITQLSSLNGVGIWTAEMLLISSLSRPDVLSWGDLAIRRGMMNLYRHKTLPRE-RFEK 182
Query: 245 VCEKWKPYRSVGSWYMWRL 263
++ PY + S Y+W L
Sbjct: 183 YRRRYAPYGTTASLYLWAL 201
>gi|434393336|ref|YP_007128283.1| HhH-GPD family protein [Gloeocapsa sp. PCC 7428]
gi|428265177|gb|AFZ31123.1| HhH-GPD family protein [Gloeocapsa sp. PCC 7428]
Length = 206
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/195 (33%), Positives = 109/195 (55%), Gaps = 10/195 (5%)
Query: 77 RDKDPLLATLIDAH-RPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDN 135
RD+D LA++++ PP +E + F+ L ++I+ QQL+ +AK+I+TR L
Sbjct: 19 RDRD--LASIVEKWGHPPNWERE-TGFVGLVRTIIGQQLSIASAKAIFTRLSQLVP---- 71
Query: 136 ILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVK 195
+ P L + QL+ G+S RK Y R+LA ++ + + +DD ++ L +K
Sbjct: 72 LTPANFLQLDDAQLQAAGLSQRKILYCRELARAIATNVIDLDELALLDDASVRSQLRQIK 131
Query: 196 GIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSV 255
GIG W+V ++++ L +PD P GDL + Q L L + P +++E V EKWKP+R+V
Sbjct: 132 GIGDWTVDIYLLMCLQRPDAFPSGDLALAIAYQKLKRLPKRPTPVELEAVSEKWKPWRAV 191
Query: 256 GSWYMWR--LMEAKG 268
+ +W LM+ K
Sbjct: 192 AARILWHYYLMQNKA 206
>gi|336115084|ref|YP_004569851.1| DNA-3-methyladenine glycosylase II [Bacillus coagulans 2-6]
gi|335368514|gb|AEH54465.1| DNA-3-methyladenine glycosylase II [Bacillus coagulans 2-6]
Length = 287
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/235 (30%), Positives = 113/235 (48%), Gaps = 7/235 (2%)
Query: 38 TKIAEIPVATAISTNSDNSPKIFKPL--TFKGEVDIALRHLRDKDPLLATLIDAHRPPTF 95
T E P N D + + K + F+ E D+A L L HR F
Sbjct: 53 TGTTEAPAFLIKGENPDTAEIVEKRIFHLFQWEKDLAGITNHFTGTALEPLFKEHRGTPF 112
Query: 96 ESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGE-DNI----LPDAVLAVSPQQLR 150
SP+ L K I++QQL K A ++ RFV F + D + P+ A+ LR
Sbjct: 113 VLDFSPYACLVKCIIHQQLNMKFAHTLTERFVYHFGFQKDGVWFYPFPEKTAALQVADLR 172
Query: 151 EIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSL 210
+ S RKA Y+ L++ G L ++ + D + K L ++GIG W+V F++F L
Sbjct: 173 ALQFSERKAEYVIGLSKLVVSGELDLAALEKEPDEEILKTLVKIRGIGPWTVQNFLMFGL 232
Query: 211 HKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSWYMWRLME 265
+ + P D+G++K L+ L+ L++ P +M+ + W+PY S S Y+WR +E
Sbjct: 233 GRLNHFPKADIGIQKALKKLFQLEKKPTYEEMDAYAKDWEPYLSYASLYLWRSIE 287
>gi|336416646|ref|ZP_08596979.1| hypothetical protein HMPREF1017_04087 [Bacteroides ovatus
3_8_47FAA]
gi|335937703|gb|EGM99601.1| hypothetical protein HMPREF1017_04087 [Bacteroides ovatus
3_8_47FAA]
Length = 223
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 112/207 (54%), Gaps = 8/207 (3%)
Query: 67 GEVDIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRF 126
GE +I HL+ D LA +ID + F +L SI+ QQ++ KA ++I+ R
Sbjct: 8 GETEI--EHLKKVDKRLAEVIDKVGRVKRKIIPDLFSALVNSIIGQQISTKAHRTIWERM 65
Query: 127 VALFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVT 186
N +I P V +S +L++ G++++KA Y++ + K G + + + M D
Sbjct: 66 KQRLN---DISPTVVNDLSLDELQKFGITFKKAVYIQSMTRKIVSGEFNIQELETMSDEE 122
Query: 187 MFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVC 246
+ L+ + GIG W+ M MI S+ +P++L GDL + +GL+++Y + + A K E
Sbjct: 123 ICTKLSELDGIGTWTAEMLMIHSMQRPNILSYGDLAIIRGLRMIYHHQTIDKA-KFERYK 181
Query: 247 EKWKPYRSVGSWYMWRLMEAKGVLPNV 273
+++ PY S+ S Y+W + A G + N+
Sbjct: 182 KRYSPYASIASLYIWAV--AGGAIENM 206
>gi|381191527|ref|ZP_09899037.1| DNA-3-methyladenine glycosylase II [Thermus sp. RL]
gi|384430255|ref|YP_005639615.1| HhH-GPD family protein [Thermus thermophilus SG0.5JP17-16]
gi|333965723|gb|AEG32488.1| HhH-GPD family protein [Thermus thermophilus SG0.5JP17-16]
gi|380450887|gb|EIA38501.1| DNA-3-methyladenine glycosylase II [Thermus sp. RL]
Length = 185
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/165 (38%), Positives = 94/165 (56%), Gaps = 10/165 (6%)
Query: 98 SRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNILPDAVLAVSPQQLREIGVSYR 157
R PF LA+S++ QQL+ +AA + R L P A L LR+ G+S
Sbjct: 26 QRPPFRVLAESVVAQQLSTQAAARLAERLFRLVPPT----PKAFLEAPLDLLRQAGLSRA 81
Query: 158 KASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLP 217
KA L+DLA K +G+L + + ++D + + LT V+G+G W+ MF++F L +PDV P
Sbjct: 82 KALALKDLAAKAEEGLL--DGLDRLEDEAVVERLTRVRGVGLWTAEMFLMFGLGRPDVWP 139
Query: 218 VGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSWYMWR 262
V DLG+R+ L+G+ P AL E ++PYRS +WY+WR
Sbjct: 140 VRDLGLRRAAARLFGVA--PEALPA--FGEAFRPYRSHLAWYLWR 180
>gi|87199138|ref|YP_496395.1| HhH-GPD [Novosphingobium aromaticivorans DSM 12444]
gi|87134819|gb|ABD25561.1| HhH-GPD [Novosphingobium aromaticivorans DSM 12444]
Length = 205
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/190 (33%), Positives = 99/190 (52%), Gaps = 3/190 (1%)
Query: 72 ALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFN 131
L H+ + P LA I+ P + + +L ++I+ QQ++ AA S++ + AL
Sbjct: 11 GLDHIAARSPALADAIERVGYPEPRIRPTGYRTLLRTIVGQQVSVSAAASVWNKLEALL- 69
Query: 132 GEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKML 191
GED + P +LA LR G+S +K Y R L E G L +S+ + DD L
Sbjct: 70 GED-LPPHDLLAADFDALRACGLSRQKQGYARSLCELVVSGELDFDSLPQ-DDEEAIAEL 127
Query: 192 TSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKP 251
+KGIG WS ++++F+ +PD+ P GDL V+ GL L GL E P + E+W+P
Sbjct: 128 VKIKGIGRWSAEIYLLFAEGRPDIWPAGDLAVQVGLGRLLGLPERPSEKDTRVLAEQWRP 187
Query: 252 YRSVGSWYMW 261
+R + + W
Sbjct: 188 HRGAAAIFTW 197
>gi|340914991|gb|EGS18332.1| hypothetical protein CTHT_0063560 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 374
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/240 (30%), Positives = 114/240 (47%), Gaps = 37/240 (15%)
Query: 30 KLTTITPITKIAEIPVATAISTNSDNSPK--IFKPLTFKGEVDIALRHLRDKDPLLATLI 87
++ T +P++ A+ ++ +++ + +P + T + + A+ HL +P L LI
Sbjct: 116 RIITSSPVSSPAKSKLSQSVAPSPTQAPSSTVGAITTTENILQKAVDHLISVEPRLKPLI 175
Query: 88 DAH-----RPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFN----------- 131
D + P F PF +LA SI+ QQ++ AAKSI +F+ALF
Sbjct: 176 DKYPCRLFSPEGFAEQVDPFEALASSIIAQQVSGAAAKSIKAKFIALFKPSNSDGDASQP 235
Query: 132 ---GEDNIL----------------PDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDG 172
ED P V A + LR G+S RKA YL L++ + G
Sbjct: 236 QLWDEDQAQPPSQSQQPFLSRYFPSPAQVAATPLETLRTAGLSQRKAEYLHSLSQAFLSG 295
Query: 173 ILSDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYG 232
LS ++ D + +LTS++GIG W+ MF +F+L + DV GDLGV++GL G
Sbjct: 296 TLSTTTLASAPDEELITLLTSLRGIGRWTAEMFAVFALKRMDVFSTGDLGVQRGLARFMG 355
>gi|402223909|gb|EJU03972.1| DNA glycosylase [Dacryopinax sp. DJM-731 SS1]
Length = 381
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 59/141 (41%), Positives = 86/141 (60%), Gaps = 14/141 (9%)
Query: 101 PFLSLAKSILYQQLAYKAAKSIYTRFVALFNG---EDNILPDAVLA---VSPQQL----- 149
PF +LA SIL QQ+++KAA+SI +F+ LF+ E +P A+ +P QL
Sbjct: 104 PFRTLATSILGQQISWKAARSIVAKFLLLFDPSLPERGDVPPAMHDRPFPTPHQLAGMDI 163
Query: 150 ---REIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIGAWSVHMFM 206
R G+S RKA Y+ DLA + +G LS + + D + + L +V+GIG W+V MF
Sbjct: 164 PTLRSAGLSQRKAEYVIDLATHFANGQLSPSFLAKASDEQLAEHLIAVRGIGRWTVDMFA 223
Query: 207 IFSLHKPDVLPVGDLGVRKGL 227
IFS +PD++P GDLGV++GL
Sbjct: 224 IFSARRPDIMPYGDLGVQRGL 244
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 36/66 (54%), Gaps = 3/66 (4%)
Query: 201 SVHMFMIFSLHKPDVLPVGDLGVR-KGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSWY 259
+VH+ + + PD L V L R G +V G+ P +M+ + E WKPYRS+ WY
Sbjct: 315 AVHVPLGKPVKLPDGLTVSQLKSRLSGKKVQKGMYLTPA--EMDALTEGWKPYRSIAVWY 372
Query: 260 MWRLME 265
MW L E
Sbjct: 373 MWALSE 378
>gi|404486407|ref|ZP_11021598.1| hypothetical protein HMPREF9448_02034 [Barnesiella intestinihominis
YIT 11860]
gi|404336920|gb|EJZ63378.1| hypothetical protein HMPREF9448_02034 [Barnesiella intestinihominis
YIT 11860]
Length = 217
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 113/207 (54%), Gaps = 6/207 (2%)
Query: 73 LRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNG 132
L +L+ +D L+ +ID + F +L SI+ QQ++ KA ++I+ R +
Sbjct: 12 LSYLKQRDKRLSEIIDKVGWVKRRVIPNLFAALVHSIVGQQISTKAHETIWQRIQSSLG- 70
Query: 133 EDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLT 192
I P V++++ ++L+ G+S++K +Y++ A K +G + + D + + L+
Sbjct: 71 --EITPQRVISLTDEELQRFGISFKKVTYIKRAATKILNGEFDIHGLYDKTDEEVIECLS 128
Query: 193 SVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPY 252
+ GIG WS M M+FS+ +PD+L DL +++GL+++Y +++ L E+ ++ PY
Sbjct: 129 KLDGIGTWSAEMLMLFSMQRPDILSYSDLAIQRGLRMVYHHRDITRKL-FEKYRRRYSPY 187
Query: 253 RSVGSWYMWRLMEAKGVLPNVAKAAVT 279
SV S Y+W + A G + + A T
Sbjct: 188 SSVASLYLWAV--AGGAIEGMKDYATT 212
>gi|220904429|ref|YP_002479741.1| HhH-GPD family protein [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
gi|219868728|gb|ACL49063.1| HhH-GPD family protein [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
Length = 235
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 102/186 (54%), Gaps = 4/186 (2%)
Query: 76 LRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDN 135
L+ +DP+LA ++ E + F +L SI+ QQ++ KA +I+ R F
Sbjct: 17 LKSRDPVLAAAMEEIGHIRREVTPDIFNALLNSIVGQQISTKAQATIWKRMREQFC---P 73
Query: 136 ILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVK 195
I P+ + +S + L+ G+S RKA+Y++ + E DG L + + D + L +K
Sbjct: 74 ITPENIGTISAESLQTCGISMRKAAYIKSITEAVLDGSLDLARLPSLTDKEICAQLVQLK 133
Query: 196 GIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSV 255
GIG W+ M MIFS+ +PD+L DL +++GL++LY +++ AL +++ P+ +
Sbjct: 134 GIGVWTAEMIMIFSMQRPDILSWDDLAIQRGLRMLYRHRQITPAL-FARYRKRYSPHATT 192
Query: 256 GSWYMW 261
S Y+W
Sbjct: 193 ASLYLW 198
>gi|384163220|ref|YP_005544599.1| DNA-modified purine glycosidase [Bacillus amyloliquefaciens LL3]
gi|384167388|ref|YP_005548766.1| DNA-modified purine glycosidase [Bacillus amyloliquefaciens XH7]
gi|328910775|gb|AEB62371.1| putative DNA-modified purine glycosidase [Bacillus
amyloliquefaciens LL3]
gi|341826667|gb|AEK87918.1| putative DNA-modified purine glycosidase [Bacillus
amyloliquefaciens XH7]
Length = 310
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 98/188 (52%), Gaps = 5/188 (2%)
Query: 83 LATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNIL----- 137
L+ L + H + L K I++QQL A ++ RFV F + + +
Sbjct: 123 LSALFEEHAGTPLVLEYDVYNCLMKCIIHQQLNLSFAFTLTERFVHAFGEQKDGVWCYPE 182
Query: 138 PDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGI 197
P + A+ Q LRE+ S RKA Y DL+ DG L+ + ++ D + K L +++GI
Sbjct: 183 PKTIAALEYQDLRELQFSMRKAEYAIDLSRMIADGALNLAELPQLSDEDIMKKLITIRGI 242
Query: 198 GAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGS 257
G W+V ++F L +P++ P+ D+G++ ++ + L++ P M +V +W PY S S
Sbjct: 243 GPWTVQNVLMFGLGRPNLFPLADIGLQNAVKRRFALEDKPSKDLMLQVSREWAPYLSYAS 302
Query: 258 WYMWRLME 265
Y+WR +E
Sbjct: 303 LYLWRSIE 310
>gi|308172665|ref|YP_003919370.1| DNA-modified purine glycosidase [Bacillus amyloliquefaciens DSM 7]
gi|384158337|ref|YP_005540410.1| DNA-modified purine glycosidase [Bacillus amyloliquefaciens TA208]
gi|307605529|emb|CBI41900.1| putative DNA-modified purine glycosidase [Bacillus
amyloliquefaciens DSM 7]
gi|328552425|gb|AEB22917.1| DNA-modified purine glycosidase [Bacillus amyloliquefaciens TA208]
Length = 287
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 98/188 (52%), Gaps = 5/188 (2%)
Query: 83 LATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNIL----- 137
L+ L + H + L K I++QQL A ++ RFV F + + +
Sbjct: 100 LSALFEEHAGTPLVLEYDVYNCLMKCIIHQQLNLSFAFTLTERFVHAFGEQKDGVWCYPE 159
Query: 138 PDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGI 197
P + A+ Q LRE+ S RKA Y DL+ DG L+ + ++ D + K L +++GI
Sbjct: 160 PKTIAALEYQDLRELQFSMRKAEYAIDLSRMIADGALNLAELPQLSDEDIMKKLITIRGI 219
Query: 198 GAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGS 257
G W+V ++F L +P++ P+ D+G++ ++ + L++ P M +V +W PY S S
Sbjct: 220 GPWTVQNVLMFGLGRPNLFPLADIGLQNAVKRRFALEDKPSKDLMLQVSREWAPYLSYAS 279
Query: 258 WYMWRLME 265
Y+WR +E
Sbjct: 280 LYLWRSIE 287
>gi|375361484|ref|YP_005129523.1| DNA-3-methyladenine glycosylase II [Bacillus amyloliquefaciens
subsp. plantarum CAU B946]
gi|371567478|emb|CCF04328.1| DNA-3-methyladenine glycosylase II [Bacillus amyloliquefaciens
subsp. plantarum CAU B946]
Length = 287
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 97/188 (51%), Gaps = 5/188 (2%)
Query: 83 LATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNIL----- 137
L+ L + H + L K I++QQL A ++ RFV F + + +
Sbjct: 100 LSALFEEHAGTPLVLEYDVYNCLMKCIIHQQLNLSFAFTLTERFVHAFGEQKDGVWCYPE 159
Query: 138 PDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGI 197
P + A+ Q LRE+ S RKA Y D++ DG L+ + + D + K L +++GI
Sbjct: 160 PKTIAALDYQDLRELQFSMRKAEYAIDISRMIADGALNLAELTHLSDEDIMKKLITIRGI 219
Query: 198 GAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGS 257
G W+V ++F L +P++ P+ D+G++ ++ + L++ P M +V +W PY S S
Sbjct: 220 GPWTVQNVLMFGLGRPNLFPLADIGLQNAIKRRFALEDKPSKDVMLQVSSEWAPYLSYAS 279
Query: 258 WYMWRLME 265
Y+WR +E
Sbjct: 280 LYLWRSIE 287
>gi|255015545|ref|ZP_05287671.1| HhH-GPD family protein [Bacteroides sp. 2_1_7]
gi|410101426|ref|ZP_11296355.1| hypothetical protein HMPREF0999_00127 [Parabacteroides sp. D25]
gi|409240252|gb|EKN33033.1| hypothetical protein HMPREF0999_00127 [Parabacteroides sp. D25]
Length = 222
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 104/189 (55%), Gaps = 4/189 (2%)
Query: 73 LRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNG 132
L +L+ KD LA +ID F +L SI+ QQ++ +A ++I+ + + F
Sbjct: 12 LSYLKSKDKRLAEVIDKVGMVKRRVIPDLFAALVHSIVGQQISTRAHETIWQKLLTHFG- 70
Query: 133 EDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLT 192
I P A+ ++ ++L+ G+++RKA Y++ A K G + + M D + L+
Sbjct: 71 --TITPAAIASIPREELQRFGITFRKADYIQSAARKIISGEFDIKELHGMADAEVCNRLS 128
Query: 193 SVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPY 252
++ GIG W+ M M+ SL +PD+L GDL +++GL++LY +++ L E+ ++ PY
Sbjct: 129 ALDGIGIWTAEMMMLHSLQRPDILSFGDLAMQRGLRMLYHHRKITRKL-FEKYRRRYSPY 187
Query: 253 RSVGSWYMW 261
SV Y+W
Sbjct: 188 GSVACIYLW 196
>gi|422631151|ref|ZP_16696341.1| DNA-3-methyladenine glycosylase II [Pseudomonas syringae pv. pisi
str. 1704B]
gi|330940826|gb|EGH43798.1| DNA-3-methyladenine glycosylase II [Pseudomonas syringae pv. pisi
str. 1704B]
Length = 280
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 107/199 (53%), Gaps = 14/199 (7%)
Query: 76 LRDKDPLLATLIDAHRPPTFE---SSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNG 132
LR D +LID H P +++ PF +L K++ YQQL +A ++ R ALF
Sbjct: 73 LRSIDVQWQSLID-HVGPCLHPVSAAQDPFQALVKAVAYQQLHARAGDAMVRRLRALF-- 129
Query: 133 EDNILPD-------AVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESI-VEMDD 184
D+ LP+ A++ + Q LR G S K ++ +A DG++ + S + M +
Sbjct: 130 LDDSLPEVSFPGAQALVELDDQALRSCGFSASKCRAIKAIAAARLDGLVPEVSAALAMGN 189
Query: 185 VTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEE 244
+ + L + G+G W+V M +I+ L + DV P D GV +G + LY L+ P +M
Sbjct: 190 EALVERLIQLPGVGRWTVEMMLIYGLGQLDVTPASDFGVCEGYRRLYALQLRPSHRQMAR 249
Query: 245 VCEKWKPYRSVGSWYMWRL 263
+ E++ PYR++ +WY+WR+
Sbjct: 250 LAERFAPYRTIAAWYLWRV 268
>gi|421732514|ref|ZP_16171635.1| DNA-3-methyladenine glycosylase II [Bacillus amyloliquefaciens
subsp. plantarum M27]
gi|407073643|gb|EKE46635.1| DNA-3-methyladenine glycosylase II [Bacillus amyloliquefaciens
subsp. plantarum M27]
Length = 287
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 97/188 (51%), Gaps = 5/188 (2%)
Query: 83 LATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNIL----- 137
L+ L + H + L K I++QQL A ++ RFV F + + +
Sbjct: 100 LSALFEEHAGTPLVLEYDVYNCLMKCIIHQQLNLSFAFTLTERFVHAFGEQKDGVWCYPE 159
Query: 138 PDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGI 197
P + A+ Q LRE+ S RKA Y D++ DG L+ + + D + K L +++GI
Sbjct: 160 PKTIAALEYQDLRELQFSMRKAEYAIDISRMIADGALNLAELTHLSDEDIMKKLITIRGI 219
Query: 198 GAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGS 257
G W+V ++F L +P++ P+ D+G++ ++ + L++ P M +V +W PY S S
Sbjct: 220 GPWTVQNVLMFGLGRPNLFPLADIGLQNAIKRRFALEDKPSKDVMLQVSSEWAPYLSYAS 279
Query: 258 WYMWRLME 265
Y+WR +E
Sbjct: 280 LYLWRSIE 287
>gi|395332879|gb|EJF65257.1| hypothetical protein DICSQDRAFT_159443 [Dichomitus squalens
LYAD-421 SS1]
Length = 516
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 55/129 (42%), Positives = 77/129 (59%), Gaps = 19/129 (14%)
Query: 118 AAKSIYTRFVALFN-----------------GEDNILPDA--VLAVSPQQLREIGVSYRK 158
+A++I +FV LF+ + P A V+A LR G+S RK
Sbjct: 211 SARAITHKFVRLFDPSIPEDVSESQYVSPRASRSDFFPSAHQVIAKDVATLRTAGLSGRK 270
Query: 159 ASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPV 218
A Y+ DLA K+ DG LS ++E DD + KMLT+V+GIG W+V MF +FSL +PD+LPV
Sbjct: 271 AEYVLDLAGKFADGTLSTRKLLEADDEELHKMLTAVRGIGTWTVDMFAMFSLRRPDILPV 330
Query: 219 GDLGVRKGL 227
GDLGV++G+
Sbjct: 331 GDLGVQRGM 339
Score = 44.7 bits (104), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 32/57 (56%), Gaps = 9/57 (15%)
Query: 213 PDVLPVGDLGVRKGLQVLYGLKELPGAL----KMEEVCEKWKPYRSVGSWYMWRLME 265
P+ L V + R L G ++ GAL +ME + E W+PYRS+G +YMW L E
Sbjct: 462 PEGLTVAQMKTR-----LTGKNKIKGALLTPMEMEALAESWRPYRSLGVYYMWALSE 513
>gi|404252568|ref|ZP_10956536.1| HhH-GPD family protein [Sphingomonas sp. PAMC 26621]
Length = 207
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 107/191 (56%), Gaps = 5/191 (2%)
Query: 72 ALRHLRDKDPLLATLID-AHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALF 130
A+ L ++P A ++ PP S+R F +L ++I+ QQ++ +A+S Y + +
Sbjct: 11 AMDALAAREPAFAVALERVGYPPPRISARG-FGTLLRTIVGQQVSVTSAQSTYKKLEGIV 69
Query: 131 NGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKM 190
D+ P ++A + +QLR G+S +KASY R L+E T G L E++ E D+ + K
Sbjct: 70 GSLDD--PANIIAATDEQLRAAGLSRQKASYARSLSELVTSGALDLENLPEDDEEAIAK- 126
Query: 191 LTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWK 250
L +VKGIG WS ++++F+ + D+ P GDL V+ + L G + P + E+ E W+
Sbjct: 127 LVAVKGIGRWSAEIYLLFAEGRTDIWPAGDLAVQIEIGRLLGHEARPSEKLVRELAEAWR 186
Query: 251 PYRSVGSWYMW 261
P+R + + W
Sbjct: 187 PHRGAAAIFAW 197
>gi|410092054|ref|ZP_11288596.1| DNA-3-methyladenine glycosylase II [Pseudomonas viridiflava
UASWS0038]
gi|409760620|gb|EKN45749.1| DNA-3-methyladenine glycosylase II [Pseudomonas viridiflava
UASWS0038]
Length = 221
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/198 (32%), Positives = 103/198 (52%), Gaps = 9/198 (4%)
Query: 72 ALRHLRDKDPLLATLIDAHRPPTFE---SSRSPFLSLAKSILYQQLAYKAAKSIYTRFVA 128
A L+ D +LID H P +++ P+ +L K + YQQL +A ++ R A
Sbjct: 14 ATEMLKAVDGRWQSLID-HVGPCLHPVTAAQDPYQALVKGVAYQQLHARAGDAMVMRLRA 72
Query: 129 LFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVE---MDDV 185
LF P A+ + Q LR G S K+ ++ +A G++ D +VE + D
Sbjct: 73 LFPASRFPEPQALAELDDQALRGCGFSASKSRAIKAIAAAKVSGLVPD--VVEALTLSDE 130
Query: 186 TMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEV 245
+ LT + G+G W+V M +I+ L K DV+P D GV +G + LYGL P M +
Sbjct: 131 ELITRLTELPGVGRWTVEMMLIYGLGKLDVMPASDFGVCEGYRRLYGLALKPTPKAMTGL 190
Query: 246 CEKWKPYRSVGSWYMWRL 263
E++ P+R+V +WY+WR+
Sbjct: 191 AERFAPFRTVAAWYLWRV 208
>gi|436836327|ref|YP_007321543.1| HhH-GPD family protein [Fibrella aestuarina BUZ 2]
gi|384067740|emb|CCH00950.1| HhH-GPD family protein [Fibrella aestuarina BUZ 2]
Length = 218
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 108/208 (51%), Gaps = 18/208 (8%)
Query: 72 ALRHLRDKDPLLATLID-------AHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYT 124
AL HL +DP+LA +I AH +++L SI+ QQ++ KAA++I+
Sbjct: 5 ALAHL-SQDPILARIIAETPALKPAHNHLDIPEQDRLYVALLNSIVSQQISTKAAEAIFR 63
Query: 125 RFVALFN----GEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIV 180
RF LF+ E P ++A S +LR G+S++K YL+ + L+ +
Sbjct: 64 RFRLLFSETAEAEGYPTPAQLVAKSIDELRSAGLSFQKIDYLQSVGRFALANDLTTSYVE 123
Query: 181 EMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGAL 240
++ D + + LT +KG+G W+V M ++F L +PDV P+ DL +R+ + Y G
Sbjct: 124 QLTDEAIVQYLTPIKGVGRWTVEMLLMFVLDRPDVFPIDDLVIRQKMIRAYEPTADSGKT 183
Query: 241 ------KMEEVCEKWKPYRSVGSWYMWR 262
++ + E W+PYR++ Y+WR
Sbjct: 184 GRALYKQLHAIAEPWRPYRTLACRYLWR 211
>gi|186685302|ref|YP_001868498.1| HhH-GPD family protein [Nostoc punctiforme PCC 73102]
gi|186467754|gb|ACC83555.1| HhH-GPD family protein [Nostoc punctiforme PCC 73102]
Length = 212
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 98/190 (51%), Gaps = 3/190 (1%)
Query: 72 ALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFN 131
L L + D LA +++ PP S F +L IL QQ++ AA++++ R +
Sbjct: 18 GLMVLANIDSDLARILETLGPPPIWSREPGFATLLCIILEQQVSVAAARAVFNRLCGVIV 77
Query: 132 GEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKML 191
+ P+ L + QLR IG S +K Y R LA L + MD+ T+ L
Sbjct: 78 ---PLTPENFLTLDDVQLRGIGFSRQKILYSRGLANAIASDQLDLSKLERMDETTIRTEL 134
Query: 192 TSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKP 251
+KGIG W+V ++++ +L +PDV P GDL + LQ L L P +++E + + W+P
Sbjct: 135 KRLKGIGDWTVDIYLLMALQRPDVFPKGDLAIAIALQKLKNLATRPTPVQLEGMTQHWRP 194
Query: 252 YRSVGSWYMW 261
+R+V + +W
Sbjct: 195 WRAVAARLLW 204
>gi|406994499|gb|EKE13485.1| hypothetical protein ACD_13C00015G0050 [uncultured bacterium]
Length = 198
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 56/166 (33%), Positives = 92/166 (55%), Gaps = 3/166 (1%)
Query: 102 FLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNILPDAVLAVSPQQLREIGVSYRKASY 161
F L I+ QQL+ + A I +R G + + +L + LR G+++ K
Sbjct: 36 FQGLVGDIIGQQLSGRVADVIESRLRTKIKGV--MTSEKILKMDENILRNCGMAWSKVRA 93
Query: 162 LRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDL 221
++DLA + +G L +S+ ++ D + K L +VKGIG W+ MF++F L +PDV PV DL
Sbjct: 94 IKDLALRTQNGELKVKSLDKLSDEEVRKELVAVKGIGPWTADMFLMFKLGRPDVFPVEDL 153
Query: 222 GVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSWYMWRLMEAK 267
G++ G + + G K+ + + W PYR+V SWY+WR +E +
Sbjct: 154 GIKNGFEKVTG-KKFDKEKSAKFALKNWSPYRTVASWYLWRSLENR 198
>gi|388583742|gb|EIM24043.1| DNA glycosylase [Wallemia sebi CBS 633.66]
Length = 297
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/181 (33%), Positives = 96/181 (53%), Gaps = 15/181 (8%)
Query: 74 RHLRDKDPLLATLIDAHRPPTFESSR----SPFLSLAKSILYQQLAYKAAKSIYTRFVAL 129
+H +D +++ DA FE +PF + +SIL QQ++YKA+K++ +F+
Sbjct: 13 KHYIHQDYRWSSIFDAVPCKPFEQGLDKPINPFRVICESILAQQISYKASKAVCYKFIRY 72
Query: 130 F-----------NGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDES 178
F + E+ P+ V +LREIG S RK Y LA+ + G ++
Sbjct: 73 FYPHLPEKREKDDPEEFPTPEQVANTEVSRLREIGFSVRKGEYAVGLAQAFVRGEITPRK 132
Query: 179 IVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPG 238
++E D + +MLT+++GIG W+VHM IF L + D+LP DLGV+ GL + EL
Sbjct: 133 LIEASDEELMEMLTNIRGIGPWTVHMLSIFMLRRVDILPPADLGVQLGLVKFWLGHELKA 192
Query: 239 A 239
A
Sbjct: 193 A 193
>gi|433543911|ref|ZP_20500308.1| DNA-3-methyladenine glycosylase II [Brevibacillus agri BAB-2500]
gi|432184811|gb|ELK42315.1| DNA-3-methyladenine glycosylase II [Brevibacillus agri BAB-2500]
Length = 309
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 100/194 (51%), Gaps = 12/194 (6%)
Query: 79 KDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNI-- 136
++P LA L+D F S+ K+I+ QQ+ A ++ R + L GE+
Sbjct: 103 EEPELAVLVDRFSGLRLMHDSDLFQSMVKTIIGQQINLTFAANLTQRLLTL-AGEEVADE 161
Query: 137 ---------LPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTM 187
+AV +S + LR + S RKA Y+ D A DG + E + M+D +
Sbjct: 162 QGVKFLAFPTAEAVARLSTEDLRPLQFSQRKAEYIIDYARAIVDGKVDLERLWAMEDEEI 221
Query: 188 FKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCE 247
LT ++GIG W+V ++F + +P++LP D+G+R G+ ++Y + P ++ + E
Sbjct: 222 IAHLTPLRGIGRWTVECLLMFGMGRPNLLPAADIGLRNGIALVYKMDNKPDEREIRRIGE 281
Query: 248 KWKPYRSVGSWYMW 261
+W P+RS+ S Y+W
Sbjct: 282 RWAPWRSIYSLYIW 295
>gi|284037159|ref|YP_003387089.1| HhH-GPD family protein [Spirosoma linguale DSM 74]
gi|283816452|gb|ADB38290.1| HhH-GPD family protein [Spirosoma linguale DSM 74]
Length = 207
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 110/198 (55%), Gaps = 9/198 (4%)
Query: 72 ALRHLRDKDPLLATLIDAHRPPTF--ESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVAL 129
AL HL +DP++A +I P + + +L+L +SI+ QQ++ KAA +I++RF AL
Sbjct: 8 ALTHLA-QDPVMARIIAETPVPKLVNDYADDVYLALLESIVSQQISVKAADAIFSRFRAL 66
Query: 130 FNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFK 189
F + DA+L + +LR G+S++K YL+ +AE + + + + D + +
Sbjct: 67 F-PDKYPQADALLLKTTDELRSAGLSFQKIKYLQSVAEFSLEKPIDRVHLDALTDEEIVQ 125
Query: 190 MLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLY-----GLKELPGALKMEE 244
L +KG+G W+V M ++F L +PD+ P+ DL +R+ + Y GL +
Sbjct: 126 YLLPIKGVGRWTVEMLLMFVLDRPDIFPIDDLVIRQRMLRAYPEQTNGLTGKALYKVLLS 185
Query: 245 VCEKWKPYRSVGSWYMWR 262
+ E W+PYR+ S Y+WR
Sbjct: 186 IAEPWRPYRTTASRYLWR 203
>gi|385263920|ref|ZP_10042007.1| HhH-GPD superfamily base excision DNA repair protein [Bacillus sp.
5B6]
gi|385148416|gb|EIF12353.1| HhH-GPD superfamily base excision DNA repair protein [Bacillus sp.
5B6]
Length = 310
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 97/188 (51%), Gaps = 5/188 (2%)
Query: 83 LATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNIL----- 137
L+ L + H + L K I++QQL A ++ RFV F + + +
Sbjct: 123 LSALFEEHAGTPLVLEYDVYNCLMKCIIHQQLNLSFAFTLTERFVHAFGEQKDGVWCYPE 182
Query: 138 PDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGI 197
P + A+ Q LRE+ S RKA Y D++ DG L+ + + D + K L +++GI
Sbjct: 183 PKTIAALDYQDLRELQFSMRKAEYAIDISRMIADGALNLAELSHLSDEAIMKKLITIRGI 242
Query: 198 GAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGS 257
G W+V ++F L +P++ P+ D+G++ ++ + L++ P M +V +W PY S S
Sbjct: 243 GPWTVQNVLMFGLGRPNLFPLADIGLQNAVKRRFALEDKPSKDVMLQVSSEWAPYLSYAS 302
Query: 258 WYMWRLME 265
Y+WR +E
Sbjct: 303 LYLWRSIE 310
>gi|254515529|ref|ZP_05127589.1| HhH-GPD family protein [gamma proteobacterium NOR5-3]
gi|219675251|gb|EED31617.1| HhH-GPD family protein [gamma proteobacterium NOR5-3]
Length = 204
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/195 (32%), Positives = 108/195 (55%), Gaps = 11/195 (5%)
Query: 72 ALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFN 131
A+ L D LA +++ P F S + F +L I QQ++ +AK+ + + VAL
Sbjct: 12 AVELLAAGDEDLALIVERFGAPPFVSRPNSFATLVSIIFEQQVSLASAKATFDK-VAL-- 68
Query: 132 GEDNILPD----AVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTM 187
+LPD L +S + LR GVS +K Y R +AE G L S+ D +
Sbjct: 69 ----LLPDFSEGKYLELSDETLRAAGVSRQKIRYTRLVAEAILAGRLPIRSLARKSDAQV 124
Query: 188 FKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCE 247
++LT++ G+G W+ ++++ +L +PD+ P+GDL + K + + G+ + P A +EE+ E
Sbjct: 125 RELLTAITGLGNWTADVYLMIALRRPDLWPIGDLALVKAVMSVKGIGDKPDARTLEELGE 184
Query: 248 KWKPYRSVGSWYMWR 262
+++PYRSV + +WR
Sbjct: 185 RYRPYRSVATGILWR 199
>gi|353236658|emb|CCA68648.1| related to MAG1-3-methyladenine DNA glycosylase [Piriformospora
indica DSM 11827]
Length = 433
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 52/134 (38%), Positives = 84/134 (62%), Gaps = 21/134 (15%)
Query: 112 QQLAYKAAKSIYTRFVALFNGEDNILPDAVLA----VSPQQ--------------LREIG 153
QQ+++KAA+S+ +F+ L+ D+ LP+ V +P++ LR G
Sbjct: 152 QQISWKAARSVNWKFMRLY---DDTLPETVPPPEEYTAPERFPPPHVVAETSLATLRSAG 208
Query: 154 VSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKP 213
+S RKA Y++DLA+ ++DG LS E ++ D + + L +V+GIG W++ MF IFSL +P
Sbjct: 209 LSARKAEYIQDLAQHFSDGRLSAEKLITASDEELREALIAVRGIGPWTIDMFAIFSLRRP 268
Query: 214 DVLPVGDLGVRKGL 227
++LP GDLGV++GL
Sbjct: 269 NILPTGDLGVQRGL 282
Score = 40.8 bits (94), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 14/25 (56%), Positives = 19/25 (76%)
Query: 241 KMEEVCEKWKPYRSVGSWYMWRLME 265
+ME + WKPYRS+G WYMW L++
Sbjct: 403 EMESLTASWKPYRSLGVWYMWSLVD 427
>gi|399048287|ref|ZP_10739905.1| 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase
[Brevibacillus sp. CF112]
gi|398053733|gb|EJL45893.1| 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase
[Brevibacillus sp. CF112]
Length = 326
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 100/194 (51%), Gaps = 12/194 (6%)
Query: 79 KDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNI-- 136
++P LA L+D F S+ K+I+ QQ+ A ++ R + L GE+
Sbjct: 120 EEPELAVLVDRFSGLRLMHDSDLFQSMVKTIIGQQINLTFAANLTQRLLTL-AGEEVADE 178
Query: 137 ---------LPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTM 187
+AV +S + LR + S RKA Y+ D A DG + E + M+D +
Sbjct: 179 QGVKFLAFPTAEAVARLSTEDLRPLQFSQRKAEYIIDYARAIVDGKVDLERLWAMEDEEI 238
Query: 188 FKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCE 247
LT ++GIG W+V ++F + +P++LP D+G+R G+ ++Y + P ++ + E
Sbjct: 239 IAHLTPLRGIGRWTVECLLMFGMGRPNLLPAADIGLRNGIALVYKMDNKPDEREIRRIGE 298
Query: 248 KWKPYRSVGSWYMW 261
+W P+RS+ S Y+W
Sbjct: 299 RWAPWRSIYSLYIW 312
>gi|442805735|ref|YP_007373884.1| HhH-GPD family protein [Clostridium stercorarium subsp.
stercorarium DSM 8532]
gi|442741585|gb|AGC69274.1| HhH-GPD family protein [Clostridium stercorarium subsp.
stercorarium DSM 8532]
Length = 200
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 64/192 (33%), Positives = 103/192 (53%), Gaps = 10/192 (5%)
Query: 75 HLRDKDPLLATLIDAHRPPTFESSR---SPFLSLAKSILYQQLAYKAAKSIYTRFVALFN 131
+L+++D L ID F R PF +L SI+ QQ+ KAA +++ R VA
Sbjct: 12 YLKERDKKLGEAIDR---IGFVKRRIIPDPFRALVYSIVGQQITGKAADTVFNRLVAR-A 67
Query: 132 GEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKML 191
GE I P+ + + +++ G+S RKA Y+R +AE +G + + D + +L
Sbjct: 68 GE--IAPERLAELDISEIKACGMSLRKAEYIRKIAEAAVNGTVDFGGLKAKPDREVIDIL 125
Query: 192 TSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKP 251
T++ G+G W+ M +IFSL +P+VL D G+RKGL L+G+ L K +E + P
Sbjct: 126 TTLPGVGIWTAEMLLIFSLARPNVLSFSDFGIRKGLMKLHGIDRLTKE-KFDEYRSLYSP 184
Query: 252 YRSVGSWYMWRL 263
Y + S Y+W +
Sbjct: 185 YCTTASIYLWEI 196
>gi|336396066|ref|ZP_08577465.1| HhH-GPD family protein [Lactobacillus farciminis KCTC 3681]
Length = 216
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 63/196 (32%), Positives = 102/196 (52%), Gaps = 11/196 (5%)
Query: 71 IALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALF 130
+++++L KD LA +I P ++ + L I+ Q L+ K A+ + R
Sbjct: 12 LSVQYLIKKDKHLAKVIQMVGPINYQLQTDAYAFLVSQIIEQMLSKKVAQVLTLRLTNEC 71
Query: 131 NGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIV----EMDDVT 186
+G I P + +S +QL IG+S+ K Y+++L T IL+ + I +M D
Sbjct: 72 DGL--ICPTKIKCLSDEQLLSIGISHSKVHYIQNL----TAAILTKKVIFSDYSKMSDSE 125
Query: 187 MFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVC 246
+ LT++KGIG WS MF+IFSL +PD+LP D+ + +Y A M++ C
Sbjct: 126 VIDSLTTIKGIGVWSAKMFLIFSLDRPDILPFEDVAFLQSYSWVYKTHNFKKAAVMKK-C 184
Query: 247 EKWKPYRSVGSWYMWR 262
KW PY S+ S YM++
Sbjct: 185 SKWHPYASIASRYMYQ 200
>gi|323141350|ref|ZP_08076242.1| base excision DNA repair protein, HhH-GPD family
[Phascolarctobacterium succinatutens YIT 12067]
gi|322414176|gb|EFY05003.1| base excision DNA repair protein, HhH-GPD family
[Phascolarctobacterium succinatutens YIT 12067]
Length = 237
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 109/197 (55%), Gaps = 6/197 (3%)
Query: 67 GEVDIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRF 126
GE +I +L+ KD LA I+ + + F ++ + I+ QQ++ KA +++ R
Sbjct: 30 GETEI--NYLKRKDKKLAWAIEQIGHIERKLDANLFAAVVRHIVGQQISSKAQATVWARL 87
Query: 127 VALFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVT 186
A + P V A S ++L+ +G+S RKA Y++D A+K G +++ +M D
Sbjct: 88 EARLK---VVTPFTVHAASAEELQGLGMSLRKAEYIKDFADKIVSGEFDLQAVEQMSDAE 144
Query: 187 MFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVC 246
L+S+KGIG W+ M ++F L +PD+L DL +++GL++LY +++ L +
Sbjct: 145 AITALSSLKGIGKWTAEMILLFCLQRPDILSYDDLAIQRGLRMLYHHRKITREL-FAKYQ 203
Query: 247 EKWKPYRSVGSWYMWRL 263
+++ PY S + Y+W +
Sbjct: 204 KRYSPYGSTAAIYLWEI 220
>gi|164656014|ref|XP_001729135.1| hypothetical protein MGL_3602 [Malassezia globosa CBS 7966]
gi|159103025|gb|EDP41921.1| hypothetical protein MGL_3602 [Malassezia globosa CBS 7966]
Length = 339
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 90/319 (28%), Positives = 134/319 (42%), Gaps = 85/319 (26%)
Query: 14 NPSASSKITFPPRKIRKLTTITPITKIAEIPVATAISTNSDNSPKIFKPLTFKGEVDIAL 73
PSA K PR I + P K+ + T + N PK L+F + A
Sbjct: 31 EPSAHKKAKVEPRVIDSELPLLPEDKVK---LCTTL-----NQPK----LSF--SIQEAR 76
Query: 74 RHLRDKDPLLATLIDAHRPPTFESSRSP-------FLSLAKSILYQQLAYKAAKSIYTRF 126
+HL D A+L ++ RS F L SIL QQ+++ AA+SI +F
Sbjct: 77 QHLCSIDSRFASLFAQLDLKVYDELRSGKVKELNLFRVLTTSILGQQISWLAARSIMYKF 136
Query: 127 VALFNGEDNILPD---------------AVLAVSPQQLREIGVSYRKASYLRDLAEKYTD 171
LF + + P+ VL + +LR G+S K Y+RD+A +++D
Sbjct: 137 CRLFAPDLPLQPNLDAVNKDELPFPTPLQVLKATDDELRRAGLSTAKIKYVRDVARRFSD 196
Query: 172 GILSDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLY 231
G L I+ M+ LT VKG+G W+ M ++F+L PD+LPVGDLGV++G+ Y
Sbjct: 197 GRLDVRKIIHMNPEACITELTQVKGVGRWTAEMLLMFALRSPDILPVGDLGVQRGIVKFY 256
Query: 232 -----GLK----------------ELPG-----ALKMEEVCEK----------------- 248
G K + PG +L +E++ +
Sbjct: 257 LSNSAGPKISERKRKDDYVHHDESKAPGFLPSNSLSLEQLVSRSQGNKTKKHMYLDPEEM 316
Query: 249 ------WKPYRSVGSWYMW 261
W PYRSV +MW
Sbjct: 317 SVLAAPWAPYRSVACMFMW 335
>gi|311067289|ref|YP_003972212.1| DNA-modified purine glycosidase [Bacillus atrophaeus 1942]
gi|310867806|gb|ADP31281.1| putative DNA-modified purine glycosidase [Bacillus atrophaeus 1942]
Length = 330
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 107/208 (51%), Gaps = 9/208 (4%)
Query: 65 FKGEVDIALRHLRDK--DPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSI 122
F+ E D LRH+ D L+ + + H S + + K I++QQL A ++
Sbjct: 125 FQWEND--LRHVLDHFSKTSLSAIFEEHAGTPLVLDYSVYNCIMKCIVHQQLNLSFAYTL 182
Query: 123 YTRFVALFNGEDNIL-----PDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDE 177
RFV F + + + P+ + A+ Q LR++ S RKA Y D + +GIL
Sbjct: 183 TERFVHTFGEQKDGVWCYPKPETIAALDYQDLRDLQFSMRKAEYAIDTSRMIAEGILDLS 242
Query: 178 SIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELP 237
+ ++ D + K L ++GIG W+V ++F L +P++ P+ D+G++ ++ + L + P
Sbjct: 243 ELAQLTDEEIMKKLIKIRGIGPWTVQNVLMFGLGRPNLFPLADIGLQNAIKRHFALDDKP 302
Query: 238 GALKMEEVCEKWKPYRSVGSWYMWRLME 265
M + ++W+PY S S Y+WR +E
Sbjct: 303 AKDVMLAMSKEWEPYLSYASLYLWRSIE 330
>gi|66046595|ref|YP_236436.1| DNA-3-methyladenine glycosylase II [Pseudomonas syringae pv.
syringae B728a]
gi|63257302|gb|AAY38398.1| DNA-3-methyladenine glycosylase II [Pseudomonas syringae pv.
syringae B728a]
Length = 221
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 104/195 (53%), Gaps = 3/195 (1%)
Query: 72 ALRHLRDKDPLLATLIDAHRPPT--FESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVAL 129
A+ LR DP LID P +++ PF +L +++ YQQL +A ++ R +L
Sbjct: 15 AVAALRSLDPQWQALIDLVGPCLHPVSAAQDPFQALVEAVAYQQLHARAGDAMVMRLRSL 74
Query: 130 FNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESI-VEMDDVTMF 188
F A++ + Q LR G S K ++ +A DG++ + S + M + +
Sbjct: 75 FPEVSFPSAPALVELDDQALRSCGFSAAKCRAIKAIAAARLDGLVPEVSAALAMGNEALV 134
Query: 189 KMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEK 248
+ L + G+G W+V M +I+ L + DV+P D GV +G + LY L+ P +M + E+
Sbjct: 135 ERLIQLPGVGRWTVEMMLIYGLGQLDVMPASDFGVCEGYRRLYALQLKPSHRQMARLAER 194
Query: 249 WKPYRSVGSWYMWRL 263
+ PYR++ +WY+WR+
Sbjct: 195 FAPYRTIAAWYLWRV 209
>gi|448677641|ref|ZP_21688831.1| DNA-3-methyladenine glycosylase [Haloarcula argentinensis DSM
12282]
gi|445773316|gb|EMA24349.1| DNA-3-methyladenine glycosylase [Haloarcula argentinensis DSM
12282]
Length = 203
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 100/186 (53%), Gaps = 6/186 (3%)
Query: 80 DPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNILPD 139
+P + L++ H T + + F L SIL QQ++ +A + R LF+ + P
Sbjct: 12 NPDIGPLVETHGELTLDPASDLFERLVVSILRQQVSMASAAATRDR---LFDAV-TVTPA 67
Query: 140 AVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIGA 199
+ + LR+ G+S +K Y+ ++A+ + + S + + D + + LT++ G+G
Sbjct: 68 GIRDADNEVLRDAGLSRQKTRYVNEVADAFLEHGYSLATFEDAADEEIHEKLTAITGVGD 127
Query: 200 WSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSWY 259
W+ +M ++F+ + DV PVGDLG+RKG + + G + +M E E+W PYRS S Y
Sbjct: 128 WTANMQLLFAFGREDVFPVGDLGIRKGFEAVVG--DGYSRAEMCEYAERWSPYRSYASLY 185
Query: 260 MWRLME 265
+WR E
Sbjct: 186 LWRASE 191
>gi|396461943|ref|XP_003835583.1| similar to DNA-3-methyladenine glycosylase [Leptosphaeria maculans
JN3]
gi|312212134|emb|CBX92218.1| similar to DNA-3-methyladenine glycosylase [Leptosphaeria maculans
JN3]
Length = 346
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 63/168 (37%), Positives = 86/168 (51%), Gaps = 7/168 (4%)
Query: 75 HLRDKDPLLATLIDAHR-----PPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVAL 129
HL D L L++ HR P + PF L+K I+ QQ++ +AA SI +F +L
Sbjct: 172 HLIRTDERLRVLVEKHRCEMFSPEGLKEVIDPFTELSKGIIGQQVSGQAATSIRQKFTSL 231
Query: 130 FNGEDNILPD--AVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTM 187
F P VLA+ LR G+S RKA Y+ LA K+ G LS +V D +
Sbjct: 232 FPTTHPSFPSPSQVLALDLPTLRTAGLSQRKAEYIHGLAGKFASGELSAAMLVGASDEEL 291
Query: 188 FKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKE 235
+ L +V+G+G WSV MF F L + DV GDLGV++G G E
Sbjct: 292 VERLVAVRGLGRWSVEMFACFGLKRMDVFSTGDLGVQQGAHSGAGKGE 339
>gi|149181244|ref|ZP_01859742.1| YfjP [Bacillus sp. SG-1]
gi|148850969|gb|EDL65121.1| YfjP [Bacillus sp. SG-1]
Length = 290
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 114/223 (51%), Gaps = 5/223 (2%)
Query: 50 STNSDNSPKIFKPLTFKGEVDIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSI 109
S ++D+S + F+ E + H D L + H SP+ +L KSI
Sbjct: 67 SEDADDSRLAYLKRIFQWEGTLRDIHQHFLDTDLRDIFIEHSGTPIVLEFSPYATLMKSI 126
Query: 110 LYQQLAYKAAKSIYTRFVALFNGEDNIL-----PDAVLAVSPQQLREIGVSYRKASYLRD 164
++QQL A ++ RFV + + + + P V + +LRE+ S RKA Y+
Sbjct: 127 IHQQLNLAFAHTLTQRFVQKYGRQKDGVWFYPQPSDVAELDISELREMQFSQRKAEYVIG 186
Query: 165 LAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVR 224
++++ +G L+ + + E D + K L ++GIG W+ +++F+L + ++ P D+G++
Sbjct: 187 VSKEIAEGRLNLQELEEKSDEEILKELVKLRGIGPWTAENYLMFALGRLNLFPKTDIGIQ 246
Query: 225 KGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSWYMWRLMEAK 267
L+ LYG+ P +++++ W PY S S Y+WR +E +
Sbjct: 247 NALKKLYGMDRKPSLAEIDKMSAAWNPYLSYASLYLWRSIENR 289
>gi|94984215|ref|YP_603579.1| HhH-GPD [Deinococcus geothermalis DSM 11300]
gi|94554496|gb|ABF44410.1| endonuclease III, DNA-3-methyladenine glycosidase II [Deinococcus
geothermalis DSM 11300]
Length = 216
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 57/161 (35%), Positives = 89/161 (55%), Gaps = 5/161 (3%)
Query: 101 PFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNILPDAVLAVSPQQLREIGVSYRKAS 160
PF +L +S++ QQL+ +AA SI R G + P+A+L P +LR +G+S+ K
Sbjct: 46 PFGTLVRSVVGQQLSTQAAASIAARLEDALGG---VEPEALLRTPPDKLRALGLSWAKVR 102
Query: 161 YLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGD 220
+R LA+ G + + + D + LT + GIG W+V MF++F L +PDV GD
Sbjct: 103 TVRALADAALSGQVDFAHLSSLPDAAVIDALTPLPGIGRWTVEMFLMFGLARPDVFSFGD 162
Query: 221 LGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSWYMW 261
L +R+GL LY PG+ + V W PYR++ + +W
Sbjct: 163 LVLRQGLSRLYP-HVAPGSAQ-AAVVAAWSPYRTLAARVLW 201
>gi|326388903|ref|ZP_08210485.1| HhH-GPD [Novosphingobium nitrogenifigens DSM 19370]
gi|326206503|gb|EGD57338.1| HhH-GPD [Novosphingobium nitrogenifigens DSM 19370]
Length = 205
Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 55/160 (34%), Positives = 89/160 (55%), Gaps = 3/160 (1%)
Query: 102 FLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNILPDAVLAVSPQQLREIGVSYRKASY 161
+ +L ++I+ QQ++ AA S+++R AL + P AVLA S LR G+S +K Y
Sbjct: 41 WRTLLRTIVGQQVSVAAAASVWSRLEALLG--QGMAPAAVLAASFDDLRACGLSRQKQGY 98
Query: 162 LRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDL 221
R L E +G + E++ DD ++LT +KGIG WS ++++F+ +PD+ P GDL
Sbjct: 99 ARSLCELVEEGAIDFEAL-PGDDEAAIELLTRIKGIGRWSAEIYLLFAEGRPDIWPAGDL 157
Query: 222 GVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSWYMW 261
V+ GL L L E P + + W+P+R + + W
Sbjct: 158 AVQVGLAKLLDLPERPDERTTRSLADDWRPHRGSVAIFTW 197
>gi|395492169|ref|ZP_10423748.1| HhH-GPD family protein [Sphingomonas sp. PAMC 26617]
Length = 207
Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 106/191 (55%), Gaps = 5/191 (2%)
Query: 72 ALRHLRDKDPLLATLID-AHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALF 130
A+ L ++P A ++ PP S+R F +L ++I+ QQ++ +A+S Y + +
Sbjct: 11 AMDALAAREPAFAVALERVGYPPPRISARG-FGTLLRTIVGQQVSVTSAQSTYKKLEGIV 69
Query: 131 NGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKM 190
D+ P ++A + +QLR G+S +KASY R L+E G L E++ E D+ + K
Sbjct: 70 GSLDD--PANIIAATDEQLRAAGLSRQKASYARSLSELVASGALDLENLPEDDEEAIAK- 126
Query: 191 LTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWK 250
L +VKGIG WS ++++F+ + DV P GDL V+ + L G + P + E+ E W+
Sbjct: 127 LVAVKGIGRWSAEIYLLFAEGRTDVWPAGDLAVQIEIGRLLGHEARPSEKLVRELAEAWR 186
Query: 251 PYRSVGSWYMW 261
P+R + + W
Sbjct: 187 PHRGAAAIFAW 197
>gi|302187067|ref|ZP_07263740.1| DNA-3-methyladenine glycosylase II [Pseudomonas syringae pv.
syringae 642]
Length = 226
Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 108/203 (53%), Gaps = 14/203 (6%)
Query: 72 ALRHLRDKDPLLATLIDAHRPPTFES---SRSPFLSLAKSILYQQLAYKAAKSIYTRFVA 128
A+ LR DP LID H P ++ PF +L K++ YQQL +A ++ +R A
Sbjct: 15 AVASLRSIDPQWQLLID-HVGPCLHPVSVAQDPFQALVKAVAYQQLHARAGDAMVSRLRA 73
Query: 129 LFNGEDNILPD-------AVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESI-V 180
LF D+ P+ A++ + Q LR G S K ++ +A G++ + S +
Sbjct: 74 LFL--DDSSPEVSFPGAQALVELDDQALRSCGFSASKCRAIKAIAAARLGGLVPEVSAAL 131
Query: 181 EMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGAL 240
M + + + L + G+G W+V M +I+ L + DV+P D GV +G + LY L+ P
Sbjct: 132 AMGNEALVERLIQLPGVGRWTVEMMLIYGLGQLDVMPASDFGVCEGYRRLYALELKPSHR 191
Query: 241 KMEEVCEKWKPYRSVGSWYMWRL 263
+M + E++ PYR++ +WY+WR+
Sbjct: 192 QMARLAERFAPYRTIAAWYLWRV 214
>gi|427427421|ref|ZP_18917465.1| DNA-3-methyladenine glycosylase II [Caenispirillum salinarum AK4]
gi|425883347|gb|EKV32023.1| DNA-3-methyladenine glycosylase II [Caenispirillum salinarum AK4]
Length = 231
Score = 103 bits (258), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 58/171 (33%), Positives = 93/171 (54%), Gaps = 1/171 (0%)
Query: 92 PPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNILPDAVLAVSPQQLRE 151
PP + F SL + I+ QQ++ A +I+ + VA F+G P+AV+A S + L
Sbjct: 43 PPAPRVRPAGFGSLLRIIIDQQVSTAAGAAIWDKTVAAFDGAGPT-PEAVVAASEETLTA 101
Query: 152 IGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLH 211
G+S K Y+R LAE+ DG L +++ + D + L+ V GIG WS+ ++++F L
Sbjct: 102 CGLSRPKRRYVRALAERIVDGRLDVDALADAPDDAVRAALSPVPGIGPWSIDIYLLFCLG 161
Query: 212 KPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSWYMWR 262
+ DV P GDL ++ L+ L P A M + E W+P+R + +WR
Sbjct: 162 RTDVWPAGDLALQAACHALHDLPARPDAKAMTPLAEAWRPWRGAVALLLWR 212
>gi|419823514|ref|ZP_14347059.1| putative DNA-modified purine glycosidase [Bacillus atrophaeus C89]
gi|388472302|gb|EIM09080.1| putative DNA-modified purine glycosidase [Bacillus atrophaeus C89]
Length = 287
Score = 103 bits (258), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 107/208 (51%), Gaps = 9/208 (4%)
Query: 65 FKGEVDIALRHLRDK--DPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSI 122
F+ E D LRH+ D L+ + + H S + + K I++QQL A ++
Sbjct: 82 FQWEND--LRHVLDHFSKTSLSAIFEEHAGTPLVLDYSVYNCIMKCIVHQQLNLSFAYTL 139
Query: 123 YTRFVALFNGEDNIL-----PDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDE 177
RFV F + + + P+ + A+ Q LR++ S RKA Y D + +GIL
Sbjct: 140 TERFVHTFGEQKDGVWCYPKPETIAALDYQDLRDLQFSMRKAEYAIDTSRMIAEGILDLS 199
Query: 178 SIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELP 237
+ ++ D + K L ++GIG W+V ++F L +P++ P+ D+G++ ++ + L + P
Sbjct: 200 ELAQLTDEEIMKKLIKIRGIGPWTVQNVLMFGLGRPNLFPLADIGLQNAIKRHFALDDKP 259
Query: 238 GALKMEEVCEKWKPYRSVGSWYMWRLME 265
M + ++W+PY S S Y+WR +E
Sbjct: 260 AKDVMLAMSKEWEPYLSYASLYLWRSIE 287
>gi|421613727|ref|ZP_16054799.1| HhH-GPD family protein [Rhodopirellula baltica SH28]
gi|408495498|gb|EKK00085.1| HhH-GPD family protein [Rhodopirellula baltica SH28]
Length = 198
Score = 103 bits (258), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 106/182 (58%), Gaps = 9/182 (4%)
Query: 92 PPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNILPDAVLAVSPQQLRE 151
PP+++ + F +LA+ +L QQ++ ++A+S + + L G + P ++ +S QQ R
Sbjct: 15 PPSWQRP-AGFETLARIVLEQQVSLRSAESTFHKLQQLLEGP--LTPRGIVGLSAQQTRA 71
Query: 152 IGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLH 211
GVS +K YL LA DG + + +M D LT+ GIG WS ++++ +L+
Sbjct: 72 CGVSRQKHRYLNQLAADIVDGRFVLDRLPDMSDQEARDQLTARLGIGHWSAEVYLMSALN 131
Query: 212 KPDVLPVGDLGVRKGLQVLYGLK--ELPGALKMEEVCEKWKPYRSVGSWYMWRL-MEAKG 268
+PD+LP GDLG+ KG++ L G + + ++ ++W+PYRS+ + +W L ++ +G
Sbjct: 132 RPDILPFGDLGLLKGVEELDGGRYDDFDAIIRR---ADRWRPYRSMATRLVWALYLDNRG 188
Query: 269 VL 270
+L
Sbjct: 189 LL 190
>gi|452752848|ref|ZP_21952588.1| DNA-3-methyladenine glycosylase II [alpha proteobacterium JLT2015]
gi|451959920|gb|EMD82336.1| DNA-3-methyladenine glycosylase II [alpha proteobacterium JLT2015]
Length = 203
Score = 103 bits (258), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 55/160 (34%), Positives = 89/160 (55%), Gaps = 3/160 (1%)
Query: 102 FLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNILPDAVLAVSPQQLREIGVSYRKASY 161
+ +L ++I+ QQ++ KAA SI+ + + D +P +LA S LR G+S +KA+Y
Sbjct: 39 YETLLRTIIGQQVSVKAAASIWDKLAGIVG--DVHVPAVMLAASDADLRAAGLSRQKAAY 96
Query: 162 LRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDL 221
R LAE + G L +++ E DD L VKGIG WS ++++F+ +PD+ P GDL
Sbjct: 97 ARSLAEHVSAGTLDLDALPE-DDEEAIARLVDVKGIGRWSAEIYLLFAEGRPDIWPAGDL 155
Query: 222 GVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSWYMW 261
V+ + GL+ P + + E W+P+R + MW
Sbjct: 156 AVQIEAGRIMGLEGRPTERQTRALAEAWRPHRGAAAILMW 195
>gi|210630624|ref|ZP_03296527.1| hypothetical protein COLSTE_00412 [Collinsella stercoris DSM 13279]
gi|210160399|gb|EEA91370.1| base excision DNA repair protein, HhH-GPD family [Collinsella
stercoris DSM 13279]
Length = 189
Score = 103 bits (258), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 62/176 (35%), Positives = 96/176 (54%), Gaps = 15/176 (8%)
Query: 95 FESSR--SPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNILPDAVLAVSPQQLREI 152
E SR S F SLA SI+ Q L+ KA ++I +R L +G + P+ + + + ++
Sbjct: 7 LEYSRPESAFHSLAHSIIEQMLSMKAGRAIESRLRELCDG--DYTPECIAGIPAENIKSC 64
Query: 153 GVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHK 212
G+S+RK L+ LAE L ES+ E+ D ++K L + GIG W+ MF++F L +
Sbjct: 65 GMSFRKVQSLKTLAEYALANDL--ESLAELPDEDVYKTLVQLPGIGKWTCDMFLLFYLGR 122
Query: 213 PDVLPVGDLGVRKGLQVLYGL----KELPGALKMEEVCEKWKPYRSVGSWYMWRLM 264
PD+LPV D +R+ + LYG KE+ VC W+PY S Y++R +
Sbjct: 123 PDILPVEDGALRQAFEWLYGAPIVSKEVQAV-----VCSLWRPYSSTAVRYLYRAL 173
>gi|88706229|ref|ZP_01103936.1| DNA-3-methyladenine glycosidase II [Congregibacter litoralis KT71]
gi|88699623|gb|EAQ96735.1| DNA-3-methyladenine glycosidase II [Congregibacter litoralis KT71]
Length = 204
Score = 103 bits (257), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 62/185 (33%), Positives = 97/185 (52%), Gaps = 5/185 (2%)
Query: 78 DKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNIL 137
D+D LA ++ H PP S F +L I QQ++ +AKS Y + AL
Sbjct: 20 DRD--LARVVARHGPPKLLSRPPGFPTLVYIIFEQQVSLASAKSTYDKVAALL---PEFT 74
Query: 138 PDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGI 197
+A L +S + LR GVS +KA Y R +AE G L ++ D + +LT++ GI
Sbjct: 75 AEAYLQLSDEALRAAGVSRQKARYTRLVAEATIAGDLPIHALGRKPDEEVRTLLTAITGI 134
Query: 198 GAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGS 257
G W+ ++++ +L +PD+ PVGDL + K + P L +E + E+++PYRSV +
Sbjct: 135 GNWTADVYLMLALRRPDLWPVGDLALVKAATAIKSRPHKPDKLWLENLGERYRPYRSVAT 194
Query: 258 WYMWR 262
WR
Sbjct: 195 GIFWR 199
>gi|387897306|ref|YP_006327602.1| nucleoside deoxyribosyltransferase [Bacillus amyloliquefaciens Y2]
gi|387171416|gb|AFJ60877.1| nucleoside deoxyribosyltransferase [Bacillus amyloliquefaciens Y2]
Length = 310
Score = 103 bits (257), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 97/188 (51%), Gaps = 5/188 (2%)
Query: 83 LATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNIL----- 137
L+ L + H + L K I++QQL A ++ RFV F + + +
Sbjct: 123 LSALFEEHAGTPLVLEYDVYNCLMKCIIHQQLNLSFAFTLTERFVHAFGEQKDGVWCYPE 182
Query: 138 PDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGI 197
P + A+ Q LR++ S RKA Y D++ DG L+ + + D + K L +++GI
Sbjct: 183 PKTIAALDYQDLRKLQFSMRKAEYAIDISRMIADGALNLAELTHLSDEGIMKKLITIRGI 242
Query: 198 GAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGS 257
G W+V ++F L +P++ P+ D+G++ ++ + L++ P M +V +W PY S S
Sbjct: 243 GPWTVQNVLMFGLGRPNLFPLADIGLQNAVKRRFALEDKPSKDVMLQVSSEWAPYLSYAS 302
Query: 258 WYMWRLME 265
Y+WR +E
Sbjct: 303 LYLWRSIE 310
>gi|384264376|ref|YP_005420083.1| DNA-3-methyladenine glycosylase II [Bacillus amyloliquefaciens
subsp. plantarum YAU B9601-Y2]
gi|380497729|emb|CCG48767.1| DNA-3-methyladenine glycosylase II [Bacillus amyloliquefaciens
subsp. plantarum YAU B9601-Y2]
Length = 287
Score = 103 bits (257), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 97/188 (51%), Gaps = 5/188 (2%)
Query: 83 LATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNIL----- 137
L+ L + H + L K I++QQL A ++ RFV F + + +
Sbjct: 100 LSALFEEHAGTPLVLEYDVYNCLMKCIIHQQLNLSFAFTLTERFVHAFGEQKDGVWCYPE 159
Query: 138 PDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGI 197
P + A+ Q LR++ S RKA Y D++ DG L+ + + D + K L +++GI
Sbjct: 160 PKTIAALDYQDLRKLQFSMRKAEYAIDISRMIADGALNLAELTHLSDEGIMKKLITIRGI 219
Query: 198 GAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGS 257
G W+V ++F L +P++ P+ D+G++ ++ + L++ P M +V +W PY S S
Sbjct: 220 GPWTVQNVLMFGLGRPNLFPLADIGLQNAVKRRFALEDKPSKDVMLQVSSEWAPYLSYAS 279
Query: 258 WYMWRLME 265
Y+WR +E
Sbjct: 280 LYLWRSIE 287
>gi|386858113|ref|YP_006262290.1| Putative 3-methyladenine DNA glycosylase [Deinococcus gobiensis
I-0]
gi|380001642|gb|AFD26832.1| Putative 3-methyladenine DNA glycosylase [Deinococcus gobiensis
I-0]
Length = 186
Score = 103 bits (257), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 62/180 (34%), Positives = 92/180 (51%), Gaps = 12/180 (6%)
Query: 93 PTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNILPDAVLAVSPQQLREI 152
P E++ PF +L +S+ QQL+ KAA SI+ R VA + V LR +
Sbjct: 13 PVLEATADPFGTLVRSVAGQQLSVKAAASIHGRLVAALG---EVTAQTVRRTPGDDLRAL 69
Query: 153 GVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHK 212
G+S+ K + LA+ G + + D + L+++ GIG W+ MF++F L +
Sbjct: 70 GLSWAKVRTVHALADAALGGRIDFAHLSGQGDEEIVAELSALPGIGRWTAEMFLMFGLAR 129
Query: 213 PDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSWYMW---RLMEAKGV 269
PDV GDL +R+GL LY PGA +V W PYR++G+ Y+W L A GV
Sbjct: 130 PDVFSFGDLALRQGLARLY-----PGA-PQADVPLPWAPYRTLGARYLWADNALHRAGGV 183
>gi|16331437|ref|NP_442165.1| hypothetical protein slr0231 [Synechocystis sp. PCC 6803]
gi|383323179|ref|YP_005384032.1| hypothetical protein SYNGTI_2270 [Synechocystis sp. PCC 6803
substr. GT-I]
gi|383326348|ref|YP_005387201.1| hypothetical protein SYNPCCP_2269 [Synechocystis sp. PCC 6803
substr. PCC-P]
gi|383492232|ref|YP_005409908.1| hypothetical protein SYNPCCN_2269 [Synechocystis sp. PCC 6803
substr. PCC-N]
gi|384437500|ref|YP_005652224.1| hypothetical protein SYNGTS_2271 [Synechocystis sp. PCC 6803]
gi|451815590|ref|YP_007452042.1| hypothetical protein MYO_122960 [Synechocystis sp. PCC 6803]
gi|1001607|dbj|BAA10235.1| slr0231 [Synechocystis sp. PCC 6803]
gi|339274532|dbj|BAK51019.1| hypothetical protein SYNGTS_2271 [Synechocystis sp. PCC 6803]
gi|359272498|dbj|BAL30017.1| hypothetical protein SYNGTI_2270 [Synechocystis sp. PCC 6803
substr. GT-I]
gi|359275668|dbj|BAL33186.1| hypothetical protein SYNPCCN_2269 [Synechocystis sp. PCC 6803
substr. PCC-N]
gi|359278838|dbj|BAL36355.1| hypothetical protein SYNPCCP_2269 [Synechocystis sp. PCC 6803
substr. PCC-P]
gi|407961178|dbj|BAM54418.1| hypothetical protein BEST7613_5487 [Bacillus subtilis BEST7613]
gi|451781559|gb|AGF52528.1| hypothetical protein MYO_122960 [Synechocystis sp. PCC 6803]
Length = 152
Score = 103 bits (257), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 73/123 (59%)
Query: 144 VSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIGAWSVH 203
V P+ LRE+G+S K YL+ A + S + D + + LT++KGIG W+
Sbjct: 23 VDPELLRELGISRYKTRYLKTWAIALQNNFPSLPELETWGDRAIVEQLTAIKGIGPWTAQ 82
Query: 204 MFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSWYMWRL 263
+F++F L + D+LP DLG+R +Q LY L + P ++ E + W+PYRS+ SWY+WR
Sbjct: 83 LFLLFRLRRQDILPNQDLGIRIAIQKLYQLPDRPNPKQVSEYGKNWQPYRSLASWYLWRS 142
Query: 264 MEA 266
+ A
Sbjct: 143 LSA 145
>gi|422618019|ref|ZP_16686719.1| DNA-3-methyladenine glycosylase II [Pseudomonas syringae pv.
japonica str. M301072]
gi|330898399|gb|EGH29818.1| DNA-3-methyladenine glycosylase II [Pseudomonas syringae pv.
japonica str. M301072]
Length = 280
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 99/175 (56%), Gaps = 10/175 (5%)
Query: 97 SSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNILPD-------AVLAVSPQQL 149
+++ PF +L K++ YQQL +A ++ R ALF D+ LP+ A++ + Q L
Sbjct: 96 AAQDPFQALVKAVAYQQLHARAGDAMVGRLRALF--LDDSLPEVSFPGAQALVDLDDQAL 153
Query: 150 REIGVSYRKASYLRDLAEKYTDGILSDESI-VEMDDVTMFKMLTSVKGIGAWSVHMFMIF 208
R G S K ++ +A DG++ + S + M + + + L + G+G W+V M +I+
Sbjct: 154 RSCGFSASKCRAIKAIAAARLDGLVPEVSAALAMGNEALVERLIQLPGVGRWTVEMMLIY 213
Query: 209 SLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSWYMWRL 263
L + DV+P D GV +G + LY L+ P +M + E++ PYR++ +WY+WR+
Sbjct: 214 GLGQLDVMPASDFGVCEGYRRLYALQLKPSHRQMARLAERFAPYRTIAAWYLWRV 268
>gi|329896444|ref|ZP_08271522.1| HhH-GPD [gamma proteobacterium IMCC3088]
gi|328921762|gb|EGG29134.1| HhH-GPD [gamma proteobacterium IMCC3088]
Length = 206
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/201 (33%), Positives = 106/201 (52%), Gaps = 6/201 (2%)
Query: 62 PLTFKGEVDIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKS 121
PL++ +V +AL L D+ +A + P +S ++L + I+ QQL+ KAA +
Sbjct: 2 PLSYP-DVCLALDTLADRCQYVAQALQQVGYPPERVGKSDDMALVRIIVGQQLSTKAAAT 60
Query: 122 IYTRFVALF-NGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIV 180
I R L +G + +P + S +LR +G+S K YLR L + G L
Sbjct: 61 INQRLSDLLGDGGYSNIP----SFSDDELRAVGMSRPKIRYLRALTDALLTGELVLADFP 116
Query: 181 EMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGAL 240
MDD ++ K LT++ G G WS HM+++F+L + DV P GDL VR G+ + G
Sbjct: 117 SMDDESVVKALTALPGFGRWSAHMYLLFNLQRTDVWPTGDLAVRVGISRMVGASGRLTEA 176
Query: 241 KMEEVCEKWKPYRSVGSWYMW 261
++E+ E+W+P+RS S W
Sbjct: 177 ELEQWGERWRPHRSALSLLAW 197
>gi|389693588|ref|ZP_10181682.1| 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase
[Microvirga sp. WSM3557]
gi|388586974|gb|EIM27267.1| 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase
[Microvirga sp. WSM3557]
Length = 214
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 96/190 (50%), Gaps = 3/190 (1%)
Query: 72 ALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFN 131
L L DP++A L ++ P F LA ++ QQ++ +A +I+ R +
Sbjct: 14 GLSELALADPVMAKLAESGVTPQLRRRPPGFEGLAWIVVGQQVSTASATAIWNRLRQIL- 72
Query: 132 GEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKML 191
+ PD L +S + LR G+S K LR LA +G L + + ++L
Sbjct: 73 --EPPTPDVFLRLSDEDLRAAGLSAGKVRTLRALATDIVEGRLPLDELQNRPAEEAHELL 130
Query: 192 TSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKP 251
T VKGIG W+ ++++F L PD P GDL V++ ++ YGL++ P A + + E W+P
Sbjct: 131 TRVKGIGPWTADVYLLFCLGHPDAFPSGDLAVQEAARLAYGLEQRPDARSLASLAETWRP 190
Query: 252 YRSVGSWYMW 261
+R V + +W
Sbjct: 191 WRGVAAKMLW 200
>gi|347752385|ref|YP_004859950.1| HhH-GPD family protein [Bacillus coagulans 36D1]
gi|347584903|gb|AEP01170.1| HhH-GPD family protein [Bacillus coagulans 36D1]
Length = 287
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 101/206 (49%), Gaps = 5/206 (2%)
Query: 65 FKGEVDIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYT 124
F+ E DIA L L HR F SP+ L K I++QQL K A ++
Sbjct: 82 FQWEKDIAGITNHFTGTALEPLFKEHRGTPFVLDFSPYACLIKCIIHQQLNMKFAHTLTE 141
Query: 125 RFVALFNGEDNIL-----PDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESI 179
RFV F + + + P+ A+ LR + S RKA Y+ L+ L +
Sbjct: 142 RFVYHFGFQKDGVWFYPSPEKTAALQVADLRALQFSERKAEYVIGLSRLVASSELDLAEL 201
Query: 180 VEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGA 239
+ D + K L ++GIG W+V F++F L + + P D+G++K L+ L+ L++ P
Sbjct: 202 EKKPDEEILKTLVKIRGIGPWTVQNFLMFGLGRLNHFPKADIGIQKALKKLFQLEKKPTY 261
Query: 240 LKMEEVCEKWKPYRSVGSWYMWRLME 265
+M+ + W+PY S S Y+WR +E
Sbjct: 262 EEMDAYAKDWEPYLSYASLYLWRSIE 287
>gi|374581277|ref|ZP_09654371.1| HhH-GPD superfamily base excision DNA repair protein
[Desulfosporosinus youngiae DSM 17734]
gi|374417359|gb|EHQ89794.1| HhH-GPD superfamily base excision DNA repair protein
[Desulfosporosinus youngiae DSM 17734]
Length = 231
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 104/197 (52%), Gaps = 6/197 (3%)
Query: 67 GEVDIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRF 126
GE +I HL+ KDP+L ID F++L SI+ QQ++ KA +I+ R
Sbjct: 10 GEKEI--EHLKAKDPILGAAIDEVGHIDRVVIPDMFMALVNSIVGQQISTKAQATIWERM 67
Query: 127 VALFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVT 186
F + P+ + +S + L+ G+S RKA Y++++A DG L + M D
Sbjct: 68 QNQFA---PLTPENIGIISAEDLQTCGISMRKALYIKEIAAAVLDGSLDLAHLHTMTDDE 124
Query: 187 MFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVC 246
+ K L +KGIG W+ M M FS+ + D++ DL + +GL+++Y +++ L +
Sbjct: 125 ICKRLCRIKGIGVWTAEMLMTFSMQRMDIMSWDDLAIHRGLRMIYHHRKITPEL-FAKYK 183
Query: 247 EKWKPYRSVGSWYMWRL 263
++ PY +V S Y+W +
Sbjct: 184 RRYSPYATVASLYLWAI 200
>gi|406603339|emb|CCH45131.1| Endonuclease III-like protein 1 [Wickerhamomyces ciferrii]
Length = 341
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/226 (31%), Positives = 114/226 (50%), Gaps = 23/226 (10%)
Query: 10 NISQNPSASSKITFPPRKIRKLTTITPITKIAEIPVATAISTNSDNSPKIFKPLTFKGEV 69
N++++P + K++F R+ L + P+ + +S P+ F L G
Sbjct: 56 NVNKSPKSPDKVSFRQREAHLL---------EKFPIPSDLSL-----PESFTSLHKPGFN 101
Query: 70 DIALRHLRDKDPLLATLIDAHRPPTFE-------SSRSPFLSLAKSILYQQLAYKAAKSI 122
D AL+++ KDP L LI + F S + F+ L S++ QQ++ AAKSI
Sbjct: 102 D-ALKYIITKDPSLYPLIISEPFKQFHIDEIPGSSDQEHFIKLCHSVIGQQVSGAAAKSI 160
Query: 123 YTRFVALFNGEDNI-LPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVE 181
+ VA+FN E P + Q LR G+S RK Y+ ++ +K+ + +S++
Sbjct: 161 ENKVVAVFNDEGIFPTPKELFDKDDQLLRSAGLSTRKTEYINEICKKFINKEISNDFFQT 220
Query: 182 MDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGL 227
D + + L S+KGIG WS MF++F LHK DV DLGV +G+
Sbjct: 221 ASDEEILERLISIKGIGEWSAKMFLVFGLHKLDVFAHDDLGVARGI 266
>gi|73661598|ref|YP_300379.1| DNA-3-methyladenine glycosidase [Staphylococcus saprophyticus
subsp. saprophyticus ATCC 15305]
gi|72494113|dbj|BAE17434.1| putative DNA-3-methyladenine glycosidase [Staphylococcus
saprophyticus subsp. saprophyticus ATCC 15305]
Length = 221
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 110/193 (56%), Gaps = 4/193 (2%)
Query: 70 DIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRF-VA 128
D ++ L +D LA LI+ ++ P SL +SI+ QQ+ A+SI+ + +A
Sbjct: 10 DACVQTLIKQDATLAQLINQIGDLQIQTRADPLKSLIRSIIGQQITVAVAQSIFQKLSIA 69
Query: 129 LFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMF 188
+ +D+ + + + +++ +G+S K +Y++++ +G L+ E + +MDD ++
Sbjct: 70 I---DDHWTVNQLSQLRESEMKALGLSQSKINYIQNVLFAVRNGQLNFEQLYKMDDNSVI 126
Query: 189 KMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEK 248
LT +KGIG W+ +F++F+L + ++LP+ D+G+++ Q LY + ++ E+
Sbjct: 127 NALTQIKGIGRWTAEVFLLFTLQRKNILPIYDVGLQRAAQWLYQTTKAERKKQLTICKEQ 186
Query: 249 WKPYRSVGSWYMW 261
W+ S+G++Y+W
Sbjct: 187 WQGCASIGAFYLW 199
>gi|456983334|gb|EMG19662.1| base excision DNA repair protein, HhH-GPD family [Leptospira
interrogans serovar Copenhageni str. LT2050]
Length = 185
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 100/176 (56%), Gaps = 1/176 (0%)
Query: 86 LIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNILPDAVLAVS 145
+ID+ ++ +P+ L KS+L QQL+ K A + R ++L + P+ +L +
Sbjct: 1 MIDSIGLCKLKTIGTPYQVLIKSVLGQQLSVKVALTFERRLISLVGSKKIPSPEQILKIP 60
Query: 146 PQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIGAWSVHMF 205
++R+IGVS K ++ +AE Y ++D + +++D + K+L S+KG+G W+ M
Sbjct: 61 NDEMRKIGVSQAKTETIKRIAEAYLKRSITDSKLHKLEDSDVLKLLCSIKGVGPWTAEMV 120
Query: 206 MIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSWYMW 261
+IF+L + D + DL +RK ++ YG+ + +++ + PYR++ SWY+W
Sbjct: 121 LIFALDRWDHFSINDLILRKSVEKHYGISK-DNKKEIQLFLNTYSPYRTILSWYLW 175
>gi|355671209|ref|ZP_09057781.1| hypothetical protein HMPREF9469_00818 [Clostridium citroniae
WAL-17108]
gi|354815761|gb|EHF00352.1| hypothetical protein HMPREF9469_00818 [Clostridium citroniae
WAL-17108]
Length = 212
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 109/203 (53%), Gaps = 6/203 (2%)
Query: 75 HLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGED 134
+L+ KD +L +ID E F ++ SI+ QQ++ KA +I+ + + + GE
Sbjct: 12 YLKKKDKILGQIIDQIGHIEREVRPDLFSAVVYSIIGQQISTKAHNTIWLK-MQMELGEI 70
Query: 135 NILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSV 194
N +++LA +L++ G +Y K Y+ D A K G ++ + ++ D + L+ +
Sbjct: 71 N--TESILAAGRDRLQQFGTTYHKVDYILDFARKVKSGAVNLNHLSQLPDEELIAELSQL 128
Query: 195 KGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRS 254
KGIG W+ M ++F L +PDV GDL + +G+++ Y KE+ + ++ +++ PY S
Sbjct: 129 KGIGVWTSEMILLFCLQRPDVFSYGDLAILRGIRMAYHHKEISRE-RFQKYRQRFSPYCS 187
Query: 255 VGSWYMWRLMEAKGVLPNVAKAA 277
V S Y W + A G +P + A
Sbjct: 188 VASLYFWAV--AGGAIPEMKDYA 208
>gi|425068049|ref|ZP_18471165.1| hypothetical protein HMPREF1311_01206 [Proteus mirabilis WGLW6]
gi|404600432|gb|EKB00867.1| hypothetical protein HMPREF1311_01206 [Proteus mirabilis WGLW6]
Length = 203
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 110/199 (55%), Gaps = 9/199 (4%)
Query: 67 GEVDIALRHLRDKDPLLATLIDAHRPPTFESSRSP--FLSLAKSILYQQLAYKAAKSIYT 124
GE +I+ L+ KD LA +++ R + +P F +L K+I+ QQ++ AA ++
Sbjct: 6 GEKEISF--LKQKDKRLAAVME--RIGEIKRPLTPDLFTALIKNIIEQQISVAAATTVQQ 61
Query: 125 RFVALFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDD 184
R + L +G P + ++S Q +++ G++ RKA Y++ +A+ + L + I M D
Sbjct: 62 RLLTLCDG--IYTPVHIASLSEQDIQQCGMTMRKAGYIKGIADSVINHTLDLDQIPAMSD 119
Query: 185 VTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEE 244
+ L +KGIG W+ M +I SL++PD+L GDL +++G+ LY + L + E
Sbjct: 120 QAVINTLIKLKGIGIWTAEMLLISSLNRPDILSWGDLAIQRGIMRLYRHQSLDRT-RFER 178
Query: 245 VCEKWKPYRSVGSWYMWRL 263
+++ PY S S Y+W L
Sbjct: 179 YRKRYSPYGSTASLYLWAL 197
>gi|394992386|ref|ZP_10385166.1| YfjP [Bacillus sp. 916]
gi|393806718|gb|EJD68057.1| YfjP [Bacillus sp. 916]
Length = 287
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 96/188 (51%), Gaps = 5/188 (2%)
Query: 83 LATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNIL----- 137
L+ L + H + L K I++QQL A ++ RFV F + + +
Sbjct: 100 LSALFEEHAGTPLVLEYGVYNCLMKCIIHQQLNLSFAFTLTERFVHAFGEQKDGVWCYPE 159
Query: 138 PDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGI 197
P + + Q LRE+ S RKA Y D++ +G L+ + + D + K L +++GI
Sbjct: 160 PKTIAGLEYQDLRELQFSMRKAEYAIDISRMIAEGALNLAELTHLSDEDIMKKLITIRGI 219
Query: 198 GAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGS 257
G W+V ++F L +P++ P+ D+G++ ++ + L++ P M +V +W PY S S
Sbjct: 220 GPWTVQNVLMFGLGRPNLFPLADIGLQNAVKRRFALEDKPSKDVMLQVSSEWAPYLSYAS 279
Query: 258 WYMWRLME 265
Y+WR +E
Sbjct: 280 LYLWRSIE 287
>gi|417303590|ref|ZP_12090640.1| HhH-GPD family protein [Rhodopirellula baltica WH47]
gi|327540129|gb|EGF26723.1| HhH-GPD family protein [Rhodopirellula baltica WH47]
Length = 207
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 103/180 (57%), Gaps = 5/180 (2%)
Query: 92 PPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNILPDAVLAVSPQQLRE 151
PP+++ + F +LA+ +L QQ++ ++A+S + L G + P ++ +S QQ R
Sbjct: 24 PPSWQRP-AGFETLARIVLEQQVSLRSAESTLHKLQQLLEGP--LTPRGIVGLSAQQTRA 80
Query: 152 IGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLH 211
GVS +K YL LA DG + + +M D LT+ GIG WS ++++ +L+
Sbjct: 81 CGVSRQKHRYLNQLAADIVDGRFVLDRLPDMSDQEARDQLTARLGIGRWSAEVYLMSALN 140
Query: 212 KPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSWYMWRL-MEAKGVL 270
+PD+LP GDLG+ KG++ L G + + ++W+PYRS+ + +W L ++ +G+L
Sbjct: 141 RPDILPFGDLGLLKGVEELDG-GRYDDFDAIIQRADRWRPYRSMATRLVWALYLDNRGLL 199
>gi|429504306|ref|YP_007185490.1| hypothetical protein B938_03960 [Bacillus amyloliquefaciens subsp.
plantarum AS43.3]
gi|429485896|gb|AFZ89820.1| hypothetical protein B938_03960 [Bacillus amyloliquefaciens subsp.
plantarum AS43.3]
Length = 287
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 96/188 (51%), Gaps = 5/188 (2%)
Query: 83 LATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNIL----- 137
L+ L + H + L K I++QQL A ++ RFV F + + +
Sbjct: 100 LSALFEEHAGTPLVLEYDVYNCLMKCIIHQQLNLSFAFTLTERFVHAFGEQKDGVWCYPE 159
Query: 138 PDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGI 197
P + + Q LRE+ S RKA Y D++ +G L+ + + D + K L +++GI
Sbjct: 160 PKTIAGLEYQDLRELQFSMRKAEYAIDISRMIAEGALNLAELTHLSDEDIMKKLITIRGI 219
Query: 198 GAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGS 257
G W+V ++F L +P++ P+ D+G++ ++ + L++ P M +V +W PY S S
Sbjct: 220 GPWTVQNVLMFGLGRPNLFPLADIGLQNAVKRRFALEDKPSKDVMLQVSSEWAPYLSYAS 279
Query: 258 WYMWRLME 265
Y+WR +E
Sbjct: 280 LYLWRSIE 287
>gi|338998391|ref|ZP_08637065.1| DNA repair protein [Halomonas sp. TD01]
gi|338764708|gb|EGP19666.1| DNA repair protein [Halomonas sp. TD01]
Length = 203
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 103/196 (52%), Gaps = 9/196 (4%)
Query: 69 VDIALRHLRDKDPLLAT---LIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTR 125
++ A+ L DP +A L+ A P + + F S +I+ QQ++ +AA++I +R
Sbjct: 6 IERAMAALAKVDPDIARAYPLVGAPEPRQRDQGFATFFS---TIVSQQISTEAARAIMSR 62
Query: 126 FVALFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDV 185
AL + AV+ V Q LR+ G+S+RK +Y + LAE G S + + + D
Sbjct: 63 VKALLP---ELSAKAVMDVEDQALRDAGLSWRKVAYAKGLAEAELAGTFSADGLALLSDD 119
Query: 186 TMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEV 245
+T ++G G WS ++++FSL + D+ P DL +R L L + P + ++
Sbjct: 120 EAIAAITQLRGFGRWSAEIYLMFSLQRMDIFPADDLALRVALGRLKKREGKPTPKQARQL 179
Query: 246 CEKWKPYRSVGSWYMW 261
E W P+RSVGS ++W
Sbjct: 180 VEHWGPWRSVGSLFLW 195
>gi|416991622|ref|ZP_11938766.1| DNA-3-methyladenine glycosylase II, partial [Burkholderia sp.
TJI49]
gi|325518593|gb|EGC98256.1| DNA-3-methyladenine glycosylase II [Burkholderia sp. TJI49]
Length = 134
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 48/129 (37%), Positives = 74/129 (57%)
Query: 138 PDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGI 197
P V+ + +L G+S RK Y+ DLA+ + G L + MDD + LT ++GI
Sbjct: 1 PQPVIRLGADKLIACGLSKRKTEYILDLAQHFVSGALHVDKWTSMDDEDVIAELTQIRGI 60
Query: 198 GAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGS 257
W+ MF+IF+L +PDVLP+ D G+ + + V Y E + EV W+P+R+V +
Sbjct: 61 SRWTAEMFLIFNLSRPDVLPLDDPGLIRAISVNYFSGEPVTRSEAREVAANWEPWRTVAT 120
Query: 258 WYMWRLMEA 266
WYMWR ++A
Sbjct: 121 WYMWRSLDA 129
>gi|452854778|ref|YP_007496461.1| putative DNA-modified purine glycosidase [Bacillus
amyloliquefaciens subsp. plantarum UCMB5036]
gi|452079038|emb|CCP20791.1| putative DNA-modified purine glycosidase [Bacillus
amyloliquefaciens subsp. plantarum UCMB5036]
Length = 287
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 96/188 (51%), Gaps = 5/188 (2%)
Query: 83 LATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNIL----- 137
L+ L + H + L K I++QQL A ++ RFV F + + +
Sbjct: 100 LSALFEEHAGTPLVLEYDVYNCLMKCIIHQQLNLSFAFTLTERFVHAFGEQKDGVWCYPE 159
Query: 138 PDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGI 197
P + + Q LRE+ S RKA Y D++ +G L+ + + D + K L +++GI
Sbjct: 160 PKTIAGLEYQDLRELQFSMRKAEYAIDISRMIAEGALNLAELTHLSDEDIMKKLIAIRGI 219
Query: 198 GAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGS 257
G W+V ++F L +P++ P+ D+G++ ++ + L++ P M +V +W PY S S
Sbjct: 220 GPWTVQNVLMFGLGRPNLFPLADIGLQNAVKRRFALEDKPSKDVMLQVSSEWAPYLSYAS 279
Query: 258 WYMWRLME 265
Y+WR +E
Sbjct: 280 LYLWRSIE 287
>gi|237799367|ref|ZP_04587828.1| DNA-3-methyladenine glycosylase 1 [Pseudomonas syringae pv. oryzae
str. 1_6]
gi|331022223|gb|EGI02280.1| DNA-3-methyladenine glycosylase 1 [Pseudomonas syringae pv. oryzae
str. 1_6]
Length = 190
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/184 (33%), Positives = 100/184 (54%), Gaps = 9/184 (4%)
Query: 86 LIDAHRPPTFE---SSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNILPDA-- 140
LID H P +++ PF +L K++ YQQL +A ++ R LF G PDA
Sbjct: 2 LID-HVGPCLHPVTAAQDPFQALVKAVAYQQLHARAGDAMIMRLCGLFPGVG--FPDAQE 58
Query: 141 VLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESI-VEMDDVTMFKMLTSVKGIGA 199
++ + Q LR G S K ++ +A +D + D S + M + + + L + G+G
Sbjct: 59 LVDLDEQALRSCGFSASKCRAIKAIAAARSDDRVPDVSAALAMTNDELVERLIQLPGVGR 118
Query: 200 WSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSWY 259
W+V M +I+ L + DV+P D GV +G + LY L+ PG +M + E + PYR++ +WY
Sbjct: 119 WTVEMMLIYGLGQMDVMPASDFGVCEGYRRLYALELKPGHGEMRRLGEGFAPYRTIAAWY 178
Query: 260 MWRL 263
+WR+
Sbjct: 179 LWRV 182
>gi|154685278|ref|YP_001420439.1| hypothetical protein RBAM_008240 [Bacillus amyloliquefaciens FZB42]
gi|154351129|gb|ABS73208.1| YfjP [Bacillus amyloliquefaciens FZB42]
Length = 287
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 96/188 (51%), Gaps = 5/188 (2%)
Query: 83 LATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNIL----- 137
L+ L + H + L K I++QQL A ++ RFV F + + +
Sbjct: 100 LSGLFEEHAGTPLVLEYDVYNCLMKCIIHQQLNLSFAFTLTERFVHAFGEQKDGVWCYPE 159
Query: 138 PDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGI 197
P + + Q LRE+ S RKA Y D++ +G L+ + + D + K L +++GI
Sbjct: 160 PKTITGLEYQDLRELQFSMRKAEYAIDISRMIAEGALNLAELTHLSDEDIMKKLITIRGI 219
Query: 198 GAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGS 257
G W+V ++F L +P++ P+ D+G++ ++ + L++ P M +V +W PY S S
Sbjct: 220 GPWTVQNVLMFGLGRPNLFPLADIGLQNAVKRRFALEDKPSKDVMLQVSSEWAPYLSYAS 279
Query: 258 WYMWRLME 265
Y+WR +E
Sbjct: 280 LYLWRSIE 287
>gi|258568236|ref|XP_002584862.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
gi|237906308|gb|EEP80709.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
Length = 425
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 100/220 (45%), Gaps = 48/220 (21%)
Query: 61 KPLTFKGEV-DIALRHLRDKDPLLATLIDAHRPPTFESSR-----SPFLSLAKSILYQQL 114
+P G + + L HL P L+ +I+ + P F +S PF +L+ I+ QQ+
Sbjct: 162 RPTATTGNILEHGLSHLLRVGPRLSAVIEKYPSPPFSASDLAEEVDPFQALSSGIIGQQV 221
Query: 115 AYKAAKSIYTRFVALF-------------------------------------NGEDNI- 136
+ AAKSI +FVALF N DN+
Sbjct: 222 SGAAAKSIKKKFVALFKKGSAAGDSIGSTGESEKNDYDYGTNTQKSINETGDVNDGDNVS 281
Query: 137 ----LPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLT 192
P+ V+ LR G+S RKA Y+ LAEK+ G LS ++ D + + L
Sbjct: 282 MGFPTPEEVVKCDLATLRTAGLSQRKAEYIHGLAEKFVSGELSARMLLTASDDEVLEKLI 341
Query: 193 SVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYG 232
+V+G+G WSV MF +F L + DV GDLGV++G+ G
Sbjct: 342 AVRGLGKWSVEMFSVFGLKRLDVFSTGDLGVQRGMAAYVG 381
>gi|338814128|ref|ZP_08626172.1| 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase
[Acetonema longum DSM 6540]
gi|337273897|gb|EGO62490.1| 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase
[Acetonema longum DSM 6540]
Length = 258
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 106/203 (52%), Gaps = 6/203 (2%)
Query: 75 HLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGED 134
+LR KD L +I+ ++ F S+ I+ QQ++ KA +I+ R F
Sbjct: 53 YLRQKDKRLGEVIEKIGHIYRKTDTDLFSSVIHHIIGQQISTKAQATIWQRMQNTFG--- 109
Query: 135 NILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSV 194
+ + + +L+ G+++RKA Y+ D ++K DG + I + + L+++
Sbjct: 110 TVTAGKIAITNENELQGFGMTFRKAEYIIDFSQKVQDGSFDLDGIRQKTNEEAIAALSAL 169
Query: 195 KGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRS 254
KGIGAW+ M ++F L +PDV DL +++GL+++Y +++ L E+ ++ PY S
Sbjct: 170 KGIGAWTAEMILLFCLERPDVFSFDDLAIQRGLRMVYHHRKIDRKL-FEKYRRRFSPYCS 228
Query: 255 VGSWYMWRLMEAKGVLPNVAKAA 277
V S Y+W + A G + N+ A
Sbjct: 229 VASLYLWAV--AGGAVENMRDYA 249
>gi|197285098|ref|YP_002150970.1| base excision DNA repair protein [Proteus mirabilis HI4320]
gi|227355524|ref|ZP_03839919.1| base excision DNA repair protein [Proteus mirabilis ATCC 29906]
gi|194682585|emb|CAR42639.1| probable base excision DNA repair protein [Proteus mirabilis
HI4320]
gi|227164320|gb|EEI49209.1| base excision DNA repair protein [Proteus mirabilis ATCC 29906]
Length = 203
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 110/199 (55%), Gaps = 9/199 (4%)
Query: 67 GEVDIALRHLRDKDPLLATLIDAHRPPTFESSRSP--FLSLAKSILYQQLAYKAAKSIYT 124
GE +I+ L+ KD LA +++ R + +P F +L K+I+ QQ++ AA ++
Sbjct: 6 GEKEISF--LKQKDKRLAAVME--RIGEIKRPLTPDLFTALIKNIIEQQISVAAATTVQQ 61
Query: 125 RFVALFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDD 184
R + L +G P + ++S Q +++ G++ RKA Y++ +A+ + L + I M D
Sbjct: 62 RLLTLCDGIYT--PVHIASLSVQDIQQCGMTMRKAGYIKGIADSVINHTLDLDQIPAMSD 119
Query: 185 VTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEE 244
+ L +KGIG W+ M +I SL++PD+L GDL +++G+ LY + L + E
Sbjct: 120 KAVINTLIKLKGIGIWTAEMLLISSLNRPDILSWGDLAIQRGIMRLYRHQSLDRT-RFER 178
Query: 245 VCEKWKPYRSVGSWYMWRL 263
+++ PY S S Y+W L
Sbjct: 179 YRKRYSPYGSTASLYLWAL 197
>gi|452973076|gb|EME72901.1| DNA-glycosylase YfjP [Bacillus sonorensis L12]
Length = 287
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 110/221 (49%), Gaps = 10/221 (4%)
Query: 50 STNSDNSPKIFKPLTFKGEVDIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSI 109
S D +IF+ +K + L H + L+ L + H + L K I
Sbjct: 72 SAMMDEVKRIFQ---WKESLQPVLDHFSKTN--LSQLFEEHAGTPLVLDFHLYHCLMKCI 126
Query: 110 LYQQLAYKAAKSIYTRFVALFNGE-DNI----LPDAVLAVSPQQLREIGVSYRKASYLRD 164
++QQL A ++ RFV F + D + LP+ + + LR + S RK+ Y+ D
Sbjct: 127 IHQQLNLSFAYTLTERFVHAFGEQKDGVWFYPLPETIAGLDYADLRALQFSMRKSEYVID 186
Query: 165 LAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVR 224
+ +G L + + + D + + L ++GIG W+V ++F L +P++ P+ D+G++
Sbjct: 187 TSRMIAEGGLKLDELGSLTDEDIMEKLVKIRGIGPWTVQNVLLFGLGRPNLFPMADIGIQ 246
Query: 225 KGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSWYMWRLME 265
++ +GLK+ P +M E+ +W+PY S S Y+WR +E
Sbjct: 247 NAIKRHFGLKDKPTKEEMLEMSREWQPYLSYASLYLWRSIE 287
>gi|427739927|ref|YP_007059471.1| 3-methyladenine DNA glycosylase [Rivularia sp. PCC 7116]
gi|427374968|gb|AFY58924.1| 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase
[Rivularia sp. PCC 7116]
Length = 208
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 100/190 (52%), Gaps = 3/190 (1%)
Query: 72 ALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFN 131
L+ L +D A +++ P + F L ++IL QQ++ +A + R A +
Sbjct: 15 GLKELATRDKDFAEILNKLGKPAKWEENAGFSGLVRTILGQQVSVNSAAATMKRLSATVS 74
Query: 132 GEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKML 191
+ P+ +L QL+ GVS +K +Y+++LA + L + + D+ T+ L
Sbjct: 75 P---LTPEHLLQFEDAQLKACGVSRQKITYIKELAIAIINNDLDLQKLAVADEETIRNQL 131
Query: 192 TSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKP 251
+KGIG W++ ++++ SL +PD P GDLGV Q L L++ P ++E + E W+P
Sbjct: 132 KPIKGIGDWTIDIYLLMSLQRPDAFPKGDLGVILAYQKLKKLEKRPTPQELEIIAENWRP 191
Query: 252 YRSVGSWYMW 261
+R++ + +W
Sbjct: 192 WRAIAARILW 201
>gi|434399718|ref|YP_007133722.1| HhH-GPD family protein [Stanieria cyanosphaera PCC 7437]
gi|428270815|gb|AFZ36756.1| HhH-GPD family protein [Stanieria cyanosphaera PCC 7437]
Length = 224
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 106/192 (55%), Gaps = 7/192 (3%)
Query: 72 ALRHLRDKDPLLATLIDA-HRPPTFESSRSP-FLSLAKSILYQQLAYKAAKSIYTRFVAL 129
AL++L D LA +++ PP ++ R P F +L + IL QQ++ AAK++Y R L
Sbjct: 17 ALKYLAQSDLDLAQILETLGNPPRWQ--REPGFPTLLQIILEQQVSLAAAKAVYQRLCNL 74
Query: 130 FNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFK 189
+ P+ L++ QL+ IG S +K SY R L+E + ++ + + + ++ +
Sbjct: 75 VQP---LTPENFLSLDEIQLKTIGFSRQKISYGRALSEAIINQQINLDWLADQEETIIRT 131
Query: 190 MLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKW 249
L +KGIG W++ +++ +L DV P GDL V +Q + L P +++E + E W
Sbjct: 132 QLKQIKGIGDWTIDNYLLMALQHWDVFPKGDLAVAIAVQKIKNLPTRPTPIQLELIAEAW 191
Query: 250 KPYRSVGSWYMW 261
+P+R++ + +W
Sbjct: 192 RPWRAIATQILW 203
>gi|402572309|ref|YP_006621652.1| 3-methyladenine DNA glycosylase [Desulfosporosinus meridiei DSM
13257]
gi|402253506|gb|AFQ43781.1| 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase
[Desulfosporosinus meridiei DSM 13257]
Length = 227
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 111/199 (55%), Gaps = 14/199 (7%)
Query: 67 GEVDIALRHLRDKDPLLATLIDA----HRPPTFESSRSPFLSLAKSILYQQLAYKAAKSI 122
GE +I + L+ +DP+L +D +RP + F +L +I+ QQ++ KA +I
Sbjct: 10 GEKEI--QWLKARDPILGAAMDEIGHINRPVIPDM----FTALVNAIVGQQISTKAQVTI 63
Query: 123 YTRFVALFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEM 182
+ R + + I P+ + A+S ++L+ G+S RK Y++++A+ G L+ + M
Sbjct: 64 WNRMLEKCSA---ITPEILRAISAEELQSCGISMRKTLYIKEIADSVQKGSLNLRLLQTM 120
Query: 183 DDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKM 242
D + L+ +KGIG W+ M MIFSL +PDV+ DL + +GL++LY +++ L
Sbjct: 121 SDEEVCLHLSQIKGIGVWTAEMLMIFSLQRPDVMSWYDLAILRGLRMLYHHRKITPQL-F 179
Query: 243 EEVCEKWKPYRSVGSWYMW 261
+ ++ PY +V S Y+W
Sbjct: 180 NKYKRRYSPYATVASLYLW 198
>gi|302679562|ref|XP_003029463.1| hypothetical protein SCHCODRAFT_42997 [Schizophyllum commune H4-8]
gi|300103153|gb|EFI94560.1| hypothetical protein SCHCODRAFT_42997, partial [Schizophyllum
commune H4-8]
Length = 363
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 57/144 (39%), Positives = 84/144 (58%), Gaps = 17/144 (11%)
Query: 101 PFLSLAKSILYQQLAYKAAKSIYTRFVALFN---------GEDNILPDAVLAVSPQ---- 147
PF L QQ+++ AA+SI RF L++ D+ P+A Q
Sbjct: 44 PFRRLTLQRRGQQISWLAARSINHRFRRLYDPTLPEKPTQHSDSRDPEASFPTPAQVANT 103
Query: 148 ---QLREIGVSYRKASY-LRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIGAWSVH 203
LR G+S RKA Y ++DLA ++ DG LS + +++ D + +ML +VKGIG W+V
Sbjct: 104 AIPTLRSAGLSQRKAEYTVQDLARRFADGSLSTDKLLQATDEELAEMLIAVKGIGRWTVD 163
Query: 204 MFMIFSLHKPDVLPVGDLGVRKGL 227
MF +FSL +P++LPVGDLGV++GL
Sbjct: 164 MFAMFSLRRPNILPVGDLGVQRGL 187
Score = 45.4 bits (106), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 28/42 (66%), Gaps = 4/42 (9%)
Query: 230 LYGLKELPGAL----KMEEVCEKWKPYRSVGSWYMWRLMEAK 267
L G K++ GAL +ME + E WKPYRS+G +YMW L E +
Sbjct: 322 LTGKKKIKGALLTPAEMEAMTEAWKPYRSLGVYYMWTLSEGE 363
>gi|418575079|ref|ZP_13139236.1| putative DNA-3-methyladenine glycosidase [Staphylococcus
saprophyticus subsp. saprophyticus KACC 16562]
gi|379326534|gb|EHY93655.1| putative DNA-3-methyladenine glycosidase [Staphylococcus
saprophyticus subsp. saprophyticus KACC 16562]
Length = 221
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 110/193 (56%), Gaps = 4/193 (2%)
Query: 70 DIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRF-VA 128
D ++ L +D LA LI+ ++ P SL +SI+ QQ+ A+SI+ + +A
Sbjct: 10 DACVQTLIKQDATLAHLINQIGDLQIQTRPDPLKSLIRSIIGQQITVAVAQSIFQKLSIA 69
Query: 129 LFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMF 188
+ +D+ + + + +++ +G+S K +Y++++ +G L+ E + +MDD ++
Sbjct: 70 I---DDHWTVNQLSQLRESEMKALGLSQSKINYIQNVLFAVRNGQLNFEQLYKMDDNSVI 126
Query: 189 KMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEK 248
LT +KGIG W+ +F++F+L + ++LP+ D+G+++ Q LY + ++ E+
Sbjct: 127 NALTQIKGIGRWTAEVFLLFTLQRKNILPIYDVGLQRAAQWLYQTTKAERKKQLTICKEQ 186
Query: 249 WKPYRSVGSWYMW 261
W+ S+G++Y+W
Sbjct: 187 WQGCASIGAFYLW 199
>gi|157691536|ref|YP_001485998.1| DNA-3-methyladenine glycosylase II [Bacillus pumilus SAFR-032]
gi|157680294|gb|ABV61438.1| DNA-3-methyladenine glycosylase II [Bacillus pumilus SAFR-032]
Length = 333
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 108/204 (52%), Gaps = 7/204 (3%)
Query: 68 EVDIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFV 127
++D H + + LA++ + H+ + L K I++QQL A + RFV
Sbjct: 130 QLDAVQEHFSETN--LASVFERHKGTPLMLDFHLYHCLMKCIIHQQLNLSFAYELTKRFV 187
Query: 128 ALFNGE-DNI----LPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEM 182
+ + D + LP+ + ++ ++LR++ S RKA Y+ D++++ G L + + E+
Sbjct: 188 HTYGEQIDGVWFDPLPETIASLETEELRKLQFSQRKAEYVIDVSKRIVSGSLCLDELHEL 247
Query: 183 DDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKM 242
D+ + + L ++GIG W+V ++ L +P++ P+ D+G++ ++ + L E P +M
Sbjct: 248 TDLEVEERLLPIRGIGPWTVQNVLMNGLGRPNLFPMADIGIQNAIKRHFDLPEKPTKEEM 307
Query: 243 EEVCEKWKPYRSVGSWYMWRLMEA 266
+ + W PY S S Y+WR +E
Sbjct: 308 AALSKDWTPYLSYASLYLWRSIET 331
>gi|296535256|ref|ZP_06897466.1| base-excision DNA repair protein, partial [Roseomonas cervicalis
ATCC 49957]
gi|296264423|gb|EFH10838.1| base-excision DNA repair protein [Roseomonas cervicalis ATCC 49957]
Length = 208
Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 96/186 (51%), Gaps = 6/186 (3%)
Query: 80 DPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNILPD 139
DP A + A P + S F LA+++L QQ++ +AA +I+ RF AL + P
Sbjct: 15 DPDFAGIEAAAGPLPWRSRPRGFGGLARTVLGQQISNQAAGAIWLRFSAL---PGALEPA 71
Query: 140 AVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIGA 199
+L +S LR G+S K ++LR LAE +G L E + M D L++ +G+G
Sbjct: 72 GLLRLSDDALRGAGLSRPKVAHLRGLAEACLEGRLRLEELPAMGDAEAVAHLSAQRGLGP 131
Query: 200 WSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGS-- 257
W+ + ++F+ +PD+ P GD+ + L G+ P + + W+P+RS+ +
Sbjct: 132 WTAQVHLLFAEDRPDIFPEGDVALAASAAHLKGMPARPSPRALTALSLSWRPWRSLAARL 191
Query: 258 -WYMWR 262
W+ WR
Sbjct: 192 LWHHWR 197
>gi|386713185|ref|YP_006179508.1| DNA-3-methyladenine glycosylase YfjP [Halobacillus halophilus DSM
2266]
gi|384072741|emb|CCG44231.1| DNA-3-methyladenine glycosylase YfjP [Halobacillus halophilus DSM
2266]
Length = 288
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 55/167 (32%), Positives = 92/167 (55%), Gaps = 5/167 (2%)
Query: 104 SLAKSILYQQLAYKAAKSIYTRFVA-LFNGEDNIL----PDAVLAVSPQQLREIGVSYRK 158
L K I++QQL K A ++ TRFV L +D + P+ V V ++LR++ S RK
Sbjct: 122 CLVKVIIHQQLNMKFAHTLSTRFVERLGYQKDGVWFYPEPETVAEVPYEELRKLQFSQRK 181
Query: 159 ASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPV 218
A Y+ D + K +G L E + D + K L ++GIG W+ +++F + + ++LP
Sbjct: 182 AEYVIDASRKIVEGELDLEWLARQADEEVMKHLVKIRGIGPWTAENWLMFGVGRENLLPK 241
Query: 219 GDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSWYMWRLME 265
D+G++ L+ + L++ P +ME E W PY+S S +WR +E
Sbjct: 242 ADIGIQNALKSYFNLEDKPSKEQMESFSESWPPYQSYASLTLWRSIE 288
>gi|410697895|gb|AFV76963.1| HhH-GPD superfamily base excision DNA repair protein [Thermus
oshimai JL-2]
Length = 183
Score = 100 bits (249), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 64/165 (38%), Positives = 95/165 (57%), Gaps = 10/165 (6%)
Query: 101 PFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNILPDAVLAVSPQQLREIGVSYRKAS 160
PF L +SI+ QQL+ KAAK+I R G P+A+LA+ Q LR G+S KA
Sbjct: 29 PFKVLVESIVSQQLSTKAAKTILGRLW----GRVEPSPEALLALPLQALRGAGLSQAKAQ 84
Query: 161 YLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGD 220
LR L+EK +G+L + +DD + L V+G+G W+ MF++F L +PDV PVGD
Sbjct: 85 ALRHLSEKALEGLLV--GLEALDDEGVKARLLQVRGVGPWTAEMFLMFGLRRPDVWPVGD 142
Query: 221 LGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSWYMWRLME 265
LG+ + +G + + + E ++PYRS +WY+WR +E
Sbjct: 143 LGLSRAALRFFGEQ----GRDLRALGEAFRPYRSHLAWYLWRTLE 183
>gi|410944080|ref|ZP_11375821.1| DNA-3-methyladenine glycosylase [Gluconobacter frateurii NBRC
101659]
Length = 216
Score = 100 bits (249), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 98/186 (52%), Gaps = 10/186 (5%)
Query: 96 ESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNI----LPDAVLAVSPQQLRE 151
+ + P+ +L ++I QQL AA+ I+ R L P+ +LA S LR
Sbjct: 30 DDGQDPYDALLRAIAGQQLHGAAARRIFGRLCLLGPAASETGPPPAPEVLLAFSEDILRA 89
Query: 152 IGVSYRKASYLRDLAEKYTDGILSDESIVE-MDDVTMFKMLTSVKGIGAWSVHMFMIFSL 210
G+S K +R +A+ +G++ E + D + + L +++G+G W+V M ++F+L
Sbjct: 90 CGLSASKQIAMRGVAQARLEGLVPTRLEAETLGDEELIQRLVTLRGVGRWTVEMLLMFTL 149
Query: 211 HKPDVLPVGDLGVRKGLQVLYGLKELPGA--LKMEEVCEKWKPYRSVGSWYMWRLM-EAK 267
+PDV+PV D GVR+G + + ++ P LK E C + P+RS +WY WR+ E K
Sbjct: 150 GRPDVMPVDDFGVREGWRRIKKMETAPKPKNLKNETFC--FSPHRSALAWYCWRVAEEGK 207
Query: 268 GVLPNV 273
PN
Sbjct: 208 KAAPNT 213
>gi|350265070|ref|YP_004876377.1| hypothetical protein GYO_1067 [Bacillus subtilis subsp. spizizenii
TU-B-10]
gi|349597957|gb|AEP85745.1| YfjP [Bacillus subtilis subsp. spizizenii TU-B-10]
Length = 287
Score = 100 bits (249), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 111/223 (49%), Gaps = 10/223 (4%)
Query: 50 STNSDNSPKIFKPLTFKGEVDIALRHLRDK--DPLLATLIDAHRPPTFESSRSPFLSLAK 107
T+ D K K + F+ E D L+H+ D L+ + +AH S + + K
Sbjct: 68 ETDQDEMMKEIKRI-FQWEND--LQHVLDHFSKTSLSAIFEAHAGTPLVLDYSVYNCIMK 124
Query: 108 SILYQQLAYKAAKSIYTRFVALFNGEDNIL-----PDAVLAVSPQQLREIGVSYRKASYL 162
I++QQL A ++ RFV F + + + P+ + + Q LR++ S RKA Y
Sbjct: 125 CIIHQQLNLSFAYTLTERFVHAFGEQKDGVWCYPKPETIAELDYQDLRDLQFSMRKAEYT 184
Query: 163 RDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLG 222
D + +G L + M D + K L ++GIG W+V ++F L +P++ P+ D+G
Sbjct: 185 IDTSRMIAEGTLDLSELPNMTDEDIMKKLIKIRGIGPWTVQNVLMFGLGRPNLFPLADIG 244
Query: 223 VRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSWYMWRLME 265
++ ++ + L + P M + ++W+PY S S Y+WR +E
Sbjct: 245 LQNAIKRHFQLDDKPAKDVMLAMSKEWEPYLSYASLYLWRSIE 287
>gi|398309866|ref|ZP_10513340.1| putative DNA-modified purine glycosidase [Bacillus mojavensis
RO-H-1]
Length = 287
Score = 100 bits (248), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 108/221 (48%), Gaps = 7/221 (3%)
Query: 50 STNSDNSPKIFKPLTFKGEVDIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSI 109
+ D +I + ++ ++ L H + L+ + + H S + + K I
Sbjct: 69 TEQEDMMKEIKRIFQWEHDLQHVLEHFSKTN--LSAIFEEHAGTPLVLDYSVYNCIMKCI 126
Query: 110 LYQQLAYKAAKSIYTRFVALFNGEDNIL-----PDAVLAVSPQQLREIGVSYRKASYLRD 164
++QQL A ++ RFV F + + + P+ + A+ Q LR++ S RKA Y D
Sbjct: 127 VHQQLNLSFAYTLTERFVHTFGEQKDGVWCYPKPETIAALDYQDLRDLQFSMRKAEYAID 186
Query: 165 LAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVR 224
+ +G L + +M D + K L ++GIG W+V ++F L +P++ P+ D+G++
Sbjct: 187 TSRMIAEGTLDLSELPQMTDEDIMKKLIKIRGIGPWTVQNVLMFGLGRPNLFPLADIGLQ 246
Query: 225 KGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSWYMWRLME 265
++ + L + P M + +W+PY S S Y+WR +E
Sbjct: 247 NAIKRHFNLDDKPAKDVMLAMSREWEPYLSYASLYLWRSIE 287
>gi|393725534|ref|ZP_10345461.1| DNA-3-methyladenine glycosylase II [Sphingomonas sp. PAMC 26605]
Length = 207
Score = 100 bits (248), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 104/194 (53%), Gaps = 3/194 (1%)
Query: 68 EVDIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFV 127
++ A+ L ++P +A + P S + +L ++I+ QQ++ KAA+S++ +
Sbjct: 7 QLKTAMDELARREPAIAAALARVGYPEPRISARGYATLLRTIIGQQVSTKAAQSVWHKLE 66
Query: 128 ALFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTM 187
+ D+ P V S +QLRE G+S +KA Y R LA T G L ++ E D+ +
Sbjct: 67 GIIGDLDD--PGTVTRASDEQLREAGLSRQKAGYARSLAALVTSGELDLANLPEDDEEAI 124
Query: 188 FKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCE 247
K L +VKGIG WS ++++F+ + D+ P GDL ++ + + G + P + E+ E
Sbjct: 125 AK-LVAVKGIGRWSAEIYLLFAEGRLDIWPAGDLAIQIEIGRILGHETRPSEKLVRELAE 183
Query: 248 KWKPYRSVGSWYMW 261
W+P+R + + W
Sbjct: 184 PWRPHRGAAAVFAW 197
>gi|313681033|ref|YP_004058772.1| hhh-gpd family protein [Oceanithermus profundus DSM 14977]
gi|313153748|gb|ADR37599.1| HhH-GPD family protein [Oceanithermus profundus DSM 14977]
Length = 195
Score = 100 bits (248), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 105/191 (54%), Gaps = 13/191 (6%)
Query: 72 ALRHLRDKDPLLATLIDAHRPPTFESSRSP-FLSLAKSILYQQLAYKAAKSIYTRFVALF 130
AL HL +DP++A LI+ H P + P F SL ++++ QQL+ A++++ R
Sbjct: 12 ALAHL-ARDPVMARLIERHGP--YRWGLHPVFPSLVRAVVGQQLSNAVARTMFRRV---- 64
Query: 131 NGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKM 190
+ P+ +LA+ + LRE+G++ K L LAE +G E + + D
Sbjct: 65 QQATGLEPERLLALGEEGLRELGLARAKGRALVGLAEAQREGYF--EGLEGLPDDVAAAR 122
Query: 191 LTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWK 250
L ++G+G W+ M +IFSL + DV P GDLG+ + + LYGL ++E + E+++
Sbjct: 123 LVRLRGVGPWTAQMVLIFSLGRMDVWPTGDLGMVRQAERLYGLATRA---EVEALGERFR 179
Query: 251 PYRSVGSWYMW 261
P+RS + Y+W
Sbjct: 180 PWRSAAAHYLW 190
>gi|32473455|ref|NP_866449.1| DNA-3-methyladenine glycosidase [Rhodopirellula baltica SH 1]
gi|440715168|ref|ZP_20895723.1| HhH-GPD family protein [Rhodopirellula baltica SWK14]
gi|32398135|emb|CAD78230.1| DNA-3-methyladenine glycosidase [Rhodopirellula baltica SH 1]
gi|436439890|gb|ELP33283.1| HhH-GPD family protein [Rhodopirellula baltica SWK14]
Length = 207
Score = 100 bits (248), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 102/180 (56%), Gaps = 5/180 (2%)
Query: 92 PPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNILPDAVLAVSPQQLRE 151
PP++ + F +LA+ +L QQ++ ++A+S + L G + P ++ +S QQ R
Sbjct: 24 PPSWRRP-AGFETLARIVLEQQVSLRSAESTLHKLQQLLEGP--LTPRGIVRLSAQQTRA 80
Query: 152 IGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLH 211
GVS +K YL LA DG + + M D LT+ GIG WS ++++ +L+
Sbjct: 81 CGVSRQKHRYLNQLAADIVDGRFVLDRLPGMSDQEARDQLTARLGIGRWSAEVYLMSALN 140
Query: 212 KPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSWYMWRL-MEAKGVL 270
+PD+LP GDLG+ KG++ L G + + + ++W+PYRS+ + +W L ++ +G+L
Sbjct: 141 RPDILPFGDLGLLKGVEELDG-GQYDDFDAIIQRADRWRPYRSMATRLVWALYLDNRGLL 199
>gi|423074537|ref|ZP_17063263.1| base excision DNA repair protein, HhH-GPD family
[Desulfitobacterium hafniense DP7]
gi|361854585|gb|EHL06644.1| base excision DNA repair protein, HhH-GPD family
[Desulfitobacterium hafniense DP7]
Length = 198
Score = 100 bits (248), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 103/193 (53%), Gaps = 8/193 (4%)
Query: 73 LRHLRDKDPLLATLIDAHRPPTFESSRSP--FLSLAKSILYQQLAYKAAKSIYTRFVALF 130
+ HL+ +D +L I+ R E +P F +L S++ QQ++ KAA++++ R L
Sbjct: 11 IEHLKTRDKVLGQAIE--RIGMIERGITPDLFEALISSVVSQQISKKAAETVWNRLQTLL 68
Query: 131 NGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKM 190
I + + + ++ G+S RKA Y++ +A G + + + + D + +
Sbjct: 69 G---EISAEKIALADLEAIQGCGMSMRKAGYIKGVAAAAQRGEVDFQELPTLSDEEIIQS 125
Query: 191 LTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWK 250
L+++ G+G W+ M +I SL +PDV+ DL +R+G+ YGL+EL E +K+
Sbjct: 126 LSALPGVGVWTAEMLLIHSLCRPDVVSYRDLAIRRGMMNCYGLEELSKE-TFEHYRKKYS 184
Query: 251 PYRSVGSWYMWRL 263
PY SV S Y+W L
Sbjct: 185 PYGSVASLYLWAL 197
>gi|91775652|ref|YP_545408.1| DNA-3-methyladenine glycosylase II [Methylobacillus flagellatus KT]
gi|91709639|gb|ABE49567.1| DNA-3-methyladenine glycosylase II [Methylobacillus flagellatus KT]
Length = 142
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 48/127 (37%), Positives = 74/127 (58%), Gaps = 1/127 (0%)
Query: 138 PDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESI-VEMDDVTMFKMLTSVKG 196
P A+LA QLR G S RK +Y+ LA+ G + D + + M+D + LT++ G
Sbjct: 9 PAALLATDVAQLRACGFSGRKITYITGLAQAALAGNIPDHATALAMEDEALITQLTALPG 68
Query: 197 IGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVG 256
IG W+V M ++ +L + D+LPV DLGVR+G + L GL P + ++ W P+RS
Sbjct: 69 IGRWTVEMMLMHTLRRADILPVDDLGVREGFRRLKGLSTAPTPRLLRDIGLAWSPHRSSA 128
Query: 257 SWYMWRL 263
+WY+W +
Sbjct: 129 AWYLWHV 135
>gi|386757469|ref|YP_006230685.1| DNA-modified purine glycosidase [Bacillus sp. JS]
gi|384930751|gb|AFI27429.1| DNA-modified purine glycosidase [Bacillus sp. JS]
Length = 287
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 97/188 (51%), Gaps = 5/188 (2%)
Query: 83 LATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNIL----- 137
L+ + + H S + + K I++QQL A ++ RFV F + + +
Sbjct: 100 LSAIFEEHAGTPLVLDYSVYNCMMKCIIHQQLNLSFAYTLTERFVHAFGEQKDGVWCYPK 159
Query: 138 PDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGI 197
P+ + + Q LR++ S RKA Y D ++ +G LS + M D + K L ++GI
Sbjct: 160 PETIAKLDYQDLRDLQFSMRKAEYTIDTSKMIAEGTLSLSELTHMADEDIMKKLIKIRGI 219
Query: 198 GAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGS 257
G W+V ++F L +P++ P+ D+G++ ++ + L + P M + ++W+PY S S
Sbjct: 220 GPWTVQNVLMFGLGRPNLFPLADIGLQNAIKRHFQLDDKPAKDVMLAMSKEWEPYLSYAS 279
Query: 258 WYMWRLME 265
Y+WR +E
Sbjct: 280 LYLWRSIE 287
>gi|238794017|ref|ZP_04637635.1| Methylated-DNA--protein-cysteine methyltransferase [Yersinia
intermedia ATCC 29909]
gi|238726649|gb|EEQ18185.1| Methylated-DNA--protein-cysteine methyltransferase [Yersinia
intermedia ATCC 29909]
Length = 201
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 102/197 (51%), Gaps = 6/197 (3%)
Query: 67 GEVDIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRF 126
GE +I HL+ +D +A I+ T S F +L ++I+ QQ++ KAA ++ R
Sbjct: 6 GETEI--NHLKRRDKKMAAAIERLGMITRPLSPDLFAALIRNIVDQQISVKAALTVNARL 63
Query: 127 VALFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVT 186
+ L + P V A S + ++ G++ +KA Y++ A+ +G L +I + D
Sbjct: 64 LTLLGA---VTPITVAAASVEAIQGCGMTMKKAGYIKGAADAALNGSLDLSAISLLPDND 120
Query: 187 MFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVC 246
+ L+++ G+G W+ M +I SL +PDV+ GDL +R+G+ LYG K LP
Sbjct: 121 VIAQLSNLSGVGIWTAEMLLISSLARPDVVSWGDLAIRRGMMNLYGHKTLPRERFERYRR 180
Query: 247 EKWKPYRSVGSWYMWRL 263
PY + S Y+W L
Sbjct: 181 RY-TPYGTTASLYLWAL 196
>gi|357976727|ref|ZP_09140698.1| HhH-GPD family protein [Sphingomonas sp. KC8]
Length = 226
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 86/160 (53%), Gaps = 3/160 (1%)
Query: 102 FLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNILPDAVLAVSPQQLREIGVSYRKASY 161
+ +L ++I+ QQ++ AA +++ R A + P A++ S + LR G+S +K+ Y
Sbjct: 54 YETLLRTIVGQQVSVHAANAVWARLDAALGSATD--PAALIGASDETLRAAGLSRQKSGY 111
Query: 162 LRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDL 221
R LA+ G L D + + DD L +KGIG WS ++++F+ + DV P GDL
Sbjct: 112 ARSLADHVLSGRL-DLAALPDDDEAAITQLVDIKGIGRWSAEIYLLFAEGRSDVWPAGDL 170
Query: 222 GVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSWYMW 261
V+ + L GL E P K E+ E W+P+R + + W
Sbjct: 171 AVQIEVGRLMGLDERPSEKKTRELAEAWRPHRGAAAIFTW 210
>gi|295659628|ref|XP_002790372.1| hypothetical protein PAAG_07671 [Paracoccidioides sp. 'lutzii'
Pb01]
gi|226281824|gb|EEH37390.1| hypothetical protein PAAG_07671 [Paracoccidioides sp. 'lutzii'
Pb01]
Length = 266
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/138 (37%), Positives = 75/138 (54%), Gaps = 12/138 (8%)
Query: 138 PDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGI 197
P V A LR G+S RKA Y++ LAEK+ G LS +++ D + + L +V+G+
Sbjct: 120 PAQVAACGVATLRTAGLSQRKAEYIQGLAEKFASGELSAHMLLQASDEEVLEKLIAVRGL 179
Query: 198 GAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLK----ELPGALKMEEVCEK----- 248
G WSV MF F L + DV GDLGV++G+ G + G+ K + + EK
Sbjct: 180 GRWSVEMFECFGLKRMDVFSTGDLGVQRGMATFVGRDVSKLKAKGSGKFKYMSEKEMLEI 239
Query: 249 ---WKPYRSVGSWYMWRL 263
+ PYRS+ WYMWR+
Sbjct: 240 AAPFSPYRSLLMWYMWRI 257
>gi|91762686|ref|ZP_01264651.1| DNA-3-methyladenine glycosylase I [Candidatus Pelagibacter ubique
HTCC1002]
gi|91718488|gb|EAS85138.1| DNA-3-methyladenine glycosylase I [Candidatus Pelagibacter ubique
HTCC1002]
Length = 211
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 109/196 (55%), Gaps = 5/196 (2%)
Query: 70 DIALRHLRDKDPLLATLIDAHRPPT---FESSRSPFLSLAKSILYQQLAYKAAKSIYTRF 126
+ A ++L +KD ++++LI+ ++ P+ S + F SL KSI+ QQ++ AA S++
Sbjct: 9 NTAKKYLSNKDKVMSSLINKYKSPSEAVLTSRKDIFFSLCKSIIGQQISVAAANSVF--L 66
Query: 127 VALFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVT 186
++ I V +S QL+ G+S +K ++ LA++ D + I +M D
Sbjct: 67 KFKKKCKNKINAKTVSKLSSVQLKSCGLSGQKVKGIKSLAKQILDKSFNPRLIPKMSDEE 126
Query: 187 MFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVC 246
L+ ++ IG WS M ++F+ ++ ++ P+ D+G+ +G+ Y K LP ++ +
Sbjct: 127 AIIYLSQLRQIGRWSAEMILLFTYNRSNIWPIQDIGLLRGISKNYKKKYLPPESYVKLLN 186
Query: 247 EKWKPYRSVGSWYMWR 262
+++ PY SV +WY+WR
Sbjct: 187 KRFSPYCSVATWYLWR 202
>gi|310827698|ref|YP_003960055.1| DNA-3-methyladenine glycosylase II [Eubacterium limosum KIST612]
gi|308739432|gb|ADO37092.1| DNA-3-methyladenine glycosylase II [Eubacterium limosum KIST612]
Length = 224
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 101/202 (50%), Gaps = 6/202 (2%)
Query: 72 ALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFN 131
A +L+ KD L +I+ + F S+ I+ QQ++ KA +I+ R + +
Sbjct: 9 ATDYLKQKDKKLGKVIEKIGMIERAADTDLFASVVHHIVGQQISTKAQATIWQR---IND 65
Query: 132 GEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKML 191
G + D +L ++L+ G+S+RKA+Y+ D AEK G E I + D L
Sbjct: 66 GLGTLNADVILDAGIERLQAFGISFRKAAYITDFAEKVKTGAFDLEGIWDKSDEEAIASL 125
Query: 192 TSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKP 251
S++GIG W+ M ++F + + +V DL +R+GL+++Y +E+ P
Sbjct: 126 VSLRGIGVWTAEMILLFCMERQNVFSYDDLAIRRGLRMVYHHREIDRERFERYRRRY-SP 184
Query: 252 YRSVGSWYMWRLMEAKGVLPNV 273
Y SV S Y+W + A G +P +
Sbjct: 185 YCSVASLYLWAV--AGGAVPEM 204
>gi|170757241|ref|YP_001780275.1| methylated-DNA--protein-cysteine methyltransferase [Clostridium
botulinum B1 str. Okra]
gi|429244267|ref|ZP_19207735.1| methylated-DNA--protein-cysteine methyltransferase [Clostridium
botulinum CFSAN001628]
gi|169122453|gb|ACA46289.1| methylated-dna--protein-cysteine methyltransferase [Clostridium
botulinum B1 str. Okra]
gi|428758708|gb|EKX81112.1| methylated-DNA--protein-cysteine methyltransferase [Clostridium
botulinum CFSAN001628]
Length = 218
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 112/200 (56%), Gaps = 10/200 (5%)
Query: 76 LRDKDPLLATLID--AHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGE 133
L+ +D LL ID H +S F S+ I+ QQ++ +A +I+ R L +
Sbjct: 13 LKSRDELLGAAIDRIGHIYRAVDSD--LFSSVVHHIIGQQISTRAQATIWKR---LEDRL 67
Query: 134 DNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTS 193
+ + DA+ ++ ++L+ +G++++KA Y++ A+K + E++ + D + K L++
Sbjct: 68 EIVDADAICSLELEELQRLGMTFKKAEYIKGFAQKVKNKKFDVEALNNLPDSEVIKELSA 127
Query: 194 VKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYR 253
+KGIG W+ M +IF + +PD++ GDL +++G+++LY + + K + ++ PY
Sbjct: 128 LKGIGIWTAGMIIIFCMQRPDIISFGDLAIQRGMRMLYHHRSIHRK-KFTKYARRYSPYG 186
Query: 254 SVGSWYMWRLMEAKGVLPNV 273
+V Y+W + A G +P +
Sbjct: 187 TVAGLYLWAI--AGGAIPEM 204
>gi|392570362|gb|EIW63535.1| DNA glycosylase [Trametes versicolor FP-101664 SS1]
Length = 458
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/189 (38%), Positives = 98/189 (51%), Gaps = 26/189 (13%)
Query: 63 LTFKGEVDIALRHLRDKDPLLATLIDAHRPPTFE--SSRSPF-LSLAKSILYQQLAYKAA 119
LTF E A RHL DP + + FE PF L++ QQ+++KAA
Sbjct: 98 LTFSFEE--AKRHLVRVDPRFDDVFRRVKCRPFEHLERVDPFRLTVGARARGQQISWKAA 155
Query: 120 KSIYTRFVALFN---------GEDNILPDA--VLAVSPQQLREIGVSYRKASYLRDLAEK 168
SI +FV LF+ + N P A V+ LR G+S RKA Y+ DLA +
Sbjct: 156 ASITHKFVRLFDPSLPESLADSKSNFFPSAHQVITKDIATLRSAGLSGRKAEYVLDLAGR 215
Query: 169 YTDGILSDESIVEMDDVTMFKMLTSVKGIGAWS-----VHMFMIFSLHKPDVLPVG---- 219
+ DG LS ++ DD ++KML V+GIG S V MF +FSL +PD+LPVG
Sbjct: 216 FADGRLSTRKLLLADDEELYKMLIEVRGIGRLSLTRATVDMFAMFSLRRPDILPVGKSSR 275
Query: 220 -DLGVRKGL 227
DLGV+KG+
Sbjct: 276 WDLGVQKGM 284
Score = 42.0 bits (97), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 26/36 (72%), Gaps = 4/36 (11%)
Query: 234 KELPGAL----KMEEVCEKWKPYRSVGSWYMWRLME 265
K++ GAL +ME++ E W+PYRS+G +YMW L E
Sbjct: 420 KKVKGALLTPKEMEDLAECWQPYRSLGVYYMWALAE 455
>gi|89894825|ref|YP_518312.1| hypothetical protein DSY2079 [Desulfitobacterium hafniense Y51]
gi|219669264|ref|YP_002459699.1| HhH-GPD family protein [Desulfitobacterium hafniense DCB-2]
gi|89334273|dbj|BAE83868.1| hypothetical protein [Desulfitobacterium hafniense Y51]
gi|219539524|gb|ACL21263.1| HhH-GPD family protein [Desulfitobacterium hafniense DCB-2]
Length = 198
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 103/193 (53%), Gaps = 8/193 (4%)
Query: 73 LRHLRDKDPLLATLIDAHRPPTFESSRSP--FLSLAKSILYQQLAYKAAKSIYTRFVALF 130
+ HL+ +D +L I+ R E +P F +L S++ QQ++ KAA++++ R L
Sbjct: 11 IEHLKTRDKVLGQAIE--RIGMIERGITPDLFEALISSVVSQQISKKAAETVWNRLQTLL 68
Query: 131 NGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKM 190
I + + + ++ G+S RKA Y++ +A G + + + + D + +
Sbjct: 69 G---EISAEKIALADLEAIQGCGMSMRKAGYIKGVAAAAQRGEVDFQELPTLSDEEIIQS 125
Query: 191 LTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWK 250
L+++ G+G W+ M +I SL +PDV+ DL +R+G+ YGL+EL E +K+
Sbjct: 126 LSALPGVGVWTAEMLLIHSLCRPDVVSYRDLAIRRGMMNCYGLEELSKE-TFEHYRKKYS 184
Query: 251 PYRSVGSWYMWRL 263
PY SV S Y+W +
Sbjct: 185 PYGSVASLYLWAM 197
>gi|418323348|ref|ZP_12934628.1| base excision DNA repair protein, HhH-GPD family [Staphylococcus
pettenkoferi VCU012]
gi|365229890|gb|EHM71016.1| base excision DNA repair protein, HhH-GPD family [Staphylococcus
pettenkoferi VCU012]
Length = 208
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 105/194 (54%), Gaps = 6/194 (3%)
Query: 70 DIALRHLRDKDPLLATLIDAHRPPTFESSRSPF--LSLAKSILYQQLAYKAAKSIYTRFV 127
D ++ L + D ++ LI+ R E + P+ SL +SI+ QQ++ KAA++I+ R
Sbjct: 11 DNRVQKLAENDKVMGRLIE--RIGDVERALRPYPLKSLVRSIVGQQISVKAAETIFGRLK 68
Query: 128 ALFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTM 187
N E I A ++ + +EIG+S K Y+ +L E + L E + + + +
Sbjct: 69 EKINDEWTIA--AFKKLTEEDCKEIGLSRSKQKYIFNLVEHIDNEELEFEKLDRLSNEEI 126
Query: 188 FKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCE 247
K LT+VKGIG W+ +F+IF++ + +V+PV D+G+++ + LY + G ++E
Sbjct: 127 IKQLTAVKGIGKWTAEVFLIFTMQRENVVPVDDVGLQRAAKRLYNQPDARGKALLKECKA 186
Query: 248 KWKPYRSVGSWYMW 261
W ++G Y+W
Sbjct: 187 TWGDQGTIGCLYLW 200
>gi|443643195|ref|ZP_21127045.1| DNA-3-methyladenine glycosylase II [Pseudomonas syringae pv.
syringae B64]
gi|443283212|gb|ELS42217.1| DNA-3-methyladenine glycosylase II [Pseudomonas syringae pv.
syringae B64]
Length = 203
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 98/175 (56%), Gaps = 10/175 (5%)
Query: 97 SSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNILPD-------AVLAVSPQQL 149
+++ PF +L K++ YQQL +A ++ R ALF D+ L + A++ + Q L
Sbjct: 19 AAQDPFQALVKAVAYQQLHARAGDAMVRRLRALFL--DDSLAEVSFPGAQALVDLDDQAL 76
Query: 150 REIGVSYRKASYLRDLAEKYTDGILSDESI-VEMDDVTMFKMLTSVKGIGAWSVHMFMIF 208
R G S K ++ +A DG++ + S + M + + + L + G+G W+V M +I+
Sbjct: 77 RSCGFSASKCRAIKAIAAARLDGLVPEVSAALAMGNEALVERLIQLPGVGRWTVEMMLIY 136
Query: 209 SLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSWYMWRL 263
L + DV+P D GV +G + LY L+ P +M + E++ PYR++ +WY+WR+
Sbjct: 137 GLGQLDVMPASDFGVCEGYRRLYALQLKPSHRQMARLAERFAPYRTIAAWYLWRV 191
>gi|383642837|ref|ZP_09955243.1| HhH-GPD family protein [Sphingomonas elodea ATCC 31461]
Length = 207
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 91/164 (55%), Gaps = 4/164 (2%)
Query: 99 RSP-FLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNILPDAVLAVSPQQLREIGVSYR 157
R+P + +L ++I+ QQ++ AA +++ R A+ ++ P + A S + LR G+S +
Sbjct: 37 RAPGYATLLRTIVGQQVSVAAATAVWNRLDAVLGDAED--PALLAAASDELLRSAGLSRQ 94
Query: 158 KASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLP 217
K Y R L+E+ T G L D + + +DD LT +KGIG WS ++++F+ +PD+ P
Sbjct: 95 KMGYARSLSEQVTSGAL-DLTALPVDDEEAIAALTRIKGIGRWSAEIYLLFAEGRPDIWP 153
Query: 218 VGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSWYMW 261
GDL V+ + + G E P E E W+P+R + + W
Sbjct: 154 AGDLAVQIEIGRILGHPERPSEKLTREWSETWRPHRGAAAIFAW 197
>gi|329848312|ref|ZP_08263340.1| DNA-3-methyladenine glycosylase 1 [Asticcacaulis biprosthecum C19]
gi|328843375|gb|EGF92944.1| DNA-3-methyladenine glycosylase 1 [Asticcacaulis biprosthecum C19]
Length = 209
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/189 (33%), Positives = 93/189 (49%), Gaps = 3/189 (1%)
Query: 73 LRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNG 132
L HL + DP L L + + S F +L + I+ QQL+ KAA +I R L G
Sbjct: 9 LAHLAEADPKLKPLTERFGHIQYRLRESGFPALLRLIVEQQLSVKAADTIVGR---LHAG 65
Query: 133 EDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLT 192
+ P A+LA LR G+S K +Y R LAE G+ ES+ +D L
Sbjct: 66 LTEVSPQALLAHDVDLLRGYGLSRPKIAYARALAEAIHGGVFDTESLTHLDIEAAADKLL 125
Query: 193 SVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPY 252
++KG+G W+ ++++FS + D+ PVGD+ +R+ L L P E W PY
Sbjct: 126 ALKGVGRWTAEVYLMFSEGRLDLFPVGDIALREALGWLDQRDARPDEKYSAERARIWSPY 185
Query: 253 RSVGSWYMW 261
RSV S +W
Sbjct: 186 RSVASHLLW 194
>gi|374812908|ref|ZP_09716645.1| methylated-DNA--[protein]-cysteine S-methyltransferase [Treponema
primitia ZAS-1]
Length = 216
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/198 (33%), Positives = 109/198 (55%), Gaps = 12/198 (6%)
Query: 66 KGEVDIALRHLRDKDPLLATLID--AHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIY 123
K E+D +L+ +D +L ID H T ++ F S+ I+ QQ++ A K+I+
Sbjct: 7 KKEID----YLKSRDKILGDAIDKIGHIKRTVDTD--LFSSIIHHIIGQQISTAAQKTIW 60
Query: 124 TRFVALFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMD 183
R + GE I DA+ +S ++++ G+++RKA Y++D A K G L I +
Sbjct: 61 ERINSKI-GE--ITVDAITDLSIDEIQKFGMTFRKAEYIKDFANKIKSGELILNDINDKS 117
Query: 184 DVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKME 243
D + L+++KGIG W+ M MIF L +PDVL DL + +GL++LY + + K E
Sbjct: 118 DDEIITYLSALKGIGVWTAEMLMIFCLQRPDVLSYTDLAIHRGLRMLYHHRNIDKK-KFE 176
Query: 244 EVCEKWKPYRSVGSWYMW 261
+ K+ PY +V S Y+W
Sbjct: 177 KYRRKFSPYGTVASLYIW 194
>gi|430756109|ref|YP_007210487.1| hypothetical protein A7A1_0617 [Bacillus subtilis subsp. subtilis
str. BSP1]
gi|430020629|gb|AGA21235.1| Hypothetical protein YfjP [Bacillus subtilis subsp. subtilis str.
BSP1]
Length = 287
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 96/188 (51%), Gaps = 5/188 (2%)
Query: 83 LATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNIL----- 137
L+ + + H S + + K I++QQL A ++ RFV F + + +
Sbjct: 100 LSAIFEEHAGTPLVLDYSVYNCMMKCIIHQQLNLSFAYTLTERFVHAFGEQKDGVWCYPK 159
Query: 138 PDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGI 197
P+ + + Q LR++ S RKA Y D + +G LS + M D + K L ++GI
Sbjct: 160 PETIAELDYQDLRDLQFSMRKAEYTIDTSRMIAEGTLSLSELPHMADEDIMKKLIKIRGI 219
Query: 198 GAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGS 257
G W+V ++F L +P++ P+ D+G++ ++ + L + P M + ++W+PY S S
Sbjct: 220 GPWTVQNILMFGLGRPNLFPLADIGLQNAIKRHFQLDDKPAKDVMLAMSKEWEPYLSYAS 279
Query: 258 WYMWRLME 265
Y+WR +E
Sbjct: 280 LYLWRSIE 287
>gi|321314529|ref|YP_004206816.1| putative DNA-modified purine glycosidase [Bacillus subtilis BSn5]
gi|428278285|ref|YP_005560020.1| hypothetical protein BSNT_01337 [Bacillus subtilis subsp. natto
BEST195]
gi|291483242|dbj|BAI84317.1| hypothetical protein BSNT_01337 [Bacillus subtilis subsp. natto
BEST195]
gi|320020803|gb|ADV95789.1| putative DNA-modified purine glycosidase [Bacillus subtilis BSn5]
Length = 287
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 96/188 (51%), Gaps = 5/188 (2%)
Query: 83 LATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNIL----- 137
L+ + + H S + + K I++QQL A ++ RFV F + + +
Sbjct: 100 LSAIFEEHAGTPLVLDYSVYNCMMKCIIHQQLNLSFAYTLTERFVHAFGEQKDGVWCYPK 159
Query: 138 PDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGI 197
P+ + + Q LR++ S RKA Y D + +G LS + M D + K L ++GI
Sbjct: 160 PETIAELDYQDLRDLQFSMRKAEYTIDTSRMIAEGTLSLSELPHMADEDIMKKLIKIRGI 219
Query: 198 GAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGS 257
G W+V ++F L +P++ P+ D+G++ ++ + L + P M + ++W+PY S S
Sbjct: 220 GPWTVQNILMFGLGRPNLFPLADIGLQNAIKRHFQLDDKPAKDVMLAMSKEWEPYLSYAS 279
Query: 258 WYMWRLME 265
Y+WR +E
Sbjct: 280 LYLWRSIE 287
>gi|392570356|gb|EIW63529.1| DNA glycosylase [Trametes versicolor FP-101664 SS1]
Length = 460
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/184 (38%), Positives = 97/184 (52%), Gaps = 22/184 (11%)
Query: 63 LTFKGEVDIALRHLRDKDPLLATLIDAHRPPTFE--SSRSPF-LSLAKSILYQQLAYKAA 119
LTF E A RHL DP + + FE PF L++ QQ+++KAA
Sbjct: 98 LTFSFEE--ARRHLVRVDPRFEDVFRRVKCRPFEHLERVDPFRLTVGARARGQQISWKAA 155
Query: 120 KSIYTRFVALFN---------GEDNILPDA--VLAVSPQQLREIGVSYRKASYLRDLAEK 168
SI +FV LF+ + N P A V+ LR G+S RKA Y+ DLA +
Sbjct: 156 ASITHKFVRLFDPSLPESLADSKSNFFPSAHQVITKDIATLRSAGLSGRKAEYVLDLAGR 215
Query: 169 YTDGILSDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVG-----DLGV 223
+ DG LS ++ DD ++KML V+GIG + MF +FSL +PD+LPVG DLGV
Sbjct: 216 FADGRLSTRKLLLADDEELYKMLIEVRGIGR-VIDMFAMFSLRRPDILPVGKSSRWDLGV 274
Query: 224 RKGL 227
+KG+
Sbjct: 275 QKGM 278
Score = 42.0 bits (97), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 26/36 (72%), Gaps = 4/36 (11%)
Query: 234 KELPGAL----KMEEVCEKWKPYRSVGSWYMWRLME 265
K++ GAL +ME++ E W+PYRS+G +YMW L E
Sbjct: 422 KKVKGALLTPKEMEDLAECWQPYRSLGVYYMWALAE 457
>gi|392394216|ref|YP_006430818.1| HhH-GPD superfamily base excision DNA repair protein
[Desulfitobacterium dehalogenans ATCC 51507]
gi|390525294|gb|AFM01025.1| HhH-GPD superfamily base excision DNA repair protein
[Desulfitobacterium dehalogenans ATCC 51507]
Length = 197
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 103/193 (53%), Gaps = 8/193 (4%)
Query: 73 LRHLRDKDPLLATLIDAHRPPTFESSRSP--FLSLAKSILYQQLAYKAAKSIYTRFVALF 130
+ +L+ +D +L I+ R E +P F +L S++ QQ++ KAA++++ R L
Sbjct: 10 IEYLKTRDEVLGQAIE--RMGMIEREVTPNLFKALISSVVSQQISKKAAETVWNRLQTLL 67
Query: 131 NGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKM 190
NI + ++ + ++ G+S RKA Y++ +A G + + + D +
Sbjct: 68 G---NISAEEIVLADLKAIQGCGMSTRKAGYIKGIAAAAQRGEVDFHKLHTLSDEEIIHS 124
Query: 191 LTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWK 250
L+++ G+G W+ M +IFSL +PDV+ DL +R+G+ Y L+EL E +K+
Sbjct: 125 LSALPGVGVWTAEMLLIFSLCRPDVVSYRDLAIRRGMMNCYVLEELSKG-TFEHYRKKYS 183
Query: 251 PYRSVGSWYMWRL 263
PY SV S Y+W +
Sbjct: 184 PYGSVASLYLWAM 196
>gi|238764894|ref|ZP_04625834.1| Methylated-DNA--protein-cysteine methyltransferase [Yersinia
kristensenii ATCC 33638]
gi|238696913|gb|EEP89690.1| Methylated-DNA--protein-cysteine methyltransferase [Yersinia
kristensenii ATCC 33638]
Length = 202
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 103/199 (51%), Gaps = 10/199 (5%)
Query: 67 GEVDIALRHLRDKDPLLATLIDAHRPPTFESSRSP--FLSLAKSILYQQLAYKAAKSIYT 124
GE +I HL+ +D +A I+ R SP F +L ++I+ QQ++ KAA ++
Sbjct: 6 GETEI--NHLKQRDKKMAVAIE--RIGMIARPLSPDLFAALIRNIVDQQISVKAALTVNA 61
Query: 125 RFVALFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDD 184
R + L ++ P V A + + ++ G++ RKA Y++ A+ G L +I ++ D
Sbjct: 62 RLLTLLG---SVTPLTVAATAIETIQGCGMTMRKAGYIKGAADAALSGSLDLSAISQLPD 118
Query: 185 VTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEE 244
+ L+++ G+G W+ M +I SL +PD+L GDL +R+G+ LY K LP
Sbjct: 119 NEVISQLSNLNGVGIWTAEMLLISSLSRPDILSWGDLAIRRGMMNLYRHKTLPRERFERY 178
Query: 245 VCEKWKPYRSVGSWYMWRL 263
PY + S Y+W L
Sbjct: 179 RRRY-APYGTTASLYLWAL 196
>gi|254468232|ref|ZP_05081638.1| DNA-3-methyladenine glycosylase 1 [beta proteobacterium KB13]
gi|207087042|gb|EDZ64325.1| DNA-3-methyladenine glycosylase 1 [beta proteobacterium KB13]
Length = 201
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 91/162 (56%), Gaps = 5/162 (3%)
Query: 104 SLAKSILYQQLAYKAAKSIYTRFVALFNGEDNILP-DAVLAVSPQQLREIGVSYRKASYL 162
S+ KS+ +QQL KAA +IY RF+ LFN N+ P + + + L IG+S +KA +
Sbjct: 42 SIIKSVFFQQLHPKAASTIYQRFLDLFN---NVFPTEQDIIKNKDLLSSIGLSNQKAQTI 98
Query: 163 RDLAEKYTDGILSDES-IVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDL 221
+A+ Y + +E I+ ++ + + T +KG+G W+V M +IF+ +PD++P DL
Sbjct: 99 LSIADGYLKQFIPNEKKIMLLNGQEIIEQFTQIKGVGVWTVQMMLIFNQGQPDIMPSSDL 158
Query: 222 GVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSWYMWRL 263
+RK L ++ + E PYR++ +WY+W++
Sbjct: 159 AIRKKYSFFKQRDCLITPTQLIKETEYLSPYRTIAAWYLWQI 200
>gi|384174480|ref|YP_005555865.1| DNA-3-methyladenine glycosylase [Bacillus subtilis subsp. subtilis
str. RO-NN-1]
gi|349593704|gb|AEP89891.1| DNA-3-methyladenine glycosylase [Bacillus subtilis subsp. subtilis
str. RO-NN-1]
Length = 287
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 96/188 (51%), Gaps = 5/188 (2%)
Query: 83 LATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNIL----- 137
L+ + + H S + + K I++QQL A ++ RFV F + + +
Sbjct: 100 LSAIFEEHAGTPLVLDYSVYNCMMKCIIHQQLNLSFAYTLTERFVHAFGEQKDGVWCYPK 159
Query: 138 PDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGI 197
P+ + + Q LR++ S RKA Y D + +G LS + M D + K L ++GI
Sbjct: 160 PETIAELDYQDLRDLQFSMRKAEYTIDTSRMIAEGTLSLSELPHMADEDIMKKLIKIRGI 219
Query: 198 GAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGS 257
G W+V ++F L +P++ P+ D+G++ ++ + L + P M + ++W+PY S S
Sbjct: 220 GPWTVQNVLMFGLGRPNLFPLADIGLQNAIKRHFQLDDKPAKDVMLAMSKEWEPYLSYAS 279
Query: 258 WYMWRLME 265
Y+WR +E
Sbjct: 280 LYLWRSIE 287
>gi|226355055|ref|YP_002784795.1| DNA-3-methyladenine glycosidase II [Deinococcus deserti VCD115]
gi|226317045|gb|ACO45041.1| DNA-3-methyladenine glycosidase II [Deinococcus deserti VCD115]
Length = 216
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 61/191 (31%), Positives = 101/191 (52%), Gaps = 11/191 (5%)
Query: 72 ALRHLRDKDPLLATLIDAHRP-PTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALF 130
AL HL +P++A LI + P F + PF +L +++ QQL+ KAA IY R V
Sbjct: 22 ALTHL-SMEPVMAELIALNGELPVFSPTPDPFGTLVRNVTGQQLSVKAADRIYARLVEQL 80
Query: 131 NGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKM 190
I +LA + LR +G+S+ K ++ +A G + + + D + +
Sbjct: 81 G---TISAPNILATTGDDLRAVGLSWAKVRTIQAIAGAAHSGQVDFAHLSSLPDEEIIRE 137
Query: 191 LTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWK 250
L + GIG W+V MF++F+L +P+V +GDL +R+ L+ + + P A EV W
Sbjct: 138 LVPLPGIGRWTVEMFLMFALARPNVFSMGDLALRQHLERRH--PDQPAA----EVLALWA 191
Query: 251 PYRSVGSWYMW 261
PYR++ + Y+W
Sbjct: 192 PYRTLAARYIW 202
>gi|384918971|ref|ZP_10019035.1| HhH-GPD [Citreicella sp. 357]
gi|384467165|gb|EIE51646.1| HhH-GPD [Citreicella sp. 357]
Length = 209
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 61/186 (32%), Positives = 95/186 (51%), Gaps = 8/186 (4%)
Query: 76 LRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDN 135
LR +P A +D P F L +I+ QQ++ +A++I+ R A
Sbjct: 19 LRRAEPRFARALDLTGPLPLRRRPDGFAQLLSAIVSQQVSVASARAIWARLEA----AGM 74
Query: 136 ILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVK 195
+ P VLA S ++LR +G+S +KASY R LA D DDV L +VK
Sbjct: 75 VAPAPVLAASEEELRSLGLSRQKASYARALAGAGID--FDALRGAPTDDV--ISTLVAVK 130
Query: 196 GIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSV 255
GIG W+ ++ +FSL + DV GDL +++ +++L+ L E P + + E W P+RSV
Sbjct: 131 GIGIWTAEIYAMFSLGRADVFAPGDLALQEAVRLLFDLPERPRDKALRTMAEAWSPWRSV 190
Query: 256 GSWYMW 261
+ +W
Sbjct: 191 AARALW 196
>gi|443633609|ref|ZP_21117786.1| putative DNA-modified purine glycosidase [Bacillus subtilis subsp.
inaquosorum KCTC 13429]
gi|443346403|gb|ELS60463.1| putative DNA-modified purine glycosidase [Bacillus subtilis subsp.
inaquosorum KCTC 13429]
Length = 287
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 116/242 (47%), Gaps = 10/242 (4%)
Query: 31 LTTITPITKIAEIPVATAISTNSDNSPKIFKPLTFKGEVDIALRHLRDK--DPLLATLID 88
+ + + AE + T+ D K K + F+ E D L+H+ D L+ + +
Sbjct: 49 IVKVQALGHAAEPDFLVSGETDQDEMMKEIKRI-FQWEHD--LQHVLDHFSKTSLSAIFE 105
Query: 89 AHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNIL-----PDAVLA 143
H S + + K I++QQL A ++ RFV F + + + P+ +
Sbjct: 106 EHAGTPLVLDYSVYNCIMKCIIHQQLNLSFAYTLTERFVHAFGEQKDGVWCYPKPETIAE 165
Query: 144 VSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIGAWSVH 203
+ Q LR++ S RKA Y D + +G L + M D + K L ++GIG W+V
Sbjct: 166 LDYQDLRDLQFSMRKAEYAIDTSRMIAEGTLDLSELPNMTDEDIMKKLIKIRGIGPWTVQ 225
Query: 204 MFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSWYMWRL 263
++F L +P++ P+ D+G++ ++ + L + P M + ++W+PY S S Y+WR
Sbjct: 226 NVLMFGLGRPNLFPLADIGLQNAIKRHFQLDDKPAKDVMLAMSKEWEPYLSYASLYLWRS 285
Query: 264 ME 265
+E
Sbjct: 286 IE 287
>gi|16077868|ref|NP_388682.1| DNA-modified purine glycosidase [Bacillus subtilis subsp. subtilis
str. 168]
gi|221308636|ref|ZP_03590483.1| hypothetical protein Bsubs1_04458 [Bacillus subtilis subsp.
subtilis str. 168]
gi|221312960|ref|ZP_03594765.1| hypothetical protein BsubsN3_04409 [Bacillus subtilis subsp.
subtilis str. NCIB 3610]
gi|221317886|ref|ZP_03599180.1| hypothetical protein BsubsJ_04353 [Bacillus subtilis subsp.
subtilis str. JH642]
gi|221322159|ref|ZP_03603453.1| hypothetical protein BsubsS_04449 [Bacillus subtilis subsp.
subtilis str. SMY]
gi|402775024|ref|YP_006628968.1| DNA-modified purine glycosidase [Bacillus subtilis QB928]
gi|418034103|ref|ZP_12672579.1| hypothetical protein BSSC8_35230 [Bacillus subtilis subsp. subtilis
str. SC-8]
gi|449093508|ref|YP_007425999.1| putative DNA-modified purine glycosidase [Bacillus subtilis XF-1]
gi|452912467|ref|ZP_21961095.1| hhH-GPD superbase excision DNA repair family protein [Bacillus
subtilis MB73/2]
gi|81637509|sp|O31544.1|YFJP_BACSU RecName: Full=Putative DNA-3-methyladenine glycosylase YfjP
gi|2633125|emb|CAB12630.1| putative DNA-modified purine glycosidase [Bacillus subtilis subsp.
subtilis str. 168]
gi|2780400|dbj|BAA24301.1| YfjP [Bacillus subtilis]
gi|351469047|gb|EHA29243.1| hypothetical protein BSSC8_35230 [Bacillus subtilis subsp. subtilis
str. SC-8]
gi|402480209|gb|AFQ56718.1| Putative DNA-modified purine glycosidase [Bacillus subtilis QB928]
gi|407956481|dbj|BAM49721.1| DNA-modified purine glycosidase [Bacillus subtilis BEST7613]
gi|407963752|dbj|BAM56991.1| DNA-modified purine glycosidase [Bacillus subtilis BEST7003]
gi|449027423|gb|AGE62662.1| putative DNA-modified purine glycosidase [Bacillus subtilis XF-1]
gi|452117495|gb|EME07889.1| hhH-GPD superbase excision DNA repair family protein [Bacillus
subtilis MB73/2]
Length = 287
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 96/188 (51%), Gaps = 5/188 (2%)
Query: 83 LATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNIL----- 137
L+ + + H S + + K I++QQL A ++ RFV F + + +
Sbjct: 100 LSAIFEEHAGTPLVLDYSVYNCMMKCIIHQQLNLSFAYTLTERFVHAFGEQKDGVWCYPK 159
Query: 138 PDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGI 197
P+ + + Q LR++ S RKA Y D + +G LS + M D + K L ++GI
Sbjct: 160 PETIAELDYQDLRDLQFSMRKAEYTIDTSRMIAEGTLSLSELPHMADEDIMKKLIKIRGI 219
Query: 198 GAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGS 257
G W+V ++F L +P++ P+ D+G++ ++ + L + P M + ++W+PY S S
Sbjct: 220 GPWTVQNVLMFGLGRPNLFPLADIGLQNAIKRHFQLDDKPAKDVMLAMSKEWEPYLSYAS 279
Query: 258 WYMWRLME 265
Y+WR +E
Sbjct: 280 LYLWRSIE 287
>gi|296331892|ref|ZP_06874357.1| putative DNA-modified purine glycosidase [Bacillus subtilis subsp.
spizizenii ATCC 6633]
gi|305673504|ref|YP_003865176.1| DNA-modified purine glycosidase [Bacillus subtilis subsp.
spizizenii str. W23]
gi|296150970|gb|EFG91854.1| putative DNA-modified purine glycosidase [Bacillus subtilis subsp.
spizizenii ATCC 6633]
gi|305411748|gb|ADM36867.1| putative DNA-modified purine glycosidase [Bacillus subtilis subsp.
spizizenii str. W23]
Length = 313
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 111/223 (49%), Gaps = 10/223 (4%)
Query: 50 STNSDNSPKIFKPLTFKGEVDIALRHLRDK--DPLLATLIDAHRPPTFESSRSPFLSLAK 107
T+ D K K + F+ E D L+H+ D L+ + + H S + + K
Sbjct: 94 ETDQDEMMKEIKRI-FQWEND--LQHVLDHFSKTSLSAIFETHAGTPLVLDYSVYNCIMK 150
Query: 108 SILYQQLAYKAAKSIYTRFVALFNGEDNIL-----PDAVLAVSPQQLREIGVSYRKASYL 162
I++QQL A ++ RFV F + + + P+ + + Q LR++ S RKA Y
Sbjct: 151 CIIHQQLNLSFAYTLTERFVHAFGEQKDGVWCYPKPETIAELDYQDLRDLQFSMRKAEYA 210
Query: 163 RDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLG 222
D + +G L+ + M D + K L ++GIG W+V ++F L +P++ P+ D+G
Sbjct: 211 IDTSRMIAEGTLNLSELPNMTDEDIMKKLIKIRGIGPWTVQNVLMFGLGRPNLFPLADIG 270
Query: 223 VRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSWYMWRLME 265
++ ++ + L + P M + ++W+PY S S Y+WR +E
Sbjct: 271 LQNAIKRHFQLDDKPAKDVMLAMSKEWEPYLSYASLYLWRSIE 313
>gi|398307222|ref|ZP_10510808.1| DNA-modified purine glycosidase [Bacillus vallismortis DV1-F-3]
Length = 287
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 126/271 (46%), Gaps = 16/271 (5%)
Query: 9 DNISQNP-----SASSKITFPPRKIRKLTTITPITKIAEIPVATAISTNSDNSPKIFKPL 63
D +S +P + +I P R I + + + + + + ++ K +
Sbjct: 19 DRLSLDPLNAADKEAREIRVPIRNQAGDVCIVKVQALGQADAPEFLVSGETDQEEMMKEI 78
Query: 64 --TFKGEVDIALRHLRDK--DPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAA 119
F+ E D L+H+ D L+ + + H S + + K I++QQL A
Sbjct: 79 KRIFQWEHD--LQHVLDHFSKTSLSAIFEEHAGTPLILDYSVYNCIMKCIIHQQLNLSFA 136
Query: 120 KSIYTRFVALFNGEDNIL-----PDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGIL 174
++ RFV F + + + P+ + + Q LR++ S RKA Y D + +G L
Sbjct: 137 YTLTERFVHAFGEQKDGVWCYPKPETIADLDYQDLRDLQFSMRKAEYAIDTSRMIAEGTL 196
Query: 175 SDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLK 234
+ +M D + K L ++GIG W+V ++F L +P++ P+ D+G++ ++ + L
Sbjct: 197 DLSKLPDMTDEDIMKKLVKIRGIGPWTVQNVLMFGLGRPNLFPLADIGLQNAIKRHFHLD 256
Query: 235 ELPGALKMEEVCEKWKPYRSVGSWYMWRLME 265
+ P M + ++W+PY S S Y+WR +E
Sbjct: 257 DKPAKDVMLAMSKEWEPYLSYASLYLWRSIE 287
>gi|338741523|ref|YP_004678485.1| HhH-GPD family protein [Hyphomicrobium sp. MC1]
gi|337762086|emb|CCB67921.1| HhH-GPD family protein [Hyphomicrobium sp. MC1]
Length = 238
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 91/161 (56%), Gaps = 5/161 (3%)
Query: 102 FLSLAKSILYQQLAYKAAKSIYTRFV-ALFNGEDNILPDAVLAVSPQQLREIGVSYRKAS 160
F LAK ++ QQL+ ++A +I+TR ALF PDA+ A S L+ +G+S K
Sbjct: 58 FSGLAKIVVGQQLSAQSAAAIWTRVAEALFP----FTPDAIQAASDSDLKRLGLSDGKIR 113
Query: 161 YLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGD 220
LR L D L E++ +D+ + + LT++ GIG W+ ++++F+L + D GD
Sbjct: 114 TLRALTRAVLDDGLDFEALNAANDLVIVERLTAIHGIGPWTADIYILFALGRRDAFAPGD 173
Query: 221 LGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSWYMW 261
L ++ Q + L+ P A ++E + ++W+P R+V + +W
Sbjct: 174 LALQLAAQHHFKLENRPTAEELERIADRWRPARAVAARLLW 214
>gi|22126356|ref|NP_669779.1| DNA repair enzyme [Yersinia pestis KIM10+]
gi|45441376|ref|NP_992915.1| glycosidase [Yersinia pestis biovar Microtus str. 91001]
gi|51596043|ref|YP_070234.1| DNA-3-methyladenine glycosidase [Yersinia pseudotuberculosis IP
32953]
gi|108807206|ref|YP_651122.1| putative glycosidase [Yersinia pestis Antiqua]
gi|108812450|ref|YP_648217.1| glycosidase [Yersinia pestis Nepal516]
gi|145598578|ref|YP_001162654.1| glycosidase [Yersinia pestis Pestoides F]
gi|149366218|ref|ZP_01888253.1| putative glycosidase [Yersinia pestis CA88-4125]
gi|153950825|ref|YP_001401257.1| base excision DNA repair protein [Yersinia pseudotuberculosis IP
31758]
gi|162418266|ref|YP_001606487.1| base excision DNA repair protein [Yersinia pestis Angola]
gi|165925979|ref|ZP_02221811.1| base excision DNA repair protein, HhH-GPD family [Yersinia pestis
biovar Orientalis str. F1991016]
gi|165938766|ref|ZP_02227321.1| base excision DNA repair protein, HhH-GPD family [Yersinia pestis
biovar Orientalis str. IP275]
gi|166010900|ref|ZP_02231798.1| base excision DNA repair protein, HhH-GPD family [Yersinia pestis
biovar Antiqua str. E1979001]
gi|166210564|ref|ZP_02236599.1| base excision DNA repair protein, HhH-GPD family [Yersinia pestis
biovar Antiqua str. B42003004]
gi|167401056|ref|ZP_02306559.1| base excision DNA repair protein, HhH-GPD family [Yersinia pestis
biovar Antiqua str. UG05-0454]
gi|167420209|ref|ZP_02311962.1| base excision DNA repair protein, HhH-GPD family [Yersinia pestis
biovar Orientalis str. MG05-1020]
gi|167425801|ref|ZP_02317554.1| base excision DNA repair protein, HhH-GPD family [Yersinia pestis
biovar Mediaevalis str. K1973002]
gi|167468926|ref|ZP_02333630.1| base excision DNA repair protein, HhH-GPD family [Yersinia pestis
FV-1]
gi|170024612|ref|YP_001721117.1| HhH-GPD family protein [Yersinia pseudotuberculosis YPIII]
gi|186895148|ref|YP_001872260.1| HhH-GPD family protein [Yersinia pseudotuberculosis PB1/+]
gi|218928955|ref|YP_002346830.1| glycosidase [Yersinia pestis CO92]
gi|229896281|ref|ZP_04511451.1| putative glycosidase [Yersinia pestis Pestoides A]
gi|229897217|ref|ZP_04512373.1| putative glycosidase [Yersinia pestis biovar Orientalis str. PEXU2]
gi|229897944|ref|ZP_04513095.1| putative glycosidase [Yersinia pestis biovar Orientalis str. India
195]
gi|229902825|ref|ZP_04517942.1| putative glycosidase [Yersinia pestis Nepal516]
gi|270486613|ref|ZP_06203687.1| base excision DNA repair protein, HhH-GPD family [Yersinia pestis
KIM D27]
gi|294504001|ref|YP_003568063.1| putative glycosidase [Yersinia pestis Z176003]
gi|384122218|ref|YP_005504838.1| putative glycosidase [Yersinia pestis D106004]
gi|384140275|ref|YP_005522977.1| putative glycosidase [Yersinia pestis A1122]
gi|384414923|ref|YP_005624285.1| putative glycosidase [Yersinia pestis biovar Medievalis str. Harbin
35]
gi|420546633|ref|ZP_15044604.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-01]
gi|420551954|ref|ZP_15049363.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-02]
gi|420557509|ref|ZP_15054253.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-03]
gi|420563003|ref|ZP_15059096.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-04]
gi|420568044|ref|ZP_15063670.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-05]
gi|420573747|ref|ZP_15068841.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-06]
gi|420579025|ref|ZP_15073627.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-07]
gi|420584354|ref|ZP_15078463.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-08]
gi|420589561|ref|ZP_15083150.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-09]
gi|420594871|ref|ZP_15087932.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-10]
gi|420600578|ref|ZP_15093024.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-11]
gi|420605973|ref|ZP_15097865.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-12]
gi|420611341|ref|ZP_15102710.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-13]
gi|420616709|ref|ZP_15107436.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-14]
gi|420622038|ref|ZP_15112171.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-15]
gi|420627115|ref|ZP_15116775.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-16]
gi|420632323|ref|ZP_15121470.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-19]
gi|420637437|ref|ZP_15126053.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-25]
gi|420642977|ref|ZP_15131077.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-29]
gi|420648180|ref|ZP_15135815.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-32]
gi|420653826|ref|ZP_15140887.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-34]
gi|420659306|ref|ZP_15145813.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-36]
gi|420664626|ref|ZP_15150575.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-42]
gi|420669535|ref|ZP_15155030.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-45]
gi|420674868|ref|ZP_15159885.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-46]
gi|420680462|ref|ZP_15164949.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-47]
gi|420685745|ref|ZP_15169672.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-48]
gi|420690927|ref|ZP_15174250.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-52]
gi|420696728|ref|ZP_15179333.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-53]
gi|420702247|ref|ZP_15183937.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-54]
gi|420708010|ref|ZP_15188754.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-55]
gi|420713417|ref|ZP_15193598.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-56]
gi|420718845|ref|ZP_15198329.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-58]
gi|420724405|ref|ZP_15203141.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-59]
gi|420730007|ref|ZP_15208155.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-60]
gi|420735048|ref|ZP_15212715.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-61]
gi|420740515|ref|ZP_15217638.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-63]
gi|420746006|ref|ZP_15222388.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-64]
gi|420751656|ref|ZP_15227300.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-65]
gi|420757114|ref|ZP_15231903.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-66]
gi|420762809|ref|ZP_15236672.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-71]
gi|420765762|ref|ZP_15239361.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-72]
gi|420773033|ref|ZP_15245880.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-76]
gi|420778477|ref|ZP_15250714.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-88]
gi|420784040|ref|ZP_15255580.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-89]
gi|420789296|ref|ZP_15260253.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-90]
gi|420794782|ref|ZP_15265197.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-91]
gi|420799833|ref|ZP_15269735.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-92]
gi|420805231|ref|ZP_15274607.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-93]
gi|420810526|ref|ZP_15279387.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-94]
gi|420816182|ref|ZP_15284471.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-95]
gi|420821382|ref|ZP_15289164.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-96]
gi|420826473|ref|ZP_15293722.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-98]
gi|420832250|ref|ZP_15298946.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-99]
gi|420837061|ref|ZP_15303287.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-100]
gi|420842221|ref|ZP_15307964.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-101]
gi|420847868|ref|ZP_15313049.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-102]
gi|420853340|ref|ZP_15317802.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-103]
gi|420858798|ref|ZP_15322500.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-113]
gi|421763314|ref|ZP_16200109.1| putative glycosidase [Yersinia pestis INS]
gi|21959340|gb|AAM86030.1|AE013851_2 putative DNA repair enzyme [Yersinia pestis KIM10+]
gi|45436236|gb|AAS61792.1| putative glycosidase [Yersinia pestis biovar Microtus str. 91001]
gi|51589325|emb|CAH20947.1| putative DNA-3-methyladenine glycosidase [Yersinia
pseudotuberculosis IP 32953]
gi|108776098|gb|ABG18617.1| glycosidase [Yersinia pestis Nepal516]
gi|108779119|gb|ABG13177.1| putative glycosidase [Yersinia pestis Antiqua]
gi|115347566|emb|CAL20475.1| putative glycosidase [Yersinia pestis CO92]
gi|145210274|gb|ABP39681.1| glycosidase [Yersinia pestis Pestoides F]
gi|149292631|gb|EDM42705.1| putative glycosidase [Yersinia pestis CA88-4125]
gi|152962320|gb|ABS49781.1| base excision DNA repair protein, HhH-GPD family [Yersinia
pseudotuberculosis IP 31758]
gi|162351081|gb|ABX85029.1| base excision DNA repair protein, HhH-GPD family [Yersinia pestis
Angola]
gi|165913380|gb|EDR32002.1| base excision DNA repair protein, HhH-GPD family [Yersinia pestis
biovar Orientalis str. IP275]
gi|165922183|gb|EDR39360.1| base excision DNA repair protein, HhH-GPD family [Yersinia pestis
biovar Orientalis str. F1991016]
gi|165990244|gb|EDR42545.1| base excision DNA repair protein, HhH-GPD family [Yersinia pestis
biovar Antiqua str. E1979001]
gi|166207744|gb|EDR52224.1| base excision DNA repair protein, HhH-GPD family [Yersinia pestis
biovar Antiqua str. B42003004]
gi|166961904|gb|EDR57925.1| base excision DNA repair protein, HhH-GPD family [Yersinia pestis
biovar Orientalis str. MG05-1020]
gi|167049445|gb|EDR60853.1| base excision DNA repair protein, HhH-GPD family [Yersinia pestis
biovar Antiqua str. UG05-0454]
gi|167055200|gb|EDR64997.1| base excision DNA repair protein, HhH-GPD family [Yersinia pestis
biovar Mediaevalis str. K1973002]
gi|169751146|gb|ACA68664.1| HhH-GPD family protein [Yersinia pseudotuberculosis YPIII]
gi|186698174|gb|ACC88803.1| HhH-GPD family protein [Yersinia pseudotuberculosis PB1/+]
gi|229680272|gb|EEO76371.1| putative glycosidase [Yersinia pestis Nepal516]
gi|229688985|gb|EEO81050.1| putative glycosidase [Yersinia pestis biovar Orientalis str. India
195]
gi|229693554|gb|EEO83603.1| putative glycosidase [Yersinia pestis biovar Orientalis str. PEXU2]
gi|229701204|gb|EEO89233.1| putative glycosidase [Yersinia pestis Pestoides A]
gi|262361814|gb|ACY58535.1| putative glycosidase [Yersinia pestis D106004]
gi|270335117|gb|EFA45894.1| base excision DNA repair protein, HhH-GPD family [Yersinia pestis
KIM D27]
gi|294354460|gb|ADE64801.1| putative glycosidase [Yersinia pestis Z176003]
gi|320015427|gb|ADV98998.1| putative glycosidase [Yersinia pestis biovar Medievalis str. Harbin
35]
gi|342855404|gb|AEL73957.1| putative glycosidase [Yersinia pestis A1122]
gi|391427290|gb|EIQ89386.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-01]
gi|391428758|gb|EIQ90683.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-02]
gi|391430132|gb|EIQ91887.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-03]
gi|391442555|gb|EIR02944.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-04]
gi|391444266|gb|EIR04506.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-05]
gi|391447276|gb|EIR07210.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-06]
gi|391459646|gb|EIR18408.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-07]
gi|391460753|gb|EIR19425.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-08]
gi|391462717|gb|EIR21195.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-09]
gi|391475753|gb|EIR32927.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-10]
gi|391477370|gb|EIR34401.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-11]
gi|391477802|gb|EIR34786.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-12]
gi|391491799|gb|EIR47319.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-13]
gi|391492770|gb|EIR48190.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-15]
gi|391494791|gb|EIR49981.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-14]
gi|391507311|gb|EIR61149.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-16]
gi|391507758|gb|EIR61557.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-19]
gi|391512432|gb|EIR65749.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-25]
gi|391522971|gb|EIR75323.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-29]
gi|391525632|gb|EIR77754.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-34]
gi|391526456|gb|EIR78479.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-32]
gi|391538705|gb|EIR89491.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-36]
gi|391541246|gb|EIR91805.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-42]
gi|391542761|gb|EIR93168.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-45]
gi|391556472|gb|EIS05551.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-46]
gi|391556899|gb|EIS05945.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-47]
gi|391558066|gb|EIS06986.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-48]
gi|391571614|gb|EIS18940.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-52]
gi|391572309|gb|EIS19555.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-53]
gi|391581057|gb|EIS26984.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-54]
gi|391584414|gb|EIS29954.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-55]
gi|391587528|gb|EIS32679.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-56]
gi|391600208|gb|EIS43759.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-58]
gi|391600964|gb|EIS44432.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-60]
gi|391602549|gb|EIS45827.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-59]
gi|391615484|gb|EIS57244.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-61]
gi|391616270|gb|EIS57946.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-63]
gi|391621686|gb|EIS62702.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-64]
gi|391627497|gb|EIS67695.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-65]
gi|391638017|gb|EIS76870.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-66]
gi|391638580|gb|EIS77367.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-71]
gi|391646738|gb|EIS84449.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-72]
gi|391650650|gb|EIS87909.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-76]
gi|391655715|gb|EIS92421.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-88]
gi|391660083|gb|EIS96278.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-89]
gi|391663955|gb|EIS99739.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-90]
gi|391671064|gb|EIT06043.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-91]
gi|391681516|gb|EIT15468.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-93]
gi|391682985|gb|EIT16799.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-92]
gi|391683781|gb|EIT17524.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-94]
gi|391695386|gb|EIT27961.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-95]
gi|391698869|gb|EIT31123.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-96]
gi|391700159|gb|EIT32280.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-98]
gi|391709575|gb|EIT40734.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-99]
gi|391716177|gb|EIT46649.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-100]
gi|391717010|gb|EIT47415.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-101]
gi|391727966|gb|EIT57119.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-102]
gi|391730489|gb|EIT59315.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-103]
gi|391735288|gb|EIT63451.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-113]
gi|411176215|gb|EKS46235.1| putative glycosidase [Yersinia pestis INS]
Length = 203
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 104/199 (52%), Gaps = 10/199 (5%)
Query: 67 GEVDIALRHLRDKDPLLATLIDAHRPPTFESSRSP--FLSLAKSILYQQLAYKAAKSIYT 124
GE +I HL+ +D +A I+ R E SP F +L ++I+ QQ++ KAA+++ T
Sbjct: 6 GETEI--NHLKRRDKKMAAAIE--RLGMLERPLSPDLFAALIRNIVDQQISVKAAQTVNT 61
Query: 125 RFVALFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDD 184
R L +I P V A S + ++ G++ RKA Y++ A+ +G L I ++ D
Sbjct: 62 RLTLLLG---SITPATVAAASAEAIQRCGMTMRKAGYIKGAADAAINGSLDLSVIAQLPD 118
Query: 185 VTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEE 244
+ L+ + G+G W+ M +I SL +PD++ GDL +R+G+ LY K LP
Sbjct: 119 NEVITQLSRLDGVGVWTAEMLLISSLSRPDIVSWGDLAIRRGMMNLYRHKTLPRERFERY 178
Query: 245 VCEKWKPYRSVGSWYMWRL 263
PY + S Y+W L
Sbjct: 179 RRRY-TPYGTTASLYLWAL 196
>gi|50546795|ref|XP_500867.1| YALI0B14080p [Yarrowia lipolytica]
gi|49646733|emb|CAG83118.1| YALI0B14080p [Yarrowia lipolytica CLIB122]
Length = 360
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 100/191 (52%), Gaps = 20/191 (10%)
Query: 65 FKGEVDIALRHLRDKDPLLATLIDAHRPPTF-------ESSRS------PFLSLAKSILY 111
++ + L+++ D DP L ++ + +F + SR+ F L + I+
Sbjct: 89 YESDFSKGLKYILDVDPSLEDIVHSSEFTSFVKEAATRQESRTNRKCNNCFEHLTRGIIG 148
Query: 112 QQLAYKAAKSIYTRFVALF---NGEDNILP--DAVLAVSPQQLREIGVSYRKASYLRDLA 166
QQ++ AA+SI +F LF ED P +L + LR G+S RKA Y+ L+
Sbjct: 149 QQVSGAAAESILKKFKKLFPVEGSEDGKFPSPQEILDTPTEALRSAGLSGRKAEYITCLS 208
Query: 167 EKYTDGILSDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKG 226
+ DG LSD+ + D + L ++KGIG WS MF++F+L + DV +GDLG+++G
Sbjct: 209 TAFKDGTLSDDWLSTASDDDVVDALVAIKGIGPWSADMFLLFALKRMDVFTLGDLGIQRG 268
Query: 227 LQVLYGLKELP 237
+ V LKE P
Sbjct: 269 VSVY--LKERP 277
>gi|398385662|ref|ZP_10543680.1| HhH-GPD superfamily base excision DNA repair protein [Sphingobium
sp. AP49]
gi|397719931|gb|EJK80493.1| HhH-GPD superfamily base excision DNA repair protein [Sphingobium
sp. AP49]
Length = 209
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 87/171 (50%), Gaps = 10/171 (5%)
Query: 91 RPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNILPDAVLAVSPQQLR 150
R P +E+ L ++I+ QQ++ AA S++ + A + P+A+LA LR
Sbjct: 37 REPGYET-------LLRTIVGQQVSVAAAASVWRKLEAELG--EGCTPEALLARDFDSLR 87
Query: 151 EIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSL 210
G+S +K Y R LAE G L D + DD T L +KGIG WS ++++F+
Sbjct: 88 ACGLSRQKQGYARSLAELVVAGAL-DLHALPRDDETAIAQLVQIKGIGRWSAEIYLLFAE 146
Query: 211 HKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSWYMW 261
+PD+ P GDL V+ + + GL E P + E W+P+RS + W
Sbjct: 147 GRPDIWPAGDLAVQIAVGRILGLAERPSEKLTRTLAEAWRPHRSAAAIMAW 197
>gi|449133720|ref|ZP_21769244.1| HhH-GPD family protein [Rhodopirellula europaea 6C]
gi|448887596|gb|EMB17961.1| HhH-GPD family protein [Rhodopirellula europaea 6C]
Length = 172
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 98/169 (57%), Gaps = 8/169 (4%)
Query: 105 LAKSILYQQLAYKAAKSIYTRFVALFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRD 164
+A+ IL QQ++ ++A+S + + L +G + P ++ +S Q R GVS +K YL
Sbjct: 1 MARIILEQQVSLRSAESTFHKLQQLLDGP--LTPRGIVQLSANQTRACGVSRQKHRYLNQ 58
Query: 165 LAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVR 224
L + DG + + E+ D LT+ GIG WS ++++ +L++PD+LP GDLG+
Sbjct: 59 LGDDIVDGRFDLDRLPELTDRVALAQLTARLGIGRWSAEVYLMSALNRPDILPFGDLGLL 118
Query: 225 KGLQVLYGLK--ELPGALKMEEVCEKWKPYRSVGSWYMWRL-MEAKGVL 270
KG++ L G + + ++ ++W+P+RS+ + +W L ++ +G+L
Sbjct: 119 KGVEELDGGRYDDFEAVIRR---ADQWRPHRSMATRLVWALYLDNRGLL 164
>gi|123442759|ref|YP_001006736.1| putative glycosidase [Yersinia enterocolitica subsp. enterocolitica
8081]
gi|420258145|ref|ZP_14760885.1| putative glycosidase [Yersinia enterocolitica subsp. enterocolitica
WA-314]
gi|122089720|emb|CAL12572.1| putative glycosidase [Yersinia enterocolitica subsp. enterocolitica
8081]
gi|404514454|gb|EKA28249.1| putative glycosidase [Yersinia enterocolitica subsp. enterocolitica
WA-314]
Length = 200
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 100/199 (50%), Gaps = 10/199 (5%)
Query: 67 GEVDIALRHLRDKDPLLATLIDAHRPPTFESSRSP--FLSLAKSILYQQLAYKAAKSIYT 124
GE +I HL+ +D +A I+ R SP F +L ++I+ QQ++ KAA ++
Sbjct: 6 GETEI--NHLKRRDKKMAAAIE--RLGMIARPLSPDLFAALIRNIVDQQISVKAALTVNA 61
Query: 125 RFVALFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDD 184
R + L + P + A + ++ G++ RKA Y++ A DG L +I + D
Sbjct: 62 RLLTLVG---TVTPITIAAAPIEAIQGCGMTMRKAGYIKGAANAALDGSLDLSAISLLPD 118
Query: 185 VTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEE 244
+ L+S+ GIG W+ M +I SL +PDVL GDL +R+G+ LY K LP
Sbjct: 119 NEVITQLSSLNGIGIWTAEMLLISSLSRPDVLSWGDLAIRRGMMNLYRHKTLPRERFERY 178
Query: 245 VCEKWKPYRSVGSWYMWRL 263
PY + S Y+W L
Sbjct: 179 RRRY-TPYGTTASLYLWAL 196
>gi|163759903|ref|ZP_02166987.1| DNA-3-methyladenine glycosidase II protein [Hoeflea phototrophica
DFL-43]
gi|162282861|gb|EDQ33148.1| DNA-3-methyladenine glycosidase II protein [Hoeflea phototrophica
DFL-43]
Length = 233
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 97/194 (50%), Gaps = 3/194 (1%)
Query: 68 EVDIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFV 127
+V+ L L D LA ID P + +LA+ I+ Q ++ +A +++T+
Sbjct: 27 DVEAGLAALAKADSRLAKAIDVAGPVPLRRKPPGYAALAEIIMSQMVSKASANALWTKLE 86
Query: 128 ALFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTM 187
A +I P+A+L +SP+ R G+S KA L ++E G L E + +D
Sbjct: 87 A---AAGDINPEAILRLSPEAHRAAGLSKAKAETLCRVSEAVLAGDLDLEELCAVDGDQA 143
Query: 188 FKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCE 247
++T++KG+G W+ ++++F PDV P GD+ ++ + GL P + + E
Sbjct: 144 IAVMTAIKGVGPWTAEVYLLFCAGHPDVFPAGDVALQNAAAEILGLDARPQPKALYRLTE 203
Query: 248 KWKPYRSVGSWYMW 261
+W P+R V + +W
Sbjct: 204 QWSPWRGVAARLLW 217
>gi|408380687|ref|ZP_11178269.1| DNA-3-methyladenine glycosidase II protein [Agrobacterium
albertimagni AOL15]
gi|407745463|gb|EKF56997.1| DNA-3-methyladenine glycosidase II protein [Agrobacterium
albertimagni AOL15]
Length = 214
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 102/214 (47%), Gaps = 7/214 (3%)
Query: 64 TFKGEVDIA--LRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKS 121
T + E D+A L L DP L + DA P S F LA I+ Q ++ +A +
Sbjct: 3 TIRCEADLAAGLSLLLTCDPRLCPIADACGPLPLRLSPPGFAGLASIIVSQMVSRASADA 62
Query: 122 IYTRFVALFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVE 181
I+ R A+ + L + LA+ P+ + G+S KA L + A+ G + + E
Sbjct: 63 IWRRMTAVLG--NRPLAEDYLALGPELIGTFGLSRGKAQALEEAAKADLGGPFRLDELAE 120
Query: 182 MDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALK 241
M T LT +KGIG W+ ++++F PD+ PVGD+ +R + ++ E P
Sbjct: 121 MPAETAMAALTGLKGIGPWTAEVYLMFCGGHPDIFPVGDVALRISVGDVFFAGERPAPEL 180
Query: 242 MEEVCEKWKPYRSVGS---WYMWRLMEAKGVLPN 272
+ E+ E W P RSV + W + L+ + LP
Sbjct: 181 VAELAEAWAPVRSVAARLFWAHYALITGRTALPR 214
>gi|332161348|ref|YP_004297925.1| putative glycosidase [Yersinia enterocolitica subsp. palearctica
105.5R(r)]
gi|386308855|ref|YP_006004911.1| DNA-3-methyladenine glycosylase II [Yersinia enterocolitica subsp.
palearctica Y11]
gi|418241337|ref|ZP_12867867.1| putative glycosidase [Yersinia enterocolitica subsp. palearctica
PhRBD_Ye1]
gi|433548617|ref|ZP_20504667.1| DNA-3-methyladenine glycosylase II [Yersinia enterocolitica IP
10393]
gi|318605271|emb|CBY26769.1| DNA-3-methyladenine glycosylase II [Yersinia enterocolitica subsp.
palearctica Y11]
gi|325665578|gb|ADZ42222.1| putative glycosidase [Yersinia enterocolitica subsp. palearctica
105.5R(r)]
gi|351779282|gb|EHB21397.1| putative glycosidase [Yersinia enterocolitica subsp. palearctica
PhRBD_Ye1]
gi|431791177|emb|CCO67707.1| DNA-3-methyladenine glycosylase II [Yersinia enterocolitica IP
10393]
Length = 200
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 100/199 (50%), Gaps = 10/199 (5%)
Query: 67 GEVDIALRHLRDKDPLLATLIDAHRPPTFESSRSP--FLSLAKSILYQQLAYKAAKSIYT 124
GE +I HL+ +D +A I+ R SP F +L ++I+ QQ++ KAA ++
Sbjct: 6 GETEI--NHLKRRDKKMAAAIE--RLGMIARPLSPDLFAALIRNIVDQQISVKAALTVNA 61
Query: 125 RFVALFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDD 184
R + L + P + A + ++ G++ RKA Y++ A DG L +I + D
Sbjct: 62 RLMTLVG---TVTPITIAAAPIEAIQGCGMTMRKAGYIKGAANAALDGSLDLSAISLLPD 118
Query: 185 VTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEE 244
+ L+S+ GIG W+ M +I SL +PDVL GDL +R+G+ LY K LP
Sbjct: 119 NEVIDQLSSLNGIGIWTAEMLLISSLSRPDVLSWGDLAIRRGMMNLYRHKTLPRERFERY 178
Query: 245 VCEKWKPYRSVGSWYMWRL 263
PY + S Y+W L
Sbjct: 179 RRRY-TPYGTTASLYLWAL 196
>gi|154247764|ref|YP_001418722.1| HhH-GPD family protein [Xanthobacter autotrophicus Py2]
gi|154161849|gb|ABS69065.1| HhH-GPD family protein [Xanthobacter autotrophicus Py2]
Length = 217
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 94/192 (48%), Gaps = 2/192 (1%)
Query: 70 DIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVAL 129
D AL L DP L L+D PT F LA ++ QQL+ +A++I+ R +
Sbjct: 14 DRALDDLLALDPRLVPLVDLAGRPTLRRRPPGFAGLAAVVVAQQLSVASARAIHGRLEST 73
Query: 130 FNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFK 189
G ++ +A+LA +P+ LR G+S K L +A +G + +++ M+ +
Sbjct: 74 LGGAPSV--EAMLAATPEALRAAGLSAPKIRTLTGIARALAEGAVDLDAVARMEADAAAE 131
Query: 190 MLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKW 249
LT + G+G W+ ++++F L + D P GDL ++ L + L + V E W
Sbjct: 132 TLTRLPGVGLWTADIYLLFCLGRADAFPHGDLALQVALGEAFDLPGRATPQGLRAVAEDW 191
Query: 250 KPYRSVGSWYMW 261
+P R V + +W
Sbjct: 192 RPLRGVAAHLLW 203
>gi|422318640|ref|ZP_16399769.1| DNA-3-methyladenine glycosylase II, partial [Achromobacter
xylosoxidans C54]
gi|317406764|gb|EFV86901.1| DNA-3-methyladenine glycosylase II [Achromobacter xylosoxidans C54]
Length = 199
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 76/126 (60%), Gaps = 3/126 (2%)
Query: 138 PDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGIL--SDESIVEMDDVTMFKMLTSVK 195
P A+L PQ R G S K + +R +A+ DG++ DE++ M D + + L +++
Sbjct: 4 PRALLDTDPQVQRACGFSASKLATIRGIAQAALDGLIPARDEALA-MSDEALVERLVTLR 62
Query: 196 GIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSV 255
G+G W+V M +I++L + D+LPV D GVR+G + L L + P +M + E + PYR++
Sbjct: 63 GVGRWTVEMLLIYTLERMDILPVDDFGVREGYRRLKRLDKAPSPAQMRAIGEAFSPYRTI 122
Query: 256 GSWYMW 261
+WY+W
Sbjct: 123 AAWYLW 128
>gi|392961987|ref|ZP_10327434.1| HhH-GPD family protein [Pelosinus fermentans DSM 17108]
gi|421056158|ref|ZP_15519085.1| HhH-GPD family protein [Pelosinus fermentans B4]
gi|421061392|ref|ZP_15523726.1| HhH-GPD family protein [Pelosinus fermentans B3]
gi|421067287|ref|ZP_15528783.1| HhH-GPD family protein [Pelosinus fermentans A12]
gi|421072863|ref|ZP_15533967.1| HhH-GPD family protein [Pelosinus fermentans A11]
gi|392438574|gb|EIW16397.1| HhH-GPD family protein [Pelosinus fermentans B4]
gi|392445290|gb|EIW22622.1| HhH-GPD family protein [Pelosinus fermentans A11]
gi|392449926|gb|EIW27001.1| HhH-GPD family protein [Pelosinus fermentans B3]
gi|392450016|gb|EIW27074.1| HhH-GPD family protein [Pelosinus fermentans A12]
gi|392452745|gb|EIW29650.1| HhH-GPD family protein [Pelosinus fermentans DSM 17108]
Length = 206
Score = 97.4 bits (241), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 106/191 (55%), Gaps = 4/191 (2%)
Query: 73 LRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNG 132
+ +L++ DP+L + E F +L +I+ QQ++ KAA +++ R F
Sbjct: 16 IEYLQNVDPILGAAMKRLGKIDREVIPDLFAALIYAIVGQQISVKAAYTVWHRMQLHF-- 73
Query: 133 EDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLT 192
+ ++P + + +++++ G+S RKA Y++++ E L+ + ++ D + K L+
Sbjct: 74 -EEMIPQQIALATVEEIQQCGMSTRKAIYIKNIGEAVMHSRLNLIELYDLPDEEVIKRLS 132
Query: 193 SVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPY 252
+ GIG W+ M ++ S+ +PD++ GD+ +R+G+ LY L + + E+ +++ PY
Sbjct: 133 QINGIGVWTAEMLLLNSMERPDIVSWGDIAIRRGMMNLYNLTTITKE-QFEKYKKQYSPY 191
Query: 253 RSVGSWYMWRL 263
SV S Y+W+L
Sbjct: 192 GSVASIYLWKL 202
>gi|400754503|ref|YP_006562871.1| DNA repair protein [Phaeobacter gallaeciensis 2.10]
gi|398653656|gb|AFO87626.1| putative DNA repair protein [Phaeobacter gallaeciensis 2.10]
Length = 222
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 60/186 (32%), Positives = 92/186 (49%), Gaps = 8/186 (4%)
Query: 76 LRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDN 135
L D+D A ID P F L +I+ QQ++ +A +I+ R V G D
Sbjct: 32 LADQDARFAAAIDLCGPLPLRRKPEGFAELLSAIVSQQVSVASANAIWGRMVE--AGLDT 89
Query: 136 ILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVK 195
AV A S LR +G+S +K Y LA D +++ ++ D + +LT V
Sbjct: 90 --ATAVAAASEDDLRGVGLSRQKIRYAHALAAAGIDF----DALRQLPDSEVIAILTQVS 143
Query: 196 GIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSV 255
GIG W+ ++ +FSL + DV GDL +++G ++L L E P M + E W P+RSV
Sbjct: 144 GIGTWTAEIYAMFSLGRADVFAHGDLALQEGARILLDLPERPKPAAMRRIAEAWSPWRSV 203
Query: 256 GSWYMW 261
+ +W
Sbjct: 204 AARVLW 209
>gi|15828566|ref|NP_325926.1| methylated-DNA--protein-cysteine methyltransferase [Mycoplasma
pulmonis UAB CTIP]
gi|14089508|emb|CAC13268.1| METHYLATED-DNA--PROTEIN-CYSTEINE METHYLTRANSFERASE
(6-O-METHYLGUANINE-DNA METHYLTRANSFERASE)
(O-6-METHYLGUANINE-DNA-ALKYLTRANSFERASE) [Mycoplasma
pulmonis]
Length = 378
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 106/200 (53%), Gaps = 4/200 (2%)
Query: 73 LRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNG 132
+ +L+ KD LA I+ E + F+++ SI+ QQ++ KA K+++ RF
Sbjct: 10 VNYLKRKDKKLAKAIEKIGFIKREIKPNLFVAIVHSIIGQQISTKAHKTLWKRFEEKVK- 68
Query: 133 EDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLT 192
NI + + IG++ RK +Y+ D A+K + +++ M D K L+
Sbjct: 69 --NIDAKTLASFDLFDFDGIGIANRKLTYILDFAKKVYNKEFDIDALYSMSDNEAIKSLS 126
Query: 193 SVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPY 252
S+KGIG W+ M MIFS+ + ++L DL + + +++LYG K++ + E++ +++ P+
Sbjct: 127 SLKGIGQWTAEMAMIFSMQRKNILSYKDLAIIRAIKMLYGYKDVD-KITFEKLEKRYSPF 185
Query: 253 RSVGSWYMWRLMEAKGVLPN 272
S+ S Y+W + K N
Sbjct: 186 ASIASLYLWEIASGKWDFSN 205
>gi|423473425|ref|ZP_17450167.1| hypothetical protein IEM_04729 [Bacillus cereus BAG6O-2]
gi|423556595|ref|ZP_17532898.1| hypothetical protein II3_01800 [Bacillus cereus MC67]
gi|401194869|gb|EJR01837.1| hypothetical protein II3_01800 [Bacillus cereus MC67]
gi|402425910|gb|EJV58052.1| hypothetical protein IEM_04729 [Bacillus cereus BAG6O-2]
Length = 287
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 99/190 (52%), Gaps = 9/190 (4%)
Query: 81 PLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNIL--- 137
PL T A+ P E F L + I++QQ+ K A + +FV + E N +
Sbjct: 102 PLFETY--AYTPIILEFDY--FACLLRCIIHQQINLKFATVLTDQFVKRYGTEKNGVFFF 157
Query: 138 --PDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVK 195
P+ V +S ++LRE S RKA Y+ LA+ DG L I + + L ++
Sbjct: 158 PTPERVANISIEELREQKFSQRKAEYIVGLAKHIADGKLDLARIENETEEEVSAQLLPIR 217
Query: 196 GIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSV 255
GIGAW+V F++F L + ++ P D+G+R+ LQ ++ L P +E+V ++ +PY S
Sbjct: 218 GIGAWTVQNFLMFGLGRKNMFPEADIGIRRALQGVFQLDNKPDDAFLEKVKQECEPYCSY 277
Query: 256 GSWYMWRLME 265
+ Y+W+ +E
Sbjct: 278 AALYLWKSIE 287
>gi|443896254|dbj|GAC73598.1| 3-methyladenine DNA glycosidase [Pseudozyma antarctica T-34]
Length = 441
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 52/145 (35%), Positives = 81/145 (55%), Gaps = 21/145 (14%)
Query: 102 FLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNILPDA------------------VLA 143
F ++ SIL QQ+++ AA+S+ +F LF+ N +P+ VL
Sbjct: 160 FKTVTTSILGQQISWLAARSVLYKFCRLFHP--NEMPEKPDFVGFPRERWPFPTPLMVLR 217
Query: 144 VSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDV-TMFKMLTSVKGIGAWSV 202
S LR G+S+ K Y++DLA ++ DG L I+E+DD L+ VKG+G W+
Sbjct: 218 TSDADLRAAGLSFAKIKYVKDLAARFVDGRLDTRQILELDDEEACVTELSKVKGVGRWTS 277
Query: 203 HMFMIFSLHKPDVLPVGDLGVRKGL 227
M ++F++ KPD+LP DLGV+KG+
Sbjct: 278 EMILMFAMRKPDILPCADLGVQKGM 302
>gi|410940091|ref|ZP_11371909.1| base excision DNA repair protein, HhH-GPD family [Leptospira
noguchii str. 2006001870]
gi|410784721|gb|EKR73694.1| base excision DNA repair protein, HhH-GPD family [Leptospira
noguchii str. 2006001870]
Length = 213
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 65/200 (32%), Positives = 102/200 (51%), Gaps = 9/200 (4%)
Query: 66 KGEVDIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTR 125
K E L KD L ++ H P F S + F +L IL QQ++ +AK+
Sbjct: 10 KKEFHSICDQLFQKDRGLHSIFIKHGYPPFWSRKPNFETLVHIILEQQVSLASAKA---A 66
Query: 126 FVALFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDV 185
V L N ++ +L +S +LRE S +K SY+RDLA+ L ++ D
Sbjct: 67 LVKLKNKIGSVTAPKILLLSDIELRECYFSRQKTSYVRDLAKFVLSKRLILRNLASQSDQ 126
Query: 186 TMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELP---GALKM 242
+ LT+VKGIG W+ +F+I +LH+ D+ P+GDL +Q L +K+LP K+
Sbjct: 127 KIRDDLTAVKGIGNWTADIFLIMALHRVDIFPLGDLA---AVQSLKKIKKLPVDTSHDKI 183
Query: 243 EEVCEKWKPYRSVGSWYMWR 262
+ + WKP+RS+ + +W
Sbjct: 184 LSISKSWKPFRSIATMLLWH 203
>gi|229101228|ref|ZP_04231992.1| DNA-3-methyladenine glycosylase II [Bacillus cereus Rock3-28]
gi|228682196|gb|EEL36309.1| DNA-3-methyladenine glycosylase II [Bacillus cereus Rock3-28]
Length = 291
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 93/169 (55%), Gaps = 5/169 (2%)
Query: 102 FLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNIL-----PDAVLAVSPQQLREIGVSY 156
F L + I++QQ+ K A + +FV + E N + P+ V +S ++LRE S
Sbjct: 123 FACLLRCIIHQQINLKFATVLTEQFVKRYGTEKNGVFFFPTPEIVANISIEELREQKFSQ 182
Query: 157 RKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVL 216
RKA Y+ LAE+ G L SI + + L ++GIGAW+V F++F L + ++
Sbjct: 183 RKAEYIVGLAERIAHGTLDLASIETKTEEEVSAQLLPIRGIGAWTVQNFLMFGLGRKNMF 242
Query: 217 PVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSWYMWRLME 265
P D+G+++ +Q ++ L + P +E V ++ +PY S + Y+W+ +E
Sbjct: 243 PKADIGIQRAVQGVFQLDDKPDDAFLENVKQECEPYCSYAALYLWKSIE 291
>gi|333372350|ref|ZP_08464279.1| DNA-3-methyladenine glycosylase [Desmospora sp. 8437]
gi|332974274|gb|EGK11206.1| DNA-3-methyladenine glycosylase [Desmospora sp. 8437]
Length = 294
Score = 97.1 bits (240), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 102/207 (49%), Gaps = 10/207 (4%)
Query: 65 FKGEVDIA-LRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIY 123
F +VD+A K+P LA ++++ R F + + L K+I+ QQL A ++
Sbjct: 82 FSLDVDLAPFYEQMKKEPRLAPIVESRRGLHFVLDPTLYECLIKTIISQQLNLAFAATLI 141
Query: 124 TRFVALFNG-----EDNI----LPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGIL 174
R + E+ + P V + + L+ + + RKA Y+ D++ K DG L
Sbjct: 142 QRLIERAGSKVPFREEALPVFPTPSQVARLEYEDLQRLQFNRRKAEYVIDISRKIVDGGL 201
Query: 175 SDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLK 234
E + + D + L S++G+G W+ ++F + +PD+LP D+G+R L+ YGL
Sbjct: 202 DLEGMKTLPDQLVTDQLVSLRGVGRWTAECLLLFGMGRPDLLPAADIGLRNALKKAYGLD 261
Query: 235 ELPGALKMEEVCEKWKPYRSVGSWYMW 261
P + E W P+RS ++Y+W
Sbjct: 262 RQPTESDVRRWGENWTPWRSYATFYLW 288
>gi|426197501|gb|EKV47428.1| hypothetical protein AGABI2DRAFT_150872 [Agaricus bisporus var.
bisporus H97]
Length = 345
Score = 97.1 bits (240), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 53/127 (41%), Positives = 81/127 (63%), Gaps = 12/127 (9%)
Query: 112 QQLAYKAAKSIYTRFVALFN-------GEDNI----LPDAVLAVSPQQLREIGVSYRKAS 160
QQ+++ AA+SI +F L++ G+D I P V A LR G+S RKA
Sbjct: 67 QQISWLAARSIIHKFKRLYDPTLPEKPGDDPINSFPTPSQVAATDISVLRSAGLSTRKAE 126
Query: 161 YLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGD 220
Y++DLA+++ DG LS + I+ +D + ML V+GIG+ ++MF +FSL +PD+LP+GD
Sbjct: 127 YIQDLAKRFADGRLSTKKILSANDDDLADMLIQVRGIGS-VLNMFAMFSLRRPDILPIGD 185
Query: 221 LGVRKGL 227
LGV++GL
Sbjct: 186 LGVQRGL 192
Score = 43.9 bits (102), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 32/55 (58%), Gaps = 9/55 (16%)
Query: 213 PDVLPVGDLGVRKGLQVLYGLKELPGAL----KMEEVCEKWKPYRSVGSWYMWRL 263
P L + +L R + G K++ GAL +ME + E WKPYRS+G +YMW L
Sbjct: 292 PKTLSISELRSR-----ISGKKKVKGALLTPDEMEALTESWKPYRSIGVYYMWSL 341
>gi|423619962|ref|ZP_17595793.1| hypothetical protein IIO_05285 [Bacillus cereus VD115]
gi|401250455|gb|EJR56755.1| hypothetical protein IIO_05285 [Bacillus cereus VD115]
Length = 287
Score = 97.1 bits (240), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 93/169 (55%), Gaps = 5/169 (2%)
Query: 102 FLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNIL-----PDAVLAVSPQQLREIGVSY 156
F L + I++QQ+ K A + +FV + E N + P+ V +S ++LRE S
Sbjct: 119 FACLLRCIIHQQINLKFATVLTEQFVKRYGTEKNGVFFFPTPEIVANISIEELREQKFSQ 178
Query: 157 RKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVL 216
RKA Y+ LAE+ G L SI + + L ++GIGAW+V F++F L + ++
Sbjct: 179 RKAEYIVGLAERIARGTLDLASIETKTEEEVSAQLLPIRGIGAWTVQNFLMFGLGRKNMF 238
Query: 217 PVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSWYMWRLME 265
P D+G+++ +Q ++ L + P +E V ++ +PY S + Y+W+ +E
Sbjct: 239 PKADIGIQRAVQGVFQLDDKPDDAFLENVKQECEPYCSYAALYLWKSIE 287
>gi|398339657|ref|ZP_10524360.1| 3-methyladenine DNA glycosylase [Leptospira kirschneri serovar Bim
str. 1051]
gi|418677545|ref|ZP_13238819.1| base excision DNA repair protein, HhH-GPD family [Leptospira
kirschneri serovar Grippotyphosa str. RM52]
gi|418687385|ref|ZP_13248544.1| base excision DNA repair protein, HhH-GPD family [Leptospira
kirschneri serovar Grippotyphosa str. Moskva]
gi|418742313|ref|ZP_13298686.1| base excision DNA repair protein, HhH-GPD family [Leptospira
kirschneri serovar Valbuzzi str. 200702274]
gi|400320735|gb|EJO68595.1| base excision DNA repair protein, HhH-GPD family [Leptospira
kirschneri serovar Grippotyphosa str. RM52]
gi|410737709|gb|EKQ82448.1| base excision DNA repair protein, HhH-GPD family [Leptospira
kirschneri serovar Grippotyphosa str. Moskva]
gi|410750671|gb|EKR07651.1| base excision DNA repair protein, HhH-GPD family [Leptospira
kirschneri serovar Valbuzzi str. 200702274]
Length = 213
Score = 97.1 bits (240), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 62/189 (32%), Positives = 101/189 (53%), Gaps = 9/189 (4%)
Query: 76 LRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDN 135
L KD L +++ + P F S + F +L IL QQ++ +AK+ V L N +
Sbjct: 20 LCQKDRDLHSILLKYGYPPFWSRKPNFETLVHIILEQQVSLASAKA---ALVKLKNKIGS 76
Query: 136 ILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVK 195
+ +L +S +LRE S +K Y+RDLAE L +++ D + K L +VK
Sbjct: 77 VTAPKILLLSDIELRECYFSRQKTGYVRDLAEFVFSKRLILGNLISKSDQKIRKDLIAVK 136
Query: 196 GIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVC---EKWKPY 252
GIG W+V +F+I +LH+ D+ P+GDL +Q L +K LP +++ + WKP+
Sbjct: 137 GIGNWTVDIFLIMALHRADIFPLGDLA---AVQSLKKIKNLPANTSRDQILFLSKSWKPF 193
Query: 253 RSVGSWYMW 261
RS+ + +W
Sbjct: 194 RSIATMLLW 202
>gi|194018032|ref|ZP_03056638.1| DNA-3-methyladenine glycosylase II [Bacillus pumilus ATCC 7061]
gi|194010277|gb|EDW19853.1| DNA-3-methyladenine glycosylase II [Bacillus pumilus ATCC 7061]
Length = 289
Score = 97.1 bits (240), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 101/190 (53%), Gaps = 7/190 (3%)
Query: 83 LATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGED------NI 136
LA + + H+ + L K I++QQL A + RFV + GE +
Sbjct: 99 LAPVFERHKGTPLMLDFHLYHCLMKCIIHQQLNLAFAFELTKRFVHTY-GEQIEGVWFDP 157
Query: 137 LPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKG 196
LP+A+ ++ + LR++ S RKA Y+ D++++ G LS E + ++ D+ + + L ++G
Sbjct: 158 LPEAIASLETEDLRKLQFSQRKAEYVIDVSKRIVSGSLSLEELHDLTDLEVEERLLPIRG 217
Query: 197 IGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVG 256
IG W+V ++ L +P++ P+ D+G++ ++ + L P +M + + W PY S
Sbjct: 218 IGPWTVQNVLMNGLGRPNLFPMADIGIQNAIKRHFDLPAKPTKEEMVALSKDWTPYLSYA 277
Query: 257 SWYMWRLMEA 266
S Y+WR +E
Sbjct: 278 SLYLWRSIET 287
>gi|423381545|ref|ZP_17358828.1| hypothetical protein IC9_04897 [Bacillus cereus BAG1O-2]
gi|423444607|ref|ZP_17421512.1| hypothetical protein IEA_04936 [Bacillus cereus BAG4X2-1]
gi|423450434|ref|ZP_17427312.1| hypothetical protein IEC_05041 [Bacillus cereus BAG5O-1]
gi|423467660|ref|ZP_17444428.1| hypothetical protein IEK_04847 [Bacillus cereus BAG6O-1]
gi|423537062|ref|ZP_17513480.1| hypothetical protein IGI_04894 [Bacillus cereus HuB2-9]
gi|423542787|ref|ZP_17519176.1| hypothetical protein IGK_04877 [Bacillus cereus HuB4-10]
gi|423543903|ref|ZP_17520261.1| hypothetical protein IGO_00338 [Bacillus cereus HuB5-5]
gi|423626370|ref|ZP_17602147.1| hypothetical protein IK3_04967 [Bacillus cereus VD148]
gi|401124819|gb|EJQ32580.1| hypothetical protein IEC_05041 [Bacillus cereus BAG5O-1]
gi|401167845|gb|EJQ75119.1| hypothetical protein IGK_04877 [Bacillus cereus HuB4-10]
gi|401185607|gb|EJQ92699.1| hypothetical protein IGO_00338 [Bacillus cereus HuB5-5]
gi|401252549|gb|EJR58807.1| hypothetical protein IK3_04967 [Bacillus cereus VD148]
gi|401629454|gb|EJS47271.1| hypothetical protein IC9_04897 [Bacillus cereus BAG1O-2]
gi|402410529|gb|EJV42930.1| hypothetical protein IEA_04936 [Bacillus cereus BAG4X2-1]
gi|402413275|gb|EJV45621.1| hypothetical protein IEK_04847 [Bacillus cereus BAG6O-1]
gi|402460246|gb|EJV91969.1| hypothetical protein IGI_04894 [Bacillus cereus HuB2-9]
Length = 287
Score = 97.1 bits (240), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 93/169 (55%), Gaps = 5/169 (2%)
Query: 102 FLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNIL-----PDAVLAVSPQQLREIGVSY 156
F L + I++QQ+ K A + +FV + E N + P+ V +S ++LRE S
Sbjct: 119 FACLLRCIIHQQINLKFATVLTEQFVKRYGTEKNGVFFFPTPEIVANISIEELREQKFSQ 178
Query: 157 RKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVL 216
RKA Y+ LAE+ G L SI + + L ++GIGAW+V F++F L + ++
Sbjct: 179 RKAEYIVGLAERIARGTLDLASIETGTEEEVSAQLLPIRGIGAWTVQNFLMFGLGRKNMF 238
Query: 217 PVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSWYMWRLME 265
P D+G+++ +Q ++ L + P +E V ++ +PY S + Y+W+ +E
Sbjct: 239 PKADIGIQRAVQGVFQLDDKPDDAFLENVKQECEPYCSYAALYLWKSIE 287
>gi|374372927|ref|ZP_09630588.1| HhH-GPD family protein [Niabella soli DSM 19437]
gi|373235003|gb|EHP54795.1| HhH-GPD family protein [Niabella soli DSM 19437]
Length = 210
Score = 97.1 bits (240), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 96/188 (51%), Gaps = 3/188 (1%)
Query: 74 RHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGE 133
+ L KD LA +++A+ PP + + F SL IL QQ++ +A + + G
Sbjct: 15 KQLAKKDKHLAAVLNAYGPPPMWTRPNSFESLVHIILEQQVSLASALAALKKLQEFTGG- 73
Query: 134 DNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTS 193
I P +L + Q LR VS +K Y+R LA+ D L ++++ + D + LT+
Sbjct: 74 --ITPGKILRMDDQALRACYVSRQKMIYIRGLAKAIADKELDLDAMLLLTDNAVRAKLTT 131
Query: 194 VKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYR 253
KGIG W+V ++++F L + D+ P GDL L+ L L + + E+W PYR
Sbjct: 132 FKGIGNWTVDVYLMFVLQRTDIFPSGDLAAVNALKQLKTLAAATPREALIAIAEEWMPYR 191
Query: 254 SVGSWYMW 261
++ + +W
Sbjct: 192 TIATMILW 199
>gi|229083729|ref|ZP_04216050.1| DNA-3-methyladenine glycosylase II [Bacillus cereus Rock3-44]
gi|228699587|gb|EEL52251.1| DNA-3-methyladenine glycosylase II [Bacillus cereus Rock3-44]
Length = 291
Score = 97.1 bits (240), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 105/198 (53%), Gaps = 11/198 (5%)
Query: 75 HLRDKD--PLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNG 132
H R+ PL T A+ P E F L + I++QQ+ K A ++ +FV +
Sbjct: 98 HFRNTSLRPLFETY--AYTPLVLEFDY--FACLLRCIIHQQVHLKFATALTEQFVKKYGT 153
Query: 133 EDNIL-----PDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTM 187
E N + P+ V +S ++LR S RKA Y+ LA+ +G L+ + + + +
Sbjct: 154 EKNGVFFFPTPERVANISVEELRNQKFSQRKAEYMIGLAKHIVEGKLNLVELEKQTEEEV 213
Query: 188 FKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCE 247
L V+GIGAW+V F++F L + ++ P D+G+++ LQ L+ L+ P +E+V +
Sbjct: 214 SAQLLPVRGIGAWTVQNFLLFGLGRKNMFPKADIGIQRALQGLFQLENKPDDALLEQVKQ 273
Query: 248 KWKPYRSVGSWYMWRLME 265
+ +PY S + Y+W+ +E
Sbjct: 274 ECEPYCSYAALYLWKSIE 291
>gi|229074351|ref|ZP_04207389.1| DNA-3-methyladenine glycosylase II [Bacillus cereus Rock4-18]
gi|229095126|ref|ZP_04226121.1| DNA-3-methyladenine glycosylase II [Bacillus cereus Rock3-29]
gi|229114080|ref|ZP_04243505.1| DNA-3-methyladenine glycosylase II [Bacillus cereus Rock1-3]
gi|228669350|gb|EEL24767.1| DNA-3-methyladenine glycosylase II [Bacillus cereus Rock1-3]
gi|228688311|gb|EEL42194.1| DNA-3-methyladenine glycosylase II [Bacillus cereus Rock3-29]
gi|228708793|gb|EEL60928.1| DNA-3-methyladenine glycosylase II [Bacillus cereus Rock4-18]
Length = 291
Score = 97.1 bits (240), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 93/169 (55%), Gaps = 5/169 (2%)
Query: 102 FLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNIL-----PDAVLAVSPQQLREIGVSY 156
F L + I++QQ+ K A + +FV + E N + P+ V +S ++LRE S
Sbjct: 123 FACLLRCIIHQQINLKFATVLTEQFVKRYGTEKNGVFFFPTPEIVANISIEELREQKFSQ 182
Query: 157 RKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVL 216
RKA Y+ LAE+ G L SI + + L ++GIGAW+V F++F L + ++
Sbjct: 183 RKAEYIVGLAERIARGTLDLASIETGTEEEVSAQLLPIRGIGAWTVQNFLMFGLGRKNMF 242
Query: 217 PVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSWYMWRLME 265
P D+G+++ +Q ++ L + P +E V ++ +PY S + Y+W+ +E
Sbjct: 243 PKADIGIQRAVQGVFQLDDKPDDAFLENVKQECEPYCSYAALYLWKSIE 291
>gi|254472488|ref|ZP_05085888.1| DNA-3-methyladenine glycosidase II protein [Pseudovibrio sp. JE062]
gi|374328540|ref|YP_005078724.1| dna-3-methyladenine glycosidase ii protein [Pseudovibrio sp.
FO-BEG1]
gi|211958771|gb|EEA93971.1| DNA-3-methyladenine glycosidase II protein [Pseudovibrio sp. JE062]
gi|359341328|gb|AEV34702.1| dna-3-methyladenine glycosidase ii protein [Pseudovibrio sp.
FO-BEG1]
Length = 213
Score = 97.1 bits (240), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 106/216 (49%), Gaps = 8/216 (3%)
Query: 60 FKPLTFKGEVDIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAA 119
KP+ +++ L L D L ++D + F L ++ Q L+ AA
Sbjct: 1 MKPIDTLEDIERELASLVQLDERLVRVVDIAGEVPLRRRSADFAGLCNIVVAQLLSVAAA 60
Query: 120 KSIYTRFVALFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESI 179
SI+ R AL + PD +L+ S ++L +G+S K L+ +AE+ G+ E++
Sbjct: 61 ASIWARLEALVVPFE---PDVLLSKSDEELLGVGLSNAKLRTLKAIAEELKAGLCLSEAV 117
Query: 180 VEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGA 239
+V K L +KGIG WS +F++F PDV PVGD+ ++ +Q + L+E P
Sbjct: 118 DWPGEVA-HKRLCEIKGIGPWSADIFLLFCAGHPDVFPVGDVALQAAVQHAFDLEERPKG 176
Query: 240 LKMEEVCEKWKPYRSVGS---WYMWRLM-EAKGVLP 271
+ E+ E W P+R + W +R+M E + LP
Sbjct: 177 KVLAEIAEAWSPHRGTAARLFWSYYRVMKEGRETLP 212
>gi|393772212|ref|ZP_10360669.1| HhH-GPD [Novosphingobium sp. Rr 2-17]
gi|392722351|gb|EIZ79759.1| HhH-GPD [Novosphingobium sp. Rr 2-17]
Length = 205
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 99/194 (51%), Gaps = 3/194 (1%)
Query: 68 EVDIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFV 127
E+ L + +P +A I+ P + + +L ++I+ QQ++ AA S++ R
Sbjct: 7 ELKSGLDAIAQAEPAMAQAIERCGYPEPRIRPTGYATLLRTIVGQQVSVAAAASVWARLE 66
Query: 128 ALFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTM 187
AL D++ P+ +LA + LR G+S +K Y R L E G L D + +DD
Sbjct: 67 ALLG--DDLAPETLLAAEFEALRGCGLSRQKQGYARSLCELVIAGSL-DFDALPLDDEEA 123
Query: 188 FKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCE 247
+L +KGIG WS ++++F+ +PD+ P GDL V+ GL + L P + + E
Sbjct: 124 IDLLVKIKGIGRWSAEIYLLFAEGRPDIWPAGDLAVQAGLHKILSLDARPSERETRALAE 183
Query: 248 KWKPYRSVGSWYMW 261
W+P+R + + W
Sbjct: 184 AWRPHRGAAAIFTW 197
>gi|407708386|ref|YP_006831971.1| protein fdhD [Bacillus thuringiensis MC28]
gi|407386071|gb|AFU16572.1| DNA-3-methyladenine glycosylase II [Bacillus thuringiensis MC28]
Length = 291
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 93/169 (55%), Gaps = 5/169 (2%)
Query: 102 FLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNIL-----PDAVLAVSPQQLREIGVSY 156
F L + I++QQ+ K A + +FV + E N + P+ V +S ++LRE S
Sbjct: 123 FACLLRCIIHQQINLKFATVLTKQFVKRYGTEKNGVFFFPTPEIVANISIEELREQKFSQ 182
Query: 157 RKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVL 216
RKA Y+ LAE+ G L SI + + L ++GIGAW+V F++F L + ++
Sbjct: 183 RKAEYIVGLAERIARGTLDLASIETGTEEEVSAQLLPIRGIGAWTVQNFLMFGLGRKNMF 242
Query: 217 PVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSWYMWRLME 265
P D+G+++ +Q ++ L + P +E V ++ +PY S + Y+W+ +E
Sbjct: 243 PKADIGIQRAVQGVFQLDDKPDDAFLENVKQECEPYCSYAALYLWKSIE 291
>gi|421078129|ref|ZP_15539088.1| HhH-GPD family protein [Pelosinus fermentans JBW45]
gi|392523714|gb|EIW46881.1| HhH-GPD family protein [Pelosinus fermentans JBW45]
Length = 206
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 106/191 (55%), Gaps = 4/191 (2%)
Query: 73 LRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNG 132
+ +L++ D +L + E F +L +I+ QQ++ KAA +++ R F
Sbjct: 16 IEYLQNVDQILGAAMKRLGKIDREVIPDLFTALIYAIVGQQISVKAAYTVWHRMQLHF-- 73
Query: 133 EDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLT 192
+ ++P + + +++++ G+S RKA Y++++ E G L + ++ D + K L+
Sbjct: 74 -EEMIPQHIALATVEEIQQCGMSTRKAIYIKNIGEAVMYGSLKLMELYDLSDEEVIKRLS 132
Query: 193 SVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPY 252
+ GIG W+ M ++ S+ +PD++ GD+ +R+G+ LY L ++ + E+ +++ PY
Sbjct: 133 KMNGIGVWTAEMLLLNSMERPDIVSWGDIAIRRGMMNLYNLTDITKE-QFEKYKKQYSPY 191
Query: 253 RSVGSWYMWRL 263
SV S Y+W+L
Sbjct: 192 GSVASIYLWKL 202
>gi|254282691|ref|ZP_04957659.1| HhH-GPD family protein [gamma proteobacterium NOR51-B]
gi|219678894|gb|EED35243.1| HhH-GPD family protein [gamma proteobacterium NOR51-B]
Length = 209
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/171 (34%), Positives = 92/171 (53%), Gaps = 2/171 (1%)
Query: 93 PTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNILPDAVLAVSPQQLREI 152
P + F +LA+ I+ QQ++ AA SI R A GE I D V V ++LR
Sbjct: 35 PAERRREAGFAALARIIIGQQVSVAAASSIAARVEAALGGE--ISADQVSRVGDEKLRSA 92
Query: 153 GVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHK 212
G+S +K +YLR+LA + + E +V +D + + +T++KG G WS M+++FSL +
Sbjct: 93 GLSRQKVNYLRELARHCREEGFAPERLVREEDDAVLEAITAIKGFGVWSAQMYLMFSLGR 152
Query: 213 PDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSWYMWRL 263
D+ PVGDL VR G + L E P + + E + P+RS + W+
Sbjct: 153 TDIWPVGDLAVRAGFGRIMALDERPDEHETARLGEVFSPHRSALAMLCWKF 203
>gi|421091242|ref|ZP_15552019.1| base excision DNA repair protein, HhH-GPD family [Leptospira
kirschneri str. 200802841]
gi|410000035|gb|EKO50714.1| base excision DNA repair protein, HhH-GPD family [Leptospira
kirschneri str. 200802841]
Length = 213
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/189 (32%), Positives = 101/189 (53%), Gaps = 9/189 (4%)
Query: 76 LRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDN 135
L KD L +++ + P F S + F +L IL QQ++ +AK+ V L N +
Sbjct: 20 LCQKDRDLHSILLKYGYPPFWSRKPNFETLVHIILEQQVSLASAKA---ALVKLKNKIGS 76
Query: 136 ILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVK 195
+ +L +S +LRE S +K Y+RDLAE L +++ D + K L +VK
Sbjct: 77 VTAPKILLLSDIELRECYFSRQKTGYVRDLAEFVFSKRLILGNLISKSDQKIRKDLIAVK 136
Query: 196 GIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVC---EKWKPY 252
GIG W+V +F+I +LH+ D+ P+GDL +Q L +K LP +++ + WKP+
Sbjct: 137 GIGNWTVDIFLIMALHRADIFPLGDLA---AVQSLKKIKNLPADTSRDQILFLSKSWKPF 193
Query: 253 RSVGSWYMW 261
RS+ + +W
Sbjct: 194 RSIATMLLW 202
>gi|158421995|ref|YP_001523287.1| HhH-GPD protein [Azorhizobium caulinodans ORS 571]
gi|158328884|dbj|BAF86369.1| HhH-GPD protein [Azorhizobium caulinodans ORS 571]
Length = 217
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 101/205 (49%), Gaps = 8/205 (3%)
Query: 64 TFKGEVDIALRHLRDKDPLLATLIDAHRPPTFESSRSP-FLSLAKSILYQQLAYKAAKSI 122
TF+ +D R L D L A + +A RPP R+P F L I+ QQL+ AA++I
Sbjct: 12 TFEAALD---RLLSLDDRLHALVAEAGRPPL--RRRAPDFAGLVNIIIAQQLSVAAARAI 66
Query: 123 YTRFVALFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEM 182
R + G + +A+L SP+ L+ G+S K L +A DG++ + M
Sbjct: 67 SARTEQVLGGPPTV--EALLNASPETLKAGGLSAPKIRTLTRIARALADGVVDLAHVEAM 124
Query: 183 DDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKM 242
+ LT + GIG W+ ++++F L + D P GDL ++ +GL AL +
Sbjct: 125 EADAAADYLTRLPGIGRWTADIYLLFCLGRSDAFPEGDLALQVAAADAFGLPGRASALGL 184
Query: 243 EEVCEKWKPYRSVGSWYMWRLMEAK 267
+ + E W+PYR V + +W A+
Sbjct: 185 KAIAEDWRPYRGVAAHLLWAYYGAR 209
>gi|84497070|ref|ZP_00995892.1| base-excision DNA repair protein [Janibacter sp. HTCC2649]
gi|84381958|gb|EAP97840.1| base-excision DNA repair protein [Janibacter sp. HTCC2649]
Length = 213
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/181 (34%), Positives = 93/181 (51%), Gaps = 3/181 (1%)
Query: 81 PLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNILPDA 140
P LA +D H P S F SL IL QQ++ +A + Y R A + P A
Sbjct: 18 PHLAAELDDHGVPERWSRPPGFPSLVLLILEQQVSLASAAAAYARVRARTGA---MTPAA 74
Query: 141 VLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIGAW 200
+LA + +QLRE GVS +K YLR L+ G L + + D K LT + GIG W
Sbjct: 75 LLATTSEQLREDGVSRQKDRYLRALSAAVGSGDLDLAGLATLPDEVAIKRLTQLSGIGPW 134
Query: 201 SVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSWYM 260
+ +++ L +PDV PVGD ++ + GL +P ++E + E+W+P+RS + +
Sbjct: 135 TAQAYLLACLDRPDVWPVGDRALQVAVAERLGLAHVPNGRELEVLGEQWRPHRSTAARLL 194
Query: 261 W 261
W
Sbjct: 195 W 195
>gi|393719448|ref|ZP_10339375.1| HhH-GPD family protein [Sphingomonas echinoides ATCC 14820]
Length = 207
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 99/194 (51%), Gaps = 3/194 (1%)
Query: 68 EVDIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFV 127
++ AL L +++P A + P + +L ++I+ QQ++ KAA+S++ +
Sbjct: 7 QLKTALDALAEREPAFAAALARVGYPEPRLRERGYATLLRTIIGQQVSTKAAQSVWNKLE 66
Query: 128 ALFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTM 187
L D+ P + + + + LRE G+S +KA Y R LA G L D + DD
Sbjct: 67 GLVGSLDD--PANITSATDETLREAGLSRQKAGYARSLAALVASGEL-DLHHLPADDEEA 123
Query: 188 FKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCE 247
L +V GIG WS ++++F+ + D+ P GDL V+ + + G + PG + ++ E
Sbjct: 124 IAKLVAVNGIGRWSAEIYLLFAEGRTDIWPAGDLAVQIEIGRILGHEARPGEKLVRDLAE 183
Query: 248 KWKPYRSVGSWYMW 261
W+P+R + + W
Sbjct: 184 AWRPHRGAAAIFAW 197
>gi|148555342|ref|YP_001262924.1| HhH-GPD family protein [Sphingomonas wittichii RW1]
gi|148500532|gb|ABQ68786.1| HhH-GPD family protein [Sphingomonas wittichii RW1]
Length = 368
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 96/189 (50%), Gaps = 5/189 (2%)
Query: 80 DPLLATLIDA-HRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNILP 138
+P +A +++A PP R + +L ++I+ QQ++ AA +I+ + + + P
Sbjct: 173 EPAIARMLEAIGYPPPRIRDRG-YQTLLRTIVGQQVSVAAANAIWAKMETMVGA--GLAP 229
Query: 139 DAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIG 198
+AV A LR G+S +K +Y R LAE G + D + DD +T++KGIG
Sbjct: 230 EAVAAAPDDLLRATGLSRQKIAYARSLAEHVASGTI-DFDRLPADDEEAIAQMTAIKGIG 288
Query: 199 AWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSW 258
WS ++++F+ + DV P GDL V+ + L GL E P + + W P+R +
Sbjct: 289 RWSAEIYLLFAEGRGDVWPAGDLAVQIEVGRLLGLPERPSERETRRLAHGWSPHRGAAAI 348
Query: 259 YMWRLMEAK 267
+ W A+
Sbjct: 349 FAWHSYNAR 357
>gi|399992826|ref|YP_006573066.1| DNA repair protein [Phaeobacter gallaeciensis DSM 17395 = CIP
105210]
gi|398657381|gb|AFO91347.1| putative DNA repair protein [Phaeobacter gallaeciensis DSM 17395 =
CIP 105210]
Length = 222
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/186 (32%), Positives = 91/186 (48%), Gaps = 8/186 (4%)
Query: 76 LRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDN 135
L D D A ID P F L +I+ QQ++ +A +I+ R V G D
Sbjct: 32 LADHDARFAAAIDLCGPLPLRRKPEGFAELLSAIVSQQVSVASANAIWGRMVE--AGLDT 89
Query: 136 ILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVK 195
AV A S LR +G+S +K Y LA D +++ ++ D + + LT V
Sbjct: 90 --ATAVAAASEDDLRGVGLSRQKIRYAHALAAAGIDF----DALRQLPDSEVIETLTQVS 143
Query: 196 GIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSV 255
GIG W+ ++ +FSL + DV GDL +++G ++L L E P M + E W P+RSV
Sbjct: 144 GIGTWTAEIYAMFSLGRADVFAHGDLALQEGARILLDLPERPKPAAMRRIAEAWSPWRSV 203
Query: 256 GSWYMW 261
+ +W
Sbjct: 204 AARALW 209
>gi|229003419|ref|ZP_04161239.1| DNA-3-methyladenine glycosylase II [Bacillus mycoides Rock1-4]
gi|228757797|gb|EEM07022.1| DNA-3-methyladenine glycosylase II [Bacillus mycoides Rock1-4]
Length = 267
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 105/198 (53%), Gaps = 11/198 (5%)
Query: 75 HLRDKD--PLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNG 132
H R+ PL T A+ P E F L + I++QQ+ K A S+ +FV +
Sbjct: 74 HFRNTSLRPLFETY--AYTPLVLEFDY--FACLLRCIIHQQVHLKFATSLTEQFVKRYGT 129
Query: 133 EDNIL-----PDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTM 187
E N + P+ V +S ++LR S RKA Y+ LA+ +G L+ + + + +
Sbjct: 130 EKNGVFFFPTPERVANISIEELRNQKFSQRKAEYMVGLAKHIVEGKLNLVELEKQTEEVV 189
Query: 188 FKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCE 247
L V+GIGAW+V F++F L + ++ P D+G+++ LQ ++ L+ P +E++ +
Sbjct: 190 AAQLLPVRGIGAWTVQNFLLFGLGRKNMFPKADIGIQRALQGIFQLENKPDDAFLEKMKQ 249
Query: 248 KWKPYRSVGSWYMWRLME 265
+ +PY S + Y+W+ +E
Sbjct: 250 ECEPYCSYAALYLWKSIE 267
>gi|228989611|ref|ZP_04149595.1| DNA-3-methyladenine glycosylase II [Bacillus pseudomycoides DSM
12442]
gi|228770148|gb|EEM18728.1| DNA-3-methyladenine glycosylase II [Bacillus pseudomycoides DSM
12442]
Length = 291
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 106/198 (53%), Gaps = 11/198 (5%)
Query: 75 HLRDKD--PLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNG 132
H R+ PL T A+ P E F L + I++QQ+ K A S+ +FV +
Sbjct: 98 HFRNTSLRPLFETY--AYTPLVLEFDY--FACLLRCIIHQQVHLKFATSLTEQFVKRYGT 153
Query: 133 EDNIL-----PDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTM 187
E N + P+ V +S ++LR S RKA Y+ LA+ +G L+ + + + +
Sbjct: 154 EKNGVFFFPTPERVANISIEELRNQKFSQRKAEYMVGLAKHIVEGKLNLVELEKQTEEVV 213
Query: 188 FKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCE 247
L V+GIGAW+V F++F L + ++ P D+G+++ LQ ++ L++ P +E++ +
Sbjct: 214 AAQLLPVRGIGAWTVQNFLLFGLGRKNMFPKADIGIQRALQGIFQLEDKPDDAFLEKMKQ 273
Query: 248 KWKPYRSVGSWYMWRLME 265
+ +PY S + Y+W+ +E
Sbjct: 274 ECEPYCSYAALYLWKSIE 291
>gi|357386014|ref|YP_004900738.1| HhH-GPD base excision DNA repair family protein [Pelagibacterium
halotolerans B2]
gi|351594651|gb|AEQ52988.1| HhH-GPD base excision DNA repair family protein, probable
3-methyladenine DNA glycosylase/8-oxoguanine DNA
glycosylase [Pelagibacterium halotolerans B2]
Length = 219
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 96/196 (48%), Gaps = 4/196 (2%)
Query: 71 IALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALF 130
+ L L +D LA I T +S S F +A+ + QQL+ +A++I+ R AL
Sbjct: 18 VHLEGLSQRDQRLAAAIARAGEVTLRTSPSGFEGMARIVCGQQLSVASARAIWGRVEAL- 76
Query: 131 NGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKM 190
I PDA L + + LR+ G+S K +R +A T+ L + M+ +
Sbjct: 77 ---GAITPDAYLGFNEETLRKTGLSRGKFETIRGVALAITEQGLDFSQVDMMEPDAAIET 133
Query: 191 LTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWK 250
LT +KGIG W+ ++++F PD+ P GDL ++K ++ + L P ++ + +W
Sbjct: 134 LTRLKGIGPWTAEIYLLFCAGHPDIFPAGDLALQKAVEHAFDLPARPLPKELIPLAAQWS 193
Query: 251 PYRSVGSWYMWRLMEA 266
P+R + WR A
Sbjct: 194 PHRGAAALMFWRYFSA 209
>gi|220921838|ref|YP_002497139.1| HhH-GPD family protein [Methylobacterium nodulans ORS 2060]
gi|219946444|gb|ACL56836.1| HhH-GPD family protein [Methylobacterium nodulans ORS 2060]
Length = 229
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 99/195 (50%), Gaps = 6/195 (3%)
Query: 80 DPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNILPD 139
DP++A ++ A P + LA I+ QQL+ +A +I+ R L ++ P+
Sbjct: 35 DPVMARIVAAGAVPPLRKRPPGYEGLAGIIVAQQLSTASAGAIWGRLKRLLP---DLTPE 91
Query: 140 AVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIGA 199
A + L+ G+S K LR +AE G L +++ + +++ +V GIG
Sbjct: 92 TFAAAADPDLKAAGLSGPKIRTLRAVAEAVGTGRLPLDALHILGADEAHRLMVAVHGIGP 151
Query: 200 WSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGS-- 257
W+ ++++F L PD P GDL +++ ++ GL PGA ++E E W+P+R V +
Sbjct: 152 WTADVYLLFCLGHPDAFPAGDLALQEAARLADGLDARPGAAALKERAELWRPWRGVAAKV 211
Query: 258 -WYMWRLMEAKGVLP 271
W +R+ +A+ P
Sbjct: 212 LWAYYRVAKARDAAP 226
>gi|254477789|ref|ZP_05091175.1| HhH-GPD [Ruegeria sp. R11]
gi|214032032|gb|EEB72867.1| HhH-GPD [Ruegeria sp. R11]
Length = 217
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/186 (32%), Positives = 93/186 (50%), Gaps = 8/186 (4%)
Query: 76 LRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDN 135
L +DP A + P F L +I+ QQ++ +A +I+ R VA G D
Sbjct: 27 LAGQDPRFADALAQCGPLPLRRKPEGFAELLSAIVSQQVSVASANAIWGRMVA--AGLDR 84
Query: 136 ILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVK 195
A+ S + LR G+S +K Y R LAE D +++ D + LT V
Sbjct: 85 AA--AIQVASDEDLRVAGLSRQKMRYARALAEAEIDF----DALRHAPDDEVIATLTQVS 138
Query: 196 GIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSV 255
GIG W+ ++ +FSL + DV GDL +++G ++L GL + P KM ++ E W P+RSV
Sbjct: 139 GIGTWTAEIYAMFSLGRADVFAHGDLALQEGARLLLGLADRPTPAKMRKIAEAWSPWRSV 198
Query: 256 GSWYMW 261
+ +W
Sbjct: 199 AARVLW 204
>gi|154300990|ref|XP_001550909.1| hypothetical protein BC1G_10633 [Botryotinia fuckeliana B05.10]
Length = 338
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 78/139 (56%), Gaps = 17/139 (12%)
Query: 142 LAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIGAWS 201
+++ +R G+S RKA Y+ LA K+T+G L+ ++ +F L V+G+G WS
Sbjct: 188 ISIETTCIRTAGLSQRKAEYISGLALKFTNGDLTTPFLLTASYEEVFDSLIQVRGLGKWS 247
Query: 202 VHMFMIFSLHKPDVLPVGDLGVRKGLQVLYG--LKELPGAL---------------KMEE 244
V MF F+L + DV GDLGV++G+ L G +++L A +MEE
Sbjct: 248 VEMFACFALKRLDVFSTGDLGVQRGMAALVGRDVEKLKKAGKGAKGGGKWKYMSEKEMEE 307
Query: 245 VCEKWKPYRSVGSWYMWRL 263
+ EK+ PYR++ WYMWR+
Sbjct: 308 IAEKFSPYRTIFMWYMWRV 326
>gi|389571381|ref|ZP_10161477.1| DNA-3-methyladenine glycosylase II [Bacillus sp. M 2-6]
gi|388428942|gb|EIL86731.1| DNA-3-methyladenine glycosylase II [Bacillus sp. M 2-6]
Length = 289
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 95/169 (56%), Gaps = 5/169 (2%)
Query: 102 FLSLAKSILYQQLAYKAAKSIYTRFVALFNGE-DNI----LPDAVLAVSPQQLREIGVSY 156
+ L K I++QQL A + RFV + + D + LP+ + ++ LR++ S
Sbjct: 118 YHCLMKCIIHQQLNLAFAYELTKRFVHTYGEQIDGVWFDPLPETIASLETDDLRKLQFSQ 177
Query: 157 RKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVL 216
RKA Y+ D++++ G L+ E + ++ D+ + + L ++GIG W+V ++ L +P++
Sbjct: 178 RKAEYVIDVSKRIVSGSLNLEELHDLTDIEIEERLLPIRGIGPWTVQNVLMNGLGRPNLF 237
Query: 217 PVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSWYMWRLME 265
P+ D+G++ ++ + L + P +M + ++W PY S S Y+WR +E
Sbjct: 238 PMADIGIQNAIKRHFDLPKKPTKEEMAVLSKEWAPYLSYASLYLWRSIE 286
>gi|45658208|ref|YP_002294.1| 3-methyladenine DNA glycosylase [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|417764435|ref|ZP_12412402.1| base excision DNA repair protein, HhH-GPD family [Leptospira
interrogans serovar Bulgarica str. Mallika]
gi|418667442|ref|ZP_13228853.1| base excision DNA repair protein, HhH-GPD family [Leptospira
interrogans serovar Pyrogenes str. 2006006960]
gi|418700699|ref|ZP_13261641.1| base excision DNA repair protein, HhH-GPD family [Leptospira
interrogans serovar Bataviae str. L1111]
gi|418709768|ref|ZP_13270554.1| base excision DNA repair protein, HhH-GPD family [Leptospira
interrogans serovar Grippotyphosa str. UI 08368]
gi|418716627|ref|ZP_13276590.1| base excision DNA repair protein, HhH-GPD family [Leptospira
interrogans str. UI 08452]
gi|421086975|ref|ZP_15547817.1| base excision DNA repair protein, HhH-GPD family [Leptospira
santarosai str. HAI1594]
gi|421103405|ref|ZP_15564005.1| base excision DNA repair protein, HhH-GPD family [Leptospira
interrogans serovar Icterohaemorrhagiae str. Verdun LP]
gi|45601450|gb|AAS70931.1| 3-methyladenine DNA glycosylase [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|400352879|gb|EJP05055.1| base excision DNA repair protein, HhH-GPD family [Leptospira
interrogans serovar Bulgarica str. Mallika]
gi|410367151|gb|EKP22539.1| base excision DNA repair protein, HhH-GPD family [Leptospira
interrogans serovar Icterohaemorrhagiae str. Verdun LP]
gi|410430457|gb|EKP74826.1| base excision DNA repair protein, HhH-GPD family [Leptospira
santarosai str. HAI1594]
gi|410756613|gb|EKR18232.1| base excision DNA repair protein, HhH-GPD family [Leptospira
interrogans serovar Pyrogenes str. 2006006960]
gi|410760600|gb|EKR26796.1| base excision DNA repair protein, HhH-GPD family [Leptospira
interrogans serovar Bataviae str. L1111]
gi|410770003|gb|EKR45230.1| base excision DNA repair protein, HhH-GPD family [Leptospira
interrogans serovar Grippotyphosa str. UI 08368]
gi|410787398|gb|EKR81130.1| base excision DNA repair protein, HhH-GPD family [Leptospira
interrogans str. UI 08452]
gi|455792374|gb|EMF44136.1| base excision DNA repair protein, HhH-GPD family [Leptospira
interrogans serovar Lora str. TE 1992]
gi|456822540|gb|EMF71010.1| base excision DNA repair protein, HhH-GPD family [Leptospira
interrogans serovar Canicola str. LT1962]
Length = 213
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/187 (32%), Positives = 98/187 (52%), Gaps = 3/187 (1%)
Query: 75 HLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGED 134
L KD L +++ H P F S + F +L IL QQ++ +A++ V L N
Sbjct: 19 QLSRKDRGLHSILLKHGYPPFWSRKPNFETLVHIILEQQVSLASARAA---LVKLKNKIG 75
Query: 135 NILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSV 194
++ +L +S +LRE S +K SY+RDLAE + + D + + L +V
Sbjct: 76 SVTARKILLLSDIELRECYFSRQKTSYVRDLAEFVFSKRIILGDLASKSDQMIREDLITV 135
Query: 195 KGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRS 254
KGIG W+V +F+I +LH+ D+ P+GDL K L+ + L K+ V + W+P+RS
Sbjct: 136 KGIGNWTVDIFLIMALHRADIFPLGDLAAVKSLKKIKKLPVDTSNDKILSVSKSWRPFRS 195
Query: 255 VGSWYMW 261
+ + +W
Sbjct: 196 IATMLLW 202
>gi|310643869|ref|YP_003948627.1| base excision DNA repair protein [Paenibacillus polymyxa SC2]
gi|309248819|gb|ADO58386.1| Base excision DNA repair protein, HhH-GPD family [Paenibacillus
polymyxa SC2]
gi|392304597|emb|CCI70960.1| putative DNA-3-methyladenine glycosidase [Paenibacillus polymyxa
M1]
Length = 205
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 91/162 (56%), Gaps = 4/162 (2%)
Query: 102 FLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNILPDAVLAVSPQQLREIGVSYRKASY 161
F +L +I+ Q ++ KA ++I+TR I P + + Q+++ G++ +KA+
Sbjct: 45 FAALVHAIVGQLISAKAVQTIWTRMQEKLGA---ITPQNIAVQTAQEIQSCGITMKKAAC 101
Query: 162 LRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDL 221
+ ++A+ G+L + + E+ D + + L+S++GIG W+ M +I + +PDV+ GD+
Sbjct: 102 ILNIAQTIEQGLLDLQELYELSDTQVIQKLSSLQGIGPWTAEMMLINCMERPDVVSWGDM 161
Query: 222 GVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSWYMWRL 263
+R+G+ LY L L + EE + PY SV S Y+W +
Sbjct: 162 AIRRGMMKLYHLDTLTKQ-QFEEYRRVYSPYGSVASIYLWSI 202
>gi|417763736|ref|ZP_12411713.1| base excision DNA repair protein, HhH-GPD family [Leptospira
interrogans str. 2002000624]
gi|417773773|ref|ZP_12421648.1| base excision DNA repair protein, HhH-GPD family [Leptospira
interrogans str. 2002000621]
gi|418675116|ref|ZP_13236408.1| base excision DNA repair protein, HhH-GPD family [Leptospira
interrogans str. 2002000623]
gi|409940555|gb|EKN86195.1| base excision DNA repair protein, HhH-GPD family [Leptospira
interrogans str. 2002000624]
gi|410576244|gb|EKQ39251.1| base excision DNA repair protein, HhH-GPD family [Leptospira
interrogans str. 2002000621]
gi|410577688|gb|EKQ45557.1| base excision DNA repair protein, HhH-GPD family [Leptospira
interrogans str. 2002000623]
Length = 213
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/192 (33%), Positives = 102/192 (53%), Gaps = 13/192 (6%)
Query: 75 HLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGED 134
L KD L +++ H P F S + F +L IL QQ++ +A++ V L N
Sbjct: 19 QLSRKDRGLHSILLKHGYPPFWSRKPNFETLVHIILEQQVSLASARAA---LVKLKNKIG 75
Query: 135 NILPDAVLAVSPQQLREIGVSYRKASYLRDLAE-----KYTDGILSDESIVEMDDVTMFK 189
++ +L +S +LRE S +K SY+RDLAE + G LS +S D + +
Sbjct: 76 SVTARKILLLSDIELRECYFSRQKTSYVRDLAEFVFSKRIILGDLSSKS-----DQMIRE 130
Query: 190 MLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKW 249
L +VKGIG W+V +F+I +LH+ D+ P+GDL K L+ + L K+ V + W
Sbjct: 131 DLITVKGIGNWTVDIFLIMALHRADIFPLGDLAAVKSLKKIKKLPVDTSNDKILSVSKSW 190
Query: 250 KPYRSVGSWYMW 261
+P+RS+ + +W
Sbjct: 191 RPFRSIATMLLW 202
>gi|423613862|ref|ZP_17589721.1| hypothetical protein IIM_04575 [Bacillus cereus VD107]
gi|401240462|gb|EJR46863.1| hypothetical protein IIM_04575 [Bacillus cereus VD107]
Length = 287
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 93/169 (55%), Gaps = 5/169 (2%)
Query: 102 FLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNIL-----PDAVLAVSPQQLREIGVSY 156
F L + I++QQ+ K A + +FV + E N + P+ V + ++LRE S
Sbjct: 119 FACLLRCIIHQQINLKFATVLTEQFVKRYGTEKNGVLFFPTPERVANIPIEELREQKFSQ 178
Query: 157 RKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVL 216
RKA Y+ LA++ DG L I + + L ++GIGAW+V F++F L + ++
Sbjct: 179 RKAEYMVGLAKRIVDGKLDLAGIENETEEEVSAQLLPIRGIGAWTVQNFLMFGLGRKNMF 238
Query: 217 PVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSWYMWRLME 265
P D+G+++ LQ ++ L+ P +E+V ++ +PY S + Y+W+ +E
Sbjct: 239 PKADIGIQRALQGVFQLENKPDDAFLEKVKQECEPYCSYAALYLWKSIE 287
>gi|398337795|ref|ZP_10522500.1| 3-methyladenine DNA glycosylase [Leptospira kmetyi serovar Malaysia
str. Bejo-Iso9]
Length = 213
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/189 (32%), Positives = 97/189 (51%), Gaps = 9/189 (4%)
Query: 76 LRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDN 135
L KD L +++ + P F S + F +L IL QQ++ +AK+ +
Sbjct: 20 LSRKDRDLHSILLKYGYPPFWSRKPNFETLVHIILEQQVSLASAKAALEKLKERIGA--- 76
Query: 136 ILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVK 195
+ VL +S +LRE S +K Y+R LA G L+ S+ E D + L ++K
Sbjct: 77 VTAKKVLLLSDIELRECYFSRQKTVYVRHLANAVLSGQLAIGSLSEKTDEEIRNDLVAIK 136
Query: 196 GIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEV---CEKWKPY 252
GIG W+V +F++ LH+ D+ P+GDL + +Q L +K LP + E + E WKP+
Sbjct: 137 GIGNWTVDVFLLMVLHRSDIFPIGDLAL---IQSLKKVKRLPADVSKERILSIAETWKPF 193
Query: 253 RSVGSWYMW 261
RSV + +W
Sbjct: 194 RSVAAMILW 202
>gi|358449340|ref|ZP_09159826.1| HhH-GPD family protein [Marinobacter manganoxydans MnI7-9]
gi|357226362|gb|EHJ04841.1| HhH-GPD family protein [Marinobacter manganoxydans MnI7-9]
Length = 238
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 100/194 (51%), Gaps = 11/194 (5%)
Query: 64 TFKGEVDIALRHLRDKDP-LLATLIDAHRPPTFESSRSP-FLSLAKSILYQQLAYKAAKS 121
T K VD+ L +KDP L PP + +R P F SL IL QQ++ KAA +
Sbjct: 10 TLKMGVDV----LAEKDPDLYEVRARLGYPPIW--TREPGFASLIHIILEQQVSLKAAAT 63
Query: 122 IYTRFVALFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVE 181
++ R + ++ P+ V +LR +G++ +K+ Y +LA + TDG L + +
Sbjct: 64 MFQRLASHLG---SVTPELVQRAGEPELRRVGLTRQKSRYCVELANRITDGKLDLAQVEK 120
Query: 182 MDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALK 241
+DDV L V G+G W+V ++ + +L +PDV P GDL + +Q + L P +
Sbjct: 121 LDDVQGRSHLLEVPGLGPWTVDIYYMMALRRPDVWPQGDLALASAIQDIKNLDARPTKEE 180
Query: 242 MEEVCEKWKPYRSV 255
E+W P+R++
Sbjct: 181 QLAFAEQWAPWRAL 194
>gi|417783831|ref|ZP_12431546.1| base excision DNA repair protein, HhH-GPD family [Leptospira
interrogans str. C10069]
gi|409953037|gb|EKO07541.1| base excision DNA repair protein, HhH-GPD family [Leptospira
interrogans str. C10069]
Length = 213
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/187 (32%), Positives = 98/187 (52%), Gaps = 3/187 (1%)
Query: 75 HLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGED 134
L KD L +++ H P F S + F +L IL QQ++ +A++ V L N
Sbjct: 19 QLSRKDRGLHSILLKHGYPPFWSRKPNFETLVHIILEQQVSLASARAA---LVKLKNKIG 75
Query: 135 NILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSV 194
++ +L +S +LRE S +K SY+RDLAE + + D + + L +V
Sbjct: 76 SVTARKILLLSDIELRECYFSRQKTSYVRDLAEFVFSKRIILGDLASKSDQMIREDLITV 135
Query: 195 KGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRS 254
KGIG W+V +F+I +LH+ D+ P+GDL K L+ + L K+ V + W+P+RS
Sbjct: 136 KGIGNWTVDIFLIMALHRADIFPLGDLAAVKSLKKIKKLPVDTSNDKILSVSKSWRPFRS 195
Query: 255 VGSWYMW 261
+ + +W
Sbjct: 196 IAAMLLW 202
>gi|417771226|ref|ZP_12419122.1| base excision DNA repair protein, HhH-GPD family [Leptospira
interrogans serovar Pomona str. Pomona]
gi|418682342|ref|ZP_13243561.1| base excision DNA repair protein, HhH-GPD family [Leptospira
interrogans serovar Pomona str. Kennewicki LC82-25]
gi|418706348|ref|ZP_13267196.1| base excision DNA repair protein, HhH-GPD family [Leptospira
interrogans serovar Hebdomadis str. R499]
gi|421115015|ref|ZP_15575429.1| base excision DNA repair protein, HhH-GPD family [Leptospira
interrogans serovar Canicola str. Fiocruz LV133]
gi|400326000|gb|EJO78270.1| base excision DNA repair protein, HhH-GPD family [Leptospira
interrogans serovar Pomona str. Kennewicki LC82-25]
gi|409946851|gb|EKN96859.1| base excision DNA repair protein, HhH-GPD family [Leptospira
interrogans serovar Pomona str. Pomona]
gi|410013736|gb|EKO71813.1| base excision DNA repair protein, HhH-GPD family [Leptospira
interrogans serovar Canicola str. Fiocruz LV133]
gi|410763973|gb|EKR34692.1| base excision DNA repair protein, HhH-GPD family [Leptospira
interrogans serovar Hebdomadis str. R499]
gi|455666562|gb|EMF31976.1| base excision DNA repair protein, HhH-GPD family [Leptospira
interrogans serovar Pomona str. Fox 32256]
Length = 213
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/187 (32%), Positives = 98/187 (52%), Gaps = 3/187 (1%)
Query: 75 HLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGED 134
L KD L +++ H P F S + F +L IL QQ++ +A++ V L N
Sbjct: 19 QLSRKDRGLHSILLKHGYPPFWSRKPNFETLVHIILEQQVSLASARAA---LVKLKNKIG 75
Query: 135 NILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSV 194
++ +L +S +LRE S +K SY+RDLAE + + D + + L +V
Sbjct: 76 SVTARKILLLSDIELRECYFSRQKTSYVRDLAEFVFSKRIILGDLASKSDQMIREDLIAV 135
Query: 195 KGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRS 254
KGIG W+V +F+I +LH+ D+ P+GDL K L+ + L K+ V + W+P+RS
Sbjct: 136 KGIGNWTVDIFLIMALHRADIFPLGDLAAVKSLKKIKKLPVDTSNDKILSVSKSWRPFRS 195
Query: 255 VGSWYMW 261
+ + +W
Sbjct: 196 IATMLLW 202
>gi|172057079|ref|YP_001813539.1| HhH-GPD family protein [Exiguobacterium sibiricum 255-15]
gi|171989600|gb|ACB60522.1| HhH-GPD family protein [Exiguobacterium sibiricum 255-15]
Length = 273
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 96/182 (52%), Gaps = 16/182 (8%)
Query: 94 TFESSR-----SPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDN--ILP---DAVLA 143
TF + R +PF +L +SI++QQ+ A+ + RF F E N I P + ++
Sbjct: 98 TFGAERLVLDINPFTALIRSIIHQQINLAFAQVLMERFCRTFGTEQNGVIFPPTAEQLVN 157
Query: 144 VSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIGAWSVH 203
V P+QLR + +S RK YL A D E + E D T+ + L ++KG+G W+V
Sbjct: 158 VEPEQLRALQLSGRKVDYLLGAARAAIDF----ERLTEAPDATIAETLIALKGVGPWTVQ 213
Query: 204 MFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSWYMWRL 263
++F + D+ P D+G+ + + L+G + P + + E++ PYRS ++ +WR
Sbjct: 214 NVLMFGYGREDLFPASDIGILRAFERLHGTR--PSVEEAVLLAEEFAPYRSHAAYLLWRS 271
Query: 264 ME 265
+E
Sbjct: 272 IE 273
>gi|395803037|ref|ZP_10482288.1| HhH-GPD family protein [Flavobacterium sp. F52]
gi|395434855|gb|EJG00798.1| HhH-GPD family protein [Flavobacterium sp. F52]
Length = 199
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 105/198 (53%), Gaps = 21/198 (10%)
Query: 72 ALRHLRDKDPLLATLIDAH-------RPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYT 124
A+ L +K+P+ +I+ + RPP FE+ L IL QQ++ +AK+ +
Sbjct: 4 AIDFLTNKNPIFLQIIEKYGLPPIPRRPPGFET-------LVLLILEQQVSIDSAKATFL 56
Query: 125 RFVALFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDD 184
+ A P+ ++ +S ++ R +GVS +K Y++ LAE + L ES+
Sbjct: 57 KIKAFTTCN----PENMVLLSDEEFRSLGVSRQKTKYIKILAEAVLNKELDIESLASKSA 112
Query: 185 VTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEE 244
+ + L +KGIG W++ ++++F L +PD++P+GD+ V ++ L + + +ME
Sbjct: 113 KQVREELIKLKGIGNWTIDIYLMFCLEEPDLIPLGDIAVINTIKELLNIHD---KQEMEI 169
Query: 245 VCEKWKPYRSVGSWYMWR 262
E+W P+RS ++ +W
Sbjct: 170 HAEQWSPFRSYATYLLWH 187
>gi|228995799|ref|ZP_04155459.1| DNA-3-methyladenine glycosylase II [Bacillus mycoides Rock3-17]
gi|228763960|gb|EEM12847.1| DNA-3-methyladenine glycosylase II [Bacillus mycoides Rock3-17]
Length = 291
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 105/198 (53%), Gaps = 11/198 (5%)
Query: 75 HLRDKD--PLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNG 132
H R+ PL T A+ P E F L + I++QQ+ K A S+ +FV +
Sbjct: 98 HFRNTSLRPLFETY--AYTPLVLEFDY--FACLLRCIIHQQVHLKFATSLTEQFVKRYGT 153
Query: 133 EDNIL-----PDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTM 187
E N + P+ V +S ++LR S RKA Y+ LA+ +G L+ + + + +
Sbjct: 154 EKNGVFFFPTPERVANISIEELRNQKFSQRKAEYMVGLAKHIVEGKLNLVELEKQTEEVV 213
Query: 188 FKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCE 247
L V+GIGAW+V F++F L + ++ P D+G+++ LQ ++ L+ P +E++ +
Sbjct: 214 AAQLLPVRGIGAWTVQNFLLFGLGRKNMFPKADIGIQRALQGIFQLENKPDDAFLEKMKQ 273
Query: 248 KWKPYRSVGSWYMWRLME 265
+ +PY S + Y+W+ +E
Sbjct: 274 ECEPYCSYAALYLWKSIE 291
>gi|384184499|ref|YP_005570395.1| DNA-3-methyladenine glycosylase II [Bacillus thuringiensis serovar
chinensis CT-43]
gi|410672788|ref|YP_006925159.1| putative DNA-3-methyladenine glycosylase YfjP [Bacillus
thuringiensis Bt407]
gi|452196794|ref|YP_007476875.1| DNA-3-methyladenine glycosylase II [Bacillus thuringiensis serovar
thuringiensis str. IS5056]
gi|326938208|gb|AEA14104.1| DNA-3-methyladenine glycosylase II [Bacillus thuringiensis serovar
chinensis CT-43]
gi|409171917|gb|AFV16222.1| putative DNA-3-methyladenine glycosylase YfjP [Bacillus
thuringiensis Bt407]
gi|452102187|gb|AGF99126.1| DNA-3-methyladenine glycosylase II [Bacillus thuringiensis serovar
thuringiensis str. IS5056]
Length = 287
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 100/190 (52%), Gaps = 9/190 (4%)
Query: 81 PLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNIL--- 137
PL T A+ P E F L + I++QQ+ K A + +FV + E N +
Sbjct: 102 PLFETY--AYTPIILEFDY--FACLLRCIIHQQINLKFATVLTEQFVKRYGTEKNGVFFF 157
Query: 138 --PDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVK 195
P+ V +S ++LRE S RKA Y+ L G L+ SI + + L ++
Sbjct: 158 PTPEIVANISIEELREQKFSQRKAEYIVGLGRSIVSGTLNLASIENETEEEVSAQLLPIR 217
Query: 196 GIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSV 255
GIGAW+V F++F L + ++ P D+G+++ +Q ++ L + P + +E+V ++ +PY S
Sbjct: 218 GIGAWTVQNFLMFGLGRKNMFPKADIGIQRAVQGIFQLDDKPDDVFLEKVKQECEPYCSY 277
Query: 256 GSWYMWRLME 265
+ Y+W+ +E
Sbjct: 278 AALYLWKSIE 287
>gi|238758090|ref|ZP_04619270.1| Methylated-DNA--protein-cysteine methyltransferase [Yersinia
aldovae ATCC 35236]
gi|238703628|gb|EEP96165.1| Methylated-DNA--protein-cysteine methyltransferase [Yersinia
aldovae ATCC 35236]
Length = 201
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 101/197 (51%), Gaps = 6/197 (3%)
Query: 67 GEVDIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRF 126
GE +I HL+ +D +A I+ T SR F +L ++I+ QQ++ KAA ++ R
Sbjct: 6 GETEI--NHLKQRDKKMAAAIERLGMITRPLSRDLFSALIRNIIDQQISVKAALTVNARL 63
Query: 127 VALFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVT 186
AL + P V A + + ++ G++ RKA Y++ A+ +G L SI + D
Sbjct: 64 RALLG---TVTPMTVAATTVEAIQRCGMTMRKAGYIKGAADAALNGSLDLSSISLLSDDE 120
Query: 187 MFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVC 246
+ L+ + G+G W+ M +I SL +PDV+ GDL +R+G+ LY K LP
Sbjct: 121 VISQLSRLDGVGIWTAEMLLISSLARPDVVSWGDLAIRRGMMNLYHHKTLPRERFERYRR 180
Query: 247 EKWKPYRSVGSWYMWRL 263
PY + S Y+W L
Sbjct: 181 RY-APYGTTASLYLWAL 196
>gi|423434089|ref|ZP_17411070.1| hypothetical protein IE9_00270 [Bacillus cereus BAG4X12-1]
gi|401127358|gb|EJQ35084.1| hypothetical protein IE9_00270 [Bacillus cereus BAG4X12-1]
Length = 287
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 99/190 (52%), Gaps = 9/190 (4%)
Query: 81 PLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNIL--- 137
PL T AH P E F L + I++QQ+ K A + +FV + E N +
Sbjct: 102 PLFETY--AHTPIILEFDY--FACLLRCIIHQQINLKFATVLTEQFVKRYGTEKNGVFFF 157
Query: 138 --PDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVK 195
P+ V +S ++LRE S RKA Y+ L G L+ SI + + L ++
Sbjct: 158 PTPEIVANISIEELREQKFSQRKAEYIVGLGRSIVSGTLNLASIENGTEEDISAQLLPIR 217
Query: 196 GIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSV 255
GIGAW+V F++F L + ++ P D+G+++ +Q ++ L + P +E++ ++ +PY S
Sbjct: 218 GIGAWTVQNFLMFGLGRKNMFPKADIGIQRAVQGIFQLDDKPDDAFLEKLKQECEPYCSY 277
Query: 256 GSWYMWRLME 265
+ Y+W+ +E
Sbjct: 278 AALYLWKSIE 287
>gi|228937722|ref|ZP_04100356.1| DNA-3-methyladenine glycosylase II [Bacillus thuringiensis serovar
berliner ATCC 10792]
gi|228970602|ref|ZP_04131250.1| DNA-3-methyladenine glycosylase II [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228977181|ref|ZP_04137580.1| DNA-3-methyladenine glycosylase II [Bacillus thuringiensis Bt407]
gi|228782490|gb|EEM30669.1| DNA-3-methyladenine glycosylase II [Bacillus thuringiensis Bt407]
gi|228789068|gb|EEM36999.1| DNA-3-methyladenine glycosylase II [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228821930|gb|EEM67924.1| DNA-3-methyladenine glycosylase II [Bacillus thuringiensis serovar
berliner ATCC 10792]
Length = 291
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 100/190 (52%), Gaps = 9/190 (4%)
Query: 81 PLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNIL--- 137
PL T A+ P E F L + I++QQ+ K A + +FV + E N +
Sbjct: 106 PLFETY--AYTPIILEFDY--FACLLRCIIHQQINLKFATVLTEQFVKRYGTEKNGVFFF 161
Query: 138 --PDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVK 195
P+ V +S ++LRE S RKA Y+ L G L+ SI + + L ++
Sbjct: 162 PTPEIVANISIEELREQKFSQRKAEYIVGLGRSIVSGTLNLASIENETEEEVSAQLLPIR 221
Query: 196 GIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSV 255
GIGAW+V F++F L + ++ P D+G+++ +Q ++ L + P + +E+V ++ +PY S
Sbjct: 222 GIGAWTVQNFLMFGLGRKNMFPKADIGIQRAVQGIFQLDDKPDDVFLEKVKQECEPYCSY 281
Query: 256 GSWYMWRLME 265
+ Y+W+ +E
Sbjct: 282 AALYLWKSIE 291
>gi|295101942|emb|CBK99487.1| DNA-3-methyladenine glycosylase II [Faecalibacterium prausnitzii
L2-6]
Length = 198
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 92/172 (53%), Gaps = 6/172 (3%)
Query: 102 FLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNILPDAVLAVSPQQLREIGVSYRKASY 161
F ++ I+ QQ++ KA +I+ R F D AVL ++L+ G+++RKA Y
Sbjct: 20 FSAVVHHIVGQQISTKAQATIWKRMRDEFGVVDAA---AVLGAGVEKLQSFGMTFRKAEY 76
Query: 162 LRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDL 221
+ D A K G E I + D + L+ +KG+G W+ M ++F + +PDV DL
Sbjct: 77 ITDFARKIESGEFDLEGIWQKPDDEAIRELSGLKGVGVWTAEMILLFCMQRPDVFSYDDL 136
Query: 222 GVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSWYMWRLMEAKGVLPNV 273
+++GL+++Y +++ L E+ ++ PY SV S Y+W A G +P +
Sbjct: 137 AIQRGLRMVYHHRKIDRKL-FEKYRRRFSPYCSVASLYLW--AAAGGAVPGL 185
>gi|423398622|ref|ZP_17375823.1| hypothetical protein ICU_04316 [Bacillus cereus BAG2X1-1]
gi|423409526|ref|ZP_17386675.1| hypothetical protein ICY_04211 [Bacillus cereus BAG2X1-3]
gi|401646790|gb|EJS64405.1| hypothetical protein ICU_04316 [Bacillus cereus BAG2X1-1]
gi|401655146|gb|EJS72681.1| hypothetical protein ICY_04211 [Bacillus cereus BAG2X1-3]
Length = 287
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 93/169 (55%), Gaps = 5/169 (2%)
Query: 102 FLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNIL-----PDAVLAVSPQQLREIGVSY 156
F L + I++QQ+ K A + +FV + E N + P+ V +S ++LRE S
Sbjct: 119 FACLLRCIIHQQINLKFATVLTEQFVKRYGIEKNGVFFFPTPEIVANISIEELREQKFSQ 178
Query: 157 RKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVL 216
RKA Y+ LA+ DG L SI + + L ++GIGAW+V F++F L + ++
Sbjct: 179 RKAEYIVGLAKHIVDGKLDLASIETRAEEEVSAQLLPIRGIGAWTVQNFLMFGLGRKNMF 238
Query: 217 PVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSWYMWRLME 265
P D+G+++ +Q ++ L + P +E V ++ +PY S + Y+W+ +E
Sbjct: 239 PKADIGIQRAVQGIFQLDDKPDDAFLENVKQECEPYCSYAALYLWKSIE 287
>gi|429767709|ref|ZP_19299896.1| base excision DNA repair protein, HhH-GPD family [Brevundimonas
diminuta 470-4]
gi|429189868|gb|EKY30684.1| base excision DNA repair protein, HhH-GPD family [Brevundimonas
diminuta 470-4]
Length = 217
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 91/171 (53%), Gaps = 4/171 (2%)
Query: 93 PTFESSRSP--FLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNILPDAVLAVSPQQLR 150
P FE P + L + I+ QQ++ AA SI+ R V +G+ + P+AVLA LR
Sbjct: 32 PVFEWRLRPGGYEGLFRMIVEQQVSVAAAASIWKRVVEGLDGQ--VTPEAVLARDVDTLR 89
Query: 151 EIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSL 210
G+S +KA Y ++A TDG + + + +DD L ++KG+G W+ F++F
Sbjct: 90 TFGLSGQKAKYGHEIARAQTDGHIDFDHLERLDDAQAIAALVAIKGVGRWTAETFLMFCE 149
Query: 211 HKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSWYMW 261
+ DV P GD+ +++ ++ ++ P + E W+P+R+V + +W
Sbjct: 150 GRLDVFPGGDVALQEAMRWADRAEDRPNEKQAYARAEIWRPHRAVAAHLLW 200
>gi|88601823|ref|YP_502001.1| HhH-GPD [Methanospirillum hungatei JF-1]
gi|88187285|gb|ABD40282.1| HhH-GPD [Methanospirillum hungatei JF-1]
Length = 309
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 105/206 (50%), Gaps = 15/206 (7%)
Query: 80 DPLLATLIDAHRPPTFESSRSP--FLSLAKSILYQQLAYKAAKSIYTRFVALF------N 131
DP++ +L AHR S +P F +L S++ QQ++ A+S+ RF+ F N
Sbjct: 104 DPVMKSL--AHRLDGLRSPATPTVFEALIDSVIEQQISLSVARSLEYRFIRQFGRTCFVN 161
Query: 132 GEDNI---LPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEM-DDVTM 187
G+ + LP+ + + P R G + RK Y+RD++ G L ES ++ D+ +
Sbjct: 162 GDLHYCYPLPEDLAGLEPSDFRRCGFTSRKGEYIRDISRSIEKGNLDLESFKKVRDNADI 221
Query: 188 FKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCE 247
+ L ++GIG W+ + M+ LH+ D P D+ +R+ + Y + A + + E
Sbjct: 222 VEALCQIRGIGRWTAELTMLRGLHRMDAFPADDIALRRMISRWYHNGKKISASEAVKTAE 281
Query: 248 KWKPYRSVGSWYMWRLMEAKGVLPNV 273
+W Y+ + S+Y+ + E G++P V
Sbjct: 282 QWGEYKGLASFYL-EVAEYCGIIPGV 306
>gi|383774648|ref|YP_005453717.1| DNA-3-methyladenine glycosidase II [Bradyrhizobium sp. S23321]
gi|381362775|dbj|BAL79605.1| DNA-3-methyladenine glycosidase II [Bradyrhizobium sp. S23321]
Length = 215
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 101/212 (47%), Gaps = 7/212 (3%)
Query: 63 LTFKGEVDIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSI 122
L + +++ A+ L +DP L ++D P F LA + QQL+ +A +I
Sbjct: 5 LETQSDLEEAVHALVKRDPRLKPVLDIAGMPALRRREPGFTGLAHIVCGQQLSTASASAI 64
Query: 123 YTRFVALFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEM 182
+ R FN D+ DAV +L +G+S K L+ LA + T L+ + + E
Sbjct: 65 WGRLSTAFNPFDH---DAVRRARTDRLGRLGLSAAKIKTLKHLAREITAERLNLDVLAEE 121
Query: 183 DDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKM 242
D L ++ GIG W+ ++++F L D P GDL V++G+++ GL+ P +M
Sbjct: 122 DADAAHHTLIALPGIGPWTADVYLLFCLGHGDAWPAGDLAVQEGIKIGLGLQARPTEKQM 181
Query: 243 EEVCEKWKPYRSVGSWYMWRLMEA----KGVL 270
+ E W+P R + W A +GVL
Sbjct: 182 APLAEPWRPLRGAAAHLWWSYYRAVKKREGVL 213
>gi|93006271|ref|YP_580708.1| hypothetical protein Pcryo_1445 [Psychrobacter cryohalolentis K5]
gi|92393949|gb|ABE75224.1| HhH-GPD [Psychrobacter cryohalolentis K5]
Length = 219
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 93/182 (51%), Gaps = 8/182 (4%)
Query: 80 DPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNILPD 139
+P +++ + P + F L ++I+ QQL+ AA SI+ + L N + P
Sbjct: 32 EPKFSSIYEQVGAPDLRRNTGGFEQLMRAIIGQQLSVAAASSIWKK---LLNA-NLTSPQ 87
Query: 140 AVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIGA 199
++ V LR G+S +K Y R L E D E++ + D + ++LT+V GIG
Sbjct: 88 TIIQVEDDILRTQGLSKQKIRYTRSLVEHDIDF----EALTTISDKEVLEILTAVVGIGC 143
Query: 200 WSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSWY 259
W+ M+++FSL + DVL V DL ++ L GL E P +++ + W P+RS S
Sbjct: 144 WTAEMYLLFSLGRADVLAVDDLAIKVAAMDLLGLAERPTPKQLKMATKDWSPHRSAASLL 203
Query: 260 MW 261
+W
Sbjct: 204 LW 205
>gi|423480565|ref|ZP_17457255.1| hypothetical protein IEQ_00343 [Bacillus cereus BAG6X1-2]
gi|401147501|gb|EJQ55003.1| hypothetical protein IEQ_00343 [Bacillus cereus BAG6X1-2]
Length = 287
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 93/169 (55%), Gaps = 5/169 (2%)
Query: 102 FLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNIL-----PDAVLAVSPQQLREIGVSY 156
F L + I++QQ+ K A + +FV + E N + P+ V +S ++LRE S
Sbjct: 119 FACLLRCIIHQQINLKFATVLTEQFVKRYGIEKNGVFFFPTPEIVANISIEELREQKFSQ 178
Query: 157 RKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVL 216
RKA Y+ LA+ DG L SI + + L ++GIGAW+V F++F L + ++
Sbjct: 179 RKAEYIVGLAKHIVDGKLDLASIETRAEEEVSAQLLPIRGIGAWTVQNFLMFGLGRKNMF 238
Query: 217 PVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSWYMWRLME 265
P D+G+++ +Q ++ L + P +E V ++ +PY S + Y+W+ +E
Sbjct: 239 PKADIGIQRAVQGVFQLDDKPDDAFLENVKQECEPYCSYAALYLWKSIE 287
>gi|379008426|ref|YP_005257877.1| DNA-3-methyladenine glycosylase II [Sulfobacillus acidophilus DSM
10332]
gi|361054688|gb|AEW06205.1| DNA-3-methyladenine glycosylase II [Sulfobacillus acidophilus DSM
10332]
Length = 296
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 88/172 (51%), Gaps = 11/172 (6%)
Query: 101 PFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNILPDAVLAVSP----------QQLR 150
PF SL ++++ QQ+ A + R V + G D L V P ++
Sbjct: 122 PFESLVRTVIGQQIHVAVAAKLVDRLV-VRAGRRITFEDISLGVFPRADTLRHWSSEEWT 180
Query: 151 EIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSL 210
+G S KA YL LA D + ++ EM D + K L + GIG W+ F+IF L
Sbjct: 181 ALGFSAPKARYLTTLAAVAADEGWNGKTFQEMSDDAVMKRLLPLPGIGRWTAECFLIFGL 240
Query: 211 HKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSWYMWR 262
+ DV+P GDLG+++ LQ LYG + P ++ EV ++P+RS+ + Y+W+
Sbjct: 241 GRLDVVPAGDLGLQRALQRLYGWSQKPSESEVREVLAPFQPWRSLATLYLWQ 292
>gi|24214070|ref|NP_711551.1| 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase
[Leptospira interrogans serovar Lai str. 56601]
gi|386073568|ref|YP_005987885.1| 3-methyladenine DNA glycosylase [Leptospira interrogans serovar Lai
str. IPAV]
gi|418689929|ref|ZP_13251048.1| base excision DNA repair protein, HhH-GPD family [Leptospira
interrogans str. FPW2026]
gi|418724348|ref|ZP_13283168.1| base excision DNA repair protein, HhH-GPD family [Leptospira
interrogans str. UI 12621]
gi|421122798|ref|ZP_15583081.1| base excision DNA repair protein, HhH-GPD family [Leptospira
interrogans str. Brem 329]
gi|421127120|ref|ZP_15587344.1| base excision DNA repair protein, HhH-GPD family [Leptospira
interrogans serovar Grippotyphosa str. 2006006986]
gi|421132757|ref|ZP_15592917.1| base excision DNA repair protein, HhH-GPD family [Leptospira
interrogans serovar Grippotyphosa str. Andaman]
gi|24194947|gb|AAN48569.1| 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase
[Leptospira interrogans serovar Lai str. 56601]
gi|353457357|gb|AER01902.1| 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase
[Leptospira interrogans serovar Lai str. IPAV]
gi|400361118|gb|EJP17087.1| base excision DNA repair protein, HhH-GPD family [Leptospira
interrogans str. FPW2026]
gi|409962297|gb|EKO26036.1| base excision DNA repair protein, HhH-GPD family [Leptospira
interrogans str. UI 12621]
gi|410022932|gb|EKO89697.1| base excision DNA repair protein, HhH-GPD family [Leptospira
interrogans serovar Grippotyphosa str. Andaman]
gi|410344698|gb|EKO95864.1| base excision DNA repair protein, HhH-GPD family [Leptospira
interrogans str. Brem 329]
gi|410435210|gb|EKP84342.1| base excision DNA repair protein, HhH-GPD family [Leptospira
interrogans serovar Grippotyphosa str. 2006006986]
Length = 213
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/187 (32%), Positives = 97/187 (51%), Gaps = 3/187 (1%)
Query: 75 HLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGED 134
L KD L +++ H P F S + F +L IL QQ++ +A++ V L N
Sbjct: 19 QLSRKDRGLHSILLKHGYPPFWSRKPNFETLVHIILEQQVSLASARAA---LVKLKNKIG 75
Query: 135 NILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSV 194
++ +L +S +LRE S +K SY+RDLAE + + D + L +V
Sbjct: 76 SVTARKILLLSDIELRECYFSRQKTSYVRDLAEFVFSKRIILGDLASKSDQMIRGDLITV 135
Query: 195 KGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRS 254
KGIG W+V +F+I +LH+ D+ P+GDL K L+ + L K+ V + W+P+RS
Sbjct: 136 KGIGNWTVDIFLIMALHRADIFPLGDLAAVKSLKKIKKLPVDTSNDKILSVSKSWRPFRS 195
Query: 255 VGSWYMW 261
+ + +W
Sbjct: 196 IATMLLW 202
>gi|339627193|ref|YP_004718836.1| DNA-3-methyladenine glycosylase II [Sulfobacillus acidophilus TPY]
gi|339284982|gb|AEJ39093.1| putative DNA-3-methyladenine glycosylase II [Sulfobacillus
acidophilus TPY]
Length = 300
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 88/172 (51%), Gaps = 11/172 (6%)
Query: 101 PFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNILPDAVLAVSP----------QQLR 150
PF SL ++++ QQ+ A + R V + G D L V P ++
Sbjct: 126 PFESLVRTVIGQQIHVAVAAKLVDRLV-VRAGRRITFEDISLGVFPRADTLRHWSSEEWT 184
Query: 151 EIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSL 210
+G S KA YL LA D + ++ EM D + K L + GIG W+ F+IF L
Sbjct: 185 ALGFSAPKARYLTTLAAVAADEGWNGKTFQEMSDDAVMKRLLPLPGIGRWTAECFLIFGL 244
Query: 211 HKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSWYMWR 262
+ DV+P GDLG+++ LQ LYG + P ++ EV ++P+RS+ + Y+W+
Sbjct: 245 GRLDVVPAGDLGLQRALQRLYGWSQKPSESEVREVLAPFQPWRSLATLYLWQ 296
>gi|383449793|ref|YP_005356514.1| DNA-3-methyladenine glycosylase, partial [Flavobacterium indicum
GPTSA100-9]
gi|380501415|emb|CCG52457.1| Probable DNA-3-methyladenine glycosylase [Flavobacterium indicum
GPTSA100-9]
Length = 197
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 103/189 (54%), Gaps = 6/189 (3%)
Query: 73 LRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNG 132
++ L +P +ID P ++ F++L + IL QQ++ +A++ + + +
Sbjct: 5 IKQLSTIEPKFQNIIDEFGLPEIKTRPQGFVALVQLILEQQVSIASAEACFRKIESKIQ- 63
Query: 133 EDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLT 192
+ P +L++S ++L+ GVS +K +YL++LAE+ ++ ++ + F+ L
Sbjct: 64 --KVEPLPLLSLSDEELKACGVSRQKINYLKNLAEQIILQTFDPLNLEQLSEKEAFQELV 121
Query: 193 SVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPY 252
+KGIG W+ ++++F L K ++ P+GD+ +++ + ++ K L +W+PY
Sbjct: 122 QLKGIGKWTAEVYLMFCLQKKNIFPIGDIAIQRAMTDIFDCKTTDEMLLK---ANQWEPY 178
Query: 253 RSVGSWYMW 261
R++ S+ +W
Sbjct: 179 RTLASYLLW 187
>gi|71003722|ref|XP_756527.1| hypothetical protein UM00380.1 [Ustilago maydis 521]
gi|46095691|gb|EAK80924.1| hypothetical protein UM00380.1 [Ustilago maydis 521]
Length = 447
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 92/173 (53%), Gaps = 21/173 (12%)
Query: 102 FLSLAKSILYQQLAYKAAKSIYTRFVALFNGE------DNI----------LPDAVLAVS 145
F ++ SIL QQ+++ AA+S+ +F LF+ + D + P VL
Sbjct: 163 FRTVTTSILGQQISWLAARSVLYKFCRLFSPDSMPEKPDFVGFPREQWPFPTPLMVLRTP 222
Query: 146 PQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDV-TMFKMLTSVKGIGAWSVHM 204
+LR G+S+ K Y++DLA ++ DG L I+E+DD L+ VKG+G W+ M
Sbjct: 223 DAELRAAGLSFAKIKYVKDLAARFVDGRLDIRQILELDDEEACVAELSKVKGVGRWTSEM 282
Query: 205 FMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGS 257
++F++ KPD+LP DLGV+KG+ + L GA + +K KP G+
Sbjct: 283 ILMFAMRKPDILPCADLGVQKGMLNFF----LSGAQGPKISVKKRKPGEEEGT 331
>gi|149186216|ref|ZP_01864530.1| HhH-GPD [Erythrobacter sp. SD-21]
gi|148830247|gb|EDL48684.1| HhH-GPD [Erythrobacter sp. SD-21]
Length = 205
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 93/183 (50%), Gaps = 3/183 (1%)
Query: 79 KDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNILP 138
+DP++A I P + + +L ++I+ QQ++ AA S++ + A GED +
Sbjct: 18 QDPVVAGAIQRVGYPEERIRPTGYRTLLRTIVGQQVSVAAASSVWGKLEAEL-GED-MHT 75
Query: 139 DAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIG 198
+LA LR G+S +K Y R L E G L E++ + DD LT +KGIG
Sbjct: 76 GELLARDFDTLRACGLSRQKQGYARSLCELVEGGELDLENLPQ-DDEAAIAELTRIKGIG 134
Query: 199 AWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSW 258
WS ++++F+ + D+ P GDL V+ L+ L E P + + E WKPYR +
Sbjct: 135 RWSAEIYLLFAEGRQDIWPAGDLAVQAACGKLFDLSERPSEKRTRALAEGWKPYRGAMAI 194
Query: 259 YMW 261
+ W
Sbjct: 195 FTW 197
>gi|335037410|ref|ZP_08530716.1| DNA-3-methyladenine glycosidase II [Agrobacterium sp. ATCC 31749]
gi|333791075|gb|EGL62466.1| DNA-3-methyladenine glycosidase II [Agrobacterium sp. ATCC 31749]
Length = 218
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 97/202 (48%), Gaps = 2/202 (0%)
Query: 60 FKPLTFKGEVDIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAA 119
K +T ++ L HL DP L+ +I+ P F LA ++ Q ++ +A
Sbjct: 4 MKIITGMDDISEGLDHLARLDPALSPVIEKAGPLELRIHEPGFAGLAHIVVSQMVSRASA 63
Query: 120 KSIYTRFVALFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESI 179
+I+ R +A GE + + LA S + G+S KA+ L LA T+G + + +
Sbjct: 64 NAIWARILAGTGGE--VTAENYLAASEELRATFGLSRAKATTLEGLARAVTEGQVDLDGV 121
Query: 180 VEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGA 239
V + F L +++GIG W+ ++++F PD+ PVGD+ +R + L+ P A
Sbjct: 122 VRKEAGAAFSELVALRGIGPWTAEVYLMFCGGHPDIFPVGDVALRSAVAHALDLEVRPDA 181
Query: 240 LKMEEVCEKWKPYRSVGSWYMW 261
+ E W P+RSV + W
Sbjct: 182 KWLAERATLWSPWRSVAARLFW 203
>gi|27376482|ref|NP_768011.1| DNA-3-methyladenine glycosidase II [Bradyrhizobium japonicum USDA
110]
gi|27349622|dbj|BAC46636.1| DNA-3-methyladenine glycosidase II [Bradyrhizobium japonicum USDA
110]
Length = 246
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 107/226 (47%), Gaps = 7/226 (3%)
Query: 63 LTFKGEVDIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSI 122
L + +++ A+ L +DP L ++ A P F LA + QQL+ +A +I
Sbjct: 5 LETQSDLEEAVHALVKRDPRLKPVLAAAGMPALRRREPGFPGLAHIVCGQQLSTASAAAI 64
Query: 123 YTRFVALFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEM 182
+ R A + D+ +AV +L +G+S K L+ LA + T L+ + + E
Sbjct: 65 WGRLSAALDPFDH---EAVGRARTDRLGRLGLSAAKIKTLKHLAREITAERLNLDVLAEE 121
Query: 183 DDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKM 242
D L S+ GIG W+ ++++F L D P GDL V++G+++ GL+ P +M
Sbjct: 122 DADAAHHTLISLPGIGPWTADVYLLFCLGHGDAWPAGDLAVQEGIKIGLGLQARPTEKQM 181
Query: 243 EEVCEKWKPYRSVGSWYMWRLMEA----KGVLPNVAKAAVTSVEAA 284
+ E W+P R + W A +GVL A A + +V A
Sbjct: 182 VPLAEPWRPLRGAAAHLWWSYYRAVKKREGVLAGEANAVLNNVAVA 227
>gi|229148823|ref|ZP_04277071.1| DNA-3-methyladenine glycosylase II [Bacillus cereus m1550]
gi|228634617|gb|EEK91198.1| DNA-3-methyladenine glycosylase II [Bacillus cereus m1550]
Length = 291
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 99/190 (52%), Gaps = 9/190 (4%)
Query: 81 PLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNIL--- 137
PL T A+ P E F L + I++QQ+ K A + +FV + E N +
Sbjct: 106 PLFETY--AYTPIILEFDY--FACLLRCIIHQQINLKFATVLTEKFVKRYGTEKNGVFFF 161
Query: 138 --PDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVK 195
P+ V +S ++LRE S RKA Y+ L G L+ SI + + L ++
Sbjct: 162 PTPEIVANISIEELREQKFSQRKAEYIVGLGRSIVSGTLNLASIENGTEEDISAQLLPIR 221
Query: 196 GIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSV 255
GIGAW+V F++F L + ++ P D+G+++ +Q ++ L + P +E+V ++ +PY S
Sbjct: 222 GIGAWTVQNFLMFGLGRKNMFPKADIGIQRAVQGIFQLDDKPDDAFLEKVKQECEPYCSY 281
Query: 256 GSWYMWRLME 265
+ Y+W+ +E
Sbjct: 282 AALYLWKSIE 291
>gi|409080587|gb|EKM80947.1| hypothetical protein AGABI1DRAFT_71586 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 421
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 52/132 (39%), Positives = 81/132 (61%), Gaps = 17/132 (12%)
Query: 112 QQLAYKAAKSIYTRFVALFN-------GEDNIL---------PDAVLAVSPQQLREIGVS 155
QQ+++ AA+SI +F L++ G+D + P V A LR G+S
Sbjct: 138 QQISWLAARSIIHKFKRLYDPTLPEKPGDDPYVCFTINSFPTPSQVAATDISVLRSAGLS 197
Query: 156 YRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDV 215
RKA Y++DLA+++ DG LS + I+ +D + ML V+GIG+ ++MF +FSL +PD+
Sbjct: 198 TRKAEYIQDLAKRFADGRLSTKKILSANDDDLADMLIQVRGIGS-VLNMFAMFSLRRPDI 256
Query: 216 LPVGDLGVRKGL 227
LP+GDLGV++GL
Sbjct: 257 LPIGDLGVQRGL 268
Score = 44.7 bits (104), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 32/55 (58%), Gaps = 9/55 (16%)
Query: 213 PDVLPVGDLGVRKGLQVLYGLKELPGAL----KMEEVCEKWKPYRSVGSWYMWRL 263
P L + +L R + G K++ GAL +ME + E WKPYRS+G +YMW L
Sbjct: 368 PKTLSISELRSR-----ISGKKKVKGALLTPDEMEALTESWKPYRSIGVYYMWSL 417
>gi|219121055|ref|XP_002185759.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|209582608|gb|ACI65229.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 394
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 98/191 (51%), Gaps = 32/191 (16%)
Query: 102 FLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNILPDAVLAVSPQQLRE---------I 152
F SL + I Q ++ K+A++++ R L + ++ P +L + Q E +
Sbjct: 154 FESLCRIIAGQFVSGKSAQAVWKRL--LEHARHDLTPTRILQLVSQPQGEDIEFGLQKPV 211
Query: 153 GVSYRKASYLRDLAEKYTDGILSDESIVEMDD---------VTMFKMLTSVKGIGAWSVH 203
G++ KA + DLA + DG LS+ + ++ K L V+GIG WSV
Sbjct: 212 GLTKNKAKSIVDLARHFEDGRLSEGFLTSSTSPSGDTDSTITSIQKALLKVQGIGPWSVD 271
Query: 204 MFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVC------------EKWKP 251
MF++F L +P+VLP+GDLGVRKG+ + + ++ K ++C E + P
Sbjct: 272 MFLLFYLEQPNVLPLGDLGVRKGIAIHFAMRGSVKKGKQAQLCPKQDAPQIRRRLEAYAP 331
Query: 252 YRSVGSWYMWR 262
Y+S+ ++YMWR
Sbjct: 332 YQSLLTYYMWR 342
>gi|296501250|ref|YP_003662950.1| DNA-3-methyladenine glycosylase II [Bacillus thuringiensis BMB171]
gi|296322302|gb|ADH05230.1| DNA-3-methyladenine glycosylase II [Bacillus thuringiensis BMB171]
Length = 287
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 99/190 (52%), Gaps = 9/190 (4%)
Query: 81 PLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNIL--- 137
PL T A+ P E F L + I++QQ+ K A + +FV + E N +
Sbjct: 102 PLFETY--AYTPIILEFDY--FACLLRCIIHQQINLKFATVLTEQFVKRYGTEKNGVFFF 157
Query: 138 --PDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVK 195
P+ V +S ++LRE S RKA Y+ L G L+ SI + + L ++
Sbjct: 158 PTPEIVANISIEELREQKFSQRKAEYIVGLGRSIVSGTLNLASIENGTEEDISAQLLPIR 217
Query: 196 GIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSV 255
GIGAW+V F++F L + ++ P D+G+++ +Q ++ L + P +E+V ++ +PY S
Sbjct: 218 GIGAWTVQNFLMFGLGRKNMFPKADIGIQRAVQGIFQLDDKPDDAFLEKVKQECEPYCSY 277
Query: 256 GSWYMWRLME 265
+ Y+W+ +E
Sbjct: 278 AALYLWKSIE 287
>gi|15891352|ref|NP_357024.1| DNA-3-methyladenine glycosidase II [Agrobacterium fabrum str. C58]
gi|15159739|gb|AAK89809.1| DNA-3-methyladenine glycosidase II [Agrobacterium fabrum str. C58]
Length = 215
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 98/202 (48%), Gaps = 2/202 (0%)
Query: 60 FKPLTFKGEVDIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAA 119
K +T ++ L HL DP L+ +I+ P F LA ++ Q ++ +A
Sbjct: 1 MKIITGMDDISEGLDHLARLDPALSPVIEKAGPLELRIHEPGFAGLAHIVVSQMVSRASA 60
Query: 120 KSIYTRFVALFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESI 179
+I+ R +A G+ + + LAVS + G+S KA+ L LA T+G + + +
Sbjct: 61 NAIWARILAGTGGK--VTAENYLAVSEELRATFGLSRAKATTLEGLARAVTEGQVDLDGV 118
Query: 180 VEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGA 239
V + F L +++GIG W+ ++++F PD+ PVGD+ +R + L+ P A
Sbjct: 119 VRKEAGAAFSELVALRGIGPWTAEVYLMFCGGHPDIFPVGDVALRSAVAHALDLEVRPDA 178
Query: 240 LKMEEVCEKWKPYRSVGSWYMW 261
+ E W P+RSV + W
Sbjct: 179 KWLAERATLWSPWRSVAARLFW 200
>gi|206974371|ref|ZP_03235288.1| endonuclease III domain protein [Bacillus cereus H3081.97]
gi|217958022|ref|YP_002336566.1| endonuclease III domain-containing protein [Bacillus cereus AH187]
gi|375282558|ref|YP_005102995.1| DNA-3-methyladenine glycosidase [Bacillus cereus NC7401]
gi|423356687|ref|ZP_17334289.1| hypothetical protein IAU_04738 [Bacillus cereus IS075]
gi|423375583|ref|ZP_17352919.1| hypothetical protein IC5_04635 [Bacillus cereus AND1407]
gi|423571398|ref|ZP_17547640.1| hypothetical protein II7_04616 [Bacillus cereus MSX-A12]
gi|206747611|gb|EDZ59001.1| endonuclease III domain protein [Bacillus cereus H3081.97]
gi|217066807|gb|ACJ81057.1| endonuclease III domain protein [Bacillus cereus AH187]
gi|358351083|dbj|BAL16255.1| DNA-3-methyladenine glycosidase [Bacillus cereus NC7401]
gi|401077274|gb|EJP85614.1| hypothetical protein IAU_04738 [Bacillus cereus IS075]
gi|401091847|gb|EJP99986.1| hypothetical protein IC5_04635 [Bacillus cereus AND1407]
gi|401200768|gb|EJR07647.1| hypothetical protein II7_04616 [Bacillus cereus MSX-A12]
Length = 287
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 93/169 (55%), Gaps = 5/169 (2%)
Query: 102 FLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNIL-----PDAVLAVSPQQLREIGVSY 156
F L + I++QQ+ K A ++ +FV + E N + P+ V +S ++LRE S
Sbjct: 119 FACLLRCIIHQQINLKFATALTEQFVKRYGAEKNGVFFFPTPEIVANISIEELREQKFSQ 178
Query: 157 RKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVL 216
RKA Y+ L G L+ SI + + L ++GIG W+V F++F L + ++
Sbjct: 179 RKAEYIVGLGRSIASGTLNLASIETKAEEEVSAQLLPIRGIGTWTVQNFLMFGLGRKNMF 238
Query: 217 PVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSWYMWRLME 265
P D+G+++ +Q ++ L++ P +E+V ++ +PY S + Y+W+ +E
Sbjct: 239 PKADIGIQRAVQGVFQLEDKPDDAFLEKVKQECEPYCSYAALYLWKSIE 287
>gi|149914715|ref|ZP_01903245.1| DNA-3-methyladenine glycosylase II, putative [Roseobacter sp.
AzwK-3b]
gi|149811508|gb|EDM71343.1| DNA-3-methyladenine glycosylase II, putative [Roseobacter sp.
AzwK-3b]
Length = 209
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 94/194 (48%), Gaps = 8/194 (4%)
Query: 68 EVDIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFV 127
+V+ HLR P +A D P + F L +I+ QQ++ AA +I++R
Sbjct: 11 DVEEGATHLRAACPRMAHAHDLTAPLPLRRRQDGFEQLLNAIVSQQVSVAAADAIWSRM- 69
Query: 128 ALFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTM 187
G P +L S LR G+S +K Y R LA D ++ E +
Sbjct: 70 ---KGAKLTGPRKILWASDDDLRAAGLSRQKIRYARALAGARIDYRALRDAPTEQ----V 122
Query: 188 FKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCE 247
+ LT V GIG W+ ++ +FSL + DV GDL +++G ++LY L E P + + E
Sbjct: 123 IETLTEVPGIGVWTAEIYAMFSLGRADVFAPGDLALQEGARLLYDLPERPNERALRAMSE 182
Query: 248 KWKPYRSVGSWYMW 261
W+P+RSV + +W
Sbjct: 183 AWRPWRSVAARILW 196
>gi|374315392|ref|YP_005061820.1| 3-methyladenine DNA glycosylase [Sphaerochaeta pleomorpha str.
Grapes]
gi|359351036|gb|AEV28810.1| 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase
[Sphaerochaeta pleomorpha str. Grapes]
Length = 209
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 104/193 (53%), Gaps = 3/193 (1%)
Query: 73 LRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNG 132
+++L +KDP+LA I+ ++ +S + ++ Q L+ K A+ I RF L N
Sbjct: 11 IQYLCNKDPILAKGIERVGKLSYTTSEEGLTFVVGLVISQMLSSKVAEVIEKRFQLLCNY 70
Query: 133 EDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLT 192
N+ + + ++ Q+R IG+S RKA ++D+A + + + D + LT
Sbjct: 71 --NLTTETISSLEIAQMRSIGLSNRKAQTIKDVALYCQEHPSFFKELATCLDKEVISRLT 128
Query: 193 SVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPY 252
S+KGIG W+ M++IF+L + DVLP D + + LY ++L + + + C W PY
Sbjct: 129 SLKGIGPWTAKMYLIFALDRMDVLPYEDGAFLQAYRYLYKTEDLSIS-SITQRCAVWHPY 187
Query: 253 RSVGSWYMWRLME 265
SV S Y++R+++
Sbjct: 188 ASVASRYLYRMLD 200
>gi|229143211|ref|ZP_04271643.1| DNA-3-methyladenine glycosylase II [Bacillus cereus BDRD-ST24]
gi|228640292|gb|EEK96690.1| DNA-3-methyladenine glycosylase II [Bacillus cereus BDRD-ST24]
Length = 291
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 99/190 (52%), Gaps = 9/190 (4%)
Query: 81 PLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNIL--- 137
PL T A+ P E F L + I++QQ+ K A + +FV + E N +
Sbjct: 106 PLFETY--AYTPIILEFDY--FACLLRCIIHQQINLKFATVLTEQFVKRYGTEKNGVFFF 161
Query: 138 --PDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVK 195
P+ V +S ++LRE S RKA Y+ L G L+ SI + + L ++
Sbjct: 162 PTPEIVANISIEELREQKFSQRKAEYIVGLGRSIVSGTLNLASIENGTEEDISAQLLPIR 221
Query: 196 GIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSV 255
GIGAW+V F++F L + ++ P D+G+++ +Q ++ L + P +E+V ++ +PY S
Sbjct: 222 GIGAWTVQNFLMFGLGRKNMFPKADIGIQRAVQGIFQLDDKPDDAFLEKVKQECEPYCSY 281
Query: 256 GSWYMWRLME 265
+ Y+W+ +E
Sbjct: 282 AALYLWKSIE 291
>gi|421132007|ref|ZP_15592181.1| base excision DNA repair protein, HhH-GPD family [Leptospira
kirschneri str. 2008720114]
gi|410356559|gb|EKP03876.1| base excision DNA repair protein, HhH-GPD family [Leptospira
kirschneri str. 2008720114]
Length = 213
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 99/186 (53%), Gaps = 3/186 (1%)
Query: 76 LRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDN 135
L KD L +++ + P F S + F +L IL QQ++ +AK+ V L N +
Sbjct: 20 LCQKDQDLHSILLKYGYPPFWSRKPNFETLVHIILEQQVSLASAKA---ALVKLKNKIGS 76
Query: 136 ILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVK 195
+ +L +S +LRE S +K Y+RDLAE L +++ D + K L +VK
Sbjct: 77 VTAPKILLLSDIELRECYFSRQKTGYVRDLAEFVFSKRLILGNLISKSDQKIRKDLIAVK 136
Query: 196 GIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSV 255
GIG W+V +F+I +LH+ D+ P+GDL + L+ + L ++ + + WKP+RS+
Sbjct: 137 GIGNWTVDIFLIMALHRADIFPLGDLAAVQSLKKIKNLSADTSRDQILFLSKSWKPFRSI 196
Query: 256 GSWYMW 261
+ +W
Sbjct: 197 ATMLLW 202
>gi|229125918|ref|ZP_04254943.1| DNA-3-methyladenine glycosylase II [Bacillus cereus BDRD-Cer4]
gi|228657576|gb|EEL13389.1| DNA-3-methyladenine glycosylase II [Bacillus cereus BDRD-Cer4]
Length = 291
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 99/190 (52%), Gaps = 9/190 (4%)
Query: 81 PLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNIL--- 137
PL T A+ P E F L + I++QQ+ K A + +FV + E N +
Sbjct: 106 PLFETY--AYTPIILEFDY--FACLLRCIIHQQINLKFATVLTEQFVKRYGTEKNGVFFF 161
Query: 138 --PDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVK 195
P+ V +S ++LRE S RKA Y+ L G L+ SI + + L ++
Sbjct: 162 PTPEIVANISIEELREQKFSQRKAEYIVGLGRSIVSGTLNLASIENGTEEDISAQLLPIR 221
Query: 196 GIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSV 255
GIGAW+V F++F L + ++ P D+G+++ +Q ++ L + P +E+V ++ +PY S
Sbjct: 222 GIGAWTVQNFLMFGLGRKNMFPKADIGIQRAVQGIFQLDDKPDDAFLEKVKQECEPYCSY 281
Query: 256 GSWYMWRLME 265
+ Y+W+ +E
Sbjct: 282 AALYLWKSIE 291
>gi|229137288|ref|ZP_04265904.1| DNA-3-methyladenine glycosylase II [Bacillus cereus BDRD-ST26]
gi|228646191|gb|EEL02409.1| DNA-3-methyladenine glycosylase II [Bacillus cereus BDRD-ST26]
Length = 291
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 93/169 (55%), Gaps = 5/169 (2%)
Query: 102 FLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNIL-----PDAVLAVSPQQLREIGVSY 156
F L + I++QQ+ K A ++ +FV + E N + P+ V +S ++LRE S
Sbjct: 123 FACLLRCIIHQQINLKFATALTEQFVKRYGAEKNGVFFFPTPEIVANISIEELREQKFSQ 182
Query: 157 RKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVL 216
RKA Y+ L G L+ SI + + L ++GIG W+V F++F L + ++
Sbjct: 183 RKAEYIVGLGRSIASGTLNLASIETKAEEEVSAQLLPIRGIGTWTVQNFLMFGLGRKNMF 242
Query: 217 PVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSWYMWRLME 265
P D+G+++ +Q ++ L++ P +E+V ++ +PY S + Y+W+ +E
Sbjct: 243 PKADIGIQRAVQGVFQLEDKPDDAFLEKVKQECEPYCSYAALYLWKSIE 291
>gi|423638470|ref|ZP_17614122.1| hypothetical protein IK7_04878 [Bacillus cereus VD156]
gi|401270786|gb|EJR76805.1| hypothetical protein IK7_04878 [Bacillus cereus VD156]
Length = 287
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 99/190 (52%), Gaps = 9/190 (4%)
Query: 81 PLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNIL--- 137
PL T A+ P E F L + I++QQ+ K A + +FV + E N +
Sbjct: 102 PLFETY--AYTPIILEFDY--FACLLRCIIHQQINLKFATVLTEQFVKRYGTEKNGVFFF 157
Query: 138 --PDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVK 195
P+ V +S ++LRE S RKA Y+ L G L+ SI + + L ++
Sbjct: 158 PTPEIVANISIEELREQKFSQRKAEYIVGLGRSIVSGTLNLASIENGTEEEVSAQLLPIR 217
Query: 196 GIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSV 255
GIGAW+V F++F L + ++ P D+G+++ +Q ++ L + P +E+V ++ +PY S
Sbjct: 218 GIGAWTVQNFLMFGLGRKNMFPKADIGIQRAVQGIFQLDDKPDDAFLEKVKQECEPYCSY 277
Query: 256 GSWYMWRLME 265
+ Y+W+ +E
Sbjct: 278 AALYLWKSIE 287
>gi|218232083|ref|YP_002365268.1| endonuclease III domain protein [Bacillus cereus B4264]
gi|218160040|gb|ACK60032.1| endonuclease III domain protein [Bacillus cereus B4264]
Length = 287
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 99/190 (52%), Gaps = 9/190 (4%)
Query: 81 PLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNIL--- 137
PL T A+ P E F L + I++QQ+ K A + +FV + E N +
Sbjct: 102 PLFETY--AYTPIILEFDY--FACLLRCIIHQQINLKFATVLTEQFVKRYGTEKNGVFFF 157
Query: 138 --PDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVK 195
P+ V +S ++LRE S RKA Y+ L G L+ SI + + L ++
Sbjct: 158 PTPEIVANISIEELREQKFSQRKAEYIVGLGRSIVSGTLNLASIENGTEEDISAQLLPIR 217
Query: 196 GIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSV 255
GIGAW+V F++F L + ++ P D+G+++ +Q ++ L + P +E+V ++ +PY S
Sbjct: 218 GIGAWTVQNFLMFGLGRKNMFPKADIGIQRAVQGIFQLDDKPDDAFLEKVKQECEPYCSY 277
Query: 256 GSWYMWRLME 265
+ Y+W+ +E
Sbjct: 278 AALYLWKSIE 287
>gi|30018676|ref|NP_830307.1| DNA-3-methyladenine glycosylase II [Bacillus cereus ATCC 14579]
gi|423590244|ref|ZP_17566308.1| hypothetical protein IIE_05633 [Bacillus cereus VD045]
gi|423644769|ref|ZP_17620385.1| hypothetical protein IK9_04712 [Bacillus cereus VD166]
gi|29894217|gb|AAP07508.1| DNA-3-methyladenine glycosylase II [Bacillus cereus ATCC 14579]
gi|401221066|gb|EJR27692.1| hypothetical protein IIE_05633 [Bacillus cereus VD045]
gi|401269385|gb|EJR75418.1| hypothetical protein IK9_04712 [Bacillus cereus VD166]
Length = 287
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 99/190 (52%), Gaps = 9/190 (4%)
Query: 81 PLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNIL--- 137
PL T A+ P E F L + I++QQ+ K A + +FV + E N +
Sbjct: 102 PLFETY--AYTPIILEFDY--FACLLRCIIHQQINLKFATVLTEQFVKRYGTEKNGVFFF 157
Query: 138 --PDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVK 195
P+ V +S ++LRE S RKA Y+ L G L+ SI + + L ++
Sbjct: 158 PTPEIVANISIEELREQKFSQRKAEYIVGLGRSIVSGTLNLASIENGTEEDISAQLLPIR 217
Query: 196 GIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSV 255
GIGAW+V F++F L + ++ P D+G+++ +Q ++ L + P +E+V ++ +PY S
Sbjct: 218 GIGAWTVQNFLMFGLGRKNMFPKADIGIQRAVQGIFQLDDKPDDAFLEKVKQECEPYCSY 277
Query: 256 GSWYMWRLME 265
+ Y+W+ +E
Sbjct: 278 AALYLWKSIE 287
>gi|423653366|ref|ZP_17628665.1| hypothetical protein IKG_00354 [Bacillus cereus VD200]
gi|401301530|gb|EJS07118.1| hypothetical protein IKG_00354 [Bacillus cereus VD200]
Length = 287
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 99/190 (52%), Gaps = 9/190 (4%)
Query: 81 PLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNIL--- 137
PL T A+ P E F L + I++QQ+ K A + +FV + E N +
Sbjct: 102 PLFETY--AYTPIILEFDY--FACLLRCIIHQQINLKFATVLTEQFVKRYGTEKNGVFFF 157
Query: 138 --PDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVK 195
P+ V +S ++LRE S RKA Y+ L G L+ SI + + L ++
Sbjct: 158 PTPEIVANISIEELREQKFSQRKAEYIVGLGRSIVSGTLNLASIENGTEEDISAQLLPIR 217
Query: 196 GIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSV 255
GIGAW+V F++F L + ++ P D+G+++ +Q ++ L + P +E+V ++ +PY S
Sbjct: 218 GIGAWTVQNFLMFGLGRKNMFPKADIGIQRAVQGIFQLDDKPDDAFLEKVKQECEPYCSY 277
Query: 256 GSWYMWRLME 265
+ Y+W+ +E
Sbjct: 278 AALYLWKSIE 287
>gi|418729056|ref|ZP_13287618.1| base excision DNA repair protein, HhH-GPD family [Leptospira
interrogans str. UI 12758]
gi|410776074|gb|EKR56060.1| base excision DNA repair protein, HhH-GPD family [Leptospira
interrogans str. UI 12758]
Length = 213
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 63/192 (32%), Positives = 102/192 (53%), Gaps = 13/192 (6%)
Query: 75 HLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGED 134
L KD L +++ H P F S + F +L IL QQ++ +A++ V L N
Sbjct: 19 QLSRKDRGLHSILLKHGYPPFWSRKPNFETLVHIILEQQVSLASARAA---LVKLKNKIG 75
Query: 135 NILPDAVLAVSPQQLREIGVSYRKASYLRDLAE-----KYTDGILSDESIVEMDDVTMFK 189
++ +L +S +LR+ S +K SY+RDLAE + G LS +S D + +
Sbjct: 76 SVTARKILLLSDIELRKCYFSRQKTSYVRDLAEFVFSKRIILGDLSSKS-----DQMIRE 130
Query: 190 MLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKW 249
L +VKGIG W+V +F+I +LH+ D+ P+GDL K L+ + L K+ V + W
Sbjct: 131 DLITVKGIGNWTVDIFLIMALHRADIFPLGDLAAVKSLKKIKKLPVDTSNDKILSVSKSW 190
Query: 250 KPYRSVGSWYMW 261
+P+RS+ + +W
Sbjct: 191 RPFRSIATMLLW 202
>gi|152974245|ref|YP_001373762.1| DNA-3-methyladenine glycosylase II [Bacillus cytotoxicus NVH
391-98]
gi|152022997|gb|ABS20767.1| DNA-3-methyladenine glycosylase II [Bacillus cytotoxicus NVH
391-98]
Length = 287
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 94/169 (55%), Gaps = 5/169 (2%)
Query: 102 FLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNIL-----PDAVLAVSPQQLREIGVSY 156
F L + I++QQ+ K A + +FV + E N + P+ V +S ++LR S
Sbjct: 119 FACLLRCIIHQQVNLKFATVLTEQFVKTYGTEKNDVFFFPTPERVAKISIEELRGQKFSQ 178
Query: 157 RKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVL 216
RKA Y+ LA++ +G L+ + + + + L V+GIGAW+V F++F L + ++
Sbjct: 179 RKAEYMIGLAKQIVEGKLNLSKLEKQTEEEISAQLLPVRGIGAWTVQNFLLFGLGRRNMF 238
Query: 217 PVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSWYMWRLME 265
P D+G+++ LQ L+ L P +E++ ++ +PY S + Y+W+ +E
Sbjct: 239 PKTDIGIQRALQRLFQLDNKPDDALLEQIKQECEPYCSYAALYLWKSIE 287
>gi|310816114|ref|YP_003964078.1| DNA-3-methyladenine glycosylase II [Ketogulonicigenium vulgare Y25]
gi|308754849|gb|ADO42778.1| DNA-3-methyladenine glycosylase II, putative [Ketogulonicigenium
vulgare Y25]
Length = 213
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 96/194 (49%), Gaps = 9/194 (4%)
Query: 76 LRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDN 135
L ++P A + P F L +I+ QQ++ +A++I+ R G
Sbjct: 24 LAQREPRFAHALTIIGPLELRRDVEGFPRLLSAIVSQQVSTASARAIWARV----EGAGL 79
Query: 136 ILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVK 195
LP ++LA + ++R +G+S K Y R LA D E++ + D + L +V
Sbjct: 80 HLPQSILAATDDEMRAVGLSRPKVKYARALAASGIDF----EALPHLTDTEVIDRLVAVS 135
Query: 196 GIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSV 255
GIG W+ ++ +FSL + DVLP DL +++ + L+GL+ P + W+P+RSV
Sbjct: 136 GIGRWTAEIYAMFSLGRVDVLPAADLALQEAARDLFGLESRPTEKAFRALAAPWQPWRSV 195
Query: 256 GSWYMWRLM-EAKG 268
S +WR E KG
Sbjct: 196 ASTLLWRWYREVKG 209
>gi|229108091|ref|ZP_04237716.1| DNA-3-methyladenine glycosylase II [Bacillus cereus Rock1-15]
gi|228675366|gb|EEL30585.1| DNA-3-methyladenine glycosylase II [Bacillus cereus Rock1-15]
Length = 291
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 99/190 (52%), Gaps = 9/190 (4%)
Query: 81 PLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNIL--- 137
PL T A+ P E F L + I++QQ+ K A + +FV + E N +
Sbjct: 106 PLFETY--AYTPIILEFDY--FACLLRCIIHQQINLKFATVLTEQFVKRYGTEKNGVFFF 161
Query: 138 --PDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVK 195
P+ V +S ++LRE S RKA Y+ L G L+ SI + + L ++
Sbjct: 162 PTPEIVANISIEELREQKFSQRKAEYIVGLGRSIVSGTLNLASIENGTEEDISAQLLPIR 221
Query: 196 GIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSV 255
GIGAW+V F++F L + ++ P D+G+++ +Q ++ L + P +E+V ++ +PY S
Sbjct: 222 GIGAWTVQNFLMFGLGRKNMFPKADIGIQRAVQGIFQLDDKPDDAFLEKVKQECEPYCSY 281
Query: 256 GSWYMWRLME 265
+ Y+W+ +E
Sbjct: 282 AALYLWKSIE 291
>gi|228919349|ref|ZP_04082718.1| DNA-3-methyladenine glycosylase II [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|228840285|gb|EEM85557.1| DNA-3-methyladenine glycosylase II [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
Length = 291
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 99/190 (52%), Gaps = 9/190 (4%)
Query: 81 PLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNIL--- 137
PL T A+ P E F L + I++QQ+ K A + +FV + E N +
Sbjct: 106 PLFETY--AYTPIILEFDY--FACLLRCIIHQQINLKFATVLTEQFVKRYGTEKNGVFFF 161
Query: 138 --PDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVK 195
P+ V +S ++LRE S RKA Y+ L G L+ SI + + L ++
Sbjct: 162 PTPEIVANISIEELREQKFSQRKAEYIVGLGRSIVSGTLNLASIENGTEEEVSAQLLPIR 221
Query: 196 GIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSV 255
GIGAW+V F++F L + ++ P D+G+++ +Q ++ L + P +E+V ++ +PY S
Sbjct: 222 GIGAWTVQNFLMFGLGRKNMFPKADIGIQRAVQGIFQLDDKPDDAFLEKVKQECEPYCSY 281
Query: 256 GSWYMWRLME 265
+ Y+W+ +E
Sbjct: 282 AALYLWKSIE 291
>gi|85373171|ref|YP_457233.1| DNA-3-methyladenine DNA glycosylase [Erythrobacter litoralis
HTCC2594]
gi|84786254|gb|ABC62436.1| putative DNA-3-methyladenine glycosidase ii protein [Erythrobacter
litoralis HTCC2594]
Length = 205
Score = 94.0 bits (232), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 100/194 (51%), Gaps = 3/194 (1%)
Query: 68 EVDIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFV 127
++ L + ++P + ++ P + + +L ++I+ QQ++ A S++ +
Sbjct: 7 QIKDGLDEIASREPRIGAVLKVAGYPEPRLRPTGYKTLLRTIVGQQVSVAVATSMWNKLE 66
Query: 128 ALFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTM 187
A GED P +L LR G+S +K Y R L E G L E++ + D+ +
Sbjct: 67 AEL-GED-FTPACLLERDFDALRACGLSRQKQGYARSLCELVEAGALDFENLPKEDEAAI 124
Query: 188 FKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCE 247
+ LT +KGIG WS ++++F+ +PD+ P GDL V+K + + G E+P ++ + E
Sbjct: 125 -EELTRIKGIGRWSAEIYLLFAEGRPDIWPAGDLAVQKAVGRIMGHAEMPKEKEVRAIAE 183
Query: 248 KWKPYRSVGSWYMW 261
W+P+R + + W
Sbjct: 184 DWRPHRGAVAIFAW 197
>gi|114799381|ref|YP_762066.1| putative DNA-3-methyladenine glycosylase [Hyphomonas neptunium ATCC
15444]
gi|114739555|gb|ABI77680.1| putative DNA-3-methyladenine glycosylase [Hyphomonas neptunium ATCC
15444]
Length = 213
Score = 94.0 bits (232), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 103/205 (50%), Gaps = 3/205 (1%)
Query: 72 ALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFN 131
A L DP LA D+ P + +S + L + I +QQL+ KAA +I+ R V +F
Sbjct: 12 ACERLALADPALARAYDSLGVPEWRTSEPGYNMLGRMISHQQLSTKAAATIWGR-VEVFL 70
Query: 132 GEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKML 191
GE + P+ +LA P LR G+S K ++L +AE G L+ + D + L
Sbjct: 71 GE--VTPETLLAADPDALRACGLSRPKVAHLTSIAEAMVTGELNLARVCAADLDSARAEL 128
Query: 192 TSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKP 251
SV+GIG W+ +F+++++ D P+ D+G+ + + L + + + E W+P
Sbjct: 129 VSVRGIGPWTAELFLLYAVGAMDAFPIADVGLMEAHKQLGRYETRMESKIFTQHAEIWRP 188
Query: 252 YRSVGSWYMWRLMEAKGVLPNVAKA 276
+R V + +W + A+ + KA
Sbjct: 189 HRGVAAHLLWGWLNAERARDSAPKA 213
>gi|85703434|ref|ZP_01034538.1| DNA-3-methyladenine glycosylase II, putative [Roseovarius sp. 217]
gi|85672362|gb|EAQ27219.1| DNA-3-methyladenine glycosylase II, putative [Roseovarius sp. 217]
Length = 209
Score = 94.0 bits (232), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 86/161 (53%), Gaps = 10/161 (6%)
Query: 102 FLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNILPDAVLAVSPQQLREIGVSYRKASY 161
F L +I+ QQ++ +A +I++R G P+ ++AVS LR +G+S +KA Y
Sbjct: 45 FAQLLSAIVSQQVSVASANAIWSRL----EGAGFTEPERIVAVSDDDLRAVGLSRQKARY 100
Query: 162 LRDLAEKYTD-GILSDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGD 220
R LAE D L E ++ LT V GIG W+ ++ +FSL + DV GD
Sbjct: 101 ARALAEARIDYPALRTEPTQDV-----IATLTQVPGIGVWTAEIYAMFSLGRADVFAPGD 155
Query: 221 LGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSWYMW 261
L +++ ++LY L E P + ++ E W P+RSV + +W
Sbjct: 156 LALQEAARLLYDLPERPKERALRQMAEAWSPWRSVAARLLW 196
>gi|384215183|ref|YP_005606349.1| DNA-3-methyladenine glycosidase II [Bradyrhizobium japonicum USDA
6]
gi|354954082|dbj|BAL06761.1| DNA-3-methyladenine glycosidase II [Bradyrhizobium japonicum USDA
6]
Length = 217
Score = 94.0 bits (232), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 107/214 (50%), Gaps = 7/214 (3%)
Query: 63 LTFKGEVDIALRHLRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSI 122
L + +++ A+ L +DP L +++ P F LA + QQL+ +A +I
Sbjct: 5 LETQSDLEEAVHALIKRDPRLKPVLEIAGMPALRRREPGFTGLAHIVCGQQLSTASAAAI 64
Query: 123 YTRFVALFNGEDNILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEM 182
+ R A F+ D+ DAV +L +G+S K L+ LA + + L+ + + E
Sbjct: 65 WGRLSAAFDPFDH---DAVRRARTDRLGRLGLSAAKIKTLKHLAREISAQRLNLDVLAEE 121
Query: 183 DDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKM 242
D L ++ GIG W+ ++++F L D P GD+ V++G++V GLK P +M
Sbjct: 122 DAEAAHHTLITLPGIGPWTADVYLLFCLGHGDAWPAGDIAVQEGIKVGLGLKARPTEKQM 181
Query: 243 EEVCEKWKPYRSVGS---WYMWRLMEAK-GVLPN 272
+ E W+P R + W +R+++ + GV+ N
Sbjct: 182 APLAEPWRPLRGAAAHLWWSYYRVIKKREGVIGN 215
>gi|228956902|ref|ZP_04118683.1| DNA-3-methyladenine glycosylase II [Bacillus thuringiensis serovar
pakistani str. T13001]
gi|228802745|gb|EEM49581.1| DNA-3-methyladenine glycosylase II [Bacillus thuringiensis serovar
pakistani str. T13001]
Length = 291
Score = 94.0 bits (232), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 99/190 (52%), Gaps = 9/190 (4%)
Query: 81 PLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNIL--- 137
PL T A+ P E F L + I++QQ+ K A + +FV + E N +
Sbjct: 106 PLFETY--AYTPIILEFDY--FACLLRCIIHQQINLKFATVLTEQFVKRYGTEKNGVFFF 161
Query: 138 --PDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVK 195
P+ V +S ++LRE S RKA Y+ L G L+ SI + + L ++
Sbjct: 162 PTPEIVANISIEELREQKFSQRKAEYIVGLGRSIVSGTLNLASIENGTEEDISAQLLPIR 221
Query: 196 GIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSV 255
GIGAW+V F++F L + ++ P D+G+++ +Q ++ L + P +E+V ++ +PY S
Sbjct: 222 GIGAWTVQNFLMFGLGRKNMFPKADIGIQRAVQGIFRLDDKPDDAFLEKVKQECEPYCSY 281
Query: 256 GSWYMWRLME 265
+ Y+W+ +E
Sbjct: 282 AALYLWKSIE 291
>gi|423632396|ref|ZP_17608142.1| hypothetical protein IK5_05245 [Bacillus cereus VD154]
gi|401261274|gb|EJR67436.1| hypothetical protein IK5_05245 [Bacillus cereus VD154]
Length = 287
Score = 94.0 bits (232), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 99/190 (52%), Gaps = 9/190 (4%)
Query: 81 PLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNIL--- 137
PL T A+ P E F L + I++QQ+ K A + +FV + E N +
Sbjct: 102 PLFETY--AYTPIILEFDY--FACLLRCIIHQQINLKFATVLTEQFVKRYGTEKNGVFFF 157
Query: 138 --PDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVK 195
P+ V +S ++LRE S RKA Y+ L G L+ SI + + L ++
Sbjct: 158 PTPEIVANISIEELREQKFSQRKAEYIVGLGRSIVSGTLNLASIENGTEEDISAQLLPIR 217
Query: 196 GIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSV 255
GIGAW+V F++F L + ++ P D+G+++ +Q ++ L + P +E+V ++ +PY S
Sbjct: 218 GIGAWTVQNFLMFGLGRKNMFPKADIGIQRAVQGIFRLDDKPDDAFLEKVKQECEPYCSY 277
Query: 256 GSWYMWRLME 265
+ Y+W+ +E
Sbjct: 278 AALYLWKSIE 287
>gi|103486334|ref|YP_615895.1| HhH-GPD [Sphingopyxis alaskensis RB2256]
gi|98976411|gb|ABF52562.1| HhH-GPD [Sphingopyxis alaskensis RB2256]
Length = 205
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 88/161 (54%), Gaps = 5/161 (3%)
Query: 102 FLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNILPDAVLAVSP-QQLREIGVSYRKAS 160
+ +L ++I+ QQ++ AA SI+ + A F P V+A + LR G+S +K
Sbjct: 41 YTTLLRTIVGQQVSVAAATSIWNKLEAQFGAG---CPAEVIAAADFDTLRACGLSGQKQG 97
Query: 161 YLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGD 220
Y + LA+ DG L+ +++ DD +LT VKGIG WS ++++F+ +PD+ P GD
Sbjct: 98 YAKSLAQLILDGELTFDAL-PADDEEAIALLTRVKGIGRWSAEIYLLFAEGRPDIWPAGD 156
Query: 221 LGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSWYMW 261
L V++ + + L P + E+ E W+P+R + + W
Sbjct: 157 LAVQEAVGRILQLGARPSEKQARELAEAWRPHRGAAAIFSW 197
>gi|373954887|ref|ZP_09614847.1| HhH-GPD family protein [Mucilaginibacter paludis DSM 18603]
gi|373891487|gb|EHQ27384.1| HhH-GPD family protein [Mucilaginibacter paludis DSM 18603]
Length = 207
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 99/190 (52%), Gaps = 8/190 (4%)
Query: 76 LRDKDPLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDN 135
L +D L +I + P F S + F SL IL QQ++ +A + + L
Sbjct: 17 LAAQDADLYAIIRQYGYPPFWSRPNTFESLVHIILEQQVSLASALATLNK---LKEKIQE 73
Query: 136 ILPDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVK 195
I P V+ ++ ++L+ S +K Y+R LAE +G LS E + M D + + LTS+K
Sbjct: 74 ITPARVMLLTDEELKACYFSRQKTVYIRHLAENILNGNLSLEELELMPDEHIRQKLTSIK 133
Query: 196 GIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKME--EVCEKWKPYR 253
GIG W+V +++IF +H DV P+GDL L+ +K +P A + E + +WKP +
Sbjct: 134 GIGNWTVDIYLIFIVHHGDVFPIGDLAAVNALK---KVKNIPLATREEVLAIARQWKPNQ 190
Query: 254 SVGSWYMWRL 263
++ + +W
Sbjct: 191 TIATMLLWHF 200
>gi|229171270|ref|ZP_04298860.1| DNA-3-methyladenine glycosylase II [Bacillus cereus MM3]
gi|228612227|gb|EEK69459.1| DNA-3-methyladenine glycosylase II [Bacillus cereus MM3]
Length = 291
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 98/190 (51%), Gaps = 9/190 (4%)
Query: 81 PLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNIL--- 137
PL T A+ P E F L + I++QQ+ K A + +FV + E N +
Sbjct: 106 PLFETY--AYTPIILEFDY--FACLLRCIIHQQINLKFATVLTEQFVKRYGTEKNGVFFF 161
Query: 138 --PDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVK 195
P+ V +S ++LRE S RKA Y+ L G L+ SI D + L ++
Sbjct: 162 PTPEIVANISIEELREQKFSQRKAEYIVGLGRSIVSGTLNLASIETRTDEEVSAQLLPIR 221
Query: 196 GIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSV 255
GIG W+V F++F L + ++ P D+G+++ +Q ++ L + P +E+V ++ +PY S
Sbjct: 222 GIGTWTVQNFLMFGLGRKNMFPKADIGIQRAVQGVFQLDDKPDDAFLEKVKQECEPYCSY 281
Query: 256 GSWYMWRLME 265
+ Y+W+ +E
Sbjct: 282 AALYLWKSIE 291
>gi|357037182|ref|ZP_09098982.1| HhH-GPD family protein [Desulfotomaculum gibsoniae DSM 7213]
gi|355361347|gb|EHG09102.1| HhH-GPD family protein [Desulfotomaculum gibsoniae DSM 7213]
Length = 205
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 96/162 (59%), Gaps = 4/162 (2%)
Query: 102 FLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNILPDAVLAVSPQQLREIGVSYRKASY 161
F +L +I+ Q ++ +AK+++ R GE I P+ + +P +R+ G++ +KA
Sbjct: 45 FAALVYAIIGQLVSVHSAKTVWERIQESI-GE--ITPENLSGFTPDDVRQCGMTMKKAVC 101
Query: 162 LRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVLPVGDL 221
+ DL+++ G L ++ E+ D + + LT+++GIG W+ M +I + +PD++ D+
Sbjct: 102 ICDLSKEIVQGNLCLNNLRELPDSEIIRHLTAIRGIGRWTAEMLLINCMERPDIVSWEDI 161
Query: 222 GVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSWYMWRL 263
+R+G++ LYG+ +L + E +++ PY SV S Y+W+L
Sbjct: 162 AIRRGMEKLYGIPKLTKK-QFESYKKRYSPYGSVASIYLWKL 202
>gi|47567251|ref|ZP_00237965.1| DNA-3-methyladenine glycosylase II [Bacillus cereus G9241]
gi|47556094|gb|EAL14431.1| DNA-3-methyladenine glycosylase II [Bacillus cereus G9241]
Length = 287
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 92/169 (54%), Gaps = 5/169 (2%)
Query: 102 FLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNIL-----PDAVLAVSPQQLREIGVSY 156
F L + I++QQ+ K A + +FV + E N + P+ V +S ++LRE S
Sbjct: 119 FACLLRCIIHQQINLKFATVLTEQFVKRYGTEKNGVFFFPTPERVANISIEELREQKFSQ 178
Query: 157 RKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSLHKPDVL 216
RKA Y+ L GIL+ SI + + L ++GIG W+V F++F L + ++
Sbjct: 179 RKAEYIVGLGRSIASGILNLASIETKAEEEVSAQLLPIRGIGTWTVQNFLMFGLGRKNMF 238
Query: 217 PVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSWYMWRLME 265
P D+G+++ +Q ++ L + P +E+V ++ +PY S + Y+W+ +E
Sbjct: 239 PKADIGIQRAVQGVFQLDDKPDDAFLEKVKQECEPYCSYAALYLWKSIE 287
>gi|381203245|ref|ZP_09910353.1| DNA-3-methyladenine glycosylase II [Sphingobium yanoikuyae XLDN2-5]
Length = 209
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 86/171 (50%), Gaps = 10/171 (5%)
Query: 91 RPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNILPDAVLAVSPQQLR 150
R P +E+ L ++I+ QQ++ +A +++ + A P+A+LA LR
Sbjct: 37 REPGYET-------LLRTIVGQQVSVASAAAVWRKLEAELG--VGCTPEALLARDFDTLR 87
Query: 151 EIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSL 210
G+S +K Y R LAE DG L D + DD L +KGIG WS ++++F+
Sbjct: 88 ACGLSRQKQGYARSLAELVVDGTL-DLHALPADDEAAIAQLVQIKGIGRWSAEIYLLFAE 146
Query: 211 HKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSWYMW 261
+PD+ P GDL V+ + + GL E P ++ E W+P+R + W
Sbjct: 147 GRPDIWPAGDLAVQIAVGRILGLGERPSEKLTRDLAEAWRPHRGAAAIMAW 197
>gi|228906230|ref|ZP_04070117.1| DNA-3-methyladenine glycosylase II [Bacillus thuringiensis IBL 200]
gi|228853386|gb|EEM98156.1| DNA-3-methyladenine glycosylase II [Bacillus thuringiensis IBL 200]
Length = 291
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 99/190 (52%), Gaps = 9/190 (4%)
Query: 81 PLLATLIDAHRPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNIL--- 137
PL T A+ P E F L + I++QQ+ K A + +FV + E N +
Sbjct: 106 PLFETY--AYTPIILEFDY--FACLLRCIIHQQINLKFATVLTEQFVKRYGTEKNGVFFF 161
Query: 138 --PDAVLAVSPQQLREIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVK 195
P+ V +S ++LRE S RKA Y+ L G L+ SI + + L ++
Sbjct: 162 PTPEIVANISIEELREQKFSQRKAEYIVGLGRSIVSGTLNLASIETGTEEEVGAQLLPIR 221
Query: 196 GIGAWSVHMFMIFSLHKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSV 255
GIGAW+V F++F L + ++ P D+G+++ +Q ++ L + P +E+V ++ +PY S
Sbjct: 222 GIGAWTVQNFLMFGLGRKNMFPKADIGIQRAVQGIFQLDDKPDDAFLEKVKQECEPYCSY 281
Query: 256 GSWYMWRLME 265
+ Y+W+ +E
Sbjct: 282 AALYLWKSIE 291
>gi|427410248|ref|ZP_18900450.1| hypothetical protein HMPREF9718_02924 [Sphingobium yanoikuyae ATCC
51230]
gi|425712381|gb|EKU75396.1| hypothetical protein HMPREF9718_02924 [Sphingobium yanoikuyae ATCC
51230]
Length = 209
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 86/171 (50%), Gaps = 10/171 (5%)
Query: 91 RPPTFESSRSPFLSLAKSILYQQLAYKAAKSIYTRFVALFNGEDNILPDAVLAVSPQQLR 150
R P +E+ L ++I+ QQ++ +A +++ + A P+A+LA LR
Sbjct: 37 REPGYET-------LLRTIVGQQVSVASAAAVWRKLEAELG--VGCTPEALLARDFDALR 87
Query: 151 EIGVSYRKASYLRDLAEKYTDGILSDESIVEMDDVTMFKMLTSVKGIGAWSVHMFMIFSL 210
G+S +K Y R LAE DG L D + DD L +KGIG WS ++++F+
Sbjct: 88 ACGLSRQKQGYARSLAELVVDGTL-DLHALPADDEVAIAQLVQIKGIGRWSAEIYLLFAE 146
Query: 211 HKPDVLPVGDLGVRKGLQVLYGLKELPGALKMEEVCEKWKPYRSVGSWYMW 261
+PD+ P GDL V+ + + GL E P ++ E W+P+R + W
Sbjct: 147 GRPDIWPAGDLAVQIAVGRILGLGERPSEKLTRDLAEAWRPHRGAAAIMAW 197
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.318 0.133 0.386
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,348,588,803
Number of Sequences: 23463169
Number of extensions: 171808160
Number of successful extensions: 445882
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1644
Number of HSP's successfully gapped in prelim test: 986
Number of HSP's that attempted gapping in prelim test: 441101
Number of HSP's gapped (non-prelim): 2771
length of query: 284
length of database: 8,064,228,071
effective HSP length: 141
effective length of query: 143
effective length of database: 9,050,888,538
effective search space: 1294277060934
effective search space used: 1294277060934
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 76 (33.9 bits)