Query 039705
Match_columns 539
No_of_seqs 355 out of 1774
Neff 7.7
Searched_HMMs 29240
Date Mon Mar 25 21:31:14 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/039705.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/039705hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1k3i_A Galactose oxidase precu 100.0 7.3E-75 2.5E-79 650.6 44.2 449 16-539 172-655 (656)
2 2xn4_A Kelch-like protein 2; s 100.0 3.1E-36 1.1E-40 304.2 30.1 271 41-391 14-302 (302)
3 1zgk_A Kelch-like ECH-associat 100.0 8.3E-36 2.8E-40 302.6 29.2 278 29-385 12-308 (308)
4 3ii7_A Kelch-like protein 7; p 100.0 8.1E-35 2.8E-39 294.4 27.9 265 42-386 11-294 (306)
5 2vpj_A Kelch-like protein 12; 100.0 1.9E-34 6.5E-39 290.7 27.0 269 41-385 13-299 (301)
6 1zgk_A Kelch-like ECH-associat 100.0 3.5E-33 1.2E-37 283.3 30.0 257 101-424 14-288 (308)
7 2xn4_A Kelch-like protein 2; s 100.0 5.4E-33 1.8E-37 280.5 27.9 251 109-424 13-277 (302)
8 2woz_A Kelch repeat and BTB do 100.0 2.9E-33 9.9E-38 285.0 23.8 263 82-395 26-314 (318)
9 3ii7_A Kelch-like protein 7; p 100.0 1.1E-32 3.6E-37 278.8 27.5 251 111-425 11-274 (306)
10 4asc_A Kelch repeat and BTB do 100.0 2.4E-33 8.2E-38 285.2 20.8 263 82-397 15-306 (315)
11 2vpj_A Kelch-like protein 12; 100.0 8.2E-32 2.8E-36 271.4 28.9 248 110-424 13-279 (301)
12 2uvk_A YJHT; unknown function, 100.0 6.9E-32 2.4E-36 278.8 25.3 263 94-400 2-328 (357)
13 4asc_A Kelch repeat and BTB do 100.0 1.8E-30 6.3E-35 263.9 22.9 250 111-424 4-278 (315)
14 2woz_A Kelch repeat and BTB do 100.0 6.4E-30 2.2E-34 260.2 24.4 253 110-425 14-289 (318)
15 2uvk_A YJHT; unknown function, 100.0 2.9E-29 9.8E-34 259.2 24.3 275 33-374 11-352 (357)
16 1k3i_A Galactose oxidase precu 100.0 1.1E-29 3.7E-34 284.3 22.2 293 82-423 168-497 (656)
17 2zwa_A Leucine carboxyl methyl 99.9 5.5E-26 1.9E-30 255.9 28.2 268 21-398 378-675 (695)
18 2zwa_A Leucine carboxyl methyl 99.9 4.2E-23 1.4E-27 232.4 22.9 237 91-424 378-636 (695)
19 3dsm_A Uncharacterized protein 98.0 0.0038 1.3E-07 62.6 27.7 268 81-422 18-301 (328)
20 1got_B GT-beta; complex (GTP-b 98.0 0.0019 6.5E-08 64.8 25.1 249 81-399 78-334 (340)
21 4ery_A WD repeat-containing pr 98.0 0.0052 1.8E-07 60.2 27.6 246 82-397 47-299 (312)
22 3no2_A Uncharacterized protein 97.9 0.0013 4.5E-08 64.7 22.1 219 111-395 4-230 (276)
23 3ow8_A WD repeat-containing pr 97.9 0.0055 1.9E-07 61.1 25.9 243 82-398 60-311 (321)
24 1k8k_C P40, ARP2/3 complex 41 97.8 0.0052 1.8E-07 61.2 24.8 134 82-228 32-172 (372)
25 1gxr_A ESG1, transducin-like e 97.8 0.0062 2.1E-07 59.5 24.7 245 81-398 73-327 (337)
26 2z2n_A Virginiamycin B lyase; 97.8 0.028 9.5E-07 54.0 29.8 239 82-396 38-284 (299)
27 3zwl_B Eukaryotic translation 97.7 0.018 6E-07 56.9 26.6 269 82-399 56-337 (369)
28 3vgz_A Uncharacterized protein 97.7 0.046 1.6E-06 53.8 30.9 247 81-397 70-334 (353)
29 2ynn_A Coatomer subunit beta'; 97.7 0.0044 1.5E-07 61.0 21.4 218 81-362 36-260 (304)
30 3no2_A Uncharacterized protein 97.7 0.0045 1.5E-07 60.8 21.3 204 82-335 17-230 (276)
31 3hfq_A Uncharacterized protein 97.7 0.0038 1.3E-07 62.2 21.2 148 81-233 19-176 (347)
32 1l0q_A Surface layer protein; 97.7 0.012 4E-07 59.4 25.1 242 82-397 14-264 (391)
33 3bws_A Protein LP49; two-domai 97.7 0.011 3.7E-07 60.6 24.8 254 82-397 146-420 (433)
34 4aez_A CDC20, WD repeat-contai 97.6 0.0081 2.8E-07 61.4 23.4 249 81-398 114-370 (401)
35 3q7m_A Lipoprotein YFGL, BAMB; 97.6 0.049 1.7E-06 54.9 28.8 245 82-396 115-367 (376)
36 2pbi_B Guanine nucleotide-bind 97.6 0.019 6.4E-07 58.0 25.1 250 81-398 87-347 (354)
37 2qc5_A Streptogramin B lactona 97.6 0.06 2.1E-06 51.6 29.1 261 33-396 22-290 (300)
38 2hes_X YDR267CP; beta-propelle 97.6 0.0035 1.2E-07 62.6 18.8 261 82-398 36-318 (330)
39 1vyh_C Platelet-activating fac 97.6 0.0088 3E-07 61.7 22.3 256 81-398 131-401 (410)
40 1got_B GT-beta; complex (GTP-b 97.6 0.015 5.2E-07 58.1 23.4 224 108-398 63-291 (340)
41 4e54_B DNA damage-binding prot 97.5 0.019 6.6E-07 59.4 24.7 266 81-396 143-419 (435)
42 3vl1_A 26S proteasome regulato 97.5 0.057 1.9E-06 54.8 27.7 225 81-362 120-366 (420)
43 3jrp_A Fusion protein of prote 97.5 0.0069 2.4E-07 60.3 20.2 241 108-398 19-277 (379)
44 3u4y_A Uncharacterized protein 97.5 0.027 9.2E-07 55.3 24.3 129 81-230 21-161 (331)
45 1gxr_A ESG1, transducin-like e 97.5 0.015 5.1E-07 56.7 22.0 220 107-397 58-285 (337)
46 3hfq_A Uncharacterized protein 97.5 0.037 1.3E-06 54.9 24.7 178 19-233 27-224 (347)
47 1erj_A Transcriptional repress 97.4 0.027 9.2E-07 57.5 24.1 108 106-233 129-242 (393)
48 3scy_A Hypothetical bacterial 97.4 0.046 1.6E-06 54.6 24.9 93 81-177 30-125 (361)
49 1rwi_B Serine/threonine-protei 97.4 0.1 3.5E-06 49.4 25.7 216 107-397 30-253 (270)
50 3iz6_a 40S ribosomal protein R 97.4 0.061 2.1E-06 54.5 25.3 259 81-399 89-366 (380)
51 3dwl_C Actin-related protein 2 97.3 0.0016 5.6E-08 65.5 12.9 232 107-398 18-272 (377)
52 3fm0_A Protein CIAO1; WDR39,SG 97.3 0.0091 3.1E-07 59.9 18.3 189 103-338 19-215 (345)
53 3jro_A Fusion protein of prote 97.3 0.0063 2.2E-07 68.4 18.8 243 109-399 18-276 (753)
54 2pbi_B Guanine nucleotide-bind 97.3 0.043 1.5E-06 55.2 23.4 227 108-398 72-305 (354)
55 4ery_A WD repeat-containing pr 97.3 0.053 1.8E-06 52.9 23.2 222 108-399 31-259 (312)
56 3iz6_a 40S ribosomal protein R 97.3 0.066 2.2E-06 54.3 24.6 233 107-398 73-319 (380)
57 1q7f_A NHL, brain tumor CG1071 97.3 0.079 2.7E-06 50.9 24.1 218 109-395 38-268 (286)
58 3vl1_A 26S proteasome regulato 97.3 0.025 8.6E-07 57.4 21.2 261 81-397 79-354 (420)
59 2ymu_A WD-40 repeat protein; u 97.2 0.057 2E-06 57.4 24.5 240 82-398 327-570 (577)
60 3ow8_A WD repeat-containing pr 97.2 0.13 4.5E-06 50.8 25.3 204 81-338 103-311 (321)
61 3ei3_B DNA damage-binding prot 97.2 0.056 1.9E-06 54.3 22.8 133 82-229 98-236 (383)
62 1rwi_B Serine/threonine-protei 97.2 0.16 5.6E-06 48.0 25.4 133 82-233 48-184 (270)
63 3vgz_A Uncharacterized protein 97.2 0.1 3.5E-06 51.3 24.0 228 108-397 48-292 (353)
64 1l0q_A Surface layer protein; 97.2 0.057 1.9E-06 54.3 22.5 133 81-234 55-194 (391)
65 2aq5_A Coronin-1A; WD40 repeat 97.2 0.027 9.2E-07 57.4 20.3 230 108-397 89-333 (402)
66 1ri6_A Putative isomerase YBHE 97.2 0.16 5.5E-06 49.4 25.2 240 82-375 62-321 (343)
67 3dsm_A Uncharacterized protein 97.2 0.095 3.2E-06 52.2 23.8 215 124-395 16-243 (328)
68 1nr0_A Actin interacting prote 97.2 0.09 3.1E-06 57.2 25.4 136 81-233 213-359 (611)
69 2pm7_B Protein transport prote 97.1 0.041 1.4E-06 53.7 20.6 240 108-398 17-275 (297)
70 2ynn_A Coatomer subunit beta'; 97.1 0.023 8E-07 55.7 18.8 222 108-398 21-249 (304)
71 3u4y_A Uncharacterized protein 97.1 0.22 7.6E-06 48.5 26.0 141 81-232 63-210 (331)
72 2ovr_B FBW7, F-BOX/WD repeat p 97.1 0.16 5.6E-06 52.2 25.6 243 81-400 180-430 (445)
73 1r5m_A SIR4-interacting protei 97.1 0.037 1.3E-06 55.7 20.2 246 82-399 132-416 (425)
74 3dm0_A Maltose-binding peripla 97.1 0.12 4E-06 57.0 25.7 251 81-399 406-684 (694)
75 2pm7_B Protein transport prote 97.1 0.085 2.9E-06 51.4 21.9 206 111-373 66-295 (297)
76 3jrp_A Fusion protein of prote 97.1 0.027 9.1E-07 55.9 18.5 232 82-373 35-297 (379)
77 4gga_A P55CDC, cell division c 97.1 0.048 1.6E-06 56.0 20.9 133 81-231 126-263 (420)
78 3mkq_A Coatomer beta'-subunit; 97.0 0.1 3.5E-06 58.1 24.9 218 81-362 36-260 (814)
79 3dwl_C Actin-related protein 2 97.0 0.0098 3.4E-07 59.7 15.1 137 82-230 35-178 (377)
80 1pgu_A Actin interacting prote 97.0 0.072 2.5E-06 56.8 22.6 251 82-399 41-319 (615)
81 3scy_A Hypothetical bacterial 97.0 0.19 6.3E-06 50.1 24.3 141 84-233 81-246 (361)
82 2z2n_A Virginiamycin B lyase; 97.0 0.27 9.3E-06 46.8 26.0 131 82-233 80-216 (299)
83 4h5i_A Guanine nucleotide-exch 96.9 0.2 7E-06 50.5 24.2 233 109-399 80-334 (365)
84 3i2n_A WD repeat-containing pr 96.9 0.085 2.9E-06 51.7 20.8 144 81-233 45-203 (357)
85 3fvz_A Peptidyl-glycine alpha- 96.9 0.39 1.3E-05 47.5 25.8 148 81-236 70-234 (329)
86 2ymu_A WD-40 repeat protein; u 96.9 0.19 6.4E-06 53.3 24.6 241 82-397 286-528 (577)
87 1ri6_A Putative isomerase YBHE 96.9 0.17 5.7E-06 49.3 22.5 117 106-233 43-165 (343)
88 1nir_A Nitrite reductase; hemo 96.9 0.048 1.6E-06 58.8 19.9 309 19-425 125-460 (543)
89 3fm0_A Protein CIAO1; WDR39,SG 96.9 0.022 7.6E-07 57.0 16.2 189 154-399 21-216 (345)
90 2xbg_A YCF48-like protein; pho 96.9 0.29 9.8E-06 48.8 24.4 239 90-397 25-269 (327)
91 3q7m_A Lipoprotein YFGL, BAMB; 96.9 0.29 1E-05 49.1 24.7 218 106-396 48-285 (376)
92 3odt_A Protein DOA1; ubiquitin 96.9 0.28 9.7E-06 46.8 23.6 240 82-397 41-285 (313)
93 1nr0_A Actin interacting prote 96.8 0.14 4.7E-06 55.7 23.2 145 208-399 198-346 (611)
94 3bg1_A Protein SEC13 homolog; 96.8 0.036 1.2E-06 54.7 16.8 238 109-398 22-283 (316)
95 3sfz_A APAF-1, apoptotic pepti 96.8 0.15 5.3E-06 59.8 24.9 253 82-399 639-904 (1249)
96 3bws_A Protein LP49; two-domai 96.8 0.13 4.6E-06 52.3 21.4 137 81-236 192-341 (433)
97 1p22_A F-BOX/WD-repeat protein 96.8 0.25 8.5E-06 50.7 23.6 209 82-362 155-366 (435)
98 1r5m_A SIR4-interacting protei 96.8 0.13 4.5E-06 51.6 21.0 226 106-398 114-351 (425)
99 4g56_B MGC81050 protein; prote 96.7 0.26 8.8E-06 49.5 22.7 226 107-399 101-334 (357)
100 3mmy_A MRNA export factor; mRN 96.7 0.36 1.2E-05 47.2 23.3 90 82-180 66-160 (368)
101 1k8k_C P40, ARP2/3 complex 41 96.7 0.08 2.7E-06 52.4 18.5 189 154-398 13-223 (372)
102 2xzm_R RACK1; ribosome, transl 96.7 0.54 1.9E-05 46.5 24.7 62 107-177 83-145 (343)
103 2ojh_A Uncharacterized protein 96.7 0.19 6.6E-06 47.3 20.4 81 81-169 23-104 (297)
104 3sfz_A APAF-1, apoptotic pepti 96.5 0.17 6E-06 59.4 22.9 245 82-399 985-1240(1249)
105 4aow_A Guanine nucleotide-bind 96.5 0.64 2.2E-05 45.0 24.4 223 107-399 93-328 (340)
106 3v7d_B Cell division control p 96.5 0.4 1.4E-05 49.3 23.2 245 82-396 144-410 (464)
107 1erj_A Transcriptional repress 96.5 0.31 1.1E-05 49.4 21.8 137 82-230 147-288 (393)
108 4gqb_B Methylosome protein 50; 96.5 0.32 1.1E-05 48.7 21.4 226 107-399 89-322 (344)
109 3bg1_A Protein SEC13 homolog; 96.5 0.12 4.2E-06 50.8 18.0 207 111-373 70-303 (316)
110 3jro_A Fusion protein of prote 96.5 0.092 3.2E-06 58.8 18.9 233 82-374 33-296 (753)
111 1vyh_C Platelet-activating fac 96.5 0.12 4E-06 53.1 18.4 109 107-233 115-227 (410)
112 4g56_B MGC81050 protein; prote 96.4 0.1 3.5E-06 52.5 17.5 120 106-234 48-175 (357)
113 4ggc_A P55CDC, cell division c 96.4 0.26 9E-06 47.3 19.9 132 82-231 47-183 (318)
114 4a11_B DNA excision repair pro 96.4 0.072 2.5E-06 53.3 16.2 110 106-232 49-178 (408)
115 2ovr_B FBW7, F-BOX/WD repeat p 96.4 0.88 3E-05 46.6 24.6 236 82-398 141-381 (445)
116 2pm9_A Protein WEB1, protein t 96.3 0.29 9.8E-06 49.2 19.8 236 108-398 20-284 (416)
117 1yfq_A Cell cycle arrest prote 96.3 0.71 2.4E-05 44.8 22.2 63 107-177 63-127 (342)
118 2pm9_A Protein WEB1, protein t 96.3 0.17 6E-06 50.8 18.1 115 107-236 172-301 (416)
119 1q7f_A NHL, brain tumor CG1071 96.2 0.75 2.6E-05 43.9 21.8 181 157-397 37-226 (286)
120 3zwl_B Eukaryotic translation 96.2 0.11 3.8E-06 51.0 16.1 227 107-400 39-282 (369)
121 1sq9_A Antiviral protein SKI8; 96.2 0.19 6.3E-06 50.3 17.7 113 113-236 82-223 (397)
122 3v9f_A Two-component system se 96.1 2.3 8E-05 47.4 29.9 248 83-397 386-647 (781)
123 1jmx_B Amine dehydrogenase; ox 96.1 0.8 2.7E-05 44.5 21.7 140 81-236 22-182 (349)
124 3ei3_B DNA damage-binding prot 96.1 0.93 3.2E-05 45.1 22.6 195 107-362 80-283 (383)
125 2xbg_A YCF48-like protein; pho 96.0 1.3 4.6E-05 43.8 27.8 217 111-397 89-312 (327)
126 3v7d_B Cell division control p 96.0 0.95 3.3E-05 46.4 22.7 213 81-362 184-422 (464)
127 3i2n_A WD repeat-containing pr 96.0 0.21 7.1E-06 48.9 16.9 235 109-398 27-281 (357)
128 3mkq_A Coatomer beta'-subunit; 96.0 1.3 4.5E-05 48.9 25.3 137 81-233 78-221 (814)
129 4aez_A CDC20, WD repeat-contai 96.0 1.3 4.6E-05 44.6 23.5 213 81-362 157-381 (401)
130 3lrv_A PRE-mRNA-splicing facto 96.0 0.7 2.4E-05 45.6 20.6 108 108-231 133-246 (343)
131 1nir_A Nitrite reductase; hemo 95.9 0.39 1.3E-05 51.7 19.8 226 108-396 145-389 (543)
132 4e54_B DNA damage-binding prot 95.9 0.62 2.1E-05 47.8 20.6 228 111-400 131-367 (435)
133 3frx_A Guanine nucleotide-bind 95.8 1.3 4.4E-05 43.3 21.8 135 81-233 88-231 (319)
134 3k26_A Polycomb protein EED; W 95.8 0.57 1.9E-05 45.8 19.2 91 81-177 96-188 (366)
135 3f3f_A Nucleoporin SEH1; struc 95.8 1.4 4.9E-05 42.1 22.2 113 109-231 20-145 (351)
136 3frx_A Guanine nucleotide-bind 95.8 1 3.6E-05 44.0 20.8 222 107-399 72-308 (319)
137 3odt_A Protein DOA1; ubiquitin 95.7 1.4 4.8E-05 41.8 21.2 101 110-226 27-130 (313)
138 4gqb_B Methylosome protein 50; 95.7 0.18 6.1E-06 50.7 15.0 140 208-398 135-279 (344)
139 3k26_A Polycomb protein EED; W 95.7 0.41 1.4E-05 46.8 17.4 103 112-231 85-194 (366)
140 1jmx_B Amine dehydrogenase; ox 95.7 0.53 1.8E-05 45.8 18.1 64 109-181 8-75 (349)
141 3nol_A Glutamine cyclotransfer 95.7 0.7 2.4E-05 44.9 18.3 189 157-418 49-254 (262)
142 2dg1_A DRP35, lactonase; beta 95.7 1.8 6E-05 42.2 23.2 111 107-233 51-175 (333)
143 1pby_B Quinohemoprotein amine 95.5 1.9 6.4E-05 41.4 21.2 135 82-234 13-168 (337)
144 2iwa_A Glutamine cyclotransfer 95.4 0.69 2.3E-05 45.1 17.4 186 153-399 24-228 (266)
145 3lrv_A PRE-mRNA-splicing facto 95.4 1.8 6.2E-05 42.5 21.1 68 155-231 131-203 (343)
146 3fvz_A Peptidyl-glycine alpha- 95.4 2.3 7.8E-05 41.8 29.0 240 107-397 30-311 (329)
147 1p22_A F-BOX/WD-repeat protein 95.4 1 3.4E-05 46.1 19.8 210 109-398 140-355 (435)
148 3dw8_B Serine/threonine-protei 95.4 2.7 9.1E-05 42.4 23.0 71 154-231 182-260 (447)
149 1pgu_A Actin interacting prote 95.4 1.8 6.2E-05 45.7 22.3 230 102-399 20-274 (615)
150 3mbr_X Glutamine cyclotransfer 95.3 2 6.9E-05 41.2 20.1 191 157-418 27-233 (243)
151 2hqs_A Protein TOLB; TOLB, PAL 95.3 1.4 4.6E-05 45.3 20.5 60 322-398 315-374 (415)
152 3nok_A Glutaminyl cyclase; bet 95.2 1.4 4.6E-05 43.0 18.5 180 157-397 61-255 (268)
153 3f3f_A Nucleoporin SEH1; struc 95.2 2.3 7.9E-05 40.5 23.6 62 111-177 70-139 (351)
154 4h5i_A Guanine nucleotide-exch 94.9 0.75 2.6E-05 46.2 16.6 192 106-362 139-344 (365)
155 4d9s_A UVB-resistance protein 94.9 1.4 4.7E-05 45.4 18.9 72 320-400 287-359 (406)
156 1w8o_A Bacterial sialidase; 3D 94.8 5.4 0.00018 43.0 28.2 131 361-524 305-438 (601)
157 3gre_A Serine/threonine-protei 94.8 0.67 2.3E-05 47.2 16.3 136 85-234 48-206 (437)
158 1yfq_A Cell cycle arrest prote 94.7 2.3 7.8E-05 41.1 19.4 108 107-229 18-131 (342)
159 1pjx_A Dfpase, DIISOPROPYLFLUO 94.7 3 0.0001 39.8 22.7 110 109-233 26-165 (314)
160 3dm0_A Maltose-binding peripla 94.7 3.4 0.00011 45.2 22.7 138 81-233 453-596 (694)
161 1sq9_A Antiviral protein SKI8; 94.6 1.3 4.6E-05 43.9 17.7 140 82-236 93-274 (397)
162 2ecf_A Dipeptidyl peptidase IV 94.6 5.4 0.00019 43.6 24.1 110 34-177 40-177 (741)
163 3hrp_A Uncharacterized protein 94.6 4.8 0.00016 41.2 23.7 111 107-233 137-253 (409)
164 3mmy_A MRNA export factor; mRN 94.6 0.48 1.6E-05 46.3 13.9 103 112-232 54-163 (368)
165 2aq5_A Coronin-1A; WD40 repeat 94.5 2.2 7.6E-05 42.8 19.3 232 110-397 44-288 (402)
166 2xzm_R RACK1; ribosome, transl 94.4 2.9 0.0001 41.0 19.6 134 81-229 99-244 (343)
167 3dw8_B Serine/threonine-protei 94.4 3.3 0.00011 41.7 20.5 24 107-133 35-58 (447)
168 2qc5_A Streptogramin B lactona 94.4 3.5 0.00012 38.9 24.3 218 107-397 26-249 (300)
169 4gga_A P55CDC, cell division c 94.2 5.3 0.00018 40.4 22.3 101 112-231 116-220 (420)
170 3vu4_A KMHSV2; beta-propeller 94.0 5.3 0.00018 39.6 23.5 62 323-397 246-325 (355)
171 1jof_A Carboxy-CIS,CIS-muconat 93.3 6.6 0.00023 38.9 20.0 48 82-133 18-68 (365)
172 2bkl_A Prolyl endopeptidase; m 93.3 7.3 0.00025 42.6 21.9 163 40-236 129-314 (695)
173 2vdu_B TRNA (guanine-N(7)-)-me 93.2 4.9 0.00017 41.1 19.1 153 154-362 107-272 (450)
174 2ecf_A Dipeptidyl peptidase IV 92.5 4 0.00014 44.7 18.2 116 107-233 43-185 (741)
175 2iwa_A Glutamine cyclotransfer 92.1 2.4 8.1E-05 41.2 13.9 107 203-362 22-136 (266)
176 3o4h_A Acylamino-acid-releasin 92.0 5.9 0.0002 42.0 18.5 50 325-398 253-302 (582)
177 2dg1_A DRP35, lactonase; beta 92.0 5 0.00017 38.8 16.5 84 82-168 68-153 (333)
178 2xyi_A Probable histone-bindin 91.1 10 0.00035 38.4 18.6 113 107-230 135-264 (430)
179 2hqs_A Protein TOLB; TOLB, PAL 91.1 6.9 0.00024 39.8 17.2 136 81-233 204-348 (415)
180 2hes_X YDR267CP; beta-propelle 91.1 1.7 6E-05 42.6 12.2 99 268-399 118-221 (330)
181 3e5z_A Putative gluconolactona 90.9 11 0.00037 35.7 19.5 137 82-232 92-249 (296)
182 1qks_A Cytochrome CD1 nitrite 90.9 20 0.00067 38.5 21.1 88 81-177 178-271 (567)
183 3e5z_A Putative gluconolactona 90.7 11 0.00039 35.6 22.9 78 82-166 52-131 (296)
184 2z3z_A Dipeptidyl aminopeptida 90.5 15 0.00051 39.8 20.2 57 324-396 316-375 (706)
185 1pby_B Quinohemoprotein amine 90.5 8.9 0.00031 36.5 16.5 111 113-236 2-131 (337)
186 3c5m_A Oligogalacturonate lyas 90.4 8.9 0.0003 37.6 16.9 49 82-133 62-110 (396)
187 3mbr_X Glutamine cyclotransfer 90.2 5.7 0.0002 37.9 14.4 106 205-362 24-134 (243)
188 1pjx_A Dfpase, DIISOPROPYLFLUO 90.0 12 0.00042 35.3 17.0 70 156-233 24-104 (314)
189 3pe7_A Oligogalacturonate lyas 89.6 16 0.00056 35.7 20.3 54 81-139 61-114 (388)
190 4a11_B DNA excision repair pro 89.1 18 0.0006 35.4 19.8 142 211-399 111-267 (408)
191 4aow_A Guanine nucleotide-bind 88.7 4 0.00014 39.1 12.4 137 82-231 197-339 (340)
192 3g4e_A Regucalcin; six bladed 88.4 18 0.0006 34.6 16.9 143 82-236 75-236 (297)
193 3nol_A Glutamine cyclotransfer 88.2 5.9 0.0002 38.3 12.8 105 206-362 47-156 (262)
194 3hrp_A Uncharacterized protein 88.0 25 0.00085 35.7 25.1 158 33-230 133-299 (409)
195 4a2l_A BT_4663, two-component 87.8 37 0.0013 37.5 36.6 251 82-397 379-650 (795)
196 2oaj_A Protein SNI1; WD40 repe 86.2 16 0.00054 41.6 17.2 63 109-177 444-515 (902)
197 2fp8_A Strictosidine synthase; 85.8 26 0.00089 33.7 19.9 91 296-396 208-301 (322)
198 3o4h_A Acylamino-acid-releasin 85.8 9.8 0.00034 40.3 14.4 224 105-397 26-265 (582)
199 3nok_A Glutaminyl cyclase; bet 85.1 9.9 0.00034 36.8 12.5 103 206-362 59-165 (268)
200 2oaj_A Protein SNI1; WD40 repe 84.8 58 0.002 36.9 22.7 105 107-232 24-132 (902)
201 2p9w_A MAL S 1 allergenic prot 84.4 16 0.00055 36.5 14.1 91 294-397 99-204 (334)
202 3g4e_A Regucalcin; six bladed 83.6 31 0.0011 32.8 21.0 59 111-181 24-83 (297)
203 2vdu_B TRNA (guanine-N(7)-)-me 83.1 33 0.0011 34.7 16.6 91 81-177 221-335 (450)
204 3v9f_A Two-component system se 82.7 62 0.0021 35.6 20.2 138 82-236 471-617 (781)
205 3dr2_A Exported gluconolactona 81.6 31 0.0011 32.8 15.0 137 82-232 109-270 (305)
206 3hxj_A Pyrrolo-quinoline quino 79.6 42 0.0014 31.7 19.7 97 108-228 67-165 (330)
207 2ojh_A Uncharacterized protein 78.9 38 0.0013 30.8 22.7 222 110-399 8-238 (297)
208 2z3z_A Dipeptidyl aminopeptida 78.5 76 0.0026 34.0 27.1 80 81-168 102-199 (706)
209 3a72_A EXO-arabinanase; arabin 78.1 59 0.002 32.5 17.1 67 152-218 25-104 (355)
210 3tc9_A Hypothetical hydrolase; 77.8 16 0.00056 37.5 12.0 130 211-396 149-289 (430)
211 4ggc_A P55CDC, cell division c 77.7 46 0.0016 31.0 21.7 87 81-177 90-177 (318)
212 3a72_A EXO-arabinanase; arabin 77.4 16 0.00054 36.9 11.4 172 200-394 22-221 (355)
213 2oiz_A Aromatic amine dehydrog 77.0 59 0.002 32.0 20.5 73 295-390 286-360 (361)
214 1qks_A Cytochrome CD1 nitrite 76.0 87 0.003 33.4 19.4 106 110-236 165-282 (567)
215 3sjl_D Methylamine dehydrogena 75.9 72 0.0025 32.4 16.3 52 81-133 110-168 (386)
216 2fp8_A Strictosidine synthase; 75.2 59 0.002 31.1 18.6 133 83-231 104-271 (322)
217 2p4o_A Hypothetical protein; p 74.6 61 0.0021 30.9 25.0 80 31-143 32-111 (306)
218 1kv9_A Type II quinohemoprotei 74.4 1E+02 0.0035 33.4 29.1 100 82-186 78-193 (668)
219 2ydt_A EXO-1,5-alpha-L-arabino 72.5 84 0.0029 31.6 21.6 57 327-400 286-346 (367)
220 1xfd_A DIP, dipeptidyl aminope 72.5 89 0.003 33.5 16.9 262 81-398 38-380 (723)
221 2ad6_A Methanol dehydrogenase 71.1 1.1E+02 0.0038 32.4 29.7 101 82-186 75-191 (571)
222 1kb0_A Quinohemoprotein alcoho 70.7 1.2E+02 0.0043 32.8 18.9 116 108-234 74-206 (677)
223 3kci_A Probable E3 ubiquitin-p 70.4 30 0.001 34.8 11.6 73 320-400 223-295 (389)
224 2ad6_A Methanol dehydrogenase 70.3 57 0.0019 34.8 14.4 122 208-369 59-192 (571)
225 3dr2_A Exported gluconolactona 66.4 43 0.0015 31.8 11.4 68 322-396 135-207 (305)
226 3c5m_A Oligogalacturonate lyas 66.0 97 0.0033 29.8 20.7 84 82-169 12-100 (396)
227 3azo_A Aminopeptidase; POP fam 65.8 1.4E+02 0.0048 31.6 16.9 92 81-177 218-319 (662)
228 3pe7_A Oligogalacturonate lyas 64.1 1.1E+02 0.0036 29.6 18.0 60 106-169 41-100 (388)
229 3vu4_A KMHSV2; beta-propeller 63.9 62 0.0021 31.5 12.3 49 82-133 220-270 (355)
230 4hw6_A Hypothetical protein, I 63.4 50 0.0017 33.8 11.8 140 203-396 140-292 (433)
231 1k32_A Tricorn protease; prote 62.5 2.1E+02 0.0072 32.5 23.8 131 84-233 321-465 (1045)
232 2xyi_A Probable histone-bindin 61.8 1.3E+02 0.0045 29.9 20.1 112 107-229 188-309 (430)
233 2xdw_A Prolyl endopeptidase; a 61.6 1.8E+02 0.0061 31.4 22.3 108 36-169 130-252 (710)
234 1tl2_A L10, protein (tachylect 59.2 46 0.0016 31.4 9.4 101 106-218 93-199 (236)
235 3ott_A Two-component system se 58.6 2.1E+02 0.0071 31.1 24.1 132 210-397 481-617 (758)
236 2w18_A PALB2, fancn, partner a 57.9 1.5E+02 0.0051 29.7 13.7 42 353-399 306-348 (356)
237 4d9s_A UVB-resistance protein 56.8 47 0.0016 33.6 10.1 73 320-400 235-307 (406)
238 2j04_A TAU60, YPL007P, hypothe 55.4 1.5E+02 0.0052 31.8 14.0 112 103-232 132-257 (588)
239 1yiq_A Quinohemoprotein alcoho 54.3 2.4E+02 0.0082 30.6 24.2 100 82-186 82-198 (689)
240 1npe_A Nidogen, entactin; glyc 52.7 1.4E+02 0.0048 27.4 17.0 114 105-237 126-246 (267)
241 3ott_A Two-component system se 50.1 2.3E+02 0.0078 30.8 15.1 126 82-229 495-626 (758)
242 1yr2_A Prolyl oligopeptidase; 49.8 2.8E+02 0.0095 30.0 23.1 143 81-236 190-359 (741)
243 1flg_A Protein (quinoprotein e 49.0 2E+02 0.0069 30.6 14.0 27 208-234 65-94 (582)
244 1jof_A Carboxy-CIS,CIS-muconat 48.9 1.9E+02 0.0066 27.9 13.4 49 81-131 168-221 (365)
245 1kb0_A Quinohemoprotein alcoho 47.5 3E+02 0.01 29.7 27.1 101 82-186 89-205 (677)
246 3azo_A Aminopeptidase; POP fam 47.2 1.8E+02 0.0063 30.6 13.4 90 81-177 266-363 (662)
247 3gre_A Serine/threonine-protei 46.9 66 0.0022 31.9 9.2 50 81-133 193-244 (437)
248 2p4o_A Hypothetical protein; p 46.4 72 0.0025 30.3 9.1 80 296-395 54-134 (306)
249 1w8o_A Bacterial sialidase; 3D 41.8 86 0.0029 33.3 9.6 125 89-218 199-339 (601)
250 4a2l_A BT_4663, two-component 40.9 3.9E+02 0.013 29.1 30.7 138 82-233 237-390 (795)
251 3tc9_A Hypothetical hydrolase; 37.5 2.2E+02 0.0076 28.7 11.6 59 103-167 228-288 (430)
252 3qhy_B Beta-lactamase inhibito 36.8 1.1E+02 0.0036 29.3 8.5 58 321-400 191-248 (282)
253 1kv9_A Type II quinohemoprotei 36.7 50 0.0017 36.0 6.8 96 268-396 66-170 (668)
254 2ece_A 462AA long hypothetical 35.9 3.9E+02 0.013 27.7 18.3 114 110-236 93-244 (462)
255 1w6s_A Methanol dehydrogenase 35.6 4.3E+02 0.015 28.1 22.3 101 82-186 75-197 (599)
256 2ghs_A AGR_C_1268P; regucalcin 35.4 1.5E+02 0.0053 28.2 9.6 78 296-395 72-151 (326)
257 2vov_A MOPE, surface-associate 35.3 50 0.0017 30.0 5.2 32 501-538 279-331 (336)
258 1yiq_A Quinohemoprotein alcoho 35.3 63 0.0021 35.4 7.3 96 268-396 70-175 (689)
259 2xdw_A Prolyl endopeptidase; a 33.3 4.7E+02 0.016 27.9 21.5 60 105-169 129-190 (710)
260 3mvd_K Regulator of chromosome 32.4 68 0.0023 32.4 6.6 73 320-400 304-376 (423)
261 4gq1_A NUP37; propeller, trans 31.5 3.7E+02 0.013 26.1 12.9 116 210-362 99-219 (393)
262 1k32_A Tricorn protease; prote 31.5 2.4E+02 0.0082 32.0 11.7 84 81-169 401-491 (1045)
263 2jkb_A Sialidase B; intramolec 30.9 5.5E+02 0.019 27.9 14.6 39 357-395 617-657 (686)
264 1tl2_A L10, protein (tachylect 29.9 86 0.0029 29.5 6.1 100 109-218 49-152 (236)
265 2ghs_A AGR_C_1268P; regucalcin 29.0 2.3E+02 0.0077 27.0 9.6 74 82-166 73-150 (326)
266 2vsd_A CHIR AB1; immune system 27.2 1.9E+02 0.0065 22.5 7.2 39 431-476 4-43 (105)
267 4hw6_A Hypothetical protein, I 27.1 4.8E+02 0.016 26.3 12.1 60 102-167 229-291 (433)
268 2qe8_A Uncharacterized protein 26.5 77 0.0026 30.7 5.6 58 323-398 253-311 (343)
269 2oiz_A Aromatic amine dehydrog 25.4 1.5E+02 0.0051 29.0 7.6 73 81-162 287-360 (361)
270 2xzi_A KDNAse, extracellular s 23.6 2E+02 0.0068 28.7 8.2 121 19-166 215-352 (386)
271 2hz6_A Endoplasmic reticulum t 22.8 27 0.00094 34.7 1.4 56 296-369 20-75 (369)
272 1n7d_A LDL receptor, low-densi 22.6 7.5E+02 0.026 26.7 13.3 165 32-237 454-622 (699)
273 3hxj_A Pyrrolo-quinoline quino 22.3 4.6E+02 0.016 24.1 22.9 126 82-231 119-246 (330)
274 1w6s_A Methanol dehydrogenase 21.7 2.3E+02 0.008 30.2 8.7 76 81-166 454-532 (599)
275 2xzi_A KDNAse, extracellular s 21.6 5.9E+02 0.02 25.1 12.5 146 206-394 190-352 (386)
276 2j04_B YDR362CP, TAU91; beta p 21.3 2.1E+02 0.0071 29.9 8.0 104 109-230 319-429 (524)
277 1flg_A Protein (quinoprotein e 20.9 2.8E+02 0.0097 29.3 9.1 76 81-166 467-545 (582)
278 4fj6_A Glycoside hydrolase fam 20.7 7.3E+02 0.025 25.9 13.8 129 84-217 356-502 (523)
279 1cru_A Protein (soluble quinop 20.7 5E+02 0.017 26.4 10.7 29 21-51 18-46 (454)
280 3kci_A Probable E3 ubiquitin-p 20.2 1.2E+02 0.0041 30.2 5.7 72 321-400 276-347 (389)
No 1
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=100.00 E-value=7.3e-75 Score=650.64 Aligned_cols=449 Identities=18% Similarity=0.300 Sum_probs=350.8
Q ss_pred ccCCCceEEccCCCcccceEEEecCCCCEEEEEccccCCCCCccCCCcccccCCCccccccccceeEEEEECCCCCEEeC
Q 039705 16 YEFKGKWELASENSGISAMHIILFPNTNKAIMLDAVSLGPSNVRLPVGIYRLNPGAWQKYVDYRALAVEYDAESAAIRPL 95 (539)
Q Consensus 16 ~~~~g~W~~~~~~~~~~~~~~~ll~~~gkv~~~g~~~~~~~~~~~~~g~~~~~~~~~~g~~~~~~~~~~yDp~t~~w~~l 95 (539)
.+..++|+.+.+ .|....|+++++.+||||++||.... ... + .......+.+||+.+++|+++
T Consensus 172 dp~~~~W~~~~~-~P~~~~~~av~~~~g~l~v~GG~~~~--~~~---~-----------~~~~~~~~~~yd~~t~~w~~~ 234 (656)
T 1k3i_A 172 QPGLGRWGPTID-LPIVPAAAAIEPTSGRVLMWSSYRND--AFG---G-----------SPGGITLTSSWDPSTGIVSDR 234 (656)
T ss_dssp CTTSCEEEEEEE-CSSCCSEEEEETTTTEEEEEEECCCT--TTC---S-----------CCCSEEEEEEECTTTCCBCCC
T ss_pred CCCCCeeeeecc-CCCCceeEEEEecCCEEEEEeccccc--ccc---c-----------CCCCeEEEEEEeCCCCcEEeC
Confidence 456799999874 67788899998339999999997521 100 0 001234678999999999998
Q ss_pred ccC---CCcccccceecCCCcEEEecCCCCCCCeEEEEeCCCCccceeecccccccccccceeEEccCCcEEEEcCc-cC
Q 039705 96 KIL---TDTWSSSGGLSANGTIVISGGWSSRGRSVRYLSGCYHACYWKEHHWELSAKRWFSTQHILPDGSFIVVGGR-RE 171 (539)
Q Consensus 96 ~~~---~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydP~~~t~~W~~~~~~m~~~R~y~s~~~L~dG~VyvvGG~-~~ 171 (539)
+.+ ...+|++.+++.||+||++||..+ .++++|||+ +++|+++++ |+.+||++++++++||+|||+||. +.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~--~~v~~yd~~--t~~W~~~~~-~~~~R~~~s~~~~~dg~iyv~GG~~~~ 309 (656)
T 1k3i_A 235 TVTVTKHDMFCPGISMDGNGQIVVTGGNDA--KKTSLYDSS--SDSWIPGPD-MQVARGYQSSATMSDGRVFTIGGSWSG 309 (656)
T ss_dssp EEEECSCCCSSCEEEECTTSCEEEECSSST--TCEEEEEGG--GTEEEECCC-CSSCCSSCEEEECTTSCEEEECCCCCS
T ss_pred cccCCCCCCccccccCCCCCCEEEeCCCCC--CceEEecCc--CCceeECCC-CCccccccceEEecCCeEEEEeCcccC
Confidence 766 456787778889999999999754 479999999 999999987 999999999999989999999995 32
Q ss_pred ----CeEEEE-ecCCCcceeec------cCccccCCCCCCCCcceEEEeeCCcEEEEEcC-----------ceeEeeCCC
Q 039705 172 ----FSYEYI-LKEGKRIIYDL------PILNETTNPSENNLYPFVFLSTDGNLFIFAND-----------RSILLNPET 229 (539)
Q Consensus 172 ----~~~E~y-P~~~~~~w~~~------~~l~~~~~~~~~~~yp~~~~~~~G~Iyv~Gg~-----------~~e~yDp~t 229 (539)
.++|+| |.++ +|..+ |++..+ . ++++..+++||++||. ++++||+++
T Consensus 310 ~~~~~~~e~yd~~t~--~W~~~~~~~~~p~~~~~--------~-~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~ 378 (656)
T 1k3i_A 310 GVFEKNGEVYSPSSK--TWTSLPNAKVNPMLTAD--------K-QGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSG 378 (656)
T ss_dssp SSCCCCEEEEETTTT--EEEEETTSCSGGGCCCC--------T-TGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECST
T ss_pred CcccccceEeCCCCC--cceeCCCcccccccccc--------c-cceeecCCceEEEECCCCcEEEecCccceeeeecCC
Confidence 578999 9887 99764 222221 1 1233468889999863 368999999
Q ss_pred CeEEEEcccCCCCC--CccCCCccEEecccccCCCCCCCcccEEEEecCCCCCcccccCCCcccccCCceEEEEeeCC-C
Q 039705 230 NEILHVFPILRGGS--RNYPASATSALLPIKLQDPNSNAIRAEVLICGGAKPEAGVLAGKGEFMNALQDCGRIEITNK-S 306 (539)
Q Consensus 230 n~W~~~~p~mp~~~--r~yp~~g~av~lpl~~~~~~~~~~~g~Iyv~GG~~~~~~~~~~~~~~~~a~~s~~~~d~~~~-~ 306 (539)
++|.+.....+..+ ...+.++++++++. .+++||++||.+.... ..+++.|.+++..++ +
T Consensus 379 ~~w~~~~~~~~~~~~~~~~~~~~~av~~~~---------~~~~i~v~GG~~~~~~--------~~~~~~~~~v~~yd~~~ 441 (656)
T 1k3i_A 379 SGDVKSAGKRQSNRGVAPDAMCGNAVMYDA---------VKGKILTFGGSPDYQD--------SDATTNAHIITLGEPGT 441 (656)
T ss_dssp TCEEEEEEECEETTEECCCCBTCEEEEEET---------TTTEEEEECCBSSSSS--------SBCCCCEEEEECCSTTS
T ss_pred cceeecCCccccccccCCCCCCCceEeccC---------CCCeEEEEeCCCCCCC--------CCcCCcceEEEcCCCCC
Confidence 99984332222100 01234577777652 3799999999752110 134554444444333 5
Q ss_pred Cceeee---ccCCCceeceeEEecCCcEEEEcCcCCCCCCcccCCCCCCccEEEcCCCCCCCceEecCCCCCCccceeeE
Q 039705 307 ATWQRE---MMPSPRVMGEMLLLPTGDVLIINGAKKGTAGWNFATDPNTTPVLYEPDDPINERFSELTPTSKPRMCHSTS 383 (539)
Q Consensus 307 ~~W~~~---~M~~~R~~~~~vvlpdG~I~vvGG~~~g~~g~~~~~~~~~~~e~YdP~t~~g~~Wt~~a~~~~~R~yhs~a 383 (539)
++|+.. +|+.+|.++++++++||+|||+||.+.+. +|. +..++.++|+|||+++ +|+.+++|+++|.+|+++
T Consensus 442 ~~W~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~-~~~-~~~~~~~v~~ydp~t~---~W~~~~~~~~~R~~hs~a 516 (656)
T 1k3i_A 442 SPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGI-PFE-DSTPVFTPEIYVPEQD---TFYKQNPNSIVRVYHSIS 516 (656)
T ss_dssp CCEEEECTTCCSSCCBSCEEEECTTSCEEEECCBSBCC-TTC-CCSBCCCCEEEEGGGT---EEEECCCCSSCCCTTEEE
T ss_pred CCeeEEccCCCCCCcccCCeEECCCCCEEEECCcccCc-CcC-CCCcccceEEEcCCCC---ceeecCCCCCccccccHh
Confidence 789863 89999999999999999999999986432 222 3456778999999999 999999999999999999
Q ss_pred eeCCCCeEEEecCCCCCCCccCCCCCCCcceeeEEecCCCCCCC--cCCCCCceeecCCCceeecCCEEEEEEEeccccc
Q 039705 384 VVLPDGKILVAGSNPHSRYNLTSGSKYPTELRIEKFYPPYFDES--FASYRPSIVSKFKGKMLKYGQNFVIQFKLDELEV 461 (539)
Q Consensus 384 ~llpdG~V~v~GG~~~~~~~~~~~~~~p~~~~vE~y~Ppyl~~~--~~~~RP~i~~~~~p~~~~~g~~~~v~~~~~~~~~ 461 (539)
++++||+|||+||+.+..+. ++++++|+|+||||+++ ..+.||+|++++ |+.+.||++|+|+++.
T Consensus 517 ~ll~dg~v~v~GG~~~~~~~-------~~~~~~e~~~Ppyl~~~~~~~~~rP~i~~~~-~~~~~~g~~~~~~~~~----- 583 (656)
T 1k3i_A 517 LLLPDGRVFNGGGGLCGDCT-------TNHFDAQIFTPNYLYNSNGNLATRPKITRTS-TQSVKVGGRITISTDS----- 583 (656)
T ss_dssp EECTTSCEEEEECCCCTTCS-------CCCCEEEEEECGGGBCTTSSBCCCCCEEEES-CSEEETTCEEEEEESS-----
T ss_pred hcCCCcEEEecCCCCCCCCC-------CCeeEEEEEeChhhccCCCCcCCCCcccccC-CceecCCCEEEEEEec-----
Confidence 99999999999998876432 35789999999999863 567899999943 8999999999999863
Q ss_pred ccCcEEEEEEcCCccccccCCCceeEeccceeeeecCCceEEEEEEcCCCCCcCCCcceEEEEEc-CCCCCccEEEEeC
Q 039705 462 SLNDLKVTMYAPPFTTHGVSMGQRLLVPATKELIDVGSGIFQVSVMAPPTAKIAPPSFYLLFVVY-RQVPSPGTWVQIG 539 (539)
Q Consensus 462 ~~~~~~v~l~~~~~~TH~~n~~QR~~~L~~~~~~~~g~~~~~~~~~~P~~~~~~ppG~ymlf~~~-~gvPS~~~~v~i~ 539 (539)
.+.+|+|||++|+||++||+||+|+|+++. .|+ .+++|++|||++||||||||||||+ +||||+|+||+|.
T Consensus 584 --~~~~~~l~~~~~~th~~~~~qr~~~l~~~~---~~~--~~~~~~~p~~~~~~ppg~y~lf~~~~~g~ps~~~~v~~~ 655 (656)
T 1k3i_A 584 --SISKASLIRYGTATHTVNTDQRRIPLTLTN---NGG--NSYSFQVPSDSGVALPGYWMLFVMNSAGVPSVASTIRVT 655 (656)
T ss_dssp --CCSEEEEEECCEEETTBCSSCCEEECCEEE---EET--TEEEEECCSCTTTSCSEEEEEEEECTTSCBCCCEEEEEE
T ss_pred --cceEEEEEecCccccCcCCCCcEEecceEe---cCC--CEEEEECCCCCCcCCCcCeEEEEECCCCcccccEEEEEe
Confidence 367999999999999999999999999985 232 3678999999999999999999996 9999999999984
No 2
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=100.00 E-value=3.1e-36 Score=304.21 Aligned_cols=271 Identities=16% Similarity=0.206 Sum_probs=217.6
Q ss_pred CCCEEEEEccccCCCCCccCCCcccccCCCccccccccceeEEEEECCCCCEEeCccCCCcccccceecCCCcEEEecCC
Q 039705 41 NTNKAIMLDAVSLGPSNVRLPVGIYRLNPGAWQKYVDYRALAVEYDAESAAIRPLKILTDTWSSSGGLSANGTIVISGGW 120 (539)
Q Consensus 41 ~~gkv~~~g~~~~~~~~~~~~~g~~~~~~~~~~g~~~~~~~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~l~v~GG~ 120 (539)
.+++||++||.+. .. .....+||+.+++|+.++.++..++.++++..+++||++||.
T Consensus 14 ~~~~i~v~GG~~~--~~---------------------~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~ 70 (302)
T 2xn4_A 14 LPKLMVVVGGQAP--KA---------------------IRSVECYDFKEERWHQVAELPSRRCRAGMVYMAGLVFAVGGF 70 (302)
T ss_dssp -CEEEEEECCBSS--SB---------------------CCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEESCB
T ss_pred CCCEEEEECCCCC--CC---------------------CCcEEEEcCcCCcEeEcccCCcccccceEEEECCEEEEEeCc
Confidence 4789999999642 10 124779999999999999888888888888889999999997
Q ss_pred CC--CCCeEEEEeCCCCccceeecccccccccccceeEEccCCcEEEEcCccC----CeEEEE-ecCCCcceeeccCccc
Q 039705 121 SS--RGRSVRYLSGCYHACYWKEHHWELSAKRWFSTQHILPDGSFIVVGGRRE----FSYEYI-LKEGKRIIYDLPILNE 193 (539)
Q Consensus 121 ~~--g~~~v~~ydP~~~t~~W~~~~~~m~~~R~y~s~~~L~dG~VyvvGG~~~----~~~E~y-P~~~~~~w~~~~~l~~ 193 (539)
.. ..+++++||+. +++|+++++ |+.+|.+++++++ +++|||+||.+. .++|+| +.++ +|...+.++.
T Consensus 71 ~~~~~~~~~~~~d~~--~~~W~~~~~-~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~d~~~~--~W~~~~~~p~ 144 (302)
T 2xn4_A 71 NGSLRVRTVDSYDPV--KDQWTSVAN-MRDRRSTLGAAVL-NGLLYAVGGFDGSTGLSSVEAYNIKSN--EWFHVAPMNT 144 (302)
T ss_dssp CSSSBCCCEEEEETT--TTEEEEECC-CSSCCBSCEEEEE-TTEEEEEEEECSSCEEEEEEEEETTTT--EEEEECCCSS
T ss_pred CCCccccceEEECCC--CCceeeCCC-CCccccceEEEEE-CCEEEEEcCCCCCccCceEEEEeCCCC--eEeecCCCCC
Confidence 53 25789999999 999999997 9999999998888 899999999865 368999 8887 9976554433
Q ss_pred cCCCCCCCCcceEEEeeCCcEEEEEcC---------ceeEeeCCCCeEEEEcccCCCCCCccCCCccEEecccccCCCCC
Q 039705 194 TTNPSENNLYPFVFLSTDGNLFIFAND---------RSILLNPETNEILHVFPILRGGSRNYPASATSALLPIKLQDPNS 264 (539)
Q Consensus 194 ~~~~~~~~~yp~~~~~~~G~Iyv~Gg~---------~~e~yDp~tn~W~~~~p~mp~~~r~yp~~g~av~lpl~~~~~~~ 264 (539)
. .+.+++++.+++||++||. ++++||+.+++|+ .+++||. +|.. .+++.
T Consensus 145 ~-------r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~-~~~~~p~-~r~~---~~~~~---------- 202 (302)
T 2xn4_A 145 R-------RSSVGVGVVGGLLYAVGGYDVASRQCLSTVECYNATTNEWT-YIAEMST-RRSG---AGVGV---------- 202 (302)
T ss_dssp C-------CBSCEEEEETTEEEEECCEETTTTEECCCEEEEETTTTEEE-EECCCSS-CCBS---CEEEE----------
T ss_pred c-------ccCceEEEECCEEEEEeCCCCCCCccccEEEEEeCCCCcEE-ECCCCcc-cccc---ccEEE----------
Confidence 2 2335677789999999983 4789999999998 7889987 5653 23332
Q ss_pred CCcccEEEEecCCCCCcccccCCCcccccCCceEEEEeeCCCCceeee-ccCCCceeceeEEecCCcEEEEcCcCCCCCC
Q 039705 265 NAIRAEVLICGGAKPEAGVLAGKGEFMNALQDCGRIEITNKSATWQRE-MMPSPRVMGEMLLLPTGDVLIINGAKKGTAG 343 (539)
Q Consensus 265 ~~~~g~Iyv~GG~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~-~M~~~R~~~~~vvlpdG~I~vvGG~~~g~~g 343 (539)
++++||++||.+.. ..++++++||+. +++|+.. +|+.+|..+.++++ +++|||+||.+ +.
T Consensus 203 --~~~~iyv~GG~~~~-----------~~~~~~~~yd~~--~~~W~~~~~~~~~r~~~~~~~~-~~~i~v~GG~~-~~-- 263 (302)
T 2xn4_A 203 --LNNLLYAVGGHDGP-----------LVRKSVEVYDPT--TNAWRQVADMNMCRRNAGVCAV-NGLLYVVGGDD-GS-- 263 (302)
T ss_dssp --ETTEEEEECCBSSS-----------SBCCCEEEEETT--TTEEEEECCCSSCCBSCEEEEE-TTEEEEECCBC-SS--
T ss_pred --ECCEEEEECCCCCC-----------cccceEEEEeCC--CCCEeeCCCCCCccccCeEEEE-CCEEEEECCcC-CC--
Confidence 38999999997621 235789999986 5899997 99999999887665 99999999976 22
Q ss_pred cccCCCCCCccEEEcCCCCCCCceEecC-CCCCCccceeeEeeCCCCeE
Q 039705 344 WNFATDPNTTPVLYEPDDPINERFSELT-PTSKPRMCHSTSVVLPDGKI 391 (539)
Q Consensus 344 ~~~~~~~~~~~e~YdP~t~~g~~Wt~~a-~~~~~R~yhs~a~llpdG~V 391 (539)
....++++|||+++ +|+.++ +|+.+|.+|+++++ +++|
T Consensus 264 -----~~~~~v~~yd~~~~---~W~~~~~~~~~~r~~~~~~~~--~~~i 302 (302)
T 2xn4_A 264 -----CNLASVEYYNPTTD---KWTVVSSCMSTGRSYAGVTVI--DKRL 302 (302)
T ss_dssp -----SBCCCEEEEETTTT---EEEECSSCCSSCCBSCEEEEE--EC--
T ss_pred -----cccccEEEEcCCCC---eEEECCcccCcccccceEEEe--cccC
Confidence 12347999999999 999997 89999999999887 6664
No 3
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=100.00 E-value=8.3e-36 Score=302.62 Aligned_cols=278 Identities=16% Similarity=0.151 Sum_probs=219.0
Q ss_pred CcccceEEEecCCCCEEEEEccccCCCCCccCCCcccccCCCccccccccceeEEEEECCCCCEEeCccCCCccccccee
Q 039705 29 SGISAMHIILFPNTNKAIMLDAVSLGPSNVRLPVGIYRLNPGAWQKYVDYRALAVEYDAESAAIRPLKILTDTWSSSGGL 108 (539)
Q Consensus 29 ~~~~~~~~~ll~~~gkv~~~g~~~~~~~~~~~~~g~~~~~~~~~~g~~~~~~~~~~yDp~t~~w~~l~~~~~~~c~~~~~ 108 (539)
.+.+.-|.++. .+++||++||.. +. ......+||+.+++|+.++.++..++..+++
T Consensus 12 ~~~~~~~~~~~-~~~~i~v~GG~~-~~----------------------~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~ 67 (308)
T 1zgk_A 12 GLVPRGSHAPK-VGRLIYTAGGYF-RQ----------------------SLSYLEAYNPSNGTWLRLADLQVPRSGLAGC 67 (308)
T ss_dssp ---------CC-CCCCEEEECCBS-SS----------------------BCCCEEEEETTTTEEEECCCCSSCCBSCEEE
T ss_pred CeeeCCccccC-CCCEEEEEeCcC-CC----------------------CcceEEEEcCCCCeEeECCCCCcccccceEE
Confidence 44556677777 899999999962 11 0234789999999999999888888877888
Q ss_pred cCCCcEEEecCC----CC--CCCeEEEEeCCCCccceeecccccccccccceeEEccCCcEEEEcCccC----CeEEEE-
Q 039705 109 SANGTIVISGGW----SS--RGRSVRYLSGCYHACYWKEHHWELSAKRWFSTQHILPDGSFIVVGGRRE----FSYEYI- 177 (539)
Q Consensus 109 l~dG~l~v~GG~----~~--g~~~v~~ydP~~~t~~W~~~~~~m~~~R~y~s~~~L~dG~VyvvGG~~~----~~~E~y- 177 (539)
+.+++||++||. .. ..+++++||+. +++|+++++ |+.+|.+++++++ +|+|||+||.+. ..+|+|
T Consensus 68 ~~~~~lyv~GG~~~~~~~~~~~~~~~~~d~~--~~~W~~~~~-~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd 143 (308)
T 1zgk_A 68 VVGGLLYAVGGRNNSPDGNTDSSALDCYNPM--TNQWSPCAP-MSVPRNRIGVGVI-DGHIYAVGGSHGCIHHNSVERYE 143 (308)
T ss_dssp EETTEEEEECCEEEETTEEEECCCEEEEETT--TTEEEECCC-CSSCCBTCEEEEE-TTEEEEECCEETTEECCCEEEEE
T ss_pred EECCEEEEECCCcCCCCCCeecceEEEECCC--CCeEeECCC-CCcCccccEEEEE-CCEEEEEcCCCCCcccccEEEEC
Confidence 889999999997 31 25789999999 999999997 9999999998888 899999999764 468999
Q ss_pred ecCCCcceeeccCccccCCCCCCCCcceEEEeeCCcEEEEEcC-------ceeEeeCCCCeEEEEcccCCCCCCccCCCc
Q 039705 178 LKEGKRIIYDLPILNETTNPSENNLYPFVFLSTDGNLFIFAND-------RSILLNPETNEILHVFPILRGGSRNYPASA 250 (539)
Q Consensus 178 P~~~~~~w~~~~~l~~~~~~~~~~~yp~~~~~~~G~Iyv~Gg~-------~~e~yDp~tn~W~~~~p~mp~~~r~yp~~g 250 (539)
+.++ +|...+.++.. .+.++.++.+++||++||. ++++||+.+++|+ .+++||. +|.. .
T Consensus 144 ~~~~--~W~~~~~~p~~-------r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~-~~~~~p~-~r~~---~ 209 (308)
T 1zgk_A 144 PERD--EWHLVAPMLTR-------RIGVGVAVLNRLLYAVGGFDGTNRLNSAECYYPERNEWR-MITAMNT-IRSG---A 209 (308)
T ss_dssp TTTT--EEEECCCCSSC-------CBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTTTEEE-ECCCCSS-CCBS---C
T ss_pred CCCC--eEeECCCCCcc-------ccceEEEEECCEEEEEeCCCCCCcCceEEEEeCCCCeEe-eCCCCCC-cccc---c
Confidence 8887 99866544332 2335677789999999983 5899999999998 7899987 5653 2
Q ss_pred cEEecccccCCCCCCCcccEEEEecCCCCCcccccCCCcccccCCceEEEEeeCCCCceeee-ccCCCceeceeEEecCC
Q 039705 251 TSALLPIKLQDPNSNAIRAEVLICGGAKPEAGVLAGKGEFMNALQDCGRIEITNKSATWQRE-MMPSPRVMGEMLLLPTG 329 (539)
Q Consensus 251 ~av~lpl~~~~~~~~~~~g~Iyv~GG~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~-~M~~~R~~~~~vvlpdG 329 (539)
+++. ++++||++||.+.. ..++++++||+. +++|+.. +|+.+|..++++++ ++
T Consensus 210 ~~~~------------~~~~iyv~GG~~~~-----------~~~~~v~~yd~~--~~~W~~~~~~p~~r~~~~~~~~-~~ 263 (308)
T 1zgk_A 210 GVCV------------LHNCIYAAGGYDGQ-----------DQLNSVERYDVE--TETWTFVAPMKHRRSALGITVH-QG 263 (308)
T ss_dssp EEEE------------ETTEEEEECCBCSS-----------SBCCCEEEEETT--TTEEEECCCCSSCCBSCEEEEE-TT
T ss_pred eEEE------------ECCEEEEEeCCCCC-----------CccceEEEEeCC--CCcEEECCCCCCCccceEEEEE-CC
Confidence 3333 38999999997621 236789999986 5899997 99999999987766 99
Q ss_pred cEEEEcCcCCCCCCcccCCCCCCccEEEcCCCCCCCceEecCCCCCCccceeeEee
Q 039705 330 DVLIINGAKKGTAGWNFATDPNTTPVLYEPDDPINERFSELTPTSKPRMCHSTSVV 385 (539)
Q Consensus 330 ~I~vvGG~~~g~~g~~~~~~~~~~~e~YdP~t~~g~~Wt~~a~~~~~R~yhs~a~l 385 (539)
+|||+||.+ +. ....++++|||+++ +|+.+++|+.+|.+|++++|
T Consensus 264 ~i~v~GG~~-~~-------~~~~~v~~yd~~~~---~W~~~~~~p~~r~~~~~~~l 308 (308)
T 1zgk_A 264 RIYVLGGYD-GH-------TFLDSVECYDPDTD---TWSEVTRMTSGRSGVGVAVT 308 (308)
T ss_dssp EEEEECCBC-SS-------CBCCEEEEEETTTT---EEEEEEECSSCCBSCEEEEC
T ss_pred EEEEEcCcC-CC-------cccceEEEEcCCCC---EEeecCCCCCCcccceeEeC
Confidence 999999976 21 12347999999999 99999999999999998764
No 4
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=100.00 E-value=8.1e-35 Score=294.38 Aligned_cols=265 Identities=11% Similarity=0.143 Sum_probs=216.8
Q ss_pred CCEEEEEccccCCCCCccCCCcccccCCCccccccccceeEEEEECCCCCEEeCccCCCcccccceecCCCcEEEecCCC
Q 039705 42 TNKAIMLDAVSLGPSNVRLPVGIYRLNPGAWQKYVDYRALAVEYDAESAAIRPLKILTDTWSSSGGLSANGTIVISGGWS 121 (539)
Q Consensus 42 ~gkv~~~g~~~~~~~~~~~~~g~~~~~~~~~~g~~~~~~~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~l~v~GG~~ 121 (539)
.+++|++||... .....+||+.+++|+.++.++..++.+++++.+++||++||..
T Consensus 11 ~~~l~~~GG~~~-------------------------~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~ 65 (306)
T 3ii7_A 11 HDYRIALFGGSQ-------------------------PQSCRYFNPKDYSWTDIRCPFEKRRDAACVFWDNVVYILGGSQ 65 (306)
T ss_dssp CCEEEEEECCSS-------------------------TTSEEEEETTTTEEEECCCCSCCCBSCEEEEETTEEEEECCBS
T ss_pred cceEEEEeCCCC-------------------------CceEEEecCCCCCEecCCCCCcccceeEEEEECCEEEEEeCCC
Confidence 478999999641 1136789999999999999988888888889999999999975
Q ss_pred -CCCCeEEEEeCCCCccceeecccccccccccceeEEccCCcEEEEcCcc-C----CeEEEE-ecCCCcceeeccCcccc
Q 039705 122 -SRGRSVRYLSGCYHACYWKEHHWELSAKRWFSTQHILPDGSFIVVGGRR-E----FSYEYI-LKEGKRIIYDLPILNET 194 (539)
Q Consensus 122 -~g~~~v~~ydP~~~t~~W~~~~~~m~~~R~y~s~~~L~dG~VyvvGG~~-~----~~~E~y-P~~~~~~w~~~~~l~~~ 194 (539)
...+++++|||. +++|+.+++ |+.+|..++++++ +++|||+||.+ . .++++| +.++ +|...+.++..
T Consensus 66 ~~~~~~~~~~d~~--~~~W~~~~~-~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~d~~~~--~W~~~~~~p~~ 139 (306)
T 3ii7_A 66 LFPIKRMDCYNVV--KDSWYSKLG-PPTPRDSLAACAA-EGKIYTSGGSEVGNSALYLFECYDTRTE--SWHTKPSMLTQ 139 (306)
T ss_dssp SSBCCEEEEEETT--TTEEEEEEC-CSSCCBSCEEEEE-TTEEEEECCBBTTBSCCCCEEEEETTTT--EEEEECCCSSC
T ss_pred CCCcceEEEEeCC--CCeEEECCC-CCccccceeEEEE-CCEEEEECCCCCCCcEeeeEEEEeCCCC--ceEeCCCCcCC
Confidence 236889999999 999999987 9999999998888 89999999986 2 468999 8887 99765544332
Q ss_pred CCCCCCCCcceEEEeeCCcEEEEEcC-----------ceeEeeCCCCeEEEEcccCCCCCCccCCCccEEecccccCCCC
Q 039705 195 TNPSENNLYPFVFLSTDGNLFIFAND-----------RSILLNPETNEILHVFPILRGGSRNYPASATSALLPIKLQDPN 263 (539)
Q Consensus 195 ~~~~~~~~yp~~~~~~~G~Iyv~Gg~-----------~~e~yDp~tn~W~~~~p~mp~~~r~yp~~g~av~lpl~~~~~~ 263 (539)
.+-+..+..+++||++||. ++++||+.+++|+ .+++||. +|.. .+++.
T Consensus 140 -------r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~-~~~~~p~-~r~~---~~~~~--------- 198 (306)
T 3ii7_A 140 -------RCSHGMVEANGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWT-ELCPMIE-ARKN---HGLVF--------- 198 (306)
T ss_dssp -------CBSCEEEEETTEEEEECCEESCTTTCEECCCEEEEETTTTEEE-EECCCSS-CCBS---CEEEE---------
T ss_pred -------cceeEEEEECCEEEEECCCCCCCCcccccceEEEeCCCCCeEE-ECCCccc-hhhc---ceEEE---------
Confidence 2335677789999999982 3789999999998 7889987 5553 23333
Q ss_pred CCCcccEEEEecCCCCCcccccCCCcccccCCceEEEEeeCCCCceeee-ccCCCceeceeEEecCCcEEEEcCcCCCCC
Q 039705 264 SNAIRAEVLICGGAKPEAGVLAGKGEFMNALQDCGRIEITNKSATWQRE-MMPSPRVMGEMLLLPTGDVLIINGAKKGTA 342 (539)
Q Consensus 264 ~~~~~g~Iyv~GG~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~-~M~~~R~~~~~vvlpdG~I~vvGG~~~g~~ 342 (539)
++++||++||.+.. ..++++++||+. +++|+.. +|+.+|..+.++++ +++|||+||.+ +.
T Consensus 199 ---~~~~i~v~GG~~~~-----------~~~~~~~~yd~~--~~~W~~~~~~p~~r~~~~~~~~-~~~i~v~GG~~-~~- 259 (306)
T 3ii7_A 199 ---VKDKIFAVGGQNGL-----------GGLDNVEYYDIK--LNEWKMVSPMPWKGVTVKCAAV-GSIVYVLAGFQ-GV- 259 (306)
T ss_dssp ---ETTEEEEECCEETT-----------EEBCCEEEEETT--TTEEEECCCCSCCBSCCEEEEE-TTEEEEEECBC-SS-
T ss_pred ---ECCEEEEEeCCCCC-----------CCCceEEEeeCC--CCcEEECCCCCCCccceeEEEE-CCEEEEEeCcC-CC-
Confidence 38999999997521 236789999986 5899998 99999999987766 99999999986 22
Q ss_pred CcccCCCCCCccEEEcCCCCCCCceEecCCCCCCccceeeEeeC
Q 039705 343 GWNFATDPNTTPVLYEPDDPINERFSELTPTSKPRMCHSTSVVL 386 (539)
Q Consensus 343 g~~~~~~~~~~~e~YdP~t~~g~~Wt~~a~~~~~R~yhs~a~ll 386 (539)
....++++|||+++ +|+.+++|+.+|.+|+++++.
T Consensus 260 ------~~~~~~~~yd~~~~---~W~~~~~~~~~r~~~~~~~~~ 294 (306)
T 3ii7_A 260 ------GRLGHILEYNTETD---KWVANSKVRAFPVTSCLICVV 294 (306)
T ss_dssp ------SBCCEEEEEETTTT---EEEEEEEEECCSCTTCEEEEE
T ss_pred ------eeeeeEEEEcCCCC---eEEeCCCcccccceeEEEEEC
Confidence 12347899999999 999999999999999988874
No 5
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=100.00 E-value=1.9e-34 Score=290.72 Aligned_cols=269 Identities=18% Similarity=0.205 Sum_probs=216.0
Q ss_pred CCCEEEEEccccCCCCCccCCCcccccCCCccccccccceeEEEEECCCCCEEeCccCCCcccccceecCCCcEEEecCC
Q 039705 41 NTNKAIMLDAVSLGPSNVRLPVGIYRLNPGAWQKYVDYRALAVEYDAESAAIRPLKILTDTWSSSGGLSANGTIVISGGW 120 (539)
Q Consensus 41 ~~gkv~~~g~~~~~~~~~~~~~g~~~~~~~~~~g~~~~~~~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~l~v~GG~ 120 (539)
.+++||++||...+.. ......+||+.+++|+.++.++..++.++++..+++||++||.
T Consensus 13 ~~~~i~~~GG~~~~~~---------------------~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~l~v~GG~ 71 (301)
T 2vpj_A 13 ANEVLLVVGGFGSQQS---------------------PIDVVEKYDPKTQEWSFLPSITRKRRYVASVSLHDRIYVIGGY 71 (301)
T ss_dssp CCEEEEEECCEETTTE---------------------ECCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCB
T ss_pred CCCEEEEEeCccCCCc---------------------ceeEEEEEcCCCCeEEeCCCCChhhccccEEEECCEEEEEcCC
Confidence 4789999999432110 1235789999999999999888888888888899999999997
Q ss_pred CC--CCCeEEEEeCCCCccc---eeecccccccccccceeEEccCCcEEEEcCccC----CeEEEE-ecCCCcceeeccC
Q 039705 121 SS--RGRSVRYLSGCYHACY---WKEHHWELSAKRWFSTQHILPDGSFIVVGGRRE----FSYEYI-LKEGKRIIYDLPI 190 (539)
Q Consensus 121 ~~--g~~~v~~ydP~~~t~~---W~~~~~~m~~~R~y~s~~~L~dG~VyvvGG~~~----~~~E~y-P~~~~~~w~~~~~ 190 (539)
.. ..+++++||+. +++ |+.+++ |+.+|.+++++++ +++|||+||.+. .++|+| +.++ +|...+.
T Consensus 72 ~~~~~~~~~~~~d~~--~~~~~~W~~~~~-~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~d~~~~--~W~~~~~ 145 (301)
T 2vpj_A 72 DGRSRLSSVECLDYT--ADEDGVWYSVAP-MNVRRGLAGATTL-GDMIYVSGGFDGSRRHTSMERYDPNID--QWSMLGD 145 (301)
T ss_dssp CSSCBCCCEEEEETT--CCTTCCCEEECC-CSSCCBSCEEEEE-TTEEEEECCBCSSCBCCEEEEEETTTT--EEEEEEE
T ss_pred CCCccCceEEEEECC--CCCCCeeEECCC-CCCCccceeEEEE-CCEEEEEcccCCCcccceEEEEcCCCC--eEEECCC
Confidence 53 25789999999 899 999987 9999999998888 899999999864 468999 8887 9975543
Q ss_pred ccccCCCCCCCCcceEEEeeCCcEEEEEcC-------ceeEeeCCCCeEEEEcccCCCCCCccCCCccEEecccccCCCC
Q 039705 191 LNETTNPSENNLYPFVFLSTDGNLFIFAND-------RSILLNPETNEILHVFPILRGGSRNYPASATSALLPIKLQDPN 263 (539)
Q Consensus 191 l~~~~~~~~~~~yp~~~~~~~G~Iyv~Gg~-------~~e~yDp~tn~W~~~~p~mp~~~r~yp~~g~av~lpl~~~~~~ 263 (539)
++.. .+.+..+..+++||++||. ++++||+.+++|+ .+++||. +|.. .+++.
T Consensus 146 ~p~~-------r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~-~~~~~p~-~r~~---~~~~~--------- 204 (301)
T 2vpj_A 146 MQTA-------REGAGLVVASGVIYCLGGYDGLNILNSVEKYDPHTGHWT-NVTPMAT-KRSG---AGVAL--------- 204 (301)
T ss_dssp CSSC-------CBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTTTEEE-EECCCSS-CCBS---CEEEE---------
T ss_pred CCCC-------cccceEEEECCEEEEECCCCCCcccceEEEEeCCCCcEE-eCCCCCc-cccc---ceEEE---------
Confidence 3322 2335677789999999983 5899999999998 7888987 5552 23332
Q ss_pred CCCcccEEEEecCCCCCcccccCCCcccccCCceEEEEeeCCCCceeee-ccCCCceeceeEEecCCcEEEEcCcCCCCC
Q 039705 264 SNAIRAEVLICGGAKPEAGVLAGKGEFMNALQDCGRIEITNKSATWQRE-MMPSPRVMGEMLLLPTGDVLIINGAKKGTA 342 (539)
Q Consensus 264 ~~~~~g~Iyv~GG~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~-~M~~~R~~~~~vvlpdG~I~vvGG~~~g~~ 342 (539)
.+++||++||.+.. ..++++++||+. +++|+.. +|+.+|..+.++++ +++|||+||.+ +.
T Consensus 205 ---~~~~i~v~GG~~~~-----------~~~~~v~~yd~~--~~~W~~~~~~p~~r~~~~~~~~-~~~i~v~GG~~-~~- 265 (301)
T 2vpj_A 205 ---LNDHIYVVGGFDGT-----------AHLSSVEAYNIR--TDSWTTVTSMTTPRCYVGATVL-RGRLYAIAGYD-GN- 265 (301)
T ss_dssp ---ETTEEEEECCBCSS-----------SBCCCEEEEETT--TTEEEEECCCSSCCBSCEEEEE-TTEEEEECCBC-SS-
T ss_pred ---ECCEEEEEeCCCCC-----------cccceEEEEeCC--CCcEEECCCCCCcccceeEEEE-CCEEEEEcCcC-CC-
Confidence 38899999997621 136789999986 5899997 89999999987766 99999999976 21
Q ss_pred CcccCCCCCCccEEEcCCCCCCCceEecCCCCCCccceeeEee
Q 039705 343 GWNFATDPNTTPVLYEPDDPINERFSELTPTSKPRMCHSTSVV 385 (539)
Q Consensus 343 g~~~~~~~~~~~e~YdP~t~~g~~Wt~~a~~~~~R~yhs~a~l 385 (539)
....++++|||+++ +|+.+++|+.+|..|+++++
T Consensus 266 ------~~~~~v~~yd~~~~---~W~~~~~~~~~r~~~~~~~~ 299 (301)
T 2vpj_A 266 ------SLLSSIECYDPIID---SWEVVTSMGTQRCDAGVCVL 299 (301)
T ss_dssp ------SBEEEEEEEETTTT---EEEEEEEEEEEEESCEEEEE
T ss_pred ------cccccEEEEcCCCC---eEEEcCCCCcccccceEEEe
Confidence 12347899999999 99999999999999988776
No 6
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=100.00 E-value=3.5e-33 Score=283.25 Aligned_cols=257 Identities=16% Similarity=0.161 Sum_probs=202.8
Q ss_pred cccccceecCCCcEEEecCCC-CCCCeEEEEeCCCCccceeecccccccccccceeEEccCCcEEEEcCc----cC----
Q 039705 101 TWSSSGGLSANGTIVISGGWS-SRGRSVRYLSGCYHACYWKEHHWELSAKRWFSTQHILPDGSFIVVGGR----RE---- 171 (539)
Q Consensus 101 ~~c~~~~~l~dG~l~v~GG~~-~g~~~v~~ydP~~~t~~W~~~~~~m~~~R~y~s~~~L~dG~VyvvGG~----~~---- 171 (539)
.++...++..+++||++||.. ...+++++|||. +++|+.+++ |+.+|.+++++++ +++||++||. +.
T Consensus 14 ~~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~d~~--~~~W~~~~~-~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~ 89 (308)
T 1zgk_A 14 VPRGSHAPKVGRLIYTAGGYFRQSLSYLEAYNPS--NGTWLRLAD-LQVPRSGLAGCVV-GGLLYAVGGRNNSPDGNTDS 89 (308)
T ss_dssp -------CCCCCCEEEECCBSSSBCCCEEEEETT--TTEEEECCC-CSSCCBSCEEEEE-TTEEEEECCEEEETTEEEEC
T ss_pred eeCCccccCCCCEEEEEeCcCCCCcceEEEEcCC--CCeEeECCC-CCcccccceEEEE-CCEEEEECCCcCCCCCCeec
Confidence 345556667899999999973 236789999999 999999987 9999999988877 8999999998 32
Q ss_pred CeEEEE-ecCCCcceeeccCccccCCCCCCCCcceEEEeeCCcEEEEEc-------CceeEeeCCCCeEEEEcccCCCCC
Q 039705 172 FSYEYI-LKEGKRIIYDLPILNETTNPSENNLYPFVFLSTDGNLFIFAN-------DRSILLNPETNEILHVFPILRGGS 243 (539)
Q Consensus 172 ~~~E~y-P~~~~~~w~~~~~l~~~~~~~~~~~yp~~~~~~~G~Iyv~Gg-------~~~e~yDp~tn~W~~~~p~mp~~~ 243 (539)
..+++| +.++ +|...+.++.. .+-+.+++.+|+||++|| +++++||+.+++|+ .+++||. +
T Consensus 90 ~~~~~~d~~~~--~W~~~~~~p~~-------r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~-~~~~~p~-~ 158 (308)
T 1zgk_A 90 SALDCYNPMTN--QWSPCAPMSVP-------RNRIGVGVIDGHIYAVGGSHGCIHHNSVERYEPERDEWH-LVAPMLT-R 158 (308)
T ss_dssp CCEEEEETTTT--EEEECCCCSSC-------CBTCEEEEETTEEEEECCEETTEECCCEEEEETTTTEEE-ECCCCSS-C
T ss_pred ceEEEECCCCC--eEeECCCCCcC-------ccccEEEEECCEEEEEcCCCCCcccccEEEECCCCCeEe-ECCCCCc-c
Confidence 468899 8887 99866544332 233567778999999999 46899999999998 7999987 5
Q ss_pred CccCCCccEEecccccCCCCCCCcccEEEEecCCCCCcccccCCCcccccCCceEEEEeeCCCCceeee-ccCCCceece
Q 039705 244 RNYPASATSALLPIKLQDPNSNAIRAEVLICGGAKPEAGVLAGKGEFMNALQDCGRIEITNKSATWQRE-MMPSPRVMGE 322 (539)
Q Consensus 244 r~yp~~g~av~lpl~~~~~~~~~~~g~Iyv~GG~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~-~M~~~R~~~~ 322 (539)
|.. .++++ ++++||++||.+.. ..++++++||+. +++|+.. +|+.+|..++
T Consensus 159 r~~---~~~~~------------~~~~iyv~GG~~~~-----------~~~~~~~~yd~~--~~~W~~~~~~p~~r~~~~ 210 (308)
T 1zgk_A 159 RIG---VGVAV------------LNRLLYAVGGFDGT-----------NRLNSAECYYPE--RNEWRMITAMNTIRSGAG 210 (308)
T ss_dssp CBS---CEEEE------------ETTEEEEECCBCSS-----------CBCCCEEEEETT--TTEEEECCCCSSCCBSCE
T ss_pred ccc---eEEEE------------ECCEEEEEeCCCCC-----------CcCceEEEEeCC--CCeEeeCCCCCCccccce
Confidence 553 23333 38999999997621 136789999986 6999997 9999999998
Q ss_pred eEEecCCcEEEEcCcCCCCCCcccCCCCCCccEEEcCCCCCCCceEecCCCCCCccceeeEeeCCCCeEEEecCCCCCCC
Q 039705 323 MLLLPTGDVLIINGAKKGTAGWNFATDPNTTPVLYEPDDPINERFSELTPTSKPRMCHSTSVVLPDGKILVAGSNPHSRY 402 (539)
Q Consensus 323 ~vvlpdG~I~vvGG~~~g~~g~~~~~~~~~~~e~YdP~t~~g~~Wt~~a~~~~~R~yhs~a~llpdG~V~v~GG~~~~~~ 402 (539)
++++ +++|||+||.+ +. ....++++|||+++ +|+.+++|+.+|..|+++++ +++|||+||.....
T Consensus 211 ~~~~-~~~iyv~GG~~-~~-------~~~~~v~~yd~~~~---~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~- 275 (308)
T 1zgk_A 211 VCVL-HNCIYAAGGYD-GQ-------DQLNSVERYDVETE---TWTFVAPMKHRRSALGITVH--QGRIYVLGGYDGHT- 275 (308)
T ss_dssp EEEE-TTEEEEECCBC-SS-------SBCCCEEEEETTTT---EEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSC-
T ss_pred EEEE-CCEEEEEeCCC-CC-------CccceEEEEeCCCC---cEEECCCCCCCccceEEEEE--CCEEEEEcCcCCCc-
Confidence 7766 99999999986 22 12347999999999 99999999999999998887 99999999964431
Q ss_pred ccCCCCCCCcceeeEEecCCCC
Q 039705 403 NLTSGSKYPTELRIEKFYPPYF 424 (539)
Q Consensus 403 ~~~~~~~~p~~~~vE~y~Ppyl 424 (539)
+ ..++|+|+|..-
T Consensus 276 -------~--~~~v~~yd~~~~ 288 (308)
T 1zgk_A 276 -------F--LDSVECYDPDTD 288 (308)
T ss_dssp -------B--CCEEEEEETTTT
T ss_pred -------c--cceEEEEcCCCC
Confidence 1 358999999864
No 7
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=100.00 E-value=5.4e-33 Score=280.45 Aligned_cols=251 Identities=16% Similarity=0.183 Sum_probs=200.3
Q ss_pred cCCCcEEEecCCCC-CCCeEEEEeCCCCccceeecccccccccccceeEEccCCcEEEEcCccC----CeEEEE-ecCCC
Q 039705 109 SANGTIVISGGWSS-RGRSVRYLSGCYHACYWKEHHWELSAKRWFSTQHILPDGSFIVVGGRRE----FSYEYI-LKEGK 182 (539)
Q Consensus 109 l~dG~l~v~GG~~~-g~~~v~~ydP~~~t~~W~~~~~~m~~~R~y~s~~~L~dG~VyvvGG~~~----~~~E~y-P~~~~ 182 (539)
..+++||++||... ..+++++||+. +++|..+++ |+.+|.+++++++ +++|||+||.+. .++++| +.++
T Consensus 13 ~~~~~i~v~GG~~~~~~~~~~~~d~~--~~~W~~~~~-~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~d~~~~- 87 (302)
T 2xn4_A 13 NLPKLMVVVGGQAPKAIRSVECYDFK--EERWHQVAE-LPSRRCRAGMVYM-AGLVFAVGGFNGSLRVRTVDSYDPVKD- 87 (302)
T ss_dssp --CEEEEEECCBSSSBCCCEEEEETT--TTEEEEECC-CSSCCBSCEEEEE-TTEEEEESCBCSSSBCCCEEEEETTTT-
T ss_pred CCCCEEEEECCCCCCCCCcEEEEcCc--CCcEeEccc-CCcccccceEEEE-CCEEEEEeCcCCCccccceEEECCCCC-
Confidence 35789999999753 36789999999 999999986 9999999988877 899999999764 468999 8887
Q ss_pred cceeeccCccccCCCCCCCCcceEEEeeCCcEEEEEcC-------ceeEeeCCCCeEEEEcccCCCCCCccCCCccEEec
Q 039705 183 RIIYDLPILNETTNPSENNLYPFVFLSTDGNLFIFAND-------RSILLNPETNEILHVFPILRGGSRNYPASATSALL 255 (539)
Q Consensus 183 ~~w~~~~~l~~~~~~~~~~~yp~~~~~~~G~Iyv~Gg~-------~~e~yDp~tn~W~~~~p~mp~~~r~yp~~g~av~l 255 (539)
+|...+.++.. .+.|.+++.+++||++||. ++++||+.+++|+ .+++||. +|.. .+++.
T Consensus 88 -~W~~~~~~p~~-------r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~-~~~~~p~-~r~~---~~~~~- 153 (302)
T 2xn4_A 88 -QWTSVANMRDR-------RSTLGAAVLNGLLYAVGGFDGSTGLSSVEAYNIKSNEWF-HVAPMNT-RRSS---VGVGV- 153 (302)
T ss_dssp -EEEEECCCSSC-------CBSCEEEEETTEEEEEEEECSSCEEEEEEEEETTTTEEE-EECCCSS-CCBS---CEEEE-
T ss_pred -ceeeCCCCCcc-------ccceEEEEECCEEEEEcCCCCCccCceEEEEeCCCCeEe-ecCCCCC-cccC---ceEEE-
Confidence 99866544332 2336677889999999993 5899999999998 7899987 5653 23332
Q ss_pred ccccCCCCCCCcccEEEEecCCCCCcccccCCCcccccCCceEEEEeeCCCCceeee-ccCCCceeceeEEecCCcEEEE
Q 039705 256 PIKLQDPNSNAIRAEVLICGGAKPEAGVLAGKGEFMNALQDCGRIEITNKSATWQRE-MMPSPRVMGEMLLLPTGDVLII 334 (539)
Q Consensus 256 pl~~~~~~~~~~~g~Iyv~GG~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~-~M~~~R~~~~~vvlpdG~I~vv 334 (539)
++++||++||.+.... ..++++++||+. +++|+.. +|+.+|..++++++ +++|||+
T Consensus 154 -----------~~~~iyv~GG~~~~~~---------~~~~~~~~yd~~--~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~ 210 (302)
T 2xn4_A 154 -----------VGGLLYAVGGYDVASR---------QCLSTVECYNAT--TNEWTYIAEMSTRRSGAGVGVL-NNLLYAV 210 (302)
T ss_dssp -----------ETTEEEEECCEETTTT---------EECCCEEEEETT--TTEEEEECCCSSCCBSCEEEEE-TTEEEEE
T ss_pred -----------ECCEEEEEeCCCCCCC---------ccccEEEEEeCC--CCcEEECCCCccccccccEEEE-CCEEEEE
Confidence 3899999999752110 236789999986 6999997 99999999987765 9999999
Q ss_pred cCcCCCCCCcccCCCCCCccEEEcCCCCCCCceEecCCCCCCccceeeEeeCCCCeEEEecCCCCCCCccCCCCCCCcce
Q 039705 335 NGAKKGTAGWNFATDPNTTPVLYEPDDPINERFSELTPTSKPRMCHSTSVVLPDGKILVAGSNPHSRYNLTSGSKYPTEL 414 (539)
Q Consensus 335 GG~~~g~~g~~~~~~~~~~~e~YdP~t~~g~~Wt~~a~~~~~R~yhs~a~llpdG~V~v~GG~~~~~~~~~~~~~~p~~~ 414 (539)
||.+ +. ....++++|||+++ +|+.+++|+.+|..|+++++ +++||++||..... ...
T Consensus 211 GG~~-~~-------~~~~~~~~yd~~~~---~W~~~~~~~~~r~~~~~~~~--~~~i~v~GG~~~~~----------~~~ 267 (302)
T 2xn4_A 211 GGHD-GP-------LVRKSVEVYDPTTN---AWRQVADMNMCRRNAGVCAV--NGLLYVVGGDDGSC----------NLA 267 (302)
T ss_dssp CCBS-SS-------SBCCCEEEEETTTT---EEEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSS----------BCC
T ss_pred CCCC-CC-------cccceEEEEeCCCC---CEeeCCCCCCccccCeEEEE--CCEEEEECCcCCCc----------ccc
Confidence 9976 22 12347999999999 99999999999999998877 99999999964331 135
Q ss_pred eeEEecCCCC
Q 039705 415 RIEKFYPPYF 424 (539)
Q Consensus 415 ~vE~y~Ppyl 424 (539)
++|+|+|..-
T Consensus 268 ~v~~yd~~~~ 277 (302)
T 2xn4_A 268 SVEYYNPTTD 277 (302)
T ss_dssp CEEEEETTTT
T ss_pred cEEEEcCCCC
Confidence 7999999864
No 8
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=100.00 E-value=2.9e-33 Score=284.97 Aligned_cols=263 Identities=16% Similarity=0.223 Sum_probs=202.4
Q ss_pred EEEEECCCCCEEeCccC-CCcccccceecCCCcEEEecCCC---CC-----CCeEEEEeCCCCccceeeccccccccccc
Q 039705 82 AVEYDAESAAIRPLKIL-TDTWSSSGGLSANGTIVISGGWS---SR-----GRSVRYLSGCYHACYWKEHHWELSAKRWF 152 (539)
Q Consensus 82 ~~~yDp~t~~w~~l~~~-~~~~c~~~~~l~dG~l~v~GG~~---~g-----~~~v~~ydP~~~t~~W~~~~~~m~~~R~y 152 (539)
..+|||.+++|...+.. +..++.+++++.+++||++||.. ++ .+.+++|||. +++|+++++ |+.+|..
T Consensus 26 ~~~yd~~~~~W~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~--~~~W~~~~~-~p~~r~~ 102 (318)
T 2woz_A 26 AVAYDPMENECYLTALAEQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNV--SSEWVGLPP-LPSARCL 102 (318)
T ss_dssp EEEEETTTTEEEEEEECTTSCSSEEEEECSSSCEEEEESSCC-------CCCBEEEEEETT--TTEEEECSC-BSSCBCS
T ss_pred eEEECCCCCceecccCCccCCccceEEEEECCEEEEECCcccCccccCCCccccEEEEeCC--CCcEEECCC-CCccccc
Confidence 56899999999984432 24567777888999999999952 11 2348999999 999999987 9999999
Q ss_pred ceeEEccCCcEEEEcCccC------CeEEEE-ecCCCcceeeccCccccCCCCCCCCcceEEEeeCCcEEEEEcC-----
Q 039705 153 STQHILPDGSFIVVGGRRE------FSYEYI-LKEGKRIIYDLPILNETTNPSENNLYPFVFLSTDGNLFIFAND----- 220 (539)
Q Consensus 153 ~s~~~L~dG~VyvvGG~~~------~~~E~y-P~~~~~~w~~~~~l~~~~~~~~~~~yp~~~~~~~G~Iyv~Gg~----- 220 (539)
++++++ +++|||+||.+. .++++| +.++ +|...+.++.. .+-|.+++.+|+||++||.
T Consensus 103 ~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~yd~~~~--~W~~~~~~p~~-------r~~~~~~~~~~~iyv~GG~~~~~~ 172 (318)
T 2woz_A 103 FGLGEV-DDKIYVVAGKDLQTEASLDSVLCYDPVAA--KWSEVKNLPIK-------VYGHNVISHNGMIYCLGGKTDDKK 172 (318)
T ss_dssp CEEEEE-TTEEEEEEEEBTTTCCEEEEEEEEETTTT--EEEEECCCSSC-------EESCEEEEETTEEEEECCEESSSC
T ss_pred cceEEE-CCEEEEEcCccCCCCcccceEEEEeCCCC--CEeECCCCCCc-------ccccEEEEECCEEEEEcCCCCCCC
Confidence 988888 899999999852 358999 8887 99765433322 2336677799999999983
Q ss_pred ---ceeEeeCCCCeEEEEcccCCCCCCccCCCccEEecccccCCCCCCCcccEEEEecCCCCCcccccCCCcccccCCce
Q 039705 221 ---RSILLNPETNEILHVFPILRGGSRNYPASATSALLPIKLQDPNSNAIRAEVLICGGAKPEAGVLAGKGEFMNALQDC 297 (539)
Q Consensus 221 ---~~e~yDp~tn~W~~~~p~mp~~~r~yp~~g~av~lpl~~~~~~~~~~~g~Iyv~GG~~~~~~~~~~~~~~~~a~~s~ 297 (539)
++++||+.+++|+ .+++||. +|.. .+++. .+++||++||.+.. ..++++
T Consensus 173 ~~~~~~~yd~~~~~W~-~~~~~p~-~r~~---~~~~~------------~~~~iyv~GG~~~~-----------~~~~~~ 224 (318)
T 2woz_A 173 CTNRVFIYNPKKGDWK-DLAPMKT-PRSM---FGVAI------------HKGKIVIAGGVTED-----------GLSASV 224 (318)
T ss_dssp BCCCEEEEETTTTEEE-EECCCSS-CCBS---CEEEE------------ETTEEEEEEEEETT-----------EEEEEE
T ss_pred ccceEEEEcCCCCEEE-ECCCCCC-Cccc---ceEEE------------ECCEEEEEcCcCCC-----------CccceE
Confidence 4899999999998 7899987 5653 23333 38899999997521 135678
Q ss_pred EEEEeeCCCCceeee-ccCCCceeceeEEecCCcEEEEcCcCCCCCCcc-cCCCCCCccEEEcCCCCCCCceEecCCCCC
Q 039705 298 GRIEITNKSATWQRE-MMPSPRVMGEMLLLPTGDVLIINGAKKGTAGWN-FATDPNTTPVLYEPDDPINERFSELTPTSK 375 (539)
Q Consensus 298 ~~~d~~~~~~~W~~~-~M~~~R~~~~~vvlpdG~I~vvGG~~~g~~g~~-~~~~~~~~~e~YdP~t~~g~~Wt~~a~~~~ 375 (539)
++||+. +++|+.. +||.+|..+.++++ +++|||+||........+ ........+++|||+++ +|+.+ ++.
T Consensus 225 ~~yd~~--~~~W~~~~~~p~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~---~W~~~--~~~ 296 (318)
T 2woz_A 225 EAFDLK--TNKWEVMTEFPQERSSISLVSL-AGSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDKK---EWAGM--LKE 296 (318)
T ss_dssp EEEETT--TCCEEECCCCSSCCBSCEEEEE-TTEEEEECCBCCBC----CCBCCBCCCEEEEETTTT---EEEEE--ESC
T ss_pred EEEECC--CCeEEECCCCCCcccceEEEEE-CCEEEEECCeeccCCCCceeccceeeeEEEEeCCCC---Eehhh--ccc
Confidence 999986 5899997 99999999887665 999999999762110000 00112347999999999 99999 888
Q ss_pred CccceeeEeeCCCCeEEEec
Q 039705 376 PRMCHSTSVVLPDGKILVAG 395 (539)
Q Consensus 376 ~R~yhs~a~llpdG~V~v~G 395 (539)
+|..|+++++ +++||+..
T Consensus 297 ~r~~~~~~~~--~~~iyi~~ 314 (318)
T 2woz_A 297 IRYASGASCL--ATRLNLFK 314 (318)
T ss_dssp CGGGTTCEEE--EEEEEGGG
T ss_pred ccccccceee--CCEEEEEE
Confidence 9999999888 99999864
No 9
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=100.00 E-value=1.1e-32 Score=278.84 Aligned_cols=251 Identities=12% Similarity=0.128 Sum_probs=201.1
Q ss_pred CCcEEEecCCCCCCCeEEEEeCCCCccceeecccccccccccceeEEccCCcEEEEcCccC---CeEEEE-ecCCCccee
Q 039705 111 NGTIVISGGWSSRGRSVRYLSGCYHACYWKEHHWELSAKRWFSTQHILPDGSFIVVGGRRE---FSYEYI-LKEGKRIIY 186 (539)
Q Consensus 111 dG~l~v~GG~~~g~~~v~~ydP~~~t~~W~~~~~~m~~~R~y~s~~~L~dG~VyvvGG~~~---~~~E~y-P~~~~~~w~ 186 (539)
.+.||++||... .+++++|||. +++|+.+++ |+.+|.+++++++ +++|||+||.+. ..+++| |.++ +|.
T Consensus 11 ~~~l~~~GG~~~-~~~~~~~d~~--~~~W~~~~~-~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~d~~~~--~W~ 83 (306)
T 3ii7_A 11 HDYRIALFGGSQ-PQSCRYFNPK--DYSWTDIRC-PFEKRRDAACVFW-DNVVYILGGSQLFPIKRMDCYNVVKD--SWY 83 (306)
T ss_dssp CCEEEEEECCSS-TTSEEEEETT--TTEEEECCC-CSCCCBSCEEEEE-TTEEEEECCBSSSBCCEEEEEETTTT--EEE
T ss_pred cceEEEEeCCCC-CceEEEecCC--CCCEecCCC-CCcccceeEEEEE-CCEEEEEeCCCCCCcceEEEEeCCCC--eEE
Confidence 478999999765 7899999999 999999987 9999999998887 899999999762 468899 8887 997
Q ss_pred eccCccccCCCCCCCCcceEEEeeCCcEEEEEcC--------ceeEeeCCCCeEEEEcccCCCCCCccCCCccEEecccc
Q 039705 187 DLPILNETTNPSENNLYPFVFLSTDGNLFIFAND--------RSILLNPETNEILHVFPILRGGSRNYPASATSALLPIK 258 (539)
Q Consensus 187 ~~~~l~~~~~~~~~~~yp~~~~~~~G~Iyv~Gg~--------~~e~yDp~tn~W~~~~p~mp~~~r~yp~~g~av~lpl~ 258 (539)
..+.++.. .+-+..++.+++||++||. ++++||+.+++|+ .+++||. +|.. .+++.
T Consensus 84 ~~~~~p~~-------r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~-~~~~~p~-~r~~---~~~~~---- 147 (306)
T 3ii7_A 84 SKLGPPTP-------RDSLAACAAEGKIYTSGGSEVGNSALYLFECYDTRTESWH-TKPSMLT-QRCS---HGMVE---- 147 (306)
T ss_dssp EEECCSSC-------CBSCEEEEETTEEEEECCBBTTBSCCCCEEEEETTTTEEE-EECCCSS-CCBS---CEEEE----
T ss_pred ECCCCCcc-------ccceeEEEECCEEEEECCCCCCCcEeeeEEEEeCCCCceE-eCCCCcC-Ccce---eEEEE----
Confidence 65444332 2335677889999999994 4899999999998 7899987 5653 23333
Q ss_pred cCCCCCCCcccEEEEecCCCCCcccccCCCcccccCCceEEEEeeCCCCceeee-ccCCCceeceeEEecCCcEEEEcCc
Q 039705 259 LQDPNSNAIRAEVLICGGAKPEAGVLAGKGEFMNALQDCGRIEITNKSATWQRE-MMPSPRVMGEMLLLPTGDVLIINGA 337 (539)
Q Consensus 259 ~~~~~~~~~~g~Iyv~GG~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~-~M~~~R~~~~~vvlpdG~I~vvGG~ 337 (539)
++++||++||.+..... ...++++++||+. +++|+.. +|+.+|..|+++++ +++|||+||.
T Consensus 148 --------~~~~iyv~GG~~~~~~~-------~~~~~~~~~yd~~--~~~W~~~~~~p~~r~~~~~~~~-~~~i~v~GG~ 209 (306)
T 3ii7_A 148 --------ANGLIYVCGGSLGNNVS-------GRVLNSCEVYDPA--TETWTELCPMIEARKNHGLVFV-KDKIFAVGGQ 209 (306)
T ss_dssp --------ETTEEEEECCEESCTTT-------CEECCCEEEEETT--TTEEEEECCCSSCCBSCEEEEE-TTEEEEECCE
T ss_pred --------ECCEEEEECCCCCCCCc-------ccccceEEEeCCC--CCeEEECCCccchhhcceEEEE-CCEEEEEeCC
Confidence 38999999997521110 0126789999987 5899998 99999999997766 9999999997
Q ss_pred CCCCCCcccCCCCCCccEEEcCCCCCCCceEecCCCCCCccceeeEeeCCCCeEEEecCCCCCCCccCCCCCCCcceeeE
Q 039705 338 KKGTAGWNFATDPNTTPVLYEPDDPINERFSELTPTSKPRMCHSTSVVLPDGKILVAGSNPHSRYNLTSGSKYPTELRIE 417 (539)
Q Consensus 338 ~~g~~g~~~~~~~~~~~e~YdP~t~~g~~Wt~~a~~~~~R~yhs~a~llpdG~V~v~GG~~~~~~~~~~~~~~p~~~~vE 417 (539)
+. . ....++++|||+++ +|+.+++|+.+|..|+++++ +++|||+||..... + ..+++
T Consensus 210 ~~-~-------~~~~~~~~yd~~~~---~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~--------~--~~~~~ 266 (306)
T 3ii7_A 210 NG-L-------GGLDNVEYYDIKLN---EWKMVSPMPWKGVTVKCAAV--GSIVYVLAGFQGVG--------R--LGHIL 266 (306)
T ss_dssp ET-T-------EEBCCEEEEETTTT---EEEECCCCSCCBSCCEEEEE--TTEEEEEECBCSSS--------B--CCEEE
T ss_pred CC-C-------CCCceEEEeeCCCC---cEEECCCCCCCccceeEEEE--CCEEEEEeCcCCCe--------e--eeeEE
Confidence 62 1 12347999999999 99999999999999998888 99999999975431 1 35899
Q ss_pred EecCCCCC
Q 039705 418 KFYPPYFD 425 (539)
Q Consensus 418 ~y~Ppyl~ 425 (539)
+|+|..-.
T Consensus 267 ~yd~~~~~ 274 (306)
T 3ii7_A 267 EYNTETDK 274 (306)
T ss_dssp EEETTTTE
T ss_pred EEcCCCCe
Confidence 99998743
No 10
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=100.00 E-value=2.4e-33 Score=285.18 Aligned_cols=263 Identities=14% Similarity=0.156 Sum_probs=204.7
Q ss_pred EEEEECCCCCEEeCccC--CCcccccceecCCCcEEEecCCC----C-C---CCeEEEEeCCCCccceeecccccccccc
Q 039705 82 AVEYDAESAAIRPLKIL--TDTWSSSGGLSANGTIVISGGWS----S-R---GRSVRYLSGCYHACYWKEHHWELSAKRW 151 (539)
Q Consensus 82 ~~~yDp~t~~w~~l~~~--~~~~c~~~~~l~dG~l~v~GG~~----~-g---~~~v~~ydP~~~t~~W~~~~~~m~~~R~ 151 (539)
..+|||.+++|+. ..+ +..++.++++..+++||++||.. . . .+.+++|||. +++|+++++ |+.+|.
T Consensus 15 ~~~yd~~~~~W~~-~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~--~~~W~~~~~-~p~~r~ 90 (315)
T 4asc_A 15 AVAYDPAANECYC-ASLSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHL--DSEWLGMPP-LPSPRC 90 (315)
T ss_dssp EEEEETTTTEEEE-EECCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETT--TTEEEECCC-BSSCEE
T ss_pred eEEECCCCCeEec-CCCCCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCC--CCeEEECCC-CCcchh
Confidence 5689999999987 444 34677777888899999999951 1 1 2458899999 999999987 999999
Q ss_pred cceeEEccCCcEEEEcCcc----C---CeEEEE-ecCCCcceeeccCccccCCCCCCCCcceEEEeeCCcEEEEEcC---
Q 039705 152 FSTQHILPDGSFIVVGGRR----E---FSYEYI-LKEGKRIIYDLPILNETTNPSENNLYPFVFLSTDGNLFIFAND--- 220 (539)
Q Consensus 152 y~s~~~L~dG~VyvvGG~~----~---~~~E~y-P~~~~~~w~~~~~l~~~~~~~~~~~yp~~~~~~~G~Iyv~Gg~--- 220 (539)
+++++++ +++|||+||.+ . .++++| |.++ +|...+.++.. .+.|++++.+++||++||.
T Consensus 91 ~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~--~W~~~~~~p~~-------r~~~~~~~~~~~iyv~GG~~~~ 160 (315)
T 4asc_A 91 LFGLGEA-LNSIYVVGGREIKDGERCLDSVMCYDRLSF--KWGESDPLPYV-------VYGHTVLSHMDLVYVIGGKGSD 160 (315)
T ss_dssp SCEEEEE-TTEEEEECCEESSTTCCBCCCEEEEETTTT--EEEECCCCSSC-------CBSCEEEEETTEEEEECCBCTT
T ss_pred ceeEEEE-CCEEEEEeCCcCCCCCcccceEEEECCCCC--cEeECCCCCCc-------ccceeEEEECCEEEEEeCCCCC
Confidence 9998888 89999999964 1 468999 8887 99866544332 2346678899999999995
Q ss_pred -----ceeEeeCCCCeEEEEcccCCCCCCccCCCccEEecccccCCCCCCCcccEEEEecCCCCCcccccCCCcccccCC
Q 039705 221 -----RSILLNPETNEILHVFPILRGGSRNYPASATSALLPIKLQDPNSNAIRAEVLICGGAKPEAGVLAGKGEFMNALQ 295 (539)
Q Consensus 221 -----~~e~yDp~tn~W~~~~p~mp~~~r~yp~~g~av~lpl~~~~~~~~~~~g~Iyv~GG~~~~~~~~~~~~~~~~a~~ 295 (539)
++++||+.+++|+ .+++||. +|.. .+++. ++++||++||.+.. ..++
T Consensus 161 ~~~~~~~~~yd~~~~~W~-~~~~~p~-~r~~---~~~~~------------~~~~iyv~GG~~~~-----------~~~~ 212 (315)
T 4asc_A 161 RKCLNKMCVYDPKKFEWK-ELAPMQT-ARSL---FGATV------------HDGRIIVAAGVTDT-----------GLTS 212 (315)
T ss_dssp SCBCCCEEEEETTTTEEE-ECCCCSS-CCBS---CEEEE------------ETTEEEEEEEECSS-----------SEEE
T ss_pred CcccceEEEEeCCCCeEE-ECCCCCC-chhc---eEEEE------------ECCEEEEEeccCCC-----------Cccc
Confidence 5899999999998 7999987 5653 23333 38899999997621 1356
Q ss_pred ceEEEEeeCCCCceeee-ccCCCceeceeEEecCCcEEEEcCcCCCCCCcc--cCCCCCCccEEEcCCCCCCCceEecCC
Q 039705 296 DCGRIEITNKSATWQRE-MMPSPRVMGEMLLLPTGDVLIINGAKKGTAGWN--FATDPNTTPVLYEPDDPINERFSELTP 372 (539)
Q Consensus 296 s~~~~d~~~~~~~W~~~-~M~~~R~~~~~vvlpdG~I~vvGG~~~g~~g~~--~~~~~~~~~e~YdP~t~~g~~Wt~~a~ 372 (539)
++++||+. +++|+.. +|+.+|..++++++ +++|||+||.+. ..... .......++++|||+++ +|+.+
T Consensus 213 ~~~~yd~~--~~~W~~~~~~p~~r~~~~~~~~-~~~l~v~GG~~~-~~~~~~~~~~~~~~~v~~yd~~~~---~W~~~-- 283 (315)
T 4asc_A 213 SAEVYSIT--DNKWAPFEAFPQERSSLSLVSL-VGTLYAIGGFAT-LETESGELVPTELNDIWRYNEEEK---KWEGV-- 283 (315)
T ss_dssp EEEEEETT--TTEEEEECCCSSCCBSCEEEEE-TTEEEEEEEEEE-EECTTSCEEEEEEEEEEEEETTTT---EEEEE--
T ss_pred eEEEEECC--CCeEEECCCCCCcccceeEEEE-CCEEEEECCccc-cCcCCccccccccCcEEEecCCCC---hhhhh--
Confidence 88999986 5899998 99999999987766 999999999752 10000 00012236899999999 99999
Q ss_pred CCCCccceeeEeeCCCCeEEEecCC
Q 039705 373 TSKPRMCHSTSVVLPDGKILVAGSN 397 (539)
Q Consensus 373 ~~~~R~yhs~a~llpdG~V~v~GG~ 397 (539)
++.+|..|+++++ ++++|+....
T Consensus 284 ~~~~r~~~~~~~~--~~~l~v~~~~ 306 (315)
T 4asc_A 284 LREIAYAAGATFL--PVRLNVLRLT 306 (315)
T ss_dssp ESCSSCCSSCEEE--EEEECGGGSE
T ss_pred ccCCcCccceEEe--CCEEEEEEeh
Confidence 6778999998888 9999998664
No 11
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=100.00 E-value=8.2e-32 Score=271.41 Aligned_cols=248 Identities=17% Similarity=0.208 Sum_probs=199.2
Q ss_pred CCCcEEEecC-CCC--CCCeEEEEeCCCCccceeecccccccccccceeEEccCCcEEEEcCccC----CeEEEE-ecCC
Q 039705 110 ANGTIVISGG-WSS--RGRSVRYLSGCYHACYWKEHHWELSAKRWFSTQHILPDGSFIVVGGRRE----FSYEYI-LKEG 181 (539)
Q Consensus 110 ~dG~l~v~GG-~~~--g~~~v~~ydP~~~t~~W~~~~~~m~~~R~y~s~~~L~dG~VyvvGG~~~----~~~E~y-P~~~ 181 (539)
.+++||++|| ... ..+++++|||. +++|..+++ |+.+|.+++++.+ +++||++||.+. ..+++| +.++
T Consensus 13 ~~~~i~~~GG~~~~~~~~~~~~~~d~~--~~~W~~~~~-~p~~r~~~~~~~~-~~~l~v~GG~~~~~~~~~~~~~d~~~~ 88 (301)
T 2vpj_A 13 ANEVLLVVGGFGSQQSPIDVVEKYDPK--TQEWSFLPS-ITRKRRYVASVSL-HDRIYVIGGYDGRSRLSSVECLDYTAD 88 (301)
T ss_dssp CCEEEEEECCEETTTEECCCEEEEETT--TTEEEECCC-CSSCCBSCEEEEE-TTEEEEECCBCSSCBCCCEEEEETTCC
T ss_pred CCCEEEEEeCccCCCcceeEEEEEcCC--CCeEEeCCC-CChhhccccEEEE-CCEEEEEcCCCCCccCceEEEEECCCC
Confidence 5889999999 432 26789999999 999999987 9999999988887 899999999864 468899 8877
Q ss_pred Ccc---eeeccCccccCCCCCCCCcceEEEeeCCcEEEEEcC-------ceeEeeCCCCeEEEEcccCCCCCCccCCCcc
Q 039705 182 KRI---IYDLPILNETTNPSENNLYPFVFLSTDGNLFIFAND-------RSILLNPETNEILHVFPILRGGSRNYPASAT 251 (539)
Q Consensus 182 ~~~---w~~~~~l~~~~~~~~~~~yp~~~~~~~G~Iyv~Gg~-------~~e~yDp~tn~W~~~~p~mp~~~r~yp~~g~ 251 (539)
+ |...+.++.. .+.+.++..+++||++||. ++++||+.+++|+ .+++||. +|.. .+
T Consensus 89 --~~~~W~~~~~~p~~-------r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~-~~~~~p~-~r~~---~~ 154 (301)
T 2vpj_A 89 --EDGVWYSVAPMNVR-------RGLAGATTLGDMIYVSGGFDGSRRHTSMERYDPNIDQWS-MLGDMQT-AREG---AG 154 (301)
T ss_dssp --TTCCCEEECCCSSC-------CBSCEEEEETTEEEEECCBCSSCBCCEEEEEETTTTEEE-EEEECSS-CCBS---CE
T ss_pred --CCCeeEECCCCCCC-------ccceeEEEECCEEEEEcccCCCcccceEEEEcCCCCeEE-ECCCCCC-Cccc---ce
Confidence 7 9765544332 2335677789999999983 5899999999998 7889987 5553 23
Q ss_pred EEecccccCCCCCCCcccEEEEecCCCCCcccccCCCcccccCCceEEEEeeCCCCceeee-ccCCCceeceeEEecCCc
Q 039705 252 SALLPIKLQDPNSNAIRAEVLICGGAKPEAGVLAGKGEFMNALQDCGRIEITNKSATWQRE-MMPSPRVMGEMLLLPTGD 330 (539)
Q Consensus 252 av~lpl~~~~~~~~~~~g~Iyv~GG~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~-~M~~~R~~~~~vvlpdG~ 330 (539)
++. .+++||++||.+.. ..++++++||+. +++|+.. +|+.+|..++++++ +++
T Consensus 155 ~~~------------~~~~iyv~GG~~~~-----------~~~~~~~~~d~~--~~~W~~~~~~p~~r~~~~~~~~-~~~ 208 (301)
T 2vpj_A 155 LVV------------ASGVIYCLGGYDGL-----------NILNSVEKYDPH--TGHWTNVTPMATKRSGAGVALL-NDH 208 (301)
T ss_dssp EEE------------ETTEEEEECCBCSS-----------CBCCCEEEEETT--TTEEEEECCCSSCCBSCEEEEE-TTE
T ss_pred EEE------------ECCEEEEECCCCCC-----------cccceEEEEeCC--CCcEEeCCCCCcccccceEEEE-CCE
Confidence 333 38999999997621 246789999986 5999997 99999999987766 999
Q ss_pred EEEEcCcCCCCCCcccCCCCCCccEEEcCCCCCCCceEecCCCCCCccceeeEeeCCCCeEEEecCCCCCCCccCCCCCC
Q 039705 331 VLIINGAKKGTAGWNFATDPNTTPVLYEPDDPINERFSELTPTSKPRMCHSTSVVLPDGKILVAGSNPHSRYNLTSGSKY 410 (539)
Q Consensus 331 I~vvGG~~~g~~g~~~~~~~~~~~e~YdP~t~~g~~Wt~~a~~~~~R~yhs~a~llpdG~V~v~GG~~~~~~~~~~~~~~ 410 (539)
|||+||.+ +. ....++++||++++ +|+.+++|+.+|..|+++++ +++||+.||.....
T Consensus 209 i~v~GG~~-~~-------~~~~~v~~yd~~~~---~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~--------- 266 (301)
T 2vpj_A 209 IYVVGGFD-GT-------AHLSSVEAYNIRTD---SWTTVTSMTTPRCYVGATVL--RGRLYAIAGYDGNS--------- 266 (301)
T ss_dssp EEEECCBC-SS-------SBCCCEEEEETTTT---EEEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSS---------
T ss_pred EEEEeCCC-CC-------cccceEEEEeCCCC---cEEECCCCCCcccceeEEEE--CCEEEEEcCcCCCc---------
Confidence 99999986 22 12347999999999 99999999999999998877 99999999964331
Q ss_pred CcceeeEEecCCCC
Q 039705 411 PTELRIEKFYPPYF 424 (539)
Q Consensus 411 p~~~~vE~y~Ppyl 424 (539)
...++|+|+|..-
T Consensus 267 -~~~~v~~yd~~~~ 279 (301)
T 2vpj_A 267 -LLSSIECYDPIID 279 (301)
T ss_dssp -BEEEEEEEETTTT
T ss_pred -ccccEEEEcCCCC
Confidence 1468999999763
No 12
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=100.00 E-value=6.9e-32 Score=278.81 Aligned_cols=263 Identities=14% Similarity=0.119 Sum_probs=191.9
Q ss_pred eCccCCCcccccceecCCCcEEEecCCCCCCCeEEEEeCCCCccceeecccccc-cccccceeEEccCCcEEEEcCc-c-
Q 039705 94 PLKILTDTWSSSGGLSANGTIVISGGWSSRGRSVRYLSGCYHACYWKEHHWELS-AKRWFSTQHILPDGSFIVVGGR-R- 170 (539)
Q Consensus 94 ~l~~~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydP~~~t~~W~~~~~~m~-~~R~y~s~~~L~dG~VyvvGG~-~- 170 (539)
+++.++..++.+.+++.+++||++||.. .+++++||+...+++|+++++ |+ .+|.+++++++ +++|||+||. +
T Consensus 2 ~l~~lP~~r~~~~~~~~~~~iyv~GG~~--~~~~~~~d~~~~~~~W~~~~~-~p~~~R~~~~~~~~-~~~lyv~GG~~~~ 77 (357)
T 2uvk_A 2 VLPETPVPFKSGTGAIDNDTVYIGLGSA--GTAWYKLDTQAKDKKWTALAA-FPGGPRDQATSAFI-DGNLYVFGGIGKN 77 (357)
T ss_dssp CSCCCSSCCCSCEEEEETTEEEEECGGG--TTCEEEEETTSSSCCEEECCC-CTTCCCBSCEEEEE-TTEEEEECCEEEC
T ss_pred CCCCCCccccceEEEEECCEEEEEeCcC--CCeEEEEccccCCCCeeECCC-CCCCcCccceEEEE-CCEEEEEcCCCCC
Confidence 4566777777777777799999999975 357999999722489999997 99 89999998888 8999999998 3
Q ss_pred -------CCeEEEE-ecCCCcceeeccCccccCCCCCCCCcceEEEeeCCcEEEEEc-----------------------
Q 039705 171 -------EFSYEYI-LKEGKRIIYDLPILNETTNPSENNLYPFVFLSTDGNLFIFAN----------------------- 219 (539)
Q Consensus 171 -------~~~~E~y-P~~~~~~w~~~~~l~~~~~~~~~~~yp~~~~~~~G~Iyv~Gg----------------------- 219 (539)
..++++| |.++ +|...+.+.. ...+-+.+++.+++||++||
T Consensus 78 ~~~~~~~~~~v~~yd~~~~--~W~~~~~~~p------~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~ 149 (357)
T 2uvk_A 78 SEGLTQVFNDVHKYNPKTN--SWVKLMSHAP------MGMAGHVTFVHNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAI 149 (357)
T ss_dssp TTSCEEECCCEEEEETTTT--EEEECSCCCS------SCCSSEEEEEETTEEEEEECCCHHHHHHHHHHHHHHTTCHHHH
T ss_pred CCccceeeccEEEEeCCCC--cEEECCCCCC------cccccceEEEECCEEEEEeCcCCCcCcccccchhhcCCcccch
Confidence 1468999 9888 9986654431 12234666779999999999
Q ss_pred ------------------CceeEeeCCCCeEEEEcccCCCCCCccCCCccEEecccccCCCCCCCcccEEEEecCCCCCc
Q 039705 220 ------------------DRSILLNPETNEILHVFPILRGGSRNYPASATSALLPIKLQDPNSNAIRAEVLICGGAKPEA 281 (539)
Q Consensus 220 ------------------~~~e~yDp~tn~W~~~~p~mp~~~r~yp~~g~av~lpl~~~~~~~~~~~g~Iyv~GG~~~~~ 281 (539)
+++++||+.+++|+ .+++||. .|.+ ..+++. .+++||++||.+...
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~-~~~~~p~-~~~~--~~~~~~------------~~~~iyv~GG~~~~~ 213 (357)
T 2uvk_A 150 DKINAHYFDKKAEDYFFNKFLLSFDPSTQQWS-YAGESPW-YGTA--GAAVVN------------KGDKTWLINGEAKPG 213 (357)
T ss_dssp HHHHHHHHSSCGGGGCCCCEEEEEETTTTEEE-EEEECSS-CCCB--SCEEEE------------ETTEEEEECCEEETT
T ss_pred hhhhhhhccccccccCCcccEEEEeCCCCcEE-ECCCCCC-CCcc--cccEEE------------ECCEEEEEeeecCCC
Confidence 35889999999998 6888886 3332 123332 389999999975211
Q ss_pred ccccCCCcccccCCceEEEEeeCCCCceeee-ccCCCc--eeceeEEecCCcEEEEcCcCCCCCC--------c-ccCCC
Q 039705 282 GVLAGKGEFMNALQDCGRIEITNKSATWQRE-MMPSPR--VMGEMLLLPTGDVLIINGAKKGTAG--------W-NFATD 349 (539)
Q Consensus 282 ~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~-~M~~~R--~~~~~vvlpdG~I~vvGG~~~g~~g--------~-~~~~~ 349 (539)
..+..+++||+...+++|+.. +|+.+| ..+.+++ .+++|||+||....... | .....
T Consensus 214 ----------~~~~~v~~~d~d~~~~~W~~~~~~~~~~~~~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~ 282 (357)
T 2uvk_A 214 ----------LRTDAVFELDFTGNNLKWNKLAPVSSPDGVAGGFAGI-SNDSLIFAGGAGFKGSRENYQNGKNYAHEGLK 282 (357)
T ss_dssp ----------EECCCEEEEECC---CEEEECCCSSTTTCCBSCEEEE-ETTEEEEECCEECTTHHHHHHTTCSSTTTTCC
T ss_pred ----------cccCceEEEEecCCCCcEEecCCCCCCcccccceEEE-ECCEEEEEcCccccCCcccccccceecccccc
Confidence 135678889873336899997 887765 4555554 59999999997521000 0 00112
Q ss_pred CCCccEEEcCCCCCCCceEecCCCCCCccceeeEeeCCCCeEEEecCCCCC
Q 039705 350 PNTTPVLYEPDDPINERFSELTPTSKPRMCHSTSVVLPDGKILVAGSNPHS 400 (539)
Q Consensus 350 ~~~~~e~YdP~t~~g~~Wt~~a~~~~~R~yhs~a~llpdG~V~v~GG~~~~ 400 (539)
.+.++++|||+++ +|+.+++|+.+|.+|+++++ +++|||+||....
T Consensus 283 ~~~~~~~yd~~~~---~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~ 328 (357)
T 2uvk_A 283 KSYSTDIHLWHNG---KWDKSGELSQGRAYGVSLPW--NNSLLIIGGETAG 328 (357)
T ss_dssp CEECCEEEECC------CEEEEECSSCCBSSEEEEE--TTEEEEEEEECGG
T ss_pred ceeeEEEEecCCC---ceeeCCCCCCCcccceeEEe--CCEEEEEeeeCCC
Confidence 3357899999999 99999999999999998776 9999999997544
No 13
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=99.97 E-value=1.8e-30 Score=263.87 Aligned_cols=250 Identities=12% Similarity=0.082 Sum_probs=190.8
Q ss_pred CCcEEEecCCCCCCCeEEEEeCCCCccceeecccccc--cccccceeEEccCCcEEEEcCcc----C------CeEEEE-
Q 039705 111 NGTIVISGGWSSRGRSVRYLSGCYHACYWKEHHWELS--AKRWFSTQHILPDGSFIVVGGRR----E------FSYEYI- 177 (539)
Q Consensus 111 dG~l~v~GG~~~g~~~v~~ydP~~~t~~W~~~~~~m~--~~R~y~s~~~L~dG~VyvvGG~~----~------~~~E~y- 177 (539)
...|+++|| +.+.+|||. +++|.. ++ |+ .+|.+++++++ +++|||+||.. . ..+++|
T Consensus 4 ~~~l~~~GG-----~~~~~yd~~--~~~W~~-~~-~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~~~~~d 73 (315)
T 4asc_A 4 QDLIFMISE-----EGAVAYDPA--ANECYC-AS-LSSQVPKNHVSLVTK-ENQVFVAGGLFYNEDNKEDPMSAYFLQFD 73 (315)
T ss_dssp EEEEEEEET-----TEEEEEETT--TTEEEE-EE-CCCCSCSSEEEEECT-TCCEEEEEEEEECSSCSSSCEEEEEEEEE
T ss_pred ceEEEEEcC-----CceEEECCC--CCeEec-CC-CCCCCCccceEEEEE-CCEEEEEcCcccCCCCCccccccceEEec
Confidence 457889998 579999999 999987 44 64 47988888777 89999999952 1 137888
Q ss_pred ecCCCcceeeccCccccCCCCCCCCcceEEEeeCCcEEEEEcC----------ceeEeeCCCCeEEEEcccCCCCCCccC
Q 039705 178 LKEGKRIIYDLPILNETTNPSENNLYPFVFLSTDGNLFIFAND----------RSILLNPETNEILHVFPILRGGSRNYP 247 (539)
Q Consensus 178 P~~~~~~w~~~~~l~~~~~~~~~~~yp~~~~~~~G~Iyv~Gg~----------~~e~yDp~tn~W~~~~p~mp~~~r~yp 247 (539)
|.++ +|..++.++..+ +-|.+++.+++||++||. ++++||+.+++|+ .+++||. +|..
T Consensus 74 ~~~~--~W~~~~~~p~~r-------~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~-~~~~~p~-~r~~- 141 (315)
T 4asc_A 74 HLDS--EWLGMPPLPSPR-------CLFGLGEALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWG-ESDPLPY-VVYG- 141 (315)
T ss_dssp TTTT--EEEECCCBSSCE-------ESCEEEEETTEEEEECCEESSTTCCBCCCEEEEETTTTEEE-ECCCCSS-CCBS-
T ss_pred CCCC--eEEECCCCCcch-------hceeEEEECCEEEEEeCCcCCCCCcccceEEEECCCCCcEe-ECCCCCC-cccc-
Confidence 8887 997665444322 335677889999999992 4899999999998 7999987 5653
Q ss_pred CCccEEecccccCCCCCCCcccEEEEecCCCCCcccccCCCcccccCCceEEEEeeCCCCceeee-ccCCCceeceeEEe
Q 039705 248 ASATSALLPIKLQDPNSNAIRAEVLICGGAKPEAGVLAGKGEFMNALQDCGRIEITNKSATWQRE-MMPSPRVMGEMLLL 326 (539)
Q Consensus 248 ~~g~av~lpl~~~~~~~~~~~g~Iyv~GG~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~-~M~~~R~~~~~vvl 326 (539)
.+++. .+++||++||...+. ..++++++||+. +++|+.. +|+.+|..|+++++
T Consensus 142 --~~~~~------------~~~~iyv~GG~~~~~----------~~~~~~~~yd~~--~~~W~~~~~~p~~r~~~~~~~~ 195 (315)
T 4asc_A 142 --HTVLS------------HMDLVYVIGGKGSDR----------KCLNKMCVYDPK--KFEWKELAPMQTARSLFGATVH 195 (315)
T ss_dssp --CEEEE------------ETTEEEEECCBCTTS----------CBCCCEEEEETT--TTEEEECCCCSSCCBSCEEEEE
T ss_pred --eeEEE------------ECCEEEEEeCCCCCC----------cccceEEEEeCC--CCeEEECCCCCCchhceEEEEE
Confidence 23332 389999999974221 357789999986 5899997 99999999997766
Q ss_pred cCCcEEEEcCcCCCCCCcccCCCCCCccEEEcCCCCCCCceEecCCCCCCccceeeEeeCCCCeEEEecCCCCCCCccCC
Q 039705 327 PTGDVLIINGAKKGTAGWNFATDPNTTPVLYEPDDPINERFSELTPTSKPRMCHSTSVVLPDGKILVAGSNPHSRYNLTS 406 (539)
Q Consensus 327 pdG~I~vvGG~~~g~~g~~~~~~~~~~~e~YdP~t~~g~~Wt~~a~~~~~R~yhs~a~llpdG~V~v~GG~~~~~~~~~~ 406 (539)
+++|||+||.+. . ....++++|||+++ +|+.+++|+.+|..|+++++ +++|||.||...... ..
T Consensus 196 -~~~iyv~GG~~~-~-------~~~~~~~~yd~~~~---~W~~~~~~p~~r~~~~~~~~--~~~l~v~GG~~~~~~-~~- 259 (315)
T 4asc_A 196 -DGRIIVAAGVTD-T-------GLTSSAEVYSITDN---KWAPFEAFPQERSSLSLVSL--VGTLYAIGGFATLET-ES- 259 (315)
T ss_dssp -TTEEEEEEEECS-S-------SEEEEEEEEETTTT---EEEEECCCSSCCBSCEEEEE--TTEEEEEEEEEEEEC-TT-
T ss_pred -CCEEEEEeccCC-C-------CccceEEEEECCCC---eEEECCCCCCcccceeEEEE--CCEEEEECCccccCc-CC-
Confidence 999999999762 1 12347999999999 99999999999999998887 999999999643100 00
Q ss_pred CCCC-CcceeeEEecCCCC
Q 039705 407 GSKY-PTELRIEKFYPPYF 424 (539)
Q Consensus 407 ~~~~-p~~~~vE~y~Ppyl 424 (539)
+... -...++|+|+|..-
T Consensus 260 ~~~~~~~~~~v~~yd~~~~ 278 (315)
T 4asc_A 260 GELVPTELNDIWRYNEEEK 278 (315)
T ss_dssp SCEEEEEEEEEEEEETTTT
T ss_pred ccccccccCcEEEecCCCC
Confidence 0000 01357999999874
No 14
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=99.97 E-value=6.4e-30 Score=260.20 Aligned_cols=253 Identities=13% Similarity=0.106 Sum_probs=190.4
Q ss_pred CCCcEEEecCCCCCCCeEEEEeCCCCccceeecccccc--cccccceeEEccCCcEEEEcCcc----C------CeEEEE
Q 039705 110 ANGTIVISGGWSSRGRSVRYLSGCYHACYWKEHHWELS--AKRWFSTQHILPDGSFIVVGGRR----E------FSYEYI 177 (539)
Q Consensus 110 ~dG~l~v~GG~~~g~~~v~~ydP~~~t~~W~~~~~~m~--~~R~y~s~~~L~dG~VyvvGG~~----~------~~~E~y 177 (539)
.++.||++||. .+++|||. +++|... + |+ .+|..++++++ +++|||+||.. . ..+++|
T Consensus 14 ~~~~i~~~GG~-----~~~~yd~~--~~~W~~~-~-~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~~~~ 83 (318)
T 2woz_A 14 VKDLILLVNDT-----AAVAYDPM--ENECYLT-A-LAEQIPRNHSSIVTQ-QNQVYVVGGLYVDEENKDQPLQSYFFQL 83 (318)
T ss_dssp EEEEEEEECSS-----EEEEEETT--TTEEEEE-E-ECTTSCSSEEEEECS-SSCEEEEESSCC-------CCCBEEEEE
T ss_pred ecchhhhcccc-----ceEEECCC--CCceecc-c-CCccCCccceEEEEE-CCEEEEECCcccCccccCCCccccEEEE
Confidence 35789999994 48999999 9999984 3 54 67888777666 89999999952 1 127888
Q ss_pred -ecCCCcceeeccCccccCCCCCCCCcceEEEeeCCcEEEEEcC---------ceeEeeCCCCeEEEEcccCCCCCCccC
Q 039705 178 -LKEGKRIIYDLPILNETTNPSENNLYPFVFLSTDGNLFIFAND---------RSILLNPETNEILHVFPILRGGSRNYP 247 (539)
Q Consensus 178 -P~~~~~~w~~~~~l~~~~~~~~~~~yp~~~~~~~G~Iyv~Gg~---------~~e~yDp~tn~W~~~~p~mp~~~r~yp 247 (539)
|.++ +|...+.++..+ +-|.+++.+++||++||. ++++||+.+++|+ .+++||. +|..
T Consensus 84 d~~~~--~W~~~~~~p~~r-------~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~-~~~~~p~-~r~~- 151 (318)
T 2woz_A 84 DNVSS--EWVGLPPLPSAR-------CLFGLGEVDDKIYVVAGKDLQTEASLDSVLCYDPVAAKWS-EVKNLPI-KVYG- 151 (318)
T ss_dssp ETTTT--EEEECSCBSSCB-------CSCEEEEETTEEEEEEEEBTTTCCEEEEEEEEETTTTEEE-EECCCSS-CEES-
T ss_pred eCCCC--cEEECCCCCccc-------cccceEEECCEEEEEcCccCCCCcccceEEEEeCCCCCEe-ECCCCCC-cccc-
Confidence 8887 998765444322 235677889999999984 3799999999998 7889987 5542
Q ss_pred CCccEEecccccCCCCCCCcccEEEEecCCCCCcccccCCCcccccCCceEEEEeeCCCCceeee-ccCCCceeceeEEe
Q 039705 248 ASATSALLPIKLQDPNSNAIRAEVLICGGAKPEAGVLAGKGEFMNALQDCGRIEITNKSATWQRE-MMPSPRVMGEMLLL 326 (539)
Q Consensus 248 ~~g~av~lpl~~~~~~~~~~~g~Iyv~GG~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~-~M~~~R~~~~~vvl 326 (539)
.+++. .+++||++||.+.+. ..++++++||+. +++|+.. +|+.+|..|+++++
T Consensus 152 --~~~~~------------~~~~iyv~GG~~~~~----------~~~~~~~~yd~~--~~~W~~~~~~p~~r~~~~~~~~ 205 (318)
T 2woz_A 152 --HNVIS------------HNGMIYCLGGKTDDK----------KCTNRVFIYNPK--KGDWKDLAPMKTPRSMFGVAIH 205 (318)
T ss_dssp --CEEEE------------ETTEEEEECCEESSS----------CBCCCEEEEETT--TTEEEEECCCSSCCBSCEEEEE
T ss_pred --cEEEE------------ECCEEEEEcCCCCCC----------CccceEEEEcCC--CCEEEECCCCCCCcccceEEEE
Confidence 23332 389999999974211 246789999986 5899998 99999999987765
Q ss_pred cCCcEEEEcCcCCCCCCcccCCCCCCccEEEcCCCCCCCceEecCCCCCCccceeeEeeCCCCeEEEecCCCCCCCccCC
Q 039705 327 PTGDVLIINGAKKGTAGWNFATDPNTTPVLYEPDDPINERFSELTPTSKPRMCHSTSVVLPDGKILVAGSNPHSRYNLTS 406 (539)
Q Consensus 327 pdG~I~vvGG~~~g~~g~~~~~~~~~~~e~YdP~t~~g~~Wt~~a~~~~~R~yhs~a~llpdG~V~v~GG~~~~~~~~~~ 406 (539)
+++|||+||... . ....++|+|||+++ +|+.+++++.+|..|+++++ +++||+.||....... .+
T Consensus 206 -~~~iyv~GG~~~-~-------~~~~~~~~yd~~~~---~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~-~~ 270 (318)
T 2woz_A 206 -KGKIVIAGGVTE-D-------GLSASVEAFDLKTN---KWEVMTEFPQERSSISLVSL--AGSLYAIGGFAMIQLE-SK 270 (318)
T ss_dssp -TTEEEEEEEEET-T-------EEEEEEEEEETTTC---CEEECCCCSSCCBSCEEEEE--TTEEEEECCBCCBC-----
T ss_pred -CCEEEEEcCcCC-C-------CccceEEEEECCCC---eEEECCCCCCcccceEEEEE--CCEEEEECCeeccCCC-Cc
Confidence 999999999762 1 12337899999999 99999999999999998877 9999999997543110 00
Q ss_pred CCCCCcceeeEEecCCCCC
Q 039705 407 GSKYPTELRIEKFYPPYFD 425 (539)
Q Consensus 407 ~~~~p~~~~vE~y~Ppyl~ 425 (539)
....-...++++|+|..-.
T Consensus 271 ~~~~~~~~~v~~yd~~~~~ 289 (318)
T 2woz_A 271 EFAPTEVNDIWKYEDDKKE 289 (318)
T ss_dssp CCBCCBCCCEEEEETTTTE
T ss_pred eeccceeeeEEEEeCCCCE
Confidence 0000013579999998743
No 15
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=99.97 E-value=2.9e-29 Score=259.15 Aligned_cols=275 Identities=10% Similarity=0.051 Sum_probs=194.8
Q ss_pred ceEEEecCCCCEEEEEccccCCCCCccCCCcccccCCCccccccccceeEEEEECC--CCCEEeCccCC-Ccccccceec
Q 039705 33 AMHIILFPNTNKAIMLDAVSLGPSNVRLPVGIYRLNPGAWQKYVDYRALAVEYDAE--SAAIRPLKILT-DTWSSSGGLS 109 (539)
Q Consensus 33 ~~~~~ll~~~gkv~~~g~~~~~~~~~~~~~g~~~~~~~~~~g~~~~~~~~~~yDp~--t~~w~~l~~~~-~~~c~~~~~l 109 (539)
..|++++ .+++||++||... ....+||+. +++|+.++.++ ..++.++++.
T Consensus 11 ~~~~~~~-~~~~iyv~GG~~~--------------------------~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~ 63 (357)
T 2uvk_A 11 KSGTGAI-DNDTVYIGLGSAG--------------------------TAWYKLDTQAKDKKWTALAAFPGGPRDQATSAF 63 (357)
T ss_dssp CSCEEEE-ETTEEEEECGGGT--------------------------TCEEEEETTSSSCCEEECCCCTTCCCBSCEEEE
T ss_pred cceEEEE-ECCEEEEEeCcCC--------------------------CeEEEEccccCCCCeeECCCCCCCcCccceEEE
Confidence 3466666 6999999999641 125689998 49999999988 7888888888
Q ss_pred CCCcEEEecCC-C--C----CCCeEEEEeCCCCccceeecccccc-cccccceeEEccCCcEEEEcCccC----------
Q 039705 110 ANGTIVISGGW-S--S----RGRSVRYLSGCYHACYWKEHHWELS-AKRWFSTQHILPDGSFIVVGGRRE---------- 171 (539)
Q Consensus 110 ~dG~l~v~GG~-~--~----g~~~v~~ydP~~~t~~W~~~~~~m~-~~R~y~s~~~L~dG~VyvvGG~~~---------- 171 (539)
.+++||++||. . + ..+++++|||. +++|+++++ |+ .+|..++++++ +++|||+||.+.
T Consensus 64 ~~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~--~~~W~~~~~-~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~ 139 (357)
T 2uvk_A 64 IDGNLYVFGGIGKNSEGLTQVFNDVHKYNPK--TNSWVKLMS-HAPMGMAGHVTFVH-NGKAYVTGGVNQNIFNGYFEDL 139 (357)
T ss_dssp ETTEEEEECCEEECTTSCEEECCCEEEEETT--TTEEEECSC-CCSSCCSSEEEEEE-TTEEEEEECCCHHHHHHHHHHH
T ss_pred ECCEEEEEcCCCCCCCccceeeccEEEEeCC--CCcEEECCC-CCCcccccceEEEE-CCEEEEEeCcCCCcCcccccch
Confidence 99999999998 2 1 15789999999 999999997 88 89998888886 899999999742
Q ss_pred ----------------------------CeEEEE-ecCCCcceeeccCccccCCCCCCCCcceEEEeeCCcEEEEEcC--
Q 039705 172 ----------------------------FSYEYI-LKEGKRIIYDLPILNETTNPSENNLYPFVFLSTDGNLFIFAND-- 220 (539)
Q Consensus 172 ----------------------------~~~E~y-P~~~~~~w~~~~~l~~~~~~~~~~~yp~~~~~~~G~Iyv~Gg~-- 220 (539)
..+|+| |.++ +|...+.++.. ..+.+++++.+++||++||.
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~~~--~W~~~~~~p~~------~~~~~~~~~~~~~iyv~GG~~~ 211 (357)
T 2uvk_A 140 NEAGKDSTAIDKINAHYFDKKAEDYFFNKFLLSFDPSTQ--QWSYAGESPWY------GTAGAAVVNKGDKTWLINGEAK 211 (357)
T ss_dssp HHHTTCHHHHHHHHHHHHSSCGGGGCCCCEEEEEETTTT--EEEEEEECSSC------CCBSCEEEEETTEEEEECCEEE
T ss_pred hhcCCcccchhhhhhhhccccccccCCcccEEEEeCCCC--cEEECCCCCCC------CcccccEEEECCEEEEEeeecC
Confidence 478999 9888 99754333221 11225677789999999983
Q ss_pred ------ceeEeeC--CCCeEEEEcccCCCCCCccCCCccEEecccccCCCCCCCcccEEEEecCCCCCccccc-CC----
Q 039705 221 ------RSILLNP--ETNEILHVFPILRGGSRNYPASATSALLPIKLQDPNSNAIRAEVLICGGAKPEAGVLA-GK---- 287 (539)
Q Consensus 221 ------~~e~yDp--~tn~W~~~~p~mp~~~r~yp~~g~av~lpl~~~~~~~~~~~g~Iyv~GG~~~~~~~~~-~~---- 287 (539)
++++||+ .+++|+ .+++|+. +|... ..++++ .+++||++||.+....... .+
T Consensus 212 ~~~~~~~v~~~d~d~~~~~W~-~~~~~~~-~~~~~-~~~~~~------------~~~~iyv~GG~~~~~~~~~~~~g~~~ 276 (357)
T 2uvk_A 212 PGLRTDAVFELDFTGNNLKWN-KLAPVSS-PDGVA-GGFAGI------------SNDSLIFAGGAGFKGSRENYQNGKNY 276 (357)
T ss_dssp TTEECCCEEEEECC---CEEE-ECCCSST-TTCCB-SCEEEE------------ETTEEEEECCEECTTHHHHHHTTCSS
T ss_pred CCcccCceEEEEecCCCCcEE-ecCCCCC-Ccccc-cceEEE------------ECCEEEEEcCccccCCccccccccee
Confidence 4677875 999998 7888876 33321 122332 3899999999642100000 00
Q ss_pred -CcccccCCceEEEEeeCCCCceeee-ccCCCceeceeEEecCCcEEEEcCcCCCCCCcccCCCCCCccEEEcCCCCCCC
Q 039705 288 -GEFMNALQDCGRIEITNKSATWQRE-MMPSPRVMGEMLLLPTGDVLIINGAKKGTAGWNFATDPNTTPVLYEPDDPINE 365 (539)
Q Consensus 288 -~~~~~a~~s~~~~d~~~~~~~W~~~-~M~~~R~~~~~vvlpdG~I~vvGG~~~g~~g~~~~~~~~~~~e~YdP~t~~g~ 365 (539)
......+.++++||+. +++|+.. +|+.+|..+.++++ +++|||+||.+. .. ....++++|+.+++
T Consensus 277 ~~~~~~~~~~~~~yd~~--~~~W~~~~~~p~~r~~~~~~~~-~~~i~v~GG~~~-~~------~~~~~v~~l~~~~~--- 343 (357)
T 2uvk_A 277 AHEGLKKSYSTDIHLWH--NGKWDKSGELSQGRAYGVSLPW-NNSLLIIGGETA-GG------KAVTDSVLITVKDN--- 343 (357)
T ss_dssp TTTTCCCEECCEEEECC-----CEEEEECSSCCBSSEEEEE-TTEEEEEEEECG-GG------CEEEEEEEEEC-CC---
T ss_pred ccccccceeeEEEEecC--CCceeeCCCCCCCcccceeEEe-CCEEEEEeeeCC-CC------CEeeeEEEEEEcCc---
Confidence 0001123578999987 6899998 99999999887665 999999999862 11 12347899999999
Q ss_pred ceEecCCCC
Q 039705 366 RFSELTPTS 374 (539)
Q Consensus 366 ~Wt~~a~~~ 374 (539)
+|.+..+.+
T Consensus 344 ~~~~~~~~~ 352 (357)
T 2uvk_A 344 KVTVQNLEH 352 (357)
T ss_dssp SCEEEC---
T ss_pred EeEeeeccc
Confidence 999876554
No 16
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=99.97 E-value=1.1e-29 Score=284.35 Aligned_cols=293 Identities=13% Similarity=0.109 Sum_probs=203.5
Q ss_pred EEEEECCCCCEEeCccCCCcccccceecC-CCcEEEecCCCC--------CCCeEEEEeCCCCccceeeccccccccccc
Q 039705 82 AVEYDAESAAIRPLKILTDTWSSSGGLSA-NGTIVISGGWSS--------RGRSVRYLSGCYHACYWKEHHWELSAKRWF 152 (539)
Q Consensus 82 ~~~yDp~t~~w~~l~~~~~~~c~~~~~l~-dG~l~v~GG~~~--------g~~~v~~ydP~~~t~~W~~~~~~m~~~R~y 152 (539)
...|||.+++|+++..++.. ..+.++++ +|+||++||... +...+++|||. +++|+.++. |+.+|..
T Consensus 168 ~~~~dp~~~~W~~~~~~P~~-~~~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~--t~~w~~~~~-~~~~~~~ 243 (656)
T 1k3i_A 168 YTAPQPGLGRWGPTIDLPIV-PAAAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPS--TGIVSDRTV-TVTKHDM 243 (656)
T ss_dssp CCCCCTTSCEEEEEEECSSC-CSEEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTT--TCCBCCCEE-EECSCCC
T ss_pred cccCCCCCCeeeeeccCCCC-ceeEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCC--CCcEEeCcc-cCCCCCC
Confidence 34589999999998877653 22334455 999999999642 12478999999 999999986 8887754
Q ss_pred c--eeEEccCCcEEEEcCccCCeEEEE-ecCCCcceeeccCccccCCCCCCCCcceEEEeeCCcEEEEEc--------Cc
Q 039705 153 S--TQHILPDGSFIVVGGRREFSYEYI-LKEGKRIIYDLPILNETTNPSENNLYPFVFLSTDGNLFIFAN--------DR 221 (539)
Q Consensus 153 ~--s~~~L~dG~VyvvGG~~~~~~E~y-P~~~~~~w~~~~~l~~~~~~~~~~~yp~~~~~~~G~Iyv~Gg--------~~ 221 (539)
+ +++++.||+||++||.+..++++| |.++ +|...+.|... +.|+.+++++||+||++|| ++
T Consensus 244 ~~~~~~~~~~g~lyv~GG~~~~~v~~yd~~t~--~W~~~~~~~~~------R~~~s~~~~~dg~iyv~GG~~~~~~~~~~ 315 (656)
T 1k3i_A 244 FCPGISMDGNGQIVVTGGNDAKKTSLYDSSSD--SWIPGPDMQVA------RGYQSSATMSDGRVFTIGGSWSGGVFEKN 315 (656)
T ss_dssp SSCEEEECTTSCEEEECSSSTTCEEEEEGGGT--EEEECCCCSSC------CSSCEEEECTTSCEEEECCCCCSSSCCCC
T ss_pred ccccccCCCCCCEEEeCCCCCCceEEecCcCC--ceeECCCCCcc------ccccceEEecCCeEEEEeCcccCCccccc
Confidence 4 456677999999999887789999 9988 99876555432 2344444445999999999 35
Q ss_pred eeEeeCCCCeEEEEc-----ccCCCCCCccCCCccEEecccccCCCCCCCcccEEEEecCCCCCcccccCCCcccccCCc
Q 039705 222 SILLNPETNEILHVF-----PILRGGSRNYPASATSALLPIKLQDPNSNAIRAEVLICGGAKPEAGVLAGKGEFMNALQD 296 (539)
Q Consensus 222 ~e~yDp~tn~W~~~~-----p~mp~~~r~yp~~g~av~lpl~~~~~~~~~~~g~Iyv~GG~~~~~~~~~~~~~~~~a~~s 296 (539)
+|+||+.+++|+ .+ ++|+. .|. .+++. .+++||++||.+...+. ...++.
T Consensus 316 ~e~yd~~t~~W~-~~~~~~~~p~~~-~~~----~~~~~------------~~~~iyv~Gg~~g~~~~-------~~~~~~ 370 (656)
T 1k3i_A 316 GEVYSPSSKTWT-SLPNAKVNPMLT-ADK----QGLYR------------SDNHAWLFGWKKGSVFQ-------AGPSTA 370 (656)
T ss_dssp EEEEETTTTEEE-EETTSCSGGGCC-CCT----TGGGT------------TTCSCCEEECGGGCEEE-------CCSSSE
T ss_pred ceEeCCCCCcce-eCCCcccccccc-ccc----cceee------------cCCceEEEECCCCcEEE-------ecCccc
Confidence 899999999998 56 44543 222 22111 37899999997621110 113568
Q ss_pred eEEEEeeCCCCceeee--ccCC------CceeceeEEe--cCCcEEEEcCcCCCCCCcccCCCCCCccEEEcCCCCCCCc
Q 039705 297 CGRIEITNKSATWQRE--MMPS------PRVMGEMLLL--PTGDVLIINGAKKGTAGWNFATDPNTTPVLYEPDDPINER 366 (539)
Q Consensus 297 ~~~~d~~~~~~~W~~~--~M~~------~R~~~~~vvl--pdG~I~vvGG~~~g~~g~~~~~~~~~~~e~YdP~t~~g~~ 366 (539)
+++||+. +++|... .++. +|..+.++++ .+|+|||+||... ..+. ...+...++++|||+++ +
T Consensus 371 v~~yd~~--~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~-~~~~-~~~~~~~~v~~yd~~~~---~ 443 (656)
T 1k3i_A 371 MNWYYTS--GSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPD-YQDS-DATTNAHIITLGEPGTS---P 443 (656)
T ss_dssp EEEEECS--TTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSS-SSSS-BCCCCEEEEECCSTTSC---C
T ss_pred eeeeecC--CcceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCC-CCCC-CcCCcceEEEcCCCCCC---C
Confidence 8999987 4777653 3322 2444555542 4999999999752 1110 01111226899999999 9
Q ss_pred eEecC--CCCCCccceeeEeeCCCCeEEEecCCCCCCCccCCCCCCCcceeeEEecCCC
Q 039705 367 FSELT--PTSKPRMCHSTSVVLPDGKILVAGSNPHSRYNLTSGSKYPTELRIEKFYPPY 423 (539)
Q Consensus 367 Wt~~a--~~~~~R~yhs~a~llpdG~V~v~GG~~~~~~~~~~~~~~p~~~~vE~y~Ppy 423 (539)
|+.+. +|+.+|..|++ ++++||+|||+||..... .+. + .. ...++|+|+|..
T Consensus 444 W~~~~~~~mp~~R~~~~~-~~l~~g~i~v~GG~~~~~-~~~-~-~~-~~~~v~~ydp~t 497 (656)
T 1k3i_A 444 NTVFASNGLYFARTFHTS-VVLPDGSTFITGGQRRGI-PFE-D-ST-PVFTPEIYVPEQ 497 (656)
T ss_dssp EEEECTTCCSSCCBSCEE-EECTTSCEEEECCBSBCC-TTC-C-CS-BCCCCEEEEGGG
T ss_pred eeEEccCCCCCCcccCCe-EECCCCCEEEECCcccCc-CcC-C-CC-cccceEEEcCCC
Confidence 99987 99999999975 456899999999964321 010 0 11 146899999976
No 17
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=99.95 E-value=5.5e-26 Score=255.95 Aligned_cols=268 Identities=12% Similarity=0.097 Sum_probs=190.4
Q ss_pred ceEEccCCCcccceEEEecCCCCEEEEEccccCCCCCccCCCcccccCCCccccccccceeEEEEECCCCCEEeCc-c--
Q 039705 21 KWELASENSGISAMHIILFPNTNKAIMLDAVSLGPSNVRLPVGIYRLNPGAWQKYVDYRALAVEYDAESAAIRPLK-I-- 97 (539)
Q Consensus 21 ~W~~~~~~~~~~~~~~~ll~~~gkv~~~g~~~~~~~~~~~~~g~~~~~~~~~~g~~~~~~~~~~yDp~t~~w~~l~-~-- 97 (539)
+|.... ..+.+..+.++. .+++||++||... .. .....+||+.+++|+.++ .
T Consensus 378 ~~~~~~-~~p~rr~g~~~~-~~~~iyv~GG~~~--~~---------------------~~~v~~yd~~~~~W~~~~~~~p 432 (695)
T 2zwa_A 378 QLLECE-CPINRKFGDVDV-AGNDVFYMGGSNP--YR---------------------VNEILQLSIHYDKIDMKNIEVS 432 (695)
T ss_dssp EEEECC-CTTCCBSCEEEE-CSSCEEEECCBSS--SB---------------------CCCEEEEEECSSCEEEEECCCC
T ss_pred eEeccC-CCCCCceeEEEE-ECCEEEEECCCCC--CC---------------------cCcEEEEECCCCeEEEeccCCC
Confidence 355543 344444444444 6899999999752 10 234778999999999987 4
Q ss_pred ---CCCcccccceecC--CCcEEEecCCCC---CCCeEEEEeCCCCccceeecccccccccccceeEEccCCcEEEEcCc
Q 039705 98 ---LTDTWSSSGGLSA--NGTIVISGGWSS---RGRSVRYLSGCYHACYWKEHHWELSAKRWFSTQHILPDGSFIVVGGR 169 (539)
Q Consensus 98 ---~~~~~c~~~~~l~--dG~l~v~GG~~~---g~~~v~~ydP~~~t~~W~~~~~~m~~~R~y~s~~~L~dG~VyvvGG~ 169 (539)
++..++.++++.. +|+||++||... ..+++++||+. +++|+.+++ |+.+|++|+++++.+|+|||+||.
T Consensus 433 ~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~~--t~~W~~~~~-~p~~R~~h~~~~~~~~~iyv~GG~ 509 (695)
T 2zwa_A 433 SSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDMK--TREWSMIKS-LSHTRFRHSACSLPDGNVLILGGV 509 (695)
T ss_dssp CSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEETT--TTEEEECCC-CSBCCBSCEEEECTTSCEEEECCB
T ss_pred CCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeCC--CCcEEECCC-CCCCcccceEEEEcCCEEEEECCC
Confidence 5666666666767 999999999763 25789999999 999999987 999999999988779999999996
Q ss_pred cCCeEEEEecCCCcceeeccCccccCCCCCCCCcceEEEeeCCcEEEEEcCceeEeeCCCCeEEEEccc---CCCCCCcc
Q 039705 170 REFSYEYILKEGKRIIYDLPILNETTNPSENNLYPFVFLSTDGNLFIFANDRSILLNPETNEILHVFPI---LRGGSRNY 246 (539)
Q Consensus 170 ~~~~~E~yP~~~~~~w~~~~~l~~~~~~~~~~~yp~~~~~~~G~Iyv~Gg~~~e~yDp~tn~W~~~~p~---mp~~~r~y 246 (539)
+.. . ++++||+.+++|+ .+++ +|. +|..
T Consensus 510 ~~~-----------~------------------------------------~v~~yd~~t~~W~-~~~~~g~~p~-~r~~ 540 (695)
T 2zwa_A 510 TEG-----------P------------------------------------AMLLYNVTEEIFK-DVTPKDEFFQ-NSLV 540 (695)
T ss_dssp CSS-----------C------------------------------------SEEEEETTTTEEE-ECCCSSGGGG-SCCB
T ss_pred CCC-----------C------------------------------------CEEEEECCCCceE-EccCCCCCCC-cccc
Confidence 421 0 2678999999998 6775 665 4542
Q ss_pred CCCccEEecccccCCCCCCCcccEEEEecCCCCCcccccCCCcccccCCceEEEEeeCCCCc------eeee-cc-CCCc
Q 039705 247 PASATSALLPIKLQDPNSNAIRAEVLICGGAKPEAGVLAGKGEFMNALQDCGRIEITNKSAT------WQRE-MM-PSPR 318 (539)
Q Consensus 247 p~~g~av~lpl~~~~~~~~~~~g~Iyv~GG~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~------W~~~-~M-~~~R 318 (539)
.+++++.. ..++||++||...+.. ..++++++||+. +++ |+.. +| +.+|
T Consensus 541 ---~~a~v~~~---------~~~~iyv~GG~~~~~~---------~~~~~v~~yd~~--~~~w~~~~~W~~~~~~p~~~R 597 (695)
T 2zwa_A 541 ---SAGLEFDP---------VSKQGIILGGGFMDQT---------TVSDKAIIFKYD--AENATEPITVIKKLQHPLFQR 597 (695)
T ss_dssp ---SCEEEEET---------TTTEEEEECCBCTTSS---------CBCCEEEEEEEC--TTCSSCCEEEEEEEECGGGCC
T ss_pred ---eeEEEEeC---------CCCEEEEECCcCCCCC---------eeeCcEEEEEcc--CCccccceEEEEcCCCCCCCc
Confidence 23233210 1289999999752110 246789999997 466 8886 76 5899
Q ss_pred eeceeEEecCCcEEEEcCcCCCCCCcccCCCCCCccEEEcCCCCCCCceEecCCCCC--------CccceeeEeeCCCCe
Q 039705 319 VMGEMLLLPTGDVLIINGAKKGTAGWNFATDPNTTPVLYEPDDPINERFSELTPTSK--------PRMCHSTSVVLPDGK 390 (539)
Q Consensus 319 ~~~~~vvlpdG~I~vvGG~~~g~~g~~~~~~~~~~~e~YdP~t~~g~~Wt~~a~~~~--------~R~yhs~a~llpdG~ 390 (539)
..|+++++-||+|||+||.+. .. ......++++|||+++ +|+.+. ++. .|..|++ +++.||+
T Consensus 598 ~~~~~~~~~~~~iyv~GG~~~-~~----~~~~~~~v~~yd~~t~---~W~~~~-~p~~~~~~~~p~~~gh~~-~~~~~g~ 667 (695)
T 2zwa_A 598 YGSQIKYITPRKLLIVGGTSP-SG----LFDRTNSIISLDPLSE---TLTSIP-ISRRIWEDHSLMLAGFSL-VSTSMGT 667 (695)
T ss_dssp BSCEEEEEETTEEEEECCBCS-SC----CCCTTTSEEEEETTTT---EEEECC-CCHHHHHHSCCCCSSCEE-ECC---C
T ss_pred ccceEEEeCCCEEEEECCccC-CC----CCCCCCeEEEEECCCC---eEEEee-ccccccCCCCccceeeeE-EEeCCCE
Confidence 999887773399999999762 11 0123457999999999 999642 221 2445764 4456779
Q ss_pred EEEecCCC
Q 039705 391 ILVAGSNP 398 (539)
Q Consensus 391 V~v~GG~~ 398 (539)
|||+||..
T Consensus 668 i~v~GGg~ 675 (695)
T 2zwa_A 668 IHIIGGGA 675 (695)
T ss_dssp EEEECCEE
T ss_pred EEEEeCCc
Confidence 99999964
No 18
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=99.90 E-value=4.2e-23 Score=232.45 Aligned_cols=237 Identities=15% Similarity=0.141 Sum_probs=175.8
Q ss_pred CEEeCccCCCcccccceecCCCcEEEecCCCC-CCCeEEEEeCCCCccceeecc-c----ccccccccceeEEcc-CCcE
Q 039705 91 AIRPLKILTDTWSSSGGLSANGTIVISGGWSS-RGRSVRYLSGCYHACYWKEHH-W----ELSAKRWFSTQHILP-DGSF 163 (539)
Q Consensus 91 ~w~~l~~~~~~~c~~~~~l~dG~l~v~GG~~~-g~~~v~~ydP~~~t~~W~~~~-~----~m~~~R~y~s~~~L~-dG~V 163 (539)
+|...+..+..+. ++++..+++||++||... ..+++++|||. +++|+.++ + .|+.+|++|+++++. +|+|
T Consensus 378 ~~~~~~~~p~rr~-g~~~~~~~~iyv~GG~~~~~~~~v~~yd~~--~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~l 454 (695)
T 2zwa_A 378 QLLECECPINRKF-GDVDVAGNDVFYMGGSNPYRVNEILQLSIH--YDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQL 454 (695)
T ss_dssp EEEECCCTTCCBS-CEEEECSSCEEEECCBSSSBCCCEEEEEEC--SSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEE
T ss_pred eEeccCCCCCCce-eEEEEECCEEEEECCCCCCCcCcEEEEECC--CCeEEEeccCCCCCCCCccccceEEEEEccCCEE
Confidence 3444433344443 344558999999999753 35789999999 99999987 3 378999999999886 8999
Q ss_pred EEEcCccCCeEEEEecCCCcceeeccCccccCCCCCCCCcceEEEeeCCcEEEEEcCceeEeeCCCCeEEEEcccCCCCC
Q 039705 164 IVVGGRREFSYEYILKEGKRIIYDLPILNETTNPSENNLYPFVFLSTDGNLFIFANDRSILLNPETNEILHVFPILRGGS 243 (539)
Q Consensus 164 yvvGG~~~~~~E~yP~~~~~~w~~~~~l~~~~~~~~~~~yp~~~~~~~G~Iyv~Gg~~~e~yDp~tn~W~~~~p~mp~~~ 243 (539)
||+||.+... . .. +++++||+.+++|+ .+++||. +
T Consensus 455 yv~GG~~~~~----------~--------~~-------------------------~dv~~yd~~t~~W~-~~~~~p~-~ 489 (695)
T 2zwa_A 455 LLIGGRKAPH----------Q--------GL-------------------------SDNWIFDMKTREWS-MIKSLSH-T 489 (695)
T ss_dssp EEECCBSSTT----------C--------BC-------------------------CCCEEEETTTTEEE-ECCCCSB-C
T ss_pred EEEcCCCCCC----------C--------cc-------------------------ccEEEEeCCCCcEE-ECCCCCC-C
Confidence 9999975321 0 00 23689999999998 7999987 5
Q ss_pred CccCCCccEEecccccCCCCCCCcccEEEEecCCCCCcccccCCCcccccCCceEEEEeeCCCCceeee-c---cCCCce
Q 039705 244 RNYPASATSALLPIKLQDPNSNAIRAEVLICGGAKPEAGVLAGKGEFMNALQDCGRIEITNKSATWQRE-M---MPSPRV 319 (539)
Q Consensus 244 r~yp~~g~av~lpl~~~~~~~~~~~g~Iyv~GG~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~-~---M~~~R~ 319 (539)
|.. .+++++ .+++|||+||.+. . . ++++||+. +++|+.. + ||.+|.
T Consensus 490 R~~---h~~~~~-----------~~~~iyv~GG~~~-~-----------~--~v~~yd~~--t~~W~~~~~~g~~p~~r~ 539 (695)
T 2zwa_A 490 RFR---HSACSL-----------PDGNVLILGGVTE-G-----------P--AMLLYNVT--EEIFKDVTPKDEFFQNSL 539 (695)
T ss_dssp CBS---CEEEEC-----------TTSCEEEECCBCS-S-----------C--SEEEEETT--TTEEEECCCSSGGGGSCC
T ss_pred ccc---ceEEEE-----------cCCEEEEECCCCC-C-----------C--CEEEEECC--CCceEEccCCCCCCCccc
Confidence 653 333332 2899999999752 1 1 78999986 5999986 4 999999
Q ss_pred eceeEEecC---CcEEEEcCcCCCCCCcccCCCCCCccEEEcCCCCCCCc------eEecCCC-CCCccceeeEeeCCC-
Q 039705 320 MGEMLLLPT---GDVLIINGAKKGTAGWNFATDPNTTPVLYEPDDPINER------FSELTPT-SKPRMCHSTSVVLPD- 388 (539)
Q Consensus 320 ~~~~vvlpd---G~I~vvGG~~~g~~g~~~~~~~~~~~e~YdP~t~~g~~------Wt~~a~~-~~~R~yhs~a~llpd- 388 (539)
.|+++++ + ++|||+||..... .....++++|||+++ + |+.+.++ +.+|..|+++++ +
T Consensus 540 ~~~a~v~-~~~~~~iyv~GG~~~~~------~~~~~~v~~yd~~~~---~w~~~~~W~~~~~~p~~~R~~~~~~~~--~~ 607 (695)
T 2zwa_A 540 VSAGLEF-DPVSKQGIILGGGFMDQ------TTVSDKAIIFKYDAE---NATEPITVIKKLQHPLFQRYGSQIKYI--TP 607 (695)
T ss_dssp BSCEEEE-ETTTTEEEEECCBCTTS------SCBCCEEEEEEECTT---CSSCCEEEEEEEECGGGCCBSCEEEEE--ET
T ss_pred ceeEEEE-eCCCCEEEEECCcCCCC------CeeeCcEEEEEccCC---ccccceEEEEcCCCCCCCcccceEEEe--CC
Confidence 9986665 6 8999999985211 122347999999999 8 8998886 589999988776 6
Q ss_pred CeEEEecCCCCCCCccCCCCCCCcceeeEEecCCCC
Q 039705 389 GKILVAGSNPHSRYNLTSGSKYPTELRIEKFYPPYF 424 (539)
Q Consensus 389 G~V~v~GG~~~~~~~~~~~~~~p~~~~vE~y~Ppyl 424 (539)
|+|||.||...... .....++|+|+|...
T Consensus 608 ~~iyv~GG~~~~~~-------~~~~~~v~~yd~~t~ 636 (695)
T 2zwa_A 608 RKLLIVGGTSPSGL-------FDRTNSIISLDPLSE 636 (695)
T ss_dssp TEEEEECCBCSSCC-------CCTTTSEEEEETTTT
T ss_pred CEEEEECCccCCCC-------CCCCCeEEEEECCCC
Confidence 99999999754321 112468999999875
No 19
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=98.01 E-value=0.0038 Score=62.59 Aligned_cols=268 Identities=12% Similarity=0.049 Sum_probs=141.3
Q ss_pred eEEEEECCCCCEEeCccC-----C-CcccccceecCCCcEEEecCCCCCCCeEEEEeCCCCcccee-ecccccccccccc
Q 039705 81 LAVEYDAESAAIRPLKIL-----T-DTWSSSGGLSANGTIVISGGWSSRGRSVRYLSGCYHACYWK-EHHWELSAKRWFS 153 (539)
Q Consensus 81 ~~~~yDp~t~~w~~l~~~-----~-~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydP~~~t~~W~-~~~~~m~~~R~y~ 153 (539)
....||++|+++...-.. . -.+. .+..+.++++|++... ...+.++|+. +.+-. .++. ...++
T Consensus 18 ~l~~~d~~t~~~~~~i~~~~n~~~lg~~~-~~i~~~~~~lyv~~~~---~~~v~viD~~--t~~~~~~i~~-~~~p~--- 87 (328)
T 3dsm_A 18 TLSYYDPATCEVENEVFYRANGFKLGDVA-QSMVIRDGIGWIVVNN---SHVIFAIDIN--TFKEVGRITG-FTSPR--- 87 (328)
T ss_dssp EEEEEETTTTEEECSHHHHHHSSCCBSCE-EEEEEETTEEEEEEGG---GTEEEEEETT--TCCEEEEEEC-CSSEE---
T ss_pred eEEEEECCCCEEhhhhHhhhcCcccCccc-eEEEEECCEEEEEEcC---CCEEEEEECc--ccEEEEEcCC-CCCCc---
Confidence 577899999998753210 0 0111 1233457888888642 3679999998 55542 2221 22222
Q ss_pred eeEEccCCcEEEEcCccCCeEEEE-ecCCCccee-eccCccccCCCCCCCCcceEEEeeCCcEEEEE---cCceeEeeCC
Q 039705 154 TQHILPDGSFIVVGGRREFSYEYI-LKEGKRIIY-DLPILNETTNPSENNLYPFVFLSTDGNLFIFA---NDRSILLNPE 228 (539)
Q Consensus 154 s~~~L~dG~VyvvGG~~~~~~E~y-P~~~~~~w~-~~~~l~~~~~~~~~~~yp~~~~~~~G~Iyv~G---g~~~e~yDp~ 228 (539)
..+.-+||++||.... ...+.++ +.+. +-. ..+.-.. ......|..++..+++||+.. +..+.++|++
T Consensus 88 ~i~~~~~g~lyv~~~~-~~~v~~iD~~t~--~~~~~i~~g~~----~~~~~~p~~i~~~~~~lyv~~~~~~~~v~viD~~ 160 (328)
T 3dsm_A 88 YIHFLSDEKAYVTQIW-DYRIFIINPKTY--EITGYIECPDM----DMESGSTEQMVQYGKYVYVNCWSYQNRILKIDTE 160 (328)
T ss_dssp EEEEEETTEEEEEEBS-CSEEEEEETTTT--EEEEEEECTTC----CTTTCBCCCEEEETTEEEEEECTTCCEEEEEETT
T ss_pred EEEEeCCCeEEEEECC-CCeEEEEECCCC--eEEEEEEcCCc----cccCCCcceEEEECCEEEEEcCCCCCEEEEEECC
Confidence 2333268999998743 2456666 6554 321 1221110 000113444555789999985 3468899999
Q ss_pred CCeEEEEcccCCCCCCccCCCccEEecccccCCCCCCCcccEEEEecCCCCCcccccCCCcccccCCceEEEEeeCCCCc
Q 039705 229 TNEILHVFPILRGGSRNYPASATSALLPIKLQDPNSNAIRAEVLICGGAKPEAGVLAGKGEFMNALQDCGRIEITNKSAT 308 (539)
Q Consensus 229 tn~W~~~~p~mp~~~r~yp~~g~av~lpl~~~~~~~~~~~g~Iyv~GG~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~ 308 (539)
+++..+.++.-. .| .+.+ +- .+|++|++.-.+.... .+......+.+||+. +.+
T Consensus 161 t~~~~~~i~~g~-----~p-~~i~-~~-----------~dG~l~v~~~~~~~~~------~~~~~~~~v~~id~~--t~~ 214 (328)
T 3dsm_A 161 TDKVVDELTIGI-----QP-TSLV-MD-----------KYNKMWTITDGGYEGS------PYGYEAPSLYRIDAE--TFT 214 (328)
T ss_dssp TTEEEEEEECSS-----CB-CCCE-EC-----------TTSEEEEEBCCBCTTC------SSCBCCCEEEEEETT--TTE
T ss_pred CCeEEEEEEcCC-----Cc-cceE-Ec-----------CCCCEEEEECCCccCC------ccccCCceEEEEECC--CCe
Confidence 998775443211 12 1222 21 2689888864321000 000013467888874 344
Q ss_pred eeee-ccCCCceeceeEEecCC-cEEEEcCcCCCCCCcccCCCCCCccEEEcCCCCCCCceEecCCCCC-CccceeeEee
Q 039705 309 WQRE-MMPSPRVMGEMLLLPTG-DVLIINGAKKGTAGWNFATDPNTTPVLYEPDDPINERFSELTPTSK-PRMCHSTSVV 385 (539)
Q Consensus 309 W~~~-~M~~~R~~~~~vvlpdG-~I~vvGG~~~g~~g~~~~~~~~~~~e~YdP~t~~g~~Wt~~a~~~~-~R~yhs~a~l 385 (539)
.... .++....-.+.+.-||| ++|+.++ ++.+||+++. +.....-.+. ...-.+++ +
T Consensus 215 v~~~~~~~~g~~p~~la~~~d~~~lyv~~~----------------~v~~~d~~t~---~~~~~~~~~~~~~~p~gi~-v 274 (328)
T 3dsm_A 215 VEKQFKFKLGDWPSEVQLNGTRDTLYWINN----------------DIWRMPVEAD---RVPVRPFLEFRDTKYYGLT-V 274 (328)
T ss_dssp EEEEEECCTTCCCEEEEECTTSCEEEEESS----------------SEEEEETTCS---SCCSSCSBCCCSSCEEEEE-E
T ss_pred EEEEEecCCCCCceeEEEecCCCEEEEEcc----------------EEEEEECCCC---ceeeeeeecCCCCceEEEE-E
Confidence 4432 44432222233445654 5666543 3578999887 5422111111 22333444 4
Q ss_pred CC-CCeEEEecCCCCCCCccCCCCCCCcceeeEEecCC
Q 039705 386 LP-DGKILVAGSNPHSRYNLTSGSKYPTELRIEKFYPP 422 (539)
Q Consensus 386 lp-dG~V~v~GG~~~~~~~~~~~~~~p~~~~vE~y~Pp 422 (539)
-| +|+|||+...... ...+|.+|+|.
T Consensus 275 dp~~g~lyva~~~~y~-----------~~~~V~v~d~~ 301 (328)
T 3dsm_A 275 NPNNGEVYVADAIDYQ-----------QQGIVYRYSPQ 301 (328)
T ss_dssp CTTTCCEEEEECTTSS-----------SEEEEEEECTT
T ss_pred cCCCCeEEEEcccccc-----------cCCEEEEECCC
Confidence 56 8999999632111 14578899886
No 20
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=97.99 E-value=0.0019 Score=64.75 Aligned_cols=249 Identities=14% Similarity=0.150 Sum_probs=127.1
Q ss_pred eEEEEECCCCCEEeCccCCCcccccceecCCCcEEEecCCCCCCCeEEEEeCCCCccc--eeecccccccccccce-eEE
Q 039705 81 LAVEYDAESAAIRPLKILTDTWSSSGGLSANGTIVISGGWSSRGRSVRYLSGCYHACY--WKEHHWELSAKRWFST-QHI 157 (539)
Q Consensus 81 ~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydP~~~t~~--W~~~~~~m~~~R~y~s-~~~ 157 (539)
...+||..+.+-...-..+..........++|+.+++||.. ..+++||.. +.. ...... +......-. +..
T Consensus 78 ~v~iWd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d---~~v~iw~~~--~~~~~~~~~~~-~~~h~~~v~~~~~ 151 (340)
T 1got_B 78 KLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLD---NICSIYNLK--TREGNVRVSRE-LAGHTGYLSCCRF 151 (340)
T ss_dssp EEEEEETTTCCEEEEEECSSSCEEEEEECTTSSEEEEEETT---CEEEEEETT--TCSBSCEEEEE-EECCSSCEEEEEE
T ss_pred cEEEEECCCCCcceEeecCCccEEEEEECCCCCEEEEEeCC---CeEEEEECc--cCCCcceeEEE-ecCCCccEEEEEE
Confidence 36688887766443322333222233556799999999863 678999976 321 211111 221111122 233
Q ss_pred ccCCcEEEEcCccCCeEEEE-ecCCCcceeeccCccccCCCCCCCCcceEEEeeCCcEEEEEcC--ceeEeeCCCCeEEE
Q 039705 158 LPDGSFIVVGGRREFSYEYI-LKEGKRIIYDLPILNETTNPSENNLYPFVFLSTDGNLFIFAND--RSILLNPETNEILH 234 (539)
Q Consensus 158 L~dG~VyvvGG~~~~~~E~y-P~~~~~~w~~~~~l~~~~~~~~~~~yp~~~~~~~G~Iyv~Gg~--~~e~yDp~tn~W~~ 234 (539)
..+++ ++.|+.+ .++.+| ..+. +... .+..... . --.+...++|++++.|+. .+.+||.++.+-.+
T Consensus 152 ~~~~~-l~s~s~d-~~i~~wd~~~~--~~~~--~~~~h~~----~-v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~~~~ 220 (340)
T 1got_B 152 LDDNQ-IVTSSGD-TTCALWDIETG--QQTT--TFTGHTG----D-VMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQ 220 (340)
T ss_dssp EETTE-EEEEETT-SCEEEEETTTT--EEEE--EECCCSS----C-EEEEEECTTSSEEEEEETTSCEEEEETTTCSEEE
T ss_pred CCCCc-EEEEECC-CcEEEEECCCC--cEEE--EEcCCCC----c-eEEEEECCCCCEEEEEeCCCcEEEEECCCCeeEE
Confidence 44565 4555544 456677 4443 2211 0111100 0 012234468999999875 47889998876443
Q ss_pred EcccCCCCCCccCCCccEEecccccCCCCCCCcccEEEEecCCCCCcccccCCCcccccCCceEEEEeeCCCCceeee-c
Q 039705 235 VFPILRGGSRNYPASATSALLPIKLQDPNSNAIRAEVLICGGAKPEAGVLAGKGEFMNALQDCGRIEITNKSATWQRE-M 313 (539)
Q Consensus 235 ~~p~mp~~~r~yp~~g~av~lpl~~~~~~~~~~~g~Iyv~GG~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~-~ 313 (539)
.+ .. .... --+....| +++.+++|+.+. .+..+|+.. .+-... .
T Consensus 221 ~~---~~-h~~~--v~~v~~~p-----------~~~~l~s~s~d~----------------~v~iwd~~~--~~~~~~~~ 265 (340)
T 1got_B 221 TF---TG-HESD--INAICFFP-----------NGNAFATGSDDA----------------TCRLFDLRA--DQELMTYS 265 (340)
T ss_dssp EE---CC-CSSC--EEEEEECT-----------TSSEEEEEETTS----------------CEEEEETTT--TEEEEEEC
T ss_pred EE---cC-CcCC--EEEEEEcC-----------CCCEEEEEcCCC----------------cEEEEECCC--CcEEEEEc
Confidence 22 21 1110 01112222 678888888652 345666542 111111 1
Q ss_pred cCCC-ceeceeEEecCCcEEEEcCcCCCCCCcccCCCCCCccEEEcCCCCCCCceEecCCCCCCccceeeEeeCCCCeEE
Q 039705 314 MPSP-RVMGEMLLLPTGDVLIINGAKKGTAGWNFATDPNTTPVLYEPDDPINERFSELTPTSKPRMCHSTSVVLPDGKIL 392 (539)
Q Consensus 314 M~~~-R~~~~~vvlpdG~I~vvGG~~~g~~g~~~~~~~~~~~e~YdP~t~~g~~Wt~~a~~~~~R~yhs~a~llpdG~V~ 392 (539)
.... ..-.....-|||+++++|+.+ + .+.+||..+.. .-..+... ..+. ....+.|||+.+
T Consensus 266 ~~~~~~~v~~~~~s~~g~~l~~g~~d-~------------~i~vwd~~~~~--~~~~~~~h-~~~v--~~~~~s~dg~~l 327 (340)
T 1got_B 266 HDNIICGITSVSFSKSGRLLLAGYDD-F------------NCNVWDALKAD--RAGVLAGH-DNRV--SCLGVTDDGMAV 327 (340)
T ss_dssp CTTCCSCEEEEEECTTSSEEEEEETT-S------------EEEEEETTTCC--EEEEEECC-SSCE--EEEEECTTSSCE
T ss_pred cCCcccceEEEEECCCCCEEEEECCC-C------------eEEEEEcccCc--EeeEeecC-CCcE--EEEEEcCCCCEE
Confidence 1110 011223456899999998865 2 57899987651 22222211 1111 223457999999
Q ss_pred EecCCCC
Q 039705 393 VAGSNPH 399 (539)
Q Consensus 393 v~GG~~~ 399 (539)
++||.+.
T Consensus 328 ~s~s~D~ 334 (340)
T 1got_B 328 ATGSWDS 334 (340)
T ss_dssp EEEETTS
T ss_pred EEEcCCc
Confidence 9998643
No 21
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=97.98 E-value=0.0052 Score=60.21 Aligned_cols=246 Identities=11% Similarity=0.092 Sum_probs=128.2
Q ss_pred EEEEECCCCCEEeCccCCCcccccceecCCCcEEEecCCCCCCCeEEEEeCCCCccceeecccccccccc-cceeEEccC
Q 039705 82 AVEYDAESAAIRPLKILTDTWSSSGGLSANGTIVISGGWSSRGRSVRYLSGCYHACYWKEHHWELSAKRW-FSTQHILPD 160 (539)
Q Consensus 82 ~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydP~~~t~~W~~~~~~m~~~R~-y~s~~~L~d 160 (539)
..+||..+++....-..+......-...++|+++++|+.+ ..+++||.. +.+-.. . +..... -.+...-++
T Consensus 47 i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d---~~i~vwd~~--~~~~~~--~-~~~~~~~v~~~~~~~~ 118 (312)
T 4ery_A 47 IKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDD---KTLKIWDVS--SGKCLK--T-LKGHSNYVFCCNFNPQ 118 (312)
T ss_dssp EEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETT---SEEEEEETT--TCCEEE--E-EECCSSCEEEEEECSS
T ss_pred EEEEeCCCcccchhhccCCCceEEEEEcCCCCEEEEECCC---CEEEEEECC--CCcEEE--E-EcCCCCCEEEEEEcCC
Confidence 5678887777655433333323334456799999999863 679999987 443211 1 221111 123344568
Q ss_pred CcEEEEcCccCCeEEEE-ecCCCcce-eeccCccccCCCCCCCCcceEEEeeCCcEEEEEcC--ceeEeeCCCCeEEEEc
Q 039705 161 GSFIVVGGRREFSYEYI-LKEGKRII-YDLPILNETTNPSENNLYPFVFLSTDGNLFIFAND--RSILLNPETNEILHVF 236 (539)
Q Consensus 161 G~VyvvGG~~~~~~E~y-P~~~~~~w-~~~~~l~~~~~~~~~~~yp~~~~~~~G~Iyv~Gg~--~~e~yDp~tn~W~~~~ 236 (539)
++.++.|+.++ .+.+| ..+. +- .... .... . --.....++|++++.|+. .+.+||..+.+....+
T Consensus 119 ~~~l~s~~~d~-~i~iwd~~~~--~~~~~~~---~~~~----~-v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~ 187 (312)
T 4ery_A 119 SNLIVSGSFDE-SVRIWDVKTG--KCLKTLP---AHSD----P-VSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL 187 (312)
T ss_dssp SSEEEEEETTS-CEEEEETTTC--CEEEEEC---CCSS----C-EEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEE
T ss_pred CCEEEEEeCCC-cEEEEECCCC--EEEEEec---CCCC----c-EEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeeEE
Confidence 88988888764 46667 4432 21 1111 1000 0 001233468999988875 4788999887654322
Q ss_pred ccCCCCCCccCCCccEEecccccCCCCCCCcccEEEEecCCCCCcccccCCCcccccCCceEEEEeeCCCCceeeecc-C
Q 039705 237 PILRGGSRNYPASATSALLPIKLQDPNSNAIRAEVLICGGAKPEAGVLAGKGEFMNALQDCGRIEITNKSATWQREMM-P 315 (539)
Q Consensus 237 p~mp~~~r~yp~~g~av~lpl~~~~~~~~~~~g~Iyv~GG~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~~M-~ 315 (539)
..- ...+ .....+ . .+++.+++|+.+. .+..+|+............ .
T Consensus 188 ~~~----~~~~-~~~~~~---~--------~~~~~l~~~~~d~----------------~i~iwd~~~~~~~~~~~~~~~ 235 (312)
T 4ery_A 188 IDD----DNPP-VSFVKF---S--------PNGKYILAATLDN----------------TLKLWDYSKGKCLKTYTGHKN 235 (312)
T ss_dssp CCS----SCCC-EEEEEE---C--------TTSSEEEEEETTT----------------EEEEEETTTTEEEEEECSSCC
T ss_pred ecc----CCCc-eEEEEE---C--------CCCCEEEEEcCCC----------------eEEEEECCCCcEEEEEEecCC
Confidence 111 1100 011122 1 1667778877541 3455665421100111111 1
Q ss_pred CCceeceeEEecCCcEEEEcCcCCCCCCcccCCCCCCccEEEcCCCCCCCce-EecCCCCCCccceeeEeeCCCCeEEEe
Q 039705 316 SPRVMGEMLLLPTGDVLIINGAKKGTAGWNFATDPNTTPVLYEPDDPINERF-SELTPTSKPRMCHSTSVVLPDGKILVA 394 (539)
Q Consensus 316 ~~R~~~~~vvlpdG~I~vvGG~~~g~~g~~~~~~~~~~~e~YdP~t~~g~~W-t~~a~~~~~R~yhs~a~llpdG~V~v~ 394 (539)
...........++++.++.|+.+ | ++.+||.++. +- ..+... .... ......|++++++.
T Consensus 236 ~~~~~~~~~~~~~~~~l~sg~~d-g------------~i~vwd~~~~---~~~~~~~~h-~~~v--~~~~~~p~~~~l~s 296 (312)
T 4ery_A 236 EKYCIFANFSVTGGKWIVSGSED-N------------LVYIWNLQTK---EIVQKLQGH-TDVV--ISTACHPTENIIAS 296 (312)
T ss_dssp SSSCCCEEEECSSSCEEEECCTT-S------------CEEEEETTTC---CEEEEECCC-SSCE--EEEEECSSSSEEEE
T ss_pred ceEEEEEEEEeCCCcEEEEECCC-C------------EEEEEECCCc---hhhhhhhcc-CCcE--EEEeecCcCCceEE
Confidence 11111122334688999988865 2 5789998876 42 222211 1111 12345789999998
Q ss_pred cCC
Q 039705 395 GSN 397 (539)
Q Consensus 395 GG~ 397 (539)
++.
T Consensus 297 ~~~ 299 (312)
T 4ery_A 297 AAL 299 (312)
T ss_dssp EEC
T ss_pred EEc
Confidence 864
No 22
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=97.94 E-value=0.0013 Score=64.65 Aligned_cols=219 Identities=10% Similarity=0.040 Sum_probs=122.9
Q ss_pred CCcEEEecCCCCCCCeEEEEeCCCCccceeecccccccccccceeEEccCCcEEEEcCccCCeEEEE-ecCCCcceeecc
Q 039705 111 NGTIVISGGWSSRGRSVRYLSGCYHACYWKEHHWELSAKRWFSTQHILPDGSFIVVGGRREFSYEYI-LKEGKRIIYDLP 189 (539)
Q Consensus 111 dG~l~v~GG~~~g~~~v~~ydP~~~t~~W~~~~~~m~~~R~y~s~~~L~dG~VyvvGG~~~~~~E~y-P~~~~~~w~~~~ 189 (539)
.|+++++|.. ...+.++|+++++-.|+.-.. .....+.+..++||++|+.+ ...+..| | ++...|....
T Consensus 4 ~~~~lv~~~~---~~~v~~~d~~tG~~~w~~~~~---~~~~~~~~~~~pdG~ilvs~---~~~V~~~d~-~G~~~W~~~~ 73 (276)
T 3no2_A 4 PQHLLVGGSG---WNKIAIINKDTKEIVWEYPLE---KGWECNSVAATKAGEILFSY---SKGAKMITR-DGRELWNIAA 73 (276)
T ss_dssp CCEEEEECTT---CSEEEEEETTTTEEEEEEECC---TTCCCCEEEECTTSCEEEEC---BSEEEEECT-TSCEEEEEEC
T ss_pred CCcEEEeeCC---CCEEEEEECCCCeEEEEeCCC---ccCCCcCeEECCCCCEEEeC---CCCEEEECC-CCCEEEEEcC
Confidence 5688888754 378899999644456764321 11234567788999999943 2456666 6 4433464221
Q ss_pred CccccCCCCCCCCcceEEEeeCCcEEEEEcC---ceeEeeCCCCe-EEEEccc-CCCCCCccCCCccEEecccccCCCCC
Q 039705 190 ILNETTNPSENNLYPFVFLSTDGNLFIFAND---RSILLNPETNE-ILHVFPI-LRGGSRNYPASATSALLPIKLQDPNS 264 (539)
Q Consensus 190 ~l~~~~~~~~~~~yp~~~~~~~G~Iyv~Gg~---~~e~yDp~tn~-W~~~~p~-mp~~~r~yp~~g~av~lpl~~~~~~~ 264 (539)
. .. . ..+ .+..++||++++.... .+..+|+.... |+..+.. ++. ....+ .+.+. +
T Consensus 74 ~--~~-~----~~~-~~~~~~dG~~lv~~~~~~~~v~~vd~~Gk~l~~~~~~~~~~~-~~~~~-~~v~~-~--------- 133 (276)
T 3no2_A 74 P--AG-C----EMQ-TARILPDGNALVAWCGHPSTILEVNMKGEVLSKTEFETGIER-PHAQF-RQINK-N--------- 133 (276)
T ss_dssp C--TT-C----EEE-EEEECTTSCEEEEEESTTEEEEEECTTSCEEEEEEECCSCSS-GGGSC-SCCEE-C---------
T ss_pred C--CC-c----ccc-ccEECCCCCEEEEecCCCCEEEEEeCCCCEEEEEeccCCCCc-ccccc-cCceE-C---------
Confidence 0 00 0 001 2345679999988643 46678885442 3312211 111 10111 12232 2
Q ss_pred CCcccEEEEecCCCCCcccccCCCcccccCCceEEEEeeCCCCceeeeccCCCceeceeEEecCCcEEEEcCcCCCCCCc
Q 039705 265 NAIRAEVLICGGAKPEAGVLAGKGEFMNALQDCGRIEITNKSATWQREMMPSPRVMGEMLLLPTGDVLIINGAKKGTAGW 344 (539)
Q Consensus 265 ~~~~g~Iyv~GG~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~~M~~~R~~~~~vvlpdG~I~vvGG~~~g~~g~ 344 (539)
.+|.++++...+ ..+.+||+. ..-.|+...-..+ +++..+++|.++|++...
T Consensus 134 --~~G~~lv~~~~~----------------~~v~~~d~~-G~~~w~~~~~~~~---~~~~~~~~g~~~v~~~~~------ 185 (276)
T 3no2_A 134 --KKGNYLVPLFAT----------------SEVREIAPN-GQLLNSVKLSGTP---FSSAFLDNGDCLVACGDA------ 185 (276)
T ss_dssp --TTSCEEEEETTT----------------TEEEEECTT-SCEEEEEECSSCC---CEEEECTTSCEEEECBTT------
T ss_pred --CCCCEEEEecCC----------------CEEEEECCC-CCEEEEEECCCCc---cceeEcCCCCEEEEeCCC------
Confidence 267777775432 246778875 3567887521112 235678899999987643
Q ss_pred ccCCCCCCccEEEcCCCCCCCceEecCC-CCCCcc-ceeeEeeCCCCeEEEec
Q 039705 345 NFATDPNTTPVLYEPDDPINERFSELTP-TSKPRM-CHSTSVVLPDGKILVAG 395 (539)
Q Consensus 345 ~~~~~~~~~~e~YdP~t~~g~~Wt~~a~-~~~~R~-yhs~a~llpdG~V~v~G 395 (539)
..+..+||++.. ..|+.-.. ..-.|+ +.+.+.+++||.|||+.
T Consensus 186 -------~~v~~~d~~tG~-~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~ 230 (276)
T 3no2_A 186 -------HCFVQLNLESNR-IVRRVNANDIEGVQLFFVAQLFPLQNGGLYICN 230 (276)
T ss_dssp -------SEEEEECTTTCC-EEEEEEGGGSBSCCCSEEEEEEECTTSCEEEEE
T ss_pred -------CeEEEEeCcCCc-EEEEecCCCCCCccccccccceEcCCCCEEEEe
Confidence 157899999761 14765321 122233 33456678999999997
No 23
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=97.88 E-value=0.0055 Score=61.10 Aligned_cols=243 Identities=11% Similarity=0.086 Sum_probs=129.6
Q ss_pred EEEEECCCCCEEeCcc--CCCcccccceecCCCcEEEecCCCCCCCeEEEEeCCCCccceeecccccccc-cccceeEEc
Q 039705 82 AVEYDAESAAIRPLKI--LTDTWSSSGGLSANGTIVISGGWSSRGRSVRYLSGCYHACYWKEHHWELSAK-RWFSTQHIL 158 (539)
Q Consensus 82 ~~~yDp~t~~w~~l~~--~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydP~~~t~~W~~~~~~m~~~-R~y~s~~~L 158 (539)
+.+||..+.+...... .+...........++.++++|+.+ ..+++||.. +.+-... +... ..-.+.+.-
T Consensus 60 v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~~~~~l~s~s~D---~~i~lWd~~--~~~~~~~---~~~~~~~~~~~~~s 131 (321)
T 3ow8_A 60 VKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASSSLD---AHIRLWDLE--NGKQIKS---IDAGPVDAWTLAFS 131 (321)
T ss_dssp EEEEEEETTEEEEEEEECCCSSCEEEEEECSSSSEEEEEETT---SEEEEEETT--TTEEEEE---EECCTTCCCCEEEC
T ss_pred EEEEECCCCCeeeeeeeccCCCCEEEEEECCCCCEEEEEeCC---CcEEEEECC--CCCEEEE---EeCCCccEEEEEEC
Confidence 5567766554432211 122212222345688899998863 689999987 4432211 2111 112245566
Q ss_pred cCCcEEEEcCccCCeEEEE-ecCCCccee-eccCccccCCCCCCCCcceEEEeeCCcEEEEEcC--ceeEeeCCCCeEEE
Q 039705 159 PDGSFIVVGGRREFSYEYI-LKEGKRIIY-DLPILNETTNPSENNLYPFVFLSTDGNLFIFAND--RSILLNPETNEILH 234 (539)
Q Consensus 159 ~dG~VyvvGG~~~~~~E~y-P~~~~~~w~-~~~~l~~~~~~~~~~~yp~~~~~~~G~Iyv~Gg~--~~e~yDp~tn~W~~ 234 (539)
+||+.+++|+.++ .+.+| ..+. +-. ... .... .--.+...++|+.++.|+. .+.+||.++++-.+
T Consensus 132 pdg~~l~~g~~dg-~v~i~~~~~~--~~~~~~~---~~~~-----~v~~~~~spdg~~lasg~~dg~i~iwd~~~~~~~~ 200 (321)
T 3ow8_A 132 PDSQYLATGTHVG-KVNIFGVESG--KKEYSLD---TRGK-----FILSIAYSPDGKYLASGAIDGIINIFDIATGKLLH 200 (321)
T ss_dssp TTSSEEEEECTTS-EEEEEETTTC--SEEEEEE---CSSS-----CEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEE
T ss_pred CCCCEEEEEcCCC-cEEEEEcCCC--ceeEEec---CCCc-----eEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEE
Confidence 7999999988753 45666 3332 111 111 1000 0012234579999999875 47889999887553
Q ss_pred EcccCCCCCCccCCCccEEecccccCCCCCCCcccEEEEecCCCCCcccccCCCcccccCCceEEEEeeCCCCceeee-c
Q 039705 235 VFPILRGGSRNYPASATSALLPIKLQDPNSNAIRAEVLICGGAKPEAGVLAGKGEFMNALQDCGRIEITNKSATWQRE-M 313 (539)
Q Consensus 235 ~~p~mp~~~r~yp~~g~av~lpl~~~~~~~~~~~g~Iyv~GG~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~-~ 313 (539)
.+ .. ... + --....-| +++++++|+.+. .+..+|+.. ...... .
T Consensus 201 ~~---~~-h~~-~-v~~l~~sp-----------d~~~l~s~s~dg----------------~i~iwd~~~--~~~~~~~~ 245 (321)
T 3ow8_A 201 TL---EG-HAM-P-IRSLTFSP-----------DSQLLVTASDDG----------------YIKIYDVQH--ANLAGTLS 245 (321)
T ss_dssp EE---CC-CSS-C-CCEEEECT-----------TSCEEEEECTTS----------------CEEEEETTT--CCEEEEEC
T ss_pred EE---cc-cCC-c-eeEEEEcC-----------CCCEEEEEcCCC----------------eEEEEECCC--cceeEEEc
Confidence 33 22 111 0 01122222 678889988652 355676542 222111 1
Q ss_pred cCCCceeceeEEecCCcEEEEcCcCCCCCCcccCCCCCCccEEEcCCCCCCCceE-ecCCCCCCccceeeEeeCCCCeEE
Q 039705 314 MPSPRVMGEMLLLPTGDVLIINGAKKGTAGWNFATDPNTTPVLYEPDDPINERFS-ELTPTSKPRMCHSTSVVLPDGKIL 392 (539)
Q Consensus 314 M~~~R~~~~~vvlpdG~I~vvGG~~~g~~g~~~~~~~~~~~e~YdP~t~~g~~Wt-~~a~~~~~R~yhs~a~llpdG~V~ 392 (539)
-...... +....|||+.++.|+.+ + ++.+||..+. +-. .+... ... -....+.|||+.+
T Consensus 246 ~h~~~v~-~~~~sp~~~~l~s~s~D-~------------~v~iwd~~~~---~~~~~~~~h-~~~--v~~v~~s~~g~~l 305 (321)
T 3ow8_A 246 GHASWVL-NVAFCPDDTHFVSSSSD-K------------SVKVWDVGTR---TCVHTFFDH-QDQ--VWGVKYNGNGSKI 305 (321)
T ss_dssp CCSSCEE-EEEECTTSSEEEEEETT-S------------CEEEEETTTT---EEEEEECCC-SSC--EEEEEECTTSSEE
T ss_pred CCCCceE-EEEECCCCCEEEEEeCC-C------------cEEEEeCCCC---EEEEEEcCC-CCc--EEEEEECCCCCEE
Confidence 1222222 33456899999998876 2 6789998876 322 22111 111 1234467999999
Q ss_pred EecCCC
Q 039705 393 VAGSNP 398 (539)
Q Consensus 393 v~GG~~ 398 (539)
++||.+
T Consensus 306 ~s~~~d 311 (321)
T 3ow8_A 306 VSVGDD 311 (321)
T ss_dssp EEEETT
T ss_pred EEEeCC
Confidence 998863
No 24
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=97.83 E-value=0.0052 Score=61.23 Aligned_cols=134 Identities=9% Similarity=0.051 Sum_probs=72.9
Q ss_pred EEEEECCCCCEEeCccC--CCcccccceecCCCcEEEecCCCCCCCeEEEEeCCCCccceeecccccc-cccccceeEEc
Q 039705 82 AVEYDAESAAIRPLKIL--TDTWSSSGGLSANGTIVISGGWSSRGRSVRYLSGCYHACYWKEHHWELS-AKRWFSTQHIL 158 (539)
Q Consensus 82 ~~~yDp~t~~w~~l~~~--~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydP~~~t~~W~~~~~~m~-~~R~y~s~~~L 158 (539)
..+||..++++..+... +..........++|+++++|+.. ..+.+||.. +.++..... +. ....-.+.+..
T Consensus 32 v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d---g~i~vwd~~--~~~~~~~~~-~~~~~~~v~~~~~~ 105 (372)
T 1k8k_C 32 VHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTD---RNAYVWTLK--GRTWKPTLV-ILRINRAARCVRWA 105 (372)
T ss_dssp EEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETT---SCEEEEEEE--TTEEEEEEE-CCCCSSCEEEEEEC
T ss_pred EEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCC---CeEEEEECC--CCeeeeeEE-eecCCCceeEEEEC
Confidence 56788888765544332 22222233456789999998853 568899987 666544322 21 22222344455
Q ss_pred cCCcEEEEcCccCCeEEEE-ecCCCcceee-ccCccccCCCCCCCCcceEEEeeCCcEEEEEcC--ceeEeeCC
Q 039705 159 PDGSFIVVGGRREFSYEYI-LKEGKRIIYD-LPILNETTNPSENNLYPFVFLSTDGNLFIFAND--RSILLNPE 228 (539)
Q Consensus 159 ~dG~VyvvGG~~~~~~E~y-P~~~~~~w~~-~~~l~~~~~~~~~~~yp~~~~~~~G~Iyv~Gg~--~~e~yDp~ 228 (539)
++|+.+++|+.++ .+.+| .... ..|.. ......... . --.....++|++++.|+. .+.+||..
T Consensus 106 ~~~~~l~~~~~d~-~v~i~d~~~~-~~~~~~~~~~~~~~~----~-i~~~~~~~~~~~l~~~~~dg~i~~~d~~ 172 (372)
T 1k8k_C 106 PNEKKFAVGSGSR-VISICYFEQE-NDWWVCKHIKKPIRS----T-VLSLDWHPNSVLLAAGSCDFKCRIFSAY 172 (372)
T ss_dssp TTSSEEEEEETTS-SEEEEEEETT-TTEEEEEEECTTCCS----C-EEEEEECTTSSEEEEEETTSCEEEEECC
T ss_pred CCCCEEEEEeCCC-EEEEEEecCC-CcceeeeeeecccCC----C-eeEEEEcCCCCEEEEEcCCCCEEEEEcc
Confidence 6899999888764 45566 4332 12321 111111000 0 011233468998888875 46788854
No 25
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=97.82 E-value=0.0062 Score=59.51 Aligned_cols=245 Identities=13% Similarity=0.098 Sum_probs=129.5
Q ss_pred eEEEEECCCCCEE----eCcc-CCCcccccceecCCCcEEEecCCCCCCCeEEEEeCCCCccceeeccccccccc-ccce
Q 039705 81 LAVEYDAESAAIR----PLKI-LTDTWSSSGGLSANGTIVISGGWSSRGRSVRYLSGCYHACYWKEHHWELSAKR-WFST 154 (539)
Q Consensus 81 ~~~~yDp~t~~w~----~l~~-~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydP~~~t~~W~~~~~~m~~~R-~y~s 154 (539)
...+||..+++.. .+.. .+..........++|+.+++|+.. ..+.+||.. +.+...... +.... .-.+
T Consensus 73 ~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---~~i~~~d~~--~~~~~~~~~-~~~~~~~i~~ 146 (337)
T 1gxr_A 73 CVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEA---STLSIWDLA--APTPRIKAE-LTSSAPACYA 146 (337)
T ss_dssp EEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESS---SEEEEEECC--CC--EEEEE-EECSSSCEEE
T ss_pred eEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEcCC---CcEEEEECC--CCCcceeee-cccCCCceEE
Confidence 3567888765422 1111 122222233456789999998753 579999987 555433222 22221 1223
Q ss_pred eEEccCCcEEEEcCccCCeEEEE-ecCCCccee-eccCccccCCCCCCCCcceEEEeeCCcEEEEEcC--ceeEeeCCCC
Q 039705 155 QHILPDGSFIVVGGRREFSYEYI-LKEGKRIIY-DLPILNETTNPSENNLYPFVFLSTDGNLFIFAND--RSILLNPETN 230 (539)
Q Consensus 155 ~~~L~dG~VyvvGG~~~~~~E~y-P~~~~~~w~-~~~~l~~~~~~~~~~~yp~~~~~~~G~Iyv~Gg~--~~e~yDp~tn 230 (539)
.+..++++.+++|+.++ .+.+| ..+. +.. ... .... . --.....++|+.++.++. .+.+||.++.
T Consensus 147 ~~~~~~~~~l~~~~~dg-~v~~~d~~~~--~~~~~~~---~~~~----~-i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~ 215 (337)
T 1gxr_A 147 LAISPDSKVCFSCCSDG-NIAVWDLHNQ--TLVRQFQ---GHTD----G-ASCIDISNDGTKLWTGGLDNTVRSWDLREG 215 (337)
T ss_dssp EEECTTSSEEEEEETTS-CEEEEETTTT--EEEEEEC---CCSS----C-EEEEEECTTSSEEEEEETTSEEEEEETTTT
T ss_pred EEECCCCCEEEEEeCCC-cEEEEeCCCC--ceeeeee---cccC----c-eEEEEECCCCCEEEEEecCCcEEEEECCCC
Confidence 44566889988888754 46666 4432 221 111 1000 0 012233468988888875 4778999888
Q ss_pred eEEEEcccCCCCCCccCCCccEEecccccCCCCCCCcccEEEEecCCCCCcccccCCCcccccCCceEEEEeeCCCCcee
Q 039705 231 EILHVFPILRGGSRNYPASATSALLPIKLQDPNSNAIRAEVLICGGAKPEAGVLAGKGEFMNALQDCGRIEITNKSATWQ 310 (539)
Q Consensus 231 ~W~~~~p~mp~~~r~yp~~g~av~lpl~~~~~~~~~~~g~Iyv~GG~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~ 310 (539)
+-.... ..+. .. ....+.| +++.+++|+.+ ..+..+|+... ....
T Consensus 216 ~~~~~~-~~~~--~v----~~~~~s~-----------~~~~l~~~~~~----------------~~i~~~~~~~~-~~~~ 260 (337)
T 1gxr_A 216 RQLQQH-DFTS--QI----FSLGYCP-----------TGEWLAVGMES----------------SNVEVLHVNKP-DKYQ 260 (337)
T ss_dssp EEEEEE-ECSS--CE----EEEEECT-----------TSSEEEEEETT----------------SCEEEEETTSS-CEEE
T ss_pred ceEeee-cCCC--ce----EEEEECC-----------CCCEEEEEcCC----------------CcEEEEECCCC-CeEE
Confidence 755322 1111 11 1122212 67778887754 13556776431 1111
Q ss_pred eeccCCCceeceeEEecCCcEEEEcCcCCCCCCcccCCCCCCccEEEcCCCCCCCceEecCCCCCCccceeeEeeCCCCe
Q 039705 311 REMMPSPRVMGEMLLLPTGDVLIINGAKKGTAGWNFATDPNTTPVLYEPDDPINERFSELTPTSKPRMCHSTSVVLPDGK 390 (539)
Q Consensus 311 ~~~M~~~R~~~~~vvlpdG~I~vvGG~~~g~~g~~~~~~~~~~~e~YdP~t~~g~~Wt~~a~~~~~R~yhs~a~llpdG~ 390 (539)
. .-..... ......+||+.+++++.+ | .+.+||.++. +-..... ....- ....+.|||+
T Consensus 261 ~-~~~~~~v-~~~~~~~~~~~l~~~~~d-g------------~i~~~~~~~~---~~~~~~~--~~~~v-~~~~~s~~~~ 319 (337)
T 1gxr_A 261 L-HLHESCV-LSLKFAYCGKWFVSTGKD-N------------LLNAWRTPYG---ASIFQSK--ESSSV-LSCDISVDDK 319 (337)
T ss_dssp E-CCCSSCE-EEEEECTTSSEEEEEETT-S------------EEEEEETTTC---CEEEEEE--CSSCE-EEEEECTTSC
T ss_pred E-cCCccce-eEEEECCCCCEEEEecCC-C------------cEEEEECCCC---eEEEEec--CCCcE-EEEEECCCCC
Confidence 1 1112222 234557899999988865 2 5789998887 4332111 11111 2244679999
Q ss_pred EEEecCCC
Q 039705 391 ILVAGSNP 398 (539)
Q Consensus 391 V~v~GG~~ 398 (539)
.+++|+.+
T Consensus 320 ~l~~~~~d 327 (337)
T 1gxr_A 320 YIVTGSGD 327 (337)
T ss_dssp EEEEEETT
T ss_pred EEEEecCC
Confidence 99998864
No 26
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=97.80 E-value=0.028 Score=53.98 Aligned_cols=239 Identities=13% Similarity=0.075 Sum_probs=119.2
Q ss_pred EEEEECCCCCEEeCccC-CCcccccceecCCCcEEEecCCCCCCCeEEEEeCCCCccceeecccccc-cccccceeEEcc
Q 039705 82 AVEYDAESAAIRPLKIL-TDTWSSSGGLSANGTIVISGGWSSRGRSVRYLSGCYHACYWKEHHWELS-AKRWFSTQHILP 159 (539)
Q Consensus 82 ~~~yDp~t~~w~~l~~~-~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydP~~~t~~W~~~~~~m~-~~R~y~s~~~L~ 159 (539)
...||+. ++++..... ......+-+...+|++++.... ...+..||+. .++.... ++ ....-.+.+.-+
T Consensus 38 v~~~d~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~---~~~i~~~~~~---g~~~~~~--~~~~~~~~~~i~~~~ 108 (299)
T 2z2n_A 38 ISCINLD-GKITEYPLPTPDAKVMCLTISSDGEVWFTENA---ANKIGRITKK---GIIKEYT--LPNPDSAPYGITEGP 108 (299)
T ss_dssp EEEECTT-CCEEEEECSSTTCCEEEEEECTTSCEEEEETT---TTEEEEECTT---SCEEEEE--CSSTTCCEEEEEECT
T ss_pred EEEEcCC-CCeEEecCCcccCceeeEEECCCCCEEEeCCC---CCeEEEECCC---CcEEEEe--CCCcCCCceeeEECC
Confidence 4567777 666654322 1112222334478999988542 2468889986 2333322 11 111222344445
Q ss_pred CCcEEEEcCccCCeEEEE-ecCCCcceeeccCccccCCCCCCCCcceEEE-eeCCcEEEEEc--CceeEeeCCCCeEEEE
Q 039705 160 DGSFIVVGGRREFSYEYI-LKEGKRIIYDLPILNETTNPSENNLYPFVFL-STDGNLFIFAN--DRSILLNPETNEILHV 235 (539)
Q Consensus 160 dG~VyvvGG~~~~~~E~y-P~~~~~~w~~~~~l~~~~~~~~~~~yp~~~~-~~~G~Iyv~Gg--~~~e~yDp~tn~W~~~ 235 (539)
||++|+..... ..+.++ + ++ +....... .. ...|...+ .++|+||+... ..+.+||+ +++.. .
T Consensus 109 ~g~l~v~~~~~-~~i~~~d~-~g--~~~~~~~~-~~------~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~-~ 175 (299)
T 2z2n_A 109 NGDIWFTEMNG-NRIGRITD-DG--KIREYELP-NK------GSYPSFITLGSDNALWFTENQNNAIGRITE-SGDIT-E 175 (299)
T ss_dssp TSCEEEEETTT-TEEEEECT-TC--CEEEEECS-ST------TCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEE-E
T ss_pred CCCEEEEecCC-ceEEEECC-CC--CEEEecCC-CC------CCCCceEEEcCCCCEEEEeCCCCEEEEEcC-CCcEE-E
Confidence 79999975432 345556 5 33 33211110 00 11334333 35899999763 45788999 67665 3
Q ss_pred cccCCCCCCccCCCccEEecccccCCCCCCCcccEEEEecCCCCCcccccCCCcccccCCceEEEEeeCCCCceeeeccC
Q 039705 236 FPILRGGSRNYPASATSALLPIKLQDPNSNAIRAEVLICGGAKPEAGVLAGKGEFMNALQDCGRIEITNKSATWQREMMP 315 (539)
Q Consensus 236 ~p~mp~~~r~yp~~g~av~lpl~~~~~~~~~~~g~Iyv~GG~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~~M~ 315 (539)
. .++. ....| ..+.+ . .+++||+..... ..+.+||+ + .++....++
T Consensus 176 ~-~~~~-~~~~~---~~i~~--~--------~~g~l~v~~~~~----------------~~i~~~~~-~--g~~~~~~~~ 221 (299)
T 2z2n_A 176 F-KIPT-PASGP---VGITK--G--------NDDALWFVEIIG----------------NKIGRITT-S--GEITEFKIP 221 (299)
T ss_dssp E-ECSS-TTCCE---EEEEE--C--------TTSSEEEEETTT----------------TEEEEECT-T--CCEEEEECS
T ss_pred e-eCCC-CCCcc---eeEEE--C--------CCCCEEEEccCC----------------ceEEEECC-C--CcEEEEECC
Confidence 3 1222 11111 12211 1 157888875322 23556665 2 333332222
Q ss_pred --CCceeceeEEecCCcEEEEcCcCCCCCCcccCCCCCCccEEEcCCCCCCCceEecCCCCCCccceeeEeeCCCCeEEE
Q 039705 316 --SPRVMGEMLLLPTGDVLIINGAKKGTAGWNFATDPNTTPVLYEPDDPINERFSELTPTSKPRMCHSTSVVLPDGKILV 393 (539)
Q Consensus 316 --~~R~~~~~vvlpdG~I~vvGG~~~g~~g~~~~~~~~~~~e~YdP~t~~g~~Wt~~a~~~~~R~yhs~a~llpdG~V~v 393 (539)
..+. .+.+.-++|+|||..... ..+.+||| +. +............-++.++ ++|++|+
T Consensus 222 ~~~~~~-~~i~~~~~g~l~v~~~~~-------------~~i~~~d~-~g---~~~~~~~~~~~~~~~~i~~--~~g~l~v 281 (299)
T 2z2n_A 222 TPNARP-HAITAGAGIDLWFTEWGA-------------NKIGRLTS-NN---IIEEYPIQIKSAEPHGICF--DGETIWF 281 (299)
T ss_dssp STTCCE-EEEEECSTTCEEEEETTT-------------TEEEEEET-TT---EEEEEECSSSSCCEEEEEE--CSSCEEE
T ss_pred CCCCCc-eeEEECCCCCEEEeccCC-------------ceEEEECC-CC---ceEEEeCCCCCCccceEEe--cCCCEEE
Confidence 1222 133445789999975322 14788998 44 5554321111122234444 8999999
Q ss_pred ecC
Q 039705 394 AGS 396 (539)
Q Consensus 394 ~GG 396 (539)
+..
T Consensus 282 ~~~ 284 (299)
T 2z2n_A 282 AME 284 (299)
T ss_dssp EET
T ss_pred Eec
Confidence 864
No 27
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=97.72 E-value=0.018 Score=56.87 Aligned_cols=269 Identities=9% Similarity=0.042 Sum_probs=131.2
Q ss_pred EEEEECCCCCEEeCccCCCcccccceecCCCcEEEecCCCCCCCeEEEEeCCCCccceeecccccccccccceeEEccCC
Q 039705 82 AVEYDAESAAIRPLKILTDTWSSSGGLSANGTIVISGGWSSRGRSVRYLSGCYHACYWKEHHWELSAKRWFSTQHILPDG 161 (539)
Q Consensus 82 ~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydP~~~t~~W~~~~~~m~~~R~y~s~~~L~dG 161 (539)
..+||..+.+....-..+..........++++.+++|+.. ..+.+||.. +.+.... +.....-.+.+..++|
T Consensus 56 i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d---g~i~iwd~~--~~~~~~~---~~~~~~v~~~~~~~~~ 127 (369)
T 3zwl_B 56 ASVWYSLNGERLGTLDGHTGTIWSIDVDCFTKYCVTGSAD---YSIKLWDVS--NGQCVAT---WKSPVPVKRVEFSPCG 127 (369)
T ss_dssp EEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETT---TEEEEEETT--TCCEEEE---EECSSCEEEEEECTTS
T ss_pred EEEEeCCCchhhhhhhhcCCcEEEEEEcCCCCEEEEEeCC---CeEEEEECC--CCcEEEE---eecCCCeEEEEEccCC
Confidence 5678887766544322222222233456789999998763 579999987 4433221 2222223345566789
Q ss_pred cEEEEcCcc----CCeEEEE-ecCCC--cceeecc--CccccCCCCCCCCcceEEEeeCCcEEEEEcC--ceeEeeCCC-
Q 039705 162 SFIVVGGRR----EFSYEYI-LKEGK--RIIYDLP--ILNETTNPSENNLYPFVFLSTDGNLFIFAND--RSILLNPET- 229 (539)
Q Consensus 162 ~VyvvGG~~----~~~~E~y-P~~~~--~~w~~~~--~l~~~~~~~~~~~yp~~~~~~~G~Iyv~Gg~--~~e~yDp~t- 229 (539)
+.+++++.+ ...+.+| ..... ..+.... ................+...++|+.+++|+. .+.+||..+
T Consensus 128 ~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~ 207 (369)
T 3zwl_B 128 NYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGHKDGKISKYDVSNN 207 (369)
T ss_dssp SEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCEEEEEETTSEEEEEETTTT
T ss_pred CEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEEcCCCCEEEEEcCCCEEEEEECCCC
Confidence 888888765 1355666 33220 0111000 0000000000001112234468988888875 477899988
Q ss_pred CeEEEEcccCCCCCCccCCCccEEecccccCCCCCCCcccEEEEecCCCCCcccccCCCcccccCCceEEEEeeCCCCce
Q 039705 230 NEILHVFPILRGGSRNYPASATSALLPIKLQDPNSNAIRAEVLICGGAKPEAGVLAGKGEFMNALQDCGRIEITNKSATW 309 (539)
Q Consensus 230 n~W~~~~p~mp~~~r~yp~~g~av~lpl~~~~~~~~~~~g~Iyv~GG~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W 309 (539)
.+....+ .. .... .......| +++.+++|+.+. .+..+|+.. .+.
T Consensus 208 ~~~~~~~---~~-~~~~--v~~~~~~~-----------~~~~l~~~~~d~----------------~i~v~d~~~--~~~ 252 (369)
T 3zwl_B 208 YEYVDSI---DL-HEKS--ISDMQFSP-----------DLTYFITSSRDT----------------NSFLVDVST--LQV 252 (369)
T ss_dssp TEEEEEE---EC-CSSC--EEEEEECT-----------TSSEEEEEETTS----------------EEEEEETTT--CCE
T ss_pred cEeEEEE---ec-CCCc--eeEEEECC-----------CCCEEEEecCCc----------------eEEEEECCC--Cce
Confidence 4433222 21 0010 01112211 567777776541 355677642 222
Q ss_pred eeeccCCCceeceeEEecCCcEEEEcCcCCCCCCccc-CCCCCCccEEEcCCCCCCCceEecCCCCCCccceeeEeeCCC
Q 039705 310 QREMMPSPRVMGEMLLLPTGDVLIINGAKKGTAGWNF-ATDPNTTPVLYEPDDPINERFSELTPTSKPRMCHSTSVVLPD 388 (539)
Q Consensus 310 ~~~~M~~~R~~~~~vvlpdG~I~vvGG~~~g~~g~~~-~~~~~~~~e~YdP~t~~g~~Wt~~a~~~~~R~yhs~a~llpd 388 (539)
... +............|+|+.+++++.+.+..-+.. .......+.+||..+.. .-..+... ... -....+.||
T Consensus 253 ~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~--~~~~~~~~-~~~--v~~~~~s~~ 326 (369)
T 3zwl_B 253 LKK-YETDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEE--EIGRVQGH-FGP--LNTVAISPQ 326 (369)
T ss_dssp EEE-EECSSCEEEEEECSSSSEEEEEECCC-------------CEEEEEETTTCC--EEEEEECC-SSC--EEEEEECTT
T ss_pred eee-ecCCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCc--chhheecc-cCc--EEEEEECCC
Confidence 211 111112223456789999999986521110000 01112257889987761 22222111 111 123456799
Q ss_pred CeEEEecCCCC
Q 039705 389 GKILVAGSNPH 399 (539)
Q Consensus 389 G~V~v~GG~~~ 399 (539)
|+.+++|+.+.
T Consensus 327 ~~~l~s~~~dg 337 (369)
T 3zwl_B 327 GTSYASGGEDG 337 (369)
T ss_dssp SSEEEEEETTS
T ss_pred CCEEEEEcCCC
Confidence 99999998643
No 28
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=97.71 E-value=0.046 Score=53.79 Aligned_cols=247 Identities=11% Similarity=0.092 Sum_probs=123.0
Q ss_pred eEEEEECCCCCEEeCccCCCcccccceecCCCc-EEEecCCCCCCCeEEEEeCCCCccceeeccccccccc--------c
Q 039705 81 LAVEYDAESAAIRPLKILTDTWSSSGGLSANGT-IVISGGWSSRGRSVRYLSGCYHACYWKEHHWELSAKR--------W 151 (539)
Q Consensus 81 ~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~-l~v~GG~~~g~~~v~~ydP~~~t~~W~~~~~~m~~~R--------~ 151 (539)
...+||+.+.+....-... ....+.++.+||+ +|+.+.. ...+.+||+. +.+-...-. +.... .
T Consensus 70 ~v~~~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~v~~~~---~~~v~~~d~~--~~~~~~~~~-~~~~~~~~~~~~~~ 142 (353)
T 3vgz_A 70 VVYRLDPVTLEVTQAIHND-LKPFGATINNTTQTLWFGNTV---NSAVTAIDAK--TGEVKGRLV-LDDRKRTEEVRPLQ 142 (353)
T ss_dssp EEEEECTTTCCEEEEEEES-SCCCSEEEETTTTEEEEEETT---TTEEEEEETT--TCCEEEEEE-SCCCCCCSSCCCCE
T ss_pred cEEEEcCCCCeEEEEEecC-CCcceEEECCCCCEEEEEecC---CCEEEEEeCC--CCeeEEEEe-cCCCccccccCCCC
Confidence 5678999888764432211 1122345567887 6666543 2589999997 444221111 11110 0
Q ss_pred cceeEEccCCc-EEEEcCccCCeEEEE-ecCCCccee-eccCccccCCCCCCCCcc-eEEEeeCCcEEEEEcC--ceeEe
Q 039705 152 FSTQHILPDGS-FIVVGGRREFSYEYI-LKEGKRIIY-DLPILNETTNPSENNLYP-FVFLSTDGNLFIFAND--RSILL 225 (539)
Q Consensus 152 y~s~~~L~dG~-VyvvGG~~~~~~E~y-P~~~~~~w~-~~~~l~~~~~~~~~~~yp-~~~~~~~G~Iyv~Gg~--~~e~y 225 (539)
-...+.-+||+ +|+.+......+.+| +.+. +-. ..+.... .| .....++|+.++++.. ...+|
T Consensus 143 ~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~--~~~~~~~~~~~---------~~~~~~~s~dg~~l~~~~~~~~i~~~ 211 (353)
T 3vgz_A 143 PRELVADDATNTVYISGIGKESVIWVVDGGNI--KLKTAIQNTGK---------MSTGLALDSEGKRLYTTNADGELITI 211 (353)
T ss_dssp EEEEEEETTTTEEEEEEESSSCEEEEEETTTT--EEEEEECCCCT---------TCCCCEEETTTTEEEEECTTSEEEEE
T ss_pred CceEEECCCCCEEEEEecCCCceEEEEcCCCC--ceEEEecCCCC---------ccceEEECCCCCEEEEEcCCCeEEEE
Confidence 12344555776 555542334456667 5443 221 1221100 11 1245578875555543 47789
Q ss_pred eCCCCeEEEEcccCCCCCCccCCCccEEecccccCCCCCCCcccEEEEecCCCCCcccccCCCcccccCCceEEEEeeCC
Q 039705 226 NPETNEILHVFPILRGGSRNYPASATSALLPIKLQDPNSNAIRAEVLICGGAKPEAGVLAGKGEFMNALQDCGRIEITNK 305 (539)
Q Consensus 226 Dp~tn~W~~~~p~mp~~~r~yp~~g~av~lpl~~~~~~~~~~~g~Iyv~GG~~~~~~~~~~~~~~~~a~~s~~~~d~~~~ 305 (539)
|..+++-.+.++.-..++..++ ...++-| .+..+|+....+ ..+..||+..
T Consensus 212 d~~~~~~~~~~~~~~~~~~~~~--~~~~~s~----------dg~~l~~~~~~~----------------~~v~~~d~~~- 262 (353)
T 3vgz_A 212 DTADNKILSRKKLLDDGKEHFF--INISLDT----------ARQRAFITDSKA----------------AEVLVVDTRN- 262 (353)
T ss_dssp ETTTTEEEEEEECCCSSSCCCE--EEEEEET----------TTTEEEEEESSS----------------SEEEEEETTT-
T ss_pred ECCCCeEEEEEEcCCCCCCccc--ceEEECC----------CCCEEEEEeCCC----------------CEEEEEECCC-
Confidence 9998876533322111112211 1122222 134576665321 2466788642
Q ss_pred CCceeee-ccCCCceeceeEEecCCc-EEEEcCcCCCCCCcccCCCCCCccEEEcCCCCCCCceEecCCCCCCccceeeE
Q 039705 306 SATWQRE-MMPSPRVMGEMLLLPTGD-VLIINGAKKGTAGWNFATDPNTTPVLYEPDDPINERFSELTPTSKPRMCHSTS 383 (539)
Q Consensus 306 ~~~W~~~-~M~~~R~~~~~vvlpdG~-I~vvGG~~~g~~g~~~~~~~~~~~e~YdP~t~~g~~Wt~~a~~~~~R~yhs~a 383 (539)
.+.... +.+.++ +...-+||+ +|+.+..+ ..+.+||.++. +....-+ ....-++ .
T Consensus 263 -~~~~~~~~~~~~~---~~~~s~dg~~l~v~~~~~-------------~~v~~~d~~~~---~~~~~~~--~~~~~~~-~ 319 (353)
T 3vgz_A 263 -GNILAKVAAPESL---AVLFNPARNEAYVTHRQA-------------GKVSVIDAKSY---KVVKTFD--TPTHPNS-L 319 (353)
T ss_dssp -CCEEEEEECSSCC---CEEEETTTTEEEEEETTT-------------TEEEEEETTTT---EEEEEEE--CCSEEEE-E
T ss_pred -CcEEEEEEcCCCc---eEEECCCCCEEEEEECCC-------------CeEEEEECCCC---eEEEEEe--cCCCCCe-E
Confidence 333322 444432 345578998 67765433 15789999887 5443211 1222233 3
Q ss_pred eeCCCCe-EEEecCC
Q 039705 384 VVLPDGK-ILVAGSN 397 (539)
Q Consensus 384 ~llpdG~-V~v~GG~ 397 (539)
.+.|||+ +||+...
T Consensus 320 ~~s~dg~~l~v~~~~ 334 (353)
T 3vgz_A 320 ALSADGKTLYVSVKQ 334 (353)
T ss_dssp EECTTSCEEEEEEEC
T ss_pred EEcCCCCEEEEEEcc
Confidence 4679998 7777654
No 29
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=97.69 E-value=0.0044 Score=61.01 Aligned_cols=218 Identities=10% Similarity=0.063 Sum_probs=113.1
Q ss_pred eEEEEECCCCCEEeCccCCCcccccceecCCCcEEEecCCCCCCCeEEEEeCCCCccceeeccccccc-ccccceeEEcc
Q 039705 81 LAVEYDAESAAIRPLKILTDTWSSSGGLSANGTIVISGGWSSRGRSVRYLSGCYHACYWKEHHWELSA-KRWFSTQHILP 159 (539)
Q Consensus 81 ~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydP~~~t~~W~~~~~~m~~-~R~y~s~~~L~ 159 (539)
...+||..+++....-..+........+.++++++++|+.+ ..+++||.. +.+-. .. +.. ...-.+.+.-+
T Consensus 36 ~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d---~~i~vwd~~--~~~~~--~~-~~~h~~~v~~~~~~~ 107 (304)
T 2ynn_A 36 RVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDD---FRIRVFNYN--TGEKV--VD-FEAHPDYIRSIAVHP 107 (304)
T ss_dssp EEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETT---SEEEEEETT--TCCEE--EE-EECCSSCEEEEEECS
T ss_pred cEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEECCC---CEEEEEECC--CCcEE--EE-EeCCCCcEEEEEEcC
Confidence 36678888765433222222222334567899999999863 689999987 44321 11 221 12223455567
Q ss_pred CCcEEEEcCccCCeEEEE-ecCCCcceeeccCccccCCCCCCCCcceEE-Eee-CCcEEEEEcCc--eeEeeCCCCeEEE
Q 039705 160 DGSFIVVGGRREFSYEYI-LKEGKRIIYDLPILNETTNPSENNLYPFVF-LST-DGNLFIFANDR--SILLNPETNEILH 234 (539)
Q Consensus 160 dG~VyvvGG~~~~~~E~y-P~~~~~~w~~~~~l~~~~~~~~~~~yp~~~-~~~-~G~Iyv~Gg~~--~e~yDp~tn~W~~ 234 (539)
+++.++.|+.+ .++.+| ..++ +.....+..... .-..+ ..+ ++++++.|+.+ +.+||..+.+-..
T Consensus 108 ~~~~l~sgs~D-~~v~lWd~~~~---~~~~~~~~~h~~------~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~~~~ 177 (304)
T 2ynn_A 108 TKPYVLSGSDD-LTVKLWNWENN---WALEQTFEGHEH------FVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNF 177 (304)
T ss_dssp SSSEEEEEETT-SCEEEEEGGGT---TEEEEEECCCCS------CEEEEEECTTCTTEEEEEETTSEEEEEETTCSSCSE
T ss_pred CCCEEEEECCC-CeEEEEECCCC---cchhhhhcccCC------cEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCccc
Confidence 88888888766 456677 3332 221111111110 11112 224 67888888754 7789986543211
Q ss_pred EcccCCCCCCccCCCccEEecccccCCCCCCCcccEEEEecCCCCCcccccCCCcccccCCceEEEEeeCCCCceeee-c
Q 039705 235 VFPILRGGSRNYPASATSALLPIKLQDPNSNAIRAEVLICGGAKPEAGVLAGKGEFMNALQDCGRIEITNKSATWQRE-M 313 (539)
Q Consensus 235 ~~p~mp~~~r~yp~~g~av~lpl~~~~~~~~~~~g~Iyv~GG~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~-~ 313 (539)
.+ ..+.... .......|. .++++++.|+.+. ++..+|+.. .+-... .
T Consensus 178 ~~---~~~~~~~--v~~~~~~~~---------~~~~~l~s~s~D~----------------~i~iWd~~~--~~~~~~~~ 225 (304)
T 2ynn_A 178 TL---TTGQERG--VNYVDYYPL---------PDKPYMITASDDL----------------TIKIWDYQT--KSCVATLE 225 (304)
T ss_dssp EE---ECCCTTC--EEEEEECCS---------TTCCEEEEEETTS----------------EEEEEETTT--TEEEEEEE
T ss_pred ee---ccCCcCc--EEEEEEEEc---------CCCCEEEEEcCCC----------------eEEEEeCCC--CccceeeC
Confidence 11 1101000 011112221 1567788887651 345566542 111111 1
Q ss_pred cCCCceeceeEEecCCcEEEEcCcCCCCCCcccCCCCCCccEEEcCCCC
Q 039705 314 MPSPRVMGEMLLLPTGDVLIINGAKKGTAGWNFATDPNTTPVLYEPDDP 362 (539)
Q Consensus 314 M~~~R~~~~~vvlpdG~I~vvGG~~~g~~g~~~~~~~~~~~e~YdP~t~ 362 (539)
-+..... .....|++++++.|+.+ + ++.+||.++.
T Consensus 226 ~h~~~v~-~~~~~p~~~~l~s~s~D-g------------~i~iWd~~~~ 260 (304)
T 2ynn_A 226 GHMSNVS-FAVFHPTLPIIISGSED-G------------TLKIWNSSTY 260 (304)
T ss_dssp CCSSCEE-EEEECSSSSEEEEEETT-S------------CEEEEETTTC
T ss_pred CCCCCEE-EEEECCCCCEEEEEcCC-C------------eEEEEECCCC
Confidence 1222222 23457899999999876 2 6889999886
No 30
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=97.69 E-value=0.0045 Score=60.78 Aligned_cols=204 Identities=15% Similarity=0.205 Sum_probs=110.2
Q ss_pred EEEEECCCCCEEeCccCCC-cccccceecCCCcEEEecCCCCCCCeEEEEeCCCCccceeecccccccccccceeEEccC
Q 039705 82 AVEYDAESAAIRPLKILTD-TWSSSGGLSANGTIVISGGWSSRGRSVRYLSGCYHACYWKEHHWELSAKRWFSTQHILPD 160 (539)
Q Consensus 82 ~~~yDp~t~~w~~l~~~~~-~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydP~~~t~~W~~~~~~m~~~R~y~s~~~L~d 160 (539)
..++|+++++..--..... ..+....+++||++|+.+ .+.+..|||. +...|+--.. ......++..++|
T Consensus 17 v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilvs~-----~~~V~~~d~~-G~~~W~~~~~---~~~~~~~~~~~~d 87 (276)
T 3no2_A 17 IAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILFSY-----SKGAKMITRD-GRELWNIAAP---AGCEMQTARILPD 87 (276)
T ss_dssp EEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEEEC-----BSEEEEECTT-SCEEEEEECC---TTCEEEEEEECTT
T ss_pred EEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEEeC-----CCCEEEECCC-CCEEEEEcCC---CCccccccEECCC
Confidence 5567877765321111111 234455678899999953 2569999995 4567864321 1112246678889
Q ss_pred CcEEEEcCccCCeEEEE-ecCCCcceee-cc-CccccCCCCCCCCcceEEEeeCCcEEEEEc--CceeEeeCCCCeEEEE
Q 039705 161 GSFIVVGGRREFSYEYI-LKEGKRIIYD-LP-ILNETTNPSENNLYPFVFLSTDGNLFIFAN--DRSILLNPETNEILHV 235 (539)
Q Consensus 161 G~VyvvGG~~~~~~E~y-P~~~~~~w~~-~~-~l~~~~~~~~~~~yp~~~~~~~G~Iyv~Gg--~~~e~yDp~tn~W~~~ 235 (539)
|++++....+...+-.+ + ++...|.. .. ..... ......+...++|++++... ..+.+||++ ++....
T Consensus 88 G~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~-----~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G~~~w~ 160 (276)
T 3no2_A 88 GNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERP-----HAQFRQINKNKKGNYLVPLFATSEVREIAPN-GQLLNS 160 (276)
T ss_dssp SCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSG-----GGSCSCCEECTTSCEEEEETTTTEEEEECTT-SCEEEE
T ss_pred CCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcc-----cccccCceECCCCCEEEEecCCCEEEEECCC-CCEEEE
Confidence 99998865422233334 3 22122321 11 10000 00111235667999888764 358899998 442212
Q ss_pred cccCCCCCCccCCCccEEecccccCCCCCCCcccEEEEecCCCCCcccccCCCcccccCCceEEEEeeCCCCceeee--c
Q 039705 236 FPILRGGSRNYPASATSALLPIKLQDPNSNAIRAEVLICGGAKPEAGVLAGKGEFMNALQDCGRIEITNKSATWQRE--M 313 (539)
Q Consensus 236 ~p~mp~~~r~yp~~g~av~lpl~~~~~~~~~~~g~Iyv~GG~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~--~ 313 (539)
... +. .| .+ +..++ ++.+++++..+ ..+..+|+.+..-.|+.. .
T Consensus 161 ~~~-~~----~~-~~-~~~~~-----------~g~~~v~~~~~----------------~~v~~~d~~tG~~~w~~~~~~ 206 (276)
T 3no2_A 161 VKL-SG----TP-FS-SAFLD-----------NGDCLVACGDA----------------HCFVQLNLESNRIVRRVNAND 206 (276)
T ss_dssp EEC-SS----CC-CE-EEECT-----------TSCEEEECBTT----------------SEEEEECTTTCCEEEEEEGGG
T ss_pred EEC-CC----Cc-cc-eeEcC-----------CCCEEEEeCCC----------------CeEEEEeCcCCcEEEEecCCC
Confidence 211 11 11 12 23332 78888886543 135677776445678874 3
Q ss_pred cCCCce--eceeEEecCCcEEEEc
Q 039705 314 MPSPRV--MGEMLLLPTGDVLIIN 335 (539)
Q Consensus 314 M~~~R~--~~~~vvlpdG~I~vvG 335 (539)
.+..|. ..++.+++||.|||..
T Consensus 207 ~~~~~l~~~~~~~~~~~G~i~v~~ 230 (276)
T 3no2_A 207 IEGVQLFFVAQLFPLQNGGLYICN 230 (276)
T ss_dssp SBSCCCSEEEEEEECTTSCEEEEE
T ss_pred CCCccccccccceEcCCCCEEEEe
Confidence 332231 2345678999999987
No 31
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=97.69 E-value=0.0038 Score=62.21 Aligned_cols=148 Identities=9% Similarity=0.003 Sum_probs=76.2
Q ss_pred eEEEEECCCCCEEeCccCCC-cccccceecCCCcEEEecCCCCCCCeEEEEeCCCCccceeeccccccc-ccccceeEEc
Q 039705 81 LAVEYDAESAAIRPLKILTD-TWSSSGGLSANGTIVISGGWSSRGRSVRYLSGCYHACYWKEHHWELSA-KRWFSTQHIL 158 (539)
Q Consensus 81 ~~~~yDp~t~~w~~l~~~~~-~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydP~~~t~~W~~~~~~m~~-~R~y~s~~~L 158 (539)
....+|+++++++.+..... ..-..-++.+||++|+++.. .....+.+||.. +.+++.+.. +.. ...-...+.-
T Consensus 19 ~v~~~d~~tg~~~~~~~~~~~~~p~~~a~spdg~l~~~~~~-~~~~~v~~~~~~--~g~~~~~~~-~~~~~~~p~~~a~s 94 (347)
T 3hfq_A 19 YQGTLDTTAKTLTNDGLLAATQNPTYLALSAKDCLYSVDKE-DDEGGIAAWQID--GQTAHKLNT-VVAPGTPPAYVAVD 94 (347)
T ss_dssp EEEEEETTTTEEEEEEEEEECSCCCCEEECTTCEEEEEEEE-TTEEEEEEEEEE--TTEEEEEEE-EEEESCCCSEEEEE
T ss_pred EEEEEcCCCCeEEEeeeeeccCCcceEEEccCCeEEEEEec-CCCceEEEEEec--CCcEEEeee-eecCCCCCEEEEEC
Confidence 45678888888876543211 11122345679997776532 123578899986 666655432 221 2222234556
Q ss_pred cCCcEEEEcCccCCeEEEE-ecCCCcceeeccCcccc-CCC--CCCCCcce-EEEeeCCcEEEEEc--CceeEeeCC-CC
Q 039705 159 PDGSFIVVGGRREFSYEYI-LKEGKRIIYDLPILNET-TNP--SENNLYPF-VFLSTDGNLFIFAN--DRSILLNPE-TN 230 (539)
Q Consensus 159 ~dG~VyvvGG~~~~~~E~y-P~~~~~~w~~~~~l~~~-~~~--~~~~~yp~-~~~~~~G~Iyv~Gg--~~~e~yDp~-tn 230 (539)
+||+.+++.+....++.+| ...+ ............ ... .....+++ +...+||++|+... ..+.+||.. ++
T Consensus 95 pdg~~l~~~~~~~~~v~v~~~~~~-g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g 173 (347)
T 3hfq_A 95 EARQLVYSANYHKGTAEVMKIAAD-GALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAG 173 (347)
T ss_dssp TTTTEEEEEETTTTEEEEEEECTT-SCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECTTS
T ss_pred CCCCEEEEEeCCCCEEEEEEeCCC-CCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECCCC
Confidence 7898555555444567777 4322 122111100000 000 00011233 34457999887764 357889987 45
Q ss_pred eEE
Q 039705 231 EIL 233 (539)
Q Consensus 231 ~W~ 233 (539)
+..
T Consensus 174 ~~~ 176 (347)
T 3hfq_A 174 QLS 176 (347)
T ss_dssp CEE
T ss_pred cEE
Confidence 543
No 32
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=97.69 E-value=0.012 Score=59.41 Aligned_cols=242 Identities=17% Similarity=0.192 Sum_probs=122.5
Q ss_pred EEEEECCCCCEEeCccCCCcccccceecCCCcEE-EecCCCCCCCeEEEEeCCCCccceeecccccccccccceeEEccC
Q 039705 82 AVEYDAESAAIRPLKILTDTWSSSGGLSANGTIV-ISGGWSSRGRSVRYLSGCYHACYWKEHHWELSAKRWFSTQHILPD 160 (539)
Q Consensus 82 ~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~l~-v~GG~~~g~~~v~~ydP~~~t~~W~~~~~~m~~~R~y~s~~~L~d 160 (539)
..+||..+++....-..+.. ....++.+||+.+ +.|+. ...+++||.. +.+.... +.....-.+.+.-+|
T Consensus 14 v~v~d~~~~~~~~~~~~~~~-~~~~~~s~dg~~l~~~~~~---d~~i~v~d~~--~~~~~~~---~~~~~~v~~~~~spd 84 (391)
T 1l0q_A 14 ISVIDVTSNKVTATIPVGSN-PMGAVISPDGTKVYVANAH---SNDVSIIDTA--TNNVIAT---VPAGSSPQGVAVSPD 84 (391)
T ss_dssp EEEEETTTTEEEEEEECSSS-EEEEEECTTSSEEEEEEGG---GTEEEEEETT--TTEEEEE---EECSSSEEEEEECTT
T ss_pred EEEEECCCCeEEEEeecCCC-cceEEECCCCCEEEEECCC---CCeEEEEECC--CCeEEEE---EECCCCccceEECCC
Confidence 55677776655432222211 1223456788754 56543 2579999987 5544322 332232234555668
Q ss_pred CcEEEEcCccCCeEEEE-ecCCCccee-eccCccccCCCCCCCCcce-EEEeeCCc-EEEEEc--CceeEeeCCCCeEEE
Q 039705 161 GSFIVVGGRREFSYEYI-LKEGKRIIY-DLPILNETTNPSENNLYPF-VFLSTDGN-LFIFAN--DRSILLNPETNEILH 234 (539)
Q Consensus 161 G~VyvvGG~~~~~~E~y-P~~~~~~w~-~~~~l~~~~~~~~~~~yp~-~~~~~~G~-Iyv~Gg--~~~e~yDp~tn~W~~ 234 (539)
|+.+++++.....+.+| ..++ +.. ... .. ..+. ....++|+ ||+.+. ..+.+||..+++...
T Consensus 85 g~~l~~~~~~~~~v~v~d~~~~--~~~~~~~---~~-------~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~ 152 (391)
T 1l0q_A 85 GKQVYVTNMASSTLSVIDTTSN--TVAGTVK---TG-------KSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVIN 152 (391)
T ss_dssp SSEEEEEETTTTEEEEEETTTT--EEEEEEE---CS-------SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEE
T ss_pred CCEEEEEECCCCEEEEEECCCC--eEEEEEe---CC-------CCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEE
Confidence 88666666555677788 5543 321 111 10 0122 23446787 556665 357889999887663
Q ss_pred EcccCCCCCCccCCCccEEecccccCCCCCCCcccEEEEecCCCCCcccccCCCcccccCCceEEEEeeCCCCceeeecc
Q 039705 235 VFPILRGGSRNYPASATSALLPIKLQDPNSNAIRAEVLICGGAKPEAGVLAGKGEFMNALQDCGRIEITNKSATWQREMM 314 (539)
Q Consensus 235 ~~p~mp~~~r~yp~~g~av~lpl~~~~~~~~~~~g~Iyv~GG~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~~M 314 (539)
.+ ..+ ..+ ....+.| .+..||+.++.+ ..+..+|+.. .+.... .
T Consensus 153 ~~---~~~--~~~--~~~~~~~----------dg~~l~~~~~~~----------------~~v~~~d~~~--~~~~~~-~ 196 (391)
T 1l0q_A 153 TV---SVG--RSP--KGIAVTP----------DGTKVYVANFDS----------------MSISVIDTVT--NSVIDT-V 196 (391)
T ss_dssp EE---ECC--SSE--EEEEECT----------TSSEEEEEETTT----------------TEEEEEETTT--TEEEEE-E
T ss_pred EE---ecC--CCc--ceEEECC----------CCCEEEEEeCCC----------------CEEEEEECCC--CeEEEE-E
Confidence 33 211 111 1122221 134676776543 1356677642 222221 1
Q ss_pred CCCceeceeEEecCCcEEEEcCcCCCCCCcccCCCCCCccEEEcCCCCCCCceE-ecCCCCCCccceeeEeeCCCCe-EE
Q 039705 315 PSPRVMGEMLLLPTGDVLIINGAKKGTAGWNFATDPNTTPVLYEPDDPINERFS-ELTPTSKPRMCHSTSVVLPDGK-IL 392 (539)
Q Consensus 315 ~~~R~~~~~vvlpdG~I~vvGG~~~g~~g~~~~~~~~~~~e~YdP~t~~g~~Wt-~~a~~~~~R~yhs~a~llpdG~-V~ 392 (539)
.....-.+....+||+.+++++.... -..+.+||.++. +-. .+... .. .....+.|||+ ||
T Consensus 197 ~~~~~~~~~~~~~~g~~l~~~~~~~~----------~~~v~~~d~~~~---~~~~~~~~~---~~-~~~~~~s~dg~~l~ 259 (391)
T 1l0q_A 197 KVEAAPSGIAVNPEGTKAYVTNVDKY----------FNTVSMIDTGTN---KITARIPVG---PD-PAGIAVTPDGKKVY 259 (391)
T ss_dssp ECSSEEEEEEECTTSSEEEEEEECSS----------CCEEEEEETTTT---EEEEEEECC---SS-EEEEEECTTSSEEE
T ss_pred ecCCCccceEECCCCCEEEEEecCcC----------CCcEEEEECCCC---eEEEEEecC---CC-ccEEEEccCCCEEE
Confidence 11112223355789987777764210 026889999876 432 22211 11 22345678996 55
Q ss_pred EecCC
Q 039705 393 VAGSN 397 (539)
Q Consensus 393 v~GG~ 397 (539)
++++.
T Consensus 260 ~s~~~ 264 (391)
T 1l0q_A 260 VALSF 264 (391)
T ss_dssp EEETT
T ss_pred EEcCC
Confidence 77654
No 33
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=97.67 E-value=0.011 Score=60.59 Aligned_cols=254 Identities=12% Similarity=0.072 Sum_probs=123.4
Q ss_pred EEEEECCCCCEEeCccC-----CCcccccceecCCCcEEEecCCCCCCCeEEEEeCCCCccceeeccccccc-cccccee
Q 039705 82 AVEYDAESAAIRPLKIL-----TDTWSSSGGLSANGTIVISGGWSSRGRSVRYLSGCYHACYWKEHHWELSA-KRWFSTQ 155 (539)
Q Consensus 82 ~~~yDp~t~~w~~l~~~-----~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydP~~~t~~W~~~~~~m~~-~R~y~s~ 155 (539)
..+||+.+++....... +.......+...+|+++++++.. ..+.+||.. +.+.... +.. ...-.+.
T Consensus 146 i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d---~~v~~~d~~--~~~~~~~---~~~~~~~~~~~ 217 (433)
T 3bws_A 146 MDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQA---NAVHVFDLK--TLAYKAT---VDLTGKWSKIL 217 (433)
T ss_dssp EEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGG---TEEEEEETT--TCCEEEE---EECSSSSEEEE
T ss_pred EEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECCC---CEEEEEECC--CceEEEE---EcCCCCCeeEE
Confidence 67899998877653221 11111223345689999988742 678999987 4332211 211 1122234
Q ss_pred EEccCCcEEEEcCccCCeEEEE-ecCCCccee-eccCccccCCCCCCCCcceE-EEeeCCcEEEEEcC----------ce
Q 039705 156 HILPDGSFIVVGGRREFSYEYI-LKEGKRIIY-DLPILNETTNPSENNLYPFV-FLSTDGNLFIFAND----------RS 222 (539)
Q Consensus 156 ~~L~dG~VyvvGG~~~~~~E~y-P~~~~~~w~-~~~~l~~~~~~~~~~~yp~~-~~~~~G~Iyv~Gg~----------~~ 222 (539)
+.-+||+.+++.+.....+.+| ..+. +.. ..+.. ..+.. ...++|+.+++++. .+
T Consensus 218 ~~~~~~~~l~~~~~~~~~i~~~d~~~~--~~~~~~~~~----------~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i 285 (433)
T 3bws_A 218 LYDPIRDLVYCSNWISEDISVIDRKTK--LEIRKTDKI----------GLPRGLLLSKDGKELYIAQFSASNQESGGGRL 285 (433)
T ss_dssp EEETTTTEEEEEETTTTEEEEEETTTT--EEEEECCCC----------SEEEEEEECTTSSEEEEEEEESCTTCSCCEEE
T ss_pred EEcCCCCEEEEEecCCCcEEEEECCCC--cEEEEecCC----------CCceEEEEcCCCCEEEEEECCCCccccCCCeE
Confidence 4455776554444444567777 5443 321 11110 01222 33468876666542 45
Q ss_pred eEeeCCCCeEEEEcccCCCCCCccCCCccEEecccccCCCCCCCcccEEEEecCCCCCcccccCCCcccccCCceEEEEe
Q 039705 223 ILLNPETNEILHVFPILRGGSRNYPASATSALLPIKLQDPNSNAIRAEVLICGGAKPEAGVLAGKGEFMNALQDCGRIEI 302 (539)
Q Consensus 223 e~yDp~tn~W~~~~p~mp~~~r~yp~~g~av~lpl~~~~~~~~~~~g~Iyv~GG~~~~~~~~~~~~~~~~a~~s~~~~d~ 302 (539)
.+||..+++....+ ..+. .+ ...+.-| .+..+|+.++.+ ..+..||+
T Consensus 286 ~~~d~~~~~~~~~~-~~~~----~~--~~~~~~~----------~g~~l~~~~~~~----------------~~v~v~d~ 332 (433)
T 3bws_A 286 GIYSMDKEKLIDTI-GPPG----NK--RHIVSGN----------TENKIYVSDMCC----------------SKIEVYDL 332 (433)
T ss_dssp EEEETTTTEEEEEE-EEEE----CE--EEEEECS----------STTEEEEEETTT----------------TEEEEEET
T ss_pred EEEECCCCcEEeec-cCCC----Cc--ceEEECC----------CCCEEEEEecCC----------------CEEEEEEC
Confidence 68999988765322 1111 10 1122211 133688886644 13566776
Q ss_pred eCCCCceeeeccCCCceeceeEEecCCcEEEEcCcCCCCC--CcccCCCCCCccEEEcCCCCCCCceEecCCCCCCccce
Q 039705 303 TNKSATWQREMMPSPRVMGEMLLLPTGDVLIINGAKKGTA--GWNFATDPNTTPVLYEPDDPINERFSELTPTSKPRMCH 380 (539)
Q Consensus 303 ~~~~~~W~~~~M~~~R~~~~~vvlpdG~I~vvGG~~~g~~--g~~~~~~~~~~~e~YdP~t~~g~~Wt~~a~~~~~R~yh 380 (539)
.. .+-.. .++....-.....-|||+.+++++...+.. .+-.....--.+.+||.++. +....-.. ...-
T Consensus 333 ~~--~~~~~-~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~---~~~~~~~~--~~~~- 403 (433)
T 3bws_A 333 KE--KKVQK-SIPVFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTD---TVKEFWEA--GNQP- 403 (433)
T ss_dssp TT--TEEEE-EEECSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTT---EEEEEEEC--SSSE-
T ss_pred CC--CcEEE-EecCCCCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCC---cEEEEecC--CCCC-
Confidence 42 22111 222221122445678998666665431100 00000000016889999887 54332111 1111
Q ss_pred eeEeeCCCCeEEEecCC
Q 039705 381 STSVVLPDGKILVAGSN 397 (539)
Q Consensus 381 s~a~llpdG~V~v~GG~ 397 (539)
....+.|||+.+++++.
T Consensus 404 ~~~~~s~dg~~l~~~~~ 420 (433)
T 3bws_A 404 TGLDVSPDNRYLVISDF 420 (433)
T ss_dssp EEEEECTTSCEEEEEET
T ss_pred ceEEEcCCCCEEEEEEC
Confidence 23445799988776653
No 34
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=97.65 E-value=0.0081 Score=61.44 Aligned_cols=249 Identities=11% Similarity=0.070 Sum_probs=131.0
Q ss_pred eEEEEECCCCCEEeCccC-CCcccccceecCCCcEEEecCCCCCCCeEEEEeCCCCccceeecccccccccccceeEEcc
Q 039705 81 LAVEYDAESAAIRPLKIL-TDTWSSSGGLSANGTIVISGGWSSRGRSVRYLSGCYHACYWKEHHWELSAKRWFSTQHILP 159 (539)
Q Consensus 81 ~~~~yDp~t~~w~~l~~~-~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydP~~~t~~W~~~~~~m~~~R~y~s~~~L~ 159 (539)
...+||..+++...+... +.......+..++|+++++|+.. ..+.+||.. +.+... . +............
T Consensus 114 ~v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~d---g~i~iwd~~--~~~~~~--~-~~~~~~~v~~~~~- 184 (401)
T 4aez_A 114 NVYVWNADSGSVSALAETDESTYVASVKWSHDGSFLSVGLGN---GLVDIYDVE--SQTKLR--T-MAGHQARVGCLSW- 184 (401)
T ss_dssp EEEEEETTTCCEEEEEECCTTCCEEEEEECTTSSEEEEEETT---SCEEEEETT--TCCEEE--E-ECCCSSCEEEEEE-
T ss_pred eEEEeeCCCCcEeEeeecCCCCCEEEEEECCCCCEEEEECCC---CeEEEEECc--CCeEEE--E-ecCCCCceEEEEE-
Confidence 467899988887655433 22222233456799999998753 478999987 443322 1 3222222233344
Q ss_pred CCcEEEEcCccCCeEEEE-ecCCCcceeeccCccccCCCCCCCCcceEEEeeCCcEEEEEcC--ceeEeeCCCCeEEEEc
Q 039705 160 DGSFIVVGGRREFSYEYI-LKEGKRIIYDLPILNETTNPSENNLYPFVFLSTDGNLFIFAND--RSILLNPETNEILHVF 236 (539)
Q Consensus 160 dG~VyvvGG~~~~~~E~y-P~~~~~~w~~~~~l~~~~~~~~~~~yp~~~~~~~G~Iyv~Gg~--~~e~yDp~tn~W~~~~ 236 (539)
++++++.|+.++ .+.+| .... .-.... +..... . --.....++|++++.|+. .+.+||..+.+-...+
T Consensus 185 ~~~~l~~~~~dg-~i~i~d~~~~--~~~~~~-~~~~~~----~-v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~ 255 (401)
T 4aez_A 185 NRHVLSSGSRSG-AIHHHDVRIA--NHQIGT-LQGHSS----E-VCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKFTK 255 (401)
T ss_dssp ETTEEEEEETTS-EEEEEETTSS--SCEEEE-EECCSS----C-EEEEEECTTSSEEEEEETTSCEEEEETTCSSEEEEE
T ss_pred CCCEEEEEcCCC-CEEEEecccC--cceeeE-EcCCCC----C-eeEEEEcCCCCEEEEEeCCCeEEEccCCCCCccEEe
Confidence 788888888763 55666 3322 111111 111100 0 001233468999999875 4788999886644323
Q ss_pred ccCCCCCCccCCCccEEecccccCCCCCCCcccEEEEecCCCCCcccccCCCcccccCCceEEEEeeCCCCceeeeccCC
Q 039705 237 PILRGGSRNYPASATSALLPIKLQDPNSNAIRAEVLICGGAKPEAGVLAGKGEFMNALQDCGRIEITNKSATWQREMMPS 316 (539)
Q Consensus 237 p~mp~~~r~yp~~g~av~lpl~~~~~~~~~~~g~Iyv~GG~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~~M~~ 316 (539)
..... . --.....| .+..++++||... ...+..+|+.. .+-.. .+..
T Consensus 256 ~~~~~---~---v~~~~~~p----------~~~~ll~~~~gs~--------------d~~i~i~d~~~--~~~~~-~~~~ 302 (401)
T 4aez_A 256 TNHNA---A---VKAVAWCP----------WQSNLLATGGGTM--------------DKQIHFWNAAT--GARVN-TVDA 302 (401)
T ss_dssp CCCSS---C---CCEEEECT----------TSTTEEEEECCTT--------------TCEEEEEETTT--CCEEE-EEEC
T ss_pred cCCcc---e---EEEEEECC----------CCCCEEEEecCCC--------------CCEEEEEECCC--CCEEE-EEeC
Confidence 21111 0 01222222 1456777775211 12355677642 22111 1211
Q ss_pred CceeceeEEecCCcEEEE--cCcCCCCCCcccCCCCCCccEEEcCCCCCCCceEecCCC--CCCccceeeEeeCCCCeEE
Q 039705 317 PRVMGEMLLLPTGDVLII--NGAKKGTAGWNFATDPNTTPVLYEPDDPINERFSELTPT--SKPRMCHSTSVVLPDGKIL 392 (539)
Q Consensus 317 ~R~~~~~vvlpdG~I~vv--GG~~~g~~g~~~~~~~~~~~e~YdP~t~~g~~Wt~~a~~--~~~R~yhs~a~llpdG~V~ 392 (539)
...-.+....++|+.+++ |..+ | .+.+||..+. +......+ ...+. ....+.|||+.+
T Consensus 303 ~~~v~~~~~s~~~~~l~~~~g~~d-g------------~i~v~~~~~~---~~~~~~~~~~h~~~v--~~~~~s~dg~~l 364 (401)
T 4aez_A 303 GSQVTSLIWSPHSKEIMSTHGFPD-N------------NLSIWSYSSS---GLTKQVDIPAHDTRV--LYSALSPDGRIL 364 (401)
T ss_dssp SSCEEEEEECSSSSEEEEEECTTT-C------------EEEEEEEETT---EEEEEEEEECCSSCC--CEEEECTTSSEE
T ss_pred CCcEEEEEECCCCCeEEEEeecCC-C------------cEEEEecCCc---cceeEEEecCCCCCE--EEEEECCCCCEE
Confidence 111223345689998887 4333 1 5789998887 56543222 11222 224567999999
Q ss_pred EecCCC
Q 039705 393 VAGSNP 398 (539)
Q Consensus 393 v~GG~~ 398 (539)
++|+.+
T Consensus 365 ~s~~~d 370 (401)
T 4aez_A 365 STAASD 370 (401)
T ss_dssp EEECTT
T ss_pred EEEeCC
Confidence 999864
No 35
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=97.63 E-value=0.049 Score=54.93 Aligned_cols=245 Identities=12% Similarity=0.139 Sum_probs=118.6
Q ss_pred EEEEECCCCC--EEeCccCCCcccccceecCCCcEEEecCCCCCCCeEEEEeCCCCccceeecccc-cccccccceeEEc
Q 039705 82 AVEYDAESAA--IRPLKILTDTWSSSGGLSANGTIVISGGWSSRGRSVRYLSGCYHACYWKEHHWE-LSAKRWFSTQHIL 158 (539)
Q Consensus 82 ~~~yDp~t~~--w~~l~~~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydP~~~t~~W~~~~~~-m~~~R~y~s~~~L 158 (539)
...+|+++++ |+.-.. .... ...++.+|+|++... ...+..||+.++...|+..... ....+...+. ++
T Consensus 115 l~a~d~~tG~~~W~~~~~-~~~~--~~p~~~~~~v~v~~~----~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~-~~ 186 (376)
T 3q7m_A 115 VYALNTSDGTVAWQTKVA-GEAL--SRPVVSDGLVLIHTS----NGQLQALNEADGAVKWTVNLDMPSLSLRGESAP-TT 186 (376)
T ss_dssp EEEEETTTCCEEEEEECS-SCCC--SCCEEETTEEEEECT----TSEEEEEETTTCCEEEEEECCC-----CCCCCC-EE
T ss_pred EEEEECCCCCEEEEEeCC-CceE--cCCEEECCEEEEEcC----CCeEEEEECCCCcEEEEEeCCCCceeecCCCCc-EE
Confidence 5678888775 443211 1111 122345777776543 2478899997445568754320 1111222233 33
Q ss_pred cCCcEEEEcCccCCeEEEE-ecCCCcceee-ccCccccCCCCCCCCcceEEEeeCCcEEEEEc-CceeEeeCCCCe--EE
Q 039705 159 PDGSFIVVGGRREFSYEYI-LKEGKRIIYD-LPILNETTNPSENNLYPFVFLSTDGNLFIFAN-DRSILLNPETNE--IL 233 (539)
Q Consensus 159 ~dG~VyvvGG~~~~~~E~y-P~~~~~~w~~-~~~l~~~~~~~~~~~yp~~~~~~~G~Iyv~Gg-~~~e~yDp~tn~--W~ 233 (539)
.+|.||+ |..+ ..+-.+ +.++...|.. ....................++.+|.||+.+. ....++|+++++ |.
T Consensus 187 ~~~~v~~-g~~~-g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l~~~d~~tG~~~w~ 264 (376)
T 3q7m_A 187 AFGAAVV-GGDN-GRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQIMWK 264 (376)
T ss_dssp ETTEEEE-CCTT-TEEEEEETTTCCEEEEEECCC-----------CCCCCCEEETTEEEEECTTSCEEEEETTTCCEEEE
T ss_pred ECCEEEE-EcCC-CEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEecCcEEEEEECCCCcEEee
Confidence 3677666 4332 334455 5554445642 11100000000000000112445788888763 457889998775 54
Q ss_pred EEcccCCCCCCccCCCccEEecccccCCCCCCCcccEEEEecCCCCCcccccCCCcccccCCceEEEEeeCCCCceeeec
Q 039705 234 HVFPILRGGSRNYPASATSALLPIKLQDPNSNAIRAEVLICGGAKPEAGVLAGKGEFMNALQDCGRIEITNKSATWQREM 313 (539)
Q Consensus 234 ~~~p~mp~~~r~yp~~g~av~lpl~~~~~~~~~~~g~Iyv~GG~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~~ 313 (539)
.. ... + ..... .+++||+.... ..+.++|+.+....|+...
T Consensus 265 ~~---~~~----~----~~~~~-----------~~~~l~~~~~~-----------------g~l~~~d~~tG~~~w~~~~ 305 (376)
T 3q7m_A 265 RE---LGS----V----NDFIV-----------DGNRIYLVDQN-----------------DRVMALTIDGGVTLWTQSD 305 (376)
T ss_dssp EC---CCC----E----EEEEE-----------ETTEEEEEETT-----------------CCEEEEETTTCCEEEEECT
T ss_pred cc---CCC----C----CCceE-----------ECCEEEEEcCC-----------------CeEEEEECCCCcEEEeecc
Confidence 21 111 1 11111 26788887532 1356788765455687653
Q ss_pred cCCCceeceeEEecCCcEEEEcCcCCCCCCcccCCCCCCccEEEcCCCCCCCceEecCCCCCCccceeeEeeCCCCeEEE
Q 039705 314 MPSPRVMGEMLLLPTGDVLIINGAKKGTAGWNFATDPNTTPVLYEPDDPINERFSELTPTSKPRMCHSTSVVLPDGKILV 393 (539)
Q Consensus 314 M~~~R~~~~~vvlpdG~I~vvGG~~~g~~g~~~~~~~~~~~e~YdP~t~~g~~Wt~~a~~~~~R~yhs~a~llpdG~V~v 393 (539)
+.... ... .++.+++||+... + | .+.+||+++.. ..|+.-.. ......+.++ .+|+||+
T Consensus 306 ~~~~~-~~~-~~~~~~~l~v~~~-~-g------------~l~~~d~~tG~-~~~~~~~~--~~~~~~~~~~--~~~~l~v 364 (376)
T 3q7m_A 306 LLHRL-LTS-PVLYNGNLVVGDS-E-G------------YLHWINVEDGR-FVAQQKVD--SSGFQTEPVA--ADGKLLI 364 (376)
T ss_dssp TTTSC-CCC-CEEETTEEEEECT-T-S------------EEEEEETTTCC-EEEEEECC--TTCBCSCCEE--ETTEEEE
T ss_pred cCCCc-ccC-CEEECCEEEEEeC-C-C------------eEEEEECCCCc-EEEEEecC--CCcceeCCEE--ECCEEEE
Confidence 33322 223 3344888887432 2 1 47889999872 13654221 1122222333 3899988
Q ss_pred ecC
Q 039705 394 AGS 396 (539)
Q Consensus 394 ~GG 396 (539)
...
T Consensus 365 ~~~ 367 (376)
T 3q7m_A 365 QAK 367 (376)
T ss_dssp EBT
T ss_pred EeC
Confidence 654
No 36
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=97.61 E-value=0.019 Score=57.95 Aligned_cols=250 Identities=13% Similarity=0.156 Sum_probs=128.7
Q ss_pred eEEEEECCCCCEEeCccCCCcccccceecCCCcEEEecCCCCCCCeEEEEeCCCCccc---eeeccccccccccc-ceeE
Q 039705 81 LAVEYDAESAAIRPLKILTDTWSSSGGLSANGTIVISGGWSSRGRSVRYLSGCYHACY---WKEHHWELSAKRWF-STQH 156 (539)
Q Consensus 81 ~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydP~~~t~~---W~~~~~~m~~~R~y-~s~~ 156 (539)
...+||..+.+.......+..+-...+..++|..+++||.. ..+.+|+.. ... .......+.....+ .++.
T Consensus 87 ~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d---~~i~v~~~~--~~~~~~~~~~~~~~~~h~~~v~~~~ 161 (354)
T 2pbi_B 87 KVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLD---NKCSVYPLT--FDKNENMAAKKKSVAMHTNYLSACS 161 (354)
T ss_dssp EEEEEETTTCCEEEEEECSSSCCCEEEECTTSSEEEEESTT---SEEEEEECC--CCTTCCSGGGCEEEEECSSCEEEEE
T ss_pred eEEEEECCCCCcceEEecCCCCEEEEEECCCCCEEEEeeCC---CCEEEEEEe--ccccccccccceeeeccCCcEEEEE
Confidence 46789987776544333333333334567899999999974 578888764 211 00000011111111 2334
Q ss_pred EccCCcEEEEcCccCCeEEEE-ecCCCcceeeccCccccCCCCCCCCcceEEEee--CCcEEEEEcC--ceeEeeCCCCe
Q 039705 157 ILPDGSFIVVGGRREFSYEYI-LKEGKRIIYDLPILNETTNPSENNLYPFVFLST--DGNLFIFAND--RSILLNPETNE 231 (539)
Q Consensus 157 ~L~dG~VyvvGG~~~~~~E~y-P~~~~~~w~~~~~l~~~~~~~~~~~yp~~~~~~--~G~Iyv~Gg~--~~e~yDp~tn~ 231 (539)
..++++.++.|+.+ .++.+| ..+. +... .+..... ... .....+ +|++++.|+. .+.+||.++.+
T Consensus 162 ~~~~~~~l~t~s~D-~~v~lwd~~~~--~~~~--~~~~h~~----~v~-~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~ 231 (354)
T 2pbi_B 162 FTNSDMQILTASGD-GTCALWDVESG--QLLQ--SFHGHGA----DVL-CLDLAPSETGNTFVSGGCDKKAMVWDMRSGQ 231 (354)
T ss_dssp ECSSSSEEEEEETT-SEEEEEETTTC--CEEE--EEECCSS----CEE-EEEECCCSSCCEEEEEETTSCEEEEETTTCC
T ss_pred EeCCCCEEEEEeCC-CcEEEEeCCCC--eEEE--EEcCCCC----CeE-EEEEEeCCCCCEEEEEeCCCeEEEEECCCCc
Confidence 45577777777655 466777 4433 2210 0111100 000 112223 5788888875 47889999887
Q ss_pred EEEEcccCCCCCCccCCCccEEecccccCCCCCCCcccEEEEecCCCCCcccccCCCcccccCCceEEEEeeCCCCceee
Q 039705 232 ILHVFPILRGGSRNYPASATSALLPIKLQDPNSNAIRAEVLICGGAKPEAGVLAGKGEFMNALQDCGRIEITNKSATWQR 311 (539)
Q Consensus 232 W~~~~p~mp~~~r~yp~~g~av~lpl~~~~~~~~~~~g~Iyv~GG~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~ 311 (539)
..+.+ .. .... ..+....| +++.+++|+.+. ++..+|+.. .+-..
T Consensus 232 ~~~~~---~~-h~~~--v~~v~~~p-----------~~~~l~s~s~D~----------------~v~lwd~~~--~~~~~ 276 (354)
T 2pbi_B 232 CVQAF---ET-HESD--VNSVRYYP-----------SGDAFASGSDDA----------------TCRLYDLRA--DREVA 276 (354)
T ss_dssp EEEEE---CC-CSSC--EEEEEECT-----------TSSEEEEEETTS----------------CEEEEETTT--TEEEE
T ss_pred EEEEe---cC-CCCC--eEEEEEeC-----------CCCEEEEEeCCC----------------eEEEEECCC--CcEEE
Confidence 65333 21 1110 01122222 567788888651 355677642 11111
Q ss_pred e-ccCCCc-eeceeEEecCCcEEEEcCcCCCCCCcccCCCCCCccEEEcCCCCCCCceEecCCCCCCccceeeEeeCCCC
Q 039705 312 E-MMPSPR-VMGEMLLLPTGDVLIINGAKKGTAGWNFATDPNTTPVLYEPDDPINERFSELTPTSKPRMCHSTSVVLPDG 389 (539)
Q Consensus 312 ~-~M~~~R-~~~~~vvlpdG~I~vvGG~~~g~~g~~~~~~~~~~~e~YdP~t~~g~~Wt~~a~~~~~R~yhs~a~llpdG 389 (539)
. .-.... .......-|+|+++++|+.+ + ++.+||..+. +.-..+.. ...+ -....+.|||
T Consensus 277 ~~~~~~~~~~~~~~~~s~~g~~l~~g~~d-~------------~i~vwd~~~~--~~~~~l~~-h~~~--v~~l~~spdg 338 (354)
T 2pbi_B 277 IYSKESIIFGASSVDFSLSGRLLFAGYND-Y------------TINVWDVLKG--SRVSILFG-HENR--VSTLRVSPDG 338 (354)
T ss_dssp EECCTTCCSCEEEEEECTTSSEEEEEETT-S------------CEEEEETTTC--SEEEEECC-CSSC--EEEEEECTTS
T ss_pred EEcCCCcccceeEEEEeCCCCEEEEEECC-C------------cEEEEECCCC--ceEEEEEC-CCCc--EEEEEECCCC
Confidence 1 111101 11122345899999998865 2 6889998765 12333321 1111 2234567999
Q ss_pred eEEEecCCC
Q 039705 390 KILVAGSNP 398 (539)
Q Consensus 390 ~V~v~GG~~ 398 (539)
+.+++|+.+
T Consensus 339 ~~l~sgs~D 347 (354)
T 2pbi_B 339 TAFCSGSWD 347 (354)
T ss_dssp SCEEEEETT
T ss_pred CEEEEEcCC
Confidence 999999864
No 37
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=97.57 E-value=0.06 Score=51.57 Aligned_cols=261 Identities=14% Similarity=0.088 Sum_probs=132.3
Q ss_pred ceEEEecCCCCEEEEEccccCCCCCccCCCcccccCCCccccccccceeEEEEECCCCCEEeCccCCC-cccccceecCC
Q 039705 33 AMHIILFPNTNKAIMLDAVSLGPSNVRLPVGIYRLNPGAWQKYVDYRALAVEYDAESAAIRPLKILTD-TWSSSGGLSAN 111 (539)
Q Consensus 33 ~~~~~ll~~~gkv~~~g~~~~~~~~~~~~~g~~~~~~~~~~g~~~~~~~~~~yDp~t~~w~~l~~~~~-~~c~~~~~l~d 111 (539)
+..+++- ++|++|+.+... + ...+||+. ++++.+..... ....+-+...+
T Consensus 22 p~~i~~d-~~g~l~v~~~~~----------~-----------------~v~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~ 72 (300)
T 2qc5_A 22 PYGITSS-EDGKVWFTQHKA----------N-----------------KISSLDQS-GRIKEFEVPTPDAKVMCLIVSSL 72 (300)
T ss_dssp EEEEEEC-TTSCEEEEETTT----------T-----------------EEEEECTT-SCEEEEECSSTTCCEEEEEECTT
T ss_pred cceeeEC-CCCCEEEEcCCC----------C-----------------eEEEECCC-CceEEEECCCCCCcceeEEECCC
Confidence 3445554 889999876421 1 24567777 66665432211 12222334468
Q ss_pred CcEEEecCCCCCCCeEEEEeCCCCccceeeccccccc-ccccceeEEccCCcEEEEcCccCCeEEEE-ecCCCcceeecc
Q 039705 112 GTIVISGGWSSRGRSVRYLSGCYHACYWKEHHWELSA-KRWFSTQHILPDGSFIVVGGRREFSYEYI-LKEGKRIIYDLP 189 (539)
Q Consensus 112 G~l~v~GG~~~g~~~v~~ydP~~~t~~W~~~~~~m~~-~R~y~s~~~L~dG~VyvvGG~~~~~~E~y-P~~~~~~w~~~~ 189 (539)
|++++.... ...+..||+. .++.... ++. ...-.+.+.-.+|++|+..... ..+..| +. + +.....
T Consensus 73 g~l~v~~~~---~~~v~~~d~~---g~~~~~~--~~~~~~~~~~i~~~~~g~l~v~~~~~-~~i~~~~~~-g--~~~~~~ 140 (300)
T 2qc5_A 73 GDIWFTENG---ANKIGKLSKK---GGFTEYP--LPQPDSGPYGITEGLNGDIWFTQLNG-DRIGKLTAD-G--TIYEYD 140 (300)
T ss_dssp SCEEEEETT---TTEEEEECTT---SCEEEEE--CSSTTCCEEEEEECSTTCEEEEETTT-TEEEEECTT-S--CEEEEE
T ss_pred CCEEEEecC---CCeEEEECCC---CCeEEec--CCCCCCCCccceECCCCCEEEEccCC-CeEEEECCC-C--CEEEcc
Confidence 999987542 3568899986 3343321 211 1212234444589999875432 345555 44 3 332111
Q ss_pred CccccCCCCCCCCcceEEEe-eCCcEEEEE--cCceeEeeCCCCeEEEEcccCCCCCCccCCCccEEecccccCCCCCCC
Q 039705 190 ILNETTNPSENNLYPFVFLS-TDGNLFIFA--NDRSILLNPETNEILHVFPILRGGSRNYPASATSALLPIKLQDPNSNA 266 (539)
Q Consensus 190 ~l~~~~~~~~~~~yp~~~~~-~~G~Iyv~G--g~~~e~yDp~tn~W~~~~p~mp~~~r~yp~~g~av~lpl~~~~~~~~~ 266 (539)
. ... ...|...+. ++|+||+.. +..+.+||+ +++.. .+. ++. ...+| ..+.+ .
T Consensus 141 ~-~~~------~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~-~~~-~~~-~~~~~---~~i~~--d-------- 196 (300)
T 2qc5_A 141 L-PNK------GSYPAFITLGSDNALWFTENQNNSIGRITN-TGKLE-EYP-LPT-NAAAP---VGITS--G-------- 196 (300)
T ss_dssp C-SST------TCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEE-EEE-CSS-TTCCE---EEEEE--C--------
T ss_pred C-CCC------CCCceeEEECCCCCEEEEecCCCeEEEECC-CCcEE-Eee-CCC-CCCCc---ceEEE--C--------
Confidence 1 110 123444444 689999887 346788999 56655 331 222 11121 12211 1
Q ss_pred cccEEEEecCCCCCcccccCCCcccccCCceEEEEeeCCCCceeeeccC--CCceeceeEEecCCcEEEEcCcCCCCCCc
Q 039705 267 IRAEVLICGGAKPEAGVLAGKGEFMNALQDCGRIEITNKSATWQREMMP--SPRVMGEMLLLPTGDVLIINGAKKGTAGW 344 (539)
Q Consensus 267 ~~g~Iyv~GG~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~~M~--~~R~~~~~vvlpdG~I~vvGG~~~g~~g~ 344 (539)
.+++||++.... ..+.+||+ +.++....++ ..+. .+.+.-++|+|||..-..
T Consensus 197 ~~g~l~v~~~~~----------------~~i~~~~~---~g~~~~~~~~~~~~~~-~~i~~d~~g~l~v~~~~~------ 250 (300)
T 2qc5_A 197 NDGALWFVEIMG----------------NKIGRITT---TGEISEYDIPTPNARP-HAITAGKNSEIWFTEWGA------ 250 (300)
T ss_dssp TTSSEEEEETTT----------------TEEEEECT---TCCEEEEECSSTTCCE-EEEEECSTTCEEEEETTT------
T ss_pred CCCCEEEEccCC----------------CEEEEEcC---CCcEEEEECCCCCCCc-eEEEECCCCCEEEeccCC------
Confidence 167888875321 13556665 2333332222 1111 233445789999976322
Q ss_pred ccCCCCCCccEEEcCCCCCCCceEecCCCCCCccceeeEeeCCCCeEEEecC
Q 039705 345 NFATDPNTTPVLYEPDDPINERFSELTPTSKPRMCHSTSVVLPDGKILVAGS 396 (539)
Q Consensus 345 ~~~~~~~~~~e~YdP~t~~g~~Wt~~a~~~~~R~yhs~a~llpdG~V~v~GG 396 (539)
..+.+||+ +. +++...-......-++. ++.+||++|++..
T Consensus 251 -------~~i~~~~~-~g---~~~~~~~~~~~~~~~~i-~~~~~g~l~v~~~ 290 (300)
T 2qc5_A 251 -------NQIGRITN-DN---TIQEYQLQTENAEPHGI-TFGKDGSVWFALK 290 (300)
T ss_dssp -------TEEEEECT-TS---CEEEEECCSTTCCCCCE-EECTTSCEEEECS
T ss_pred -------CeEEEECC-CC---cEEEEECCccCCcccee-EeCCCCCEEEEcc
Confidence 14678998 44 55543211011112333 4568999999764
No 38
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=97.57 E-value=0.0035 Score=62.57 Aligned_cols=261 Identities=12% Similarity=0.102 Sum_probs=125.1
Q ss_pred EEEEECCCCCEEeCcc---C-CCcccccceecCCCcEEEecCCCCCCCeEEEEeCCCC---ccceeeccccccc-ccccc
Q 039705 82 AVEYDAESAAIRPLKI---L-TDTWSSSGGLSANGTIVISGGWSSRGRSVRYLSGCYH---ACYWKEHHWELSA-KRWFS 153 (539)
Q Consensus 82 ~~~yDp~t~~w~~l~~---~-~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydP~~~---t~~W~~~~~~m~~-~R~y~ 153 (539)
..+||..++.++.+.. . +.......+..++|+++++|+.+ ..+++||.... ..++..... +.. ...-.
T Consensus 36 i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D---~~v~iw~~~~~~~~~~~~~~~~~-~~~h~~~V~ 111 (330)
T 2hes_X 36 IKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFD---STVSIWAKEESADRTFEMDLLAI-IEGHENEVK 111 (330)
T ss_dssp EEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEETT---SCEEEEEC-------CCCEEEEE-EC----CEE
T ss_pred EEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeCC---CcEEEEEcccCcCccccceeEEE-EcCCCCcEE
Confidence 5567777654433221 1 22222223456789999999863 57889987410 012222221 221 11122
Q ss_pred eeEEccCCcEEEEcCccCCeEEEE-ecCCCcceeeccCccccCCCCCCCCcceEEEeeCCcEEEEEcC--ceeEeeCCCC
Q 039705 154 TQHILPDGSFIVVGGRREFSYEYI-LKEGKRIIYDLPILNETTNPSENNLYPFVFLSTDGNLFIFAND--RSILLNPETN 230 (539)
Q Consensus 154 s~~~L~dG~VyvvGG~~~~~~E~y-P~~~~~~w~~~~~l~~~~~~~~~~~yp~~~~~~~G~Iyv~Gg~--~~e~yDp~tn 230 (539)
+++.-+||+.++.|+.+. ++.+| .......+.....+..... . --.+...++|++++.|+. .+.+||..++
T Consensus 112 ~v~~sp~g~~las~s~D~-~v~iwd~~~~~~~~~~~~~~~~h~~----~-v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~ 185 (330)
T 2hes_X 112 GVAWSNDGYYLATCSRDK-SVWIWETDESGEEYECISVLQEHSQ----D-VKHVIWHPSEALLASSSYDDTVRIWKDYDD 185 (330)
T ss_dssp EEEECTTSCEEEEEETTS-CEEEEECCTTCCCCEEEEEECCCSS----C-EEEEEECSSSSEEEEEETTSCEEEEEEETT
T ss_pred EEEECCCCCEEEEEeCCC-EEEEEeccCCCCCeEEEEEeccCCC----c-eEEEEECCCCCEEEEEcCCCeEEEEECCCC
Confidence 344456899888888763 56677 4221112222111211111 0 001223468999998875 4778998887
Q ss_pred eEEEEcccCCCCCCccCCCccEEecccccCCCCCCCcccEEEEecCCCCCcccccCCCcccccCCceEEEEeeCC----C
Q 039705 231 EILHVFPILRGGSRNYPASATSALLPIKLQDPNSNAIRAEVLICGGAKPEAGVLAGKGEFMNALQDCGRIEITNK----S 306 (539)
Q Consensus 231 ~W~~~~p~mp~~~r~yp~~g~av~lpl~~~~~~~~~~~g~Iyv~GG~~~~~~~~~~~~~~~~a~~s~~~~d~~~~----~ 306 (539)
.|. .+..+.+. . +...-+...| + .++..++.|+.+. ++..+|+... .
T Consensus 186 ~~~-~~~~~~~h-~-----~~v~~~~~~~----~--~~~~~l~s~s~D~----------------~v~iw~~~~~~~~~~ 236 (330)
T 2hes_X 186 DWE-CVAVLNGH-E-----GTVWSSDFDK----T--EGVFRLCSGSDDS----------------TVRVWKYMGDDEDDQ 236 (330)
T ss_dssp EEE-EEEEECCC-S-----SCEEEEEECC----S--SSSCEEEEEETTS----------------CEEEEEEEEECTTSC
T ss_pred Cee-EEEEccCC-C-----CcEEEEEecC----C--CCeeEEEEEeCCC----------------eEEEEEecCCCcccc
Confidence 765 34334331 1 1111111111 0 1256778887651 2445555321 1
Q ss_pred Cceeee-ccCC--CceeceeEEecCCcEEEEcCcCCCCCCcccCCCCCCccEEEcCCCCCCCceEecCCCCCCccc--ee
Q 039705 307 ATWQRE-MMPS--PRVMGEMLLLPTGDVLIINGAKKGTAGWNFATDPNTTPVLYEPDDPINERFSELTPTSKPRMC--HS 381 (539)
Q Consensus 307 ~~W~~~-~M~~--~R~~~~~vvlpdG~I~vvGG~~~g~~g~~~~~~~~~~~e~YdP~t~~g~~Wt~~a~~~~~R~y--hs 381 (539)
..|... .++. ...- ..+...++.+++.||.+ | ++.+||..+. +|..+......... -.
T Consensus 237 ~~~~~~~~~~~~h~~~v-~~v~~s~~~~l~s~~~d-g------------~v~iw~~~~~---~~~~~~~~~~~h~~~~v~ 299 (330)
T 2hes_X 237 QEWVCEAILPDVHKRQV-YNVAWGFNGLIASVGAD-G------------VLAVYEEVDG---EWKVFAKRALCHGVYEIN 299 (330)
T ss_dssp EEEEEEEECCSCCSSCE-EEEEECTTSCEEEEETT-S------------CEEEEEEETT---EEEEEEEESCTTTTSCEE
T ss_pred ceeEEeeecccccccce-EEEEEcCCCEEEEEeCC-C------------EEEEEEcCCC---ceEEEeccccccccceEE
Confidence 245543 3321 1111 12333344566677755 2 5789998887 78654321111111 11
Q ss_pred eEeeCC--CCeEEEecCCC
Q 039705 382 TSVVLP--DGKILVAGSNP 398 (539)
Q Consensus 382 ~a~llp--dG~V~v~GG~~ 398 (539)
.....| ||+++++||.+
T Consensus 300 ~v~~~~~~~~~~las~s~D 318 (330)
T 2hes_X 300 VVKWLELNGKTILATGGDD 318 (330)
T ss_dssp EEEEC-----CCEEEEETT
T ss_pred EEEEecCCCceEEEEecCC
Confidence 233456 79999999864
No 39
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=97.56 E-value=0.0088 Score=61.71 Aligned_cols=256 Identities=12% Similarity=0.098 Sum_probs=128.6
Q ss_pred eEEEEECCCCCEEeCccCCCcccccceecCCCcEEEecCCCCCCCeEEEEeCCCCccceeecccccccc-cccceeEEcc
Q 039705 81 LAVEYDAESAAIRPLKILTDTWSSSGGLSANGTIVISGGWSSRGRSVRYLSGCYHACYWKEHHWELSAK-RWFSTQHILP 159 (539)
Q Consensus 81 ~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydP~~~t~~W~~~~~~m~~~-R~y~s~~~L~ 159 (539)
...+||..+.+....-..+.......++.++|+++++|+.+ ..+++||.. +.+-. .. +... ..-.+.+..+
T Consensus 131 ~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D---~~i~iwd~~--~~~~~--~~-~~~h~~~V~~v~~~p 202 (410)
T 1vyh_C 131 TIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSAD---MTIKLWDFQ--GFECI--RT-MHGHDHNVSSVSIMP 202 (410)
T ss_dssp CEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEETT---SCCCEEETT--SSCEE--EC-CCCCSSCEEEEEECS
T ss_pred eEEEEECCCCcEEEEEeccCCcEEEEEEcCCCCEEEEEeCC---CeEEEEeCC--CCcee--EE-EcCCCCCEEEEEEeC
Confidence 36689988776543322232222223445789999999863 568889986 43321 11 2211 1123445566
Q ss_pred CCcEEEEcCccCCeEEEE-ecCCCcceeeccCccccCCCCCCCCcceEEEeeCCcEEEEEcC--ceeEeeCCCCeEEEEc
Q 039705 160 DGSFIVVGGRREFSYEYI-LKEGKRIIYDLPILNETTNPSENNLYPFVFLSTDGNLFIFAND--RSILLNPETNEILHVF 236 (539)
Q Consensus 160 dG~VyvvGG~~~~~~E~y-P~~~~~~w~~~~~l~~~~~~~~~~~yp~~~~~~~G~Iyv~Gg~--~~e~yDp~tn~W~~~~ 236 (539)
+|+.++.|+.+ .++.+| ..+. ... .. +..... ..-.....++|++++.|+. .+.+||..+.+....+
T Consensus 203 ~~~~l~s~s~D-~~i~~wd~~~~--~~~-~~-~~~h~~-----~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~ 272 (410)
T 1vyh_C 203 NGDHIVSASRD-KTIKMWEVQTG--YCV-KT-FTGHRE-----WVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAEL 272 (410)
T ss_dssp SSSEEEEEETT-SEEEEEETTTC--CEE-EE-EECCSS-----CEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEE
T ss_pred CCCEEEEEeCC-CeEEEEECCCC--cEE-EE-EeCCCc-----cEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeEe
Confidence 88888888765 456677 4433 211 00 111100 0111233468999998875 4788999887654333
Q ss_pred ccCCCCCCccCCCccEEecccccC----CCCC-----CCcccEEEEecCCCCCcccccCCCcccccCCceEEEEeeCCCC
Q 039705 237 PILRGGSRNYPASATSALLPIKLQ----DPNS-----NAIRAEVLICGGAKPEAGVLAGKGEFMNALQDCGRIEITNKSA 307 (539)
Q Consensus 237 p~mp~~~r~yp~~g~av~lpl~~~----~~~~-----~~~~g~Iyv~GG~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~ 307 (539)
..- ... .-+....|-... ...+ ....++++++|+.+. ++..+|+.. .
T Consensus 273 ~~h----~~~--v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~----------------~i~iwd~~~--~ 328 (410)
T 1vyh_C 273 REH----RHV--VECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDK----------------TIKMWDVST--G 328 (410)
T ss_dssp CCC----SSC--EEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTS----------------EEEEEETTT--T
T ss_pred cCC----Cce--EEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCC----------------eEEEEECCC--C
Confidence 111 000 000111110000 0000 001266788887651 355566542 1
Q ss_pred ceeeecc--CCCceeceeEEecCCcEEEEcCcCCCCCCcccCCCCCCccEEEcCCCCCCCceEecCCCCCCccceeeEee
Q 039705 308 TWQREMM--PSPRVMGEMLLLPTGDVLIINGAKKGTAGWNFATDPNTTPVLYEPDDPINERFSELTPTSKPRMCHSTSVV 385 (539)
Q Consensus 308 ~W~~~~M--~~~R~~~~~vvlpdG~I~vvGG~~~g~~g~~~~~~~~~~~e~YdP~t~~g~~Wt~~a~~~~~R~yhs~a~l 385 (539)
. ....+ ...... +...-++|+.++.||.+ + ++.+||..+. +....+... ... -....+
T Consensus 329 ~-~~~~~~~h~~~v~-~v~~~~~g~~l~s~s~D-~------------~i~vwd~~~~--~~~~~~~~h-~~~--v~~l~~ 388 (410)
T 1vyh_C 329 M-CLMTLVGHDNWVR-GVLFHSGGKFILSCADD-K------------TLRVWDYKNK--RCMKTLNAH-EHF--VTSLDF 388 (410)
T ss_dssp E-EEEEEECCSSCEE-EEEECSSSSCEEEEETT-T------------EEEEECCTTS--CCCEEEECC-SSC--EEEEEE
T ss_pred c-eEEEEECCCCcEE-EEEEcCCCCEEEEEeCC-C------------eEEEEECCCC--ceEEEEcCC-CCc--EEEEEE
Confidence 1 11111 222222 23456899999988865 2 6789998665 123333211 111 123445
Q ss_pred CCCCeEEEecCCC
Q 039705 386 LPDGKILVAGSNP 398 (539)
Q Consensus 386 lpdG~V~v~GG~~ 398 (539)
.||+..+++|+.+
T Consensus 389 ~~~~~~l~sgs~D 401 (410)
T 1vyh_C 389 HKTAPYVVTGSVD 401 (410)
T ss_dssp CSSSSCEEEEETT
T ss_pred cCCCCEEEEEeCC
Confidence 7899999999864
No 40
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=97.55 E-value=0.015 Score=58.07 Aligned_cols=224 Identities=13% Similarity=0.189 Sum_probs=117.1
Q ss_pred ecCCCcEEEecCCCCCCCeEEEEeCCCCccceeeccccccc-ccccceeEEccCCcEEEEcCccCCeEEEE-ecCCCcce
Q 039705 108 LSANGTIVISGGWSSRGRSVRYLSGCYHACYWKEHHWELSA-KRWFSTQHILPDGSFIVVGGRREFSYEYI-LKEGKRII 185 (539)
Q Consensus 108 ~l~dG~l~v~GG~~~g~~~v~~ydP~~~t~~W~~~~~~m~~-~R~y~s~~~L~dG~VyvvGG~~~~~~E~y-P~~~~~~w 185 (539)
..+||+++++|+.+ ..+++||.. +.+-... +.. ..+-.+++.-++|+.++.||.+ ..+.+| ..+.....
T Consensus 63 ~s~d~~~l~s~s~D---g~v~iWd~~--~~~~~~~---~~~~~~~v~~~~~s~~~~~l~s~~~d-~~v~iw~~~~~~~~~ 133 (340)
T 1got_B 63 WGTDSRLLLSASQD---GKLIIWDSY--TTNKVHA---IPLRSSWVMTCAYAPSGNYVACGGLD-NICSIYNLKTREGNV 133 (340)
T ss_dssp ECTTSSEEEEEETT---TEEEEEETT--TCCEEEE---EECSSSCEEEEEECTTSSEEEEEETT-CEEEEEETTTCSBSC
T ss_pred ECCCCCEEEEEeCC---CcEEEEECC--CCCcceE---eecCCccEEEEEECCCCCEEEEEeCC-CeEEEEECccCCCcc
Confidence 35789999999863 579999987 4332211 221 1223345566789999999876 456677 33321111
Q ss_pred eeccCccccCCCCCCCCcceEEEeeCCcEEEEEc-CceeEeeCCCCeEEEEcccCCCCCCccCCCccEEecccccCCCCC
Q 039705 186 YDLPILNETTNPSENNLYPFVFLSTDGNLFIFAN-DRSILLNPETNEILHVFPILRGGSRNYPASATSALLPIKLQDPNS 264 (539)
Q Consensus 186 ~~~~~l~~~~~~~~~~~yp~~~~~~~G~Iyv~Gg-~~~e~yDp~tn~W~~~~p~mp~~~r~yp~~g~av~lpl~~~~~~~ 264 (539)
.....+....+ ... .+...++++|+..++ ..+.+||..+++....+ .+ .. +....+...
T Consensus 134 ~~~~~~~~h~~----~v~-~~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~---~~-h~-----~~v~~~~~~------ 193 (340)
T 1got_B 134 RVSRELAGHTG----YLS-CCRFLDDNQIVTSSGDTTCALWDIETGQQTTTF---TG-HT-----GDVMSLSLA------ 193 (340)
T ss_dssp EEEEEEECCSS----CEE-EEEEEETTEEEEEETTSCEEEEETTTTEEEEEE---CC-CS-----SCEEEEEEC------
T ss_pred eeEEEecCCCc----cEE-EEEECCCCcEEEEECCCcEEEEECCCCcEEEEE---cC-CC-----CceEEEEEC------
Confidence 11111111110 000 112235676554443 35788999988755332 22 11 111111111
Q ss_pred CCcccEEEEecCCCCCcccccCCCcccccCCceEEEEeeCCCCceeee-ccCCCceeceeEEecCCcEEEEcCcCCCCCC
Q 039705 265 NAIRAEVLICGGAKPEAGVLAGKGEFMNALQDCGRIEITNKSATWQRE-MMPSPRVMGEMLLLPTGDVLIINGAKKGTAG 343 (539)
Q Consensus 265 ~~~~g~Iyv~GG~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~-~M~~~R~~~~~vvlpdG~I~vvGG~~~g~~g 343 (539)
.++++++.|+.+. .+..+|+.. ..-... .-...... +....|||+.+++|+.+ +
T Consensus 194 --~~~~~l~sg~~d~----------------~v~~wd~~~--~~~~~~~~~h~~~v~-~v~~~p~~~~l~s~s~d-~--- 248 (340)
T 1got_B 194 --PDTRLFVSGACDA----------------SAKLWDVRE--GMCRQTFTGHESDIN-AICFFPNGNAFATGSDD-A--- 248 (340)
T ss_dssp --TTSSEEEEEETTS----------------CEEEEETTT--CSEEEEECCCSSCEE-EEEECTTSSEEEEEETT-S---
T ss_pred --CCCCEEEEEeCCC----------------cEEEEECCC--CeeEEEEcCCcCCEE-EEEEcCCCCEEEEEcCC-C---
Confidence 1678888888652 355677542 111111 11222222 33456899999999876 2
Q ss_pred cccCCCCCCccEEEcCCCCCCCceE-ecCCCCCCccceeeEeeCCCCeEEEecCCC
Q 039705 344 WNFATDPNTTPVLYEPDDPINERFS-ELTPTSKPRMCHSTSVVLPDGKILVAGSNP 398 (539)
Q Consensus 344 ~~~~~~~~~~~e~YdP~t~~g~~Wt-~~a~~~~~R~yhs~a~llpdG~V~v~GG~~ 398 (539)
++.+||..+. +-. ........ ..-....+.|||+.+++|+.+
T Consensus 249 ---------~v~iwd~~~~---~~~~~~~~~~~~-~~v~~~~~s~~g~~l~~g~~d 291 (340)
T 1got_B 249 ---------TCRLFDLRAD---QELMTYSHDNII-CGITSVSFSKSGRLLLAGYDD 291 (340)
T ss_dssp ---------CEEEEETTTT---EEEEEECCTTCC-SCEEEEEECTTSSEEEEEETT
T ss_pred ---------cEEEEECCCC---cEEEEEccCCcc-cceEEEEECCCCCEEEEECCC
Confidence 5789998876 322 22111111 111234567999999999863
No 41
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=97.54 E-value=0.019 Score=59.44 Aligned_cols=266 Identities=8% Similarity=-0.009 Sum_probs=123.3
Q ss_pred eEEEEECCCCCEEeCcc--CCCcccccceecC-CCcEEEecCCCCCCCeEEEEeCCCCccceeecccccccccccceeEE
Q 039705 81 LAVEYDAESAAIRPLKI--LTDTWSSSGGLSA-NGTIVISGGWSSRGRSVRYLSGCYHACYWKEHHWELSAKRWFSTQHI 157 (539)
Q Consensus 81 ~~~~yDp~t~~w~~l~~--~~~~~c~~~~~l~-dG~l~v~GG~~~g~~~v~~ydP~~~t~~W~~~~~~m~~~R~y~s~~~ 157 (539)
.+.+||..+++...+.. .+......-.+.+ |+.++++|+.+ ..+++||.. ++........-...-+..+...
T Consensus 143 ~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D---~~v~iwd~~--~~~~~~~~~~~~~~~~~~~~~~ 217 (435)
T 4e54_B 143 DIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSME---GTTRLQDFK--GNILRVFASSDTINIWFCSLDV 217 (435)
T ss_dssp CEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSS---SCEEEEETT--SCEEEEEECCSSCSCCCCCEEE
T ss_pred EEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCC---CEEEEeecc--CCceeEEeccCCCCccEEEEEE
Confidence 36788887765433221 1222222223333 78899998863 578999987 5544332210112223344555
Q ss_pred ccCCcEEEEcCccCCeEEEEecCCCcceeeccCccccCCCCCCCCcceEEEeeCCc-EEEEEcC--ceeEeeCCCCeEEE
Q 039705 158 LPDGSFIVVGGRREFSYEYILKEGKRIIYDLPILNETTNPSENNLYPFVFLSTDGN-LFIFAND--RSILLNPETNEILH 234 (539)
Q Consensus 158 L~dG~VyvvGG~~~~~~E~yP~~~~~~w~~~~~l~~~~~~~~~~~yp~~~~~~~G~-Iyv~Gg~--~~e~yDp~tn~W~~ 234 (539)
-+||+++++|+.++ .+.+|.... +- ...+....+ ... .+...++++ +++.|+. .+.+||.++.+-.
T Consensus 218 ~~~~~~l~~g~~dg-~i~~wd~~~--~~--~~~~~~h~~----~v~-~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~- 286 (435)
T 4e54_B 218 SASSRMVVTGDNVG-NVILLNMDG--KE--LWNLRMHKK----KVT-HVALNPCCDWFLATASVDQTVKIWDLRQVRGK- 286 (435)
T ss_dssp ETTTTEEEEECSSS-BEEEEESSS--CB--CCCSBCCSS----CEE-EEEECTTCSSEEEEEETTSBCCEEETTTCCSS-
T ss_pred CCCCCEEEEEeCCC-cEeeeccCc--ce--eEEEecccc----eEE-eeeecCCCceEEEEecCcceeeEEeccccccc-
Confidence 67899999998764 455662221 11 111111100 000 112234554 7777764 4678998765422
Q ss_pred EcccCCCCCCccCCCccEEecccccCCCCCCCcccEEEEecCCCCCcccccCCCcccccCCceEEEEeeCCCCceeee--
Q 039705 235 VFPILRGGSRNYPASATSALLPIKLQDPNSNAIRAEVLICGGAKPEAGVLAGKGEFMNALQDCGRIEITNKSATWQRE-- 312 (539)
Q Consensus 235 ~~p~mp~~~r~yp~~g~av~lpl~~~~~~~~~~~g~Iyv~GG~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~-- 312 (539)
..+.. ...+.....-+...| +++.++.|+.+. .+..||+......-...
T Consensus 287 --~~~~~---~~~h~~~v~~~~~sp--------dg~~l~s~~~D~----------------~i~iwd~~~~~~~~~~~~~ 337 (435)
T 4e54_B 287 --ASFLY---SLPHRHPVNAACFSP--------DGARLLTTDQKS----------------EIRVYSASQWDCPLGLIPH 337 (435)
T ss_dssp --SCCSB---CCBCSSCEEECCBCT--------TSSEEEEEESSS----------------CEEEEESSSSSSEEEECCC
T ss_pred --ceEEE---eeeccccccceeECC--------CCCeeEEEcCCC----------------EEEEEECCCCccceEEecc
Confidence 11110 000011111111121 677788887652 24456543211001110
Q ss_pred ccCCCc--eeceeEEecCCcEEEEcCcCCCCCCcccCCCCCCccEEEcCCCCCCCceE-ecCCCCCCccceeeEeeCCCC
Q 039705 313 MMPSPR--VMGEMLLLPTGDVLIINGAKKGTAGWNFATDPNTTPVLYEPDDPINERFS-ELTPTSKPRMCHSTSVVLPDG 389 (539)
Q Consensus 313 ~M~~~R--~~~~~vvlpdG~I~vvGG~~~g~~g~~~~~~~~~~~e~YdP~t~~g~~Wt-~~a~~~~~R~yhs~a~llpdG 389 (539)
.....+ ........+++.++++++...+..-. ........+.+||.++. +-. .+.. .....-.+++.+-|||
T Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~-~~~~~~~~i~iwd~~~g---~~~~~l~~-~~~~~v~s~~~fspdg 412 (435)
T 4e54_B 338 PHRHFQHLTPIKAAWHPRYNLIVVGRYPDPNFKS-CTPYELRTIDVFDGNSG---KMMCQLYD-PESSGISSLNEFNPMG 412 (435)
T ss_dssp CCCCCSSSCCCBCEECSSSSCEEEECCCCTTSCC-SSTTCCCCEEEECSSSC---CEEEEECC-SSCCCCCCEEEECTTS
T ss_pred cccccccceeEEEEEcCCCCEEEEEEcCCCCeEE-EEecCCCEEEEEECCCC---cEEEEEeC-CCCCcEEEEEEECCCC
Confidence 111111 00112335677777777654221100 00011125789999887 432 2211 1111112333467999
Q ss_pred eEEEecC
Q 039705 390 KILVAGS 396 (539)
Q Consensus 390 ~V~v~GG 396 (539)
+++++|+
T Consensus 413 ~~lasg~ 419 (435)
T 4e54_B 413 DTLASAM 419 (435)
T ss_dssp SCEEEEC
T ss_pred CEEEEEc
Confidence 9999876
No 42
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=97.53 E-value=0.057 Score=54.77 Aligned_cols=225 Identities=10% Similarity=0.001 Sum_probs=114.3
Q ss_pred eEEEEECCCCCEEeCccCCCcccccceecCCCcEEEecCCCCCCCeEEEEeCCCCccceeecccccccc-cccceeEEcc
Q 039705 81 LAVEYDAESAAIRPLKILTDTWSSSGGLSANGTIVISGGWSSRGRSVRYLSGCYHACYWKEHHWELSAK-RWFSTQHILP 159 (539)
Q Consensus 81 ~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydP~~~t~~W~~~~~~m~~~-R~y~s~~~L~ 159 (539)
...+||..+++.......+......-...++|+++++|+.+ ..+++||.. +.+- ... +... ..-.+.+..+
T Consensus 120 ~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d---~~i~iwd~~--~~~~--~~~-~~~h~~~v~~~~~~~ 191 (420)
T 3vl1_A 120 DIKVLDSNFNLQREIDQAHVSEITKLKFFPSGEALISSSQD---MQLKIWSVK--DGSN--PRT-LIGHRATVTDIAIID 191 (420)
T ss_dssp CEEEECTTSCEEEEETTSSSSCEEEEEECTTSSEEEEEETT---SEEEEEETT--TCCC--CEE-EECCSSCEEEEEEET
T ss_pred CEEEEeCCCcceeeecccccCccEEEEECCCCCEEEEEeCC---CeEEEEeCC--CCcC--ceE-EcCCCCcEEEEEEcC
Confidence 46789988776655433343333334556799999998863 579999986 3321 111 2211 1223445566
Q ss_pred CCcEEEEcCccCCeEEEE-ecCCCcce-eeccCccccCCCC----------------CCCCcceEEEeeCCcEEEEEcC-
Q 039705 160 DGSFIVVGGRREFSYEYI-LKEGKRII-YDLPILNETTNPS----------------ENNLYPFVFLSTDGNLFIFAND- 220 (539)
Q Consensus 160 dG~VyvvGG~~~~~~E~y-P~~~~~~w-~~~~~l~~~~~~~----------------~~~~yp~~~~~~~G~Iyv~Gg~- 220 (539)
||+.++.|+.++ ++.+| ..+. +- ............. ....-..+...++|++++.|+.
T Consensus 192 ~~~~l~s~~~d~-~v~iwd~~~~--~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d 268 (420)
T 3vl1_A 192 RGRNVLSASLDG-TIRLWECGTG--TTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVS 268 (420)
T ss_dssp TTTEEEEEETTS-CEEEEETTTT--EEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETT
T ss_pred CCCEEEEEcCCC-cEEEeECCCC--ceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCC
Confidence 899888888764 45556 3332 11 1111000000000 0000000112368888888875
Q ss_pred -ceeEeeCCCCeEEEEcccCCCCCCccCCCccEEecccccCCCCCCCcccE-EEEecCCCCCcccccCCCcccccCCceE
Q 039705 221 -RSILLNPETNEILHVFPILRGGSRNYPASATSALLPIKLQDPNSNAIRAE-VLICGGAKPEAGVLAGKGEFMNALQDCG 298 (539)
Q Consensus 221 -~~e~yDp~tn~W~~~~p~mp~~~r~yp~~g~av~lpl~~~~~~~~~~~g~-Iyv~GG~~~~~~~~~~~~~~~~a~~s~~ 298 (539)
.+.+||.++.+-...+..- .... .-.....| +++ ++++|+.+. .+.
T Consensus 269 g~i~i~d~~~~~~~~~~~~~---~~~~--v~~~~~~~-----------~~~~~l~~g~~dg----------------~i~ 316 (420)
T 3vl1_A 269 GVITVHNVFSKEQTIQLPSK---FTCS--CNSLTVDG-----------NNANYIYAGYENG----------------MLA 316 (420)
T ss_dssp SCEEEEETTTCCEEEEECCT---TSSC--EEEEEECS-----------SCTTEEEEEETTS----------------EEE
T ss_pred CeEEEEECCCCceeEEcccc---cCCC--ceeEEEeC-----------CCCCEEEEEeCCC----------------eEE
Confidence 4789999887644333111 0010 01112211 455 788887651 356
Q ss_pred EEEeeCCCCceeeeccCCCceeceeEEecCCcEEEEcCcCCCCCCcccCCCCCCccEEEcCCCC
Q 039705 299 RIEITNKSATWQREMMPSPRVMGEMLLLPTGDVLIINGAKKGTAGWNFATDPNTTPVLYEPDDP 362 (539)
Q Consensus 299 ~~d~~~~~~~W~~~~M~~~R~~~~~vvlpdG~I~vvGG~~~g~~g~~~~~~~~~~~e~YdP~t~ 362 (539)
.+|+......-.......... ...+..++|++++.++.+ + ++.+||..+.
T Consensus 317 vwd~~~~~~~~~~~~~~~~~~-v~~~~~~~~~~l~s~~~d-~------------~v~iw~~~~~ 366 (420)
T 3vl1_A 317 QWDLRSPECPVGEFLINEGTP-INNVYFAAGALFVSSGFD-T------------SIKLDIISDP 366 (420)
T ss_dssp EEETTCTTSCSEEEEESTTSC-EEEEEEETTEEEEEETTT-E------------EEEEEEECCT
T ss_pred EEEcCCCcCchhhhhccCCCC-ceEEEeCCCCEEEEecCC-c------------cEEEEeccCC
Confidence 677653211111111111111 233567799999999866 2 5788887663
No 43
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=97.52 E-value=0.0069 Score=60.25 Aligned_cols=241 Identities=12% Similarity=0.109 Sum_probs=122.4
Q ss_pred ecCCCcEEEecCCCCCCCeEEEEeCCCCccceeecccccccccccceeEEc-cC--CcEEEEcCccCCeEEEE-ecCCCc
Q 039705 108 LSANGTIVISGGWSSRGRSVRYLSGCYHACYWKEHHWELSAKRWFSTQHIL-PD--GSFIVVGGRREFSYEYI-LKEGKR 183 (539)
Q Consensus 108 ~l~dG~l~v~GG~~~g~~~v~~ydP~~~t~~W~~~~~~m~~~R~y~s~~~L-~d--G~VyvvGG~~~~~~E~y-P~~~~~ 183 (539)
..+||+++++|+.+ ..+++||.. ..++..... +......-..+.. ++ ++.++.|+.++ .+.+| ..++
T Consensus 19 ~s~~~~~l~~~~~d---g~i~iw~~~--~~~~~~~~~-~~~h~~~v~~~~~~~~~~~~~l~s~~~dg-~v~iwd~~~~-- 89 (379)
T 3jrp_A 19 LDYYGKRLATCSSD---KTIKIFEVE--GETHKLIDT-LTGHEGPVWRVDWAHPKFGTILASCSYDG-KVLIWKEENG-- 89 (379)
T ss_dssp ECSSSSEEEEEETT---SCEEEEEEE--TTEEEEEEE-ECCCSSCEEEEEECCGGGCSEEEEEETTS-CEEEEEEETT--
T ss_pred EcCCCCEEEEEECC---CcEEEEecC--CCcceeeeE-ecCCCCcEEEEEeCCCCCCCEEEEeccCC-EEEEEEcCCC--
Confidence 34689999998753 568888876 555554433 4322222222333 34 88888888764 46677 5544
Q ss_pred ceeeccCccccCCCCCCCCcceEEEeeC--CcEEEEEcCc--eeEeeCCCCeEEEEcccCCCCCCccCCCccEEeccccc
Q 039705 184 IIYDLPILNETTNPSENNLYPFVFLSTD--GNLFIFANDR--SILLNPETNEILHVFPILRGGSRNYPASATSALLPIKL 259 (539)
Q Consensus 184 ~w~~~~~l~~~~~~~~~~~yp~~~~~~~--G~Iyv~Gg~~--~e~yDp~tn~W~~~~p~mp~~~r~yp~~g~av~lpl~~ 259 (539)
+|.....+..... . --.+...++ |+++++|+.+ +.+||..++...... .+.. ... + .-.....|...
T Consensus 90 ~~~~~~~~~~~~~----~-v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~-~~~~-~~~-~-v~~~~~~~~~~ 160 (379)
T 3jrp_A 90 RWSQIAVHAVHSA----S-VNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPI-IIDA-HAI-G-VNSASWAPATI 160 (379)
T ss_dssp EEEEEEEECCCSS----C-EEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEE-EEEC-CTT-C-EEEEEECCCC-
T ss_pred ceeEeeeecCCCc----c-eEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeE-EecC-CCC-c-eEEEEEcCccc
Confidence 4432211111111 0 011233456 8888888754 678998776321011 0111 000 0 00111111000
Q ss_pred --CCCCCCCcccEEEEecCCCCCcccccCCCcccccCCceEEEEeeCCCCceeee-ccCC--CceeceeEEecC---CcE
Q 039705 260 --QDPNSNAIRAEVLICGGAKPEAGVLAGKGEFMNALQDCGRIEITNKSATWQRE-MMPS--PRVMGEMLLLPT---GDV 331 (539)
Q Consensus 260 --~~~~~~~~~g~Iyv~GG~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~-~M~~--~R~~~~~vvlpd---G~I 331 (539)
........+++.+++|+.+. .+..+|+......|... .+.. ... .+....|| +++
T Consensus 161 ~~~~~~~~~~~~~~l~~~~~dg----------------~i~i~d~~~~~~~~~~~~~~~~h~~~v-~~~~~sp~~~~~~~ 223 (379)
T 3jrp_A 161 EEDGEHNGTKESRKFVTGGADN----------------LVKIWKYNSDAQTYVLESTLEGHSDWV-RDVAWSPTVLLRSY 223 (379)
T ss_dssp ---------CTTCEEEEEETTS----------------CEEEEEEETTTTEEEEEEEECCCSSCE-EEEEECCCCSSSEE
T ss_pred cccccccCCCCCCEEEEEeCCC----------------eEEEEEecCCCcceeeEEEEecccCcE-eEEEECCCCCCCCe
Confidence 00000000467788887651 36678886544556554 3332 222 23345688 899
Q ss_pred EEEcCcCCCCCCcccCCCCCCccEEEcCCCCCCCceE-e-cCCCCCCccceeeEeeCCCCeEEEecCCC
Q 039705 332 LIINGAKKGTAGWNFATDPNTTPVLYEPDDPINERFS-E-LTPTSKPRMCHSTSVVLPDGKILVAGSNP 398 (539)
Q Consensus 332 ~vvGG~~~g~~g~~~~~~~~~~~e~YdP~t~~g~~Wt-~-~a~~~~~R~yhs~a~llpdG~V~v~GG~~ 398 (539)
+++|+.+ | .+.+||..+... .+. . ......... -....+.|||+.+++|+.+
T Consensus 224 l~s~~~d-g------------~i~iwd~~~~~~-~~~~~~~~~~~~~~~-v~~~~~s~~g~~l~~~~~d 277 (379)
T 3jrp_A 224 LASVSQD-R------------TCIIWTQDNEQG-PWKKTLLKEEKFPDV-LWRASWSLSGNVLALSGGD 277 (379)
T ss_dssp EEEEETT-S------------CEEEEEESSTTS-CCEEEESSSSCCSSC-EEEEEECSSSCCEEEEESS
T ss_pred EEEEeCC-C------------EEEEEeCCCCCc-cceeeeeccccCCCc-EEEEEEcCCCCEEEEecCC
Confidence 9998865 2 578999887621 121 1 111111111 2234567999999998864
No 44
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=97.52 E-value=0.027 Score=55.25 Aligned_cols=129 Identities=11% Similarity=0.150 Sum_probs=69.4
Q ss_pred eEEEEECCCCCEEeCccCCCcccccceecCCCc-EEEecCCCCCCCeEEEEeCCCCccce-eecccccccccccce-eEE
Q 039705 81 LAVEYDAESAAIRPLKILTDTWSSSGGLSANGT-IVISGGWSSRGRSVRYLSGCYHACYW-KEHHWELSAKRWFST-QHI 157 (539)
Q Consensus 81 ~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~-l~v~GG~~~g~~~v~~ydP~~~t~~W-~~~~~~m~~~R~y~s-~~~ 157 (539)
...+||+.+++............ ..++.+||+ +|+++.. ...+.+||+. +.+. ... +........ .+.
T Consensus 21 ~v~~~d~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~---~~~i~~~d~~--~~~~~~~~---~~~~~~~~~~~~~ 91 (331)
T 3u4y_A 21 RISFFSTDTLEILNQITLGYDFV-DTAITSDCSNVVVTSDF---CQTLVQIETQ--LEPPKVVA---IQEGQSSMADVDI 91 (331)
T ss_dssp EEEEEETTTCCEEEEEECCCCEE-EEEECSSSCEEEEEEST---TCEEEEEECS--SSSCEEEE---EEECSSCCCCEEE
T ss_pred eEEEEeCcccceeeeEEccCCcc-eEEEcCCCCEEEEEeCC---CCeEEEEECC--CCceeEEe---cccCCCCccceEE
Confidence 46688999888765433322222 345567887 5555442 3589999998 5543 111 222221122 455
Q ss_pred ccCCcEEEEcCccCC--eEEEE-ecCCCccee-eccCccccCCCCCCCCcce-EEEeeCCc-EEEEEc--Cc-eeEeeCC
Q 039705 158 LPDGSFIVVGGRREF--SYEYI-LKEGKRIIY-DLPILNETTNPSENNLYPF-VFLSTDGN-LFIFAN--DR-SILLNPE 228 (539)
Q Consensus 158 L~dG~VyvvGG~~~~--~~E~y-P~~~~~~w~-~~~~l~~~~~~~~~~~yp~-~~~~~~G~-Iyv~Gg--~~-~e~yDp~ 228 (539)
-+||+.++++...+. .+.+| ..+. +.. ..+. . ..|+ ....+||+ ||+... .. ..+||..
T Consensus 92 s~dg~~l~~~~~~~~~~~i~v~d~~~~--~~~~~~~~---~-------~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~ 159 (331)
T 3u4y_A 92 TPDDQFAVTVTGLNHPFNMQSYSFLKN--KFISTIPI---P-------YDAVGIAISPNGNGLILIDRSSANTVRRFKID 159 (331)
T ss_dssp CTTSSEEEECCCSSSSCEEEEEETTTT--EEEEEEEC---C-------TTEEEEEECTTSSCEEEEEETTTTEEEEEEEC
T ss_pred CCCCCEEEEecCCCCcccEEEEECCCC--CeEEEEEC---C-------CCccceEECCCCCEEEEEecCCCceEEEEEEC
Confidence 678886555544433 77788 5443 322 1111 0 1122 34457886 777754 44 6777765
Q ss_pred CC
Q 039705 229 TN 230 (539)
Q Consensus 229 tn 230 (539)
.+
T Consensus 160 ~~ 161 (331)
T 3u4y_A 160 AD 161 (331)
T ss_dssp TT
T ss_pred CC
Confidence 43
No 45
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=97.49 E-value=0.015 Score=56.69 Aligned_cols=220 Identities=15% Similarity=0.153 Sum_probs=117.9
Q ss_pred eecCCCcEEEecCCCCCCCeEEEEeCCCCcccee-eccccc---ccccccceeEEccCCcEEEEcCccCCeEEEE-ecCC
Q 039705 107 GLSANGTIVISGGWSSRGRSVRYLSGCYHACYWK-EHHWEL---SAKRWFSTQHILPDGSFIVVGGRREFSYEYI-LKEG 181 (539)
Q Consensus 107 ~~l~dG~l~v~GG~~~g~~~v~~ydP~~~t~~W~-~~~~~m---~~~R~y~s~~~L~dG~VyvvGG~~~~~~E~y-P~~~ 181 (539)
...++|+++++|+ + ..+++||.. +.... .... + .....-.+.+..+||+.+++|+.+ ..+.+| ..+.
T Consensus 58 ~~~~~~~~l~~~~--d--g~i~iw~~~--~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~l~~~~~d-~~i~~~d~~~~ 129 (337)
T 1gxr_A 58 TISNPTRHVYTGG--K--GCVKVWDIS--HPGNKSPVSQ-LDCLNRDNYIRSCKLLPDGCTLIVGGEA-STLSIWDLAAP 129 (337)
T ss_dssp EECSSSSEEEEEC--B--SEEEEEETT--STTCCSCSEE-EECSCTTSBEEEEEECTTSSEEEEEESS-SEEEEEECCCC
T ss_pred EEecCCcEEEEcC--C--CeEEEEECC--CCCceeeeec-ccccCCCCcEEEEEEcCCCCEEEEEcCC-CcEEEEECCCC
Confidence 4457899999988 2 578999986 43221 1111 1 122222345556689988888765 356677 4443
Q ss_pred CcceeeccCccccCCCCCCCCcceEEEeeCCcEEEEEcC--ceeEeeCCCCeEEEEcccCCCCCCccCCCccEEeccccc
Q 039705 182 KRIIYDLPILNETTNPSENNLYPFVFLSTDGNLFIFAND--RSILLNPETNEILHVFPILRGGSRNYPASATSALLPIKL 259 (539)
Q Consensus 182 ~~~w~~~~~l~~~~~~~~~~~yp~~~~~~~G~Iyv~Gg~--~~e~yDp~tn~W~~~~p~mp~~~r~yp~~g~av~lpl~~ 259 (539)
+......+..... . --.....++|+.++.|+. .+.+||.++++..+.+..... .. ....+.|
T Consensus 130 --~~~~~~~~~~~~~----~-i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~--~i----~~~~~~~--- 193 (337)
T 1gxr_A 130 --TPRIKAELTSSAP----A-CYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTD--GA----SCIDISN--- 193 (337)
T ss_dssp ----EEEEEEECSSS----C-EEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSS--CE----EEEEECT---
T ss_pred --CcceeeecccCCC----c-eEEEEECCCCCEEEEEeCCCcEEEEeCCCCceeeeeecccC--ce----EEEEECC---
Confidence 3211111111100 0 001233468888888874 478899998876533321110 00 1112211
Q ss_pred CCCCCCCcccEEEEecCCCCCcccccCCCcccccCCceEEEEeeCCCCceeee-ccCCCceeceeEEecCCcEEEEcCcC
Q 039705 260 QDPNSNAIRAEVLICGGAKPEAGVLAGKGEFMNALQDCGRIEITNKSATWQRE-MMPSPRVMGEMLLLPTGDVLIINGAK 338 (539)
Q Consensus 260 ~~~~~~~~~g~Iyv~GG~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~-~M~~~R~~~~~vvlpdG~I~vvGG~~ 338 (539)
+++.+++|+.+. .+..+|+.. .+-... ....+ -......|||+.+++|+.+
T Consensus 194 --------~~~~l~~~~~dg----------------~i~~~d~~~--~~~~~~~~~~~~--v~~~~~s~~~~~l~~~~~~ 245 (337)
T 1gxr_A 194 --------DGTKLWTGGLDN----------------TVRSWDLRE--GRQLQQHDFTSQ--IFSLGYCPTGEWLAVGMES 245 (337)
T ss_dssp --------TSSEEEEEETTS----------------EEEEEETTT--TEEEEEEECSSC--EEEEEECTTSSEEEEEETT
T ss_pred --------CCCEEEEEecCC----------------cEEEEECCC--CceEeeecCCCc--eEEEEECCCCCEEEEEcCC
Confidence 566777777541 355677642 211111 22221 2233456899999998765
Q ss_pred CCCCCcccCCCCCCccEEEcCCCCCCCceEecCCCCCCccceeeEeeCCCCeEEEecCC
Q 039705 339 KGTAGWNFATDPNTTPVLYEPDDPINERFSELTPTSKPRMCHSTSVVLPDGKILVAGSN 397 (539)
Q Consensus 339 ~g~~g~~~~~~~~~~~e~YdP~t~~g~~Wt~~a~~~~~R~yhs~a~llpdG~V~v~GG~ 397 (539)
+ .+.+||..+. +-..+.... . .-....+.|||+.+++|+.
T Consensus 246 -~------------~i~~~~~~~~---~~~~~~~~~--~-~v~~~~~~~~~~~l~~~~~ 285 (337)
T 1gxr_A 246 -S------------NVEVLHVNKP---DKYQLHLHE--S-CVLSLKFAYCGKWFVSTGK 285 (337)
T ss_dssp -S------------CEEEEETTSS---CEEEECCCS--S-CEEEEEECTTSSEEEEEET
T ss_pred -C------------cEEEEECCCC---CeEEEcCCc--c-ceeEEEECCCCCEEEEecC
Confidence 2 5789999887 433322111 1 1223456789999999886
No 46
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=97.46 E-value=0.037 Score=54.86 Aligned_cols=178 Identities=10% Similarity=0.079 Sum_probs=86.8
Q ss_pred CCceEEccC-CCcccceEEEecCCCCEEEEEccccCCCCCccCCCcccccCCCccccccccceeEEEEECCCCCEEeCcc
Q 039705 19 KGKWELASE-NSGISAMHIILFPNTNKAIMLDAVSLGPSNVRLPVGIYRLNPGAWQKYVDYRALAVEYDAESAAIRPLKI 97 (539)
Q Consensus 19 ~g~W~~~~~-~~~~~~~~~~ll~~~gkv~~~g~~~~~~~~~~~~~g~~~~~~~~~~g~~~~~~~~~~yDp~t~~w~~l~~ 97 (539)
.|+++.+.. .....+..+++- ++|++|+.+... . .....+||..+++++.+..
T Consensus 27 tg~~~~~~~~~~~~~p~~~a~s-pdg~l~~~~~~~--~-----------------------~~~v~~~~~~~g~~~~~~~ 80 (347)
T 3hfq_A 27 AKTLTNDGLLAATQNPTYLALS-AKDCLYSVDKED--D-----------------------EGGIAAWQIDGQTAHKLNT 80 (347)
T ss_dssp TTEEEEEEEEEECSCCCCEEEC-TTCEEEEEEEET--T-----------------------EEEEEEEEEETTEEEEEEE
T ss_pred CCeEEEeeeeeccCCcceEEEc-cCCeEEEEEecC--C-----------------------CceEEEEEecCCcEEEeee
Confidence 466655321 112334456665 899977665421 0 0135678887777766543
Q ss_pred C--CCcccccceecCCCcEEEecCCCCCCCeEEEEeCCCCccceeeccccccc------cc----ccceeEEccCCcEEE
Q 039705 98 L--TDTWSSSGGLSANGTIVISGGWSSRGRSVRYLSGCYHACYWKEHHWELSA------KR----WFSTQHILPDGSFIV 165 (539)
Q Consensus 98 ~--~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydP~~~t~~W~~~~~~m~~------~R----~y~s~~~L~dG~Vyv 165 (539)
. .......-++.+||+.+++.+.. ...+.+||... ..+...+.. +.. .| .-...+.-+||++|+
T Consensus 81 ~~~~~~~p~~~a~spdg~~l~~~~~~--~~~v~v~~~~~-~g~~~~~~~-~~~~~~~p~~~~~~~~~~~~~~spdg~l~v 156 (347)
T 3hfq_A 81 VVAPGTPPAYVAVDEARQLVYSANYH--KGTAEVMKIAA-DGALTLTDT-VQHSGHGPRPEQDGSHIHYTDLTPDNRLAV 156 (347)
T ss_dssp EEEESCCCSEEEEETTTTEEEEEETT--TTEEEEEEECT-TSCEEEEEE-EECCCCCSSTTCSSCCEEEEEECTTSCEEE
T ss_pred eecCCCCCEEEEECCCCCEEEEEeCC--CCEEEEEEeCC-CCCeeecce-eecCCCCCCccccCCCceEEEECCCCcEEE
Confidence 2 11122233556899866655432 25788888641 223332221 111 01 122356667999666
Q ss_pred EcCccCCeEEEE-ecCCCcceeeccCccccCCCCCCCCcce-EEEeeCCc-EEEEEc--CceeEeeCC--CCeEE
Q 039705 166 VGGRREFSYEYI-LKEGKRIIYDLPILNETTNPSENNLYPF-VFLSTDGN-LFIFAN--DRSILLNPE--TNEIL 233 (539)
Q Consensus 166 vGG~~~~~~E~y-P~~~~~~w~~~~~l~~~~~~~~~~~yp~-~~~~~~G~-Iyv~Gg--~~~e~yDp~--tn~W~ 233 (539)
.+. ....+.+| ...+ .+.......... ....|. +...+||+ ||+.+. ..+.+||.. ++++.
T Consensus 157 ~~~-~~~~v~~~~~~~~-g~~~~~~~~~~~-----~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~ 224 (347)
T 3hfq_A 157 IDL-GSDKVYVYNVSDA-GQLSEQSVLTME-----AGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFT 224 (347)
T ss_dssp EET-TTTEEEEEEECTT-SCEEEEEEEECC-----TTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEE
T ss_pred EeC-CCCEEEEEEECCC-CcEEEeeeEEcC-----CCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceE
Confidence 543 33467777 4422 122211100000 011222 34557998 776654 345566544 56654
No 47
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=97.45 E-value=0.027 Score=57.52 Aligned_cols=108 Identities=19% Similarity=0.190 Sum_probs=63.6
Q ss_pred ceecCCCcEEEecCCCCCCCeEEEEeCCCCccceeeccccccc-ccccceeEEccCCcEEEEcCccCCeEEEE-ecCCCc
Q 039705 106 GGLSANGTIVISGGWSSRGRSVRYLSGCYHACYWKEHHWELSA-KRWFSTQHILPDGSFIVVGGRREFSYEYI-LKEGKR 183 (539)
Q Consensus 106 ~~~l~dG~l~v~GG~~~g~~~v~~ydP~~~t~~W~~~~~~m~~-~R~y~s~~~L~dG~VyvvGG~~~~~~E~y-P~~~~~ 183 (539)
.++.+||+.+++|+.+ ..+++||.. +.+-... +.. ...-.+.+..+||+.++.|+.+ .++.+| ..+.
T Consensus 129 v~~s~dg~~l~s~~~d---~~i~iwd~~--~~~~~~~---~~~h~~~v~~~~~~p~~~~l~s~s~d-~~v~iwd~~~~-- 197 (393)
T 1erj_A 129 VCFSPDGKFLATGAED---RLIRIWDIE--NRKIVMI---LQGHEQDIYSLDYFPSGDKLVSGSGD-RTVRIWDLRTG-- 197 (393)
T ss_dssp EEECTTSSEEEEEETT---SCEEEEETT--TTEEEEE---ECCCSSCEEEEEECTTSSEEEEEETT-SEEEEEETTTT--
T ss_pred EEECCCCCEEEEEcCC---CeEEEEECC--CCcEEEE---EccCCCCEEEEEEcCCCCEEEEecCC-CcEEEEECCCC--
Confidence 3456799999999863 579999987 5433221 221 1222344556789888888765 456677 4433
Q ss_pred cee-eccCccccCCCCCCCCcceEEEee-CCcEEEEEcC--ceeEeeCCCCeEE
Q 039705 184 IIY-DLPILNETTNPSENNLYPFVFLST-DGNLFIFAND--RSILLNPETNEIL 233 (539)
Q Consensus 184 ~w~-~~~~l~~~~~~~~~~~yp~~~~~~-~G~Iyv~Gg~--~~e~yDp~tn~W~ 233 (539)
+.. .... . + . -..+...+ +|++++.|+. .+.+||..+++..
T Consensus 198 ~~~~~~~~---~-~----~-v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~ 242 (393)
T 1erj_A 198 QCSLTLSI---E-D----G-VTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLV 242 (393)
T ss_dssp EEEEEEEC---S-S----C-EEEEEECSTTCCEEEEEETTSCEEEEETTTCCEE
T ss_pred eeEEEEEc---C-C----C-cEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEE
Confidence 221 1111 0 0 0 01123345 8899998875 4788999887654
No 48
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=97.41 E-value=0.046 Score=54.64 Aligned_cols=93 Identities=15% Similarity=-0.041 Sum_probs=50.6
Q ss_pred eEEEEECCCCCEEeCccCCCcccccceecCCCcEEEecCCC-CCCCeEEEEe--CCCCccceeecccccccccccceeEE
Q 039705 81 LAVEYDAESAAIRPLKILTDTWSSSGGLSANGTIVISGGWS-SRGRSVRYLS--GCYHACYWKEHHWELSAKRWFSTQHI 157 (539)
Q Consensus 81 ~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~l~v~GG~~-~g~~~v~~yd--P~~~t~~W~~~~~~m~~~R~y~s~~~ 157 (539)
+...+|+++++++.+.......-..-++.+||+.+.++... +....+.+|+ +. +.+.+.+.. ....-..+....
T Consensus 30 ~~~~~d~~~g~~~~~~~~~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~--~g~~~~~~~-~~~~~~~p~~~~ 106 (361)
T 3scy_A 30 YTFRFNEETGESLPLSDAEVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKE--KGTLHLLNT-QKTMGADPCYLT 106 (361)
T ss_dssp EEEEEETTTCCEEEEEEEECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETT--TTEEEEEEE-EECSSSCEEEEE
T ss_pred EEEEEeCCCCCEEEeecccCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCC--CCcEEEeeE-eccCCCCcEEEE
Confidence 45567899998887654322222233556889855555432 1234666554 44 455655543 332222344444
Q ss_pred ccCCcEEEEcCccCCeEEEE
Q 039705 158 LPDGSFIVVGGRREFSYEYI 177 (539)
Q Consensus 158 L~dG~VyvvGG~~~~~~E~y 177 (539)
+ ||+.+++......++.+|
T Consensus 107 ~-dg~~l~~~~~~~~~v~~~ 125 (361)
T 3scy_A 107 T-NGKNIVTANYSGGSITVF 125 (361)
T ss_dssp E-CSSEEEEEETTTTEEEEE
T ss_pred E-CCCEEEEEECCCCEEEEE
Confidence 5 777555555545667777
No 49
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=97.37 E-value=0.1 Score=49.41 Aligned_cols=216 Identities=15% Similarity=0.109 Sum_probs=107.6
Q ss_pred eecCCCcEEE-ecCCCCCCCeEEEEeCCCCccceeeccc-ccccccccceeEEccCCcEEEEcCccCCeEEEE-ecCCCc
Q 039705 107 GLSANGTIVI-SGGWSSRGRSVRYLSGCYHACYWKEHHW-ELSAKRWFSTQHILPDGSFIVVGGRREFSYEYI-LKEGKR 183 (539)
Q Consensus 107 ~~l~dG~l~v-~GG~~~g~~~v~~ydP~~~t~~W~~~~~-~m~~~R~y~s~~~L~dG~VyvvGG~~~~~~E~y-P~~~~~ 183 (539)
+...+|++|+ .... ...+.+||+. +........ .+.. -.+.+.-+||++|+... ...+.+| +...
T Consensus 30 ~~~~~g~l~v~~~~~---~~~i~~~~~~--~~~~~~~~~~~~~~---p~~i~~~~~g~l~v~~~--~~~i~~~d~~~~-- 97 (270)
T 1rwi_B 30 AVDSAGNVYVTSEGM---YGRVVKLATG--STGTTVLPFNGLYQ---PQGLAVDGAGTVYVTDF--NNRVVTLAAGSN-- 97 (270)
T ss_dssp EECTTCCEEEEECSS---SCEEEEECC-------EECCCCSCCS---CCCEEECTTCCEEEEET--TTEEEEECTTCS--
T ss_pred EECCCCCEEEEccCC---CCcEEEecCC--CcccceEeeCCcCC---cceeEECCCCCEEEEcC--CCEEEEEeCCCc--
Confidence 3446899998 5332 3578889987 544333221 0111 12345556899999876 3455566 5432
Q ss_pred ceeeccCccccCCCCCCCCcceEEEe-eCCcEEEEEc--CceeEeeCCCCeEEEEcccCCCCCCccCCCccEEecccccC
Q 039705 184 IIYDLPILNETTNPSENNLYPFVFLS-TDGNLFIFAN--DRSILLNPETNEILHVFPILRGGSRNYPASATSALLPIKLQ 260 (539)
Q Consensus 184 ~w~~~~~l~~~~~~~~~~~yp~~~~~-~~G~Iyv~Gg--~~~e~yDp~tn~W~~~~p~mp~~~r~yp~~g~av~lpl~~~ 260 (539)
........ . ...|...+. ++|+||+... ..+.+||..+.... .... . .-..| .+.+ +-
T Consensus 98 ~~~~~~~~-~-------~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~-~~~~--~-~~~~p-~~i~-~~----- 158 (270)
T 1rwi_B 98 NQTVLPFD-G-------LNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQT-VLPF--T-GLNDP-DGVA-VD----- 158 (270)
T ss_dssp CCEECCCC-S-------CSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCE-ECCC--C-SCCSC-CCEE-EC-----
T ss_pred eEeeeecC-C-------cCCCcceEECCCCCEEEEECCCCEEEEEECCCceeE-eecc--c-cCCCc-eeEE-Ee-----
Confidence 22111110 0 123444444 5899999763 45778887766543 2211 1 11122 1222 21
Q ss_pred CCCCCCcccEEEEecCCCCCcccccCCCcccccCCceEEEEeeCCCCceee-e-ccCCCceeceeEEecCCcEEEEcCcC
Q 039705 261 DPNSNAIRAEVLICGGAKPEAGVLAGKGEFMNALQDCGRIEITNKSATWQR-E-MMPSPRVMGEMLLLPTGDVLIINGAK 338 (539)
Q Consensus 261 ~~~~~~~~g~Iyv~GG~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~-~-~M~~~R~~~~~vvlpdG~I~vvGG~~ 338 (539)
.+++||+....+ ..+.+||+.. ...... . .+..++ +.++-++|+|||....+
T Consensus 159 ------~~g~l~v~~~~~----------------~~i~~~~~~~-~~~~~~~~~~~~~p~---~i~~d~~g~l~v~~~~~ 212 (270)
T 1rwi_B 159 ------NSGNVYVTDTDN----------------NRVVKLEAES-NNQVVLPFTDITAPW---GIAVDEAGTVYVTEHNT 212 (270)
T ss_dssp ------TTCCEEEEEGGG----------------TEEEEECTTT-CCEEECCCSSCCSEE---EEEECTTCCEEEEETTT
T ss_pred ------CCCCEEEEECCC----------------CEEEEEecCC-CceEeecccCCCCce---EEEECCCCCEEEEECCC
Confidence 167888875422 2356676532 111111 1 222222 33445789999976433
Q ss_pred CCCCCcccCCCCCCccEEEcCCCCCCCceEecCCCCCCccceeeEeeCCCCeEEEecCC
Q 039705 339 KGTAGWNFATDPNTTPVLYEPDDPINERFSELTPTSKPRMCHSTSVVLPDGKILVAGSN 397 (539)
Q Consensus 339 ~g~~g~~~~~~~~~~~e~YdP~t~~g~~Wt~~a~~~~~R~yhs~a~llpdG~V~v~GG~ 397 (539)
..+.+||++.. .-........ ..-++ ..+.+||++||+...
T Consensus 213 -------------~~v~~~~~~~~---~~~~~~~~~~-~~p~~-i~~~~~g~l~v~~~~ 253 (270)
T 1rwi_B 213 -------------NQVVKLLAGST---TSTVLPFTGL-NTPLA-VAVDSDRTVYVADRG 253 (270)
T ss_dssp -------------SCEEEECTTCS---CCEECCCCSC-SCEEE-EEECTTCCEEEEEGG
T ss_pred -------------CcEEEEcCCCC---cceeeccCCC-CCcee-EEECCCCCEEEEECC
Confidence 15788999776 3333221111 11223 345689999998664
No 50
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=97.35 E-value=0.061 Score=54.55 Aligned_cols=259 Identities=14% Similarity=0.183 Sum_probs=125.5
Q ss_pred eEEEEECCCCCEEeCccCCCcccccceecCCCcEEEecCCCCCCCeEEEEeCCCCccceeec----ccccccccccc-ee
Q 039705 81 LAVEYDAESAAIRPLKILTDTWSSSGGLSANGTIVISGGWSSRGRSVRYLSGCYHACYWKEH----HWELSAKRWFS-TQ 155 (539)
Q Consensus 81 ~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydP~~~t~~W~~~----~~~m~~~R~y~-s~ 155 (539)
...+||..+.+-...-..+.......++.+||+.+++||.+ ..+++||.. +..-... ...+.....+. ++
T Consensus 89 ~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~~g~~las~~~d---~~v~iw~~~--~~~~~~~~~~~~~~~~gh~~~v~~~ 163 (380)
T 3iz6_a 89 RLIVWNALTSQKTHAIKLHCPWVMECAFAPNGQSVACGGLD---SACSIFNLS--SQADRDGNMPVSRVLTGHKGYASSC 163 (380)
T ss_dssp EEEEEETTTTEEEEEEECCCTTCCCCEECTTSSEEEECCSS---SCCEEEECC--CCSSCCCSSTTCCBCCCCSSCCCCC
T ss_pred eEEEEECCCCccceEEecCCCCEEEEEECCCCCEEEEeeCC---CcEEEEECC--CCccccCCccceeeccCCCcceEEE
Confidence 46789998876544333333333344567899999999974 567788865 2211110 00011111111 22
Q ss_pred EEccC-CcEEEEcCccCCeEEEE-ecCCCccee-ec--cCccccCCCCCCCCcceEEEeeCCcEEEEEcC--ceeEeeCC
Q 039705 156 HILPD-GSFIVVGGRREFSYEYI-LKEGKRIIY-DL--PILNETTNPSENNLYPFVFLSTDGNLFIFAND--RSILLNPE 228 (539)
Q Consensus 156 ~~L~d-G~VyvvGG~~~~~~E~y-P~~~~~~w~-~~--~~l~~~~~~~~~~~yp~~~~~~~G~Iyv~Gg~--~~e~yDp~ 228 (539)
...++ +..++.|+.+ .++.+| ..++ +.. .. ........ ......+...++++++.|+. .+.+||.+
T Consensus 164 ~~~~~~~~~l~s~s~D-~~i~~wd~~~~--~~~~~~~~~~~~~h~~----~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~ 236 (380)
T 3iz6_a 164 QYVPDQETRLITGSGD-QTCVLWDVTTG--QRISIFGSEFPSGHTA----DVLSLSINSLNANMFISGSCDTTVRLWDLR 236 (380)
T ss_dssp BCCSSSSSCEEEECTT-SCEEEECTTTC--CEEEEECCCSSSSCCS----CEEEEEECSSSCCEEEEEETTSCEEEEETT
T ss_pred EEecCCCCEEEEECCC-CcEEEEEcCCC--cEEEEeecccCCCCcc----CeEEEEeecCCCCEEEEEECCCeEEEEECC
Confidence 23333 4456666654 456677 4443 221 11 11111100 00100011137899999885 47889986
Q ss_pred CCeEEEEcccCCCCCCccCCCccEEecccccCCCCCCCcccEEEEecCCCCCcccccCCCcccccCCceEEEEeeCCCC-
Q 039705 229 TNEILHVFPILRGGSRNYPASATSALLPIKLQDPNSNAIRAEVLICGGAKPEAGVLAGKGEFMNALQDCGRIEITNKSA- 307 (539)
Q Consensus 229 tn~W~~~~p~mp~~~r~yp~~g~av~lpl~~~~~~~~~~~g~Iyv~GG~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~- 307 (539)
...- .+..+.+ .... --+....| +++.++.|+.+. ++..+|+.....
T Consensus 237 ~~~~--~~~~~~~-h~~~--v~~v~~~p-----------~~~~l~s~s~D~----------------~i~lwd~~~~~~~ 284 (380)
T 3iz6_a 237 ITSR--AVRTYHG-HEGD--INSVKFFP-----------DGQRFGTGSDDG----------------TCRLFDMRTGHQL 284 (380)
T ss_dssp TTCC--CCEEECC-CSSC--CCEEEECT-----------TSSEEEEECSSS----------------CEEEEETTTTEEE
T ss_pred CCCc--ceEEECC-cCCC--eEEEEEec-----------CCCeEEEEcCCC----------------eEEEEECCCCcEE
Confidence 4321 1111121 1110 01222322 678888888762 345566542100
Q ss_pred -ceeeecc--CCCc-eeceeEEecCCcEEEEcCcCCCCCCcccCCCCCCccEEEcCCCCCCCce-EecCCCCCCcc-cee
Q 039705 308 -TWQREMM--PSPR-VMGEMLLLPTGDVLIINGAKKGTAGWNFATDPNTTPVLYEPDDPINERF-SELTPTSKPRM-CHS 381 (539)
Q Consensus 308 -~W~~~~M--~~~R-~~~~~vvlpdG~I~vvGG~~~g~~g~~~~~~~~~~~e~YdP~t~~g~~W-t~~a~~~~~R~-yhs 381 (539)
.+..... .... .-.....-|+|++++.|+.+ | .+.+||..+. +- ..+..+...+. .-.
T Consensus 285 ~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d-g------------~i~vwd~~~~---~~~~~~~~~~~~h~~~v~ 348 (380)
T 3iz6_a 285 QVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSN-G------------DCYVWDTLLA---EMVLNLGTLQNSHEGRIS 348 (380)
T ss_dssp EEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTT-S------------CEEEEETTTC---CEEEEECCSCSSCCCCCC
T ss_pred EEecccccccccccCceEEEEECCCCCEEEEEECC-C------------CEEEEECCCC---ceEEEEecccCCCCCceE
Confidence 1111100 0000 01233456899999998765 2 5789998776 43 23322211111 012
Q ss_pred eEeeCCCCeEEEecCCCC
Q 039705 382 TSVVLPDGKILVAGSNPH 399 (539)
Q Consensus 382 ~a~llpdG~V~v~GG~~~ 399 (539)
...+-|||+.+++||.+.
T Consensus 349 ~l~~s~dg~~l~sgs~D~ 366 (380)
T 3iz6_a 349 CLGLSSDGSALCTGSWDK 366 (380)
T ss_dssp EEEECSSSSEEEEECTTS
T ss_pred EEEECCCCCEEEEeeCCC
Confidence 344679999999999743
No 51
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=97.33 E-value=0.0016 Score=65.50 Aligned_cols=232 Identities=15% Similarity=0.127 Sum_probs=114.5
Q ss_pred eecCCCcEEEecCCCCCCCeEEEEeCCCCccceeeccccccccc-ccceeEEccCCcEEEEcCccCCeEEEE-ecCCCcc
Q 039705 107 GLSANGTIVISGGWSSRGRSVRYLSGCYHACYWKEHHWELSAKR-WFSTQHILPDGSFIVVGGRREFSYEYI-LKEGKRI 184 (539)
Q Consensus 107 ~~l~dG~l~v~GG~~~g~~~v~~ydP~~~t~~W~~~~~~m~~~R-~y~s~~~L~dG~VyvvGG~~~~~~E~y-P~~~~~~ 184 (539)
+..+||+++++|+.. ..+++||.. +..|..... +.... .-.+.+..+||+.++.|+.++ ++.+| ..+. .
T Consensus 18 ~~s~~g~~l~~~~~d---~~i~iw~~~--~~~~~~~~~-~~~h~~~v~~~~~s~~~~~l~s~s~d~-~v~vwd~~~~--~ 88 (377)
T 3dwl_C 18 AFNSQRTEFVTTTAT---NQVELYEQD--GNGWKHART-FSDHDKIVTCVDWAPKSNRIVTCSQDR-NAYVYEKRPD--G 88 (377)
T ss_dssp EECSSSSEEECCCSS---SCBCEEEEE--TTEEEECCC-BCCCSSCEEEEEECTTTCCEEEEETTS-SEEEC--------
T ss_pred EECCCCCEEEEecCC---CEEEEEEcc--CCceEEEEE-EecCCceEEEEEEeCCCCEEEEEeCCC-eEEEEEcCCC--C
Confidence 345789999998763 568889987 777766654 54322 223345566888888888664 45666 4433 2
Q ss_pred -eeeccCccccCCCCCCCCcceEEEeeCCcEEEEEcC--ceeEeeCCCCe-EEEEcccCCCCCCccCCCccEEecccccC
Q 039705 185 -IYDLPILNETTNPSENNLYPFVFLSTDGNLFIFAND--RSILLNPETNE-ILHVFPILRGGSRNYPASATSALLPIKLQ 260 (539)
Q Consensus 185 -w~~~~~l~~~~~~~~~~~yp~~~~~~~G~Iyv~Gg~--~~e~yDp~tn~-W~~~~p~mp~~~r~yp~~g~av~lpl~~~ 260 (539)
|.....+..... . --.+...++|++++.|+. .+.+||..+++ |. ....+... + .+...-+...
T Consensus 89 ~~~~~~~~~~~~~----~-v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~-~~~~~~~~--h---~~~v~~~~~~-- 155 (377)
T 3dwl_C 89 TWKQTLVLLRLNR----A-ATFVRWSPNEDKFAVGSGARVISVCYFEQENDWW-VSKHLKRP--L---RSTILSLDWH-- 155 (377)
T ss_dssp CCCCEEECCCCSS----C-EEEEECCTTSSCCEEEESSSCEEECCC-----CC-CCEEECSS--C---CSCEEEEEEC--
T ss_pred ceeeeeEecccCC----c-eEEEEECCCCCEEEEEecCCeEEEEEECCcccce-eeeEeecc--c---CCCeEEEEEc--
Confidence 221111111100 0 001122368888888875 47788887764 21 11122210 0 1111111111
Q ss_pred CCCCCCcccEEEEecCCCCCcccccCCCcccccCCceEEEEeeCC-------CCce-------eee-ccCCCceeceeEE
Q 039705 261 DPNSNAIRAEVLICGGAKPEAGVLAGKGEFMNALQDCGRIEITNK-------SATW-------QRE-MMPSPRVMGEMLL 325 (539)
Q Consensus 261 ~~~~~~~~g~Iyv~GG~~~~~~~~~~~~~~~~a~~s~~~~d~~~~-------~~~W-------~~~-~M~~~R~~~~~vv 325 (539)
.+++++++|+.+. .+..+|+... ...| +.. .+.....-.+...
T Consensus 156 ------~~~~~l~~~~~d~----------------~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 213 (377)
T 3dwl_C 156 ------PNNVLLAAGCADR----------------KAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEYPSGGWVHAVGF 213 (377)
T ss_dssp ------TTSSEEEEEESSS----------------CEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECCCCSSSEEEEEE
T ss_pred ------CCCCEEEEEeCCC----------------EEEEEEEEecccCCCccccccccccchhhhhhcccCCceEEEEEE
Confidence 1677888887651 2455665310 0111 111 2211111223345
Q ss_pred ecCCcEEEEcCcCCCCCCcccCCCCCCccEEEcCCCCCCCce--EecCCCCCCccceeeEeeCCCCeEEEecCCC
Q 039705 326 LPTGDVLIINGAKKGTAGWNFATDPNTTPVLYEPDDPINERF--SELTPTSKPRMCHSTSVVLPDGKILVAGSNP 398 (539)
Q Consensus 326 lpdG~I~vvGG~~~g~~g~~~~~~~~~~~e~YdP~t~~g~~W--t~~a~~~~~R~yhs~a~llpdG~V~v~GG~~ 398 (539)
.|||+.+++|+.+ + ++.+||..+. +- ..+..+......-....+.|||+++++|+..
T Consensus 214 sp~~~~l~~~~~d-~------------~i~iwd~~~~---~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~ 272 (377)
T 3dwl_C 214 SPSGNALAYAGHD-S------------SVTIAYPSAP---EQPPRALITVKLSQLPLRSLLWANESAIVAAGYNY 272 (377)
T ss_dssp CTTSSCEEEEETT-T------------EEC-CEECST---TSCEEECCCEECSSSCEEEEEEEETTEEEEEESSS
T ss_pred CCCCCEEEEEeCC-C------------cEEEEECCCC---CCcceeeEeecCCCCceEEEEEcCCCCEEEEEcCC
Confidence 6899999988765 2 5678988876 32 1122211111111234456899999998753
No 52
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=97.32 E-value=0.0091 Score=59.91 Aligned_cols=189 Identities=14% Similarity=0.141 Sum_probs=101.8
Q ss_pred cccceecCCCcEEEecCCCCCCCeEEEEeCCCCccceeeccccccc--ccccceeEEccCCcEEEEcCccCCeEEEE-ec
Q 039705 103 SSSGGLSANGTIVISGGWSSRGRSVRYLSGCYHACYWKEHHWELSA--KRWFSTQHILPDGSFIVVGGRREFSYEYI-LK 179 (539)
Q Consensus 103 c~~~~~l~dG~l~v~GG~~~g~~~v~~ydP~~~t~~W~~~~~~m~~--~R~y~s~~~L~dG~VyvvGG~~~~~~E~y-P~ 179 (539)
|..-+..+||+++++||.+ ..+++||.. +.+|..... +.. ...-.+.+.-+||+.++.|+.+. ++.+| ..
T Consensus 19 v~~l~~sp~g~~las~~~D---~~i~iw~~~--~~~~~~~~~-~~~~h~~~v~~~~~sp~g~~l~s~s~D~-~v~iw~~~ 91 (345)
T 3fm0_A 19 CWFLAWNPAGTLLASCGGD---RRIRIWGTE--GDSWICKSV-LSEGHQRTVRKVAWSPCGNYLASASFDA-TTCIWKKN 91 (345)
T ss_dssp EEEEEECTTSSCEEEEETT---SCEEEEEEE--TTEEEEEEE-ECSSCSSCEEEEEECTTSSEEEEEETTS-CEEEEEEC
T ss_pred EEEEEECCCCCEEEEEcCC---CeEEEEEcC--CCcceeeee-eccccCCcEEEEEECCCCCEEEEEECCC-cEEEEEcc
Confidence 3344566899999999863 678999987 666653221 211 12223344556899999888764 45566 44
Q ss_pred CCCcceeeccCccccCCCCCCCCcceEEEeeCCcEEEEEcC--ceeEeeCCCCeEEEEcccCCCCCCccCCCccEEeccc
Q 039705 180 EGKRIIYDLPILNETTNPSENNLYPFVFLSTDGNLFIFAND--RSILLNPETNEILHVFPILRGGSRNYPASATSALLPI 257 (539)
Q Consensus 180 ~~~~~w~~~~~l~~~~~~~~~~~yp~~~~~~~G~Iyv~Gg~--~~e~yDp~tn~W~~~~p~mp~~~r~yp~~g~av~lpl 257 (539)
.+ .+.....+....+ . --.+...++|++++.|+. .+.+||..+..-...+..+.. .... .-..+..|
T Consensus 92 ~~--~~~~~~~~~~h~~----~-v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~-h~~~--v~~~~~~p- 160 (345)
T 3fm0_A 92 QD--DFECVTTLEGHEN----E-VKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNS-HTQD--VKHVVWHP- 160 (345)
T ss_dssp CC---EEEEEEECCCSS----C-EEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECC-CCSC--EEEEEECS-
T ss_pred CC--CeEEEEEccCCCC----C-ceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecC-cCCC--eEEEEECC-
Confidence 33 3321111111111 0 001233468999999875 477888876432112222222 1110 01112211
Q ss_pred ccCCCCCCCcccEEEEecCCCCCcccccCCCcccccCCceEEEEeeCCCCceeee-ccC--CCceeceeEEecCCcEEEE
Q 039705 258 KLQDPNSNAIRAEVLICGGAKPEAGVLAGKGEFMNALQDCGRIEITNKSATWQRE-MMP--SPRVMGEMLLLPTGDVLII 334 (539)
Q Consensus 258 ~~~~~~~~~~~g~Iyv~GG~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~-~M~--~~R~~~~~vvlpdG~I~vv 334 (539)
+++++++|+.+. .+..+|.. ...|... .+. ..... +...-|||+.++.
T Consensus 161 ----------~~~~l~s~s~d~----------------~i~~w~~~--~~~~~~~~~~~~h~~~v~-~l~~sp~g~~l~s 211 (345)
T 3fm0_A 161 ----------SQELLASASYDD----------------TVKLYREE--EDDWVCCATLEGHESTVW-SLAFDPSGQRLAS 211 (345)
T ss_dssp ----------SSSCEEEEETTS----------------CEEEEEEE--TTEEEEEEEECCCSSCEE-EEEECTTSSEEEE
T ss_pred ----------CCCEEEEEeCCC----------------cEEEEEec--CCCEEEEEEecCCCCceE-EEEECCCCCEEEE
Confidence 677888887651 35567765 3566543 332 22222 3345689999999
Q ss_pred cCcC
Q 039705 335 NGAK 338 (539)
Q Consensus 335 GG~~ 338 (539)
|+.+
T Consensus 212 ~s~D 215 (345)
T 3fm0_A 212 CSDD 215 (345)
T ss_dssp EETT
T ss_pred EeCC
Confidence 9876
No 53
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=97.31 E-value=0.0063 Score=68.36 Aligned_cols=243 Identities=12% Similarity=0.065 Sum_probs=123.7
Q ss_pred cCCCcEEEecCCCCCCCeEEEEeCCCCccceeecccccccccccce-eEEccC--CcEEEEcCccCCeEEEE-ecCCCcc
Q 039705 109 SANGTIVISGGWSSRGRSVRYLSGCYHACYWKEHHWELSAKRWFST-QHILPD--GSFIVVGGRREFSYEYI-LKEGKRI 184 (539)
Q Consensus 109 l~dG~l~v~GG~~~g~~~v~~ydP~~~t~~W~~~~~~m~~~R~y~s-~~~L~d--G~VyvvGG~~~~~~E~y-P~~~~~~ 184 (539)
.+||+.+++||.+ ..+.+||.. ..++..... +...+..-. .+..++ |+.+++|+.++ ++.+| ..++ +
T Consensus 18 s~dg~~latg~~d---g~I~vwd~~--~~~~~~~~~-l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg-~I~vwd~~~~--~ 88 (753)
T 3jro_A 18 DYYGKRLATCSSD---KTIKIFEVE--GETHKLIDT-LTGHEGPVWRVDWAHPKFGTILASCSYDG-KVLIWKEENG--R 88 (753)
T ss_dssp CSSSCCEEEEETT---TEEEEEEEE--TTEEEEEEE-ECCCSSCEEEEEECCTTSCSEEEEEETTS-CEEEEEEETT--E
T ss_pred CCCCCeEEEEECC---CcEEEEecC--CCCCcccee-ccCCcCceEEEEecCCCCCCEEEEEeCCC-eEEEEECCCC--c
Confidence 4678888888763 578999876 556655443 432222222 233345 88889888764 46677 5544 4
Q ss_pred eeeccCccccCCCCCCCCcceEEEeeC--CcEEEEEcCc--eeEeeCCCCeEEEEcccCCCCCCccCCCccEEecccc--
Q 039705 185 IYDLPILNETTNPSENNLYPFVFLSTD--GNLFIFANDR--SILLNPETNEILHVFPILRGGSRNYPASATSALLPIK-- 258 (539)
Q Consensus 185 w~~~~~l~~~~~~~~~~~yp~~~~~~~--G~Iyv~Gg~~--~e~yDp~tn~W~~~~p~mp~~~r~yp~~g~av~lpl~-- 258 (539)
+.....+....+ ... .+...++ |+++++|+.+ +.+||..++.-. ..-.+.. .... .-.....|..
T Consensus 89 ~~~~~~~~~h~~----~V~-~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~-~~~~~~~-~~~~--v~~l~~~p~~~~ 159 (753)
T 3jro_A 89 WSQIAVHAVHSA----SVN-SVQWAPHEYGPLLLVASSDGKVSVVEFKENGTT-SPIIIDA-HAIG--VNSASWAPATIE 159 (753)
T ss_dssp EEEEEEECCCSS----CEE-EEEECCGGGCSEEEEEETTSEEEEEECCSSSCC-CCEEEEC-CSSC--EEEEEECCCC--
T ss_pred ccccccccCCCC----CeE-EEEECCCCCCCEEEEEeCCCcEEEEEeecCCCc-ceeEeec-CCCc--eEEEEecCcccc
Confidence 432211111111 000 1233466 8899998864 678898776311 0000111 0000 0011111100
Q ss_pred cCCCCCCCcccEEEEecCCCCCcccccCCCcccccCCceEEEEeeCCCCceeee-ccC--CCceeceeEEecC---CcEE
Q 039705 259 LQDPNSNAIRAEVLICGGAKPEAGVLAGKGEFMNALQDCGRIEITNKSATWQRE-MMP--SPRVMGEMLLLPT---GDVL 332 (539)
Q Consensus 259 ~~~~~~~~~~g~Iyv~GG~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~-~M~--~~R~~~~~vvlpd---G~I~ 332 (539)
+........+++++++|+.+. .+..+|+......+... .+. .... .+....|+ |+++
T Consensus 160 ~~~~~~~~~d~~~l~sgs~dg----------------~I~iwd~~~~~~~~~~~~~~~~h~~~V-~~l~~sp~~~~~~~l 222 (753)
T 3jro_A 160 EDGEHNGTKESRKFVTGGADN----------------LVKIWKYNSDAQTYVLESTLEGHSDWV-RDVAWSPTVLLRSYL 222 (753)
T ss_dssp -------CGGGCCEEEEETTS----------------CEEEEEEETTTTEEEEEEEECCCSSCE-EEEEECCCCSSSEEE
T ss_pred cccccccCCCCCEEEEEECCC----------------eEEEEeccCCcccceeeeeecCCCCcE-EEEEeccCCCCCCEE
Confidence 000000001467788887651 36678887544555543 332 2223 23345688 8999
Q ss_pred EEcCcCCCCCCcccCCCCCCccEEEcCCCCCCCceEecCCCCCCccceeeEeeCCCCeEEEecCCCC
Q 039705 333 IINGAKKGTAGWNFATDPNTTPVLYEPDDPINERFSELTPTSKPRMCHSTSVVLPDGKILVAGSNPH 399 (539)
Q Consensus 333 vvGG~~~g~~g~~~~~~~~~~~e~YdP~t~~g~~Wt~~a~~~~~R~yhs~a~llpdG~V~v~GG~~~ 399 (539)
++||.+ | ++.+||..+..+..-..+.........-....+.|||+.+++||.+.
T Consensus 223 ~s~s~D-g------------~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~Dg 276 (753)
T 3jro_A 223 ASVSQD-R------------TCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDN 276 (753)
T ss_dssp EEEESS-S------------CEEEEEESSSSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEECSSS
T ss_pred EEEecC-C------------EEEEecCCCCCCcceeEEeccCCCCCceEEEEEcCCCCEEEEEcCCC
Confidence 999876 2 57899998762211111111111111112345679999999998644
No 54
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=97.31 E-value=0.043 Score=55.22 Aligned_cols=227 Identities=15% Similarity=0.173 Sum_probs=121.1
Q ss_pred ecCCCcEEEecCCCCCCCeEEEEeCCCCccceeecccccccccccceeEEccCCcEEEEcCccCCeEEEEecC-C-Ccce
Q 039705 108 LSANGTIVISGGWSSRGRSVRYLSGCYHACYWKEHHWELSAKRWFSTQHILPDGSFIVVGGRREFSYEYILKE-G-KRII 185 (539)
Q Consensus 108 ~l~dG~l~v~GG~~~g~~~v~~ydP~~~t~~W~~~~~~m~~~R~y~s~~~L~dG~VyvvGG~~~~~~E~yP~~-~-~~~w 185 (539)
..+||+.+++||.+ ..+++||.. +......-. . ...+-.+++.-++|+.++.||.++ .+.+|... + ....
T Consensus 72 ~s~d~~~l~s~s~D---g~v~vWd~~--~~~~~~~~~-~-~~~~v~~~~~sp~g~~lasg~~d~-~i~v~~~~~~~~~~~ 143 (354)
T 2pbi_B 72 WCKDKRRIVSSSQD---GKVIVWDSF--TTNKEHAVT-M-PCTWVMACAYAPSGCAIACGGLDN-KCSVYPLTFDKNENM 143 (354)
T ss_dssp ECTTSSEEEEEETT---SEEEEEETT--TCCEEEEEE-C-SSSCCCEEEECTTSSEEEEESTTS-EEEEEECCCCTTCCS
T ss_pred ECCCCCEEEEEeCC---CeEEEEECC--CCCcceEEe-c-CCCCEEEEEECCCCCEEEEeeCCC-CEEEEEEeccccccc
Confidence 45789999999863 689999976 443322111 1 123445666778999999999874 45566221 1 0000
Q ss_pred -eeccCccccCCCCCCCCcceEEEeeCCcEEEEEcC--ceeEeeCCCCeEEEEcccCCCCCCccCCCccEEecccccCCC
Q 039705 186 -YDLPILNETTNPSENNLYPFVFLSTDGNLFIFAND--RSILLNPETNEILHVFPILRGGSRNYPASATSALLPIKLQDP 262 (539)
Q Consensus 186 -~~~~~l~~~~~~~~~~~yp~~~~~~~G~Iyv~Gg~--~~e~yDp~tn~W~~~~p~mp~~~r~yp~~g~av~lpl~~~~~ 262 (539)
.....+..... . --.+...++++.++.|+. .+.+||..+++..+.+ .+ .. .....+.+.+
T Consensus 144 ~~~~~~~~~h~~----~-v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~---~~-h~-----~~v~~~~~~~--- 206 (354)
T 2pbi_B 144 AAKKKSVAMHTN----Y-LSACSFTNSDMQILTASGDGTCALWDVESGQLLQSF---HG-HG-----ADVLCLDLAP--- 206 (354)
T ss_dssp GGGCEEEEECSS----C-EEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEE---EC-CS-----SCEEEEEECC---
T ss_pred cccceeeeccCC----c-EEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEE---cC-CC-----CCeEEEEEEe---
Confidence 00000111000 0 011223457777777664 4788999988755333 22 10 1111111111
Q ss_pred CCCCcccEEEEecCCCCCcccccCCCcccccCCceEEEEeeCCCCceeee-ccCCCceeceeEEecCCcEEEEcCcCCCC
Q 039705 263 NSNAIRAEVLICGGAKPEAGVLAGKGEFMNALQDCGRIEITNKSATWQRE-MMPSPRVMGEMLLLPTGDVLIINGAKKGT 341 (539)
Q Consensus 263 ~~~~~~g~Iyv~GG~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~-~M~~~R~~~~~vvlpdG~I~vvGG~~~g~ 341 (539)
. .+++.+++|+.+. .+..+|+.. .+.... ........ +....|+|+.+++|+.+ +
T Consensus 207 ~---~~g~~l~sgs~Dg----------------~v~~wd~~~--~~~~~~~~~h~~~v~-~v~~~p~~~~l~s~s~D-~- 262 (354)
T 2pbi_B 207 S---ETGNTFVSGGCDK----------------KAMVWDMRS--GQCVQAFETHESDVN-SVRYYPSGDAFASGSDD-A- 262 (354)
T ss_dssp C---SSCCEEEEEETTS----------------CEEEEETTT--CCEEEEECCCSSCEE-EEEECTTSSEEEEEETT-S-
T ss_pred C---CCCCEEEEEeCCC----------------eEEEEECCC--CcEEEEecCCCCCeE-EEEEeCCCCEEEEEeCC-C-
Confidence 0 1467888888652 355677642 222222 22222232 33456899999999876 2
Q ss_pred CCcccCCCCCCccEEEcCCCCCCCceE-ecCCCCCCccceeeEeeCCCCeEEEecCCC
Q 039705 342 AGWNFATDPNTTPVLYEPDDPINERFS-ELTPTSKPRMCHSTSVVLPDGKILVAGSNP 398 (539)
Q Consensus 342 ~g~~~~~~~~~~~e~YdP~t~~g~~Wt-~~a~~~~~R~yhs~a~llpdG~V~v~GG~~ 398 (539)
++.+||..++ +-. ...... .........+.|||+.+++|+.+
T Consensus 263 -----------~v~lwd~~~~---~~~~~~~~~~-~~~~~~~~~~s~~g~~l~~g~~d 305 (354)
T 2pbi_B 263 -----------TCRLYDLRAD---REVAIYSKES-IIFGASSVDFSLSGRLLFAGYND 305 (354)
T ss_dssp -----------CEEEEETTTT---EEEEEECCTT-CCSCEEEEEECTTSSEEEEEETT
T ss_pred -----------eEEEEECCCC---cEEEEEcCCC-cccceeEEEEeCCCCEEEEEECC
Confidence 6789998876 322 222111 11122345567999999999864
No 55
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=97.30 E-value=0.053 Score=52.86 Aligned_cols=222 Identities=14% Similarity=0.204 Sum_probs=117.6
Q ss_pred ecCCCcEEEecCCCCCCCeEEEEeCCCCccceeecccccccc-cccceeEEccCCcEEEEcCccCCeEEEE-ecCCCcce
Q 039705 108 LSANGTIVISGGWSSRGRSVRYLSGCYHACYWKEHHWELSAK-RWFSTQHILPDGSFIVVGGRREFSYEYI-LKEGKRII 185 (539)
Q Consensus 108 ~l~dG~l~v~GG~~~g~~~v~~ydP~~~t~~W~~~~~~m~~~-R~y~s~~~L~dG~VyvvGG~~~~~~E~y-P~~~~~~w 185 (539)
..++|+.+++|+.. ..+++||.. +.+.... +... ..-.+.+..+||+.++.|+.+ ..+.+| ..+. +-
T Consensus 31 ~s~~~~~l~s~~~d---g~i~iw~~~--~~~~~~~---~~~h~~~v~~~~~~~~~~~l~s~~~d-~~i~vwd~~~~--~~ 99 (312)
T 4ery_A 31 FSPNGEWLASSSAD---KLIKIWGAY--DGKFEKT---ISGHKLGISDVAWSSDSNLLVSASDD-KTLKIWDVSSG--KC 99 (312)
T ss_dssp ECTTSSEEEEEETT---SCEEEEETT--TCCEEEE---ECCCSSCEEEEEECTTSSEEEEEETT-SEEEEEETTTC--CE
T ss_pred ECCCCCEEEEeeCC---CeEEEEeCC--Ccccchh---hccCCCceEEEEEcCCCCEEEEECCC-CEEEEEECCCC--cE
Confidence 45688999998753 568899987 5544321 2211 112234456689999988876 356677 4432 21
Q ss_pred eeccCccccCCCCCCCCcceEEEeeCCcEEEEEcC--ceeEeeCCCCeEEEEcccCCCCCCccCCCccEEecccccCCCC
Q 039705 186 YDLPILNETTNPSENNLYPFVFLSTDGNLFIFAND--RSILLNPETNEILHVFPILRGGSRNYPASATSALLPIKLQDPN 263 (539)
Q Consensus 186 ~~~~~l~~~~~~~~~~~yp~~~~~~~G~Iyv~Gg~--~~e~yDp~tn~W~~~~p~mp~~~r~yp~~g~av~lpl~~~~~~ 263 (539)
. ..+..... . --.+...+++++++.|+. .+.+||.++++-.+.+ +. ... + -.++.+ .
T Consensus 100 ~--~~~~~~~~----~-v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~---~~-~~~-~--v~~~~~--~----- 158 (312)
T 4ery_A 100 L--KTLKGHSN----Y-VFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTL---PA-HSD-P--VSAVHF--N----- 158 (312)
T ss_dssp E--EEEECCSS----C-EEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEE---CC-CSS-C--EEEEEE--C-----
T ss_pred E--EEEcCCCC----C-EEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEe---cC-CCC-c--EEEEEE--c-----
Confidence 1 00111100 0 001233468888888875 4788999887654333 21 111 0 011111 1
Q ss_pred CCCcccEEEEecCCCCCcccccCCCcccccCCceEEEEeeCCCCceeee--ccCCCceeceeEEecCCcEEEEcCcCCCC
Q 039705 264 SNAIRAEVLICGGAKPEAGVLAGKGEFMNALQDCGRIEITNKSATWQRE--MMPSPRVMGEMLLLPTGDVLIINGAKKGT 341 (539)
Q Consensus 264 ~~~~~g~Iyv~GG~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~--~M~~~R~~~~~vvlpdG~I~vvGG~~~g~ 341 (539)
.+++++++|+.+. .+..+|+.. .+-... .-..... .....-|+|+.+++|+.+ +
T Consensus 159 ---~~~~~l~~~~~d~----------------~i~~wd~~~--~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~d-~- 214 (312)
T 4ery_A 159 ---RDGSLIVSSSYDG----------------LCRIWDTAS--GQCLKTLIDDDNPPV-SFVKFSPNGKYILAATLD-N- 214 (312)
T ss_dssp ---TTSSEEEEEETTS----------------CEEEEETTT--CCEEEEECCSSCCCE-EEEEECTTSSEEEEEETT-T-
T ss_pred ---CCCCEEEEEeCCC----------------cEEEEECCC--CceeeEEeccCCCce-EEEEECCCCCEEEEEcCC-C-
Confidence 1677888887651 355677642 221111 1111112 223456899999988765 2
Q ss_pred CCcccCCCCCCccEEEcCCCCCCCceE-ecCCCCCCccceeeEeeCCCCeEEEecCCCC
Q 039705 342 AGWNFATDPNTTPVLYEPDDPINERFS-ELTPTSKPRMCHSTSVVLPDGKILVAGSNPH 399 (539)
Q Consensus 342 ~g~~~~~~~~~~~e~YdP~t~~g~~Wt-~~a~~~~~R~yhs~a~llpdG~V~v~GG~~~ 399 (539)
.+.+||..+. +-. ..................++++.+++|+.++
T Consensus 215 -----------~i~iwd~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg 259 (312)
T 4ery_A 215 -----------TLKLWDYSKG---KCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDN 259 (312)
T ss_dssp -----------EEEEEETTTT---EEEEEECSSCCSSSCCCEEEECSSSCEEEECCTTS
T ss_pred -----------eEEEEECCCC---cEEEEEEecCCceEEEEEEEEeCCCcEEEEECCCC
Confidence 5789998876 422 2221111111112233347899999998644
No 56
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=97.29 E-value=0.066 Score=54.29 Aligned_cols=233 Identities=13% Similarity=0.156 Sum_probs=118.8
Q ss_pred eecCCCcEEEecCCCCCCCeEEEEeCCCCccceeecccccc-cccccceeEEccCCcEEEEcCccCCeEEEE-ecCC---
Q 039705 107 GLSANGTIVISGGWSSRGRSVRYLSGCYHACYWKEHHWELS-AKRWFSTQHILPDGSFIVVGGRREFSYEYI-LKEG--- 181 (539)
Q Consensus 107 ~~l~dG~l~v~GG~~~g~~~v~~ydP~~~t~~W~~~~~~m~-~~R~y~s~~~L~dG~VyvvGG~~~~~~E~y-P~~~--- 181 (539)
...+||+++++|+.+ ..+++||.. +.+-... +. ...+-.+++.-+||+.++.||.+. .+.+| ....
T Consensus 73 ~~sp~~~~l~s~s~D---~~v~iWd~~--~~~~~~~---~~~h~~~v~~~~~s~~g~~las~~~d~-~v~iw~~~~~~~~ 143 (380)
T 3iz6_a 73 DWTPEKNWIVSASQD---GRLIVWNAL--TSQKTHA---IKLHCPWVMECAFAPNGQSVACGGLDS-ACSIFNLSSQADR 143 (380)
T ss_dssp EECTTSSCEEEEETT---SEEEEEETT--TTEEEEE---EECCCTTCCCCEECTTSSEEEECCSSS-CCEEEECCCCSSC
T ss_pred EEcCCCCEEEEEeCC---CeEEEEECC--CCccceE---EecCCCCEEEEEECCCCCEEEEeeCCC-cEEEEECCCCccc
Confidence 445789999999863 689999987 4432221 21 123334556677999999999874 34555 2221
Q ss_pred CcceeeccCccccCCCCCCCCcceEEEeeC-CcEEEEEcC--ceeEeeCCCCeEEEEcc-cCCCCCCccCCCccEEeccc
Q 039705 182 KRIIYDLPILNETTNPSENNLYPFVFLSTD-GNLFIFAND--RSILLNPETNEILHVFP-ILRGGSRNYPASATSALLPI 257 (539)
Q Consensus 182 ~~~w~~~~~l~~~~~~~~~~~yp~~~~~~~-G~Iyv~Gg~--~~e~yDp~tn~W~~~~p-~mp~~~r~yp~~g~av~lpl 257 (539)
.........+....+. .. .+...++ +..++.|+. .+.+||..+++-...+. ..+.+. ......+..
T Consensus 144 ~~~~~~~~~~~gh~~~----v~-~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h-----~~~v~~~~~ 213 (380)
T 3iz6_a 144 DGNMPVSRVLTGHKGY----AS-SCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGH-----TADVLSLSI 213 (380)
T ss_dssp CCSSTTCCBCCCCSSC----CC-CCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSC-----CSCEEEEEE
T ss_pred cCCccceeeccCCCcc----eE-EEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCC-----ccCeEEEEe
Confidence 0001001111111110 00 0111233 455566654 47889999887543221 111110 111111111
Q ss_pred ccCCCCCCCcccEEEEecCCCCCcccccCCCcccccCCceEEEEeeCCCCceeeeccCCCceeceeEEecCCcEEEEcCc
Q 039705 258 KLQDPNSNAIRAEVLICGGAKPEAGVLAGKGEFMNALQDCGRIEITNKSATWQREMMPSPRVMGEMLLLPTGDVLIINGA 337 (539)
Q Consensus 258 ~~~~~~~~~~~g~Iyv~GG~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~~M~~~R~~~~~vvlpdG~I~vvGG~ 337 (539)
.+ .++.+++.|+.+. .+..+|+......-....-...... +....|||+.++.|+.
T Consensus 214 ~~-------~~~~~l~sgs~D~----------------~v~~wd~~~~~~~~~~~~~h~~~v~-~v~~~p~~~~l~s~s~ 269 (380)
T 3iz6_a 214 NS-------LNANMFISGSCDT----------------TVRLWDLRITSRAVRTYHGHEGDIN-SVKFFPDGQRFGTGSD 269 (380)
T ss_dssp CS-------SSCCEEEEEETTS----------------CEEEEETTTTCCCCEEECCCSSCCC-EEEECTTSSEEEEECS
T ss_pred ec-------CCCCEEEEEECCC----------------eEEEEECCCCCcceEEECCcCCCeE-EEEEecCCCeEEEEcC
Confidence 11 2678889988762 3556776421111111111222222 3345789999999987
Q ss_pred CCCCCCcccCCCCCCccEEEcCCCCCCCceE-ecCCCCC----CccceeeEeeCCCCeEEEecCCC
Q 039705 338 KKGTAGWNFATDPNTTPVLYEPDDPINERFS-ELTPTSK----PRMCHSTSVVLPDGKILVAGSNP 398 (539)
Q Consensus 338 ~~g~~g~~~~~~~~~~~e~YdP~t~~g~~Wt-~~a~~~~----~R~yhs~a~llpdG~V~v~GG~~ 398 (539)
+ + ++.+||..+. +-. ....... ....-....+.|||+.+++|+.+
T Consensus 270 D-~------------~i~lwd~~~~---~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d 319 (380)
T 3iz6_a 270 D-G------------TCRLFDMRTG---HQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSN 319 (380)
T ss_dssp S-S------------CEEEEETTTT---EEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTT
T ss_pred C-C------------eEEEEECCCC---cEEEEecccccccccccCceEEEEECCCCCEEEEEECC
Confidence 6 2 6789999876 322 2211110 00111234567999999999864
No 57
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=97.29 E-value=0.079 Score=50.93 Aligned_cols=218 Identities=12% Similarity=0.196 Sum_probs=109.6
Q ss_pred cCCCcEEEecCCCCCCCeEEEEeCCCCccceeeccccc--ccccccceeEEc--cCCcEEEEcCccCCeEEEEecCCCcc
Q 039705 109 SANGTIVISGGWSSRGRSVRYLSGCYHACYWKEHHWEL--SAKRWFSTQHIL--PDGSFIVVGGRREFSYEYILKEGKRI 184 (539)
Q Consensus 109 l~dG~l~v~GG~~~g~~~v~~ydP~~~t~~W~~~~~~m--~~~R~y~s~~~L--~dG~VyvvGG~~~~~~E~yP~~~~~~ 184 (539)
..+|++|++... ...+.+||+. ..........- ...-..+...++ .+|++||.+......+.+|..+. +
T Consensus 38 ~~~g~l~v~~~~---~~~i~~~d~~--g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~d~~g--~ 110 (286)
T 1q7f_A 38 NAQNDIIVADTN---NHRIQIFDKE--GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYNQYG--Q 110 (286)
T ss_dssp CTTCCEEEEEGG---GTEEEEECTT--SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEECTTS--C
T ss_pred CCCCCEEEEECC---CCEEEEECCC--CcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEEEECCCC--c
Confidence 457898888543 2578899987 33222221100 001123334444 57899998754234556663222 2
Q ss_pred e-eeccCccccCCCCCCCCcceEEE-eeCCcEEEEEc--CceeEeeCCCCeEEEEcccCCCCCCccCCCccEEecccccC
Q 039705 185 I-YDLPILNETTNPSENNLYPFVFL-STDGNLFIFAN--DRSILLNPETNEILHVFPILRGGSRNYPASATSALLPIKLQ 260 (539)
Q Consensus 185 w-~~~~~l~~~~~~~~~~~yp~~~~-~~~G~Iyv~Gg--~~~e~yDp~tn~W~~~~p~mp~~~r~yp~~g~av~lpl~~~ 260 (539)
. ..... . ....|...+ .++|+||+... ..+.+||+...... .+.. +. ....| ..+.+ .
T Consensus 111 ~~~~~~~--~------~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~~~-~~~~-~~-~~~~p---~~i~~--~-- 172 (286)
T 1q7f_A 111 FVRKFGA--T------ILQHPRGVTVDNKGRIIVVECKVMRVIIFDQNGNVLH-KFGC-SK-HLEFP---NGVVV--N-- 172 (286)
T ss_dssp EEEEECT--T------TCSCEEEEEECTTSCEEEEETTTTEEEEECTTSCEEE-EEEC-TT-TCSSE---EEEEE--C--
T ss_pred EEEEecC--c------cCCCceEEEEeCCCCEEEEECCCCEEEEEcCCCCEEE-EeCC-CC-ccCCc---EEEEE--C--
Confidence 2 11111 0 011344443 46899999864 45788998765443 3321 11 11111 12221 1
Q ss_pred CCCCCCcccEEEEecCCCCCcccccCCCcccccCCceEEEEeeCCCCc-eeee-c--cCCCceeceeEEecCCcEEEEcC
Q 039705 261 DPNSNAIRAEVLICGGAKPEAGVLAGKGEFMNALQDCGRIEITNKSAT-WQRE-M--MPSPRVMGEMLLLPTGDVLIING 336 (539)
Q Consensus 261 ~~~~~~~~g~Iyv~GG~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~-W~~~-~--M~~~R~~~~~vvlpdG~I~vvGG 336 (539)
.+++||+....+ ..+.+||+. ... ++.. . +..++ +.++-+||+|||...
T Consensus 173 ------~~g~l~v~~~~~----------------~~i~~~~~~--g~~~~~~~~~g~~~~p~---~i~~d~~G~l~v~~~ 225 (286)
T 1q7f_A 173 ------DKQEIFISDNRA----------------HCVKVFNYE--GQYLRQIGGEGITNYPI---GVGINSNGEILIADN 225 (286)
T ss_dssp ------SSSEEEEEEGGG----------------TEEEEEETT--CCEEEEESCTTTSCSEE---EEEECTTCCEEEEEC
T ss_pred ------CCCCEEEEECCC----------------CEEEEEcCC--CCEEEEEccCCccCCCc---EEEECCCCCEEEEeC
Confidence 268899875422 246677753 121 1111 1 22222 334458999999875
Q ss_pred cCCCCCCcccCCCCCCccEEEcCCCCCCCceEecCC-CCCCccceeeEeeCCCCeEEEec
Q 039705 337 AKKGTAGWNFATDPNTTPVLYEPDDPINERFSELTP-TSKPRMCHSTSVVLPDGKILVAG 395 (539)
Q Consensus 337 ~~~g~~g~~~~~~~~~~~e~YdP~t~~g~~Wt~~a~-~~~~R~yhs~a~llpdG~V~v~G 395 (539)
.+. ..+.+||++.. ....+.. .... .-++. .+.+||++||+.
T Consensus 226 ~~~------------~~i~~~~~~g~---~~~~~~~~~~~~-~~~~i-~~~~~g~l~vs~ 268 (286)
T 1q7f_A 226 HNN------------FNLTIFTQDGQ---LISALESKVKHA-QCFDV-ALMDDGSVVLAS 268 (286)
T ss_dssp SSS------------CEEEEECTTSC---EEEEEEESSCCS-CEEEE-EEETTTEEEEEE
T ss_pred CCC------------EEEEEECCCCC---EEEEEcccCCCC-cceeE-EECCCCcEEEEC
Confidence 431 15789998654 3333321 1111 12233 456899999984
No 58
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=97.26 E-value=0.025 Score=57.43 Aligned_cols=261 Identities=11% Similarity=0.040 Sum_probs=126.7
Q ss_pred eEEEEECCCCCEEeCccCCCcccccceecCCCcEEEecCCCCCCCeEEEEeCCCCccceeecccccc-cccccceeEEcc
Q 039705 81 LAVEYDAESAAIRPLKILTDTWSSSGGLSANGTIVISGGWSSRGRSVRYLSGCYHACYWKEHHWELS-AKRWFSTQHILP 159 (539)
Q Consensus 81 ~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydP~~~t~~W~~~~~~m~-~~R~y~s~~~L~ 159 (539)
...+||..+.+.......+ .........++|+++++|+.. ..+++||.. +.+-... +. ....-.+.+..+
T Consensus 79 ~v~i~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~d---g~i~iwd~~--~~~~~~~---~~~h~~~v~~~~~~~ 149 (420)
T 3vl1_A 79 HDFLFNTIIRDGSKMLKRA-DYTAVDTAKLQMRRFILGTTE---GDIKVLDSN--FNLQREI---DQAHVSEITKLKFFP 149 (420)
T ss_dssp EEEEEECCSEETTTTSCSC-CEEEEEEECSSSCEEEEEETT---SCEEEECTT--SCEEEEE---TTSSSSCEEEEEECT
T ss_pred cEEEEEecccceeeEEecC-CceEEEEEecCCCEEEEEECC---CCEEEEeCC--Ccceeee---cccccCccEEEEECC
Confidence 3556776654322211111 111222345789999999763 578999987 4432221 21 112223445566
Q ss_pred CCcEEEEcCccCCeEEEE-ecCCCcceeeccCccccCCCCCCCCcceEEEeeCCcEEEEEcC--ceeEeeCCCCeEEEEc
Q 039705 160 DGSFIVVGGRREFSYEYI-LKEGKRIIYDLPILNETTNPSENNLYPFVFLSTDGNLFIFAND--RSILLNPETNEILHVF 236 (539)
Q Consensus 160 dG~VyvvGG~~~~~~E~y-P~~~~~~w~~~~~l~~~~~~~~~~~yp~~~~~~~G~Iyv~Gg~--~~e~yDp~tn~W~~~~ 236 (539)
||+.++.|+.+ .++.+| ..+. +-. ..+..... . --.+...++|+.++.|+. .+.+||.++++-.+.+
T Consensus 150 ~~~~l~s~s~d-~~i~iwd~~~~--~~~--~~~~~h~~----~-v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~ 219 (420)
T 3vl1_A 150 SGEALISSSQD-MQLKIWSVKDG--SNP--RTLIGHRA----T-VTDIAIIDRGRNVLSASLDGTIRLWECGTGTTIHTF 219 (420)
T ss_dssp TSSEEEEEETT-SEEEEEETTTC--CCC--EEEECCSS----C-EEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEE
T ss_pred CCCEEEEEeCC-CeEEEEeCCCC--cCc--eEEcCCCC----c-EEEEEEcCCCCEEEEEcCCCcEEEeECCCCceeEEe
Confidence 89988888765 356677 4332 110 00111110 0 001234468998888875 4788999988755333
Q ss_pred ccCCCCCCccCCCccEEeccccc--------C--CCCCCCcccEEEEecCCCCCcccccCCCcccccCCceEEEEeeCCC
Q 039705 237 PILRGGSRNYPASATSALLPIKL--------Q--DPNSNAIRAEVLICGGAKPEAGVLAGKGEFMNALQDCGRIEITNKS 306 (539)
Q Consensus 237 p~mp~~~r~yp~~g~av~lpl~~--------~--~~~~~~~~g~Iyv~GG~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~ 306 (539)
..... .... .....+.+-.. . ..-.-..+++.+++|+.+. .+..+|+....
T Consensus 220 ~~~~~-~~~~--v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg----------------~i~i~d~~~~~ 280 (420)
T 3vl1_A 220 NRKEN-PHDG--VNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSG----------------VITVHNVFSKE 280 (420)
T ss_dssp CBTTB-TTCC--EEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTS----------------CEEEEETTTCC
T ss_pred ecCCC-CCCC--ccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCC----------------eEEEEECCCCc
Confidence 21110 0000 00001100000 0 0000002678888887651 35667764311
Q ss_pred CceeeeccCCCceeceeEEecCCc-EEEEcCcCCCCCCcccCCCCCCccEEEcCCCCCCCceEecCCCCCCccceeeEee
Q 039705 307 ATWQREMMPSPRVMGEMLLLPTGD-VLIINGAKKGTAGWNFATDPNTTPVLYEPDDPINERFSELTPTSKPRMCHSTSVV 385 (539)
Q Consensus 307 ~~W~~~~M~~~R~~~~~vvlpdG~-I~vvGG~~~g~~g~~~~~~~~~~~e~YdP~t~~g~~Wt~~a~~~~~R~yhs~a~l 385 (539)
..... .......-.+....|+|+ ++++|+.+ | .+.+||..+..- ....+.... ...-.++.
T Consensus 281 ~~~~~-~~~~~~~v~~~~~~~~~~~~l~~g~~d-g------------~i~vwd~~~~~~-~~~~~~~~~---~~~v~~~~ 342 (420)
T 3vl1_A 281 QTIQL-PSKFTCSCNSLTVDGNNANYIYAGYEN-G------------MLAQWDLRSPEC-PVGEFLINE---GTPINNVY 342 (420)
T ss_dssp EEEEE-CCTTSSCEEEEEECSSCTTEEEEEETT-S------------EEEEEETTCTTS-CSEEEEEST---TSCEEEEE
T ss_pred eeEEc-ccccCCCceeEEEeCCCCCEEEEEeCC-C------------eEEEEEcCCCcC-chhhhhccC---CCCceEEE
Confidence 11111 111111122345578998 88888765 2 578999987611 012221101 11112334
Q ss_pred CCCCeEEEecCC
Q 039705 386 LPDGKILVAGSN 397 (539)
Q Consensus 386 lpdG~V~v~GG~ 397 (539)
.+||+.+++|+.
T Consensus 343 ~~~~~~l~s~~~ 354 (420)
T 3vl1_A 343 FAAGALFVSSGF 354 (420)
T ss_dssp EETTEEEEEETT
T ss_pred eCCCCEEEEecC
Confidence 579999999885
No 59
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=97.24 E-value=0.057 Score=57.42 Aligned_cols=240 Identities=14% Similarity=0.149 Sum_probs=124.7
Q ss_pred EEEEECCCCCEEeCccCCCcccccceecCCCcEEEecCCCCCCCeEEEEeCCCCccceeeccccccccc-ccceeEEccC
Q 039705 82 AVEYDAESAAIRPLKILTDTWSSSGGLSANGTIVISGGWSSRGRSVRYLSGCYHACYWKEHHWELSAKR-WFSTQHILPD 160 (539)
Q Consensus 82 ~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydP~~~t~~W~~~~~~m~~~R-~y~s~~~L~d 160 (539)
..+||........+.... ......++.+||+.+++|+.. ..+++||.. ...-.. +.... .-.+.+.-+|
T Consensus 327 i~~w~~~~~~~~~~~~~~-~~v~~~~~s~~g~~l~~~~~d---g~v~~~~~~--~~~~~~----~~~~~~~v~~~~~s~d 396 (577)
T 2ymu_A 327 VKLWNRNGQHLQTLTGHS-SSVWGVAFSPDGQTIASASDD---KTVKLWNRN--GQLLQT----LTGHSSSVRGVAFSPD 396 (577)
T ss_dssp EEEEETTSCEEEEECCCS-SCEEEEEECTTSSEEEEEETT---SEEEEEETT--CCEEEE----EECCSSCEEEEEECTT
T ss_pred EEEEeCCCCeeEEEeCCC-CCEEEEEECCCCCEEEEEeCC---CEEEEEcCC--CCEEEE----ecCCCCCeEEEEECCC
Confidence 457887666555443222 222233556899999998753 578899865 322222 22111 1123445568
Q ss_pred CcEEEEcCccCCeEEEEecCCCcceeeccCccccCCCCCCCCcceEEEeeCCcEEEEEcC--ceeEeeCCCCeEEEEccc
Q 039705 161 GSFIVVGGRREFSYEYILKEGKRIIYDLPILNETTNPSENNLYPFVFLSTDGNLFIFAND--RSILLNPETNEILHVFPI 238 (539)
Q Consensus 161 G~VyvvGG~~~~~~E~yP~~~~~~w~~~~~l~~~~~~~~~~~yp~~~~~~~G~Iyv~Gg~--~~e~yDp~tn~W~~~~p~ 238 (539)
|+.+++|+.+ ..+.+|..+. +... .+..... . -......+|++.++.++. .+.+||....... .+
T Consensus 397 g~~l~~~~~d-~~v~~~~~~~--~~~~--~~~~~~~----~-v~~~~~s~d~~~l~~~~~d~~v~~w~~~~~~~~-~~-- 463 (577)
T 2ymu_A 397 GQTIASASDD-KTVKLWNRNG--QLLQ--TLTGHSS----S-VWGVAFSPDDQTIASASDDKTVKLWNRNGQLLQ-TL-- 463 (577)
T ss_dssp SSCEEEEETT-SEEEEECTTC--CEEE--EEECCSS----C-EEEEEECTTSSEEEEEETTSEEEEEETTSCEEE-EE--
T ss_pred CCEEEEEeCC-CEEEEEeCCC--CEEE--EecCCCC----C-eEEEEECCCCCEEEEEcCCCEEEEEECCCCEEE-EE--
Confidence 9998888765 3566663322 2210 0111100 0 012234578998888875 3678886554332 23
Q ss_pred CCCCCCccCCCccEEecccccCCCCCCCcccEEEEecCCCCCcccccCCCcccccCCceEEEEeeCCCCceeee-ccCCC
Q 039705 239 LRGGSRNYPASATSALLPIKLQDPNSNAIRAEVLICGGAKPEAGVLAGKGEFMNALQDCGRIEITNKSATWQRE-MMPSP 317 (539)
Q Consensus 239 mp~~~r~yp~~g~av~lpl~~~~~~~~~~~g~Iyv~GG~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~-~M~~~ 317 (539)
.. ... + --.... . .+++++++|+.+. .+..+|.. .+-... .-+..
T Consensus 464 -~~-~~~-~-v~~~~~---s--------pd~~~las~~~d~----------------~i~iw~~~---~~~~~~~~~h~~ 509 (577)
T 2ymu_A 464 -TG-HSS-S-VRGVAF---S--------PDGQTIASASDDK----------------TVKLWNRN---GQLLQTLTGHSS 509 (577)
T ss_dssp -EC-CSS-C-EEEEEE---C--------TTSCEEEEEETTS----------------EEEEEETT---SCEEEEEECCSS
T ss_pred -cC-CCC-C-EEEEEE---c--------CCCCEEEEEeCCC----------------EEEEEcCC---CCEEEEEeCCCC
Confidence 21 111 0 001122 1 2788888887651 24445532 221111 22223
Q ss_pred ceeceeEEecCCcEEEEcCcCCCCCCcccCCCCCCccEEEcCCCCCCCceEecCCCCCCccceeeEeeCCCCeEEEecCC
Q 039705 318 RVMGEMLLLPTGDVLIINGAKKGTAGWNFATDPNTTPVLYEPDDPINERFSELTPTSKPRMCHSTSVVLPDGKILVAGSN 397 (539)
Q Consensus 318 R~~~~~vvlpdG~I~vvGG~~~g~~g~~~~~~~~~~~e~YdP~t~~g~~Wt~~a~~~~~R~yhs~a~llpdG~V~v~GG~ 397 (539)
+.. +....|||+.++.++.+ + ++.+||.... ....+... ..+. ....+.|||+.+++||.
T Consensus 510 ~v~-~l~~s~dg~~l~s~~~d-g------------~v~lwd~~~~---~~~~~~~h-~~~v--~~~~fs~dg~~l~s~~~ 569 (577)
T 2ymu_A 510 SVR-GVAFSPDGQTIASASDD-K------------TVKLWNRNGQ---LLQTLTGH-SSSV--WGVAFSPDGQTIASASS 569 (577)
T ss_dssp CEE-EEEECTTSSCEEEEETT-S------------EEEEECTTSC---EEEEEECC-SSCE--EEEEECTTSSCEEEEET
T ss_pred CEE-EEEEcCCCCEEEEEECc-C------------EEEEEeCCCC---EEEEEcCC-CCCE--EEEEEcCCCCEEEEEeC
Confidence 332 23456899999998865 2 5789995433 44443211 1111 12446799999999886
Q ss_pred C
Q 039705 398 P 398 (539)
Q Consensus 398 ~ 398 (539)
+
T Consensus 570 D 570 (577)
T 2ymu_A 570 D 570 (577)
T ss_dssp T
T ss_pred C
Confidence 4
No 60
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=97.20 E-value=0.13 Score=50.83 Aligned_cols=204 Identities=12% Similarity=0.133 Sum_probs=109.0
Q ss_pred eEEEEECCCCCEEeCccCCCcccccceecCCCcEEEecCCCCCCCeEEEEeCCCCccceeeccccccc-ccccceeEEcc
Q 039705 81 LAVEYDAESAAIRPLKILTDTWSSSGGLSANGTIVISGGWSSRGRSVRYLSGCYHACYWKEHHWELSA-KRWFSTQHILP 159 (539)
Q Consensus 81 ~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydP~~~t~~W~~~~~~m~~-~R~y~s~~~L~ 159 (539)
...+||..+++....-..+.......+..+||+.+++|+.. ..+++||.. +.+-.. . +.. ...-.+.+.-+
T Consensus 103 ~i~lWd~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~g~~d---g~v~i~~~~--~~~~~~--~-~~~~~~~v~~~~~sp 174 (321)
T 3ow8_A 103 HIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHV---GKVNIFGVE--SGKKEY--S-LDTRGKFILSIAYSP 174 (321)
T ss_dssp EEEEEETTTTEEEEEEECCTTCCCCEEECTTSSEEEEECTT---SEEEEEETT--TCSEEE--E-EECSSSCEEEEEECT
T ss_pred cEEEEECCCCCEEEEEeCCCccEEEEEECCCCCEEEEEcCC---CcEEEEEcC--CCceeE--E-ecCCCceEEEEEECC
Confidence 46789998776533222222222234566899999999863 578999986 332111 1 221 12223455567
Q ss_pred CCcEEEEcCccCCeEEEE-ecCCCcceeeccCccccCCCCCCCCcceEEEeeCCcEEEEEcCc--eeEeeCCCCeEEEEc
Q 039705 160 DGSFIVVGGRREFSYEYI-LKEGKRIIYDLPILNETTNPSENNLYPFVFLSTDGNLFIFANDR--SILLNPETNEILHVF 236 (539)
Q Consensus 160 dG~VyvvGG~~~~~~E~y-P~~~~~~w~~~~~l~~~~~~~~~~~yp~~~~~~~G~Iyv~Gg~~--~e~yDp~tn~W~~~~ 236 (539)
||+.++.|+.++ .+.+| ..+. +-. ..+..... ... .+...++|++++.|+.+ +.+||..+.+....+
T Consensus 175 dg~~lasg~~dg-~i~iwd~~~~--~~~--~~~~~h~~----~v~-~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~ 244 (321)
T 3ow8_A 175 DGKYLASGAIDG-IINIFDIATG--KLL--HTLEGHAM----PIR-SLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTL 244 (321)
T ss_dssp TSSEEEEEETTS-CEEEEETTTT--EEE--EEECCCSS----CCC-EEEECTTSCEEEEECTTSCEEEEETTTCCEEEEE
T ss_pred CCCEEEEEcCCC-eEEEEECCCC--cEE--EEEcccCC----cee-EEEEcCCCCEEEEEcCCCeEEEEECCCcceeEEE
Confidence 999999988764 56677 4433 221 00111100 001 23345799999999854 788999887654322
Q ss_pred ccCCCCCCccCCCccEEecccccCCCCCCCcccEEEEecCCCCCcccccCCCcccccCCceEEEEeeCCCCceeee-ccC
Q 039705 237 PILRGGSRNYPASATSALLPIKLQDPNSNAIRAEVLICGGAKPEAGVLAGKGEFMNALQDCGRIEITNKSATWQRE-MMP 315 (539)
Q Consensus 237 p~mp~~~r~yp~~g~av~lpl~~~~~~~~~~~g~Iyv~GG~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~-~M~ 315 (539)
.+ .... --....-| +++.++.|+.+. ++..+|+.. .+-... .-.
T Consensus 245 ---~~-h~~~--v~~~~~sp-----------~~~~l~s~s~D~----------------~v~iwd~~~--~~~~~~~~~h 289 (321)
T 3ow8_A 245 ---SG-HASW--VLNVAFCP-----------DDTHFVSSSSDK----------------SVKVWDVGT--RTCVHTFFDH 289 (321)
T ss_dssp ---CC-CSSC--EEEEEECT-----------TSSEEEEEETTS----------------CEEEEETTT--TEEEEEECCC
T ss_pred ---cC-CCCc--eEEEEECC-----------CCCEEEEEeCCC----------------cEEEEeCCC--CEEEEEEcCC
Confidence 22 1110 00112211 677888888651 355666532 111111 112
Q ss_pred CCceeceeEEecCCcEEEEcCcC
Q 039705 316 SPRVMGEMLLLPTGDVLIINGAK 338 (539)
Q Consensus 316 ~~R~~~~~vvlpdG~I~vvGG~~ 338 (539)
..... +....+||+.++.+|.+
T Consensus 290 ~~~v~-~v~~s~~g~~l~s~~~d 311 (321)
T 3ow8_A 290 QDQVW-GVKYNGNGSKIVSVGDD 311 (321)
T ss_dssp SSCEE-EEEECTTSSEEEEEETT
T ss_pred CCcEE-EEEECCCCCEEEEEeCC
Confidence 22222 33456899999988876
No 61
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=97.20 E-value=0.056 Score=54.29 Aligned_cols=133 Identities=7% Similarity=0.007 Sum_probs=72.8
Q ss_pred EEEEECCCCCEEeCccC--CCcccccceecC-CCcEEEecCCCCCCCeEEEEeCCCCccceeecccccccccccceeEEc
Q 039705 82 AVEYDAESAAIRPLKIL--TDTWSSSGGLSA-NGTIVISGGWSSRGRSVRYLSGCYHACYWKEHHWELSAKRWFSTQHIL 158 (539)
Q Consensus 82 ~~~yDp~t~~w~~l~~~--~~~~c~~~~~l~-dG~l~v~GG~~~g~~~v~~ydP~~~t~~W~~~~~~m~~~R~y~s~~~L 158 (539)
..+||..+.+....... +..........+ ++.++++|+.. ..+++||.. +.........-....+-.+.+.-
T Consensus 98 i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d---~~i~iwd~~--~~~~~~~~~~~~~~~~v~~~~~~ 172 (383)
T 3ei3_B 98 IILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIR---GATTLRDFS--GSVIQVFAKTDSWDYWYCCVDVS 172 (383)
T ss_dssp EEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETT---TEEEEEETT--SCEEEEEECCCCSSCCEEEEEEE
T ss_pred EEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCC---CEEEEEECC--CCceEEEeccCCCCCCeEEEEEC
Confidence 66899888776654332 222222234455 67888888753 678999987 54444332101111222345556
Q ss_pred cCCcEEEEcCccCCeEEEEecCCCcceeeccCccccCCCCCCCCcceEEEeeCCc-EEEEEcCc--eeEeeCCC
Q 039705 159 PDGSFIVVGGRREFSYEYILKEGKRIIYDLPILNETTNPSENNLYPFVFLSTDGN-LFIFANDR--SILLNPET 229 (539)
Q Consensus 159 ~dG~VyvvGG~~~~~~E~yP~~~~~~w~~~~~l~~~~~~~~~~~yp~~~~~~~G~-Iyv~Gg~~--~e~yDp~t 229 (539)
+|++.+++|+.+ ..+.+|..+. ....... .... . --.+...++++ +++.|+.+ +.+||..+
T Consensus 173 ~~~~~l~~~~~d-~~i~i~d~~~-~~~~~~~---~h~~----~-v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~ 236 (383)
T 3ei3_B 173 VSRQMLATGDST-GRLLLLGLDG-HEIFKEK---LHKA----K-VTHAEFNPRCDWLMATSSVDATVKLWDLRN 236 (383)
T ss_dssp TTTTEEEEEETT-SEEEEEETTS-CEEEEEE---CSSS----C-EEEEEECSSCTTEEEEEETTSEEEEEEGGG
T ss_pred CCCCEEEEECCC-CCEEEEECCC-CEEEEec---cCCC----c-EEEEEECCCCCCEEEEEeCCCEEEEEeCCC
Confidence 789999888876 3566662222 0111111 1100 0 00123346787 88888754 77899886
No 62
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=97.19 E-value=0.16 Score=47.96 Aligned_cols=133 Identities=14% Similarity=0.095 Sum_probs=66.1
Q ss_pred EEEEECCCCCEEeCccCCCcccccceecCCCcEEEecCCCCCCCeEEEEeCCCCccceeecccccccccccceeEEccCC
Q 039705 82 AVEYDAESAAIRPLKILTDTWSSSGGLSANGTIVISGGWSSRGRSVRYLSGCYHACYWKEHHWELSAKRWFSTQHILPDG 161 (539)
Q Consensus 82 ~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydP~~~t~~W~~~~~~m~~~R~y~s~~~L~dG 161 (539)
..+||+.+...............+-+...+|++|+... ...+.+||+. +....... ......-.+.+.-++|
T Consensus 48 i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~----~~~i~~~d~~--~~~~~~~~--~~~~~~p~~i~~~~~g 119 (270)
T 1rwi_B 48 VVKLATGSTGTTVLPFNGLYQPQGLAVDGAGTVYVTDF----NNRVVTLAAG--SNNQTVLP--FDGLNYPEGLAVDTQG 119 (270)
T ss_dssp EEEECC-----EECCCCSCCSCCCEEECTTCCEEEEET----TTEEEEECTT--CSCCEECC--CCSCSSEEEEEECTTC
T ss_pred EEEecCCCcccceEeeCCcCCcceeEECCCCCEEEEcC----CCEEEEEeCC--CceEeeee--cCCcCCCcceEECCCC
Confidence 44577766555444322211222334456899998865 2578899997 54433322 1111111234445589
Q ss_pred cEEEEcCccCCeEEEE-ecCCCcceeeccCccccCCCCCCCCcceEE-EeeCCcEEEEEc--CceeEeeCCCCeEE
Q 039705 162 SFIVVGGRREFSYEYI-LKEGKRIIYDLPILNETTNPSENNLYPFVF-LSTDGNLFIFAN--DRSILLNPETNEIL 233 (539)
Q Consensus 162 ~VyvvGG~~~~~~E~y-P~~~~~~w~~~~~l~~~~~~~~~~~yp~~~-~~~~G~Iyv~Gg--~~~e~yDp~tn~W~ 233 (539)
++|+....+ ..+.+| +.+. ........ . ...|... .-++|+||+... ..+.+||+.+....
T Consensus 120 ~l~v~~~~~-~~i~~~~~~~~--~~~~~~~~-~-------~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~ 184 (270)
T 1rwi_B 120 AVYVADRGN-NRVVKLAAGSK--TQTVLPFT-G-------LNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQV 184 (270)
T ss_dssp CEEEEEGGG-TEEEEECTTCC--SCEECCCC-S-------CCSCCCEEECTTCCEEEEEGGGTEEEEECTTTCCEE
T ss_pred CEEEEECCC-CEEEEEECCCc--eeEeeccc-c-------CCCceeEEEeCCCCEEEEECCCCEEEEEecCCCceE
Confidence 999875432 345555 2221 11111100 0 0123333 346899998864 46888999887654
No 63
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=97.18 E-value=0.1 Score=51.26 Aligned_cols=228 Identities=9% Similarity=0.058 Sum_probs=106.8
Q ss_pred ecCCCc-EEEecCCCC---CCCeEEEEeCCCCccceeecccccccccccceeEEccCCc-EEEEcCccCCeEEEE-ecCC
Q 039705 108 LSANGT-IVISGGWSS---RGRSVRYLSGCYHACYWKEHHWELSAKRWFSTQHILPDGS-FIVVGGRREFSYEYI-LKEG 181 (539)
Q Consensus 108 ~l~dG~-l~v~GG~~~---g~~~v~~ydP~~~t~~W~~~~~~m~~~R~y~s~~~L~dG~-VyvvGG~~~~~~E~y-P~~~ 181 (539)
..+||+ +|+...... ....+.++|+. +.+.... ......-...+.-+||+ +|+.+.. ...+.+| +.+.
T Consensus 48 ~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~--~~~~~~~---~~~~~~~~~~~~s~dg~~l~v~~~~-~~~v~~~d~~~~ 121 (353)
T 3vgz_A 48 YSQQENALWLATSQSRKLDKGGVVYRLDPV--TLEVTQA---IHNDLKPFGATINNTTQTLWFGNTV-NSAVTAIDAKTG 121 (353)
T ss_dssp EETTTTEEEEEECCCTTTEESEEEEEECTT--TCCEEEE---EEESSCCCSEEEETTTTEEEEEETT-TTEEEEEETTTC
T ss_pred ECCCCCEEEEEcCCCcCCCCCccEEEEcCC--CCeEEEE---EecCCCcceEEECCCCCEEEEEecC-CCEEEEEeCCCC
Confidence 345664 444432211 13578999987 5443221 22222223455566887 6665553 3466777 5554
Q ss_pred Ccce-eeccCccccCCCCCCCCcceEE-EeeCCc-EEEEE-c--CceeEeeCCCCeEEEEcccCCCCCCccCCCccEEec
Q 039705 182 KRII-YDLPILNETTNPSENNLYPFVF-LSTDGN-LFIFA-N--DRSILLNPETNEILHVFPILRGGSRNYPASATSALL 255 (539)
Q Consensus 182 ~~~w-~~~~~l~~~~~~~~~~~yp~~~-~~~~G~-Iyv~G-g--~~~e~yDp~tn~W~~~~p~mp~~~r~yp~~g~av~l 255 (539)
+. ...+.-............|..+ ..++|+ +|+.+ + ..+.+||+.+.+-.+.++.. + . .+ .+.+ +-
T Consensus 122 --~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~-~-~--~~-~~~~-~s 193 (353)
T 3vgz_A 122 --EVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNT-G-K--MS-TGLA-LD 193 (353)
T ss_dssp --CEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCC-C-T--TC-CCCE-EE
T ss_pred --eeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCC-C-C--cc-ceEE-EC
Confidence 22 1122110000000011123333 346776 66665 2 34889999988766444311 1 1 11 1222 22
Q ss_pred ccccCCCCCCCcccEEEEecCCCCCcccccCCCcccccCCceEEEEeeCCCCceeeeccC---CCceeceeEEecCCc-E
Q 039705 256 PIKLQDPNSNAIRAEVLICGGAKPEAGVLAGKGEFMNALQDCGRIEITNKSATWQREMMP---SPRVMGEMLLLPTGD-V 331 (539)
Q Consensus 256 pl~~~~~~~~~~~g~Iyv~GG~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~~M~---~~R~~~~~vvlpdG~-I 331 (539)
| .+.++|+... + ..+..+|+......+.. ... ......+...-|||+ +
T Consensus 194 ~----------dg~~l~~~~~-~----------------~~i~~~d~~~~~~~~~~-~~~~~~~~~~~~~~~~s~dg~~l 245 (353)
T 3vgz_A 194 S----------EGKRLYTTNA-D----------------GELITIDTADNKILSRK-KLLDDGKEHFFINISLDTARQRA 245 (353)
T ss_dssp T----------TTTEEEEECT-T----------------SEEEEEETTTTEEEEEE-ECCCSSSCCCEEEEEEETTTTEE
T ss_pred C----------CCCEEEEEcC-C----------------CeEEEEECCCCeEEEEE-EcCCCCCCcccceEEECCCCCEE
Confidence 2 1345666543 2 13456776421112222 221 111122345668888 5
Q ss_pred EEEcCcCCCCCCcccCCCCCCccEEEcCCCCCCCceEecCCCCCCccceeeEeeCCCCe-EEEecCC
Q 039705 332 LIINGAKKGTAGWNFATDPNTTPVLYEPDDPINERFSELTPTSKPRMCHSTSVVLPDGK-ILVAGSN 397 (539)
Q Consensus 332 ~vvGG~~~g~~g~~~~~~~~~~~e~YdP~t~~g~~Wt~~a~~~~~R~yhs~a~llpdG~-V~v~GG~ 397 (539)
|+.+... ..+.+||+++. +....-+...+ .+ ..+.|||+ +|++...
T Consensus 246 ~~~~~~~-------------~~v~~~d~~~~---~~~~~~~~~~~---~~-~~~s~dg~~l~v~~~~ 292 (353)
T 3vgz_A 246 FITDSKA-------------AEVLVVDTRNG---NILAKVAAPES---LA-VLFNPARNEAYVTHRQ 292 (353)
T ss_dssp EEEESSS-------------SEEEEEETTTC---CEEEEEECSSC---CC-EEEETTTTEEEEEETT
T ss_pred EEEeCCC-------------CEEEEEECCCC---cEEEEEEcCCC---ce-EEECCCCCEEEEEECC
Confidence 5544221 15789999887 54332222222 22 34568987 7777543
No 64
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=97.17 E-value=0.057 Score=54.27 Aligned_cols=133 Identities=11% Similarity=0.120 Sum_probs=72.0
Q ss_pred eEEEEECCCCCEEeCccCCCcccccceecCCCcEEEecCCCCCCCeEEEEeCCCCccceeecccccccccccceeEEccC
Q 039705 81 LAVEYDAESAAIRPLKILTDTWSSSGGLSANGTIVISGGWSSRGRSVRYLSGCYHACYWKEHHWELSAKRWFSTQHILPD 160 (539)
Q Consensus 81 ~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydP~~~t~~W~~~~~~m~~~R~y~s~~~L~d 160 (539)
...+||+.+++......... .....+..+||+.++++|.. ...+.+||.. +.+.... +.....-.+.+..+|
T Consensus 55 ~i~v~d~~~~~~~~~~~~~~-~v~~~~~spdg~~l~~~~~~--~~~v~v~d~~--~~~~~~~---~~~~~~~~~~~~s~d 126 (391)
T 1l0q_A 55 DVSIIDTATNNVIATVPAGS-SPQGVAVSPDGKQVYVTNMA--SSTLSVIDTT--SNTVAGT---VKTGKSPLGLALSPD 126 (391)
T ss_dssp EEEEEETTTTEEEEEEECSS-SEEEEEECTTSSEEEEEETT--TTEEEEEETT--TTEEEEE---EECSSSEEEEEECTT
T ss_pred eEEEEECCCCeEEEEEECCC-CccceEECCCCCEEEEEECC--CCEEEEEECC--CCeEEEE---EeCCCCcceEEECCC
Confidence 35678988877654332222 22233456788866555433 2679999998 5544322 222222234555668
Q ss_pred CcEE-EEcCccCCeEEEE-ecCCCccee-eccCccccCCCCCCCCcceE-EEeeCCc-EEEEEcC--ceeEeeCCCCeEE
Q 039705 161 GSFI-VVGGRREFSYEYI-LKEGKRIIY-DLPILNETTNPSENNLYPFV-FLSTDGN-LFIFAND--RSILLNPETNEIL 233 (539)
Q Consensus 161 G~Vy-vvGG~~~~~~E~y-P~~~~~~w~-~~~~l~~~~~~~~~~~yp~~-~~~~~G~-Iyv~Gg~--~~e~yDp~tn~W~ 233 (539)
|+.+ +.++. ...+.+| ..+. +.. .... . ..+.. ...++|+ ||+.+.. .+.+||..+++..
T Consensus 127 g~~l~~~~~~-~~~v~~~d~~~~--~~~~~~~~---~-------~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~ 193 (391)
T 1l0q_A 127 GKKLYVTNNG-DKTVSVINTVTK--AVINTVSV---G-------RSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVI 193 (391)
T ss_dssp SSEEEEEETT-TTEEEEEETTTT--EEEEEEEC---C-------SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEE
T ss_pred CCEEEEEeCC-CCEEEEEECCCC--cEEEEEec---C-------CCcceEEECCCCCEEEEEeCCCCEEEEEECCCCeEE
Confidence 8744 55543 3466777 4443 322 1111 0 01222 3446775 5566654 4789999998765
Q ss_pred E
Q 039705 234 H 234 (539)
Q Consensus 234 ~ 234 (539)
.
T Consensus 194 ~ 194 (391)
T 1l0q_A 194 D 194 (391)
T ss_dssp E
T ss_pred E
Confidence 3
No 65
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=97.17 E-value=0.027 Score=57.37 Aligned_cols=230 Identities=12% Similarity=0.104 Sum_probs=116.5
Q ss_pred ecC-CCcEEEecCCCCCCCeEEEEeCCCCcccee-----eccccccc-ccccceeEEccCC-cEEEEcCccCCeEEEE-e
Q 039705 108 LSA-NGTIVISGGWSSRGRSVRYLSGCYHACYWK-----EHHWELSA-KRWFSTQHILPDG-SFIVVGGRREFSYEYI-L 178 (539)
Q Consensus 108 ~l~-dG~l~v~GG~~~g~~~v~~ydP~~~t~~W~-----~~~~~m~~-~R~y~s~~~L~dG-~VyvvGG~~~~~~E~y-P 178 (539)
..+ ++.++++|+.+ ..+++||.. +.... .... +.. ...-.+.+..++| .+++.|+.++ .+.+| .
T Consensus 89 ~~p~~~~~l~s~s~d---g~v~vw~~~--~~~~~~~~~~~~~~-~~~h~~~v~~~~~~p~~~~~l~s~~~dg-~i~iwd~ 161 (402)
T 2aq5_A 89 WCPHNDNVIASGSED---CTVMVWEIP--DGGLVLPLREPVIT-LEGHTKRVGIVAWHPTAQNVLLSAGCDN-VILVWDV 161 (402)
T ss_dssp ECTTCTTEEEEEETT---SEEEEEECC--TTCCSSCBCSCSEE-EECCSSCEEEEEECSSBTTEEEEEETTS-CEEEEET
T ss_pred eCCCCCCEEEEEeCC---CeEEEEEcc--CCCCccccCCceEE-ecCCCCeEEEEEECcCCCCEEEEEcCCC-EEEEEEC
Confidence 345 88999998863 579999987 44331 1111 221 1222234455676 5888887664 46677 4
Q ss_pred cCCCccee-eccCccccCCCCCCCCcceEEEeeCCcEEEEEcC--ceeEeeCCCCeEEEEcccCCCCCCccCCCccEEec
Q 039705 179 KEGKRIIY-DLPILNETTNPSENNLYPFVFLSTDGNLFIFAND--RSILLNPETNEILHVFPILRGGSRNYPASATSALL 255 (539)
Q Consensus 179 ~~~~~~w~-~~~~l~~~~~~~~~~~yp~~~~~~~G~Iyv~Gg~--~~e~yDp~tn~W~~~~p~mp~~~r~yp~~g~av~l 255 (539)
.+. +.. .... ....+ . --.+...++|++++.|+. .+.+||.++++....+.....+.+. ...+..
T Consensus 162 ~~~--~~~~~~~~-~~~~~----~-v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~----~~~~~~ 229 (402)
T 2aq5_A 162 GTG--AAVLTLGP-DVHPD----T-IYSVDWSRDGALICTSCRDKRVRVIEPRKGTVVAEKDRPHEGTRP----VHAVFV 229 (402)
T ss_dssp TTT--EEEEEECT-TTCCS----C-EEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECSSCSSSC----CEEEEC
T ss_pred CCC--CccEEEec-CCCCC----c-eEEEEECCCCCEEEEEecCCcEEEEeCCCCceeeeeccCCCCCcc----eEEEEc
Confidence 433 221 1110 01100 0 011233468988888875 4788999988765333111110111 122332
Q ss_pred ccccCCCCCCCcccEEEEecCCCCCcccccCCCcccccCCceEEEEeeCCCCceeeeccCCCceeceeEEecCCcEEEEc
Q 039705 256 PIKLQDPNSNAIRAEVLICGGAKPEAGVLAGKGEFMNALQDCGRIEITNKSATWQREMMPSPRVMGEMLLLPTGDVLIIN 335 (539)
Q Consensus 256 pl~~~~~~~~~~~g~Iyv~GG~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~~M~~~R~~~~~vvlpdG~I~vvG 335 (539)
| +++++++|.... ....+..+|+......-....+.....-.....-+||+.+++.
T Consensus 230 ~-----------~~~~l~~g~~~~-------------~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~ 285 (402)
T 2aq5_A 230 S-----------EGKILTTGFSRM-------------SERQVALWDTKHLEEPLSLQELDTSSGVLLPFFDPDTNIVYLC 285 (402)
T ss_dssp S-----------TTEEEEEEECTT-------------CCEEEEEEETTBCSSCSEEEECCCCSSCEEEEEETTTTEEEEE
T ss_pred C-----------CCcEEEEeccCC-------------CCceEEEEcCccccCCceEEeccCCCceeEEEEcCCCCEEEEE
Confidence 2 789999883110 0124566776431111111122222222233456899887654
Q ss_pred C-cCCCCCCcccCCCCCCccEEEcCCCCCCCc--eEecCCCCCCccceeeEeeCCCCeEEEecCC
Q 039705 336 G-AKKGTAGWNFATDPNTTPVLYEPDDPINER--FSELTPTSKPRMCHSTSVVLPDGKILVAGSN 397 (539)
Q Consensus 336 G-~~~g~~g~~~~~~~~~~~e~YdP~t~~g~~--Wt~~a~~~~~R~yhs~a~llpdG~V~v~GG~ 397 (539)
| .+ + .+.+||..+. + ...+....... ......+.|||++++.++.
T Consensus 286 g~~d-g------------~i~i~d~~~~---~~~~~~l~~~~~~~-~v~~~~~sp~~~~~~s~~~ 333 (402)
T 2aq5_A 286 GKGD-S------------SIRYFEITSE---APFLHYLSMFSSKE-SQRGMGYMPKRGLEVNKCE 333 (402)
T ss_dssp ETTC-S------------CEEEEEECSS---TTCEEEEEEECCSS-CCSEEEECCGGGSCGGGTE
T ss_pred EcCC-C------------eEEEEEecCC---CcceEeecccccCC-cccceEEecccccceecce
Confidence 4 33 2 5789998877 4 33332221111 1223456789988776654
No 66
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=97.17 E-value=0.16 Score=49.40 Aligned_cols=240 Identities=10% Similarity=0.089 Sum_probs=110.3
Q ss_pred EEEEECC--CCCEEeCccCC-CcccccceecCCCcEEEecCCCCCCCeEEEEeCCCCccceeecccccccccccceeEEc
Q 039705 82 AVEYDAE--SAAIRPLKILT-DTWSSSGGLSANGTIVISGGWSSRGRSVRYLSGCYHACYWKEHHWELSAKRWFSTQHIL 158 (539)
Q Consensus 82 ~~~yDp~--t~~w~~l~~~~-~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydP~~~t~~W~~~~~~m~~~R~y~s~~~L 158 (539)
..+||.. +++++.+.... .......+..+||+.+++++.. ...+.+||..+ ..+...... +.....-...+.-
T Consensus 62 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~--~~~i~~~d~~~-~~~~~~~~~-~~~~~~~~~~~~s 137 (343)
T 1ri6_A 62 VLAYRIAPDDGALTFAAESALPGSLTHISTDHQGQFVFVGSYN--AGNVSVTRLED-GLPVGVVDV-VEGLDGCHSANIS 137 (343)
T ss_dssp EEEEEECTTTCCEEEEEEEECSSCCSEEEECTTSSEEEEEETT--TTEEEEEEEET-TEEEEEEEE-ECCCTTBCCCEEC
T ss_pred EEEEEecCCCCceeeccccccCCCCcEEEEcCCCCEEEEEecC--CCeEEEEECCC-Ccccccccc-ccCCCCceEEEEC
Confidence 4566655 66776553221 1122233456788866555442 25688888730 112222211 2222222334556
Q ss_pred cCCcEEEEcCccCCeEEEE-ecCCCcceeecc--CccccCCCCCCCCcce-EEEeeCCc-EEEEEc--CceeEeeCC--C
Q 039705 159 PDGSFIVVGGRREFSYEYI-LKEGKRIIYDLP--ILNETTNPSENNLYPF-VFLSTDGN-LFIFAN--DRSILLNPE--T 229 (539)
Q Consensus 159 ~dG~VyvvGG~~~~~~E~y-P~~~~~~w~~~~--~l~~~~~~~~~~~yp~-~~~~~~G~-Iyv~Gg--~~~e~yDp~--t 229 (539)
+||+.+++++.....+.+| ..++ .+..... ..... ....|. +...++|+ ||+.+. ..+.+||.. +
T Consensus 138 ~dg~~l~~~~~~~~~v~~~d~~~~-~~~~~~~~~~~~~~-----~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~ 211 (343)
T 1ri6_A 138 PDNRTLWVPALKQDRICLFTVSDD-GHLVAQDPAEVTTV-----EGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPH 211 (343)
T ss_dssp TTSSEEEEEEGGGTEEEEEEECTT-SCEEEEEEEEEECS-----TTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTT
T ss_pred CCCCEEEEecCCCCEEEEEEecCC-CceeeecccccccC-----CCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCC
Confidence 6886444444333456677 5441 1332110 00000 011233 33457887 666653 347788874 3
Q ss_pred CeEE--EEcccCCCC--CCccCCCccEEecccccCCCCCCCccc-EEEEecCCCCCcccccCCCcccccCCceEEEEeeC
Q 039705 230 NEIL--HVFPILRGG--SRNYPASATSALLPIKLQDPNSNAIRA-EVLICGGAKPEAGVLAGKGEFMNALQDCGRIEITN 304 (539)
Q Consensus 230 n~W~--~~~p~mp~~--~r~yp~~g~av~lpl~~~~~~~~~~~g-~Iyv~GG~~~~~~~~~~~~~~~~a~~s~~~~d~~~ 304 (539)
.++. +.+..++.+ ....+ ...++ .| ++ .||+.+..+ ..+..||+..
T Consensus 212 g~~~~~~~~~~~~~~~~~~~~~--~~i~~---s~--------dg~~l~v~~~~~----------------~~i~v~d~~~ 262 (343)
T 1ri6_A 212 GNIECVQTLDMMPENFSDTRWA--ADIHI---TP--------DGRHLYACDRTA----------------SLITVFSVSE 262 (343)
T ss_dssp SCCEEEEEEECSCTTCCSCCCE--EEEEE---CT--------TSSEEEEEETTT----------------TEEEEEEECT
T ss_pred CcEEEEeeccccCccccccCCc--cceEE---CC--------CCCEEEEEecCC----------------CEEEEEEEcC
Confidence 4432 123223321 00110 01222 11 34 566655432 2456777753
Q ss_pred CCCceeee-ccCCCceeceeEEecCCcEEEEcCcCCCCCCcccCCCCCCccEEE--cCCCCCCCceEecCCCCC
Q 039705 305 KSATWQRE-MMPSPRVMGEMLLLPTGDVLIINGAKKGTAGWNFATDPNTTPVLY--EPDDPINERFSELTPTSK 375 (539)
Q Consensus 305 ~~~~W~~~-~M~~~R~~~~~vvlpdG~I~vvGG~~~g~~g~~~~~~~~~~~e~Y--dP~t~~g~~Wt~~a~~~~ 375 (539)
.+.+++.. .++....-.+...-+||+.+++++...+ .+.+| |+++. +++.+...+.
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~------------~v~v~~~d~~~g---~~~~~~~~~~ 321 (343)
T 1ri6_A 263 DGSVLSKEGFQPTETQPRGFNVDHSGKYLIAAGQKSH------------HISVYEIVGEQG---LLHEKGRYAV 321 (343)
T ss_dssp TSCCEEEEEEEECSSSCCCEEECTTSSEEEEECTTTC------------EEEEEEEETTTT---EEEEEEEEEC
T ss_pred CCCceEEeeeecCCCccceEEECCCCCEEEEecCCCC------------eEEEEEEcCCCc---eeeEcccccc
Confidence 23445543 3322111223455689986555553211 45677 77787 7877655444
No 67
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=97.16 E-value=0.095 Score=52.20 Aligned_cols=215 Identities=9% Similarity=0.045 Sum_probs=113.0
Q ss_pred CCeEEEEeCCCCccceeeccc----ccccccccceeEEccCCcEEEEcCccCCeEEEE-ecCCCcce-eeccCccccCCC
Q 039705 124 GRSVRYLSGCYHACYWKEHHW----ELSAKRWFSTQHILPDGSFIVVGGRREFSYEYI-LKEGKRII-YDLPILNETTNP 197 (539)
Q Consensus 124 ~~~v~~ydP~~~t~~W~~~~~----~m~~~R~y~s~~~L~dG~VyvvGG~~~~~~E~y-P~~~~~~w-~~~~~l~~~~~~ 197 (539)
..++.+|||. +.++...-. ....+. .+...++.++++|++... ...+.++ +++. +. ...+..
T Consensus 16 ~~~l~~~d~~--t~~~~~~i~~~~n~~~lg~-~~~~i~~~~~~lyv~~~~-~~~v~viD~~t~--~~~~~i~~~------ 83 (328)
T 3dsm_A 16 NATLSYYDPA--TCEVENEVFYRANGFKLGD-VAQSMVIRDGIGWIVVNN-SHVIFAIDINTF--KEVGRITGF------ 83 (328)
T ss_dssp CBEEEEEETT--TTEEECSHHHHHHSSCCBS-CEEEEEEETTEEEEEEGG-GTEEEEEETTTC--CEEEEEECC------
T ss_pred CceEEEEECC--CCEEhhhhHhhhcCcccCc-cceEEEEECCEEEEEEcC-CCEEEEEECccc--EEEEEcCCC------
Confidence 5789999998 777654210 011111 122334558899998753 3567777 6654 32 112211
Q ss_pred CCCCCcceEEEe-eCCcEEEEE--cCceeEeeCCCCeEEEEcccCCC-CCCccCCCccEEecccccCCCCCCCcccEEEE
Q 039705 198 SENNLYPFVFLS-TDGNLFIFA--NDRSILLNPETNEILHVFPILRG-GSRNYPASATSALLPIKLQDPNSNAIRAEVLI 273 (539)
Q Consensus 198 ~~~~~yp~~~~~-~~G~Iyv~G--g~~~e~yDp~tn~W~~~~p~mp~-~~r~yp~~g~av~lpl~~~~~~~~~~~g~Iyv 273 (539)
..|+.++. ++|+||+.. +..+.++|+++++..+.++.-.. +....| .+.++ .++++|+
T Consensus 84 ----~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p-~~i~~-------------~~~~lyv 145 (328)
T 3dsm_A 84 ----TSPRYIHFLSDEKAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGST-EQMVQ-------------YGKYVYV 145 (328)
T ss_dssp ----SSEEEEEEEETTEEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBC-CCEEE-------------ETTEEEE
T ss_pred ----CCCcEEEEeCCCeEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCc-ceEEE-------------ECCEEEE
Confidence 13455666 899999988 45688999999986643421110 001122 13222 1789999
Q ss_pred ecCCCCCcccccCCCcccccCCceEEEEeeCCCCceeee-cc-CCCceeceeEEecCCcEEEEcCcCCCCCCcccCCCCC
Q 039705 274 CGGAKPEAGVLAGKGEFMNALQDCGRIEITNKSATWQRE-MM-PSPRVMGEMLLLPTGDVLIINGAKKGTAGWNFATDPN 351 (539)
Q Consensus 274 ~GG~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~-~M-~~~R~~~~~vvlpdG~I~vvGG~~~g~~g~~~~~~~~ 351 (539)
..-.. ...+.+||+. +.+.... +. ..+ .+.+.-+||++|++.-.......|.. ..
T Consensus 146 ~~~~~---------------~~~v~viD~~--t~~~~~~i~~g~~p---~~i~~~~dG~l~v~~~~~~~~~~~~~---~~ 202 (328)
T 3dsm_A 146 NCWSY---------------QNRILKIDTE--TDKVVDELTIGIQP---TSLVMDKYNKMWTITDGGYEGSPYGY---EA 202 (328)
T ss_dssp EECTT---------------CCEEEEEETT--TTEEEEEEECSSCB---CCCEECTTSEEEEEBCCBCTTCSSCB---CC
T ss_pred EcCCC---------------CCEEEEEECC--CCeEEEEEEcCCCc---cceEEcCCCCEEEEECCCccCCcccc---CC
Confidence 85210 1356778875 2333322 22 222 23455689999998743211100100 01
Q ss_pred CccEEEcCCCCCCCceEecCCCCCCccceeeEeeCCCC-eEEEec
Q 039705 352 TTPVLYEPDDPINERFSELTPTSKPRMCHSTSVVLPDG-KILVAG 395 (539)
Q Consensus 352 ~~~e~YdP~t~~g~~Wt~~a~~~~~R~yhs~a~llpdG-~V~v~G 395 (539)
..+.++|+++. +....-..+....-++. ++.||| ++|++-
T Consensus 203 ~~v~~id~~t~---~v~~~~~~~~g~~p~~l-a~~~d~~~lyv~~ 243 (328)
T 3dsm_A 203 PSLYRIDAETF---TVEKQFKFKLGDWPSEV-QLNGTRDTLYWIN 243 (328)
T ss_dssp CEEEEEETTTT---EEEEEEECCTTCCCEEE-EECTTSCEEEEES
T ss_pred ceEEEEECCCC---eEEEEEecCCCCCceeE-EEecCCCEEEEEc
Confidence 36889999988 65532122211222233 345654 566753
No 68
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=97.16 E-value=0.09 Score=57.15 Aligned_cols=136 Identities=11% Similarity=-0.003 Sum_probs=70.6
Q ss_pred eEEEEECCCCCEEe-Ccc------CCCcccccceecCCCcEEEecCCCCCCCeEEEEeCCCCccceeeccccccccc-cc
Q 039705 81 LAVEYDAESAAIRP-LKI------LTDTWSSSGGLSANGTIVISGGWSSRGRSVRYLSGCYHACYWKEHHWELSAKR-WF 152 (539)
Q Consensus 81 ~~~~yDp~t~~w~~-l~~------~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydP~~~t~~W~~~~~~m~~~R-~y 152 (539)
...+||..+++... +.. .+.......+..+||+.+++|+.+ ..+++||.. +.+....-. ....- ..
T Consensus 213 ~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D---~~v~lWd~~--~~~~~~~~~-~~~~~~~~ 286 (611)
T 1nr0_A 213 TIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASAD---KTIKIWNVA--TLKVEKTIP-VGTRIEDQ 286 (611)
T ss_dssp CEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETT---SEEEEEETT--TTEEEEEEE-CCSSGGGC
T ss_pred cEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCC---CeEEEEeCC--CCceeeeec-CCCCccce
Confidence 36689988776543 211 222222234556799999999863 689999987 554432111 11000 01
Q ss_pred ceeEEccCCcEEEEcCccCCeEEEE-ecCCCcceeeccCccccCCCCCCCCcceEEEeeCCcEEEEEcC--ceeEeeCCC
Q 039705 153 STQHILPDGSFIVVGGRREFSYEYI-LKEGKRIIYDLPILNETTNPSENNLYPFVFLSTDGNLFIFAND--RSILLNPET 229 (539)
Q Consensus 153 ~s~~~L~dG~VyvvGG~~~~~~E~y-P~~~~~~w~~~~~l~~~~~~~~~~~yp~~~~~~~G~Iyv~Gg~--~~e~yDp~t 229 (539)
...+.. +++.++.++.++ .+.+| +... +.. ..+....+ . --.+...+||+.++.|+. .+.+||..+
T Consensus 287 ~~~~~~-~~~~l~s~s~d~-~i~~~~~~~~--~~~--~~~~gh~~----~-v~~l~~spdg~~l~s~s~D~~v~~Wd~~~ 355 (611)
T 1nr0_A 287 QLGIIW-TKQALVSISANG-FINFVNPELG--SID--QVRYGHNK----A-ITALSSSADGKTLFSADAEGHINSWDIST 355 (611)
T ss_dssp EEEEEE-CSSCEEEEETTC-CEEEEETTTT--EEE--EEECCCSS----C-EEEEEECTTSSEEEEEETTSCEEEEETTT
T ss_pred eEEEEE-cCCEEEEEeCCC-cEEEEeCCCC--Ccc--eEEcCCCC----C-EEEEEEeCCCCEEEEEeCCCcEEEEECCC
Confidence 112223 677777776553 45566 4432 211 11111100 0 001233468888888874 467788776
Q ss_pred CeEE
Q 039705 230 NEIL 233 (539)
Q Consensus 230 n~W~ 233 (539)
.+..
T Consensus 356 ~~~~ 359 (611)
T 1nr0_A 356 GISN 359 (611)
T ss_dssp CCEE
T ss_pred Ccee
Confidence 6543
No 69
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=97.15 E-value=0.041 Score=53.67 Aligned_cols=240 Identities=10% Similarity=0.093 Sum_probs=115.2
Q ss_pred ecCCCcEEEecCCCCCCCeEEEEeCCCCccceeecccccccccccceeEEc-c--CCcEEEEcCccCCeEEEE-ecCCCc
Q 039705 108 LSANGTIVISGGWSSRGRSVRYLSGCYHACYWKEHHWELSAKRWFSTQHIL-P--DGSFIVVGGRREFSYEYI-LKEGKR 183 (539)
Q Consensus 108 ~l~dG~l~v~GG~~~g~~~v~~ydP~~~t~~W~~~~~~m~~~R~y~s~~~L-~--dG~VyvvGG~~~~~~E~y-P~~~~~ 183 (539)
+.+||+.+++|+.+ ..+++||.. ..+...+.. +......-..+.. + +|++++.|+.+ .++.+| ..++
T Consensus 17 ~s~~g~~las~s~D---~~v~iw~~~--~~~~~~~~~-l~gH~~~V~~v~~s~~~~g~~l~s~s~D-~~v~iWd~~~~-- 87 (297)
T 2pm7_B 17 MDYYGKRMATCSSD---KTIKIFEVE--GETHKLIDT-LTGHEGPVWRVDWAHPKFGTILASCSYD-GKVMIWKEENG-- 87 (297)
T ss_dssp ECTTSSEEEEEETT---SCEEEEEBC--SSCBCCCEE-ECCCSSCEEEEEECCGGGCSEEEEEETT-TEEEEEEBSSS--
T ss_pred ECCCCCEEEEEeCC---CEEEEEecC--CCCcEEEEE-EccccCCeEEEEecCCCcCCEEEEEcCC-CEEEEEEcCCC--
Confidence 34789999999863 678999976 433322222 3221111122222 2 37888888765 467777 5543
Q ss_pred ceeeccCccccCCCCCCCCcceEEEeeC--CcEEEEEcCc--eeEeeCCCCe-EEEEcccCCCCCCccCCCccEEecccc
Q 039705 184 IIYDLPILNETTNPSENNLYPFVFLSTD--GNLFIFANDR--SILLNPETNE-ILHVFPILRGGSRNYPASATSALLPIK 258 (539)
Q Consensus 184 ~w~~~~~l~~~~~~~~~~~yp~~~~~~~--G~Iyv~Gg~~--~e~yDp~tn~-W~~~~p~mp~~~r~yp~~g~av~lpl~ 258 (539)
+|.....+..... . -..+...++ |++++.|+.+ +.+||.+++. +. .-.+.. .... .-+....|-.
T Consensus 88 ~~~~~~~~~~h~~----~-v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~--~~~~~~-h~~~--v~~~~~~p~~ 157 (297)
T 2pm7_B 88 RWSQIAVHAVHSA----S-VNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTS--PIIIDA-HAIG--VNSASWAPAT 157 (297)
T ss_dssp CBCCCEEECCCSS----C-EEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBC--CEEEEC-CSSC--EEEEEECCCC
T ss_pred ceEEEEEeecCCC----c-eeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCcee--eeeeec-ccCc--cceEeecCCc
Confidence 3422111111100 0 001122344 7888888754 6788887652 21 000111 0000 0011111100
Q ss_pred cC--CCCCCCcccEEEEecCCCCCcccccCCCcccccCCceEEEEeeCCCCceeee-ccCC--CceeceeEEecC---Cc
Q 039705 259 LQ--DPNSNAIRAEVLICGGAKPEAGVLAGKGEFMNALQDCGRIEITNKSATWQRE-MMPS--PRVMGEMLLLPT---GD 330 (539)
Q Consensus 259 ~~--~~~~~~~~g~Iyv~GG~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~-~M~~--~R~~~~~vvlpd---G~ 330 (539)
.. +......+++++++|+.+. .+..+|+......|... .+.. .... +...-|+ ++
T Consensus 158 ~~~~~~~~~~~~~~~l~sgs~D~----------------~v~lwd~~~~~~~~~~~~~l~~H~~~V~-~v~~sp~~~~~~ 220 (297)
T 2pm7_B 158 IEEDGEHNGTKESRKFVTGGADN----------------LVKIWKYNSDAQTYVLESTLEGHSDWVR-DVAWSPTVLLRS 220 (297)
T ss_dssp ------------CCEEEEEETTS----------------CEEEEEEETTTTEEEEEEEECCCSSCEE-EEEECCCCSSSE
T ss_pred ccccccCCCCCCcceEEEEcCCC----------------cEEEEEEcCCCceEEEEEEecCCCCceE-EEEECCCCCCce
Confidence 00 0000000256788888651 35667776433446543 4432 2222 2233567 47
Q ss_pred EEEEcCcCCCCCCcccCCCCCCccEEEcCCCCCCCceEe--cCCCCCCccceeeEeeCCCCeEEEecCCC
Q 039705 331 VLIINGAKKGTAGWNFATDPNTTPVLYEPDDPINERFSE--LTPTSKPRMCHSTSVVLPDGKILVAGSNP 398 (539)
Q Consensus 331 I~vvGG~~~g~~g~~~~~~~~~~~e~YdP~t~~g~~Wt~--~a~~~~~R~yhs~a~llpdG~V~v~GG~~ 398 (539)
+++.|+.+. ++.+||.++..+ .|.. +........-. ....-|||+.+++||.+
T Consensus 221 ~las~s~D~-------------~v~iWd~~~~~~-~~~~~~~~~~~~~~~v~-~~~~s~~g~~las~~~D 275 (297)
T 2pm7_B 221 YMASVSQDR-------------TCIIWTQDNEQG-PWKKTLLKEEKFPDVLW-RASWSLSGNVLALSGGD 275 (297)
T ss_dssp EEEEEETTS-------------CEEEEEESSTTS-CCEEEESSSSCCSSCEE-EEEECSSSCCEEEEETT
T ss_pred EEEEEECCC-------------cEEEEEeCCCCC-ccceeeeecccCCCcEE-EEEECCCCCEEEEEcCC
Confidence 888887652 678999876421 3542 21111111111 23457999999998863
No 70
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=97.15 E-value=0.023 Score=55.69 Aligned_cols=222 Identities=14% Similarity=0.133 Sum_probs=116.3
Q ss_pred ecCCCcEEEecCCCCCCCeEEEEeCCCCccceeecccccccc-cccceeEEccCCcEEEEcCccCCeEEEE-ecCCCcce
Q 039705 108 LSANGTIVISGGWSSRGRSVRYLSGCYHACYWKEHHWELSAK-RWFSTQHILPDGSFIVVGGRREFSYEYI-LKEGKRII 185 (539)
Q Consensus 108 ~l~dG~l~v~GG~~~g~~~v~~ydP~~~t~~W~~~~~~m~~~-R~y~s~~~L~dG~VyvvGG~~~~~~E~y-P~~~~~~w 185 (539)
+.+||.++++|+.. ..+++||.. +..-.. . +... ..-.++...+|++.++.|+.+ .++.+| ..+. +-
T Consensus 21 fsp~~~~l~s~~~d---g~v~lWd~~--~~~~~~--~-~~~~~~~v~~~~~~~~~~~l~s~s~d-~~i~vwd~~~~--~~ 89 (304)
T 2ynn_A 21 FHPTEPWVLTTLYS---GRVELWNYE--TQVEVR--S-IQVTETPVRAGKFIARKNWIIVGSDD-FRIRVFNYNTG--EK 89 (304)
T ss_dssp ECSSSSEEEEEETT---SEEEEEETT--TTEEEE--E-EECCSSCEEEEEEEGGGTEEEEEETT-SEEEEEETTTC--CE
T ss_pred ECCCCCEEEEEcCC---CcEEEEECC--CCceeE--E-eeccCCcEEEEEEeCCCCEEEEECCC-CEEEEEECCCC--cE
Confidence 45789999999863 679999987 443221 1 2211 112244556789998888865 456777 4443 21
Q ss_pred eeccCccccCCCCCCCCcceEEEeeCCcEEEEEcC--ceeEeeCCCCeEEEEcccCCCCCCccCCCccEEecccccCCCC
Q 039705 186 YDLPILNETTNPSENNLYPFVFLSTDGNLFIFAND--RSILLNPETNEILHVFPILRGGSRNYPASATSALLPIKLQDPN 263 (539)
Q Consensus 186 ~~~~~l~~~~~~~~~~~yp~~~~~~~G~Iyv~Gg~--~~e~yDp~tn~W~~~~p~mp~~~r~yp~~g~av~lpl~~~~~~ 263 (539)
. .. +....+ . --.+...+++++++.|+. .+.+||.+++.-. ...+.+ .... .-+....|
T Consensus 90 ~-~~-~~~h~~----~-v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~--~~~~~~-h~~~--v~~v~~~p------- 150 (304)
T 2ynn_A 90 V-VD-FEAHPD----Y-IRSIAVHPTKPYVLSGSDDLTVKLWNWENNWAL--EQTFEG-HEHF--VMCVAFNP------- 150 (304)
T ss_dssp E-EE-EECCSS----C-EEEEEECSSSSEEEEEETTSCEEEEEGGGTTEE--EEEECC-CCSC--EEEEEECT-------
T ss_pred E-EE-EeCCCC----c-EEEEEEcCCCCEEEEECCCCeEEEEECCCCcch--hhhhcc-cCCc--EEEEEECC-------
Confidence 1 00 111111 0 012234478998888875 4788998776321 111222 1110 01112211
Q ss_pred CCCcccEEEEecCCCCCcccccCCCcccccCCceEEEEeeCCCCceeeeccCCCceeceeEE--ecCCcEEEEcCcCCCC
Q 039705 264 SNAIRAEVLICGGAKPEAGVLAGKGEFMNALQDCGRIEITNKSATWQREMMPSPRVMGEMLL--LPTGDVLIINGAKKGT 341 (539)
Q Consensus 264 ~~~~~g~Iyv~GG~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~~M~~~R~~~~~vv--lpdG~I~vvGG~~~g~ 341 (539)
.++++++.|+.+. ++..+|+.......... ....+....... .+|+++++.|+.+ +
T Consensus 151 ---~~~~~l~sgs~D~----------------~v~iwd~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~l~s~s~D-~- 208 (304)
T 2ynn_A 151 ---KDPSTFASGCLDR----------------TVKVWSLGQSTPNFTLT-TGQERGVNYVDYYPLPDKPYMITASDD-L- 208 (304)
T ss_dssp ---TCTTEEEEEETTS----------------EEEEEETTCSSCSEEEE-CCCTTCEEEEEECCSTTCCEEEEEETT-S-
T ss_pred ---CCCCEEEEEeCCC----------------eEEEEECCCCCccceec-cCCcCcEEEEEEEEcCCCCEEEEEcCC-C-
Confidence 1567888888652 35567764322222221 111111111112 3588899988865 2
Q ss_pred CCcccCCCCCCccEEEcCCCCCCCce-EecCCCCCCccceeeEeeCCCCeEEEecCCC
Q 039705 342 AGWNFATDPNTTPVLYEPDDPINERF-SELTPTSKPRMCHSTSVVLPDGKILVAGSNP 398 (539)
Q Consensus 342 ~g~~~~~~~~~~~e~YdP~t~~g~~W-t~~a~~~~~R~yhs~a~llpdG~V~v~GG~~ 398 (539)
++.+||.++. +- ..+... ...-..+.+.||++++++|+.+
T Consensus 209 -----------~i~iWd~~~~---~~~~~~~~h---~~~v~~~~~~p~~~~l~s~s~D 249 (304)
T 2ynn_A 209 -----------TIKIWDYQTK---SCVATLEGH---MSNVSFAVFHPTLPIIISGSED 249 (304)
T ss_dssp -----------EEEEEETTTT---EEEEEEECC---SSCEEEEEECSSSSEEEEEETT
T ss_pred -----------eEEEEeCCCC---ccceeeCCC---CCCEEEEEECCCCCEEEEEcCC
Confidence 6889998876 32 222111 1112234568999999999864
No 71
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=97.13 E-value=0.22 Score=48.50 Aligned_cols=141 Identities=11% Similarity=0.096 Sum_probs=72.6
Q ss_pred eEEEEECCCCCE-EeCccCCCcccccceecCCCcEEEecCCCCCCCeEEEEeCCCCccceeecccccccccccceeEEcc
Q 039705 81 LAVEYDAESAAI-RPLKILTDTWSSSGGLSANGTIVISGGWSSRGRSVRYLSGCYHACYWKEHHWELSAKRWFSTQHILP 159 (539)
Q Consensus 81 ~~~~yDp~t~~w-~~l~~~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydP~~~t~~W~~~~~~m~~~R~y~s~~~L~ 159 (539)
...+||+.+++. .........-+.+.++.+||+.++++....+...+.+||.. +.+.... +.....-...+.-+
T Consensus 63 ~i~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~--~~~~~~~---~~~~~~~~~~~~sp 137 (331)
T 3u4y_A 63 TLVQIETQLEPPKVVAIQEGQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFL--KNKFIST---IPIPYDAVGIAISP 137 (331)
T ss_dssp EEEEEECSSSSCEEEEEEECSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETT--TTEEEEE---EECCTTEEEEEECT
T ss_pred eEEEEECCCCceeEEecccCCCCccceEECCCCCEEEEecCCCCcccEEEEECC--CCCeEEE---EECCCCccceEECC
Confidence 356789988875 22211222222224566889876655432222389999997 5554332 22222224556667
Q ss_pred CCc-EEEEcCccCCeEEEE-ecCCCcceeeccCccccCCCCCCCCcceE-EEeeCCc-EEEEEc--CceeEeeCCCCeE
Q 039705 160 DGS-FIVVGGRREFSYEYI-LKEGKRIIYDLPILNETTNPSENNLYPFV-FLSTDGN-LFIFAN--DRSILLNPETNEI 232 (539)
Q Consensus 160 dG~-VyvvGG~~~~~~E~y-P~~~~~~w~~~~~l~~~~~~~~~~~yp~~-~~~~~G~-Iyv~Gg--~~~e~yDp~tn~W 232 (539)
||+ +|+.+..+...+.+| -..+ ....... ..... ....|.. ...+||+ ||+.+. ..+.+||..+.+.
T Consensus 138 dg~~l~~~~~~~~~~i~~~~~~~~-g~~~~~~-~~~~~----~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~ 210 (331)
T 3u4y_A 138 NGNGLILIDRSSANTVRRFKIDAD-GVLFDTG-QEFIS----GGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPEN 210 (331)
T ss_dssp TSSCEEEEEETTTTEEEEEEECTT-CCEEEEE-EEEEC----SSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTS
T ss_pred CCCEEEEEecCCCceEEEEEECCC-CcEeecC-Ccccc----CCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcc
Confidence 886 666554333326666 3322 1111110 00000 0112333 3457897 777764 4578899988775
No 72
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=97.10 E-value=0.16 Score=52.21 Aligned_cols=243 Identities=15% Similarity=0.084 Sum_probs=124.9
Q ss_pred eEEEEECCCCCEEeCccCCCcccccceecCCCcEEEecCCCCCCCeEEEEeCCCCccceeecccccccccccceeEEccC
Q 039705 81 LAVEYDAESAAIRPLKILTDTWSSSGGLSANGTIVISGGWSSRGRSVRYLSGCYHACYWKEHHWELSAKRWFSTQHILPD 160 (539)
Q Consensus 81 ~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydP~~~t~~W~~~~~~m~~~R~y~s~~~L~d 160 (539)
...+||..+++....-..+... -.....++..+++|+.+ ..+.+||.. +.+-.. . +........+... +
T Consensus 180 ~i~vwd~~~~~~~~~~~~h~~~--v~~~~~~~~~l~s~s~d---g~i~~wd~~--~~~~~~--~-~~~~~~~v~~~~~-~ 248 (445)
T 2ovr_B 180 TLKVWNAETGECIHTLYGHTST--VRCMHLHEKRVVSGSRD---ATLRVWDIE--TGQCLH--V-LMGHVAAVRCVQY-D 248 (445)
T ss_dssp CEEEEETTTTEEEEEECCCSSC--EEEEEEETTEEEEEETT---SEEEEEESS--SCCEEE--E-EECCSSCEEEEEE-C
T ss_pred eEEEEECCcCcEEEEECCCCCc--EEEEEecCCEEEEEeCC---CEEEEEECC--CCcEEE--E-EcCCcccEEEEEE-C
Confidence 3567888877543322222111 11222367778888753 678999987 433211 1 2222222233344 8
Q ss_pred CcEEEEcCccCCeEEEE-ecCCCccee-eccCccccCCCCCCCCcceEEEeeCCcEEEEEcC--ceeEeeCCCCeEEEEc
Q 039705 161 GSFIVVGGRREFSYEYI-LKEGKRIIY-DLPILNETTNPSENNLYPFVFLSTDGNLFIFAND--RSILLNPETNEILHVF 236 (539)
Q Consensus 161 G~VyvvGG~~~~~~E~y-P~~~~~~w~-~~~~l~~~~~~~~~~~yp~~~~~~~G~Iyv~Gg~--~~e~yDp~tn~W~~~~ 236 (539)
|+.+++|+.++ .+.+| ..+. +.. ... ... .+...+..+|+.++.|+. .+.+||..+++-...+
T Consensus 249 ~~~l~~~~~dg-~i~iwd~~~~--~~~~~~~---~~~-------~~v~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~ 315 (445)
T 2ovr_B 249 GRRVVSGAYDF-MVKVWDPETE--TCLHTLQ---GHT-------NRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTL 315 (445)
T ss_dssp SSCEEEEETTS-CEEEEEGGGT--EEEEEEC---CCS-------SCEEEEEECSSEEEEEETTSCEEEEETTTCCEEEEE
T ss_pred CCEEEEEcCCC-EEEEEECCCC--cEeEEec---CCC-------CceEEEEECCCEEEEEeCCCeEEEEECCCCCEEEEE
Confidence 88888888764 45666 4433 221 111 110 112344458888888874 4788999887754333
Q ss_pred ccCCCCCCccCCCccEEecccccCCCCCCCcccEEEEecCCCCCcccccCCCcccccCCceEEEEeeCCCCceeeeccCC
Q 039705 237 PILRGGSRNYPASATSALLPIKLQDPNSNAIRAEVLICGGAKPEAGVLAGKGEFMNALQDCGRIEITNKSATWQREMMPS 316 (539)
Q Consensus 237 p~mp~~~r~yp~~g~av~lpl~~~~~~~~~~~g~Iyv~GG~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~~M~~ 316 (539)
.. ... ....+. .+++.+++|+.+. .+..+|+.......+. ..+.
T Consensus 316 ---~~-~~~----~v~~~~-----------~~~~~l~~~~~dg----------------~i~vwd~~~~~~~~~~-~~~~ 359 (445)
T 2ovr_B 316 ---TG-HQS----LTSGME-----------LKDNILVSGNADS----------------TVKIWDIKTGQCLQTL-QGPN 359 (445)
T ss_dssp ---CC-CCS----CEEEEE-----------EETTEEEEEETTS----------------CEEEEETTTCCEEEEE-CSTT
T ss_pred ---cC-Ccc----cEEEEE-----------EeCCEEEEEeCCC----------------eEEEEECCCCcEEEEE-ccCC
Confidence 22 111 111221 2566778887651 3556776421111111 1111
Q ss_pred -CceeceeEEecCCcEEEEcCcCCCCCCcccCCCCCCccEEEcCCCCCCCceE-ecCCCC--CCccceeeEeeCCCCeEE
Q 039705 317 -PRVMGEMLLLPTGDVLIINGAKKGTAGWNFATDPNTTPVLYEPDDPINERFS-ELTPTS--KPRMCHSTSVVLPDGKIL 392 (539)
Q Consensus 317 -~R~~~~~vvlpdG~I~vvGG~~~g~~g~~~~~~~~~~~e~YdP~t~~g~~Wt-~~a~~~--~~R~yhs~a~llpdG~V~ 392 (539)
.......+. .+++.+++|+.+ | ++.+||..+. +.. .+.... .....-.....-|||+++
T Consensus 360 ~~~~~v~~~~-~~~~~l~s~~~d-g------------~v~iwd~~~~---~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l 422 (445)
T 2ovr_B 360 KHQSAVTCLQ-FNKNFVITSSDD-G------------TVKLWDLKTG---EFIRNLVTLESGGSGGVVWRIRASNTKLVC 422 (445)
T ss_dssp SCSSCEEEEE-ECSSEEEEEETT-S------------EEEEEETTTC---CEEEEEEECTTGGGTCEEEEEEECSSEEEE
T ss_pred CCCCCEEEEE-ECCCEEEEEeCC-C------------eEEEEECCCC---ceeeeeeccccCCCCceEEEEEecCCEEEE
Confidence 111122233 489999998865 2 6789999887 543 221110 011111123456999999
Q ss_pred EecCCCCC
Q 039705 393 VAGSNPHS 400 (539)
Q Consensus 393 v~GG~~~~ 400 (539)
++|+.+..
T Consensus 423 a~~~~dg~ 430 (445)
T 2ovr_B 423 AVGSRNGT 430 (445)
T ss_dssp EEECSSSS
T ss_pred EEcccCCC
Confidence 99997543
No 73
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=97.10 E-value=0.037 Score=55.72 Aligned_cols=246 Identities=10% Similarity=0.005 Sum_probs=117.4
Q ss_pred EEEEECCCCCEEeCccCCCcccccceecCCCcEEEecCCCCCCCeEEEEeCCCCccceeeccccccccc-----------
Q 039705 82 AVEYDAESAAIRPLKILTDTWSSSGGLSANGTIVISGGWSSRGRSVRYLSGCYHACYWKEHHWELSAKR----------- 150 (539)
Q Consensus 82 ~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydP~~~t~~W~~~~~~m~~~R----------- 150 (539)
..+||........+. .+..........++|+.+++|+.. ..+.+||.. +.+....-. .....
T Consensus 132 i~i~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d---~~i~iwd~~--~~~~~~~~~-~~~~~~~~~~~~~~~~ 204 (425)
T 1r5m_A 132 LRLWNKTGALLNVLN-FHRAPIVSVKWNKDGTHIISMDVE---NVTILWNVI--SGTVMQHFE-LKETGGSSINAENHSG 204 (425)
T ss_dssp EEEEETTSCEEEEEC-CCCSCEEEEEECTTSSEEEEEETT---CCEEEEETT--TTEEEEEEC-CC--------------
T ss_pred EEEEeCCCCeeeecc-CCCccEEEEEECCCCCEEEEEecC---CeEEEEECC--CCcEEEEee-ccccCccceeeccccC
Confidence 456774333333332 222222223456789988888753 568888886 443222111 11110
Q ss_pred ---ccceeEEccCCcEEEEcCccCCeEEEE-ecCCCcce-eeccCccccCCCCCCCCcceEEEeeCCcEEEEEcC--cee
Q 039705 151 ---WFSTQHILPDGSFIVVGGRREFSYEYI-LKEGKRII-YDLPILNETTNPSENNLYPFVFLSTDGNLFIFAND--RSI 223 (539)
Q Consensus 151 ---~y~s~~~L~dG~VyvvGG~~~~~~E~y-P~~~~~~w-~~~~~l~~~~~~~~~~~yp~~~~~~~G~Iyv~Gg~--~~e 223 (539)
.-.+.+..+++ .+++|+.++ .+.+| ..+. +. .... .... . --.+...++|++++.|+. .+.
T Consensus 205 ~~~~~~~~~~~~~~-~~~~~~~~g-~i~~~d~~~~--~~~~~~~---~~~~----~-i~~~~~~~~~~~l~~~~~d~~i~ 272 (425)
T 1r5m_A 205 DGSLGVDVEWVDDD-KFVIPGPKG-AIFVYQITEK--TPTGKLI---GHHG----P-ISVLEFNDTNKLLLSASDDGTLR 272 (425)
T ss_dssp -CCCBSCCEEEETT-EEEEECGGG-CEEEEETTCS--SCSEEEC---CCSS----C-EEEEEEETTTTEEEEEETTSCEE
T ss_pred CcceeeEEEEcCCC-EEEEEcCCC-eEEEEEcCCC--ceeeeec---cCCC----c-eEEEEECCCCCEEEEEcCCCEEE
Confidence 02233444454 567777654 45566 3332 11 1111 0000 0 012234568988888874 477
Q ss_pred EeeCCCCeEEEEcccCCCCCCccCCCccEEecccccCCCCCCCcccEEEEecCCCCCcccccCCCcccccCCceEEEEee
Q 039705 224 LLNPETNEILHVFPILRGGSRNYPASATSALLPIKLQDPNSNAIRAEVLICGGAKPEAGVLAGKGEFMNALQDCGRIEIT 303 (539)
Q Consensus 224 ~yDp~tn~W~~~~p~mp~~~r~yp~~g~av~lpl~~~~~~~~~~~g~Iyv~GG~~~~~~~~~~~~~~~~a~~s~~~~d~~ 303 (539)
+||..+.+....+..... .. -.....| ++ ++++|+.+ ..+..+|+.
T Consensus 273 i~d~~~~~~~~~~~~~~~--~i----~~~~~~~-----------~~-~l~~~~~d----------------~~i~i~d~~ 318 (425)
T 1r5m_A 273 IWHGGNGNSQNCFYGHSQ--SI----VSASWVG-----------DD-KVISCSMD----------------GSVRLWSLK 318 (425)
T ss_dssp EECSSSBSCSEEECCCSS--CE----EEEEEET-----------TT-EEEEEETT----------------SEEEEEETT
T ss_pred EEECCCCccceEecCCCc--cE----EEEEECC-----------CC-EEEEEeCC----------------CcEEEEECC
Confidence 899877553322211110 00 1112211 45 66666654 134567754
Q ss_pred CCCCceeee-ccCCCceeceeEEecCCcEEEEcCcCCCCCCcccCCCCCCccEEEcCCCCCCCc-------------e--
Q 039705 304 NKSATWQRE-MMPSPRVMGEMLLLPTGDVLIINGAKKGTAGWNFATDPNTTPVLYEPDDPINER-------------F-- 367 (539)
Q Consensus 304 ~~~~~W~~~-~M~~~R~~~~~vvlpdG~I~vvGG~~~g~~g~~~~~~~~~~~e~YdP~t~~g~~-------------W-- 367 (539)
. .+-... ....... .+....|||+++++|+.+ | .+.+||..+. + |
T Consensus 319 ~--~~~~~~~~~~~~~i-~~~~~s~~~~~l~~~~~d-g------------~i~i~~~~~~---~~~~~~~~~~~~~~~~~ 379 (425)
T 1r5m_A 319 Q--NTLLALSIVDGVPI-FAGRISQDGQKYAVAFMD-G------------QVNVYDLKKL---NSKSRSLYGNRDGILNP 379 (425)
T ss_dssp T--TEEEEEEECTTCCE-EEEEECTTSSEEEEEETT-S------------CEEEEECHHH---HC--------------C
T ss_pred C--CcEeEecccCCccE-EEEEEcCCCCEEEEEECC-C------------eEEEEECCCC---ccceeeeecccccccCc
Confidence 2 221111 2222222 233557899999998765 2 5678887665 3 1
Q ss_pred ---EecCCCCCCcc--ceeeEeeCCCCeEEEecCCCC
Q 039705 368 ---SELTPTSKPRM--CHSTSVVLPDGKILVAGSNPH 399 (539)
Q Consensus 368 ---t~~a~~~~~R~--yhs~a~llpdG~V~v~GG~~~ 399 (539)
..+..+..... .-....+.|||+.+++|+.+.
T Consensus 380 ~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg 416 (425)
T 1r5m_A 380 LPIPLYASYQSSQDNDYIFDLSWNCAGNKISVAYSLQ 416 (425)
T ss_dssp EECCEEEEECCTTCCCCEEEEEECTTSSEEEEEESSS
T ss_pred ccchhhhhhcCcccCCceEEEEccCCCceEEEEecCc
Confidence 01111111111 122345679999998888643
No 74
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=97.08 E-value=0.12 Score=56.99 Aligned_cols=251 Identities=11% Similarity=0.073 Sum_probs=123.3
Q ss_pred eEEEEECCCCCE-----EeCccCCCcccccceecCCCcEEEecCCCCCCCeEEEEeCCCCccceeeccccccc-ccccce
Q 039705 81 LAVEYDAESAAI-----RPLKILTDTWSSSGGLSANGTIVISGGWSSRGRSVRYLSGCYHACYWKEHHWELSA-KRWFST 154 (539)
Q Consensus 81 ~~~~yDp~t~~w-----~~l~~~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydP~~~t~~W~~~~~~m~~-~R~y~s 154 (539)
...+||..++.- ......|.......++.+||+++++|+.+ ..+++||.. +..-.. . +.. ...-.+
T Consensus 406 ~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~D---g~v~vwd~~--~~~~~~--~-~~~h~~~v~~ 477 (694)
T 3dm0_A 406 SIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWD---GELRLWDLA--AGVSTR--R-FVGHTKDVLS 477 (694)
T ss_dssp EEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETT---SEEEEEETT--TTEEEE--E-EECCSSCEEE
T ss_pred cEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeCC---CcEEEEECC--CCccee--E-EeCCCCCEEE
Confidence 356788765321 11111232222334456799999999863 689999987 433211 1 211 111223
Q ss_pred eEEccCCcEEEEcCccCCeEEEE-ecCCCcceeeccCccccCCCCCCCCcceEEEeeCC--cEEEEEcC--ceeEeeCCC
Q 039705 155 QHILPDGSFIVVGGRREFSYEYI-LKEGKRIIYDLPILNETTNPSENNLYPFVFLSTDG--NLFIFAND--RSILLNPET 229 (539)
Q Consensus 155 ~~~L~dG~VyvvGG~~~~~~E~y-P~~~~~~w~~~~~l~~~~~~~~~~~yp~~~~~~~G--~Iyv~Gg~--~~e~yDp~t 229 (539)
++.-+||+.++.|+.+. ++.+| .... .............+ .-..+...+++ .+++.|+. .+.+||..+
T Consensus 478 ~~~s~~~~~l~s~s~D~-~i~iwd~~~~-~~~~~~~~~~~h~~-----~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~ 550 (694)
T 3dm0_A 478 VAFSLDNRQIVSASRDR-TIKLWNTLGE-CKYTISEGGEGHRD-----WVSCVRFSPNTLQPTIVSASWDKTVKVWNLSN 550 (694)
T ss_dssp EEECTTSSCEEEEETTS-CEEEECTTSC-EEEEECSSTTSCSS-----CEEEEEECSCSSSCEEEEEETTSCEEEEETTT
T ss_pred EEEeCCCCEEEEEeCCC-EEEEEECCCC-cceeeccCCCCCCC-----cEEEEEEeCCCCcceEEEEeCCCeEEEEECCC
Confidence 44556888888888763 46666 3221 01111111111100 01112223454 46666664 578899988
Q ss_pred CeEEEEcccCCCCCCccCCCccEEecccccCCCCCCCcccEEEEecCCCCCcccccCCCcccccCCceEEEEeeCCCCce
Q 039705 230 NEILHVFPILRGGSRNYPASATSALLPIKLQDPNSNAIRAEVLICGGAKPEAGVLAGKGEFMNALQDCGRIEITNKSATW 309 (539)
Q Consensus 230 n~W~~~~p~mp~~~r~yp~~g~av~lpl~~~~~~~~~~~g~Iyv~GG~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W 309 (539)
++-...+ .+ .. +....+... .+++++++|+.+. .+..+|+.. .+-
T Consensus 551 ~~~~~~~---~~-h~-----~~v~~v~~s--------pdg~~l~sg~~Dg----------------~i~iwd~~~--~~~ 595 (694)
T 3dm0_A 551 CKLRSTL---AG-HT-----GYVSTVAVS--------PDGSLCASGGKDG----------------VVLLWDLAE--GKK 595 (694)
T ss_dssp CCEEEEE---CC-CS-----SCEEEEEEC--------TTSSEEEEEETTS----------------BCEEEETTT--TEE
T ss_pred CcEEEEE---cC-CC-----CCEEEEEEe--------CCCCEEEEEeCCC----------------eEEEEECCC--Cce
Confidence 7654322 22 11 111111111 1678888888652 345566542 111
Q ss_pred eeeccCCCceeceeEEecCCcEEEEcCcCCCCCCcccCCCCCCccEEEcCCCCCCCceE-ecCC----------------
Q 039705 310 QREMMPSPRVMGEMLLLPTGDVLIINGAKKGTAGWNFATDPNTTPVLYEPDDPINERFS-ELTP---------------- 372 (539)
Q Consensus 310 ~~~~M~~~R~~~~~vvlpdG~I~vvGG~~~g~~g~~~~~~~~~~~e~YdP~t~~g~~Wt-~~a~---------------- 372 (539)
.. .+.....-.+....||+.+++.+... .+.+||.++. +-. .+..
T Consensus 596 ~~-~~~~~~~v~~~~~sp~~~~l~~~~~~--------------~i~iwd~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 657 (694)
T 3dm0_A 596 LY-SLEANSVIHALCFSPNRYWLCAATEH--------------GIKIWDLESK---SIVEDLKVDLKAEAEKADNSGPAA 657 (694)
T ss_dssp EE-CCBCSSCEEEEEECSSSSEEEEEETT--------------EEEEEETTTT---EEEEEECCCCC-------------
T ss_pred EE-EecCCCcEEEEEEcCCCcEEEEEcCC--------------CEEEEECCCC---CChhhhcccccccccccccccccc
Confidence 11 22111122334456888877765322 3678888766 322 1110
Q ss_pred CCCCccceeeEeeCCCCeEEEecCCCC
Q 039705 373 TSKPRMCHSTSVVLPDGKILVAGSNPH 399 (539)
Q Consensus 373 ~~~~R~yhs~a~llpdG~V~v~GG~~~ 399 (539)
......+.......|||+.+++||.+.
T Consensus 658 ~~~~~~~~~~l~~spdg~~l~sgs~Dg 684 (694)
T 3dm0_A 658 TKRKVIYCTSLNWSADGSTLFSGYTDG 684 (694)
T ss_dssp ---CCCCEEEEEECTTSSEEEEEETTS
T ss_pred CCceeEEeeeEEEcCCCCEEEEEcCCC
Confidence 000111223345679999999999743
No 75
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=97.06 E-value=0.085 Score=51.38 Aligned_cols=206 Identities=13% Similarity=0.226 Sum_probs=103.2
Q ss_pred CCcEEEecCCCCCCCeEEEEeCCCCccceeecccccccc-cccceeEEccC--CcEEEEcCccCCeEEEE-ecCCCccee
Q 039705 111 NGTIVISGGWSSRGRSVRYLSGCYHACYWKEHHWELSAK-RWFSTQHILPD--GSFIVVGGRREFSYEYI-LKEGKRIIY 186 (539)
Q Consensus 111 dG~l~v~GG~~~g~~~v~~ydP~~~t~~W~~~~~~m~~~-R~y~s~~~L~d--G~VyvvGG~~~~~~E~y-P~~~~~~w~ 186 (539)
+|+++++|+.+ ..+++||.. +.+|..+.. +... ..-.+++..++ |+++++|+.+ .++.+| ..+. ..+.
T Consensus 66 ~g~~l~s~s~D---~~v~iWd~~--~~~~~~~~~-~~~h~~~v~~v~~~p~~~g~~l~s~s~d-~~v~~wd~~~~-~~~~ 137 (297)
T 2pm7_B 66 FGTILASCSYD---GKVMIWKEE--NGRWSQIAV-HAVHSASVNSVQWAPHEYGPMLLVASSD-GKVSVVEFKEN-GTTS 137 (297)
T ss_dssp GCSEEEEEETT---TEEEEEEBS--SSCBCCCEE-ECCCSSCEEEEEECCGGGCSEEEEEETT-SEEEEEEBCSS-SCBC
T ss_pred cCCEEEEEcCC---CEEEEEEcC--CCceEEEEE-eecCCCceeEEEeCcCCCCcEEEEEECC-CcEEEEEecCC-Ccee
Confidence 48899999863 689999987 666655432 3211 11122333344 7888888765 356666 4332 1111
Q ss_pred eccCccccCCCCCCCCcceEEEee-------------CCcEEEEEcC--ceeEeeCCCCe--EEEEcccCCCCCCccCCC
Q 039705 187 DLPILNETTNPSENNLYPFVFLST-------------DGNLFIFAND--RSILLNPETNE--ILHVFPILRGGSRNYPAS 249 (539)
Q Consensus 187 ~~~~l~~~~~~~~~~~yp~~~~~~-------------~G~Iyv~Gg~--~~e~yDp~tn~--W~~~~p~mp~~~r~yp~~ 249 (539)
.. .+..... ... .....+ ++++++.|+. .+.+||..+++ +. ....+.+ .... -
T Consensus 138 ~~-~~~~h~~----~v~-~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~-~~~~l~~-H~~~--V 207 (297)
T 2pm7_B 138 PI-IIDAHAI----GVN-SASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYV-LESTLEG-HSDW--V 207 (297)
T ss_dssp CE-EEECCSS----CEE-EEEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEE-EEEEECC-CSSC--E
T ss_pred ee-eeecccC----ccc-eEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEE-EEEEecC-CCCc--e
Confidence 00 0000000 000 001112 3678888875 47788876543 43 2223332 1110 0
Q ss_pred ccEEecccccCCCCCCCcccEEEEecCCCCCcccccCCCcccccCCceEEEEeeCCCCceeeecc---CCCceeceeEEe
Q 039705 250 ATSALLPIKLQDPNSNAIRAEVLICGGAKPEAGVLAGKGEFMNALQDCGRIEITNKSATWQREMM---PSPRVMGEMLLL 326 (539)
Q Consensus 250 g~av~lpl~~~~~~~~~~~g~Iyv~GG~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~~M---~~~R~~~~~vvl 326 (539)
-....-| . ...+++++.|+.+ .++..+|+......|....+ .....-.....-
T Consensus 208 ~~v~~sp------~--~~~~~~las~s~D----------------~~v~iWd~~~~~~~~~~~~~~~~~~~~~v~~~~~s 263 (297)
T 2pm7_B 208 RDVAWSP------T--VLLRSYMASVSQD----------------RTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWS 263 (297)
T ss_dssp EEEEECC------C--CSSSEEEEEEETT----------------SCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEEC
T ss_pred EEEEECC------C--CCCceEEEEEECC----------------CcEEEEEeCCCCCccceeeeecccCCCcEEEEEEC
Confidence 1111211 0 0125888888865 14566777543345654322 111111222345
Q ss_pred cCCcEEEEcCcCCCCCCcccCCCCCCccEEEcCCCCCCCceEecCCC
Q 039705 327 PTGDVLIINGAKKGTAGWNFATDPNTTPVLYEPDDPINERFSELTPT 373 (539)
Q Consensus 327 pdG~I~vvGG~~~g~~g~~~~~~~~~~~e~YdP~t~~g~~Wt~~a~~ 373 (539)
|||++++.+|.+ + ++.+|+...+ ..|..+..+
T Consensus 264 ~~g~~las~~~D-~------------~v~lw~~~~~--g~w~~~~~~ 295 (297)
T 2pm7_B 264 LSGNVLALSGGD-N------------KVTLWKENLE--GKWEPAGEV 295 (297)
T ss_dssp SSSCCEEEEETT-S------------CEEEEEECTT--SCEEEC---
T ss_pred CCCCEEEEEcCC-C------------cEEEEEECCC--CcEEecccc
Confidence 899999999876 2 5789998754 279876544
No 76
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=97.06 E-value=0.027 Score=55.88 Aligned_cols=232 Identities=13% Similarity=0.185 Sum_probs=119.4
Q ss_pred EEEEECCCCCEEeCccC--CCcccccceecCC--CcEEEecCCCCCCCeEEEEeCCCCccceeecccccccc-cccceeE
Q 039705 82 AVEYDAESAAIRPLKIL--TDTWSSSGGLSAN--GTIVISGGWSSRGRSVRYLSGCYHACYWKEHHWELSAK-RWFSTQH 156 (539)
Q Consensus 82 ~~~yDp~t~~w~~l~~~--~~~~c~~~~~l~d--G~l~v~GG~~~g~~~v~~ydP~~~t~~W~~~~~~m~~~-R~y~s~~ 156 (539)
..+||...+++..+... +......-....+ +.++++|+.+ ..+++||.. +.+|..... +... ..-.+.+
T Consensus 35 i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~d---g~v~iwd~~--~~~~~~~~~-~~~~~~~v~~~~ 108 (379)
T 3jrp_A 35 IKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYD---GKVLIWKEE--NGRWSQIAV-HAVHSASVNSVQ 108 (379)
T ss_dssp EEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETT---SCEEEEEEE--TTEEEEEEE-ECCCSSCEEEEE
T ss_pred EEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccC---CEEEEEEcC--CCceeEeee-ecCCCcceEEEE
Confidence 55677765555544322 2111111222344 8999998863 578999987 777765543 3322 2223344
Q ss_pred EccC--CcEEEEcCccCCeEEEE-ecCCCcceeeccCccccCCCCCCCCcceEEEee-------------CCcEEEEEcC
Q 039705 157 ILPD--GSFIVVGGRREFSYEYI-LKEGKRIIYDLPILNETTNPSENNLYPFVFLST-------------DGNLFIFAND 220 (539)
Q Consensus 157 ~L~d--G~VyvvGG~~~~~~E~y-P~~~~~~w~~~~~l~~~~~~~~~~~yp~~~~~~-------------~G~Iyv~Gg~ 220 (539)
..++ ++.+++|+.++ .+.+| .... ....... +..... ... .....+ ++++++.|+.
T Consensus 109 ~~~~~~~~~l~~~~~d~-~i~v~d~~~~-~~~~~~~-~~~~~~----~v~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 180 (379)
T 3jrp_A 109 WAPHEYGPLLLVASSDG-KVSVVEFKEN-GTTSPII-IDAHAI----GVN-SASWAPATIEEDGEHNGTKESRKFVTGGA 180 (379)
T ss_dssp ECCGGGCSEEEEEETTS-EEEEEECCTT-SCCCEEE-EECCTT----CEE-EEEECCCC----------CTTCEEEEEET
T ss_pred eCCCCCCCEEEEecCCC-cEEEEecCCC-CceeeEE-ecCCCC----ceE-EEEEcCccccccccccCCCCCCEEEEEeC
Confidence 4556 88888888764 45566 3322 0111110 000000 000 111223 6888888875
Q ss_pred --ceeEeeCCCCe--EEEEcccCCCCCCccCCCccEEecccccCCCCCCCcc---cEEEEecCCCCCcccccCCCccccc
Q 039705 221 --RSILLNPETNE--ILHVFPILRGGSRNYPASATSALLPIKLQDPNSNAIR---AEVLICGGAKPEAGVLAGKGEFMNA 293 (539)
Q Consensus 221 --~~e~yDp~tn~--W~~~~p~mp~~~r~yp~~g~av~lpl~~~~~~~~~~~---g~Iyv~GG~~~~~~~~~~~~~~~~a 293 (539)
.+.+||.+++. +. ....+.. .... --....-| + ++++++|+.+.
T Consensus 181 dg~i~i~d~~~~~~~~~-~~~~~~~-h~~~--v~~~~~sp-----------~~~~~~~l~s~~~dg-------------- 231 (379)
T 3jrp_A 181 DNLVKIWKYNSDAQTYV-LESTLEG-HSDW--VRDVAWSP-----------TVLLRSYLASVSQDR-------------- 231 (379)
T ss_dssp TSCEEEEEEETTTTEEE-EEEEECC-CSSC--EEEEEECC-----------CCSSSEEEEEEETTS--------------
T ss_pred CCeEEEEEecCCCccee-eEEEEec-ccCc--EeEEEECC-----------CCCCCCeEEEEeCCC--------------
Confidence 47788876543 33 2222222 1110 00112211 4 78899988651
Q ss_pred CCceEEEEeeCCCCceeee--cc-CCCceeceeEEecCCcEEEEcCcCCCCCCcccCCCCCCccEEEcCCCCCCCceEec
Q 039705 294 LQDCGRIEITNKSATWQRE--MM-PSPRVMGEMLLLPTGDVLIINGAKKGTAGWNFATDPNTTPVLYEPDDPINERFSEL 370 (539)
Q Consensus 294 ~~s~~~~d~~~~~~~W~~~--~M-~~~R~~~~~vvlpdG~I~vvGG~~~g~~g~~~~~~~~~~~e~YdP~t~~g~~Wt~~ 370 (539)
.+..+|+......+... .. .....-......|||+.+++++.+ | .+.+||..+. .+|..+
T Consensus 232 --~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d-g------------~i~iw~~~~~--~~~~~~ 294 (379)
T 3jrp_A 232 --TCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGD-N------------KVTLWKENLE--GKWEPA 294 (379)
T ss_dssp --CEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEESS-S------------SEEEEEEEET--TEEEEE
T ss_pred --EEEEEeCCCCCccceeeeeccccCCCcEEEEEEcCCCCEEEEecCC-C------------cEEEEeCCCC--Cccccc
Confidence 35678876433333332 21 122222233456899999988865 2 5788988753 278776
Q ss_pred CCC
Q 039705 371 TPT 373 (539)
Q Consensus 371 a~~ 373 (539)
...
T Consensus 295 ~~~ 297 (379)
T 3jrp_A 295 GEV 297 (379)
T ss_dssp EEE
T ss_pred cce
Confidence 443
No 77
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=97.05 E-value=0.048 Score=56.03 Aligned_cols=133 Identities=12% Similarity=0.019 Sum_probs=72.6
Q ss_pred eEEEEECCCCCEEeCccCC--CcccccceecCCCcEEEecCCCCCCCeEEEEeCCCCccceeecccccccccccceeEEc
Q 039705 81 LAVEYDAESAAIRPLKILT--DTWSSSGGLSANGTIVISGGWSSRGRSVRYLSGCYHACYWKEHHWELSAKRWFSTQHIL 158 (539)
Q Consensus 81 ~~~~yDp~t~~w~~l~~~~--~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydP~~~t~~W~~~~~~m~~~R~y~s~~~L 158 (539)
.+.+||..+++...+-..+ ...-..-+..+||+.+++|+.+ ..+++||.. +.+-.. . +........+..
T Consensus 126 tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~D---g~v~iWd~~--~~~~~~--~-~~~h~~~v~~~s- 196 (420)
T 4gga_A 126 SVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSS---AEVQLWDVQ--QQKRLR--N-MTSHSARVGSLS- 196 (420)
T ss_dssp EEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETT---SCEEEEETT--TTEEEE--E-ECCCSSCEEEEE-
T ss_pred EEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECC---CeEEEEEcC--CCcEEE--E-EeCCCCceEEEe-
Confidence 4778999999877654332 2222233456899999999863 578999987 543221 1 222222222333
Q ss_pred cCCcEEEEcCccCCeEEEE-ecCCCcceeeccCccccCCCCCCCCcceEEEeeCCcEEEEEcCc--eeEeeCCCCe
Q 039705 159 PDGSFIVVGGRREFSYEYI-LKEGKRIIYDLPILNETTNPSENNLYPFVFLSTDGNLFIFANDR--SILLNPETNE 231 (539)
Q Consensus 159 ~dG~VyvvGG~~~~~~E~y-P~~~~~~w~~~~~l~~~~~~~~~~~yp~~~~~~~G~Iyv~Gg~~--~e~yDp~tn~ 231 (539)
.|+++++.|+.+. .+.++ .... ... ...+..... .--.....++|+.++.++.+ +.+||..+++
T Consensus 197 ~~~~~l~sgs~d~-~i~~~d~~~~--~~~-~~~~~~h~~-----~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~ 263 (420)
T 4gga_A 197 WNSYILSSGSRSG-HIHHHDVRVA--EHH-VATLSGHSQ-----EVCGLRWAPDGRHLASGGNDNLVNVWPSAPGE 263 (420)
T ss_dssp EETTEEEEEETTS-EEEEEETTSS--SCE-EEEEECCSS-----CEEEEEECTTSSEEEEEETTSCEEEEESSCCS
T ss_pred eCCCEEEEEeCCC-ceeEeeeccc--cee-eEEeccccc-----ceeeeeecCCCCeeeeeeccccceEEeecccc
Confidence 3788888887764 33444 2221 111 111111110 01122345688888888754 6678876653
No 78
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=97.04 E-value=0.1 Score=58.09 Aligned_cols=218 Identities=11% Similarity=0.078 Sum_probs=113.2
Q ss_pred eEEEEECCCCCEEeCccCCCcccccceecCCCcEEEecCCCCCCCeEEEEeCCCCccceeecccccccc-cccceeEEcc
Q 039705 81 LAVEYDAESAAIRPLKILTDTWSSSGGLSANGTIVISGGWSSRGRSVRYLSGCYHACYWKEHHWELSAK-RWFSTQHILP 159 (539)
Q Consensus 81 ~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydP~~~t~~W~~~~~~m~~~-R~y~s~~~L~ 159 (539)
...+||..+++....-..+..........+||+.+++|+.. ..+.+||.. +.+.... +... ..-.+.+.-+
T Consensus 36 ~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d---g~i~vw~~~--~~~~~~~---~~~~~~~v~~~~~s~ 107 (814)
T 3mkq_A 36 RVEIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDD---FRIRVFNYN--TGEKVVD---FEAHPDYIRSIAVHP 107 (814)
T ss_dssp EEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETT---SEEEEEETT--TCCEEEE---EECCSSCEEEEEECS
T ss_pred EEEEEECCCCceEEEEecCCCcEEEEEEeCCCCEEEEEeCC---CeEEEEECC--CCcEEEE---EecCCCCEEEEEEeC
Confidence 35678887765543322333333344566799999999863 678999987 5544321 2211 1122344556
Q ss_pred CCcEEEEcCccCCeEEEE-ecCCCcceeeccCccccCCCCCCCCcce-EEEee-CCcEEEEEcC--ceeEeeCCCCeEEE
Q 039705 160 DGSFIVVGGRREFSYEYI-LKEGKRIIYDLPILNETTNPSENNLYPF-VFLST-DGNLFIFAND--RSILLNPETNEILH 234 (539)
Q Consensus 160 dG~VyvvGG~~~~~~E~y-P~~~~~~w~~~~~l~~~~~~~~~~~yp~-~~~~~-~G~Iyv~Gg~--~~e~yDp~tn~W~~ 234 (539)
||+.+++|+.+ .++.+| ..++ +.....+..... ... +...+ +|+++++|+. .+.+||..+.+-..
T Consensus 108 ~~~~l~~~~~d-g~i~vw~~~~~---~~~~~~~~~~~~------~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~ 177 (814)
T 3mkq_A 108 TKPYVLSGSDD-LTVKLWNWENN---WALEQTFEGHEH------FVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNF 177 (814)
T ss_dssp SSSEEEEEETT-SEEEEEEGGGT---SEEEEEEECCSS------CEEEEEEETTEEEEEEEEETTSEEEEEETTCSSCSE
T ss_pred CCCEEEEEcCC-CEEEEEECCCC---ceEEEEEcCCCC------cEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCccee
Confidence 88888887765 456677 4332 221111111110 111 12235 7888888874 47789986654221
Q ss_pred EcccCCCCCCccCCCccEEecccccCCCCCCCcccEEEEecCCCCCcccccCCCcccccCCceEEEEeeCCCCceeee-c
Q 039705 235 VFPILRGGSRNYPASATSALLPIKLQDPNSNAIRAEVLICGGAKPEAGVLAGKGEFMNALQDCGRIEITNKSATWQRE-M 313 (539)
Q Consensus 235 ~~p~mp~~~r~yp~~g~av~lpl~~~~~~~~~~~g~Iyv~GG~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~-~ 313 (539)
.+..-. ... .......|. .+++.+++|+.+. .+..+|... .+-... .
T Consensus 178 ~~~~~~--~~~---v~~~~~~~~---------~~~~~l~~~~~dg----------------~i~~~d~~~--~~~~~~~~ 225 (814)
T 3mkq_A 178 TLTTGQ--ERG---VNYVDYYPL---------PDKPYMITASDDL----------------TIKIWDYQT--KSCVATLE 225 (814)
T ss_dssp EEECCC--TTC---CCEEEECCS---------TTCCEEEEECTTS----------------EEEEEETTT--TEEEEEEE
T ss_pred EEecCC--CCC---EEEEEEEEC---------CCCCEEEEEeCCC----------------EEEEEECCC--CcEEEEEc
Confidence 121111 011 012222221 1577888887651 345566532 221111 1
Q ss_pred cCCCceeceeEEecCCcEEEEcCcCCCCCCcccCCCCCCccEEEcCCCC
Q 039705 314 MPSPRVMGEMLLLPTGDVLIINGAKKGTAGWNFATDPNTTPVLYEPDDP 362 (539)
Q Consensus 314 M~~~R~~~~~vvlpdG~I~vvGG~~~g~~g~~~~~~~~~~~e~YdP~t~ 362 (539)
-+.... ......|+|+++++|+.+ | ++.+||..+.
T Consensus 226 ~~~~~v-~~~~~~~~~~~l~~~~~d-g------------~v~vwd~~~~ 260 (814)
T 3mkq_A 226 GHMSNV-SFAVFHPTLPIIISGSED-G------------TLKIWNSSTY 260 (814)
T ss_dssp CCSSCE-EEEEECSSSSEEEEEETT-S------------CEEEEETTTC
T ss_pred CCCCCE-EEEEEcCCCCEEEEEeCC-C------------eEEEEECCCC
Confidence 122222 233567899999998865 2 4678887765
No 79
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=97.03 E-value=0.0098 Score=59.67 Aligned_cols=137 Identities=9% Similarity=0.083 Sum_probs=69.9
Q ss_pred EEEEECCCCCEEeCccCC--CcccccceecCCCcEEEecCCCCCCCeEEEEeCCCCccc-eeecccccc-cccccceeEE
Q 039705 82 AVEYDAESAAIRPLKILT--DTWSSSGGLSANGTIVISGGWSSRGRSVRYLSGCYHACY-WKEHHWELS-AKRWFSTQHI 157 (539)
Q Consensus 82 ~~~yDp~t~~w~~l~~~~--~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydP~~~t~~-W~~~~~~m~-~~R~y~s~~~ 157 (539)
..+||..++.|+.+.... ..........++|+++++|+.+ ..+++||.. +.. |..... +. ....-.+.+.
T Consensus 35 i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d---~~v~vwd~~--~~~~~~~~~~-~~~~~~~v~~~~~ 108 (377)
T 3dwl_C 35 VELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQD---RNAYVYEKR--PDGTWKQTLV-LLRLNRAATFVRW 108 (377)
T ss_dssp BCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETT---SSEEEC--------CCCCEEE-CCCCSSCEEEEEC
T ss_pred EEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCC---CeEEEEEcC--CCCceeeeeE-ecccCCceEEEEE
Confidence 447888888777665442 2222233456789999998863 568999987 554 543322 22 1222223444
Q ss_pred ccCCcEEEEcCccCCeEEEE-ecCCCcceeeccCccccCCCCCCCCcceEEEeeCCcEEEEEcC--ceeEeeCCCC
Q 039705 158 LPDGSFIVVGGRREFSYEYI-LKEGKRIIYDLPILNETTNPSENNLYPFVFLSTDGNLFIFAND--RSILLNPETN 230 (539)
Q Consensus 158 L~dG~VyvvGG~~~~~~E~y-P~~~~~~w~~~~~l~~~~~~~~~~~yp~~~~~~~G~Iyv~Gg~--~~e~yDp~tn 230 (539)
.+||+.+++|+.++ .+.+| ..+. ..|.....+..... .. --.....++|++++.|+. .+.+||..+.
T Consensus 109 ~~~~~~l~~~~~d~-~i~iwd~~~~-~~~~~~~~~~~~h~---~~-v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~ 178 (377)
T 3dwl_C 109 SPNEDKFAVGSGAR-VISVCYFEQE-NDWWVSKHLKRPLR---ST-ILSLDWHPNNVLLAAGCADRKAYVLSAYVR 178 (377)
T ss_dssp CTTSSCCEEEESSS-CEEECCC------CCCCEEECSSCC---SC-EEEEEECTTSSEEEEEESSSCEEEEEECCS
T ss_pred CCCCCEEEEEecCC-eEEEEEECCc-ccceeeeEeecccC---CC-eEEEEEcCCCCEEEEEeCCCEEEEEEEEec
Confidence 56889888888754 45565 3332 12321111111000 00 011233468999988875 4778887643
No 80
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=97.01 E-value=0.072 Score=56.78 Aligned_cols=251 Identities=11% Similarity=0.009 Sum_probs=123.7
Q ss_pred EEEEECCCC----C-EEeCccCCCcc-cccceecC--CCcEEEecCCCCCCCeEEEEeCCCCcc------ceeecccccc
Q 039705 82 AVEYDAESA----A-IRPLKILTDTW-SSSGGLSA--NGTIVISGGWSSRGRSVRYLSGCYHAC------YWKEHHWELS 147 (539)
Q Consensus 82 ~~~yDp~t~----~-w~~l~~~~~~~-c~~~~~l~--dG~l~v~GG~~~g~~~v~~ydP~~~t~------~W~~~~~~m~ 147 (539)
..+||..+. + ...+. .+... -...+..+ ||+++++|+.. ..+++||.. +. ....... +.
T Consensus 41 v~v~~~~~~~~~~~~~~~~~-~h~~~~v~~~~~sp~~~~~~l~s~~~d---g~v~vw~~~--~~~~~~~~~~~~~~~-~~ 113 (615)
T 1pgu_A 41 AFVRCLDDGDSKVPPVVQFT-GHGSSVVTTVKFSPIKGSQYLCSGDES---GKVIVWGWT--FDKESNSVEVNVKSE-FQ 113 (615)
T ss_dssp EEEEECCSSCCSSCSEEEEC-TTTTSCEEEEEECSSTTCCEEEEEETT---SEEEEEEEE--EEGGGTEEEEEEEEE-EE
T ss_pred EEEEECCCCCCccccceEEe-cCCCceEEEEEECcCCCCCEEEEecCC---CEEEEEeCC--CCcccccccccccch-hh
Confidence 557887765 2 22222 22211 12234567 99999999863 578899875 33 2222222 22
Q ss_pred -cccccceeEEccCCcEEEEcCccCC-eEEEE-ecCCCcceeeccCccccCCCCCCCCcceEEEeeCCc-EEEEEcC--c
Q 039705 148 -AKRWFSTQHILPDGSFIVVGGRREF-SYEYI-LKEGKRIIYDLPILNETTNPSENNLYPFVFLSTDGN-LFIFAND--R 221 (539)
Q Consensus 148 -~~R~y~s~~~L~dG~VyvvGG~~~~-~~E~y-P~~~~~~w~~~~~l~~~~~~~~~~~yp~~~~~~~G~-Iyv~Gg~--~ 221 (539)
....-.+.+.-+||+.+++++.+.. ...++ -... +.. ..+....+ . -..+...++|+ +++.|+. .
T Consensus 114 ~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d~~--~~~--~~~~~~~~----~-v~~~~~~~~~~~~l~~~~~d~~ 184 (615)
T 1pgu_A 114 VLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWDSG--NSL--GEVSGHSQ----R-INACHLKQSRPMRSMTVGDDGS 184 (615)
T ss_dssp CCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETTTC--CEE--EECCSCSS----C-EEEEEECSSSSCEEEEEETTTE
T ss_pred cccccEEEEEEeCCCCEEEEeccCCCCccEEEEEECC--Ccc--eeeecCCc----c-EEEEEECCCCCcEEEEEeCCCc
Confidence 1222334556678999998886531 12233 1111 111 00111100 0 11223346776 7777764 4
Q ss_pred eeEeeCCCCeEEEEcccCCCCCC-ccCCCccEEecccccCCCCCCCcc-cEEEEecCCCCCcccccCCCcccccCCceEE
Q 039705 222 SILLNPETNEILHVFPILRGGSR-NYPASATSALLPIKLQDPNSNAIR-AEVLICGGAKPEAGVLAGKGEFMNALQDCGR 299 (539)
Q Consensus 222 ~e~yDp~tn~W~~~~p~mp~~~r-~yp~~g~av~lpl~~~~~~~~~~~-g~Iyv~GG~~~~~~~~~~~~~~~~a~~s~~~ 299 (539)
+.+||..+.+-...+ ..... ..+ --.....| + ++.+++|+.+. .+..
T Consensus 185 v~vwd~~~~~~~~~~---~~~~~~~~~-v~~~~~~~-----------~~~~~l~~~~~dg----------------~i~v 233 (615)
T 1pgu_A 185 VVFYQGPPFKFSASD---RTHHKQGSF-VRDVEFSP-----------DSGEFVITVGSDR----------------KISC 233 (615)
T ss_dssp EEEEETTTBEEEEEE---CSSSCTTCC-EEEEEECS-----------TTCCEEEEEETTC----------------CEEE
T ss_pred EEEEeCCCcceeeee---cccCCCCce-EEEEEECC-----------CCCCEEEEEeCCC----------------eEEE
Confidence 788998877654333 22111 000 01112211 5 78888887651 3556
Q ss_pred EEeeCCCCceeee--c---cCCCceeceeEEecCCcEEEEcCcCCCCCCcccCCCCCCccEEEcCCCCCCCceEe-cCCC
Q 039705 300 IEITNKSATWQRE--M---MPSPRVMGEMLLLPTGDVLIINGAKKGTAGWNFATDPNTTPVLYEPDDPINERFSE-LTPT 373 (539)
Q Consensus 300 ~d~~~~~~~W~~~--~---M~~~R~~~~~vvlpdG~I~vvGG~~~g~~g~~~~~~~~~~~e~YdP~t~~g~~Wt~-~a~~ 373 (539)
+|+.. .+.... . -...... +.... +++.+++++.+ + ++.+||..+. +-.. +...
T Consensus 234 wd~~~--~~~~~~~~~~~~~~~~~v~-~~~~~-~~~~l~~~~~d-~------------~i~~wd~~~~---~~~~~~~~~ 293 (615)
T 1pgu_A 234 FDGKS--GEFLKYIEDDQEPVQGGIF-ALSWL-DSQKFATVGAD-A------------TIRVWDVTTS---KCVQKWTLD 293 (615)
T ss_dssp EETTT--CCEEEECCBTTBCCCSCEE-EEEES-SSSEEEEEETT-S------------EEEEEETTTT---EEEEEEECC
T ss_pred EECCC--CCEeEEecccccccCCceE-EEEEc-CCCEEEEEcCC-C------------cEEEEECCCC---cEEEEEcCC
Confidence 77642 221111 1 1222222 22334 99999998865 2 5789999876 4322 1111
Q ss_pred CCCccceeeEeeCCCCeEEEecCCCC
Q 039705 374 SKPRMCHSTSVVLPDGKILVAGSNPH 399 (539)
Q Consensus 374 ~~~R~yhs~a~llpdG~V~v~GG~~~ 399 (539)
..+......++..++++.+++|+...
T Consensus 294 ~~~~~~~~~~~~~~~~~~l~~~~~~g 319 (615)
T 1pgu_A 294 KQQLGNQQVGVVATGNGRIISLSLDG 319 (615)
T ss_dssp TTCGGGCEEEEEEEETTEEEEEETTS
T ss_pred CCcccCceeEEEeCCCCeEEEEECCC
Confidence 11111122334445888888888654
No 81
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=97.01 E-value=0.19 Score=50.08 Aligned_cols=141 Identities=11% Similarity=0.137 Sum_probs=64.1
Q ss_pred EEECCCCCEEeCccCC-CcccccceecCCCcEEEecCCCCCCCeEEEEeCCCCccceeeccccccc-----------ccc
Q 039705 84 EYDAESAAIRPLKILT-DTWSSSGGLSANGTIVISGGWSSRGRSVRYLSGCYHACYWKEHHWELSA-----------KRW 151 (539)
Q Consensus 84 ~yDp~t~~w~~l~~~~-~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydP~~~t~~W~~~~~~m~~-----------~R~ 151 (539)
.+|..+++.+.+.... .......... ||+.+++.... ...+.+|+... ............. ...
T Consensus 81 ~~~~~~g~~~~~~~~~~~~~~p~~~~~-dg~~l~~~~~~--~~~v~~~~~~~-~g~~~~~~~~~~~~g~~~~~~~~~~~~ 156 (361)
T 3scy_A 81 AFDKEKGTLHLLNTQKTMGADPCYLTT-NGKNIVTANYS--GGSITVFPIGQ-DGALLPASDVIEFKGSGPDKERQTMPH 156 (361)
T ss_dssp EEETTTTEEEEEEEEECSSSCEEEEEE-CSSEEEEEETT--TTEEEEEEBCT-TSCBCSCSEEEECCCCCSCTTTCSSCC
T ss_pred EEeCCCCcEEEeeEeccCCCCcEEEEE-CCCEEEEEECC--CCEEEEEEeCC-CCcCcccceeEEccCCCCCccccCCCc
Confidence 3456667776654322 1111122233 77755555432 35788888651 1111111100000 001
Q ss_pred cceeEEccCCcEEEEcCccCCeEEEE-ecCCCc----c-eeec---cCccccCCCCCCCCcce-EEEeeCCc-EEEEE--
Q 039705 152 FSTQHILPDGSFIVVGGRREFSYEYI-LKEGKR----I-IYDL---PILNETTNPSENNLYPF-VFLSTDGN-LFIFA-- 218 (539)
Q Consensus 152 y~s~~~L~dG~VyvvGG~~~~~~E~y-P~~~~~----~-w~~~---~~l~~~~~~~~~~~yp~-~~~~~~G~-Iyv~G-- 218 (539)
-++++.-+||+.+++.+.....+.+| ...... + .... ...... ....|. ....+||+ ||+..
T Consensus 157 ~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~spdg~~l~v~~~~ 231 (361)
T 3scy_A 157 LHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVA-----PGSGPRHLIFNSDGKFAYLINEI 231 (361)
T ss_dssp EEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECC-----TTCCEEEEEECTTSSEEEEEETT
T ss_pred ceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceecC-----CCCCCeEEEEcCCCCEEEEEcCC
Confidence 13456677998444444434566777 333211 0 1000 000000 011233 34457997 66665
Q ss_pred cCceeEeeCCCCeEE
Q 039705 219 NDRSILLNPETNEIL 233 (539)
Q Consensus 219 g~~~e~yDp~tn~W~ 233 (539)
+..+.+||..+++..
T Consensus 232 ~~~v~v~~~~~g~~~ 246 (361)
T 3scy_A 232 GGTVIAFRYADGMLD 246 (361)
T ss_dssp TCEEEEEEEETTEEE
T ss_pred CCeEEEEEecCCceE
Confidence 245788998877664
No 82
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=96.98 E-value=0.27 Score=46.83 Aligned_cols=131 Identities=15% Similarity=0.116 Sum_probs=67.1
Q ss_pred EEEEECCCCCEEeCccC-CCcccccceecCCCcEEEecCCCCCCCeEEEEeCCCCccceeecccccc-cccccceeEEcc
Q 039705 82 AVEYDAESAAIRPLKIL-TDTWSSSGGLSANGTIVISGGWSSRGRSVRYLSGCYHACYWKEHHWELS-AKRWFSTQHILP 159 (539)
Q Consensus 82 ~~~yDp~t~~w~~l~~~-~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydP~~~t~~W~~~~~~m~-~~R~y~s~~~L~ 159 (539)
...||+. ++++.+... ......+-+...+|++++.... ...+.+||+. .+..... +. ....-.+.+.-.
T Consensus 80 i~~~~~~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~---~~~i~~~d~~---g~~~~~~--~~~~~~~~~~i~~~~ 150 (299)
T 2z2n_A 80 IGRITKK-GIIKEYTLPNPDSAPYGITEGPNGDIWFTEMN---GNRIGRITDD---GKIREYE--LPNKGSYPSFITLGS 150 (299)
T ss_dssp EEEECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEETT---TTEEEEECTT---CCEEEEE--CSSTTCCEEEEEECT
T ss_pred EEEECCC-CcEEEEeCCCcCCCceeeEECCCCCEEEEecC---CceEEEECCC---CCEEEec--CCCCCCCCceEEEcC
Confidence 4456765 445443321 1112222334468999997643 2568889984 2233221 11 112222344455
Q ss_pred CCcEEEEcCccCCeEEEE-ecCCCcceeeccCccccCCCCCCCCcceEEEe-eCCcEEEEE--cCceeEeeCCCCeEE
Q 039705 160 DGSFIVVGGRREFSYEYI-LKEGKRIIYDLPILNETTNPSENNLYPFVFLS-TDGNLFIFA--NDRSILLNPETNEIL 233 (539)
Q Consensus 160 dG~VyvvGG~~~~~~E~y-P~~~~~~w~~~~~l~~~~~~~~~~~yp~~~~~-~~G~Iyv~G--g~~~e~yDp~tn~W~ 233 (539)
+|++|+..-. ...+.+| + ++ +....... .. ...|...+. ++|+||+.. +..+.+||+ ++++.
T Consensus 151 ~g~l~v~~~~-~~~i~~~~~-~g--~~~~~~~~-~~------~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~ 216 (299)
T 2z2n_A 151 DNALWFTENQ-NNAIGRITE-SG--DITEFKIP-TP------ASGPVGITKGNDDALWFVEIIGNKIGRITT-SGEIT 216 (299)
T ss_dssp TSCEEEEETT-TTEEEEECT-TC--CEEEEECS-ST------TCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEE
T ss_pred CCCEEEEeCC-CCEEEEEcC-CC--cEEEeeCC-CC------CCcceeEEECCCCCEEEEccCCceEEEECC-CCcEE
Confidence 7899986532 2345566 5 43 33221111 10 113444433 579999887 356889999 77765
No 83
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=96.95 E-value=0.2 Score=50.48 Aligned_cols=233 Identities=11% Similarity=0.090 Sum_probs=115.9
Q ss_pred cCCCcEEEecCCCC--------CCCeEEEEeCCCCccceeeccc-cc---ccccccc-eeEEccCCcEEEE-cCccCCeE
Q 039705 109 SANGTIVISGGWSS--------RGRSVRYLSGCYHACYWKEHHW-EL---SAKRWFS-TQHILPDGSFIVV-GGRREFSY 174 (539)
Q Consensus 109 l~dG~l~v~GG~~~--------g~~~v~~ydP~~~t~~W~~~~~-~m---~~~R~y~-s~~~L~dG~Vyvv-GG~~~~~~ 174 (539)
..++.++++|.... ....+++|+............. .. .....|. .++.-+||+.+++ +|....++
T Consensus 80 ~~~~~~~~~g~~~~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg~~la~as~~~d~~i 159 (365)
T 4h5i_A 80 DASKGIILVGCNENSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREGTVAAIASSKVPAIM 159 (365)
T ss_dssp EEETTEEEEECCCCHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTSSCEEEEESCSSCEE
T ss_pred EeCCCEEEEEECCCccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCCCEEEEEECCCCCEE
Confidence 45788888886531 1356788764310222211110 01 1111122 3445579988765 45555677
Q ss_pred EEE-ecCCCcceeeccCccccCCCCCCCCcceEEEeeCCcEEEEEcC-ceeEeeCCCCeEEEEcccCCCCCCccCCCccE
Q 039705 175 EYI-LKEGKRIIYDLPILNETTNPSENNLYPFVFLSTDGNLFIFAND-RSILLNPETNEILHVFPILRGGSRNYPASATS 252 (539)
Q Consensus 175 E~y-P~~~~~~w~~~~~l~~~~~~~~~~~yp~~~~~~~G~Iyv~Gg~-~~e~yDp~tn~W~~~~p~mp~~~r~yp~~g~a 252 (539)
.+| +.+. +.... +... . ..+ .+...+||++++.+.. ...+++..+++..... .... . ... -...
T Consensus 160 ~iwd~~~~--~~~~~--~~~~-~----~V~-~v~fspdg~~l~s~s~~~~~~~~~~~~~~~~~~-~~~~-~-~~~-v~~v 225 (365)
T 4h5i_A 160 RIIDPSDL--TEKFE--IETR-G----EVK-DLHFSTDGKVVAYITGSSLEVISTVTGSCIARK-TDFD-K-NWS-LSKI 225 (365)
T ss_dssp EEEETTTT--EEEEE--EECS-S----CCC-EEEECTTSSEEEEECSSCEEEEETTTCCEEEEE-CCCC-T-TEE-EEEE
T ss_pred EEeECCCC--cEEEE--eCCC-C----ceE-EEEEccCCceEEeccceeEEEEEeccCcceeee-ecCC-C-CCC-EEEE
Confidence 888 5543 32211 1111 1 111 2344589999988864 4677888777654211 1111 1 100 0112
Q ss_pred EecccccCCCCCCCcccEEEEecCCCCCcccccCCCcccccCCceEEEEeeCCCCceee--e-ccC--CCceeceeEEec
Q 039705 253 ALLPIKLQDPNSNAIRAEVLICGGAKPEAGVLAGKGEFMNALQDCGRIEITNKSATWQR--E-MMP--SPRVMGEMLLLP 327 (539)
Q Consensus 253 v~lpl~~~~~~~~~~~g~Iyv~GG~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~--~-~M~--~~R~~~~~vvlp 327 (539)
...| +++.++.++.+.+. ...+..+|... ..+.. . .+. ..... +...-|
T Consensus 226 ~fsp-----------dg~~l~~~s~d~~~------------~~~i~~~~~~~--~~~~~~~~~~~~~~~~~V~-~~~~Sp 279 (365)
T 4h5i_A 226 NFIA-----------DDTVLIAASLKKGK------------GIVLTKISIKS--GNTSVLRSKQVTNRFKGIT-SMDVDM 279 (365)
T ss_dssp EEEE-----------TTEEEEEEEESSSC------------CEEEEEEEEET--TEEEEEEEEEEESSCSCEE-EEEECT
T ss_pred EEcC-----------CCCEEEEEecCCcc------------eeEEeeccccc--ceecceeeeeecCCCCCeE-eEEECC
Confidence 2222 67888887654211 11233455432 22221 1 111 11121 234569
Q ss_pred CCcEEEEcCcCCCCCCcccCCCCCCccEEEcCCCCCCCce-EecCCCCCCccceeeEeeCCCCeEEEecCCCC
Q 039705 328 TGDVLIINGAKKGTAGWNFATDPNTTPVLYEPDDPINERF-SELTPTSKPRMCHSTSVVLPDGKILVAGSNPH 399 (539)
Q Consensus 328 dG~I~vvGG~~~g~~g~~~~~~~~~~~e~YdP~t~~g~~W-t~~a~~~~~R~yhs~a~llpdG~V~v~GG~~~ 399 (539)
||+++++|+.+. ++.+||.++. +- ..+-....... ....+.|||+.++.|+.++
T Consensus 280 dg~~lasgs~D~-------------~V~iwd~~~~---~~~~~~~~gH~~~V--~~v~fSpdg~~laS~S~D~ 334 (365)
T 4h5i_A 280 KGELAVLASNDN-------------SIALVKLKDL---SMSKIFKQAHSFAI--TEVTISPDSTYVASVSAAN 334 (365)
T ss_dssp TSCEEEEEETTS-------------CEEEEETTTT---EEEEEETTSSSSCE--EEEEECTTSCEEEEEETTS
T ss_pred CCCceEEEcCCC-------------EEEEEECCCC---cEEEEecCcccCCE--EEEEECCCCCEEEEEeCCC
Confidence 999999998762 6899998876 42 22211111121 2345689999999999643
No 84
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=96.94 E-value=0.085 Score=51.75 Aligned_cols=144 Identities=10% Similarity=0.108 Sum_probs=70.2
Q ss_pred eEEEEECCCCCEEeCccC-CCcccccceecCC---CcEEEecCCCCCCCeEEEEeCCCCccc--eeeccc---ccccccc
Q 039705 81 LAVEYDAESAAIRPLKIL-TDTWSSSGGLSAN---GTIVISGGWSSRGRSVRYLSGCYHACY--WKEHHW---ELSAKRW 151 (539)
Q Consensus 81 ~~~~yDp~t~~w~~l~~~-~~~~c~~~~~l~d---G~l~v~GG~~~g~~~v~~ydP~~~t~~--W~~~~~---~m~~~R~ 151 (539)
...+||..+++...+... +..........++ |.++++|+.. ..+.+||.. +.+ -..+.. ....-.|
T Consensus 45 ~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d---g~i~iwd~~--~~~~~~~~~~~~~~~v~~~~~ 119 (357)
T 3i2n_A 45 VIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGDFG---GNLHIWNLE--APEMPVYSVKGHKEIINAIDG 119 (357)
T ss_dssp EEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEETT---SCEEEECTT--SCSSCSEEECCCSSCEEEEEE
T ss_pred EEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEecCC---CeEEEEeCC--CCCccEEEEEecccceEEEee
Confidence 467888888876554322 2111222233455 7888988753 568899986 332 111110 0000011
Q ss_pred cceeEEccCCcEEEEcCccCCeEEEE-ecCCCcceeeccCccccCCCCCCCCcceEE---EeeCCcEEEEEcC--ceeEe
Q 039705 152 FSTQHILPDGSFIVVGGRREFSYEYI-LKEGKRIIYDLPILNETTNPSENNLYPFVF---LSTDGNLFIFAND--RSILL 225 (539)
Q Consensus 152 y~s~~~L~dG~VyvvGG~~~~~~E~y-P~~~~~~w~~~~~l~~~~~~~~~~~yp~~~---~~~~G~Iyv~Gg~--~~e~y 225 (539)
.+..+.-+|++.++.|+.++ .+.+| ..+.............. .....+...+ ..+++++++.|+. .+.+|
T Consensus 120 ~~~~~~s~~~~~l~~~~~d~-~i~vwd~~~~~~~~~~~~~~~~~---~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~ 195 (357)
T 3i2n_A 120 IGGLGIGEGAPEIVTGSRDG-TVKVWDPRQKDDPVANMEPVQGE---NKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLF 195 (357)
T ss_dssp ESGGGCC-CCCEEEEEETTS-CEEEECTTSCSSCSEEECCCTTS---CCCCEEEEEEECCCC-CCCEEEEEETTSEEEEE
T ss_pred ccccccCCCccEEEEEeCCC-eEEEEeCCCCCCcceeccccCCC---CCCceEEEEEEeccCCCCCEEEEEccCCeEEEE
Confidence 11111235788888887654 46677 44331011111111110 0001110111 1278999998875 47889
Q ss_pred eCCCCeEE
Q 039705 226 NPETNEIL 233 (539)
Q Consensus 226 Dp~tn~W~ 233 (539)
|.++.+-.
T Consensus 196 d~~~~~~~ 203 (357)
T 3i2n_A 196 DLRNMALR 203 (357)
T ss_dssp ETTTTEEE
T ss_pred ECccCcee
Confidence 99987754
No 85
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=96.90 E-value=0.39 Score=47.50 Aligned_cols=148 Identities=11% Similarity=0.023 Sum_probs=78.5
Q ss_pred eEEEEECCCCCEEeCccCCC-cccccceecCCCcEEEecCCCCCCCeEEEEeCCCCcc--ceeeccccc-----cccccc
Q 039705 81 LAVEYDAESAAIRPLKILTD-TWSSSGGLSANGTIVISGGWSSRGRSVRYLSGCYHAC--YWKEHHWEL-----SAKRWF 152 (539)
Q Consensus 81 ~~~~yDp~t~~w~~l~~~~~-~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydP~~~t~--~W~~~~~~m-----~~~R~y 152 (539)
...+||+.+++......... ....+-++..+|+||++... ...+..||+. .. .-..+.... ...-..
T Consensus 70 ~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g~l~v~d~~---~~~v~~~~~~--g~~~~~~~~~~~~~~g~~~~~~~~ 144 (329)
T 3fvz_A 70 TILVIDPNNAEILQSSGKNLFYLPHGLSIDTDGNYWVTDVA---LHQVFKLDPH--SKEGPLLILGRSMQPGSDQNHFCQ 144 (329)
T ss_dssp CEEEECTTTCCEEEEECTTTCSSEEEEEECTTSCEEEEETT---TTEEEEECTT--CSSCCSEEESBTTBCCCSTTCCSS
T ss_pred cEEEEECCCCeEEeccCCCccCCceEEEECCCCCEEEEECC---CCEEEEEeCC--CCeEEEEEecccCCCCCCccccCC
Confidence 47789999888754322111 12223345578999998753 3679999986 33 111111000 011112
Q ss_pred cee-EEcc-CCcEEEEcCccCCeEEEEecCCCccee-eccCccccCC--CCCCCCcceEEEe-eC-CcEEEEEc--Ccee
Q 039705 153 STQ-HILP-DGSFIVVGGRREFSYEYILKEGKRIIY-DLPILNETTN--PSENNLYPFVFLS-TD-GNLFIFAN--DRSI 223 (539)
Q Consensus 153 ~s~-~~L~-dG~VyvvGG~~~~~~E~yP~~~~~~w~-~~~~l~~~~~--~~~~~~yp~~~~~-~~-G~Iyv~Gg--~~~e 223 (539)
+.. ++-+ +|++||..+.....+.+|.... +.. ..... ...+ ....-.+|..+++ ++ |+||+... ..+.
T Consensus 145 P~~ia~~~~~g~lyv~d~~~~~~I~~~~~~g--~~~~~~~~~-g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~ 221 (329)
T 3fvz_A 145 PTDVAVEPSTGAVFVSDGYCNSRIVQFSPSG--KFVTQWGEE-SSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQ 221 (329)
T ss_dssp EEEEEECTTTCCEEEEECSSCCEEEEECTTS--CEEEEECEE-CCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEE
T ss_pred CcEEEEeCCCCeEEEEeCCCCCeEEEEcCCC--CEEEEeccC-CCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEE
Confidence 333 4444 7999999864345566663222 221 11100 0000 0001124665555 56 89999864 4588
Q ss_pred EeeCCCCeEEEEc
Q 039705 224 LLNPETNEILHVF 236 (539)
Q Consensus 224 ~yDp~tn~W~~~~ 236 (539)
+||+.+++..+.+
T Consensus 222 ~~~~~~G~~~~~~ 234 (329)
T 3fvz_A 222 CFKTDTKEFVREI 234 (329)
T ss_dssp EEETTTCCEEEEE
T ss_pred EEECCCCcEEEEE
Confidence 9999977766444
No 86
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=96.90 E-value=0.19 Score=53.32 Aligned_cols=241 Identities=14% Similarity=0.145 Sum_probs=120.8
Q ss_pred EEEEECCCCCEEeCccCCCcccccceecCCCcEEEecCCCCCCCeEEEEeCCCCccceeecccccccccccceeEEccCC
Q 039705 82 AVEYDAESAAIRPLKILTDTWSSSGGLSANGTIVISGGWSSRGRSVRYLSGCYHACYWKEHHWELSAKRWFSTQHILPDG 161 (539)
Q Consensus 82 ~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydP~~~t~~W~~~~~~m~~~R~y~s~~~L~dG 161 (539)
..+||......+.+.. +.......++.+||+.+++|+.. ..+++||.. ...-..+.. . ...-.+.+..+||
T Consensus 286 i~~w~~~~~~~~~~~~-h~~~v~~~~~~~~~~~l~t~~~d---~~i~~w~~~--~~~~~~~~~-~--~~~v~~~~~s~~g 356 (577)
T 2ymu_A 286 VKLWNRNGQLLQTLTG-HSSSVWGVAFSPDGQTIASASDD---KTVKLWNRN--GQHLQTLTG-H--SSSVWGVAFSPDG 356 (577)
T ss_dssp EEEEETTSCEEEEECC-CSSCEEEEEECTTSSEEEEEETT---SCEEEEETT--SCEEEEECC-C--SSCEEEEEECTTS
T ss_pred EEEEeCCCcEEEEEec-CCCCeEEEEECCCCCEEEEEeCC---CeEEEEeCC--CCeeEEEeC-C--CCCEEEEEECCCC
Confidence 4567765544444332 11111223456789999998753 568889876 333222211 1 1111234556789
Q ss_pred cEEEEcCccCCeEEEEecCCCcceeeccCccccCCCCCCCCcceEEEeeCCcEEEEEcCc--eeEeeCCCCeEEEEcccC
Q 039705 162 SFIVVGGRREFSYEYILKEGKRIIYDLPILNETTNPSENNLYPFVFLSTDGNLFIFANDR--SILLNPETNEILHVFPIL 239 (539)
Q Consensus 162 ~VyvvGG~~~~~~E~yP~~~~~~w~~~~~l~~~~~~~~~~~yp~~~~~~~G~Iyv~Gg~~--~e~yDp~tn~W~~~~p~m 239 (539)
+.+++|+.+ ..+.+|..+. ...... ..... . --.+...+||+.++.|+.+ +.+||....... .+
T Consensus 357 ~~l~~~~~d-g~v~~~~~~~-~~~~~~---~~~~~----~-v~~~~~s~dg~~l~~~~~d~~v~~~~~~~~~~~-~~--- 422 (577)
T 2ymu_A 357 QTIASASDD-KTVKLWNRNG-QLLQTL---TGHSS----S-VRGVAFSPDGQTIASASDDKTVKLWNRNGQLLQ-TL--- 422 (577)
T ss_dssp SEEEEEETT-SEEEEEETTC-CEEEEE---ECCSS----C-EEEEEECTTSSCEEEEETTSEEEEECTTCCEEE-EE---
T ss_pred CEEEEEeCC-CEEEEEcCCC-CEEEEe---cCCCC----C-eEEEEECCCCCEEEEEeCCCEEEEEeCCCCEEE-Ee---
Confidence 998888765 3566664332 011111 11100 0 0012345789988888754 678885443322 22
Q ss_pred CCCCCccCCCccEEecccccCCCCCCCcccEEEEecCCCCCcccccCCCcccccCCceEEEEeeCCCCceeeeccCCCce
Q 039705 240 RGGSRNYPASATSALLPIKLQDPNSNAIRAEVLICGGAKPEAGVLAGKGEFMNALQDCGRIEITNKSATWQREMMPSPRV 319 (539)
Q Consensus 240 p~~~r~yp~~g~av~lpl~~~~~~~~~~~g~Iyv~GG~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~~M~~~R~ 319 (539)
.. .. +...-+...| +++.+++|+.+. .+..+|.. ...-....-.....
T Consensus 423 ~~-~~-----~~v~~~~~s~--------d~~~l~~~~~d~----------------~v~~w~~~--~~~~~~~~~~~~~v 470 (577)
T 2ymu_A 423 TG-HS-----SSVWGVAFSP--------DDQTIASASDDK----------------TVKLWNRN--GQLLQTLTGHSSSV 470 (577)
T ss_dssp EC-CS-----SCEEEEEECT--------TSSEEEEEETTS----------------EEEEEETT--SCEEEEEECCSSCE
T ss_pred cC-CC-----CCeEEEEECC--------CCCEEEEEcCCC----------------EEEEEECC--CCEEEEEcCCCCCE
Confidence 21 11 1111111111 667778877541 24455542 11111112122222
Q ss_pred eceeEEecCCcEEEEcCcCCCCCCcccCCCCCCccEEEcCCCCCCCceEecCCCCCCccceeeEeeCCCCeEEEecCC
Q 039705 320 MGEMLLLPTGDVLIINGAKKGTAGWNFATDPNTTPVLYEPDDPINERFSELTPTSKPRMCHSTSVVLPDGKILVAGSN 397 (539)
Q Consensus 320 ~~~~vvlpdG~I~vvGG~~~g~~g~~~~~~~~~~~e~YdP~t~~g~~Wt~~a~~~~~R~yhs~a~llpdG~V~v~GG~ 397 (539)
.+....|||+++++++.+. ++.+||.... .-..+... .... ....+.|||+.+++|+.
T Consensus 471 -~~~~~spd~~~las~~~d~-------------~i~iw~~~~~---~~~~~~~h-~~~v--~~l~~s~dg~~l~s~~~ 528 (577)
T 2ymu_A 471 -RGVAFSPDGQTIASASDDK-------------TVKLWNRNGQ---LLQTLTGH-SSSV--RGVAFSPDGQTIASASD 528 (577)
T ss_dssp -EEEEECTTSCEEEEEETTS-------------EEEEEETTSC---EEEEEECC-SSCE--EEEEECTTSSCEEEEET
T ss_pred -EEEEEcCCCCEEEEEeCCC-------------EEEEEcCCCC---EEEEEeCC-CCCE--EEEEEcCCCCEEEEEEC
Confidence 2345578999999987651 5789995433 33332211 1111 12346799999999885
No 87
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=96.90 E-value=0.17 Score=49.30 Aligned_cols=117 Identities=14% Similarity=0.048 Sum_probs=59.9
Q ss_pred ceecCCCcEEEecCCCCCCCeEEEEeCCCCccceeecccccccccccceeEEccCCcEEEEcCccCCeEEEE-ecCCCcc
Q 039705 106 GGLSANGTIVISGGWSSRGRSVRYLSGCYHACYWKEHHWELSAKRWFSTQHILPDGSFIVVGGRREFSYEYI-LKEGKRI 184 (539)
Q Consensus 106 ~~~l~dG~l~v~GG~~~g~~~v~~ydP~~~t~~W~~~~~~m~~~R~y~s~~~L~dG~VyvvGG~~~~~~E~y-P~~~~~~ 184 (539)
-+..+||+.+++++..+ ..+.+|+....+.++..+.. +.....-...+.-+||+.+++++.....+.+| ...+ ..
T Consensus 43 ~~~spdg~~l~~~~~~~--~~v~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~-~~ 118 (343)
T 1ri6_A 43 MVVSPDKRYLYVGVRPE--FRVLAYRIAPDDGALTFAAE-SALPGSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDG-LP 118 (343)
T ss_dssp EEECTTSSEEEEEETTT--TEEEEEEECTTTCCEEEEEE-EECSSCCSEEEECTTSSEEEEEETTTTEEEEEEEETT-EE
T ss_pred EEECCCCCEEEEeecCC--CeEEEEEecCCCCceeeccc-cccCCCCcEEEEcCCCCEEEEEecCCCeEEEEECCCC-cc
Confidence 34567898666665432 56777764311455655443 33322223345556888665555544567777 4221 11
Q ss_pred eeeccCccccCCCCCCCCcce-EEEeeCCc-EEEEE--cCceeEeeCCC-CeEE
Q 039705 185 IYDLPILNETTNPSENNLYPF-VFLSTDGN-LFIFA--NDRSILLNPET-NEIL 233 (539)
Q Consensus 185 w~~~~~l~~~~~~~~~~~yp~-~~~~~~G~-Iyv~G--g~~~e~yDp~t-n~W~ 233 (539)
.......... ..+. ....++|+ ||+.+ ...+.+||..+ ++..
T Consensus 119 ~~~~~~~~~~-------~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~ 165 (343)
T 1ri6_A 119 VGVVDVVEGL-------DGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLV 165 (343)
T ss_dssp EEEEEEECCC-------TTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEE
T ss_pred ccccccccCC-------CCceEEEECCCCCEEEEecCCCCEEEEEEecCCCcee
Confidence 1111111110 0122 24557886 66654 24578899887 6554
No 88
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=96.89 E-value=0.048 Score=58.84 Aligned_cols=309 Identities=10% Similarity=0.046 Sum_probs=154.6
Q ss_pred CCceEEccCC--CcccceEEEecCCCCEEEEEccccCCCCCccCCCcccccCCCccccccccceeEEEEECCCCCEEeC-
Q 039705 19 KGKWELASEN--SGISAMHIILFPNTNKAIMLDAVSLGPSNVRLPVGIYRLNPGAWQKYVDYRALAVEYDAESAAIRPL- 95 (539)
Q Consensus 19 ~g~W~~~~~~--~~~~~~~~~ll~~~gkv~~~g~~~~~~~~~~~~~g~~~~~~~~~~g~~~~~~~~~~yDp~t~~w~~l- 95 (539)
.+.|..+... .+...+|. + .+++++|+.+..+ ..+.+||..+++....
T Consensus 125 ~~s~~~~~~~~~~~~~~~~~-~-~p~~~~~vs~~~d---------------------------~~V~v~D~~t~~~~~~i 175 (543)
T 1nir_A 125 RESWKVLVKPEDRPKKQLND-L-DLPNLFSVTLRDA---------------------------GQIALVDGDSKKIVKVI 175 (543)
T ss_dssp HHHCEESSCGGGSCSSCCSC-C-CGGGEEEEEEGGG---------------------------TEEEEEETTTCCEEEEE
T ss_pred hhhhccccccccCCcccccc-c-CCCCEEEEEEcCC---------------------------CeEEEEECCCceEEEEE
Confidence 3567666421 13344554 3 3688888776532 1366789988876433
Q ss_pred ccCCCcccccceecCCCcEEEecCCCCCCCeEEEEeC--CCCccceeecccccccccccceeEEcc----CCcEEEEcCc
Q 039705 96 KILTDTWSSSGGLSANGTIVISGGWSSRGRSVRYLSG--CYHACYWKEHHWELSAKRWFSTQHILP----DGSFIVVGGR 169 (539)
Q Consensus 96 ~~~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydP--~~~t~~W~~~~~~m~~~R~y~s~~~L~----dG~VyvvGG~ 169 (539)
..... .+..++.+||+.+.+++.. ..+.+||. . +.+ .+.. +....+-.+.+.-+ ||+.++++..
T Consensus 176 ~~g~~--~~~v~~spdg~~l~v~~~d---~~V~v~D~~~~--t~~--~~~~-i~~g~~p~~va~sp~~~~dg~~l~v~~~ 245 (543)
T 1nir_A 176 DTGYA--VHISRMSASGRYLLVIGRD---ARIDMIDLWAK--EPT--KVAE-IKIGIEARSVESSKFKGYEDRYTIAGAY 245 (543)
T ss_dssp ECSTT--EEEEEECTTSCEEEEEETT---SEEEEEETTSS--SCE--EEEE-EECCSEEEEEEECCSTTCTTTEEEEEEE
T ss_pred ecCcc--cceEEECCCCCEEEEECCC---CeEEEEECcCC--CCc--EEEE-EecCCCcceEEeCCCcCCCCCEEEEEEc
Confidence 22222 2334467899887777653 78999999 5 433 2222 44444333445555 8988888876
Q ss_pred cCCeEEEE-ecCCCcce-eeccCccccCCC---CCCCCcce-EEEeeCCcEEEEEc---CceeEeeCCCCeEEEEcccCC
Q 039705 170 REFSYEYI-LKEGKRII-YDLPILNETTNP---SENNLYPF-VFLSTDGNLFIFAN---DRSILLNPETNEILHVFPILR 240 (539)
Q Consensus 170 ~~~~~E~y-P~~~~~~w-~~~~~l~~~~~~---~~~~~yp~-~~~~~~G~Iyv~Gg---~~~e~yDp~tn~W~~~~p~mp 240 (539)
...++.+| ..+. +- ...+......+. .+.. .+. ....++++.+++.. ..+.++|..+.+-.+ +..++
T Consensus 246 ~~~~v~v~D~~t~--~~~~~i~~~g~~~~~~~~~~~~-~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~-~~~i~ 321 (543)
T 1nir_A 246 WPPQFAIMDGETL--EPKQIVSTRGMTVDTQTYHPEP-RVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLT-VTSIG 321 (543)
T ss_dssp ESSEEEEEETTTC--CEEEEEECCEECSSSCCEESCC-CEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCE-EEEEE
T ss_pred cCCeEEEEecccc--ccceeecccCcccCccccccCC-ceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcce-eEEec
Confidence 66667777 4433 22 111111000000 0000 112 23345666665554 347788887643211 11112
Q ss_pred CCCCccCCCccEEecccccCCCCCCCcccE-EEEecCCCCCcccccCCCcccccCCceEEEEeeCCCCceee--e--ccC
Q 039705 241 GGSRNYPASATSALLPIKLQDPNSNAIRAE-VLICGGAKPEAGVLAGKGEFMNALQDCGRIEITNKSATWQR--E--MMP 315 (539)
Q Consensus 241 ~~~r~yp~~g~av~lpl~~~~~~~~~~~g~-Iyv~GG~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~--~--~M~ 315 (539)
.+ .+|+ + ..+-| +++ +|+.+.. .+++..+|... .+-.. . .+|
T Consensus 322 ~~--~~~~-~-~~~sp-----------dg~~l~va~~~----------------~~~v~v~D~~t--g~l~~~i~~g~~p 368 (543)
T 1nir_A 322 AA--PFLH-D-GGWDS-----------SHRYFMTAANN----------------SNKVAVIDSKD--RRLSALVDVGKTP 368 (543)
T ss_dssp CC--SSCC-C-EEECT-----------TSCEEEEEEGG----------------GTEEEEEETTT--TEEEEEEECSSSB
T ss_pred cC--cCcc-C-ceECC-----------CCCEEEEEecC----------------CCeEEEEECCC--CeEEEeeccCCCC
Confidence 21 1221 1 22222 555 5554322 13455677642 22221 1 344
Q ss_pred CCceeceeEEecC-CcEEEEcCcCCCCCCcccCCCCCCccEEEcCCCC--CCCceEecCCCCCCccc-eeeEeeCCCCeE
Q 039705 316 SPRVMGEMLLLPT-GDVLIINGAKKGTAGWNFATDPNTTPVLYEPDDP--INERFSELTPTSKPRMC-HSTSVVLPDGKI 391 (539)
Q Consensus 316 ~~R~~~~~vvlpd-G~I~vvGG~~~g~~g~~~~~~~~~~~e~YdP~t~--~g~~Wt~~a~~~~~R~y-hs~a~llpdG~V 391 (539)
++-.... ..-|+ |++|+.+.... .++-+||.++. ....|+.+..++..... .. ..+-|||+-
T Consensus 369 h~g~g~~-~~~p~~g~~~~s~~~~d------------~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~~~~-v~~~pdg~~ 434 (543)
T 1nir_A 369 HPGRGAN-FVHPKYGPVWSTSHLGD------------GSISLIGTDPKNHPQYAWKKVAELQGQGGGSLF-IKTHPKSSH 434 (543)
T ss_dssp CCTTCEE-EEETTTEEEEEEEBSSS------------SEEEEEECCTTTCTTTBTSEEEEEECSCSCCCC-EECCTTCCE
T ss_pred CCCCCcc-cCCCCCccEEEeccCCC------------ceEEEEEeCCCCCchhcCeEEEEEEcCCCCceE-EEcCCCCCc
Confidence 4322222 33566 88998874321 15788887762 01137766554432211 22 335799988
Q ss_pred EEecCCCCCCCccCCCCCCCcceeeEEecCCCCC
Q 039705 392 LVAGSNPHSRYNLTSGSKYPTELRIEKFYPPYFD 425 (539)
Q Consensus 392 ~v~GG~~~~~~~~~~~~~~p~~~~vE~y~Ppyl~ 425 (539)
+.++...+.... . ..+|-+|+-..+.
T Consensus 435 l~v~~~~~~~~~------~--~~~v~v~d~~~~~ 460 (543)
T 1nir_A 435 LYVDTTFNPDAR------I--SQSVAVFDLKNLD 460 (543)
T ss_dssp EEECCTTCSSHH------H--HTCEEEEETTCTT
T ss_pred EEEecCCCCCcc------c--CceEEEEECCCCC
Confidence 877763222100 0 2478888887765
No 89
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=96.89 E-value=0.022 Score=57.03 Aligned_cols=189 Identities=14% Similarity=0.146 Sum_probs=103.8
Q ss_pred eeEEccCCcEEEEcCccCCeEEEE-ecCCCcceeeccCc-cccCCCCCCCCcceEEEeeCCcEEEEEcC--ceeEeeCCC
Q 039705 154 TQHILPDGSFIVVGGRREFSYEYI-LKEGKRIIYDLPIL-NETTNPSENNLYPFVFLSTDGNLFIFAND--RSILLNPET 229 (539)
Q Consensus 154 s~~~L~dG~VyvvGG~~~~~~E~y-P~~~~~~w~~~~~l-~~~~~~~~~~~yp~~~~~~~G~Iyv~Gg~--~~e~yDp~t 229 (539)
+.+.-+||++++.||.+. ++.+| ...+ .|.....+ ....+ . --.+...++|+.++.|+. .+.+||..+
T Consensus 21 ~l~~sp~g~~las~~~D~-~i~iw~~~~~--~~~~~~~~~~~h~~----~-v~~~~~sp~g~~l~s~s~D~~v~iw~~~~ 92 (345)
T 3fm0_A 21 FLAWNPAGTLLASCGGDR-RIRIWGTEGD--SWICKSVLSEGHQR----T-VRKVAWSPCGNYLASASFDATTCIWKKNQ 92 (345)
T ss_dssp EEEECTTSSCEEEEETTS-CEEEEEEETT--EEEEEEEECSSCSS----C-EEEEEECTTSSEEEEEETTSCEEEEEECC
T ss_pred EEEECCCCCEEEEEcCCC-eEEEEEcCCC--cceeeeeeccccCC----c-EEEEEECCCCCEEEEEECCCcEEEEEccC
Confidence 344556899999888763 56777 5544 44321111 11111 0 001233478999999875 467888887
Q ss_pred CeEEEEcccCCCCCCccCCCccEEecccccCCCCCCCcccEEEEecCCCCCcccccCCCcccccCCceEEEEeeCCCCce
Q 039705 230 NEILHVFPILRGGSRNYPASATSALLPIKLQDPNSNAIRAEVLICGGAKPEAGVLAGKGEFMNALQDCGRIEITNKSATW 309 (539)
Q Consensus 230 n~W~~~~p~mp~~~r~yp~~g~av~lpl~~~~~~~~~~~g~Iyv~GG~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W 309 (539)
+.+. .+..+.+ .... --+....| ++++++.|+.+. ++..+|+.. ...+
T Consensus 93 ~~~~-~~~~~~~-h~~~--v~~v~~sp-----------~~~~l~s~s~D~----------------~v~iwd~~~-~~~~ 140 (345)
T 3fm0_A 93 DDFE-CVTTLEG-HENE--VKSVAWAP-----------SGNLLATCSRDK----------------SVWVWEVDE-EDEY 140 (345)
T ss_dssp C-EE-EEEEECC-CSSC--EEEEEECT-----------TSSEEEEEETTS----------------CEEEEEECT-TSCE
T ss_pred CCeE-EEEEccC-CCCC--ceEEEEeC-----------CCCEEEEEECCC----------------eEEEEECCC-CCCe
Confidence 7654 3333332 1110 01112211 678888888652 356677753 2333
Q ss_pred eee-cc--CCCceeceeEEecCCcEEEEcCcCCCCCCcccCCCCCCccEEEcCCCCCCCceEecCCCCCCccceeeEeeC
Q 039705 310 QRE-MM--PSPRVMGEMLLLPTGDVLIINGAKKGTAGWNFATDPNTTPVLYEPDDPINERFSELTPTSKPRMCHSTSVVL 386 (539)
Q Consensus 310 ~~~-~M--~~~R~~~~~vvlpdG~I~vvGG~~~g~~g~~~~~~~~~~~e~YdP~t~~g~~Wt~~a~~~~~R~yhs~a~ll 386 (539)
... .+ ...... .....|+|+++++|+.+ + ++.+||.+++ +|.....+..-...-....+.
T Consensus 141 ~~~~~~~~h~~~v~-~~~~~p~~~~l~s~s~d-~------------~i~~w~~~~~---~~~~~~~~~~h~~~v~~l~~s 203 (345)
T 3fm0_A 141 ECVSVLNSHTQDVK-HVVWHPSQELLASASYD-D------------TVKLYREEED---DWVCCATLEGHESTVWSLAFD 203 (345)
T ss_dssp EEEEEECCCCSCEE-EEEECSSSSCEEEEETT-S------------CEEEEEEETT---EEEEEEEECCCSSCEEEEEEC
T ss_pred EEEEEecCcCCCeE-EEEECCCCCEEEEEeCC-C------------cEEEEEecCC---CEEEEEEecCCCCceEEEEEC
Confidence 332 22 222222 23456899999998866 2 5789999888 886443322111111234467
Q ss_pred CCCeEEEecCCCC
Q 039705 387 PDGKILVAGSNPH 399 (539)
Q Consensus 387 pdG~V~v~GG~~~ 399 (539)
|||+.+++|+.+.
T Consensus 204 p~g~~l~s~s~D~ 216 (345)
T 3fm0_A 204 PSGQRLASCSDDR 216 (345)
T ss_dssp TTSSEEEEEETTS
T ss_pred CCCCEEEEEeCCC
Confidence 9999999998643
No 90
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=96.88 E-value=0.29 Score=48.82 Aligned_cols=239 Identities=10% Similarity=0.086 Sum_probs=116.2
Q ss_pred CCEEeCccCCCcccccceecCCCcEEEecCCCCCCCeEEEEeCCCCccceeeccccccccc-ccceeEEccCCcEEEEcC
Q 039705 90 AAIRPLKILTDTWSSSGGLSANGTIVISGGWSSRGRSVRYLSGCYHACYWKEHHWELSAKR-WFSTQHILPDGSFIVVGG 168 (539)
Q Consensus 90 ~~w~~l~~~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydP~~~t~~W~~~~~~m~~~R-~y~s~~~L~dG~VyvvGG 168 (539)
.+|+++............+..++.++++|-. + .+..-+- +..+|+.+......+. .+.+.. ..++++|++|
T Consensus 25 ~~W~~~~~~~~~~~~~v~~~~~~~~~~~G~~--g--~i~~s~D--gG~tW~~~~~~~~~~~~~~~~i~-~~~~~~~~~g- 96 (327)
T 2xbg_A 25 NPWEAIQLPTTATILDMSFIDRHHGWLVGVN--A--TLMETRD--GGQTWEPRTLVLDHSDYRFNSVS-FQGNEGWIVG- 96 (327)
T ss_dssp CCEEEEECSCSSCEEEEEESSSSCEEEEETT--T--EEEEESS--TTSSCEECCCCCSCCCCEEEEEE-EETTEEEEEE-
T ss_pred CCceEeecCCCCcEEEEEECCCCcEEEEcCC--C--eEEEeCC--CCCCCeECCCCCCCCCccEEEEE-ecCCeEEEEE-
Confidence 4677665332222112223346788887632 1 2322222 2568998753122222 223333 3367888875
Q ss_pred ccCCeEEEE-ecCCCcceeeccCccccCCCCCCCCcceEEEeeCCcEEEEEcCc-eeEeeCCCCeEEEEcccCCCCCCcc
Q 039705 169 RREFSYEYI-LKEGKRIIYDLPILNETTNPSENNLYPFVFLSTDGNLFIFANDR-SILLNPETNEILHVFPILRGGSRNY 246 (539)
Q Consensus 169 ~~~~~~E~y-P~~~~~~w~~~~~l~~~~~~~~~~~yp~~~~~~~G~Iyv~Gg~~-~e~yDp~tn~W~~~~p~mp~~~r~y 246 (539)
..+ .+| ...+..+|......... +...+ ......++++|+.+... +.+-+-...+|+ .+.. +. ....
T Consensus 97 ~~g---~i~~S~DgG~tW~~~~~~~~~----~~~~~-~i~~~~~~~~~~~~~~g~v~~S~DgG~tW~-~~~~-~~-~~~~ 165 (327)
T 2xbg_A 97 EPP---IMLHTTDGGQSWSQIPLDPKL----PGSPR-LIKALGNGSAEMITNVGAIYRTKDSGKNWQ-ALVQ-EA-IGVM 165 (327)
T ss_dssp ETT---EEEEESSTTSSCEECCCCTTC----SSCEE-EEEEEETTEEEEEETTCCEEEESSTTSSEE-EEEC-SC-CCCE
T ss_pred CCC---eEEEECCCCCCceECccccCC----CCCeE-EEEEECCCCEEEEeCCccEEEEcCCCCCCE-Eeec-CC-Ccce
Confidence 222 355 43334588654322110 01112 22334578999888643 222223356898 4432 11 1111
Q ss_pred CCCccEEecccccCCCCCCCcccEEEEecCCCCCcccccCCCcccccCCceEEEEeeCC-CCceeeeccCCCceeceeEE
Q 039705 247 PASATSALLPIKLQDPNSNAIRAEVLICGGAKPEAGVLAGKGEFMNALQDCGRIEITNK-SATWQREMMPSPRVMGEMLL 325 (539)
Q Consensus 247 p~~g~av~lpl~~~~~~~~~~~g~Iyv~GG~~~~~~~~~~~~~~~~a~~s~~~~d~~~~-~~~W~~~~M~~~R~~~~~vv 325 (539)
...+.. .+++++++|-.. . +.+- .+. ..+|+....+..+....++.
T Consensus 166 ---~~~~~~-----------~~~~~~~~g~~G--~---------------~~~S--~d~gG~tW~~~~~~~~~~~~~~~~ 212 (327)
T 2xbg_A 166 ---RNLNRS-----------PSGEYVAVSSRG--S---------------FYST--WEPGQTAWEPHNRTTSRRLHNMGF 212 (327)
T ss_dssp ---EEEEEC-----------TTSCEEEEETTS--S---------------EEEE--ECTTCSSCEEEECCSSSCEEEEEE
T ss_pred ---EEEEEc-----------CCCcEEEEECCC--c---------------EEEE--eCCCCCceeECCCCCCCccceeEE
Confidence 112221 156777776321 1 1121 222 47899864444455556666
Q ss_pred ecCCcEEEEcCcCCCCCCcccCCCCCCccEEEcCCCCCCCceEecCC--CCCCccceeeEeeCCCCeEEEecCC
Q 039705 326 LPTGDVLIINGAKKGTAGWNFATDPNTTPVLYEPDDPINERFSELTP--TSKPRMCHSTSVVLPDGKILVAGSN 397 (539)
Q Consensus 326 lpdG~I~vvGG~~~g~~g~~~~~~~~~~~e~YdP~t~~g~~Wt~~a~--~~~~R~yhs~a~llpdG~V~v~GG~ 397 (539)
.++|++|+++.. | .+.+.+ ++.|++|+.+.. ++.....++++ ..+++++|++|+.
T Consensus 213 ~~~g~~~~~~~~--G------------~~~~s~--~D~G~tW~~~~~~~~~~~~~~~~v~-~~~~~~~~~~g~~ 269 (327)
T 2xbg_A 213 TPDGRLWMIVNG--G------------KIAFSD--PDNSENWGELLSPLRRNSVGFLDLA-YRTPNEVWLAGGA 269 (327)
T ss_dssp CTTSCEEEEETT--T------------EEEEEE--TTEEEEECCCBCTTSSCCSCEEEEE-ESSSSCEEEEEST
T ss_pred CCCCCEEEEeCC--c------------eEEEec--CCCCCeeEeccCCcccCCcceEEEE-ecCCCEEEEEeCC
Confidence 789999987642 1 122332 344669997643 22222234433 4578999999874
No 91
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=96.87 E-value=0.29 Score=49.09 Aligned_cols=218 Identities=11% Similarity=0.081 Sum_probs=110.8
Q ss_pred ceecCCCcEEEecCCCCCCCeEEEEeCCCCccceeeccccccc------ccccceeEEccCCcEEEEcCccCCeEEEE-e
Q 039705 106 GGLSANGTIVISGGWSSRGRSVRYLSGCYHACYWKEHHWELSA------KRWFSTQHILPDGSFIVVGGRREFSYEYI-L 178 (539)
Q Consensus 106 ~~~l~dG~l~v~GG~~~g~~~v~~ydP~~~t~~W~~~~~~m~~------~R~y~s~~~L~dG~VyvvGG~~~~~~E~y-P 178 (539)
.-++.+++||+.... ..+.+||+.++...|+.-.. -.. .....+..++.+|+||+.... ..+-.+ +
T Consensus 48 ~p~v~~~~v~~~~~~----g~v~a~d~~tG~~~W~~~~~-~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~--g~l~a~d~ 120 (376)
T 3q7m_A 48 HPALADNVVYAADRA----GLVKALNADDGKEIWSVSLA-EKDGWFSKEPALLSGGVTVSGGHVYIGSEK--AQVYALNT 120 (376)
T ss_dssp CCEEETTEEEEECTT----SEEEEEETTTCCEEEEEECC-C---CCSCCCCCEEEEEEEETTEEEEEETT--SEEEEEET
T ss_pred ccEEECCEEEEEcCC----CeEEEEEccCCceeeeecCc-cccccccccCcccccCceEeCCEEEEEcCC--CEEEEEEC
Confidence 344568888887542 47889999744567875332 110 111223344557888885432 334455 5
Q ss_pred cCCCcceee-ccCccccCCCCCCCCcceEEEeeCCcEEEEEcC-ceeEeeCCCCe--EEEEcccCCCCCCccCCCccEEe
Q 039705 179 KEGKRIIYD-LPILNETTNPSENNLYPFVFLSTDGNLFIFAND-RSILLNPETNE--ILHVFPILRGGSRNYPASATSAL 254 (539)
Q Consensus 179 ~~~~~~w~~-~~~l~~~~~~~~~~~yp~~~~~~~G~Iyv~Gg~-~~e~yDp~tn~--W~~~~p~mp~~~r~yp~~g~av~ 254 (539)
+++...|.. .+. ... ...++.+|+||+.... ....||+++++ |....+.-....+. ....++
T Consensus 121 ~tG~~~W~~~~~~--~~~---------~~p~~~~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~---~~~~~~ 186 (376)
T 3q7m_A 121 SDGTVAWQTKVAG--EAL---------SRPVVSDGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRG---ESAPTT 186 (376)
T ss_dssp TTCCEEEEEECSS--CCC---------SCCEEETTEEEEECTTSEEEEEETTTCCEEEEEECCC-----CC---CCCCEE
T ss_pred CCCCEEEEEeCCC--ceE---------cCCEEECCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecC---CCCcEE
Confidence 554345642 211 100 1124457888876543 47889998876 76333111000011 011111
Q ss_pred cccccCCCCCCCcccEEEEecCCCCCcccccCCCcccccCCceEEEEeeCCCCceeee-ccCCCc--------eeceeEE
Q 039705 255 LPIKLQDPNSNAIRAEVLICGGAKPEAGVLAGKGEFMNALQDCGRIEITNKSATWQRE-MMPSPR--------VMGEMLL 325 (539)
Q Consensus 255 lpl~~~~~~~~~~~g~Iyv~GG~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~-~M~~~R--------~~~~~vv 325 (539)
.++.||+ |..+ ..+..+|+.+....|+.. ..+... .... .+
T Consensus 187 ------------~~~~v~~-g~~~----------------g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~-p~ 236 (376)
T 3q7m_A 187 ------------AFGAAVV-GGDN----------------GRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTT-PV 236 (376)
T ss_dssp ------------ETTEEEE-CCTT----------------TEEEEEETTTCCEEEEEECCC-----------CCCCC-CE
T ss_pred ------------ECCEEEE-EcCC----------------CEEEEEECCCCcEEEEEecccCCCCcccccccccCCC-cE
Confidence 2567666 3322 135567775445568764 332211 1122 33
Q ss_pred ecCCcEEEEcCcCCCCCCcccCCCCCCccEEEcCCCCCCCceEecCCCCCCccceeeEeeCCCCeEEEecC
Q 039705 326 LPTGDVLIINGAKKGTAGWNFATDPNTTPVLYEPDDPINERFSELTPTSKPRMCHSTSVVLPDGKILVAGS 396 (539)
Q Consensus 326 lpdG~I~vvGG~~~g~~g~~~~~~~~~~~e~YdP~t~~g~~Wt~~a~~~~~R~yhs~a~llpdG~V~v~GG 396 (539)
+.++.||+.+. + + .+.++|+++.. ..|+.-.. ...+.+ ..+++||+...
T Consensus 237 ~~~~~v~~~~~-~-g------------~l~~~d~~tG~-~~w~~~~~-----~~~~~~--~~~~~l~~~~~ 285 (376)
T 3q7m_A 237 VVNGVVFALAY-N-G------------NLTALDLRSGQ-IMWKRELG-----SVNDFI--VDGNRIYLVDQ 285 (376)
T ss_dssp EETTEEEEECT-T-S------------CEEEEETTTCC-EEEEECCC-----CEEEEE--EETTEEEEEET
T ss_pred EECCEEEEEec-C-c------------EEEEEECCCCc-EEeeccCC-----CCCCce--EECCEEEEEcC
Confidence 44888888542 2 1 46889998762 25875321 122333 34899998764
No 92
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=96.87 E-value=0.28 Score=46.85 Aligned_cols=240 Identities=13% Similarity=0.165 Sum_probs=113.9
Q ss_pred EEEEECCCCCEEeCccCCCcccccceecCCCcEEEecCCCCCCCeEEEEeCCCCccceeecccccccccccceeEEccCC
Q 039705 82 AVEYDAESAAIRPLKILTDTWSSSGGLSANGTIVISGGWSSRGRSVRYLSGCYHACYWKEHHWELSAKRWFSTQHILPDG 161 (539)
Q Consensus 82 ~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydP~~~t~~W~~~~~~m~~~R~y~s~~~L~dG 161 (539)
..+||..+.+.......+......-...++++++++|+.. ..+.+||... ......... +......-..... ++
T Consensus 41 v~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---g~i~~~~~~~-~~~~~~~~~-~~~~~~~i~~~~~-~~ 114 (313)
T 3odt_A 41 VRLWSKDDQWLGTVVYTGQGFLNSVCYDSEKELLLFGGKD---TMINGVPLFA-TSGEDPLYT-LIGHQGNVCSLSF-QD 114 (313)
T ss_dssp EEEEEESSSEEEEEEEECSSCEEEEEEETTTTEEEEEETT---SCEEEEETTC-CTTSCC-CE-ECCCSSCEEEEEE-ET
T ss_pred EEEEECCCCEEEEEeecCCccEEEEEECCCCCEEEEecCC---CeEEEEEeee-cCCCCcccc-hhhcccCEEEEEe-cC
Confidence 5678877665444333333333334556799999999863 4577777651 111222221 3222222233344 78
Q ss_pred cEEEEcCccCCeEEEEecCCCcce-eeccCccccCCCCCCCCcceEEEee-CCcEEEEEcC--ceeEeeCCCCeEEEEcc
Q 039705 162 SFIVVGGRREFSYEYILKEGKRII-YDLPILNETTNPSENNLYPFVFLST-DGNLFIFAND--RSILLNPETNEILHVFP 237 (539)
Q Consensus 162 ~VyvvGG~~~~~~E~yP~~~~~~w-~~~~~l~~~~~~~~~~~yp~~~~~~-~G~Iyv~Gg~--~~e~yDp~tn~W~~~~p 237 (539)
+.+++|+.++ .+.+|- .. +- .... .... ... .....+ +++.++.++. .+.+||.. +-.+.+.
T Consensus 115 ~~l~~~~~d~-~i~~~d-~~--~~~~~~~---~~~~----~v~-~~~~~~~~~~~l~~~~~d~~i~i~d~~--~~~~~~~ 180 (313)
T 3odt_A 115 GVVISGSWDK-TAKVWK-EG--SLVYNLQ---AHNA----SVW-DAKVVSFSENKFLTASADKTIKLWQND--KVIKTFS 180 (313)
T ss_dssp TEEEEEETTS-EEEEEE-TT--EEEEEEE---CCSS----CEE-EEEEEETTTTEEEEEETTSCEEEEETT--EEEEEEC
T ss_pred CEEEEEeCCC-CEEEEc-CC--cEEEecc---cCCC----cee-EEEEccCCCCEEEEEECCCCEEEEecC--ceEEEEe
Confidence 8888887654 344552 11 11 0110 1000 011 112234 7888888875 46788833 2222221
Q ss_pred cCCCCCCccCCCccEEecccccCCCCCCCcccEEEEecCCCCCcccccCCCcccccCCceEEEEeeCCCCceeee-ccCC
Q 039705 238 ILRGGSRNYPASATSALLPIKLQDPNSNAIRAEVLICGGAKPEAGVLAGKGEFMNALQDCGRIEITNKSATWQRE-MMPS 316 (539)
Q Consensus 238 ~mp~~~r~yp~~g~av~lpl~~~~~~~~~~~g~Iyv~GG~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~-~M~~ 316 (539)
.... ... ......| +++ +++|+.+ ..+..+|+.. .+-... ....
T Consensus 181 ~~~~-~~i----~~~~~~~-----------~~~-~~~~~~d----------------g~i~i~d~~~--~~~~~~~~~~~ 225 (313)
T 3odt_A 181 GIHN-DVV----RHLAVVD-----------DGH-FISCSND----------------GLIKLVDMHT--GDVLRTYEGHE 225 (313)
T ss_dssp SSCS-SCE----EEEEEEE-----------TTE-EEEEETT----------------SEEEEEETTT--CCEEEEEECCS
T ss_pred ccCc-ccE----EEEEEcC-----------CCe-EEEccCC----------------CeEEEEECCc--hhhhhhhhcCC
Confidence 1111 000 1122211 567 6676654 1355677642 211111 2222
Q ss_pred CceeceeEEecCCcEEEEcCcCCCCCCcccCCCCCCccEEEcCCCCCCCceEecCCCCCCccceeeEeeCCCCeEEEecC
Q 039705 317 PRVMGEMLLLPTGDVLIINGAKKGTAGWNFATDPNTTPVLYEPDDPINERFSELTPTSKPRMCHSTSVVLPDGKILVAGS 396 (539)
Q Consensus 317 ~R~~~~~vvlpdG~I~vvGG~~~g~~g~~~~~~~~~~~e~YdP~t~~g~~Wt~~a~~~~~R~yhs~a~llpdG~V~v~GG 396 (539)
.... +....+||+ +++|+.+ + .+.+||.++. +....-..+.... ....+.|||++++ |+
T Consensus 226 ~~i~-~~~~~~~~~-l~~~~~d-g------------~v~iwd~~~~---~~~~~~~~~~~~i--~~~~~~~~~~~~~-~~ 284 (313)
T 3odt_A 226 SFVY-CIKLLPNGD-IVSCGED-R------------TVRIWSKENG---SLKQVITLPAISI--WSVDCMSNGDIIV-GS 284 (313)
T ss_dssp SCEE-EEEECTTSC-EEEEETT-S------------EEEEECTTTC---CEEEEEECSSSCE--EEEEECTTSCEEE-EE
T ss_pred ceEE-EEEEecCCC-EEEEecC-C------------EEEEEECCCC---ceeEEEeccCceE--EEEEEccCCCEEE-Ee
Confidence 2222 334567886 4556544 2 5889999887 5432211111121 2344679999554 55
Q ss_pred C
Q 039705 397 N 397 (539)
Q Consensus 397 ~ 397 (539)
.
T Consensus 285 ~ 285 (313)
T 3odt_A 285 S 285 (313)
T ss_dssp T
T ss_pred C
Confidence 4
No 93
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=96.84 E-value=0.14 Score=55.69 Aligned_cols=145 Identities=14% Similarity=0.099 Sum_probs=74.9
Q ss_pred EeeCCcEEEEEcC--ceeEeeCCCCeEEEEcccCCCCCCccCCCccEEecccccCCCCCCCcccEEEEecCCCCCccccc
Q 039705 208 LSTDGNLFIFAND--RSILLNPETNEILHVFPILRGGSRNYPASATSALLPIKLQDPNSNAIRAEVLICGGAKPEAGVLA 285 (539)
Q Consensus 208 ~~~~G~Iyv~Gg~--~~e~yDp~tn~W~~~~p~mp~~~r~yp~~g~av~lpl~~~~~~~~~~~g~Iyv~GG~~~~~~~~~ 285 (539)
..+||++++.|+. .+.+||..+++....+.... .+...+.+...-+...| +++.++.|+.+.
T Consensus 198 fspdg~~las~s~D~~i~lwd~~~g~~~~~~~~~~--~~~~~h~~~V~~v~~sp--------dg~~l~s~s~D~------ 261 (611)
T 1nr0_A 198 YNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDS--LKNVAHSGSVFGLTWSP--------DGTKIASASADK------ 261 (611)
T ss_dssp ECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTT--SSSCSSSSCEEEEEECT--------TSSEEEEEETTS------
T ss_pred ECCCCCEEEEEECCCcEEEEECCCCcEeeeecccc--ccccccCCCEEEEEECC--------CCCEEEEEeCCC------
Confidence 3479999998875 47889988877553331100 00000112111111111 678888888652
Q ss_pred CCCcccccCCceEEEEeeCCCCceeee-ccCCC-ceeceeEEecCCcEEEEcCcCCCCCCcccCCCCCCccEEEcCCCCC
Q 039705 286 GKGEFMNALQDCGRIEITNKSATWQRE-MMPSP-RVMGEMLLLPTGDVLIINGAKKGTAGWNFATDPNTTPVLYEPDDPI 363 (539)
Q Consensus 286 ~~~~~~~a~~s~~~~d~~~~~~~W~~~-~M~~~-R~~~~~vvlpdG~I~vvGG~~~g~~g~~~~~~~~~~~e~YdP~t~~ 363 (539)
++..+|+. +.+.... .+... ......+ ..+++.++.++.+ + ++.+||+++.
T Consensus 262 ----------~v~lWd~~--~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~s~s~d-~------------~i~~~~~~~~- 314 (611)
T 1nr0_A 262 ----------TIKIWNVA--TLKVEKTIPVGTRIEDQQLGI-IWTKQALVSISAN-G------------FINFVNPELG- 314 (611)
T ss_dssp ----------EEEEEETT--TTEEEEEEECCSSGGGCEEEE-EECSSCEEEEETT-C------------CEEEEETTTT-
T ss_pred ----------eEEEEeCC--CCceeeeecCCCCccceeEEE-EEcCCEEEEEeCC-C------------cEEEEeCCCC-
Confidence 34556653 2332222 22111 0111123 3378888877755 2 5789998876
Q ss_pred CCceEecCCCCCCccceeeEeeCCCCeEEEecCCCC
Q 039705 364 NERFSELTPTSKPRMCHSTSVVLPDGKILVAGSNPH 399 (539)
Q Consensus 364 g~~Wt~~a~~~~~R~yhs~a~llpdG~V~v~GG~~~ 399 (539)
+-...-.-.... -....+.|||+.+++|+.+.
T Consensus 315 --~~~~~~~gh~~~--v~~l~~spdg~~l~s~s~D~ 346 (611)
T 1nr0_A 315 --SIDQVRYGHNKA--ITALSSSADGKTLFSADAEG 346 (611)
T ss_dssp --EEEEEECCCSSC--EEEEEECTTSSEEEEEETTS
T ss_pred --CcceEEcCCCCC--EEEEEEeCCCCEEEEEeCCC
Confidence 432211111111 12234579999999998754
No 94
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=96.81 E-value=0.036 Score=54.68 Aligned_cols=238 Identities=13% Similarity=0.046 Sum_probs=114.7
Q ss_pred cCCCcEEEecCCCCCCCeEEEEeCCCCccceeecccccccccccceeEEc-c--CCcEEEEcCccCCeEEEE-ecCCCcc
Q 039705 109 SANGTIVISGGWSSRGRSVRYLSGCYHACYWKEHHWELSAKRWFSTQHIL-P--DGSFIVVGGRREFSYEYI-LKEGKRI 184 (539)
Q Consensus 109 l~dG~l~v~GG~~~g~~~v~~ydP~~~t~~W~~~~~~m~~~R~y~s~~~L-~--dG~VyvvGG~~~~~~E~y-P~~~~~~ 184 (539)
.+||+.+++|+.+ ..+++||.. +.+...+.. +......-..+.. + +|++++.|+.+ .++.+| ..+. .
T Consensus 22 s~~g~~lasgs~D---~~v~lwd~~--~~~~~~~~~-l~gH~~~V~~v~~~~~~~~~~l~s~s~D-~~v~iWd~~~~--~ 92 (316)
T 3bg1_A 22 DYYGTRLATCSSD---RSVKIFDVR--NGGQILIAD-LRGHEGPVWQVAWAHPMYGNILASCSYD-RKVIIWREENG--T 92 (316)
T ss_dssp CGGGCEEEEEETT---TEEEEEEEE--TTEEEEEEE-EECCSSCEEEEEECCGGGSSCEEEEETT-SCEEEECCSSS--C
T ss_pred cCCCCEEEEEeCC---CeEEEEEec--CCCcEEEEE-EcCCCccEEEEEeCCCCCCCEEEEEECC-CEEEEEECCCC--c
Confidence 4689999999863 689999986 443322222 3321111222332 2 47888888776 456777 5543 3
Q ss_pred eeeccCccccCCCCCCCCcceEEEeeC--CcEEEEEcC--ceeEeeCCCC-eEEEEcccCCCCCCccCCCccEEeccccc
Q 039705 185 IYDLPILNETTNPSENNLYPFVFLSTD--GNLFIFAND--RSILLNPETN-EILHVFPILRGGSRNYPASATSALLPIKL 259 (539)
Q Consensus 185 w~~~~~l~~~~~~~~~~~yp~~~~~~~--G~Iyv~Gg~--~~e~yDp~tn-~W~~~~p~mp~~~r~yp~~g~av~lpl~~ 259 (539)
|.....+...... .. .+...++ |++++.|+. .+.+||..++ .|. ....+.. .... .-....-|-..
T Consensus 93 ~~~~~~~~~h~~~----V~-~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~-~~~~~~~-h~~~--v~~~~~~~~~~ 163 (316)
T 3bg1_A 93 WEKSHEHAGHDSS----VN-SVCWAPHDYGLILACGSSDGAISLLTYTGEGQWE-VKKINNA-HTIG--CNAVSWAPAVV 163 (316)
T ss_dssp CCEEEEECCCSSC----CC-EEEECCTTTCSCEEEECSSSCEEEEEECSSSCEE-ECCBTTS-SSSC--BCCCEECCCCC
T ss_pred ceEEEEccCCCCc----eE-EEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcc-eeeeecc-ccCC--cceEEEccccC
Confidence 4221111111110 01 1223355 788888875 4678888765 464 2222221 1000 00111111000
Q ss_pred C-----CCCC-CCcccEEEEecCCCCCcccccCCCcccccCCceEEEEeeCCCCceeee-ccCC--CceeceeEEecCC-
Q 039705 260 Q-----DPNS-NAIRAEVLICGGAKPEAGVLAGKGEFMNALQDCGRIEITNKSATWQRE-MMPS--PRVMGEMLLLPTG- 329 (539)
Q Consensus 260 ~-----~~~~-~~~~g~Iyv~GG~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~-~M~~--~R~~~~~vvlpdG- 329 (539)
. .... ....++.++.|+.+. .+..+|+.. ...|... .+.. .... +...-|++
T Consensus 164 ~~~~~~~~~~~~~~~~~~l~sgs~D~----------------~v~lWd~~~-~~~~~~~~~l~~h~~~V~-~v~~sp~~~ 225 (316)
T 3bg1_A 164 PGSLIDHPSGQKPNYIKRFASGGCDN----------------LIKLWKEEE-DGQWKEEQKLEAHSDWVR-DVAWAPSIG 225 (316)
T ss_dssp C------CCSCCCCCCCBEECCBTTS----------------BCCEEEECT-TSCEEEEECCBCCSSCEE-EEECCCCSS
T ss_pred CccccccccccCccccceEEEecCCC----------------eEEEEEeCC-CCccceeeecccCCCceE-EEEecCCCC
Confidence 0 0000 000246778877651 244566642 3456554 3322 2222 22234665
Q ss_pred ---cEEEEcCcCCCCCCcccCCCCCCccEEEcCCCCCCCceEe--cCCCCCCccceeeEeeCCCCeEEEecCCC
Q 039705 330 ---DVLIINGAKKGTAGWNFATDPNTTPVLYEPDDPINERFSE--LTPTSKPRMCHSTSVVLPDGKILVAGSNP 398 (539)
Q Consensus 330 ---~I~vvGG~~~g~~g~~~~~~~~~~~e~YdP~t~~g~~Wt~--~a~~~~~R~yhs~a~llpdG~V~v~GG~~ 398 (539)
++++.|+.+ + ++.+||.++....+|.. +... .... .....-|||+.+++||.+
T Consensus 226 ~~~~~las~s~D-~------------~v~iw~~~~~~~~~~~~~~~~~~-~~~v--~~v~~sp~g~~las~~~D 283 (316)
T 3bg1_A 226 LPTSTIASCSQD-G------------RVFIWTCDDASSNTWSPKLLHKF-NDVV--WHVSWSITANILAVSGGD 283 (316)
T ss_dssp CSCCEEEEEETT-C------------EEEEEECSSTTCCCCBCCEEEEC-SSCE--EEEEECTTTCCEEEEESS
T ss_pred CCCceEEEEcCC-C------------eEEEEEccCccccchhhhhhhcC-CCcE--EEEEEcCCCCEEEEEcCC
Confidence 788888766 2 67889887631114431 1110 1111 123457999999998863
No 95
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=96.79 E-value=0.15 Score=59.85 Aligned_cols=253 Identities=11% Similarity=0.076 Sum_probs=126.3
Q ss_pred EEEEECCCCCEEeCccCCCcccccceecCCCcEEEecCCCCCCCeEEEEeCCCCccceeecccccccc-cccceeEEcc-
Q 039705 82 AVEYDAESAAIRPLKILTDTWSSSGGLSANGTIVISGGWSSRGRSVRYLSGCYHACYWKEHHWELSAK-RWFSTQHILP- 159 (539)
Q Consensus 82 ~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydP~~~t~~W~~~~~~m~~~-R~y~s~~~L~- 159 (539)
..+||..+.+....-..+.......++.+||+++++|+.+ ..+.+||.. +.+.... +... ..-.+.+..+
T Consensus 639 i~vw~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d---~~v~vwd~~--~~~~~~~---~~~~~~~v~~~~~~~~ 710 (1249)
T 3sfz_A 639 LQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIATCSAD---KKVKIWDSA--TGKLVHT---YDEHSEQVNCCHFTNK 710 (1249)
T ss_dssp EEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETT---SEEEEEETT--TCCEEEE---EECCSSCEEEEEECSS
T ss_pred EEEEECCCCCEEEEeccCCCCEEEEEEecCCCEEEEEeCC---CeEEEEECC--CCceEEE---EcCCCCcEEEEEEecC
Confidence 6689988876543222333322334556899999999853 579999987 5433221 2211 1122233334
Q ss_pred -CCcEEEEcCccCCeEEEE-ecCCCcceeeccCccccCCCCCCCCcceEEEeeCCcEEEEEcC--ceeEeeCCCCeEEEE
Q 039705 160 -DGSFIVVGGRREFSYEYI-LKEGKRIIYDLPILNETTNPSENNLYPFVFLSTDGNLFIFAND--RSILLNPETNEILHV 235 (539)
Q Consensus 160 -dG~VyvvGG~~~~~~E~y-P~~~~~~w~~~~~l~~~~~~~~~~~yp~~~~~~~G~Iyv~Gg~--~~e~yDp~tn~W~~~ 235 (539)
++.+++.|+.+ ..+.+| ..+. +... . +....+ . --.+...++|++++.|+. .+.+||..+.+-...
T Consensus 711 ~~~~~l~sg~~d-~~v~vwd~~~~--~~~~-~-~~~h~~----~-v~~~~~sp~~~~l~s~s~dg~v~vwd~~~~~~~~~ 780 (1249)
T 3sfz_A 711 SNHLLLATGSND-FFLKLWDLNQK--ECRN-T-MFGHTN----S-VNHCRFSPDDELLASCSADGTLRLWDVRSANERKS 780 (1249)
T ss_dssp SSCCEEEEEETT-SCEEEEETTSS--SEEE-E-ECCCSS----C-EEEEEECSSTTEEEEEESSSEEEEEEGGGTEEEEE
T ss_pred CCceEEEEEeCC-CeEEEEECCCc--chhh-e-ecCCCC----C-EEEEEEecCCCEEEEEECCCeEEEEeCCCCcccce
Confidence 34566666554 456677 4433 2211 0 111110 0 112334578999888875 477899887764422
Q ss_pred cccCC--CCCCccC--CCccEEecccccCCCCCCCcccEEEEecCCCCCcccccCCCcccccCCceEEEEeeCCCCceee
Q 039705 236 FPILR--GGSRNYP--ASATSALLPIKLQDPNSNAIRAEVLICGGAKPEAGVLAGKGEFMNALQDCGRIEITNKSATWQR 311 (539)
Q Consensus 236 ~p~mp--~~~r~yp--~~g~av~lpl~~~~~~~~~~~g~Iyv~GG~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~ 311 (539)
+.... ......+ .......+... .+++.+++++.. .+..+|+.. .....
T Consensus 781 ~~~~~~~~~~~~~~~~~~~~v~~~~~s--------~dg~~l~~~~~~-----------------~v~~~d~~~--~~~~~ 833 (1249)
T 3sfz_A 781 INVKRFFLSSEDPPEDVEVIVKCCSWS--------ADGDKIIVAAKN-----------------KVLLFDIHT--SGLLA 833 (1249)
T ss_dssp EECCCCC--------CCCCCBCCCCBC--------TTSSEEEEEETT-----------------EEEEEETTT--CCEEE
T ss_pred ecccccccccCCccccccceEEEEEEC--------CCCCEEEEEcCC-----------------cEEEEEecC--CCcee
Confidence 21100 0000000 00000011111 156666665521 244566542 22222
Q ss_pred e-c-cCCCceeceeEEecCCcEEEEcCcCCCCCCcccCCCCCCccEEEcCCCCCCCceE-ecCCCCCCccceeeEeeCCC
Q 039705 312 E-M-MPSPRVMGEMLLLPTGDVLIINGAKKGTAGWNFATDPNTTPVLYEPDDPINERFS-ELTPTSKPRMCHSTSVVLPD 388 (539)
Q Consensus 312 ~-~-M~~~R~~~~~vvlpdG~I~vvGG~~~g~~g~~~~~~~~~~~e~YdP~t~~g~~Wt-~~a~~~~~R~yhs~a~llpd 388 (539)
. . -..... ......|+|+++++|+.+ + ++.+||.++. +-. .+.. .... -....+.||
T Consensus 834 ~~~~~~~~~v-~~~~~sp~~~~l~~~~~d-g------------~v~vwd~~~~---~~~~~~~~-h~~~--v~~v~~spd 893 (1249)
T 3sfz_A 834 EIHTGHHSTI-QYCDFSPYDHLAVIALSQ-Y------------CVELWNIDSR---LKVADCRG-HLSW--VHGVMFSPD 893 (1249)
T ss_dssp EEECSSSSCC-CEEEECSSTTEEEEECSS-S------------CEEEEETTTT---EEEEEECC-CSSC--EEEEEECTT
T ss_pred EEcCCCCCce-EEEEEcCCCCEEEEEeCC-C------------eEEEEEcCCC---ceeeecCC-Cccc--eEEEEECCC
Confidence 1 1 112222 233567899999999865 2 5789998876 322 2211 1111 123456799
Q ss_pred CeEEEecCCCC
Q 039705 389 GKILVAGSNPH 399 (539)
Q Consensus 389 G~V~v~GG~~~ 399 (539)
|+.+++|+.+.
T Consensus 894 g~~l~s~s~dg 904 (1249)
T 3sfz_A 894 GSSFLTASDDQ 904 (1249)
T ss_dssp SSEEEEEETTS
T ss_pred CCEEEEEeCCC
Confidence 99999998754
No 96
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=96.77 E-value=0.13 Score=52.25 Aligned_cols=137 Identities=9% Similarity=0.067 Sum_probs=72.4
Q ss_pred eEEEEECCCCCEEeCccCCCcccccceecCCCcEEEecCCCCCCCeEEEEeCCCCccceeecccccccccccceeEEccC
Q 039705 81 LAVEYDAESAAIRPLKILTDTWSSSGGLSANGTIVISGGWSSRGRSVRYLSGCYHACYWKEHHWELSAKRWFSTQHILPD 160 (539)
Q Consensus 81 ~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydP~~~t~~W~~~~~~m~~~R~y~s~~~L~d 160 (539)
...+||+.+.+....-..+.......+..++|+.+++.+..+ ..+.+||+. +.+.... +.....-.+.+.-+|
T Consensus 192 ~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~i~~~d~~--~~~~~~~---~~~~~~~~~~~~~~~ 264 (433)
T 3bws_A 192 AVHVFDLKTLAYKATVDLTGKWSKILLYDPIRDLVYCSNWIS--EDISVIDRK--TKLEIRK---TDKIGLPRGLLLSKD 264 (433)
T ss_dssp EEEEEETTTCCEEEEEECSSSSEEEEEEETTTTEEEEEETTT--TEEEEEETT--TTEEEEE---CCCCSEEEEEEECTT
T ss_pred EEEEEECCCceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCC--CcEEEEECC--CCcEEEE---ecCCCCceEEEEcCC
Confidence 467899988765433222222222334567777664444322 579999997 5544322 222222233445568
Q ss_pred CcEEEEcCccC-------CeEEEE-ecCCCccee-eccCccccCCCCCCCCcc-eEEEeeCCc-EEEEEcC--ceeEeeC
Q 039705 161 GSFIVVGGRRE-------FSYEYI-LKEGKRIIY-DLPILNETTNPSENNLYP-FVFLSTDGN-LFIFAND--RSILLNP 227 (539)
Q Consensus 161 G~VyvvGG~~~-------~~~E~y-P~~~~~~w~-~~~~l~~~~~~~~~~~yp-~~~~~~~G~-Iyv~Gg~--~~e~yDp 227 (539)
|+.+++++... ..+.+| +.+. +.. .... .. .+ .....++|+ +|+.+.. .+.+||.
T Consensus 265 g~~l~~~~~~~~~~~~~dg~i~~~d~~~~--~~~~~~~~-~~---------~~~~~~~~~~g~~l~~~~~~~~~v~v~d~ 332 (433)
T 3bws_A 265 GKELYIAQFSASNQESGGGRLGIYSMDKE--KLIDTIGP-PG---------NKRHIVSGNTENKIYVSDMCCSKIEVYDL 332 (433)
T ss_dssp SSEEEEEEEESCTTCSCCEEEEEEETTTT--EEEEEEEE-EE---------CEEEEEECSSTTEEEEEETTTTEEEEEET
T ss_pred CCEEEEEECCCCccccCCCeEEEEECCCC--cEEeeccC-CC---------CcceEEECCCCCEEEEEecCCCEEEEEEC
Confidence 87777776532 245566 4433 221 1110 00 11 123446784 7777653 4788999
Q ss_pred CCCeEEEEc
Q 039705 228 ETNEILHVF 236 (539)
Q Consensus 228 ~tn~W~~~~ 236 (539)
.+++..+.+
T Consensus 333 ~~~~~~~~~ 341 (433)
T 3bws_A 333 KEKKVQKSI 341 (433)
T ss_dssp TTTEEEEEE
T ss_pred CCCcEEEEe
Confidence 988765434
No 97
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=96.77 E-value=0.25 Score=50.74 Aligned_cols=209 Identities=11% Similarity=0.099 Sum_probs=108.5
Q ss_pred EEEEECCCCCEEeCccCCCcccccceecCCCcEEEecCCCCCCCeEEEEeCCCCccceeecccccccccccceeEEccCC
Q 039705 82 AVEYDAESAAIRPLKILTDTWSSSGGLSANGTIVISGGWSSRGRSVRYLSGCYHACYWKEHHWELSAKRWFSTQHILPDG 161 (539)
Q Consensus 82 ~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydP~~~t~~W~~~~~~m~~~R~y~s~~~L~dG 161 (539)
..+||..+.+....-..+.... ..+..++.++++|+.+ ..+++||.. +.+-.. . +......-.+... ++
T Consensus 155 i~iwd~~~~~~~~~~~~h~~~v--~~l~~~~~~l~sg~~d---g~i~vwd~~--~~~~~~--~-~~~h~~~v~~l~~-~~ 223 (435)
T 1p22_A 155 IKIWDKNTLECKRILTGHTGSV--LCLQYDERVIITGSSD---STVRVWDVN--TGEMLN--T-LIHHCEAVLHLRF-NN 223 (435)
T ss_dssp EEEEESSSCCEEEEECCCSSCE--EEEECCSSEEEEEETT---SCEEEEESS--SCCEEE--E-ECCCCSCEEEEEC-CT
T ss_pred EEEEeCCCCeEEEEEcCCCCcE--EEEEECCCEEEEEcCC---CeEEEEECC--CCcEEE--E-EcCCCCcEEEEEE-cC
Confidence 5678888766544322222111 1223389999999863 578999987 443221 1 3222222233344 56
Q ss_pred cEEEEcCccCCeEEEE-ecCCCcceeeccCccccCCCCCCCCcceEEEeeCCcEEEEEcC--ceeEeeCCCCeEEEEccc
Q 039705 162 SFIVVGGRREFSYEYI-LKEGKRIIYDLPILNETTNPSENNLYPFVFLSTDGNLFIFAND--RSILLNPETNEILHVFPI 238 (539)
Q Consensus 162 ~VyvvGG~~~~~~E~y-P~~~~~~w~~~~~l~~~~~~~~~~~yp~~~~~~~G~Iyv~Gg~--~~e~yDp~tn~W~~~~p~ 238 (539)
..+++|+.++ .+.+| ..+. ........+.... .+...+..+|+.++.|+. .+.+||..+.+-...+
T Consensus 224 ~~l~s~s~dg-~i~vwd~~~~-~~~~~~~~~~~~~-------~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~-- 292 (435)
T 1p22_A 224 GMMVTCSKDR-SIAVWDMASP-TDITLRRVLVGHR-------AAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTL-- 292 (435)
T ss_dssp TEEEEEETTS-CEEEEECSSS-SCCEEEEEECCCS-------SCEEEEEEETTEEEEEETTSEEEEEETTTCCEEEEE--
T ss_pred CEEEEeeCCC-cEEEEeCCCC-CCceeeeEecCCC-------CcEEEEEeCCCEEEEEeCCCeEEEEECCcCcEEEEE--
Confidence 7777777653 56677 4332 1111101111111 122344558888888875 4788999887655333
Q ss_pred CCCCCCccCCCccEEecccccCCCCCCCcccEEEEecCCCCCcccccCCCcccccCCceEEEEeeCCCCceeeeccCCCc
Q 039705 239 LRGGSRNYPASATSALLPIKLQDPNSNAIRAEVLICGGAKPEAGVLAGKGEFMNALQDCGRIEITNKSATWQREMMPSPR 318 (539)
Q Consensus 239 mp~~~r~yp~~g~av~lpl~~~~~~~~~~~g~Iyv~GG~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~~M~~~R 318 (539)
.. ... ....+ . .+++.+++|+.+. .+..+|+.. .+-.. .+....
T Consensus 293 -~~-~~~----~v~~~-~----------~~~~~l~~g~~dg----------------~i~iwd~~~--~~~~~-~~~~h~ 336 (435)
T 1p22_A 293 -NG-HKR----GIACL-Q----------YRDRLVVSGSSDN----------------TIRLWDIEC--GACLR-VLEGHE 336 (435)
T ss_dssp -EC-CSS----CEEEE-E----------EETTEEEEEETTS----------------CEEEEETTT--CCEEE-EECCCS
T ss_pred -cC-CCC----cEEEE-E----------eCCCEEEEEeCCC----------------eEEEEECCC--CCEEE-EEeCCc
Confidence 22 111 11121 1 2567788887651 355677642 11111 121111
Q ss_pred eeceeEEecCCcEEEEcCcCCCCCCcccCCCCCCccEEEcCCCC
Q 039705 319 VMGEMLLLPTGDVLIINGAKKGTAGWNFATDPNTTPVLYEPDDP 362 (539)
Q Consensus 319 ~~~~~vvlpdG~I~vvGG~~~g~~g~~~~~~~~~~~e~YdP~t~ 362 (539)
....++.. |++.+++|+.+ | ++.+||..+.
T Consensus 337 ~~v~~~~~-~~~~l~sg~~d-g------------~i~vwd~~~~ 366 (435)
T 1p22_A 337 ELVRCIRF-DNKRIVSGAYD-G------------KIKVWDLVAA 366 (435)
T ss_dssp SCEEEEEC-CSSEEEEEETT-S------------CEEEEEHHHH
T ss_pred CcEEEEEe-cCCEEEEEeCC-C------------cEEEEECCCC
Confidence 11223444 99999999865 2 5788887654
No 98
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=96.76 E-value=0.13 Score=51.58 Aligned_cols=226 Identities=9% Similarity=0.030 Sum_probs=107.5
Q ss_pred ceecCCCcEEEecCCCCCCCeEEEEeCCCCccceeecccccccccccceeEEccCCcEEEEcCccCCeEEEE-ecCCCcc
Q 039705 106 GGLSANGTIVISGGWSSRGRSVRYLSGCYHACYWKEHHWELSAKRWFSTQHILPDGSFIVVGGRREFSYEYI-LKEGKRI 184 (539)
Q Consensus 106 ~~~l~dG~l~v~GG~~~g~~~v~~ydP~~~t~~W~~~~~~m~~~R~y~s~~~L~dG~VyvvGG~~~~~~E~y-P~~~~~~ 184 (539)
....+||+++++|+.. ..+.+||.. ......+.. ....-.+.+..++|+.+++++.++ .+.+| ..+. +
T Consensus 114 ~~~s~~~~~l~~~~~d---g~i~i~~~~--~~~~~~~~~---~~~~v~~~~~~~~~~~l~~~~~d~-~i~iwd~~~~--~ 182 (425)
T 1r5m_A 114 LAWSHDGNSIVTGVEN---GELRLWNKT--GALLNVLNF---HRAPIVSVKWNKDGTHIISMDVEN-VTILWNVISG--T 182 (425)
T ss_dssp EEECTTSSEEEEEETT---SCEEEEETT--SCEEEEECC---CCSCEEEEEECTTSSEEEEEETTC-CEEEEETTTT--E
T ss_pred EEEcCCCCEEEEEeCC---CeEEEEeCC--CCeeeeccC---CCccEEEEEECCCCCEEEEEecCC-eEEEEECCCC--c
Confidence 3456789999998763 468899954 322222211 112223445556888888887654 34555 3332 2
Q ss_pred ee-eccCccccC--------CCCCCCCcceEEEeeCCcEEEEEcC--ceeEeeCCCCeEEEEcccCCCCCCccCCCccEE
Q 039705 185 IY-DLPILNETT--------NPSENNLYPFVFLSTDGNLFIFAND--RSILLNPETNEILHVFPILRGGSRNYPASATSA 253 (539)
Q Consensus 185 w~-~~~~l~~~~--------~~~~~~~yp~~~~~~~G~Iyv~Gg~--~~e~yDp~tn~W~~~~p~mp~~~r~yp~~g~av 253 (539)
.. ......... ........ .+...++++ +++|+. .+.+||..+++-...+ .. .... .....
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~g~i~~~d~~~~~~~~~~---~~-~~~~--i~~~~ 254 (425)
T 1r5m_A 183 VMQHFELKETGGSSINAENHSGDGSLGV-DVEWVDDDK-FVIPGPKGAIFVYQITEKTPTGKL---IG-HHGP--ISVLE 254 (425)
T ss_dssp EEEEECCC---------------CCCBS-CCEEEETTE-EEEECGGGCEEEEETTCSSCSEEE---CC-CSSC--EEEEE
T ss_pred EEEEeeccccCccceeeccccCCcceee-EEEEcCCCE-EEEEcCCCeEEEEEcCCCceeeee---cc-CCCc--eEEEE
Confidence 11 111100000 00000001 112334555 555553 4778998876533222 11 0010 01112
Q ss_pred ecccccCCCCCCCcccEEEEecCCCCCcccccCCCcccccCCceEEEEeeCCCCceeeeccCCCceeceeEEecCCcEEE
Q 039705 254 LLPIKLQDPNSNAIRAEVLICGGAKPEAGVLAGKGEFMNALQDCGRIEITNKSATWQREMMPSPRVMGEMLLLPTGDVLI 333 (539)
Q Consensus 254 ~lpl~~~~~~~~~~~g~Iyv~GG~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~~M~~~R~~~~~vvlpdG~I~v 333 (539)
+.| +++.+++|+.+. .+..+|+......... .-..... .+....+|| +++
T Consensus 255 ~~~-----------~~~~l~~~~~d~----------------~i~i~d~~~~~~~~~~-~~~~~~i-~~~~~~~~~-~l~ 304 (425)
T 1r5m_A 255 FND-----------TNKLLLSASDDG----------------TLRIWHGGNGNSQNCF-YGHSQSI-VSASWVGDD-KVI 304 (425)
T ss_dssp EET-----------TTTEEEEEETTS----------------CEEEECSSSBSCSEEE-CCCSSCE-EEEEEETTT-EEE
T ss_pred ECC-----------CCCEEEEEcCCC----------------EEEEEECCCCccceEe-cCCCccE-EEEEECCCC-EEE
Confidence 211 566777777541 2455665421111111 1112222 233556788 777
Q ss_pred EcCcCCCCCCcccCCCCCCccEEEcCCCCCCCceEecCCCCCCccceeeEeeCCCCeEEEecCCC
Q 039705 334 INGAKKGTAGWNFATDPNTTPVLYEPDDPINERFSELTPTSKPRMCHSTSVVLPDGKILVAGSNP 398 (539)
Q Consensus 334 vGG~~~g~~g~~~~~~~~~~~e~YdP~t~~g~~Wt~~a~~~~~R~yhs~a~llpdG~V~v~GG~~ 398 (539)
+++.+ + .+.+||..+. +-...-... ...-....+.|||+++++|+.+
T Consensus 305 ~~~~d-~------------~i~i~d~~~~---~~~~~~~~~--~~~i~~~~~s~~~~~l~~~~~d 351 (425)
T 1r5m_A 305 SCSMD-G------------SVRLWSLKQN---TLLALSIVD--GVPIFAGRISQDGQKYAVAFMD 351 (425)
T ss_dssp EEETT-S------------EEEEEETTTT---EEEEEEECT--TCCEEEEEECTTSSEEEEEETT
T ss_pred EEeCC-C------------cEEEEECCCC---cEeEecccC--CccEEEEEEcCCCCEEEEEECC
Confidence 77654 2 5789998876 432211111 1112234567999999998853
No 99
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=96.72 E-value=0.26 Score=49.51 Aligned_cols=226 Identities=12% Similarity=0.105 Sum_probs=105.9
Q ss_pred eecCCCcEEEecCCCCCCCeEEEEeCCCCccceeeccc-cc-ccccccceeEEccCCcEEEEcCccCCeEEEE-ecCCCc
Q 039705 107 GLSANGTIVISGGWSSRGRSVRYLSGCYHACYWKEHHW-EL-SAKRWFSTQHILPDGSFIVVGGRREFSYEYI-LKEGKR 183 (539)
Q Consensus 107 ~~l~dG~l~v~GG~~~g~~~v~~ydP~~~t~~W~~~~~-~m-~~~R~y~s~~~L~dG~VyvvGG~~~~~~E~y-P~~~~~ 183 (539)
+..+|+++++.+.. ..+++||.. +.+-..... .. .....-.+++..+||+.++.|+.++ ++.+| ..+.
T Consensus 101 ~~s~d~~~l~~s~d----g~v~lWd~~--~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg-~v~iwd~~~~-- 171 (357)
T 4g56_B 101 AWVSEKGILVASDS----GAVELWEIL--EKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDF-SVKVWDLSQK-- 171 (357)
T ss_dssp EEETTTEEEEEETT----SCEEEC----------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTS-CEEEEETTTT--
T ss_pred EEcCCCCEEEEECC----CEEEEeecc--ccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCC-eEEEEECCCC--
Confidence 44678888776542 468999986 433221111 01 1112223455667999999888764 46677 4433
Q ss_pred ceeeccCccccCCCCCCCCcceEEEeeCC-cEEEEEcC--ceeEeeCCCCeEEEEcccCCCCCCccCCCccEEecccccC
Q 039705 184 IIYDLPILNETTNPSENNLYPFVFLSTDG-NLFIFAND--RSILLNPETNEILHVFPILRGGSRNYPASATSALLPIKLQ 260 (539)
Q Consensus 184 ~w~~~~~l~~~~~~~~~~~yp~~~~~~~G-~Iyv~Gg~--~~e~yDp~tn~W~~~~p~mp~~~r~yp~~g~av~lpl~~~ 260 (539)
+.. ..+....+ ..+ .+...+++ .+++.++. .+.+||.++.+-. ..+....... .-.++.+ .|
T Consensus 172 ~~~--~~~~~h~~----~v~-~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~---~~~~~~~~~~--~v~~v~~--sp- 236 (357)
T 4g56_B 172 AVL--KSYNAHSS----EVN-CVAACPGKDTIFLSCGEDGRILLWDTRKPKPA---TRIDFCASDT--IPTSVTW--HP- 236 (357)
T ss_dssp EEE--EEECCCSS----CEE-EEEECTTCSSCEEEEETTSCEEECCTTSSSCB---CBCCCTTCCS--CEEEEEE--CT-
T ss_pred cEE--EEEcCCCC----CEE-EEEEccCCCceeeeeccCCceEEEECCCCcee---eeeeeccccc--cccchhh--hh-
Confidence 221 11111111 000 11223455 46777764 4788998876533 1111100110 0112211 11
Q ss_pred CCCCCCcccEEEEecCCCCCcccccCCCcccccCCceEEEEeeCCCCceeeeccCCCceeceeEEecCC-cEEEEcCcCC
Q 039705 261 DPNSNAIRAEVLICGGAKPEAGVLAGKGEFMNALQDCGRIEITNKSATWQREMMPSPRVMGEMLLLPTG-DVLIINGAKK 339 (539)
Q Consensus 261 ~~~~~~~~g~Iyv~GG~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~~M~~~R~~~~~vvlpdG-~I~vvGG~~~ 339 (539)
.+++++++|+.+. .+..+|+.......+ ......... +...-||| ++++.|+.+
T Consensus 237 ------~~~~~la~g~~d~----------------~i~~wd~~~~~~~~~-~~~~~~~v~-~l~~sp~~~~~lasgs~D- 291 (357)
T 4g56_B 237 ------EKDDTFACGDETG----------------NVSLVNIKNPDSAQT-SAVHSQNIT-GLAYSYHSSPFLASISED- 291 (357)
T ss_dssp ------TSTTEEEEEESSS----------------CEEEEESSCGGGCEE-ECCCSSCEE-EEEECSSSSCCEEEEETT-
T ss_pred ------cccceEEEeeccc----------------ceeEEECCCCcEeEE-EeccceeEE-EEEEcCCCCCEEEEEeCC-
Confidence 2567888887651 355677643111111 122222222 22334677 567777655
Q ss_pred CCCCcccCCCCCCccEEEcCCCCCCCceEecCCCCCCccceeeEeeCC-CCeEEEecCCCC
Q 039705 340 GTAGWNFATDPNTTPVLYEPDDPINERFSELTPTSKPRMCHSTSVVLP-DGKILVAGSNPH 399 (539)
Q Consensus 340 g~~g~~~~~~~~~~~e~YdP~t~~g~~Wt~~a~~~~~R~yhs~a~llp-dG~V~v~GG~~~ 399 (539)
+ ++.+||.++. +-...-. ..... .....-| |++++++||.+.
T Consensus 292 ~------------~i~iwd~~~~---~~~~~~~-H~~~V--~~vafsP~d~~~l~s~s~Dg 334 (357)
T 4g56_B 292 C------------TVAVLDADFS---EVFRDLS-HRDFV--TGVAWSPLDHSKFTTVGWDH 334 (357)
T ss_dssp S------------CEEEECTTSC---EEEEECC-CSSCE--EEEEECSSSTTEEEEEETTS
T ss_pred C------------EEEEEECCCC---cEeEECC-CCCCE--EEEEEeCCCCCEEEEEcCCC
Confidence 2 5789998876 4332211 11111 1223456 899999998644
No 100
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=96.71 E-value=0.36 Score=47.21 Aligned_cols=90 Identities=9% Similarity=0.078 Sum_probs=49.5
Q ss_pred EEEEECCCCCEEe--CccCCCcccccceecCCCcEEEecCCCCCCCeEEEEeCCCCccceeecccccccccccceeEE--
Q 039705 82 AVEYDAESAAIRP--LKILTDTWSSSGGLSANGTIVISGGWSSRGRSVRYLSGCYHACYWKEHHWELSAKRWFSTQHI-- 157 (539)
Q Consensus 82 ~~~yDp~t~~w~~--l~~~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydP~~~t~~W~~~~~~m~~~R~y~s~~~-- 157 (539)
..+||..++.... ....+..........++|+.+++|+.+ ..+++||.. +.+..... .....-.+.+.
T Consensus 66 i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d---g~v~iwd~~--~~~~~~~~---~~~~~v~~~~~~~ 137 (368)
T 3mmy_A 66 VRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCD---KTAKMWDLS--SNQAIQIA---QHDAPVKTIHWIK 137 (368)
T ss_dssp EEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEETT---SEEEEEETT--TTEEEEEE---ECSSCEEEEEEEE
T ss_pred EEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcCC---CcEEEEEcC--CCCceeec---cccCceEEEEEEe
Confidence 5678887633221 111122222233456799999998763 579999987 55443321 11111122222
Q ss_pred ccCCcEEEEcCccCCeEEEE-ecC
Q 039705 158 LPDGSFIVVGGRREFSYEYI-LKE 180 (539)
Q Consensus 158 L~dG~VyvvGG~~~~~~E~y-P~~ 180 (539)
-++++.+++|+.++ .+.+| ..+
T Consensus 138 ~~~~~~l~~~~~dg-~i~vwd~~~ 160 (368)
T 3mmy_A 138 APNYSCVMTGSWDK-TLKFWDTRS 160 (368)
T ss_dssp CSSCEEEEEEETTS-EEEEECSSC
T ss_pred CCCCCEEEEccCCC-cEEEEECCC
Confidence 46888888888763 56677 443
No 101
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=96.70 E-value=0.08 Score=52.39 Aligned_cols=189 Identities=8% Similarity=0.007 Sum_probs=98.4
Q ss_pred eeEEccCCcEEEEcCccCCeEEEE-ecCCCcceeeccCccccCCCCCCCCcceEEEeeCCcEEEEEcC--ceeEeeCCCC
Q 039705 154 TQHILPDGSFIVVGGRREFSYEYI-LKEGKRIIYDLPILNETTNPSENNLYPFVFLSTDGNLFIFAND--RSILLNPETN 230 (539)
Q Consensus 154 s~~~L~dG~VyvvGG~~~~~~E~y-P~~~~~~w~~~~~l~~~~~~~~~~~yp~~~~~~~G~Iyv~Gg~--~~e~yDp~tn 230 (539)
+++.-+||+.+++|+.+ ..+.+| ..+. ++.....+..... . --.+...++|++++.|+. .+.+||..++
T Consensus 13 ~~~~s~~~~~l~~~~~d-~~v~i~~~~~~--~~~~~~~~~~h~~----~-v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~ 84 (372)
T 1k8k_C 13 CHAWNKDRTQIAICPNN-HEVHIYEKSGN--KWVQVHELKEHNG----Q-VTGVDWAPDSNRIVTCGTDRNAYVWTLKGR 84 (372)
T ss_dssp EEEECTTSSEEEEECSS-SEEEEEEEETT--EEEEEEEEECCSS----C-EEEEEEETTTTEEEEEETTSCEEEEEEETT
T ss_pred EEEECCCCCEEEEEeCC-CEEEEEeCCCC--cEEeeeeecCCCC----c-ccEEEEeCCCCEEEEEcCCCeEEEEECCCC
Confidence 34455689999888765 456777 5544 4322221211111 0 112234568999888875 4788999888
Q ss_pred eEEEEcccCCCCCCccCCCccEEecccccCCCCCCCcccEEEEecCCCCCcccccCCCcccccCCceEEEEeeCCCCcee
Q 039705 231 EILHVFPILRGGSRNYPASATSALLPIKLQDPNSNAIRAEVLICGGAKPEAGVLAGKGEFMNALQDCGRIEITNKSATWQ 310 (539)
Q Consensus 231 ~W~~~~p~mp~~~r~yp~~g~av~lpl~~~~~~~~~~~g~Iyv~GG~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~ 310 (539)
++.... .+.. .... .-..... .+++.+++|+.+ ..+..+|+.. ...|.
T Consensus 85 ~~~~~~-~~~~-~~~~--v~~~~~~-----------~~~~~l~~~~~d----------------~~v~i~d~~~-~~~~~ 132 (372)
T 1k8k_C 85 TWKPTL-VILR-INRA--ARCVRWA-----------PNEKKFAVGSGS----------------RVISICYFEQ-ENDWW 132 (372)
T ss_dssp EEEEEE-ECCC-CSSC--EEEEEEC-----------TTSSEEEEEETT----------------SSEEEEEEET-TTTEE
T ss_pred eeeeeE-Eeec-CCCc--eeEEEEC-----------CCCCEEEEEeCC----------------CEEEEEEecC-CCcce
Confidence 765322 1111 1110 0011221 156777887754 1355677764 33344
Q ss_pred ee-cc--CCCceeceeEEecCCcEEEEcCcCCCCCCcccCCCCCCccEEEcCCCC----------------CCCceEecC
Q 039705 311 RE-MM--PSPRVMGEMLLLPTGDVLIINGAKKGTAGWNFATDPNTTPVLYEPDDP----------------INERFSELT 371 (539)
Q Consensus 311 ~~-~M--~~~R~~~~~vvlpdG~I~vvGG~~~g~~g~~~~~~~~~~~e~YdP~t~----------------~g~~Wt~~a 371 (539)
.. .. .....-.+....||++.+++|+.+ + .+.+||.... .++.-..+.
T Consensus 133 ~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d-g------------~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (372)
T 1k8k_C 133 VCKHIKKPIRSTVLSLDWHPNSVLLAAGSCD-F------------KCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESS 199 (372)
T ss_dssp EEEEECTTCCSCEEEEEECTTSSEEEEEETT-S------------CEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECC
T ss_pred eeeeeecccCCCeeEEEEcCCCCEEEEEcCC-C------------CEEEEEcccccccccccccccccccchhhheEecC
Confidence 32 22 222222344557899999998865 2 5678885421 111111121
Q ss_pred CCCCCccceeeEeeCCCCeEEEecCCC
Q 039705 372 PTSKPRMCHSTSVVLPDGKILVAGSNP 398 (539)
Q Consensus 372 ~~~~~R~yhs~a~llpdG~V~v~GG~~ 398 (539)
. ... .-....+.|||+.+++|+.+
T Consensus 200 ~--~~~-~v~~~~~~~~~~~l~~~~~d 223 (372)
T 1k8k_C 200 S--SCG-WVHGVCFSANGSRVAWVSHD 223 (372)
T ss_dssp C--CSS-CEEEEEECSSSSEEEEEETT
T ss_pred C--CCC-eEEEEEECCCCCEEEEEeCC
Confidence 1 111 11234467899999998854
No 102
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=96.69 E-value=0.54 Score=46.47 Aligned_cols=62 Identities=16% Similarity=0.219 Sum_probs=38.9
Q ss_pred eecCCCcEEEecCCCCCCCeEEEEeCCCCccceeeccccccc-ccccceeEEccCCcEEEEcCccCCeEEEE
Q 039705 107 GLSANGTIVISGGWSSRGRSVRYLSGCYHACYWKEHHWELSA-KRWFSTQHILPDGSFIVVGGRREFSYEYI 177 (539)
Q Consensus 107 ~~l~dG~l~v~GG~~~g~~~v~~ydP~~~t~~W~~~~~~m~~-~R~y~s~~~L~dG~VyvvGG~~~~~~E~y 177 (539)
+..++++++++|+.+ ..+++||.. +.+... . +.. ...-.+++.-+||+.++.||.++ ++.+|
T Consensus 83 ~~~~~~~~l~s~s~D---~~v~lwd~~--~~~~~~--~-~~~h~~~v~~v~~sp~~~~l~s~~~d~-~i~~w 145 (343)
T 2xzm_R 83 ALSQENCFAISSSWD---KTLRLWDLR--TGTTYK--R-FVGHQSEVYSVAFSPDNRQILSAGAER-EIKLW 145 (343)
T ss_dssp EECSSTTEEEEEETT---SEEEEEETT--SSCEEE--E-EECCCSCEEEEEECSSTTEEEEEETTS-CEEEE
T ss_pred EECCCCCEEEEEcCC---CcEEEEECC--CCcEEE--E-EcCCCCcEEEEEECCCCCEEEEEcCCC-EEEEE
Confidence 445789999999863 689999987 543321 1 221 11222445566899988888764 45555
No 103
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=96.68 E-value=0.19 Score=47.28 Aligned_cols=81 Identities=12% Similarity=0.042 Sum_probs=50.2
Q ss_pred eEEEEECCCCCEEeCccCCCcccccceecCCCcEEEecCCCCCCCeEEEEeCCCCc-cceeecccccccccccceeEEcc
Q 039705 81 LAVEYDAESAAIRPLKILTDTWSSSGGLSANGTIVISGGWSSRGRSVRYLSGCYHA-CYWKEHHWELSAKRWFSTQHILP 159 (539)
Q Consensus 81 ~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydP~~~t-~~W~~~~~~m~~~R~y~s~~~L~ 159 (539)
...+||+.+++.+.+... ..........+||+.+++++. ..+.+||.. + .+...+.. ..........+.-+
T Consensus 23 ~i~~~d~~~~~~~~~~~~-~~~v~~~~~spdg~~l~~~~~----~~i~~~d~~--~~~~~~~~~~-~~~~~~~~~~~~sp 94 (297)
T 2ojh_A 23 SIEIFNIRTRKMRVVWQT-PELFEAPNWSPDGKYLLLNSE----GLLYRLSLA--GDPSPEKVDT-GFATICNNDHGISP 94 (297)
T ss_dssp EEEEEETTTTEEEEEEEE-SSCCEEEEECTTSSEEEEEET----TEEEEEESS--SCCSCEECCC-TTCCCBCSCCEECT
T ss_pred eEEEEeCCCCceeeeccC-CcceEeeEECCCCCEEEEEcC----CeEEEEeCC--CCCCceEecc-ccccccccceEECC
Confidence 467889988887755432 222223455689999998753 479999987 6 55554432 22112223445567
Q ss_pred CCcEEEEcCc
Q 039705 160 DGSFIVVGGR 169 (539)
Q Consensus 160 dG~VyvvGG~ 169 (539)
||+.+++++.
T Consensus 95 dg~~l~~~~~ 104 (297)
T 2ojh_A 95 DGALYAISDK 104 (297)
T ss_dssp TSSEEEEEEC
T ss_pred CCCEEEEEEe
Confidence 8988888774
No 104
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=96.55 E-value=0.17 Score=59.41 Aligned_cols=245 Identities=11% Similarity=0.047 Sum_probs=125.9
Q ss_pred EEEEECCCCCEEeCccCCCcccccceecCCCcEEEecCCCCCCCeEEEEeCCCCccceeecccccccccccceeEEccCC
Q 039705 82 AVEYDAESAAIRPLKILTDTWSSSGGLSANGTIVISGGWSSRGRSVRYLSGCYHACYWKEHHWELSAKRWFSTQHILPDG 161 (539)
Q Consensus 82 ~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydP~~~t~~W~~~~~~m~~~R~y~s~~~L~dG 161 (539)
..+||..+++.......+......-+..+||+.+++|+.+ ..+++||.. +.+...... ....-.+.+..+++
T Consensus 985 i~i~d~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~d---g~i~vwd~~--~~~~~~~~~---~~~~v~~~~~~~~~ 1056 (1249)
T 3sfz_A 985 IKIIELPNNRVFSSGVGHKKAVRHIQFTADGKTLISSSED---SVIQVWNWQ--TGDYVFLQA---HQETVKDFRLLQDS 1056 (1249)
T ss_dssp CEEEETTTTSCEEECCCCSSCCCCEEECSSSSCEEEECSS---SBEEEEETT--TTEEECCBC---CSSCEEEEEECSSS
T ss_pred EEEEEcCCCceeeecccCCCceEEEEECCCCCEEEEEcCC---CEEEEEECC--CCceEEEec---CCCcEEEEEEcCCC
Confidence 4578887766544333333333334556899999998863 578999987 655543221 22222334455566
Q ss_pred cEEEEcCccCCeEEEE-ecCCCcce-eeccCccccCCCCCCCCcceEEEeeCCcEEEEEcC--ceeEeeCCCCeEEEEcc
Q 039705 162 SFIVVGGRREFSYEYI-LKEGKRII-YDLPILNETTNPSENNLYPFVFLSTDGNLFIFAND--RSILLNPETNEILHVFP 237 (539)
Q Consensus 162 ~VyvvGG~~~~~~E~y-P~~~~~~w-~~~~~l~~~~~~~~~~~yp~~~~~~~G~Iyv~Gg~--~~e~yDp~tn~W~~~~p 237 (539)
++ ++|+.+ .++.+| ..+. +. .... .... . --.+...++|+.++.|+. .+.+||..+.+- +.
T Consensus 1057 ~l-~~~~~d-g~v~vwd~~~~--~~~~~~~---~~~~----~-v~~~~~s~d~~~l~s~s~d~~v~iwd~~~~~~---~~ 1121 (1249)
T 3sfz_A 1057 RL-LSWSFD-GTVKVWNVITG--RIERDFT---CHQG----T-VLSCAISSDATKFSSTSADKTAKIWSFDLLSP---LH 1121 (1249)
T ss_dssp EE-EEEESS-SEEEEEETTTT--CCCEEEE---CCSS----C-CCCEEECSSSSSCEEECCSSCCCEECSSSSSC---SB
T ss_pred cE-EEEECC-CcEEEEECCCC--ceeEEEc---ccCC----c-EEEEEECCCCCEEEEEcCCCcEEEEECCCcce---ee
Confidence 54 455544 456677 4332 21 1111 1000 0 012345679998888875 467888876542 22
Q ss_pred cCCCCCCccCCCccEEecccccCCCCCCCcccEEEEecCCCCCcccccCCCcccccCCceEEEEeeCCCCceeeec----
Q 039705 238 ILRGGSRNYPASATSALLPIKLQDPNSNAIRAEVLICGGAKPEAGVLAGKGEFMNALQDCGRIEITNKSATWQREM---- 313 (539)
Q Consensus 238 ~mp~~~r~yp~~g~av~lpl~~~~~~~~~~~g~Iyv~GG~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~~---- 313 (539)
.+.+ . .+....+... .+++++++|+.+. .+..+|+..........+
T Consensus 1122 ~l~~-h-----~~~v~~~~~s--------~dg~~lat~~~dg----------------~i~vwd~~~~~~~~~~~~~~~~ 1171 (1249)
T 3sfz_A 1122 ELKG-H-----NGCVRCSAFS--------LDGILLATGDDNG----------------EIRIWNVSDGQLLHSCAPISVE 1171 (1249)
T ss_dssp CCCC-C-----SSCEEEEEEC--------SSSSEEEEEETTS----------------CCCEEESSSSCCCCCCCCCC--
T ss_pred eecc-C-----CCcEEEEEEC--------CCCCEEEEEeCCC----------------EEEEEECCCCceEEEecccccc
Confidence 2222 1 1111111112 2788888888652 234566543111111100
Q ss_pred ---cCCCceeceeEEecCCcEEEEcCcCCCCCCcccCCCCCCccEEEcCCCCCCCceEecCCCCCCccceeeEeeCCCCe
Q 039705 314 ---MPSPRVMGEMLLLPTGDVLIINGAKKGTAGWNFATDPNTTPVLYEPDDPINERFSELTPTSKPRMCHSTSVVLPDGK 390 (539)
Q Consensus 314 ---M~~~R~~~~~vvlpdG~I~vvGG~~~g~~g~~~~~~~~~~~e~YdP~t~~g~~Wt~~a~~~~~R~yhs~a~llpdG~ 390 (539)
......-.+....|||+.++.+| | ++.+||..+. +-...-....... ....+.|||+
T Consensus 1172 ~~~~~~~~~v~~l~fs~dg~~l~s~~---g------------~v~vwd~~~g---~~~~~~~~~~~~i--~~~~~s~dg~ 1231 (1249)
T 3sfz_A 1172 EGTATHGGWVTDVCFSPDSKTLVSAG---G------------YLKWWNVATG---DSSQTFYTNGTNL--KKIHVSPDFR 1231 (1249)
T ss_dssp -----CCSCCCEEEECTTSSCEEEES---S------------SEEEBCSSSC---BCCCCCCCSSCCC--CCCEECSSSC
T ss_pred ccccccCceEEEEEECCCCCEEEECC---C------------eEEEEECCCC---ceeeeeeccCCcc--cEEEECCCCC
Confidence 11111112334568999998876 1 4789998876 3321111111111 1234679999
Q ss_pred EEEecCCCC
Q 039705 391 ILVAGSNPH 399 (539)
Q Consensus 391 V~v~GG~~~ 399 (539)
.+++|+...
T Consensus 1232 ~l~~~~~dg 1240 (1249)
T 3sfz_A 1232 TYVTVDNLG 1240 (1249)
T ss_dssp CEEEECTTC
T ss_pred EEEEecCCc
Confidence 999988643
No 105
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=96.53 E-value=0.64 Score=45.01 Aligned_cols=223 Identities=13% Similarity=0.153 Sum_probs=105.5
Q ss_pred eecCCCcEEEecCCCCCCCeEEEEeCCCCccceeecccccccccccceeEEccCCcEEEEcCccCCeEEEE-ecCCCcce
Q 039705 107 GLSANGTIVISGGWSSRGRSVRYLSGCYHACYWKEHHWELSAKRWFSTQHILPDGSFIVVGGRREFSYEYI-LKEGKRII 185 (539)
Q Consensus 107 ~~l~dG~l~v~GG~~~g~~~v~~ydP~~~t~~W~~~~~~m~~~R~y~s~~~L~dG~VyvvGG~~~~~~E~y-P~~~~~~w 185 (539)
...+||+++++|+.+ ..+.+++.. ......... .............+++.++.|+.+. .+.+| .... .-
T Consensus 93 ~~s~dg~~l~s~~~d---~~i~~~~~~--~~~~~~~~~--~~~~~~~~~~~~~~~~~l~s~s~d~-~~~~~d~~~~--~~ 162 (340)
T 4aow_A 93 VISSDGQFALSGSWD---GTLRLWDLT--TGTTTRRFV--GHTKDVLSVAFSSDNRQIVSGSRDK-TIKLWNTLGV--CK 162 (340)
T ss_dssp EECTTSSEEEEEETT---SEEEEEETT--TTEEEEEEE--CCSSCEEEEEECTTSSCEEEEETTS-CEEEECTTSC--EE
T ss_pred EECCCCCEEEEEccc---ccceEEeec--ccceeeeec--CCCCceeEEEEeecCccceeecCCC-eEEEEEeCCC--ce
Confidence 456799999999863 568888876 333322211 1112222334455788888887654 34455 2221 11
Q ss_pred eeccCccccCCCCCCCCcceEEEee--CCcEEEEEcC--ceeEeeCCCCeEEEEcccCCCCCCccCCCccEEecccccCC
Q 039705 186 YDLPILNETTNPSENNLYPFVFLST--DGNLFIFAND--RSILLNPETNEILHVFPILRGGSRNYPASATSALLPIKLQD 261 (539)
Q Consensus 186 ~~~~~l~~~~~~~~~~~yp~~~~~~--~G~Iyv~Gg~--~~e~yDp~tn~W~~~~p~mp~~~r~yp~~g~av~lpl~~~~ 261 (539)
.... +....+ . -......+ ...+++.++. .+.+||..+.+....+ .. .... --+..+-
T Consensus 163 ~~~~-~~~~~~----~-v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~~~~~---~~-h~~~--v~~~~~s------ 224 (340)
T 4aow_A 163 YTVQ-DESHSE----W-VSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNH---IG-HTGY--LNTVTVS------ 224 (340)
T ss_dssp EEEC-SSSCSS----C-EEEEEECSCSSSCEEEEEETTSCEEEEETTTTEEEEEE---CC-CSSC--EEEEEEC------
T ss_pred EEEE-eccccC----c-ccceEEccCCCCcEEEEEcCCCEEEEEECCCCceeeEe---cC-CCCc--EEEEEEC------
Confidence 1111 111000 0 00111222 2456666664 4778999988765332 21 1110 0011221
Q ss_pred CCCCCcccEEEEecCCCCCcccccCCCcccccCCceEEEEeeCCCCceeee-ccCCCceeceeEEecCCcEEEEcCcCCC
Q 039705 262 PNSNAIRAEVLICGGAKPEAGVLAGKGEFMNALQDCGRIEITNKSATWQRE-MMPSPRVMGEMLLLPTGDVLIINGAKKG 340 (539)
Q Consensus 262 ~~~~~~~g~Iyv~GG~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~-~M~~~R~~~~~vvlpdG~I~vvGG~~~g 340 (539)
.+++++++|+.+. .+..+|+.. +... .+.....-......+++.+++ ++.+ +
T Consensus 225 -----~~~~~l~s~s~Dg----------------~i~iwd~~~----~~~~~~~~~~~~v~~~~~~~~~~~~~-~~~d-~ 277 (340)
T 4aow_A 225 -----PDGSLCASGGKDG----------------QAMLWDLNE----GKHLYTLDGGDIINALCFSPNRYWLC-AATG-P 277 (340)
T ss_dssp -----TTSSEEEEEETTC----------------EEEEEETTT----TEEEEEEECSSCEEEEEECSSSSEEE-EEET-T
T ss_pred -----CCCCEEEEEeCCC----------------eEEEEEecc----CceeeeecCCceEEeeecCCCCceee-ccCC-C
Confidence 1678888888652 244566532 2221 221111122223456666554 5443 1
Q ss_pred CCCcccCCCCCCccEEEcCCCCCCCceE-ecCC--CCCCccce----eeEeeCCCCeEEEecCCCC
Q 039705 341 TAGWNFATDPNTTPVLYEPDDPINERFS-ELTP--TSKPRMCH----STSVVLPDGKILVAGSNPH 399 (539)
Q Consensus 341 ~~g~~~~~~~~~~~e~YdP~t~~g~~Wt-~~a~--~~~~R~yh----s~a~llpdG~V~v~GG~~~ 399 (539)
++.+||.++. .-. .+.. .......| ....+.|||+.+++||.+.
T Consensus 278 ------------~i~iwd~~~~---~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~Dg 328 (340)
T 4aow_A 278 ------------SIKIWDLEGK---IIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDN 328 (340)
T ss_dssp ------------EEEEEETTTT---EEEEEECCC-------CCCCCEEEEEECTTSSEEEEEETTS
T ss_pred ------------EEEEEECCCC---eEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEEeCCC
Confidence 5788888765 321 1111 00011112 1234579999999998754
No 106
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=96.53 E-value=0.4 Score=49.30 Aligned_cols=245 Identities=15% Similarity=0.134 Sum_probs=119.2
Q ss_pred EEEEECCCCCEEeCccCCCcccccceecCCCcEEEecCCCCCCCeEEEEeCCCCccceeecccccccccccc-eeEEc--
Q 039705 82 AVEYDAESAAIRPLKILTDTWSSSGGLSANGTIVISGGWSSRGRSVRYLSGCYHACYWKEHHWELSAKRWFS-TQHIL-- 158 (539)
Q Consensus 82 ~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydP~~~t~~W~~~~~~m~~~R~y~-s~~~L-- 158 (539)
..+||..+.+....-..+......-....++ ++++|+.+ ..+.+||.. +.+-.. . +......- +....
T Consensus 144 i~vwd~~~~~~~~~~~~h~~~V~~l~~~~~~-~l~s~s~d---g~i~vwd~~--~~~~~~--~-~~~h~~~v~~l~~~~~ 214 (464)
T 3v7d_B 144 IRVYDSINKKFLLQLSGHDGGVWALKYAHGG-ILVSGSTD---RTVRVWDIK--KGCCTH--V-FEGHNSTVRCLDIVEY 214 (464)
T ss_dssp EEEEETTTTEEEEEECCCSSCEEEEEECSTT-EEEEEETT---SCEEEEETT--TTEEEE--E-ECCCSSCEEEEEEEES
T ss_pred EEEEECCCCcEEEEEeCCCcCEEEEEEcCCC-EEEEEeCC---CCEEEEECC--CCcEEE--E-ECCCCCccEEEEEecC
Confidence 5678887765433222222211112233455 77777653 578999987 443221 1 22111111 12222
Q ss_pred cCCcEEEEcCccCCeEEEE-ecCCCcceee---------------ccCccccCCCCCCCCcceEEEeeCCcEEEEEcC--
Q 039705 159 PDGSFIVVGGRREFSYEYI-LKEGKRIIYD---------------LPILNETTNPSENNLYPFVFLSTDGNLFIFAND-- 220 (539)
Q Consensus 159 ~dG~VyvvGG~~~~~~E~y-P~~~~~~w~~---------------~~~l~~~~~~~~~~~yp~~~~~~~G~Iyv~Gg~-- 220 (539)
.+++.++.|+.++ ++.+| ..+....... .+.+...... ...+...+.+++++++.|+.
T Consensus 215 ~~~~~l~s~s~d~-~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~v~~~~~~~~~l~~~~~d~ 290 (464)
T 3v7d_B 215 KNIKYIVTGSRDN-TLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRG---HMASVRTVSGHGNIVVSGSYDN 290 (464)
T ss_dssp SSCEEEEEEETTS-CEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECC---CSSCEEEEEEETTEEEEEETTS
T ss_pred CCCCEEEEEcCCC-cEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccC---ccceEEEEcCCCCEEEEEeCCC
Confidence 4778888887664 44555 3222000000 0000000000 01123345678888888875
Q ss_pred ceeEeeCCCCeEEEEcccCCCCCCccCCCccEEecccccCCCCCCCcccEEEEecCCCCCcccccCCCcccccCCceEEE
Q 039705 221 RSILLNPETNEILHVFPILRGGSRNYPASATSALLPIKLQDPNSNAIRAEVLICGGAKPEAGVLAGKGEFMNALQDCGRI 300 (539)
Q Consensus 221 ~~e~yDp~tn~W~~~~p~mp~~~r~yp~~g~av~lpl~~~~~~~~~~~g~Iyv~GG~~~~~~~~~~~~~~~~a~~s~~~~ 300 (539)
.+.+||..+.+-...+ .. .... .-...+- .+++.+++|+.+. .+..+
T Consensus 291 ~i~vwd~~~~~~~~~~---~~-~~~~--v~~~~~~-----------~~~~~l~sg~~dg----------------~i~vw 337 (464)
T 3v7d_B 291 TLIVWDVAQMKCLYIL---SG-HTDR--IYSTIYD-----------HERKRCISASMDT----------------TIRIW 337 (464)
T ss_dssp CEEEEETTTTEEEEEE---CC-CSSC--EEEEEEE-----------TTTTEEEEEETTS----------------CEEEE
T ss_pred eEEEEECCCCcEEEEe---cC-CCCC--EEEEEEc-----------CCCCEEEEEeCCC----------------cEEEE
Confidence 4788999887755333 21 1110 0011221 1567778887651 35567
Q ss_pred EeeCCCCceeee-ccCCCceeceeEEecCCcEEEEcCcCCCCCCcccCCCCCCccEEEcCCCCCCCceEecCCCCCCccc
Q 039705 301 EITNKSATWQRE-MMPSPRVMGEMLLLPTGDVLIINGAKKGTAGWNFATDPNTTPVLYEPDDPINERFSELTPTSKPRMC 379 (539)
Q Consensus 301 d~~~~~~~W~~~-~M~~~R~~~~~vvlpdG~I~vvGG~~~g~~g~~~~~~~~~~~e~YdP~t~~g~~Wt~~a~~~~~R~y 379 (539)
|+.. . +.. .+.........+.. +++.+++|+.+ | ++.+||..+. +-..... ....
T Consensus 338 d~~~--~--~~~~~~~~h~~~v~~~~~-~~~~l~s~s~d-g------------~v~vwd~~~~---~~~~~~~--~~~~- 393 (464)
T 3v7d_B 338 DLEN--G--ELMYTLQGHTALVGLLRL-SDKFLVSAAAD-G------------SIRGWDANDY---SRKFSYH--HTNL- 393 (464)
T ss_dssp ETTT--T--EEEEEECCCSSCEEEEEE-CSSEEEEEETT-S------------EEEEEETTTC---CEEEEEE--CTTC-
T ss_pred ECCC--C--cEEEEEeCCCCcEEEEEE-cCCEEEEEeCC-C------------cEEEEECCCC---ceeeeec--CCCC-
Confidence 7642 2 221 22222222233444 78888888865 2 5789999876 3221111 1111
Q ss_pred eeeEeeCCCCeEEEecC
Q 039705 380 HSTSVVLPDGKILVAGS 396 (539)
Q Consensus 380 hs~a~llpdG~V~v~GG 396 (539)
.....+.+||+++++|+
T Consensus 394 ~~~~~~~~~~~~l~~~~ 410 (464)
T 3v7d_B 394 SAITTFYVSDNILVSGS 410 (464)
T ss_dssp CCEEEEEECSSEEEEEE
T ss_pred ccEEEEEeCCCEEEEec
Confidence 12345668999999987
No 107
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=96.50 E-value=0.31 Score=49.42 Aligned_cols=137 Identities=20% Similarity=0.203 Sum_probs=71.2
Q ss_pred EEEEECCCCCEEeCccCCCcccccceecCCCcEEEecCCCCCCCeEEEEeCCCCccceeecccccccccccceeEEcc-C
Q 039705 82 AVEYDAESAAIRPLKILTDTWSSSGGLSANGTIVISGGWSSRGRSVRYLSGCYHACYWKEHHWELSAKRWFSTQHILP-D 160 (539)
Q Consensus 82 ~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydP~~~t~~W~~~~~~m~~~R~y~s~~~L~-d 160 (539)
..+||..+.+....-..+..........++|..+++|+.+ ..+++||.. +.+.... +.....-.+.+..+ |
T Consensus 147 i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d---~~v~iwd~~--~~~~~~~---~~~~~~v~~~~~~~~~ 218 (393)
T 1erj_A 147 IRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGD---RTVRIWDLR--TGQCSLT---LSIEDGVTTVAVSPGD 218 (393)
T ss_dssp EEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETT---SEEEEEETT--TTEEEEE---EECSSCEEEEEECSTT
T ss_pred EEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCC---CcEEEEECC--CCeeEEE---EEcCCCcEEEEEECCC
Confidence 6688988776544333333222233456789999998763 689999987 5443221 22222222344444 8
Q ss_pred CcEEEEcCccCCeEEEE-ecCCCccee-eccCccccCCCCCCCCcceEEEeeCCcEEEEEcCc--eeEeeCCCC
Q 039705 161 GSFIVVGGRREFSYEYI-LKEGKRIIY-DLPILNETTNPSENNLYPFVFLSTDGNLFIFANDR--SILLNPETN 230 (539)
Q Consensus 161 G~VyvvGG~~~~~~E~y-P~~~~~~w~-~~~~l~~~~~~~~~~~yp~~~~~~~G~Iyv~Gg~~--~e~yDp~tn 230 (539)
|+++++|+.++ .+.+| ..+. ... ................+ .+...++|+.++.|+.+ +.+||..+.
T Consensus 219 ~~~l~~~s~d~-~v~iwd~~~~--~~~~~~~~~~~~~~~h~~~v~-~v~~~~~g~~l~s~s~d~~v~~wd~~~~ 288 (393)
T 1erj_A 219 GKYIAAGSLDR-AVRVWDSETG--FLVERLDSENESGTGHKDSVY-SVVFTRDGQSVVSGSLDRSVKLWNLQNA 288 (393)
T ss_dssp CCEEEEEETTS-CEEEEETTTC--CEEEEEC------CCCSSCEE-EEEECTTSSEEEEEETTSEEEEEEC---
T ss_pred CCEEEEEcCCC-cEEEEECCCC--cEEEeecccccCCCCCCCCEE-EEEECCCCCEEEEEeCCCEEEEEECCCC
Confidence 89999888764 46677 4433 211 11100000000000111 12334689998888754 678887654
No 108
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=96.47 E-value=0.32 Score=48.73 Aligned_cols=226 Identities=12% Similarity=0.107 Sum_probs=110.0
Q ss_pred eecCCCcEEEecCCCCCCCeEEEEeCCCCccceeeccc-ccc-cccccceeEEccCCcEEEEcCccCCeEEEE-ecCCCc
Q 039705 107 GLSANGTIVISGGWSSRGRSVRYLSGCYHACYWKEHHW-ELS-AKRWFSTQHILPDGSFIVVGGRREFSYEYI-LKEGKR 183 (539)
Q Consensus 107 ~~l~dG~l~v~GG~~~g~~~v~~ydP~~~t~~W~~~~~-~m~-~~R~y~s~~~L~dG~VyvvGG~~~~~~E~y-P~~~~~ 183 (539)
+..+|++++ +|+. ...+++||.. +++-..... .+. ....-.+++..+||+.++.|+.++ ++.+| ..++
T Consensus 89 ~~s~d~~l~-~~s~---dg~v~lWd~~--~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~-~i~iwd~~~~-- 159 (344)
T 4gqb_B 89 TWVGERGIL-VASD---SGAVELWELD--ENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDI-CIKVWDLAQQ-- 159 (344)
T ss_dssp EEETTTEEE-EEET---TSEEEEEEEC--TTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTS-CEEEEETTTT--
T ss_pred EEeCCCeEE-EEEC---CCEEEEEecc--CCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCC-eEEEEECCCC--
Confidence 335676654 5554 2579999987 443211111 011 112223455667999999888764 56677 4433
Q ss_pred ceeeccCccccCCCCCCCCcceEEEeeCC-cEEEEEcC--ceeEeeCCCCeEEEEcccCCCCCCccCCCccEEecccccC
Q 039705 184 IIYDLPILNETTNPSENNLYPFVFLSTDG-NLFIFAND--RSILLNPETNEILHVFPILRGGSRNYPASATSALLPIKLQ 260 (539)
Q Consensus 184 ~w~~~~~l~~~~~~~~~~~yp~~~~~~~G-~Iyv~Gg~--~~e~yDp~tn~W~~~~p~mp~~~r~yp~~g~av~lpl~~~ 260 (539)
+-. ..+....+ ..+ .....+++ .+++.|+. .+.+||.++.+-...+.. .. ..+. .-+....|
T Consensus 160 ~~~--~~~~~h~~----~V~-~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~-~~--~~~~-~~~~~~~p---- 224 (344)
T 4gqb_B 160 VVL--SSYRAHAA----QVT-CVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGC-SA--PGYL-PTSLAWHP---- 224 (344)
T ss_dssp EEE--EEECCCSS----CEE-EEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC-------CCC-EEEEEECS----
T ss_pred cEE--EEEcCcCC----ceE-EEEecCCCCCceeeeccccccccccccccceeeeeec-ce--eecc-ceeeeecC----
Confidence 221 11111111 000 11223566 58888764 578899988765432211 11 1110 00112212
Q ss_pred CCCCCCcccEEEEecCCCCCcccccCCCcccccCCceEEEEeeCCCCceeeeccCCCceeceeEEecCC-cEEEEcCcCC
Q 039705 261 DPNSNAIRAEVLICGGAKPEAGVLAGKGEFMNALQDCGRIEITNKSATWQREMMPSPRVMGEMLLLPTG-DVLIINGAKK 339 (539)
Q Consensus 261 ~~~~~~~~g~Iyv~GG~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~~M~~~R~~~~~vvlpdG-~I~vvGG~~~ 339 (539)
.+++++++|+.+. .+..+|+.......+. .-+..... +...-||| ++++.|+.+
T Consensus 225 ------~~~~~l~sg~~dg----------------~v~~wd~~~~~~~~~~-~~h~~~v~-~v~fsp~g~~~lasgs~D- 279 (344)
T 4gqb_B 225 ------QQSEVFVFGDENG----------------TVSLVDTKSTSCVLSS-AVHSQCVT-GLVFSPHSVPFLASLSED- 279 (344)
T ss_dssp ------SCTTEEEEEETTS----------------EEEEEESCC--CCEEE-ECCSSCEE-EEEECSSSSCCEEEEETT-
T ss_pred ------CCCcceEEeccCC----------------cEEEEECCCCcEEEEE-cCCCCCEE-EEEEccCCCeEEEEEeCC-
Confidence 2577888887651 3556776431111111 11122222 22345787 577777765
Q ss_pred CCCCcccCCCCCCccEEEcCCCCCCCceEecCCCCCCccceeeEeeCCCCe-EEEecCCCC
Q 039705 340 GTAGWNFATDPNTTPVLYEPDDPINERFSELTPTSKPRMCHSTSVVLPDGK-ILVAGSNPH 399 (539)
Q Consensus 340 g~~g~~~~~~~~~~~e~YdP~t~~g~~Wt~~a~~~~~R~yhs~a~llpdG~-V~v~GG~~~ 399 (539)
+ ++.+||.++. +-..+.. ..... .....-|||+ +++.||.++
T Consensus 280 ~------------~i~vwd~~~~---~~~~~~~-H~~~V--~~v~~sp~~~~llas~s~D~ 322 (344)
T 4gqb_B 280 C------------SLAVLDSSLS---ELFRSQA-HRDFV--RDATWSPLNHSLLTTVGWDH 322 (344)
T ss_dssp S------------CEEEECTTCC---EEEEECC-CSSCE--EEEEECSSSTTEEEEEETTS
T ss_pred C------------eEEEEECCCC---cEEEEcC-CCCCE--EEEEEeCCCCeEEEEEcCCC
Confidence 2 6789998877 4333211 01111 1233568875 777888644
No 109
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=96.46 E-value=0.12 Score=50.76 Aligned_cols=207 Identities=14% Similarity=0.106 Sum_probs=103.5
Q ss_pred CCcEEEecCCCCCCCeEEEEeCCCCccceeeccccccccc-ccceeEEccC--CcEEEEcCccCCeEEEE-ecCCCccee
Q 039705 111 NGTIVISGGWSSRGRSVRYLSGCYHACYWKEHHWELSAKR-WFSTQHILPD--GSFIVVGGRREFSYEYI-LKEGKRIIY 186 (539)
Q Consensus 111 dG~l~v~GG~~~g~~~v~~ydP~~~t~~W~~~~~~m~~~R-~y~s~~~L~d--G~VyvvGG~~~~~~E~y-P~~~~~~w~ 186 (539)
+|.++++|+.+ ..+++||.. +.+|..... +.... .-.+++.-++ |++++.|+.++ ++.+| .... ..|.
T Consensus 70 ~~~~l~s~s~D---~~v~iWd~~--~~~~~~~~~-~~~h~~~V~~v~~~p~~~g~~lasgs~D~-~i~lwd~~~~-~~~~ 141 (316)
T 3bg1_A 70 YGNILASCSYD---RKVIIWREE--NGTWEKSHE-HAGHDSSVNSVCWAPHDYGLILACGSSDG-AISLLTYTGE-GQWE 141 (316)
T ss_dssp GSSCEEEEETT---SCEEEECCS--SSCCCEEEE-ECCCSSCCCEEEECCTTTCSCEEEECSSS-CEEEEEECSS-SCEE
T ss_pred CCCEEEEEECC---CEEEEEECC--CCcceEEEE-ccCCCCceEEEEECCCCCCcEEEEEcCCC-CEEEEecCCC-CCcc
Confidence 48888998863 679999998 666654432 32211 2223344445 78888888764 45566 3321 1343
Q ss_pred eccCccccCCCCCCCCcceEEEee-----------------CCcEEEEEcC--ceeEeeCCC-CeEEEEcccCCCCCCcc
Q 039705 187 DLPILNETTNPSENNLYPFVFLST-----------------DGNLFIFAND--RSILLNPET-NEILHVFPILRGGSRNY 246 (539)
Q Consensus 187 ~~~~l~~~~~~~~~~~yp~~~~~~-----------------~G~Iyv~Gg~--~~e~yDp~t-n~W~~~~p~mp~~~r~y 246 (539)
....+...... .. ...-.+ ++++++.|+. .+.+||..+ +.|. .+..+.+ ....
T Consensus 142 ~~~~~~~h~~~----v~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~-~~~~l~~-h~~~ 214 (316)
T 3bg1_A 142 VKKINNAHTIG----CN-AVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWK-EEQKLEA-HSDW 214 (316)
T ss_dssp ECCBTTSSSSC----BC-CCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEE-EEECCBC-CSSC
T ss_pred eeeeeccccCC----cc-eEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccc-eeeeccc-CCCc
Confidence 21111111000 00 001111 2567787775 467888864 4464 3434433 1110
Q ss_pred CCCccEEecccccCCCCCCCcccEEEEecCCCCCcccccCCCcccccCCceEEEEeeCC-CCceeee--ccCCCceecee
Q 039705 247 PASATSALLPIKLQDPNSNAIRAEVLICGGAKPEAGVLAGKGEFMNALQDCGRIEITNK-SATWQRE--MMPSPRVMGEM 323 (539)
Q Consensus 247 p~~g~av~lpl~~~~~~~~~~~g~Iyv~GG~~~~~~~~~~~~~~~~a~~s~~~~d~~~~-~~~W~~~--~M~~~R~~~~~ 323 (539)
--....-| .. ..++++++.|+.+. ++..+|+... ...|... .-...... +.
T Consensus 215 --V~~v~~sp------~~-~~~~~~las~s~D~----------------~v~iw~~~~~~~~~~~~~~~~~~~~~v~-~v 268 (316)
T 3bg1_A 215 --VRDVAWAP------SI-GLPTSTIASCSQDG----------------RVFIWTCDDASSNTWSPKLLHKFNDVVW-HV 268 (316)
T ss_dssp --EEEEECCC------CS-SCSCCEEEEEETTC----------------EEEEEECSSTTCCCCBCCEEEECSSCEE-EE
T ss_pred --eEEEEecC------CC-CCCCceEEEEcCCC----------------eEEEEEccCccccchhhhhhhcCCCcEE-EE
Confidence 00111111 00 01247788887651 3455666431 1334432 11122333 23
Q ss_pred EEecCCcEEEEcCcCCCCCCcccCCCCCCccEEEcCCCCCCCceEecCCC
Q 039705 324 LLLPTGDVLIINGAKKGTAGWNFATDPNTTPVLYEPDDPINERFSELTPT 373 (539)
Q Consensus 324 vvlpdG~I~vvGG~~~g~~g~~~~~~~~~~~e~YdP~t~~g~~Wt~~a~~ 373 (539)
..-|||++++.||.+ + ++.+||...+ .+|..+..+
T Consensus 269 ~~sp~g~~las~~~D-~------------~v~lw~~~~~--g~~~~~~~~ 303 (316)
T 3bg1_A 269 SWSITANILAVSGGD-N------------KVTLWKESVD--GQWVCISDV 303 (316)
T ss_dssp EECTTTCCEEEEESS-S------------CEEEEEECTT--SCEEEEEEC
T ss_pred EEcCCCCEEEEEcCC-C------------eEEEEEECCC--CcEEEeeec
Confidence 446899999999876 2 5789997643 178765443
No 110
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=96.45 E-value=0.092 Score=58.80 Aligned_cols=233 Identities=12% Similarity=0.152 Sum_probs=119.5
Q ss_pred EEEEECCCCCEEeCccC--CCcccccceecCC--CcEEEecCCCCCCCeEEEEeCCCCccceeecccccccc-cccceeE
Q 039705 82 AVEYDAESAAIRPLKIL--TDTWSSSGGLSAN--GTIVISGGWSSRGRSVRYLSGCYHACYWKEHHWELSAK-RWFSTQH 156 (539)
Q Consensus 82 ~~~yDp~t~~w~~l~~~--~~~~c~~~~~l~d--G~l~v~GG~~~g~~~v~~ydP~~~t~~W~~~~~~m~~~-R~y~s~~ 156 (539)
..+||..++++..+... +......-...++ |..+++|+.+ ..+.+||.. +.+|..... +... ..-.+++
T Consensus 33 I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~D---g~I~vwd~~--~~~~~~~~~-~~~h~~~V~~v~ 106 (753)
T 3jro_A 33 IKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYD---GKVLIWKEE--NGRWSQIAV-HAVHSASVNSVQ 106 (753)
T ss_dssp EEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETT---SCEEEEEEE--TTEEEEEEE-ECCCSSCEEEEE
T ss_pred EEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCC---CeEEEEECC--CCccccccc-ccCCCCCeEEEE
Confidence 55777766666554332 2111112233355 8999999863 578999987 776655543 3322 2222344
Q ss_pred EccC--CcEEEEcCccCCeEEEE-ecCCCcceeeccCccccCCCCCCCCcceEEEee-------------CCcEEEEEcC
Q 039705 157 ILPD--GSFIVVGGRREFSYEYI-LKEGKRIIYDLPILNETTNPSENNLYPFVFLST-------------DGNLFIFAND 220 (539)
Q Consensus 157 ~L~d--G~VyvvGG~~~~~~E~y-P~~~~~~w~~~~~l~~~~~~~~~~~yp~~~~~~-------------~G~Iyv~Gg~ 220 (539)
..++ |+++++|+.++ .+.+| .... ....... +..... ... .....+ +|++++.|+.
T Consensus 107 ~sp~~~~~~l~sgs~dg-~I~vwdl~~~-~~~~~~~-~~~~~~----~v~-~l~~~p~~~~~~~~~~~~~d~~~l~sgs~ 178 (753)
T 3jro_A 107 WAPHEYGPLLLVASSDG-KVSVVEFKEN-GTTSPII-IDAHAI----GVN-SASWAPATIEEDGEHNGTKESRKFVTGGA 178 (753)
T ss_dssp ECCGGGCSEEEEEETTS-EEEEEECCSS-SCCCCEE-EECCSS----CEE-EEEECCCC---------CGGGCCEEEEET
T ss_pred ECCCCCCCEEEEEeCCC-cEEEEEeecC-CCcceeE-eecCCC----ceE-EEEecCcccccccccccCCCCCEEEEEEC
Confidence 4556 88999988764 45566 3322 0010000 000000 000 111122 5788888874
Q ss_pred --ceeEeeCCCC--eEEEEcccCCCCCCccCCCccEEecccccCCCCCCCcc---cEEEEecCCCCCcccccCCCccccc
Q 039705 221 --RSILLNPETN--EILHVFPILRGGSRNYPASATSALLPIKLQDPNSNAIR---AEVLICGGAKPEAGVLAGKGEFMNA 293 (539)
Q Consensus 221 --~~e~yDp~tn--~W~~~~p~mp~~~r~yp~~g~av~lpl~~~~~~~~~~~---g~Iyv~GG~~~~~~~~~~~~~~~~a 293 (539)
.+.+||..++ .+. ....+.. .. +....+...| + ++++++||.+.
T Consensus 179 dg~I~iwd~~~~~~~~~-~~~~~~~-h~-----~~V~~l~~sp--------~~~~~~~l~s~s~Dg-------------- 229 (753)
T 3jro_A 179 DNLVKIWKYNSDAQTYV-LESTLEG-HS-----DWVRDVAWSP--------TVLLRSYLASVSQDR-------------- 229 (753)
T ss_dssp TSCEEEEEEETTTTEEE-EEEEECC-CS-----SCEEEEEECC--------CCSSSEEEEEEESSS--------------
T ss_pred CCeEEEEeccCCcccce-eeeeecC-CC-----CcEEEEEecc--------CCCCCCEEEEEecCC--------------
Confidence 4678887654 222 2222222 11 1111111111 4 78999988651
Q ss_pred CCceEEEEeeCCCCceeee--cc-CCCceeceeEEecCCcEEEEcCcCCCCCCcccCCCCCCccEEEcCCCCCCCceEec
Q 039705 294 LQDCGRIEITNKSATWQRE--MM-PSPRVMGEMLLLPTGDVLIINGAKKGTAGWNFATDPNTTPVLYEPDDPINERFSEL 370 (539)
Q Consensus 294 ~~s~~~~d~~~~~~~W~~~--~M-~~~R~~~~~vvlpdG~I~vvGG~~~g~~g~~~~~~~~~~~e~YdP~t~~g~~Wt~~ 370 (539)
.+..+|+......+... .. .....-.+...-|||+.+++||.+ | .+.+||..++ .+|...
T Consensus 230 --~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~D-g------------~I~vwd~~~~--~~~~~~ 292 (753)
T 3jro_A 230 --TCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGD-N------------KVTLWKENLE--GKWEPA 292 (753)
T ss_dssp --CEEEEEESSSSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEECSS-S------------CEECCBCCSS--SCCBCC
T ss_pred --EEEEecCCCCCCcceeEEeccCCCCCceEEEEEcCCCCEEEEEcCC-C------------EEEEEecCCC--CCcccc
Confidence 35678876433333322 21 111111233456899999999875 2 5788998754 277766
Q ss_pred CCCC
Q 039705 371 TPTS 374 (539)
Q Consensus 371 a~~~ 374 (539)
....
T Consensus 293 ~~~~ 296 (753)
T 3jro_A 293 GEVH 296 (753)
T ss_dssp CCBC
T ss_pred cccc
Confidence 5443
No 111
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=96.45 E-value=0.12 Score=53.08 Aligned_cols=109 Identities=7% Similarity=0.048 Sum_probs=62.2
Q ss_pred eecCCCcEEEecCCCCCCCeEEEEeCCCCccceeecccccccc-cccceeEEccCCcEEEEcCccCCeEEEE-ecCCCcc
Q 039705 107 GLSANGTIVISGGWSSRGRSVRYLSGCYHACYWKEHHWELSAK-RWFSTQHILPDGSFIVVGGRREFSYEYI-LKEGKRI 184 (539)
Q Consensus 107 ~~l~dG~l~v~GG~~~g~~~v~~ydP~~~t~~W~~~~~~m~~~-R~y~s~~~L~dG~VyvvGG~~~~~~E~y-P~~~~~~ 184 (539)
.+.+++.++++|+.+ ..+++||.. +.+.... +... ..-.+.+.-++|++++.|+.++ ++.+| ..+. +
T Consensus 115 ~~~p~~~~l~s~s~D---g~i~vwd~~--~~~~~~~---l~~h~~~V~~v~~~~~~~~l~sgs~D~-~i~iwd~~~~--~ 183 (410)
T 1vyh_C 115 IFHPVFSVMVSASED---ATIKVWDYE--TGDFERT---LKGHTDSVQDISFDHSGKLLASCSADM-TIKLWDFQGF--E 183 (410)
T ss_dssp EECSSSSEEEEEESS---SCEEEEETT--TCCCCEE---ECCCSSCEEEEEECTTSSEEEEEETTS-CCCEEETTSS--C
T ss_pred EEcCCCCEEEEEeCC---CeEEEEECC--CCcEEEE---EeccCCcEEEEEEcCCCCEEEEEeCCC-eEEEEeCCCC--c
Confidence 445789999999863 578999987 5433221 2211 1222344456899999888764 45566 3322 1
Q ss_pred eeeccCccccCCCCCCCCcceEEEeeCCcEEEEEcCc--eeEeeCCCCeEE
Q 039705 185 IYDLPILNETTNPSENNLYPFVFLSTDGNLFIFANDR--SILLNPETNEIL 233 (539)
Q Consensus 185 w~~~~~l~~~~~~~~~~~yp~~~~~~~G~Iyv~Gg~~--~e~yDp~tn~W~ 233 (539)
- ...+..... . --.+...++|+.++.|+.+ +.+||..++.-.
T Consensus 184 ~--~~~~~~h~~----~-V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~ 227 (410)
T 1vyh_C 184 C--IRTMHGHDH----N-VSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCV 227 (410)
T ss_dssp E--EECCCCCSS----C-EEEEEECSSSSEEEEEETTSEEEEEETTTCCEE
T ss_pred e--eEEEcCCCC----C-EEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEE
Confidence 1 111111110 0 0122334689988888754 778999887654
No 112
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=96.45 E-value=0.1 Score=52.54 Aligned_cols=120 Identities=10% Similarity=0.025 Sum_probs=57.7
Q ss_pred ceecCCCcEEEecCCCCC---CCeEEEEeCCCCccceeecccccccccccceeEEccCCcEEEEcCccCCeEEEE-ecCC
Q 039705 106 GGLSANGTIVISGGWSSR---GRSVRYLSGCYHACYWKEHHWELSAKRWFSTQHILPDGSFIVVGGRREFSYEYI-LKEG 181 (539)
Q Consensus 106 ~~~l~dG~l~v~GG~~~g---~~~v~~ydP~~~t~~W~~~~~~m~~~R~y~s~~~L~dG~VyvvGG~~~~~~E~y-P~~~ 181 (539)
.++.+||++++.|+.... ..++++|+..............+...-.-.+.+..+|+++++. +.+ .++.+| ..++
T Consensus 48 v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~d~~~l~~-s~d-g~v~lWd~~~~ 125 (357)
T 4g56_B 48 VRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGVQTEAGVTDVAWVSEKGILVA-SDS-GAVELWEILEK 125 (357)
T ss_dssp EEECSSSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCSEEEECSSCEEEEEEETTTEEEEE-ETT-SCEEEC-----
T ss_pred EEECCCCCEEEEEcCCCCccccCeEEEEECCCCCcceeEecccCCCCCCEEEEEEcCCCCEEEE-ECC-CEEEEeecccc
Confidence 456789999999985321 2367778754101111111110111111223445668876654 433 456676 4433
Q ss_pred Cccee-eccCc-cccCCCCCCCCcceEEEeeCCcEEEEEcC--ceeEeeCCCCeEEE
Q 039705 182 KRIIY-DLPIL-NETTNPSENNLYPFVFLSTDGNLFIFAND--RSILLNPETNEILH 234 (539)
Q Consensus 182 ~~~w~-~~~~l-~~~~~~~~~~~yp~~~~~~~G~Iyv~Gg~--~~e~yDp~tn~W~~ 234 (539)
+.. ..... ....+ . --.+...++|+.++.|+. .+.+||..+++...
T Consensus 126 --~~~~~~~~~~~~h~~----~-V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~ 175 (357)
T 4g56_B 126 --ESLLVNKFAKYEHDD----I-VKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLK 175 (357)
T ss_dssp -----CCCCEEECCCSS----C-EEEEEECSSSSEEEEEETTSCEEEEETTTTEEEE
T ss_pred --ceeEEEeeccCCCCC----C-EEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEE
Confidence 111 01100 01000 0 011234579999998875 47889999887553
No 113
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=96.44 E-value=0.26 Score=47.33 Aligned_cols=132 Identities=12% Similarity=0.042 Sum_probs=67.5
Q ss_pred EEEEECCCCCEEeCccC--CCcccccceecCCCcEEEecCCCCCCCeEEEEeCCCCccceeecccccccccccceeEEcc
Q 039705 82 AVEYDAESAAIRPLKIL--TDTWSSSGGLSANGTIVISGGWSSRGRSVRYLSGCYHACYWKEHHWELSAKRWFSTQHILP 159 (539)
Q Consensus 82 ~~~yDp~t~~w~~l~~~--~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydP~~~t~~W~~~~~~m~~~R~y~s~~~L~ 159 (539)
+.+||..+++...+-.. +......-...++|+.+++|+.+ ..+++||.. +.+-... +........ +.-.
T Consensus 47 V~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~D---g~v~iw~~~--~~~~~~~---~~~h~~~~~-~~~~ 117 (318)
T 4ggc_A 47 VYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSS---AEVQLWDVQ--QQKRLRN---MTSHSARVG-SLSW 117 (318)
T ss_dssp EEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETT---SEEEEEETT--TTEEEEE---EECCSSCEE-EEEE
T ss_pred EEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECC---CcEEEeecC--CceeEEE---ecCccceEE-Eeec
Confidence 56677777766543322 22222234556799999999863 689999987 5432221 221111112 2233
Q ss_pred CCcEEEEcCccCCeEEEE-ecCCCcceeeccCccccCCCCCCCCcceEEEeeCCcEEEEEcC--ceeEeeCCCCe
Q 039705 160 DGSFIVVGGRREFSYEYI-LKEGKRIIYDLPILNETTNPSENNLYPFVFLSTDGNLFIFAND--RSILLNPETNE 231 (539)
Q Consensus 160 dG~VyvvGG~~~~~~E~y-P~~~~~~w~~~~~l~~~~~~~~~~~yp~~~~~~~G~Iyv~Gg~--~~e~yDp~tn~ 231 (539)
++++++.|+.+. ....+ .... ... ...+..... ........++|+.++.|+. .+.+||.++++
T Consensus 118 ~~~~l~s~~~~~-~~~~~~~~~~--~~~-~~~~~~~~~-----~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~ 183 (318)
T 4ggc_A 118 NSYILSSGSRSG-HIHHHDVRVA--EHH-VATLSGHSQ-----EVCGLRWAPDGRHLASGGNDNLVNVWPSAPGE 183 (318)
T ss_dssp ETTEEEEEETTS-EEEEEETTSS--SCE-EEEEECCSS-----CEEEEEECTTSSEEEEEETTSCEEEEESSCBT
T ss_pred CCCEEEEEecCC-ceEeeecCCC--cee-EEEEcCccC-----ceEEEEEcCCCCEEEEEecCcceeEEECCCCc
Confidence 678888777654 22233 2211 111 110111100 0112233467888888875 46788987654
No 114
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=96.42 E-value=0.072 Score=53.28 Aligned_cols=110 Identities=11% Similarity=0.045 Sum_probs=55.7
Q ss_pred ceecC-CCcEEEecCCCCCCCeEEEEeCCCCccceeeccc--c--------cc-cccccceeEEcc-CCcEEEEcCccCC
Q 039705 106 GGLSA-NGTIVISGGWSSRGRSVRYLSGCYHACYWKEHHW--E--------LS-AKRWFSTQHILP-DGSFIVVGGRREF 172 (539)
Q Consensus 106 ~~~l~-dG~l~v~GG~~~g~~~v~~ydP~~~t~~W~~~~~--~--------m~-~~R~y~s~~~L~-dG~VyvvGG~~~~ 172 (539)
-...+ +|+++++|+.. ..+++||.. +........ . +. ....-.+.+..+ ++++++.|+.+ .
T Consensus 49 ~~~s~~~~~~l~~~~~d---g~i~iw~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d-~ 122 (408)
T 4a11_B 49 LDIEPVEGRYMLSGGSD---GVIVLYDLE--NSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSSSFD-K 122 (408)
T ss_dssp EEECTTTCCEEEEEETT---SCEEEEECC--CCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEEEETT-S
T ss_pred EEEecCCCCEEEEEcCC---CeEEEEECC--CCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEEEEeCC-C
Confidence 34556 89999999863 568899986 332211100 0 00 111112333444 66788877765 3
Q ss_pred eEEEE-ecCCCccee-eccCccccCCCCCCCCcceEEEee---CCcEEEEEcC--ceeEeeCCCCeE
Q 039705 173 SYEYI-LKEGKRIIY-DLPILNETTNPSENNLYPFVFLST---DGNLFIFAND--RSILLNPETNEI 232 (539)
Q Consensus 173 ~~E~y-P~~~~~~w~-~~~~l~~~~~~~~~~~yp~~~~~~---~G~Iyv~Gg~--~~e~yDp~tn~W 232 (539)
.+.+| ..+. +.. ..... . ... .....+ ++++++.|+. .+.+||..+.+.
T Consensus 123 ~i~iwd~~~~--~~~~~~~~~-~-------~~~-~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~ 178 (408)
T 4a11_B 123 TLKVWDTNTL--QTADVFNFE-E-------TVY-SHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSC 178 (408)
T ss_dssp EEEEEETTTT--EEEEEEECS-S-------CEE-EEEECSSCSSCCEEEEEESSSSEEEEESSSSCC
T ss_pred eEEEeeCCCC--ccceeccCC-C-------cee-eeEeecCCCCCcEEEEEcCCCeEEEEeCCCcce
Confidence 56666 4332 221 11110 0 000 112222 5557777764 477899887653
No 115
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=96.38 E-value=0.88 Score=46.57 Aligned_cols=236 Identities=12% Similarity=0.102 Sum_probs=119.3
Q ss_pred EEEEECCCCCEEeCccCCCcccccceecCCCcEEEecCCCCCCCeEEEEeCCCCccceeecccccccccccceeEEccCC
Q 039705 82 AVEYDAESAAIRPLKILTDTWSSSGGLSANGTIVISGGWSSRGRSVRYLSGCYHACYWKEHHWELSAKRWFSTQHILPDG 161 (539)
Q Consensus 82 ~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydP~~~t~~W~~~~~~m~~~R~y~s~~~L~dG 161 (539)
..+||..+.+....-..+.... .....++.++++|+.+ ..+++||.. +.+-.. . +......-.+... ++
T Consensus 141 i~vwd~~~~~~~~~~~~h~~~v--~~~~~~~~~l~s~~~d---g~i~vwd~~--~~~~~~--~-~~~h~~~v~~~~~-~~ 209 (445)
T 2ovr_B 141 LKVWSAVTGKCLRTLVGHTGGV--WSSQMRDNIIISGSTD---RTLKVWNAE--TGECIH--T-LYGHTSTVRCMHL-HE 209 (445)
T ss_dssp EEEEETTTCCEEEECCCCSSCE--EEEEEETTEEEEEETT---SCEEEEETT--TTEEEE--E-ECCCSSCEEEEEE-ET
T ss_pred EEEEECCCCcEEEEEcCCCCCE--EEEEecCCEEEEEeCC---CeEEEEECC--cCcEEE--E-ECCCCCcEEEEEe-cC
Confidence 6688988776543222222111 1122357788888763 578999987 443221 1 2222212233334 67
Q ss_pred cEEEEcCccCCeEEEE-ecCCCccee-eccCccccCCCCCCCCcceEEEeeCCcEEEEEcC--ceeEeeCCCCeEEEEcc
Q 039705 162 SFIVVGGRREFSYEYI-LKEGKRIIY-DLPILNETTNPSENNLYPFVFLSTDGNLFIFAND--RSILLNPETNEILHVFP 237 (539)
Q Consensus 162 ~VyvvGG~~~~~~E~y-P~~~~~~w~-~~~~l~~~~~~~~~~~yp~~~~~~~G~Iyv~Gg~--~~e~yDp~tn~W~~~~p 237 (539)
+.+++|+.+ .++.+| ..+. +-. ... ... .+...+..+|+.++.|+. .+.+||..+.+-...+
T Consensus 210 ~~l~s~s~d-g~i~~wd~~~~--~~~~~~~---~~~-------~~v~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~- 275 (445)
T 2ovr_B 210 KRVVSGSRD-ATLRVWDIETG--QCLHVLM---GHV-------AAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTL- 275 (445)
T ss_dssp TEEEEEETT-SEEEEEESSSC--CEEEEEE---CCS-------SCEEEEEECSSCEEEEETTSCEEEEEGGGTEEEEEE-
T ss_pred CEEEEEeCC-CEEEEEECCCC--cEEEEEc---CCc-------ccEEEEEECCCEEEEEcCCCEEEEEECCCCcEeEEe-
Confidence 777877765 456677 4433 221 111 110 112344458888888875 4788999887654333
Q ss_pred cCCCCCCccCCCccEEecccccCCCCCCCcccEEEEecCCCCCcccccCCCcccccCCceEEEEeeCCCCceeeeccCCC
Q 039705 238 ILRGGSRNYPASATSALLPIKLQDPNSNAIRAEVLICGGAKPEAGVLAGKGEFMNALQDCGRIEITNKSATWQREMMPSP 317 (539)
Q Consensus 238 ~mp~~~r~yp~~g~av~lpl~~~~~~~~~~~g~Iyv~GG~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~~M~~~ 317 (539)
.. ... ....+. .+++.+++|+.+. .+..+|+......++. .....
T Consensus 276 --~~-~~~----~v~~~~-----------~~~~~l~~~~~d~----------------~i~i~d~~~~~~~~~~-~~~~~ 320 (445)
T 2ovr_B 276 --QG-HTN----RVYSLQ-----------FDGIHVVSGSLDT----------------SIRVWDVETGNCIHTL-TGHQS 320 (445)
T ss_dssp --CC-CSS----CEEEEE-----------ECSSEEEEEETTS----------------CEEEEETTTCCEEEEE-CCCCS
T ss_pred --cC-CCC----ceEEEE-----------ECCCEEEEEeCCC----------------eEEEEECCCCCEEEEE-cCCcc
Confidence 22 111 111111 2566777777651 3556776421111111 11111
Q ss_pred ceeceeEEecCCcEEEEcCcCCCCCCcccCCCCCCccEEEcCCCCCCCce-EecCCCCCCccceeeEeeCCCCeEEEecC
Q 039705 318 RVMGEMLLLPTGDVLIINGAKKGTAGWNFATDPNTTPVLYEPDDPINERF-SELTPTSKPRMCHSTSVVLPDGKILVAGS 396 (539)
Q Consensus 318 R~~~~~vvlpdG~I~vvGG~~~g~~g~~~~~~~~~~~e~YdP~t~~g~~W-t~~a~~~~~R~yhs~a~llpdG~V~v~GG 396 (539)
. ...+ .++++.+++|+.+ | .+.+||..+. +- ..+.... ... ..+..+..+++.+++|+
T Consensus 321 ~--v~~~-~~~~~~l~~~~~d-g------------~i~vwd~~~~---~~~~~~~~~~-~~~-~~v~~~~~~~~~l~s~~ 379 (445)
T 2ovr_B 321 L--TSGM-ELKDNILVSGNAD-S------------TVKIWDIKTG---QCLQTLQGPN-KHQ-SAVTCLQFNKNFVITSS 379 (445)
T ss_dssp C--EEEE-EEETTEEEEEETT-S------------CEEEEETTTC---CEEEEECSTT-SCS-SCEEEEEECSSEEEEEE
T ss_pred c--EEEE-EEeCCEEEEEeCC-C------------eEEEEECCCC---cEEEEEccCC-CCC-CCEEEEEECCCEEEEEe
Confidence 1 2223 3488888888865 2 5789998776 32 2222110 011 11222334889999988
Q ss_pred CC
Q 039705 397 NP 398 (539)
Q Consensus 397 ~~ 398 (539)
.+
T Consensus 380 ~d 381 (445)
T 2ovr_B 380 DD 381 (445)
T ss_dssp TT
T ss_pred CC
Confidence 63
No 116
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=96.27 E-value=0.29 Score=49.21 Aligned_cols=236 Identities=11% Similarity=0.052 Sum_probs=112.4
Q ss_pred ecCCCc-EEEecCCCC-------CCCeEEEEeCCCCcccee-ecccccccccccceeEEccCCcEEEEcCccCCeEEEE-
Q 039705 108 LSANGT-IVISGGWSS-------RGRSVRYLSGCYHACYWK-EHHWELSAKRWFSTQHILPDGSFIVVGGRREFSYEYI- 177 (539)
Q Consensus 108 ~l~dG~-l~v~GG~~~-------g~~~v~~ydP~~~t~~W~-~~~~~m~~~R~y~s~~~L~dG~VyvvGG~~~~~~E~y- 177 (539)
..+||+ ++++|.... ....+++||.. +..-. .... +.....-.+.+.-+||+.+++|+.+ ..+.+|
T Consensus 20 ~sp~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~--~~~~~~~~~~-~~~~~~v~~~~~s~~~~~l~~~~~d-g~v~vw~ 95 (416)
T 2pm9_A 20 WSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLL--AADSEKPIAS-LQVDSKFNDLDWSHNNKIIAGALDN-GSLELYS 95 (416)
T ss_dssp BCSSSSCEEEEBCBSSCCCSSCCCCCCCEEEESS--SGGGCSCSCC-CCCSSCEEEEEECSSSSCEEEEESS-SCEEEEC
T ss_pred eCCCCCCEEEEEecCcccccccCCCCeEEEEEcc--CCCCCcEEEE-EecCCceEEEEECCCCCeEEEEccC-CeEEEee
Confidence 356776 888883211 13578899987 43321 1111 2222222344455689888888765 356677
Q ss_pred ecCCCcceeeccCccccCCCCCCCCcceEEEeeC-CcEEEEEcC--ceeEeeCCCCe------EEEEcccCCCCCCccCC
Q 039705 178 LKEGKRIIYDLPILNETTNPSENNLYPFVFLSTD-GNLFIFAND--RSILLNPETNE------ILHVFPILRGGSRNYPA 248 (539)
Q Consensus 178 P~~~~~~w~~~~~l~~~~~~~~~~~yp~~~~~~~-G~Iyv~Gg~--~~e~yDp~tn~------W~~~~p~mp~~~r~yp~ 248 (539)
..+..........+..... ... .+...++ +++++.|+. .+.+||..+.+ ....+..... ... +
T Consensus 96 ~~~~~~~~~~~~~~~~h~~----~v~-~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~-~~~-~- 167 (416)
T 2pm9_A 96 TNEANNAINSMARFSNHSS----SVK-TVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMS-SVD-E- 167 (416)
T ss_dssp CSSTTSCCCEEEECCCSSS----CCC-EEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCC-SSC-C-
T ss_pred cccccccccchhhccCCcc----ceE-EEEEcCCCCCEEEEEcCCCeEEEEECCCCccccccccccccccccC-CCC-C-
Confidence 4431001111111111111 111 2233456 888888875 47789988765 1101111111 000 0
Q ss_pred CccEEecccccCCCCCCCcccEEEEecCCCCCcccccCCCcccccCCceEEEEeeCCCCceeee-ccCC-----Cceece
Q 039705 249 SATSALLPIKLQDPNSNAIRAEVLICGGAKPEAGVLAGKGEFMNALQDCGRIEITNKSATWQRE-MMPS-----PRVMGE 322 (539)
Q Consensus 249 ~g~av~lpl~~~~~~~~~~~g~Iyv~GG~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~-~M~~-----~R~~~~ 322 (539)
.-+....| .+++++++|+.+. .+..+|+.. .+-... .... ...-.+
T Consensus 168 v~~~~~~~----------~~~~~l~~~~~dg----------------~v~iwd~~~--~~~~~~~~~~~~~~~~~~~v~~ 219 (416)
T 2pm9_A 168 VISLAWNQ----------SLAHVFASAGSSN----------------FASIWDLKA--KKEVIHLSYTSPNSGIKQQLSV 219 (416)
T ss_dssp CCEEEECS----------SCTTEEEEESSSS----------------CEEEEETTT--TEEEEEECCCCCSSCCCCCEEE
T ss_pred eeEEEeCC----------CCCcEEEEEcCCC----------------CEEEEECCC--CCcceEEeccccccccCCceEE
Confidence 01122211 1267888887651 355677642 222221 2221 122233
Q ss_pred eEEecCC-cEEEEcCcCCCCCCcccCCCCCCccEEEcCCCCCCCceEecCCCC--CCccceeeEeeCC-CCeEEEecCCC
Q 039705 323 MLLLPTG-DVLIINGAKKGTAGWNFATDPNTTPVLYEPDDPINERFSELTPTS--KPRMCHSTSVVLP-DGKILVAGSNP 398 (539)
Q Consensus 323 ~vvlpdG-~I~vvGG~~~g~~g~~~~~~~~~~~e~YdP~t~~g~~Wt~~a~~~--~~R~yhs~a~llp-dG~V~v~GG~~ 398 (539)
....|+| +++++++.+ +.. ..+.+||..+. +- .+..+. ....- ....+.| |++++++|+.+
T Consensus 220 ~~~~~~~~~~l~~~~~d-~~~---------~~i~~~d~~~~---~~-~~~~~~~~~~~~v-~~~~~s~~~~~~l~s~~~d 284 (416)
T 2pm9_A 220 VEWHPKNSTRVATATGS-DND---------PSILIWDLRNA---NT-PLQTLNQGHQKGI-LSLDWCHQDEHLLLSSGRD 284 (416)
T ss_dssp EEECSSCTTEEEEEECC-SSS---------CCCCEEETTST---TS-CSBCCCSCCSSCE-EEEEECSSCSSCEEEEESS
T ss_pred EEECCCCCCEEEEEECC-CCC---------ceEEEEeCCCC---CC-CcEEeecCccCce-eEEEeCCCCCCeEEEEeCC
Confidence 4556787 688877755 211 15788998875 21 111111 11111 2234467 99999999864
No 117
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=96.26 E-value=0.71 Score=44.81 Aligned_cols=63 Identities=8% Similarity=-0.082 Sum_probs=36.3
Q ss_pred eecCCCc-EEEecCCCCCCCeEEEEeC-CCCccceeecccccccccccceeEEccCCcEEEEcCccCCeEEEE
Q 039705 107 GLSANGT-IVISGGWSSRGRSVRYLSG-CYHACYWKEHHWELSAKRWFSTQHILPDGSFIVVGGRREFSYEYI 177 (539)
Q Consensus 107 ~~l~dG~-l~v~GG~~~g~~~v~~ydP-~~~t~~W~~~~~~m~~~R~y~s~~~L~dG~VyvvGG~~~~~~E~y 177 (539)
...++|+ .+++|+.. ..+.+||. . +.+...+.. ......-.+.+..+ ++.++.|+.+ ..+.+|
T Consensus 63 ~~~~~~~~~l~~~~~d---g~i~~wd~~~--~~~~~~~~~-~~~~~~v~~l~~~~-~~~l~s~~~d-~~i~iw 127 (342)
T 1yfq_A 63 NFIDNTDLQIYVGTVQ---GEILKVDLIG--SPSFQALTN-NEANLGICRICKYG-DDKLIAASWD-GLIEVI 127 (342)
T ss_dssp EEEESSSEEEEEEETT---SCEEEECSSS--SSSEEECBS-CCCCSCEEEEEEET-TTEEEEEETT-SEEEEE
T ss_pred EECCCCCcEEEEEcCC---CeEEEEEecc--CCceEeccc-cCCCCceEEEEeCC-CCEEEEEcCC-CeEEEE
Confidence 4456899 88888753 57899998 7 544433221 00111112333444 7788888765 345666
No 118
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=96.26 E-value=0.17 Score=50.82 Aligned_cols=115 Identities=19% Similarity=0.139 Sum_probs=61.1
Q ss_pred eecCC-CcEEEecCCCCCCCeEEEEeCCCCccceeeccccccc-----ccccceeEEccCC-cEEEEcCccC--CeEEEE
Q 039705 107 GLSAN-GTIVISGGWSSRGRSVRYLSGCYHACYWKEHHWELSA-----KRWFSTQHILPDG-SFIVVGGRRE--FSYEYI 177 (539)
Q Consensus 107 ~~l~d-G~l~v~GG~~~g~~~v~~ydP~~~t~~W~~~~~~m~~-----~R~y~s~~~L~dG-~VyvvGG~~~--~~~E~y 177 (539)
...++ +.++++|+.. ..+.+||.. +.+-...-. ... ...-.+.+..++| .++++|+.++ ..+.+|
T Consensus 172 ~~~~~~~~~l~~~~~d---g~v~iwd~~--~~~~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~ 245 (416)
T 2pm9_A 172 AWNQSLAHVFASAGSS---NFASIWDLK--AKKEVIHLS-YTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIW 245 (416)
T ss_dssp EECSSCTTEEEEESSS---SCEEEEETT--TTEEEEEEC-CCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEE
T ss_pred EeCCCCCcEEEEEcCC---CCEEEEECC--CCCcceEEe-ccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEE
Confidence 44566 7899998763 568999987 543322111 110 1222344555666 5777777654 256677
Q ss_pred -ecCCCcceeeccCcc-ccCCCCCCCCcce-EEEee-CCcEEEEEcC--ceeEeeCCCCeEEEEc
Q 039705 178 -LKEGKRIIYDLPILN-ETTNPSENNLYPF-VFLST-DGNLFIFAND--RSILLNPETNEILHVF 236 (539)
Q Consensus 178 -P~~~~~~w~~~~~l~-~~~~~~~~~~yp~-~~~~~-~G~Iyv~Gg~--~~e~yDp~tn~W~~~~ 236 (539)
..+. .. ....+. .. ..... +...+ ++++++.|+. .+.+||..+.+-...+
T Consensus 246 d~~~~--~~-~~~~~~~~~------~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~ 301 (416)
T 2pm9_A 246 DLRNA--NT-PLQTLNQGH------QKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQF 301 (416)
T ss_dssp ETTST--TS-CSBCCCSCC------SSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEE
T ss_pred eCCCC--CC-CcEEeecCc------cCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceee
Confidence 4332 11 111111 11 00111 22235 8888888875 4788999887654333
No 119
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=96.24 E-value=0.75 Score=43.86 Aligned_cols=181 Identities=8% Similarity=0.134 Sum_probs=89.2
Q ss_pred EccCCcEEEEcCccCCeEEEE-ecCCCcceeeccCccccCCCCCCCCcceEEEe--eCCcEEEEE---cCceeEeeCCCC
Q 039705 157 ILPDGSFIVVGGRREFSYEYI-LKEGKRIIYDLPILNETTNPSENNLYPFVFLS--TDGNLFIFA---NDRSILLNPETN 230 (539)
Q Consensus 157 ~L~dG~VyvvGG~~~~~~E~y-P~~~~~~w~~~~~l~~~~~~~~~~~yp~~~~~--~~G~Iyv~G---g~~~e~yDp~tn 230 (539)
.-++|++||....+ ..+.+| +... ........... .....+|..+++ .+|+||+.. +..+.+||+...
T Consensus 37 ~~~~g~l~v~~~~~-~~i~~~d~~g~--~~~~~~~~~~~---~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~d~~g~ 110 (286)
T 1q7f_A 37 VNAQNDIIVADTNN-HRIQIFDKEGR--FKFQFGECGKR---DSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYNQYGQ 110 (286)
T ss_dssp ECTTCCEEEEEGGG-TEEEEECTTSC--EEEEECCBSSS---TTCBSSEEEEEEETTTTEEEEEECGGGCEEEEECTTSC
T ss_pred ECCCCCEEEEECCC-CEEEEECCCCc--EEEEecccCCC---cccccCceEEEEEcCCCeEEEEcCCCCCEEEEECCCCc
Confidence 33578888875433 345566 4421 11111110000 001124555555 479999987 356788996544
Q ss_pred eEEEEcccCCCCCCccCCCccEEecccccCCCCCCCcccEEEEecCCCCCcccccCCCcccccCCceEEEEeeCCCCcee
Q 039705 231 EILHVFPILRGGSRNYPASATSALLPIKLQDPNSNAIRAEVLICGGAKPEAGVLAGKGEFMNALQDCGRIEITNKSATWQ 310 (539)
Q Consensus 231 ~W~~~~p~mp~~~r~yp~~g~av~lpl~~~~~~~~~~~g~Iyv~GG~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~ 310 (539)
... .+..- ....| .+. ++- .+++||++...+ ..+.+||+.. ...+.
T Consensus 111 ~~~-~~~~~---~~~~~-~~i-~~~-----------~~g~l~v~~~~~----------------~~i~~~~~~g-~~~~~ 156 (286)
T 1q7f_A 111 FVR-KFGAT---ILQHP-RGV-TVD-----------NKGRIIVVECKV----------------MRVIIFDQNG-NVLHK 156 (286)
T ss_dssp EEE-EECTT---TCSCE-EEE-EEC-----------TTSCEEEEETTT----------------TEEEEECTTS-CEEEE
T ss_pred EEE-EecCc---cCCCc-eEE-EEe-----------CCCCEEEEECCC----------------CEEEEEcCCC-CEEEE
Confidence 332 33211 11121 122 221 267899886432 2355666421 11111
Q ss_pred ee---ccCCCceeceeEEecCCcEEEEcCcCCCCCCcccCCCCCCccEEEcCCCCCCCceEecCCCCCCccceeeEeeCC
Q 039705 311 RE---MMPSPRVMGEMLLLPTGDVLIINGAKKGTAGWNFATDPNTTPVLYEPDDPINERFSELTPTSKPRMCHSTSVVLP 387 (539)
Q Consensus 311 ~~---~M~~~R~~~~~vvlpdG~I~vvGG~~~g~~g~~~~~~~~~~~e~YdP~t~~g~~Wt~~a~~~~~R~yhs~a~llp 387 (539)
.. .+..++ +.++-+||+|||.+..+ ..+.+||++.. ....+..-.... .....++-+
T Consensus 157 ~~~~~~~~~p~---~i~~~~~g~l~v~~~~~-------------~~i~~~~~~g~---~~~~~~~~g~~~-~p~~i~~d~ 216 (286)
T 1q7f_A 157 FGCSKHLEFPN---GVVVNDKQEIFISDNRA-------------HCVKVFNYEGQ---YLRQIGGEGITN-YPIGVGINS 216 (286)
T ss_dssp EECTTTCSSEE---EEEECSSSEEEEEEGGG-------------TEEEEEETTCC---EEEEESCTTTSC-SEEEEEECT
T ss_pred eCCCCccCCcE---EEEECCCCCEEEEECCC-------------CEEEEEcCCCC---EEEEEccCCccC-CCcEEEECC
Confidence 11 122232 33456789999976533 15789998655 444443211001 112234568
Q ss_pred CCeEEEecCC
Q 039705 388 DGKILVAGSN 397 (539)
Q Consensus 388 dG~V~v~GG~ 397 (539)
||++||+...
T Consensus 217 ~G~l~v~~~~ 226 (286)
T 1q7f_A 217 NGEILIADNH 226 (286)
T ss_dssp TCCEEEEECS
T ss_pred CCCEEEEeCC
Confidence 9999998764
No 120
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=96.24 E-value=0.11 Score=50.99 Aligned_cols=227 Identities=11% Similarity=0.094 Sum_probs=114.5
Q ss_pred eecCCCcEEEecCCCCCCCeEEEEeCCCCccceeeccccccccc-ccceeEEccCCcEEEEcCccCCeEEEE-ecCCCcc
Q 039705 107 GLSANGTIVISGGWSSRGRSVRYLSGCYHACYWKEHHWELSAKR-WFSTQHILPDGSFIVVGGRREFSYEYI-LKEGKRI 184 (539)
Q Consensus 107 ~~l~dG~l~v~GG~~~g~~~v~~ydP~~~t~~W~~~~~~m~~~R-~y~s~~~L~dG~VyvvGG~~~~~~E~y-P~~~~~~ 184 (539)
+..+||+++++|+.. ..+.+||.. +.+-.. . +.... .-.+.+..+||+.+++|+.++ .+.+| ..+. +
T Consensus 39 ~~s~~~~~l~~~~~d---g~i~vwd~~--~~~~~~--~-~~~h~~~v~~~~~~~~~~~l~s~~~dg-~i~iwd~~~~--~ 107 (369)
T 3zwl_B 39 KYNKEGDLLFSCSKD---SSASVWYSL--NGERLG--T-LDGHTGTIWSIDVDCFTKYCVTGSADY-SIKLWDVSNG--Q 107 (369)
T ss_dssp EECTTSCEEEEEESS---SCEEEEETT--TCCEEE--E-ECCCSSCEEEEEECTTSSEEEEEETTT-EEEEEETTTC--C
T ss_pred EEcCCCCEEEEEeCC---CEEEEEeCC--Cchhhh--h-hhhcCCcEEEEEEcCCCCEEEEEeCCC-eEEEEECCCC--c
Confidence 345689999998753 578999976 433221 1 22111 122344556899888887753 56666 4433 2
Q ss_pred ee-eccCccccCCCCCCCCcceEEEeeCCcEEEEEcC-------ceeEeeCCCCe----EEEEcccCCCCCCccCCCc--
Q 039705 185 IY-DLPILNETTNPSENNLYPFVFLSTDGNLFIFAND-------RSILLNPETNE----ILHVFPILRGGSRNYPASA-- 250 (539)
Q Consensus 185 w~-~~~~l~~~~~~~~~~~yp~~~~~~~G~Iyv~Gg~-------~~e~yDp~tn~----W~~~~p~mp~~~r~yp~~g-- 250 (539)
.. .... .. . --.+...++|+.++.++. .+.+||..+.. +. ....-+. .......+
T Consensus 108 ~~~~~~~-~~-------~-v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~ 176 (369)
T 3zwl_B 108 CVATWKS-PV-------P-VKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELT-KVSEEPI-HKIITHEGLD 176 (369)
T ss_dssp EEEEEEC-SS-------C-EEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEE-EECSSCS-EEEECCTTCC
T ss_pred EEEEeec-CC-------C-eEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeec-cccccee-eeccCCcCcc
Confidence 21 1110 00 0 012234568888877753 35667765432 11 0100000 00000000
Q ss_pred cEEecccccCCCCCCCcccEEEEecCCCCCcccccCCCcccccCCceEEEEeeCCCCceeee-ccCCCceeceeEEecCC
Q 039705 251 TSALLPIKLQDPNSNAIRAEVLICGGAKPEAGVLAGKGEFMNALQDCGRIEITNKSATWQRE-MMPSPRVMGEMLLLPTG 329 (539)
Q Consensus 251 ~av~lpl~~~~~~~~~~~g~Iyv~GG~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~-~M~~~R~~~~~vvlpdG 329 (539)
....+... .+++.+++|+.+ ..+..||+... ..-... ....... .+....|||
T Consensus 177 ~~~~~~~~--------~~~~~l~~~~~d----------------g~i~i~d~~~~-~~~~~~~~~~~~~v-~~~~~~~~~ 230 (369)
T 3zwl_B 177 AATVAGWS--------TKGKYIIAGHKD----------------GKISKYDVSNN-YEYVDSIDLHEKSI-SDMQFSPDL 230 (369)
T ss_dssp CEEEEEEC--------GGGCEEEEEETT----------------SEEEEEETTTT-TEEEEEEECCSSCE-EEEEECTTS
T ss_pred ceeEEEEc--------CCCCEEEEEcCC----------------CEEEEEECCCC-cEeEEEEecCCCce-eEEEECCCC
Confidence 11111111 267778887754 13566776421 111111 2222233 233557899
Q ss_pred cEEEEcCcCCCCCCcccCCCCCCccEEEcCCCCCCCceEecCCCCCCccceeeEeeCCCCeEEEecCCCCC
Q 039705 330 DVLIINGAKKGTAGWNFATDPNTTPVLYEPDDPINERFSELTPTSKPRMCHSTSVVLPDGKILVAGSNPHS 400 (539)
Q Consensus 330 ~I~vvGG~~~g~~g~~~~~~~~~~~e~YdP~t~~g~~Wt~~a~~~~~R~yhs~a~llpdG~V~v~GG~~~~ 400 (539)
+.+++++.+ + .+.+||..+. +....-. .. .......+.|+|+.+++|+....
T Consensus 231 ~~l~~~~~d-~------------~i~v~d~~~~---~~~~~~~--~~-~~~~~~~~~~~~~~l~~~~~~~~ 282 (369)
T 3zwl_B 231 TYFITSSRD-T------------NSFLVDVSTL---QVLKKYE--TD-CPLNTAVITPLKEFIILGGGQEA 282 (369)
T ss_dssp SEEEEEETT-S------------EEEEEETTTC---CEEEEEE--CS-SCEEEEEECSSSSEEEEEECCC-
T ss_pred CEEEEecCC-c------------eEEEEECCCC---ceeeeec--CC-CCceeEEecCCCceEEEeecCCC
Confidence 999988765 2 5789998876 4322111 11 11234556799999999987553
No 121
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=96.17 E-value=0.19 Score=50.35 Aligned_cols=113 Identities=14% Similarity=0.019 Sum_probs=55.6
Q ss_pred cEEEecCCCCCCCeEEEEeCCCCccc------eeeccccccc---ccccceeEEc----cCCcE-EEEcCccCCeEEEE-
Q 039705 113 TIVISGGWSSRGRSVRYLSGCYHACY------WKEHHWELSA---KRWFSTQHIL----PDGSF-IVVGGRREFSYEYI- 177 (539)
Q Consensus 113 ~l~v~GG~~~g~~~v~~ydP~~~t~~------W~~~~~~m~~---~R~y~s~~~L----~dG~V-yvvGG~~~~~~E~y- 177 (539)
+++++|+.. ..+++||.. +.+ +..+.. ... ...-.+.+.. ++++. +++|+.++ .+.+|
T Consensus 82 ~~l~s~~~d---g~i~iw~~~--~~~~~~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg-~i~iwd 154 (397)
T 1sq9_A 82 CLVATTSFS---GDLLFYRIT--REDETKKVIFEKLDL-LDSDMKKHSFWALKWGASNDRLLSHRLVATDVKG-TTYIWK 154 (397)
T ss_dssp EEEEEEETT---SCEEEEEEE--ECTTTCCEEEEEECC-SCTTGGGSCEEEEEEECCC----CEEEEEEETTS-CEEEEE
T ss_pred cEEEEEcCC---CCEEEEEcc--CCcccccccceeecc-cccccCCCcEEEEEEeeccCCCCceEEEEEeCCC-cEEEEe
Confidence 888988763 568888876 443 544432 110 1222234445 68888 88887664 45566
Q ss_pred ecC------C-CcceeeccCccc-----cCCCCCCCCcceEEEeeCCcEEEEEcC--ceeEeeCCCCeEEEEc
Q 039705 178 LKE------G-KRIIYDLPILNE-----TTNPSENNLYPFVFLSTDGNLFIFAND--RSILLNPETNEILHVF 236 (539)
Q Consensus 178 P~~------~-~~~w~~~~~l~~-----~~~~~~~~~yp~~~~~~~G~Iyv~Gg~--~~e~yDp~tn~W~~~~ 236 (539)
..+ . .-.|.....+.. .... ..-..+...++| ++++|+. .+.+||..+.+....+
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~ 223 (397)
T 1sq9_A 155 FHPFADESNSLTLNWSPTLELQGTVESPMTPS---QFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNF 223 (397)
T ss_dssp EESSSSHHHHTTTCCCCEEEEEEEECCSSSSC---CCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEE
T ss_pred CCccccccccceeeccCcceeeeeeccccCCC---CCceEEEECCCc-eEEEEeCCCcEEEEECCCCceeEEE
Confidence 333 1 001110001100 0000 001123345678 8888875 4788999987765434
No 122
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=96.13 E-value=2.3 Score=47.36 Aligned_cols=248 Identities=10% Similarity=0.050 Sum_probs=121.2
Q ss_pred EEEECCCCCEEeCcc---CCCcccccceecCCCcEEEecCCCCCCCeEEEEeCCCCccceeecccc-cccccccceeEEc
Q 039705 83 VEYDAESAAIRPLKI---LTDTWSSSGGLSANGTIVISGGWSSRGRSVRYLSGCYHACYWKEHHWE-LSAKRWFSTQHIL 158 (539)
Q Consensus 83 ~~yDp~t~~w~~l~~---~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydP~~~t~~W~~~~~~-m~~~R~y~s~~~L 158 (539)
.+||+.+++++.... ........-....+|+|++ |.. ...+.+||+. +.+++..... +.... -.+.+.-
T Consensus 386 ~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lWi-gt~---~~Gl~~~~~~--~~~~~~~~~~~~~~~~-v~~i~~d 458 (781)
T 3v9f_A 386 NVFENGKRVAIYNKENRELLSNSVLCSLKDSEGNLWF-GTY---LGNISYYNTR--LKKFQIIELEKNELLD-VRVFYED 458 (781)
T ss_dssp EEEETTEEEEECC-----CCCSBEEEEEECTTSCEEE-EET---TEEEEEECSS--SCEEEECCSTTTCCCC-EEEEEEC
T ss_pred EEEECCCCeEEEccCCCCCCCcceEEEEECCCCCEEE-Eec---cCCEEEEcCC--CCcEEEeccCCCCCCe-EEEEEEC
Confidence 457777766665421 1111111111224677777 322 1357889998 7777765421 22111 1223333
Q ss_pred cCCcEEEEcCccCCeEEEE-ecCCCcceeeccCccccCCCCCCCCcceEE-EeeCCcEEEEEc-CceeEeeCCCCeEEEE
Q 039705 159 PDGSFIVVGGRREFSYEYI-LKEGKRIIYDLPILNETTNPSENNLYPFVF-LSTDGNLFIFAN-DRSILLNPETNEILHV 235 (539)
Q Consensus 159 ~dG~VyvvGG~~~~~~E~y-P~~~~~~w~~~~~l~~~~~~~~~~~yp~~~-~~~~G~Iyv~Gg-~~~e~yDp~tn~W~~~ 235 (539)
.+|++++... ..+-+| +.++ ++......... ... ..+.... .-.+|+|++... ....+||+.++++. .
T Consensus 459 ~~g~lwigt~---~Gl~~~~~~~~--~~~~~~~~~~~--~~~-~~~i~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~~-~ 529 (781)
T 3v9f_A 459 KNKKIWIGTH---AGVFVIDLASK--KVIHHYDTSNS--QLL-ENFVRSIAQDSEGRFWIGTFGGGVGIYTPDMQLVR-K 529 (781)
T ss_dssp TTSEEEEEET---TEEEEEESSSS--SCCEEECTTTS--SCS-CSCEEEEEECTTCCEEEEESSSCEEEECTTCCEEE-E
T ss_pred CCCCEEEEEC---CceEEEeCCCC--eEEecccCccc--ccc-cceeEEEEEcCCCCEEEEEcCCCEEEEeCCCCeEE-E
Confidence 4688877432 235566 6654 55322111100 000 1122222 234789988764 56889999999887 4
Q ss_pred cccCCCCCCccCCCccEEecccccCCCCCCCcccEEEEecCCCCCcccccCCCcccccCCceEEEEeeCCCCceee---e
Q 039705 236 FPILRGGSRNYPASATSALLPIKLQDPNSNAIRAEVLICGGAKPEAGVLAGKGEFMNALQDCGRIEITNKSATWQR---E 312 (539)
Q Consensus 236 ~p~mp~~~r~yp~~g~av~lpl~~~~~~~~~~~g~Iyv~GG~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~---~ 312 (539)
+..-.+.+.+ ....++. + .+|+|++... . |- +.+||+. +.+++. .
T Consensus 530 ~~~~~~l~~~----~i~~i~~-------d--~~g~lWi~T~-~-Gl---------------v~~~d~~--~~~~~~~~~~ 577 (781)
T 3v9f_A 530 FNQYEGFCSN----TINQIYR-------S--SKGQMWLATG-E-GL---------------VCFPSAR--NFDYQVFQRK 577 (781)
T ss_dssp ECTTTTCSCS----CEEEEEE-------C--TTSCEEEEET-T-EE---------------EEESCTT--TCCCEEECGG
T ss_pred ccCCCCCCCC----eeEEEEE-------C--CCCCEEEEEC-C-Cc---------------eEEECCC--CCcEEEcccc
Confidence 4321110111 1111211 1 2677777533 1 11 1344432 233332 1
Q ss_pred -ccCCCceeceeEEecCCcEEEEcCcCCCCCCcccCCCCCCccEEEcCCCCCCCceEecCC---CCCCccceeeEeeCCC
Q 039705 313 -MMPSPRVMGEMLLLPTGDVLIINGAKKGTAGWNFATDPNTTPVLYEPDDPINERFSELTP---TSKPRMCHSTSVVLPD 388 (539)
Q Consensus 313 -~M~~~R~~~~~vvlpdG~I~vvGG~~~g~~g~~~~~~~~~~~e~YdP~t~~g~~Wt~~a~---~~~~R~yhs~a~llpd 388 (539)
.++..... +.+.-.+|+|++.+ .+ | +.+|||++. +++.... ++.......+++..+|
T Consensus 578 ~gl~~~~i~-~i~~d~~g~lW~~t-~~-G-------------l~~~~~~~~---~~~~~~~~dGl~~~~f~~~~~~~~~~ 638 (781)
T 3v9f_A 578 EGLPNTHIR-AISEDKNGNIWAST-NT-G-------------ISCYITSKK---CFYTYDHSNNIPQGSFISGCVTKDHN 638 (781)
T ss_dssp GTCSCCCCC-EEEECSSSCEEEEC-SS-C-------------EEEEETTTT---EEEEECGGGTCCSSCEEEEEEEECTT
T ss_pred CCCCCceEE-EEEECCCCCEEEEc-CC-c-------------eEEEECCCC---ceEEecccCCccccccccCceEECCC
Confidence 24443332 33444679998854 22 2 468999988 8776432 3222222234566789
Q ss_pred CeEEEecCC
Q 039705 389 GKILVAGSN 397 (539)
Q Consensus 389 G~V~v~GG~ 397 (539)
|++|++|.+
T Consensus 639 G~l~~g~~~ 647 (781)
T 3v9f_A 639 GLIYFGSIN 647 (781)
T ss_dssp SCEEEEETT
T ss_pred CEEEEECCC
Confidence 999998764
No 123
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=96.11 E-value=0.8 Score=44.49 Aligned_cols=140 Identities=14% Similarity=0.114 Sum_probs=73.2
Q ss_pred eEEEEECCCCCEEeCccCCCc-ccccceecCCCc-EEEecCCCCCCCeEEEEeCCCCccceeeccccccc-----ccccc
Q 039705 81 LAVEYDAESAAIRPLKILTDT-WSSSGGLSANGT-IVISGGWSSRGRSVRYLSGCYHACYWKEHHWELSA-----KRWFS 153 (539)
Q Consensus 81 ~~~~yDp~t~~w~~l~~~~~~-~c~~~~~l~dG~-l~v~GG~~~g~~~v~~ydP~~~t~~W~~~~~~m~~-----~R~y~ 153 (539)
...+||+.+++....-..... .....++.+||+ +|+.+.. ...+.+||+. +.+-...-. +.. ...-.
T Consensus 22 ~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~---~~~i~~~d~~--t~~~~~~~~-~~~~~~~~~~~~~ 95 (349)
T 1jmx_B 22 NLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNH---YGDIYGIDLD--TCKNTFHAN-LSSVPGEVGRSMY 95 (349)
T ss_dssp EEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETT---TTEEEEEETT--TTEEEEEEE-SCCSTTEEEECSS
T ss_pred eEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCC---CCcEEEEeCC--CCcEEEEEE-ccccccccccccc
Confidence 356788888766432222221 122334567887 5566532 3679999987 554332111 211 11123
Q ss_pred eeEEccCCcEEEEcCcc-----------CCeEEEE-ecCCCccee-eccCccccCCCCCCCCcce-EEEeeCCcEEEEEc
Q 039705 154 TQHILPDGSFIVVGGRR-----------EFSYEYI-LKEGKRIIY-DLPILNETTNPSENNLYPF-VFLSTDGNLFIFAN 219 (539)
Q Consensus 154 s~~~L~dG~VyvvGG~~-----------~~~~E~y-P~~~~~~w~-~~~~l~~~~~~~~~~~yp~-~~~~~~G~Iyv~Gg 219 (539)
..+.-+||+.++++..+ ...+.+| ..++ +-. ........ ..+. +...+||++|+ ++
T Consensus 96 ~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~--~~~~~~~~~~~~-------~~~~~~~~s~dg~l~~-~~ 165 (349)
T 1jmx_B 96 SFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADG--LEAKPVRTFPMP-------RQVYLMRAADDGSLYV-AG 165 (349)
T ss_dssp CEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGG--GGBCCSEEEECC-------SSCCCEEECTTSCEEE-ES
T ss_pred ceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCc--cccceeeeccCC-------CcccceeECCCCcEEE-cc
Confidence 44556689877777643 3456666 4432 110 00000000 0112 23457999776 56
Q ss_pred CceeEeeCCCCeEEEEc
Q 039705 220 DRSILLNPETNEILHVF 236 (539)
Q Consensus 220 ~~~e~yDp~tn~W~~~~ 236 (539)
.++.+||..+++....+
T Consensus 166 ~~i~~~d~~~~~~~~~~ 182 (349)
T 1jmx_B 166 PDIYKMDVKTGKYTVAL 182 (349)
T ss_dssp SSEEEECTTTCCEEEEE
T ss_pred CcEEEEeCCCCceeccc
Confidence 67999999988765434
No 124
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=96.11 E-value=0.93 Score=45.13 Aligned_cols=195 Identities=12% Similarity=0.081 Sum_probs=99.8
Q ss_pred eecCCC-cEEEecCCCCCCCeEEEEeCCCCccceeecccccc-cccccceeEEcc-CCcEEEEcCccCCeEEEE-ecCCC
Q 039705 107 GLSANG-TIVISGGWSSRGRSVRYLSGCYHACYWKEHHWELS-AKRWFSTQHILP-DGSFIVVGGRREFSYEYI-LKEGK 182 (539)
Q Consensus 107 ~~l~dG-~l~v~GG~~~g~~~v~~ydP~~~t~~W~~~~~~m~-~~R~y~s~~~L~-dG~VyvvGG~~~~~~E~y-P~~~~ 182 (539)
...++| +++++|+.+ ..+++||.. +.+....-. +. ....-.+.+..+ |++.+++|+.+ ..+.+| ....
T Consensus 80 ~~~~~~~~~l~s~~~d---g~i~iwd~~--~~~~~~~~~-~~~h~~~v~~~~~~~~~~~~l~s~~~d-~~i~iwd~~~~- 151 (383)
T 3ei3_B 80 EWHPTHPTTVAVGSKG---GDIILWDYD--VQNKTSFIQ-GMGPGDAITGMKFNQFNTNQLFVSSIR-GATTLRDFSGS- 151 (383)
T ss_dssp EECSSCTTEEEEEEBT---SCEEEEETT--STTCEEEEC-CCSTTCBEEEEEEETTEEEEEEEEETT-TEEEEEETTSC-
T ss_pred EECCCCCCEEEEEcCC---CeEEEEeCC--Ccccceeee-cCCcCCceeEEEeCCCCCCEEEEEeCC-CEEEEEECCCC-
Confidence 445678 899998763 578999987 555443221 11 112222344445 56777777665 456666 3322
Q ss_pred cceeeccCccccCCCCCCCCcceEEEeeCCcEEEEEcC--ceeEeeCCCCeEEEEcccCCCCCCccCCCccEEecccccC
Q 039705 183 RIIYDLPILNETTNPSENNLYPFVFLSTDGNLFIFAND--RSILLNPETNEILHVFPILRGGSRNYPASATSALLPIKLQ 260 (539)
Q Consensus 183 ~~w~~~~~l~~~~~~~~~~~yp~~~~~~~G~Iyv~Gg~--~~e~yDp~tn~W~~~~p~mp~~~r~yp~~g~av~lpl~~~ 260 (539)
............ ..--.+...++|++++.|+. .+.+||....... .+ .. .... .-.....|
T Consensus 152 -~~~~~~~~~~~~-----~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~-~~---~~-h~~~--v~~~~~~~---- 214 (383)
T 3ei3_B 152 -VIQVFAKTDSWD-----YWYCCVDVSVSRQMLATGDSTGRLLLLGLDGHEIF-KE---KL-HKAK--VTHAEFNP---- 214 (383)
T ss_dssp -EEEEEECCCCSS-----CCEEEEEEETTTTEEEEEETTSEEEEEETTSCEEE-EE---EC-SSSC--EEEEEECS----
T ss_pred -ceEEEeccCCCC-----CCeEEEEECCCCCEEEEECCCCCEEEEECCCCEEE-Ee---cc-CCCc--EEEEEECC----
Confidence 222211111000 00112234578999998875 4778998544433 23 11 1110 01122221
Q ss_pred CCCCCCcccE-EEEecCCCCCcccccCCCcccccCCceEEEEeeCCCCceeee-ccCCCceeceeEEec-CCcEEEEcCc
Q 039705 261 DPNSNAIRAE-VLICGGAKPEAGVLAGKGEFMNALQDCGRIEITNKSATWQRE-MMPSPRVMGEMLLLP-TGDVLIINGA 337 (539)
Q Consensus 261 ~~~~~~~~g~-Iyv~GG~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~-~M~~~R~~~~~vvlp-dG~I~vvGG~ 337 (539)
+++ ++++|+.+. .+..+|+......-... .+.....-.+....| ||+.+++++.
T Consensus 215 -------~~~~~l~s~~~d~----------------~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~~~~~ 271 (383)
T 3ei3_B 215 -------RCDWLMATSSVDA----------------TVKLWDLRNIKDKNSYIAEMPHEKPVNAAYFNPTDSTKLLTTDQ 271 (383)
T ss_dssp -------SCTTEEEEEETTS----------------EEEEEEGGGCCSTTCEEEEEECSSCEEEEEECTTTSCEEEEEES
T ss_pred -------CCCCEEEEEeCCC----------------EEEEEeCCCCCcccceEEEecCCCceEEEEEcCCCCCEEEEEcC
Confidence 455 788887651 35567765322111111 121222222334567 9999999886
Q ss_pred CCCCCCcccCCCCCCccEEEcCCCC
Q 039705 338 KKGTAGWNFATDPNTTPVLYEPDDP 362 (539)
Q Consensus 338 ~~g~~g~~~~~~~~~~~e~YdP~t~ 362 (539)
+ + ++.+||..+.
T Consensus 272 d-~------------~i~iwd~~~~ 283 (383)
T 3ei3_B 272 R-N------------EIRVYSSYDW 283 (383)
T ss_dssp S-S------------EEEEEETTBT
T ss_pred C-C------------cEEEEECCCC
Confidence 5 2 5788888765
No 125
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=96.04 E-value=1.3 Score=43.83 Aligned_cols=217 Identities=11% Similarity=0.042 Sum_probs=106.0
Q ss_pred CCcEEEecCCCCCCCeEEEEeCCCCccceeecccccccccccceeEEccCCcEEEEcCccCCeEEEE-ecCCCcceeecc
Q 039705 111 NGTIVISGGWSSRGRSVRYLSGCYHACYWKEHHWELSAKRWFSTQHILPDGSFIVVGGRREFSYEYI-LKEGKRIIYDLP 189 (539)
Q Consensus 111 dG~l~v~GG~~~g~~~v~~ydP~~~t~~W~~~~~~m~~~R~y~s~~~L~dG~VyvvGG~~~~~~E~y-P~~~~~~w~~~~ 189 (539)
+++++++|-. .. +|-..++..+|+++......+-.....+...++++|++|... .+| ......+|....
T Consensus 89 ~~~~~~~g~~----g~--i~~S~DgG~tW~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~g----~v~~S~DgG~tW~~~~ 158 (327)
T 2xbg_A 89 GNEGWIVGEP----PI--MLHTTDGGQSWSQIPLDPKLPGSPRLIKALGNGSAEMITNVG----AIYRTKDSGKNWQALV 158 (327)
T ss_dssp TTEEEEEEET----TE--EEEESSTTSSCEECCCCTTCSSCEEEEEEEETTEEEEEETTC----CEEEESSTTSSEEEEE
T ss_pred CCeEEEEECC----Ce--EEEECCCCCCceECccccCCCCCeEEEEEECCCCEEEEeCCc----cEEEEcCCCCCCEEee
Confidence 5778877532 12 222222257899875311111111234445678999887532 255 433345786442
Q ss_pred CccccCCCCCCCCcceEEEeeCCcEEEEEcCce-eEe-eCCCCeEEEEcccCCCCCCccCCCccEEecccccCCCCCCCc
Q 039705 190 ILNETTNPSENNLYPFVFLSTDGNLFIFANDRS-ILL-NPETNEILHVFPILRGGSRNYPASATSALLPIKLQDPNSNAI 267 (539)
Q Consensus 190 ~l~~~~~~~~~~~yp~~~~~~~G~Iyv~Gg~~~-e~y-Dp~tn~W~~~~p~mp~~~r~yp~~g~av~lpl~~~~~~~~~~ 267 (539)
.... ..++ .+...++|+++++|.... .+- |....+|+ .+.. +. .... ...+.. .
T Consensus 159 ~~~~------~~~~-~~~~~~~~~~~~~g~~G~~~~S~d~gG~tW~-~~~~-~~-~~~~---~~~~~~-----------~ 214 (327)
T 2xbg_A 159 QEAI------GVMR-NLNRSPSGEYVAVSSRGSFYSTWEPGQTAWE-PHNR-TT-SRRL---HNMGFT-----------P 214 (327)
T ss_dssp CSCC------CCEE-EEEECTTSCEEEEETTSSEEEEECTTCSSCE-EEEC-CS-SSCE---EEEEEC-----------T
T ss_pred cCCC------cceE-EEEEcCCCcEEEEECCCcEEEEeCCCCCcee-ECCC-CC-CCcc---ceeEEC-----------C
Confidence 2111 0111 223345788887774332 222 33357887 4432 21 1121 112221 1
Q ss_pred ccEEEEecCCCCCcccccCCCcccccCCceEEEEeeCCCCceeeec---cCCCceeceeEEecCCcEEEEcCcCCCCCCc
Q 039705 268 RAEVLICGGAKPEAGVLAGKGEFMNALQDCGRIEITNKSATWQREM---MPSPRVMGEMLLLPTGDVLIINGAKKGTAGW 344 (539)
Q Consensus 268 ~g~Iyv~GG~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~~---M~~~R~~~~~vvlpdG~I~vvGG~~~g~~g~ 344 (539)
++++|+++... . +.+.+ .+...+|+... ++........+..+++++|++|+. |
T Consensus 215 ~g~~~~~~~~G--~---------------~~~s~-~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~~--g---- 270 (327)
T 2xbg_A 215 DGRLWMIVNGG--K---------------IAFSD-PDNSENWGELLSPLRRNSVGFLDLAYRTPNEVWLAGGA--G---- 270 (327)
T ss_dssp TSCEEEEETTT--E---------------EEEEE-TTEEEEECCCBCTTSSCCSCEEEEEESSSSCEEEEEST--T----
T ss_pred CCCEEEEeCCc--e---------------EEEec-CCCCCeeEeccCCcccCCcceEEEEecCCCEEEEEeCC--C----
Confidence 67888776421 1 11111 11246788753 434333334344568999998763 2
Q ss_pred ccCCCCCCccEEEcCCCCCCCceEecCC-CCCCccceeeEeeCCCCeEEEecCC
Q 039705 345 NFATDPNTTPVLYEPDDPINERFSELTP-TSKPRMCHSTSVVLPDGKILVAGSN 397 (539)
Q Consensus 345 ~~~~~~~~~~e~YdP~t~~g~~Wt~~a~-~~~~R~yhs~a~llpdG~V~v~GG~ 397 (539)
.+ |- .+|.|++|+.+.. ...+..+++++.. .+++++++|..
T Consensus 271 --------~i--~~-S~DgG~tW~~~~~~~~~~~~~~~v~~~-~~~~~~~~G~~ 312 (327)
T 2xbg_A 271 --------AL--LC-SQDGGQTWQQDVDVKKVPSNFYKILFF-SPDQGFILGQK 312 (327)
T ss_dssp --------CE--EE-ESSTTSSCEECGGGTTSSSCCCEEEEE-ETTEEEEECST
T ss_pred --------eE--EE-eCCCCcccEEcCccCCCCCCeEEEEEE-CCCceEEEcCC
Confidence 11 21 2345679998763 2334445555543 67888777653
No 126
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=96.02 E-value=0.95 Score=46.39 Aligned_cols=213 Identities=11% Similarity=0.090 Sum_probs=108.7
Q ss_pred eEEEEECCCCCEEeCccCCCc--ccccceecCCCcEEEecCCCCCCCeEEEEeCCCCccceeecc---------------
Q 039705 81 LAVEYDAESAAIRPLKILTDT--WSSSGGLSANGTIVISGGWSSRGRSVRYLSGCYHACYWKEHH--------------- 143 (539)
Q Consensus 81 ~~~~yDp~t~~w~~l~~~~~~--~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydP~~~t~~W~~~~--------------- 143 (539)
...+||..+++....-..+.. .|-.-....++..+++|+.+ ..+.+||.. +..-....
T Consensus 184 ~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d---~~i~vwd~~--~~~~~~~~~~~~~~~~~~~~~~~ 258 (464)
T 3v7d_B 184 TVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRD---NTLHVWKLP--KESSVPDHGEEHDYPLVFHTPEE 258 (464)
T ss_dssp CEEEEETTTTEEEEEECCCSSCEEEEEEEESSSCEEEEEEETT---SCEEEEECC--CCCCC------CCSSEEESCGGG
T ss_pred CEEEEECCCCcEEEEECCCCCccEEEEEecCCCCCEEEEEcCC---CcEEEeeCC--CCcccccccccCCcceEeeccCC
Confidence 366789887764433222221 22111112578899998763 567888875 32211000
Q ss_pred -----cccccccccceeEEccCCcEEEEcCccCCeEEEE-ecCCCccee-eccCccccCCCCCCCCcceEEEeeCCcEEE
Q 039705 144 -----WELSAKRWFSTQHILPDGSFIVVGGRREFSYEYI-LKEGKRIIY-DLPILNETTNPSENNLYPFVFLSTDGNLFI 216 (539)
Q Consensus 144 -----~~m~~~R~y~s~~~L~dG~VyvvGG~~~~~~E~y-P~~~~~~w~-~~~~l~~~~~~~~~~~yp~~~~~~~G~Iyv 216 (539)
..+. .......+.-.+++.+++|+.++ .+.+| ..+. +.. ... .... ..+ .....++|+.++
T Consensus 259 ~~~~~~~~~-~~~~~v~~~~~~~~~l~~~~~d~-~i~vwd~~~~--~~~~~~~---~~~~----~v~-~~~~~~~~~~l~ 326 (464)
T 3v7d_B 259 NPYFVGVLR-GHMASVRTVSGHGNIVVSGSYDN-TLIVWDVAQM--KCLYILS---GHTD----RIY-STIYDHERKRCI 326 (464)
T ss_dssp CTTEEEEEC-CCSSCEEEEEEETTEEEEEETTS-CEEEEETTTT--EEEEEEC---CCSS----CEE-EEEEETTTTEEE
T ss_pred CeEEEEEcc-CccceEEEEcCCCCEEEEEeCCC-eEEEEECCCC--cEEEEec---CCCC----CEE-EEEEcCCCCEEE
Confidence 0011 11111122334788888888764 46666 3332 221 111 1100 111 223446888888
Q ss_pred EEcC--ceeEeeCCCCeEEEEcccCCCCCCccCCCccEEecccccCCCCCCCcccEEEEecCCCCCcccccCCCcccccC
Q 039705 217 FAND--RSILLNPETNEILHVFPILRGGSRNYPASATSALLPIKLQDPNSNAIRAEVLICGGAKPEAGVLAGKGEFMNAL 294 (539)
Q Consensus 217 ~Gg~--~~e~yDp~tn~W~~~~p~mp~~~r~yp~~g~av~lpl~~~~~~~~~~~g~Iyv~GG~~~~~~~~~~~~~~~~a~ 294 (539)
.|+. .+.+||..+++-.+.+ .. ... ....+ . .+++.+++|+.+.
T Consensus 327 sg~~dg~i~vwd~~~~~~~~~~---~~-h~~----~v~~~-~----------~~~~~l~s~s~dg--------------- 372 (464)
T 3v7d_B 327 SASMDTTIRIWDLENGELMYTL---QG-HTA----LVGLL-R----------LSDKFLVSAAADG--------------- 372 (464)
T ss_dssp EEETTSCEEEEETTTTEEEEEE---CC-CSS----CEEEE-E----------ECSSEEEEEETTS---------------
T ss_pred EEeCCCcEEEEECCCCcEEEEE---eC-CCC----cEEEE-E----------EcCCEEEEEeCCC---------------
Confidence 8875 4788999888754333 22 111 11111 1 2567778877651
Q ss_pred CceEEEEeeCCCCceeeeccCCCceeceeEEecCCcEEEEcCcCCCCCCcccCCCCCCccEEEcCCCC
Q 039705 295 QDCGRIEITNKSATWQREMMPSPRVMGEMLLLPTGDVLIINGAKKGTAGWNFATDPNTTPVLYEPDDP 362 (539)
Q Consensus 295 ~s~~~~d~~~~~~~W~~~~M~~~R~~~~~vvlpdG~I~vvGG~~~g~~g~~~~~~~~~~~e~YdP~t~ 362 (539)
.+..+|+......+... ...........++|+++++|+ + | .+.+||.++.
T Consensus 373 -~v~vwd~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~~-d-g------------~i~iwd~~~g 422 (464)
T 3v7d_B 373 -SIRGWDANDYSRKFSYH---HTNLSAITTFYVSDNILVSGS-E-N------------QFNIYNLRSG 422 (464)
T ss_dssp -EEEEEETTTCCEEEEEE---CTTCCCEEEEEECSSEEEEEE-T-T------------EEEEEETTTC
T ss_pred -cEEEEECCCCceeeeec---CCCCccEEEEEeCCCEEEEec-C-C------------eEEEEECCCC
Confidence 35567765322222221 111222334567999999887 3 2 5799999988
No 127
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=96.02 E-value=0.21 Score=48.88 Aligned_cols=235 Identities=8% Similarity=0.126 Sum_probs=108.6
Q ss_pred cCCC-cEEEecCCCCCCCeEEEEeCCCCccceeecccccccccccceeEEccC---CcEEEEcCccCCeEEEE-ecCCCc
Q 039705 109 SANG-TIVISGGWSSRGRSVRYLSGCYHACYWKEHHWELSAKRWFSTQHILPD---GSFIVVGGRREFSYEYI-LKEGKR 183 (539)
Q Consensus 109 l~dG-~l~v~GG~~~g~~~v~~ydP~~~t~~W~~~~~~m~~~R~y~s~~~L~d---G~VyvvGG~~~~~~E~y-P~~~~~ 183 (539)
.++| +++++|+...+...+++||.. +.+...... ......-.+.+..++ |+++++|+.++ .+.+| ..+...
T Consensus 27 ~p~~~~l~~~~s~~~~d~~v~iw~~~--~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~l~~~~~dg-~i~iwd~~~~~~ 102 (357)
T 3i2n_A 27 VPCSAKFVTMGNFARGTGVIQLYEIQ--HGDLKLLRE-IEKAKPIKCGTFGATSLQQRYLATGDFGG-NLHIWNLEAPEM 102 (357)
T ss_dssp CTTSSEEEEEEC--CCCEEEEEEEEC--SSSEEEEEE-EEESSCEEEEECTTCCTTTCCEEEEETTS-CEEEECTTSCSS
T ss_pred cCCCceEEEecCccCCCcEEEEEeCC--CCcccceee-ecccCcEEEEEEcCCCCCCceEEEecCCC-eEEEEeCCCCCc
Confidence 4566 566677652224688999987 555443321 222222233344445 68888887653 45666 433200
Q ss_pred ceeeccCccccCCCCCCCCcceEE-----EeeCCcEEEEEcC--ceeEeeCCCCe-EEEEcccCCCCCCccCCCccEEec
Q 039705 184 IIYDLPILNETTNPSENNLYPFVF-----LSTDGNLFIFAND--RSILLNPETNE-ILHVFPILRGGSRNYPASATSALL 255 (539)
Q Consensus 184 ~w~~~~~l~~~~~~~~~~~yp~~~-----~~~~G~Iyv~Gg~--~~e~yDp~tn~-W~~~~p~mp~~~r~yp~~g~av~l 255 (539)
...... .... ......+ ..++|++++.|+. .+.+||..+.+ -...+....+.... .-.++.+
T Consensus 103 ~~~~~~---~~~~----~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~---~v~~~~~ 172 (357)
T 3i2n_A 103 PVYSVK---GHKE----IINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQGENKR---DCWTVAF 172 (357)
T ss_dssp CSEEEC---CCSS----CEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECCCTTSCCC---CEEEEEE
T ss_pred cEEEEE---eccc----ceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcceeccccCCCCCC---ceEEEEE
Confidence 011111 1100 0000001 1367888888875 47789988764 11123222211000 0011110
Q ss_pred c--cccCCCCCCCcccEEEEecCCCCCcccccCCCcccccCCceEEEEeeCCCCceeeeccCCCceeceeEEec---CCc
Q 039705 256 P--IKLQDPNSNAIRAEVLICGGAKPEAGVLAGKGEFMNALQDCGRIEITNKSATWQREMMPSPRVMGEMLLLP---TGD 330 (539)
Q Consensus 256 p--l~~~~~~~~~~~g~Iyv~GG~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~~M~~~R~~~~~vvlp---dG~ 330 (539)
. .. .+++++++|+.+. .+..+|+......+.. .. .... ......| +++
T Consensus 173 ~~~~~--------~~~~~l~~~~~d~----------------~i~i~d~~~~~~~~~~-~~-~~~v-~~~~~~~~~~~~~ 225 (357)
T 3i2n_A 173 GNAYN--------QEERVVCAGYDNG----------------DIKLFDLRNMALRWET-NI-KNGV-CSLEFDRKDISMN 225 (357)
T ss_dssp ECCCC---------CCCEEEEEETTS----------------EEEEEETTTTEEEEEE-EC-SSCE-EEEEESCSSSSCC
T ss_pred EeccC--------CCCCEEEEEccCC----------------eEEEEECccCceeeec-CC-CCce-EEEEcCCCCCCCC
Confidence 0 11 2677888887541 3556776421111111 11 1122 2334456 899
Q ss_pred EEEEcCcCCCCCCcccCCCCCCccEEEcCCCCCC-CceEecCCCCCCccceeeEeeCCCCe-EEEecCCC
Q 039705 331 VLIINGAKKGTAGWNFATDPNTTPVLYEPDDPIN-ERFSELTPTSKPRMCHSTSVVLPDGK-ILVAGSNP 398 (539)
Q Consensus 331 I~vvGG~~~g~~g~~~~~~~~~~~e~YdP~t~~g-~~Wt~~a~~~~~R~yhs~a~llpdG~-V~v~GG~~ 398 (539)
.+++|+.+ | .+.+||..+... .++...........- ....+.|||+ ++++|+.+
T Consensus 226 ~l~~~~~d-g------------~i~i~d~~~~~~~~~~~~~~~~~~~~~v-~~~~~~~~~~~~l~~~~~d 281 (357)
T 3i2n_A 226 KLVATSLE-G------------KFHVFDMRTQHPTKGFASVSEKAHKSTV-WQVRHLPQNRELFLTAGGA 281 (357)
T ss_dssp EEEEEEST-T------------EEEEEEEEEEETTTEEEEEEEECCSSCE-EEEEEETTEEEEEEEEETT
T ss_pred EEEEECCC-C------------eEEEEeCcCCCcccceeeeccCCCcCCE-EEEEECCCCCcEEEEEeCC
Confidence 99988755 2 578888765411 012110000011111 2234568999 88888863
No 128
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=96.01 E-value=1.3 Score=48.94 Aligned_cols=137 Identities=15% Similarity=0.075 Sum_probs=74.2
Q ss_pred eEEEEECCCCCEEeCccCCCcccccceecCCCcEEEecCCCCCCCeEEEEeCCCCccceeecccccccccccc-eeEEcc
Q 039705 81 LAVEYDAESAAIRPLKILTDTWSSSGGLSANGTIVISGGWSSRGRSVRYLSGCYHACYWKEHHWELSAKRWFS-TQHILP 159 (539)
Q Consensus 81 ~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydP~~~t~~W~~~~~~m~~~R~y~-s~~~L~ 159 (539)
...+||..+++.......+..........++|..+++|+.. ..+.+||.. ++ |..... +....... +++..+
T Consensus 78 ~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d---g~i~vw~~~--~~-~~~~~~-~~~~~~~v~~~~~~p 150 (814)
T 3mkq_A 78 RIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDD---LTVKLWNWE--NN-WALEQT-FEGHEHFVMCVAFNP 150 (814)
T ss_dssp EEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETT---SEEEEEEGG--GT-SEEEEE-EECCSSCEEEEEEET
T ss_pred eEEEEECCCCcEEEEEecCCCCEEEEEEeCCCCEEEEEcCC---CEEEEEECC--CC-ceEEEE-EcCCCCcEEEEEEEc
Confidence 46789988877654333232222233456789988888753 578999986 43 332221 22222222 233344
Q ss_pred -CCcEEEEcCccCCeEEEE-ecCCCcceeeccCccccCCCCCCCCcceEEEee--CCcEEEEEcC--ceeEeeCCCCeEE
Q 039705 160 -DGSFIVVGGRREFSYEYI-LKEGKRIIYDLPILNETTNPSENNLYPFVFLST--DGNLFIFAND--RSILLNPETNEIL 233 (539)
Q Consensus 160 -dG~VyvvGG~~~~~~E~y-P~~~~~~w~~~~~l~~~~~~~~~~~yp~~~~~~--~G~Iyv~Gg~--~~e~yDp~tn~W~ 233 (539)
|++.+++|+.+ .++.+| ......... ...... . .-......+ +|+++++|+. .+.+||..+++-.
T Consensus 151 ~~~~~l~~~~~d-g~v~vwd~~~~~~~~~-~~~~~~--~-----~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~ 221 (814)
T 3mkq_A 151 KDPSTFASGCLD-RTVKVWSLGQSTPNFT-LTTGQE--R-----GVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCV 221 (814)
T ss_dssp TEEEEEEEEETT-SEEEEEETTCSSCSEE-EECCCT--T-----CCCEEEECCSTTCCEEEEECTTSEEEEEETTTTEEE
T ss_pred CCCCEEEEEeCC-CeEEEEECCCCcceeE-EecCCC--C-----CEEEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEE
Confidence 67888888765 356667 333211111 110000 0 011223344 8888888875 4788999887754
No 129
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=96.01 E-value=1.3 Score=44.57 Aligned_cols=213 Identities=16% Similarity=0.127 Sum_probs=108.2
Q ss_pred eEEEEECCCCCEEeCccCCCcccccceecCCCcEEEecCCCCCCCeEEEEeCCCCccceeeccccccc-ccccceeEEcc
Q 039705 81 LAVEYDAESAAIRPLKILTDTWSSSGGLSANGTIVISGGWSSRGRSVRYLSGCYHACYWKEHHWELSA-KRWFSTQHILP 159 (539)
Q Consensus 81 ~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydP~~~t~~W~~~~~~m~~-~R~y~s~~~L~ 159 (539)
...+||..+.+....-..+.... ..+..++.++++|+.. ..+.+||.. ...- .... +.. ...-.+.+..+
T Consensus 157 ~i~iwd~~~~~~~~~~~~~~~~v--~~~~~~~~~l~~~~~d---g~i~i~d~~--~~~~-~~~~-~~~~~~~v~~~~~~~ 227 (401)
T 4aez_A 157 LVDIYDVESQTKLRTMAGHQARV--GCLSWNRHVLSSGSRS---GAIHHHDVR--IANH-QIGT-LQGHSSEVCGLAWRS 227 (401)
T ss_dssp CEEEEETTTCCEEEEECCCSSCE--EEEEEETTEEEEEETT---SEEEEEETT--SSSC-EEEE-EECCSSCEEEEEECT
T ss_pred eEEEEECcCCeEEEEecCCCCce--EEEEECCCEEEEEcCC---CCEEEEecc--cCcc-eeeE-EcCCCCCeeEEEEcC
Confidence 46678888776543322222111 1122378899998763 678999986 2211 1111 211 11122344556
Q ss_pred CCcEEEEcCccCCeEEEE-ecCCCccee-eccCccccCCCCCCCCcceEEEeeC-CcEEEEEc----CceeEeeCCCCeE
Q 039705 160 DGSFIVVGGRREFSYEYI-LKEGKRIIY-DLPILNETTNPSENNLYPFVFLSTD-GNLFIFAN----DRSILLNPETNEI 232 (539)
Q Consensus 160 dG~VyvvGG~~~~~~E~y-P~~~~~~w~-~~~~l~~~~~~~~~~~yp~~~~~~~-G~Iyv~Gg----~~~e~yDp~tn~W 232 (539)
||+.+++|+.++ .+.+| ..+. .-. ... .... . --.....++ ..+++.|+ ..+.+||..+++.
T Consensus 228 ~~~~l~s~~~d~-~v~iwd~~~~--~~~~~~~---~~~~----~-v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~ 296 (401)
T 4aez_A 228 DGLQLASGGNDN-VVQIWDARSS--IPKFTKT---NHNA----A-VKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGAR 296 (401)
T ss_dssp TSSEEEEEETTS-CEEEEETTCS--SEEEEEC---CCSS----C-CCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCE
T ss_pred CCCEEEEEeCCC-eEEEccCCCC--CccEEec---CCcc----e-EEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCE
Confidence 899999988764 46666 3332 111 111 1000 0 012233454 47888775 3478899988775
Q ss_pred EEEcccCCCCCCccCCCccEEecccccCCCCCCCcccE-EEEecCCCCCcccccCCCcccccCCceEEEEeeCCCCceee
Q 039705 233 LHVFPILRGGSRNYPASATSALLPIKLQDPNSNAIRAE-VLICGGAKPEAGVLAGKGEFMNALQDCGRIEITNKSATWQR 311 (539)
Q Consensus 233 ~~~~p~mp~~~r~yp~~g~av~lpl~~~~~~~~~~~g~-Iyv~GG~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~ 311 (539)
.+.+ ...... ......| +++ |++++|... ..+..+|... .....
T Consensus 297 ~~~~---~~~~~v----~~~~~s~-----------~~~~l~~~~g~~d---------------g~i~v~~~~~--~~~~~ 341 (401)
T 4aez_A 297 VNTV---DAGSQV----TSLIWSP-----------HSKEIMSTHGFPD---------------NNLSIWSYSS--SGLTK 341 (401)
T ss_dssp EEEE---ECSSCE----EEEEECS-----------SSSEEEEEECTTT---------------CEEEEEEEET--TEEEE
T ss_pred EEEE---eCCCcE----EEEEECC-----------CCCeEEEEeecCC---------------CcEEEEecCC--cccee
Confidence 5333 111111 1122211 344 444444321 2356677652 33333
Q ss_pred e-c--cCCCceeceeEEecCCcEEEEcCcCCCCCCcccCCCCCCccEEEcCCCC
Q 039705 312 E-M--MPSPRVMGEMLLLPTGDVLIINGAKKGTAGWNFATDPNTTPVLYEPDDP 362 (539)
Q Consensus 312 ~-~--M~~~R~~~~~vvlpdG~I~vvGG~~~g~~g~~~~~~~~~~~e~YdP~t~ 362 (539)
. . -...+.. .....|||+.+++++.+ | ++.+||..+.
T Consensus 342 ~~~~~~h~~~v~-~~~~s~dg~~l~s~~~d-g------------~i~iw~~~~~ 381 (401)
T 4aez_A 342 QVDIPAHDTRVL-YSALSPDGRILSTAASD-E------------NLKFWRVYDG 381 (401)
T ss_dssp EEEEECCSSCCC-EEEECTTSSEEEEECTT-S------------EEEEEECCC-
T ss_pred EEEecCCCCCEE-EEEECCCCCEEEEEeCC-C------------cEEEEECCCC
Confidence 2 2 2233333 33567899999999876 2 5788998776
No 130
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=95.96 E-value=0.7 Score=45.60 Aligned_cols=108 Identities=10% Similarity=0.042 Sum_probs=61.5
Q ss_pred ecC--CCcEEEecCCCCCCCeEEEEeCCCCccceeecccccccccccceeEEccCCcEEEEcCccCCeEEEE-ecCCCcc
Q 039705 108 LSA--NGTIVISGGWSSRGRSVRYLSGCYHACYWKEHHWELSAKRWFSTQHILPDGSFIVVGGRREFSYEYI-LKEGKRI 184 (539)
Q Consensus 108 ~l~--dG~l~v~GG~~~g~~~v~~ydP~~~t~~W~~~~~~m~~~R~y~s~~~L~dG~VyvvGG~~~~~~E~y-P~~~~~~ 184 (539)
..+ +|.++++|+.+ ..+++||.. +.+-..... ........+++.-+||+++++|+.++ .+.+| ..+. +
T Consensus 133 ~~~~~~~~~l~s~s~d---g~i~~wd~~--~~~~~~~~~-~~~~~~i~~~~~~pdg~~lasg~~dg-~i~iwd~~~~--~ 203 (343)
T 3lrv_A 133 GHNEVNTEYFIWADNR---GTIGFQSYE--DDSQYIVHS-AKSDVEYSSGVLHKDSLLLALYSPDG-ILDVYNLSSP--D 203 (343)
T ss_dssp CCC---CCEEEEEETT---CCEEEEESS--SSCEEEEEC-CCSSCCCCEEEECTTSCEEEEECTTS-CEEEEESSCT--T
T ss_pred cCCCCCCCEEEEEeCC---CcEEEEECC--CCcEEEEEe-cCCCCceEEEEECCCCCEEEEEcCCC-EEEEEECCCC--C
Confidence 345 89999998863 578999987 444322211 12222234556677999999998764 56777 4443 2
Q ss_pred ee--eccCccccCCCCCCCCcceEEEeeCCcEEEEEcC-ceeEeeCCCCe
Q 039705 185 IY--DLPILNETTNPSENNLYPFVFLSTDGNLFIFAND-RSILLNPETNE 231 (539)
Q Consensus 185 w~--~~~~l~~~~~~~~~~~yp~~~~~~~G~Iyv~Gg~-~~e~yDp~tn~ 231 (539)
.. .... .... . --.+...++|+.++.|+. .+.+||.++.+
T Consensus 204 ~~~~~~~~--~h~~----~-v~~l~fs~~g~~l~s~~~~~v~iwd~~~~~ 246 (343)
T 3lrv_A 204 QASSRFPV--DEEA----K-IKEVKFADNGYWMVVECDQTVVCFDLRKDV 246 (343)
T ss_dssp SCCEECCC--CTTS----C-EEEEEECTTSSEEEEEESSBEEEEETTSST
T ss_pred CCccEEec--cCCC----C-EEEEEEeCCCCEEEEEeCCeEEEEEcCCCC
Confidence 11 1111 0000 0 001223468988888764 57789988764
No 131
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=95.93 E-value=0.39 Score=51.66 Aligned_cols=226 Identities=12% Similarity=0.120 Sum_probs=116.8
Q ss_pred ecCCCcEEEecCCCCCCCeEEEEeCCCCccceeecccccccccccceeEEccCCcEEEEcCccCCeEEEE-e--cCCCcc
Q 039705 108 LSANGTIVISGGWSSRGRSVRYLSGCYHACYWKEHHWELSAKRWFSTQHILPDGSFIVVGGRREFSYEYI-L--KEGKRI 184 (539)
Q Consensus 108 ~l~dG~l~v~GG~~~g~~~v~~ydP~~~t~~W~~~~~~m~~~R~y~s~~~L~dG~VyvvGG~~~~~~E~y-P--~~~~~~ 184 (539)
+.++|++|+++.. ...+.++|.. +.+-.. . +..+..-+.++.-+||+.+.+++.+ .++.+| . .+. +
T Consensus 145 ~~p~~~~~vs~~~---d~~V~v~D~~--t~~~~~--~-i~~g~~~~~v~~spdg~~l~v~~~d-~~V~v~D~~~~t~--~ 213 (543)
T 1nir_A 145 LDLPNLFSVTLRD---AGQIALVDGD--SKKIVK--V-IDTGYAVHISRMSASGRYLLVIGRD-ARIDMIDLWAKEP--T 213 (543)
T ss_dssp CCGGGEEEEEEGG---GTEEEEEETT--TCCEEE--E-EECSTTEEEEEECTTSCEEEEEETT-SEEEEEETTSSSC--E
T ss_pred cCCCCEEEEEEcC---CCeEEEEECC--CceEEE--E-EecCcccceEEECCCCCEEEEECCC-CeEEEEECcCCCC--c
Confidence 4568999998764 3678999987 554322 1 3322223455567799877777766 677788 5 332 2
Q ss_pred ee-eccCccccCCCCCCCCcceEE-Eee----CCcEEEEEc---CceeEeeCCCCeEEEEcccCC--CCCCcc-C--CCc
Q 039705 185 IY-DLPILNETTNPSENNLYPFVF-LST----DGNLFIFAN---DRSILLNPETNEILHVFPILR--GGSRNY-P--ASA 250 (539)
Q Consensus 185 w~-~~~~l~~~~~~~~~~~yp~~~-~~~----~G~Iyv~Gg---~~~e~yDp~tn~W~~~~p~mp--~~~r~y-p--~~g 250 (539)
-. .++. ...|+.+ ..+ ||+..++++ ..+.+||..+.+-.+.++... .....| | +..
T Consensus 214 ~~~~i~~----------g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~ 283 (543)
T 1nir_A 214 KVAEIKI----------GIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVA 283 (543)
T ss_dssp EEEEEEC----------CSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEE
T ss_pred EEEEEec----------CCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceE
Confidence 21 1111 1123433 446 898766665 457889999887654443211 000001 0 011
Q ss_pred cEEecccccCCCCCCCcccEEEEecCCCCCcccccCCCcccccCCceEEEEeeCCCCceeeeccCCCceeceeEEecCCc
Q 039705 251 TSALLPIKLQDPNSNAIRAEVLICGGAKPEAGVLAGKGEFMNALQDCGRIEITNKSATWQREMMPSPRVMGEMLLLPTGD 330 (539)
Q Consensus 251 ~av~lpl~~~~~~~~~~~g~Iyv~GG~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~~M~~~R~~~~~vvlpdG~ 330 (539)
+.+.-| .+.++|+....+ ..+..+|..+...... ..++..+.-++...-|||+
T Consensus 284 ~i~~s~----------~~~~~~vs~~~~----------------g~i~vvd~~~~~~l~~-~~i~~~~~~~~~~~spdg~ 336 (543)
T 1nir_A 284 AIIASH----------EHPEFIVNVKET----------------GKVLLVNYKDIDNLTV-TSIGAAPFLHDGGWDSSHR 336 (543)
T ss_dssp EEEECS----------SSSEEEEEETTT----------------TEEEEEECTTSSSCEE-EEEECCSSCCCEEECTTSC
T ss_pred EEEECC----------CCCEEEEEECCC----------------CeEEEEEecCCCccee-EEeccCcCccCceECCCCC
Confidence 122211 145666665422 2355666543211111 1222233334445678999
Q ss_pred EEEEcCcCCCCCCcccCCCCCCccEEEcCCCCCCCceEe-cCCCCCCccceeeEeeCCC-CeEEEecC
Q 039705 331 VLIINGAKKGTAGWNFATDPNTTPVLYEPDDPINERFSE-LTPTSKPRMCHSTSVVLPD-GKILVAGS 396 (539)
Q Consensus 331 I~vvGG~~~g~~g~~~~~~~~~~~e~YdP~t~~g~~Wt~-~a~~~~~R~yhs~a~llpd-G~V~v~GG 396 (539)
.+++..... .++.+||.++. +-.. +..-..|+...+.....|| |++|+++.
T Consensus 337 ~l~va~~~~------------~~v~v~D~~tg---~l~~~i~~g~~ph~g~g~~~~~p~~g~~~~s~~ 389 (543)
T 1nir_A 337 YFMTAANNS------------NKVAVIDSKDR---RLSALVDVGKTPHPGRGANFVHPKYGPVWSTSH 389 (543)
T ss_dssp EEEEEEGGG------------TEEEEEETTTT---EEEEEEECSSSBCCTTCEEEEETTTEEEEEEEB
T ss_pred EEEEEecCC------------CeEEEEECCCC---eEEEeeccCCCCCCCCCcccCCCCCccEEEecc
Confidence 554443221 15788999988 5432 2211222222234444576 88999875
No 132
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=95.91 E-value=0.62 Score=47.84 Aligned_cols=228 Identities=13% Similarity=0.074 Sum_probs=107.7
Q ss_pred CCcEEEecCCCCCCCeEEEEeCCCCccceeecccccc-cccccceeEEcc-CCcEEEEcCccCCeEEEE-ecCCCcceee
Q 039705 111 NGTIVISGGWSSRGRSVRYLSGCYHACYWKEHHWELS-AKRWFSTQHILP-DGSFIVVGGRREFSYEYI-LKEGKRIIYD 187 (539)
Q Consensus 111 dG~l~v~GG~~~g~~~v~~ydP~~~t~~W~~~~~~m~-~~R~y~s~~~L~-dG~VyvvGG~~~~~~E~y-P~~~~~~w~~ 187 (539)
++.++++|+.+ ..|.+||.. +.+-...-. +. ....-.+.+..+ |+..++.|+.++ ++.+| ...+ ....
T Consensus 131 ~~~~lasGs~d---g~i~lWd~~--~~~~~~~~~-~~gH~~~V~~l~f~p~~~~~l~s~s~D~-~v~iwd~~~~--~~~~ 201 (435)
T 4e54_B 131 HPSTVAVGSKG---GDIMLWNFG--IKDKPTFIK-GIGAGGSITGLKFNPLNTNQFYASSMEG-TTRLQDFKGN--ILRV 201 (435)
T ss_dssp CTTCEEEEETT---SCEEEECSS--CCSCCEEEC-CCSSSCCCCEEEECSSCTTEEEEECSSS-CEEEEETTSC--EEEE
T ss_pred CCCEEEEEeCC---CEEEEEECC--CCCceeEEE-ccCCCCCEEEEEEeCCCCCEEEEEeCCC-EEEEeeccCC--ceeE
Confidence 67889998763 468999986 443222111 11 112112233332 788888888764 46666 3332 2211
Q ss_pred ccCccccCCCCCCCCcceEEEeeCCcEEEEEcCc--eeEeeCCCCeEEEEcccCCCCCCccCCCccEEecccccCCCCCC
Q 039705 188 LPILNETTNPSENNLYPFVFLSTDGNLFIFANDR--SILLNPETNEILHVFPILRGGSRNYPASATSALLPIKLQDPNSN 265 (539)
Q Consensus 188 ~~~l~~~~~~~~~~~yp~~~~~~~G~Iyv~Gg~~--~e~yDp~tn~W~~~~p~mp~~~r~yp~~g~av~lpl~~~~~~~~ 265 (539)
....... . ...-.....++|++++.|+.+ +.+||.+... +..+.. .... .-+..+-|
T Consensus 202 ~~~~~~~----~-~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~~~----~~~~~~-h~~~--v~~v~~~p--------- 260 (435)
T 4e54_B 202 FASSDTI----N-IWFCSLDVSASSRMVVTGDNVGNVILLNMDGKE----LWNLRM-HKKK--VTHVALNP--------- 260 (435)
T ss_dssp EECCSSC----S-CCCCCEEEETTTTEEEEECSSSBEEEEESSSCB----CCCSBC-CSSC--EEEEEECT---------
T ss_pred EeccCCC----C-ccEEEEEECCCCCEEEEEeCCCcEeeeccCcce----eEEEec-ccce--EEeeeecC---------
Confidence 1100000 0 001123345799999999864 6788876543 222222 1110 01111211
Q ss_pred CcccEEEEecCCCCCcccccCCCcccccCCceEEEEeeCCCCceeee-ccCCCceeceeEEecCCcEEEEcCcCCCCCCc
Q 039705 266 AIRAEVLICGGAKPEAGVLAGKGEFMNALQDCGRIEITNKSATWQRE-MMPSPRVMGEMLLLPTGDVLIINGAKKGTAGW 344 (539)
Q Consensus 266 ~~~g~Iyv~GG~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~-~M~~~R~~~~~vvlpdG~I~vvGG~~~g~~g~ 344 (539)
....++++|+.+. .+..+|+......-... ...+...-.+...-|||+.+++|+.+ +
T Consensus 261 -~~~~~~~s~s~d~----------------~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D-~---- 318 (435)
T 4e54_B 261 -CCDWFLATASVDQ----------------TVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQK-S---- 318 (435)
T ss_dssp -TCSSEEEEEETTS----------------BCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESS-S----
T ss_pred -CCceEEEEecCcc----------------eeeEEecccccccceEEEeeeccccccceeECCCCCeeEEEcCC-C----
Confidence 1345777777651 23456654211111111 11111111122235899999999876 2
Q ss_pred ccCCCCCCccEEEcCCCCCCCceEecCCC--CCCcc-ceeeEeeCCCCeEEEecCCCCC
Q 039705 345 NFATDPNTTPVLYEPDDPINERFSELTPT--SKPRM-CHSTSVVLPDGKILVAGSNPHS 400 (539)
Q Consensus 345 ~~~~~~~~~~e~YdP~t~~g~~Wt~~a~~--~~~R~-yhs~a~llpdG~V~v~GG~~~~ 400 (539)
++.+||..+.. .-..+... ...+. .--.+...+++.++++|+.+..
T Consensus 319 --------~i~iwd~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 367 (435)
T 4e54_B 319 --------EIRVYSASQWD--CPLGLIPHPHRHFQHLTPIKAAWHPRYNLIVVGRYPDP 367 (435)
T ss_dssp --------CEEEEESSSSS--SEEEECCCCCCCCSSSCCCBCEECSSSSCEEEECCCCT
T ss_pred --------EEEEEECCCCc--cceEEecccccccccceeEEEEEcCCCCEEEEEEcCCC
Confidence 57889887641 11111111 11110 0111344678888888876544
No 133
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=95.84 E-value=1.3 Score=43.32 Aligned_cols=135 Identities=16% Similarity=0.153 Sum_probs=70.8
Q ss_pred eEEEEECCCCCEEeCccCCCcccccceecCCCcEEEecCCCCCCCeEEEEeCCCCccceeecccccccccccceeEEcc-
Q 039705 81 LAVEYDAESAAIRPLKILTDTWSSSGGLSANGTIVISGGWSSRGRSVRYLSGCYHACYWKEHHWELSAKRWFSTQHILP- 159 (539)
Q Consensus 81 ~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydP~~~t~~W~~~~~~m~~~R~y~s~~~L~- 159 (539)
...+||..+++-...-..+..........+++.++++|+.+ ..+++||.. ...-..+.. ...+-.+....+
T Consensus 88 ~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D---~~i~vwd~~--~~~~~~~~~---h~~~v~~~~~~~~ 159 (319)
T 3frx_A 88 TLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRD---KTIKVWTIK--GQCLATLLG---HNDWVSQVRVVPN 159 (319)
T ss_dssp EEEEEETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEETT---SCEEEEETT--SCEEEEECC---CSSCEEEEEECCC
T ss_pred EEEEEECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCC---CeEEEEECC--CCeEEEEec---cCCcEEEEEEccC
Confidence 46789998876543222232222233456789999999863 578999986 332211111 111111222222
Q ss_pred -----CCcEEEEcCccCCeEEEE-ecCCCcceeeccCccccCCCCCCCCcceEEEeeCCcEEEEEcCc--eeEeeCCCCe
Q 039705 160 -----DGSFIVVGGRREFSYEYI-LKEGKRIIYDLPILNETTNPSENNLYPFVFLSTDGNLFIFANDR--SILLNPETNE 231 (539)
Q Consensus 160 -----dG~VyvvGG~~~~~~E~y-P~~~~~~w~~~~~l~~~~~~~~~~~yp~~~~~~~G~Iyv~Gg~~--~e~yDp~tn~ 231 (539)
++..++.|+.+ ..+.+| ..+. +-. .. +..... . -..+...++|++++.|+.+ +.+||..+.+
T Consensus 160 ~~~~~~~~~l~s~~~d-~~i~~wd~~~~--~~~-~~-~~~h~~----~-v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~ 229 (319)
T 3frx_A 160 EKADDDSVTIISAGND-KMVKAWNLNQF--QIE-AD-FIGHNS----N-INTLTASPDGTLIASAGKDGEIMLWNLAAKK 229 (319)
T ss_dssp ------CCEEEEEETT-SCEEEEETTTT--EEE-EE-ECCCCS----C-EEEEEECTTSSEEEEEETTCEEEEEETTTTE
T ss_pred CCCCCCccEEEEEeCC-CEEEEEECCcc--hhh-ee-ecCCCC----c-EEEEEEcCCCCEEEEEeCCCeEEEEECCCCc
Confidence 44566766655 456666 3322 111 11 111100 0 0122345799999998854 7889998876
Q ss_pred EE
Q 039705 232 IL 233 (539)
Q Consensus 232 W~ 233 (539)
-.
T Consensus 230 ~~ 231 (319)
T 3frx_A 230 AM 231 (319)
T ss_dssp EE
T ss_pred EE
Confidence 44
No 134
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=95.83 E-value=0.57 Score=45.75 Aligned_cols=91 Identities=7% Similarity=-0.095 Sum_probs=50.8
Q ss_pred eEEEEECCCCCEEeCccCCCcccccceecC-CCcEEEecCCCCCCCeEEEEeCCCCccceeecccccc-cccccceeEEc
Q 039705 81 LAVEYDAESAAIRPLKILTDTWSSSGGLSA-NGTIVISGGWSSRGRSVRYLSGCYHACYWKEHHWELS-AKRWFSTQHIL 158 (539)
Q Consensus 81 ~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~-dG~l~v~GG~~~g~~~v~~ydP~~~t~~W~~~~~~m~-~~R~y~s~~~L 158 (539)
...+||..+.+-...-..+......-...+ ++.++++|+.. ..+++||.. +.+-...-..+. ....-.+.+..
T Consensus 96 ~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~d---g~i~iwd~~--~~~~~~~~~~~~~~~~~v~~~~~~ 170 (366)
T 3k26_A 96 IIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKD---HALRLWNIQ--TDTLVAIFGGVEGHRDEVLSADYD 170 (366)
T ss_dssp EEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETT---SCEEEEETT--TTEEEEEECSTTSCSSCEEEEEEC
T ss_pred EEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCC---CeEEEEEee--cCeEEEEecccccccCceeEEEEC
Confidence 366788877665432222222222334456 89999999863 578999987 443222110011 11222334445
Q ss_pred cCCcEEEEcCccCCeEEEE
Q 039705 159 PDGSFIVVGGRREFSYEYI 177 (539)
Q Consensus 159 ~dG~VyvvGG~~~~~~E~y 177 (539)
++|+.+++|+.++ .+.+|
T Consensus 171 ~~~~~l~~~~~dg-~i~i~ 188 (366)
T 3k26_A 171 LLGEKIMSCGMDH-SLKLW 188 (366)
T ss_dssp TTSSEEEEEETTS-CEEEE
T ss_pred CCCCEEEEecCCC-CEEEE
Confidence 6899999888764 45566
No 135
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=95.78 E-value=1.4 Score=42.06 Aligned_cols=113 Identities=12% Similarity=0.040 Sum_probs=59.3
Q ss_pred cCCCcEEEecCCCCCCCeEEEEeCCCCccceeecccccccccccceeE-Ecc--CCcEEEEcCccCCeEEEE-ecCC---
Q 039705 109 SANGTIVISGGWSSRGRSVRYLSGCYHACYWKEHHWELSAKRWFSTQH-ILP--DGSFIVVGGRREFSYEYI-LKEG--- 181 (539)
Q Consensus 109 l~dG~l~v~GG~~~g~~~v~~ydP~~~t~~W~~~~~~m~~~R~y~s~~-~L~--dG~VyvvGG~~~~~~E~y-P~~~--- 181 (539)
.++|+++++|+.+ ..+++||.......+..... +......-.++ ..+ |++.+++|+.++ .+.+| ....
T Consensus 20 ~~~~~~l~~~~~d---g~i~iw~~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~d~~~l~s~~~dg-~v~vwd~~~~~~~ 94 (351)
T 3f3f_A 20 DFYGRHVATCSSD---QHIKVFKLDKDTSNWELSDS-WRAHDSSIVAIDWASPEYGRIIASASYDK-TVKLWEEDPDQEE 94 (351)
T ss_dssp CSSSSEEEEEETT---SEEEEEEECSSSCCEEEEEE-EECCSSCEEEEEECCGGGCSEEEEEETTS-CEEEEEECTTSCT
T ss_pred cCCCCEEEEeeCC---CeEEEEECCCCCCcceecce-eccCCCcEEEEEEcCCCCCCEEEEEcCCC-eEEEEecCCCccc
Confidence 4688899998753 57888987622333443332 33222222233 333 588999888764 46666 4432
Q ss_pred --CcceeeccCccccCCCCCCCCcceEEEeeC--CcEEEEEcCc--eeEeeCCCCe
Q 039705 182 --KRIIYDLPILNETTNPSENNLYPFVFLSTD--GNLFIFANDR--SILLNPETNE 231 (539)
Q Consensus 182 --~~~w~~~~~l~~~~~~~~~~~yp~~~~~~~--G~Iyv~Gg~~--~e~yDp~tn~ 231 (539)
...|.....+..... . --.+...++ +++++.|+.+ +.+||..+.+
T Consensus 95 ~~~~~~~~~~~~~~~~~----~-v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~ 145 (351)
T 3f3f_A 95 CSGRRWNKLCTLNDSKG----S-LYSVKFAPAHLGLKLACLGNDGILRLYDALEPS 145 (351)
T ss_dssp TSSCSEEEEEEECCCSS----C-EEEEEECCGGGCSEEEEEETTCEEEEEECSSTT
T ss_pred ccccCcceeeeecccCC----c-eeEEEEcCCCCCcEEEEecCCCcEEEecCCChH
Confidence 011221111111111 0 001233456 8888888754 7789987654
No 136
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=95.77 E-value=1 Score=43.96 Aligned_cols=222 Identities=17% Similarity=0.171 Sum_probs=109.0
Q ss_pred eecCCCcEEEecCCCCCCCeEEEEeCCCCccceeeccccccccc-ccceeEEccCCcEEEEcCccCCeEEEE-ecCCCcc
Q 039705 107 GLSANGTIVISGGWSSRGRSVRYLSGCYHACYWKEHHWELSAKR-WFSTQHILPDGSFIVVGGRREFSYEYI-LKEGKRI 184 (539)
Q Consensus 107 ~~l~dG~l~v~GG~~~g~~~v~~ydP~~~t~~W~~~~~~m~~~R-~y~s~~~L~dG~VyvvGG~~~~~~E~y-P~~~~~~ 184 (539)
.+.+||+.+++|+.+ ..+++||.. +.+-.. . +.... .-.+.+.-++++.++.|+.+. ++.+| .+.. .
T Consensus 72 ~~s~dg~~l~s~s~D---~~v~~wd~~--~~~~~~--~-~~~h~~~v~~~~~~~~~~~l~s~s~D~-~i~vwd~~~~--~ 140 (319)
T 3frx_A 72 TLTADGAYALSASWD---KTLRLWDVA--TGETYQ--R-FVGHKSDVMSVDIDKKASMIISGSRDK-TIKVWTIKGQ--C 140 (319)
T ss_dssp EECTTSSEEEEEETT---SEEEEEETT--TTEEEE--E-EECCSSCEEEEEECTTSCEEEEEETTS-CEEEEETTSC--E
T ss_pred EECCCCCEEEEEeCC---CEEEEEECC--CCCeeE--E-EccCCCcEEEEEEcCCCCEEEEEeCCC-eEEEEECCCC--e
Confidence 456799999999863 689999987 443211 1 22111 112344456888888888764 45666 3221 1
Q ss_pred eeeccCccccCCCCCCCCcceEEEee------CCcEEEEEcC--ceeEeeCCCCeEEEEcccCCCCCCccCCCccEEecc
Q 039705 185 IYDLPILNETTNPSENNLYPFVFLST------DGNLFIFAND--RSILLNPETNEILHVFPILRGGSRNYPASATSALLP 256 (539)
Q Consensus 185 w~~~~~l~~~~~~~~~~~yp~~~~~~------~G~Iyv~Gg~--~~e~yDp~tn~W~~~~p~mp~~~r~yp~~g~av~lp 256 (539)
-... ....+ . -......+ ++.+++.|+. .+.+||..+.+-...+ .+ .. +....+.
T Consensus 141 ~~~~---~~h~~----~-v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~---~~-h~-----~~v~~~~ 203 (319)
T 3frx_A 141 LATL---LGHND----W-VSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADF---IG-HN-----SNINTLT 203 (319)
T ss_dssp EEEE---CCCSS----C-EEEEEECCC------CCEEEEEETTSCEEEEETTTTEEEEEE---CC-CC-----SCEEEEE
T ss_pred EEEE---eccCC----c-EEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchhheee---cC-CC-----CcEEEEE
Confidence 1111 01000 0 00111222 4556777764 4778999887644222 22 11 1111111
Q ss_pred cccCCCCCCCcccEEEEecCCCCCcccccCCCcccccCCceEEEEeeCCCCceeeeccCCCceeceeEEecCCcEEEEcC
Q 039705 257 IKLQDPNSNAIRAEVLICGGAKPEAGVLAGKGEFMNALQDCGRIEITNKSATWQREMMPSPRVMGEMLLLPTGDVLIING 336 (539)
Q Consensus 257 l~~~~~~~~~~~g~Iyv~GG~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~~M~~~R~~~~~vvlpdG~I~vvGG 336 (539)
.. .+++.++.|+.+. .+..+|+.......+. ... ... ......|||+.++.+.
T Consensus 204 ~s--------p~g~~l~s~~~dg----------------~i~iwd~~~~~~~~~~-~~~-~~v-~~~~~sp~~~~la~~~ 256 (319)
T 3frx_A 204 AS--------PDGTLIASAGKDG----------------EIMLWNLAAKKAMYTL-SAQ-DEV-FSLAFSPNRYWLAAAT 256 (319)
T ss_dssp EC--------TTSSEEEEEETTC----------------EEEEEETTTTEEEEEE-ECC-SCE-EEEEECSSSSEEEEEE
T ss_pred Ec--------CCCCEEEEEeCCC----------------eEEEEECCCCcEEEEe-cCC-CcE-EEEEEcCCCCEEEEEc
Confidence 11 1678888888652 3455665421111111 111 122 2345678999888765
Q ss_pred cCCCCCCcccCCCCCCccEEEcCCCCCCCceEecCCCCC----Cccce-eeEeeCCCCeEEEecCCCC
Q 039705 337 AKKGTAGWNFATDPNTTPVLYEPDDPINERFSELTPTSK----PRMCH-STSVVLPDGKILVAGSNPH 399 (539)
Q Consensus 337 ~~~g~~g~~~~~~~~~~~e~YdP~t~~g~~Wt~~a~~~~----~R~yh-s~a~llpdG~V~v~GG~~~ 399 (539)
.+ .+.+|+.+.. ..+..+.+... ....+ .....-|||+.+++|+.+.
T Consensus 257 ~~--------------~i~v~~~~~~--~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~sg~~Dg 308 (319)
T 3frx_A 257 AT--------------GIKVFSLDPQ--YLVDDLRPEFAGYSKAAEPHAVSLAWSADGQTLFAGYTDN 308 (319)
T ss_dssp TT--------------EEEEEEETTE--EEEEEECCCCTTCCGGGCCCEEEEEECTTSSEEEEEETTS
T ss_pred CC--------------CcEEEEeCcC--eeeeccCccccccccCcCcceeEEEECCCCCEEEEeecCc
Confidence 32 2456665543 01222221100 00111 1244679999999998643
No 137
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=95.74 E-value=1.4 Score=41.83 Aligned_cols=101 Identities=12% Similarity=0.033 Sum_probs=53.9
Q ss_pred CCCcEEEecCCCCCCCeEEEEeCCCCccceeeccccccc-ccccceeEEccCCcEEEEcCccCCeEEEEecCCCcceeec
Q 039705 110 ANGTIVISGGWSSRGRSVRYLSGCYHACYWKEHHWELSA-KRWFSTQHILPDGSFIVVGGRREFSYEYILKEGKRIIYDL 188 (539)
Q Consensus 110 ~dG~l~v~GG~~~g~~~v~~ydP~~~t~~W~~~~~~m~~-~R~y~s~~~L~dG~VyvvGG~~~~~~E~yP~~~~~~w~~~ 188 (539)
+++..+++|+.+ ..+++||.. +..-... +.. ...-.+.+..+|++.+++|+.++ .+.+|...+.......
T Consensus 27 ~~~~~l~s~~~d---g~v~vw~~~--~~~~~~~---~~~~~~~v~~~~~~~~~~~l~~~~~dg-~i~~~~~~~~~~~~~~ 97 (313)
T 3odt_A 27 VDDSKVASVSRD---GTVRLWSKD--DQWLGTV---VYTGQGFLNSVCYDSEKELLLFGGKDT-MINGVPLFATSGEDPL 97 (313)
T ss_dssp EETTEEEEEETT---SEEEEEEES--SSEEEEE---EEECSSCEEEEEEETTTTEEEEEETTS-CEEEEETTCCTTSCC-
T ss_pred cCCCEEEEEEcC---CcEEEEECC--CCEEEEE---eecCCccEEEEEECCCCCEEEEecCCC-eEEEEEeeecCCCCcc
Confidence 788888888753 578999986 4432221 111 22223455567899999998764 3444421110011111
Q ss_pred cCccccCCCCCCCCcceEEEeeCCcEEEEEcCc--eeEee
Q 039705 189 PILNETTNPSENNLYPFVFLSTDGNLFIFANDR--SILLN 226 (539)
Q Consensus 189 ~~l~~~~~~~~~~~yp~~~~~~~G~Iyv~Gg~~--~e~yD 226 (539)
..+.... .+...+..++++++.|+.+ +.+||
T Consensus 98 ~~~~~~~-------~~i~~~~~~~~~l~~~~~d~~i~~~d 130 (313)
T 3odt_A 98 YTLIGHQ-------GNVCSLSFQDGVVISGSWDKTAKVWK 130 (313)
T ss_dssp CEECCCS-------SCEEEEEEETTEEEEEETTSEEEEEE
T ss_pred cchhhcc-------cCEEEEEecCCEEEEEeCCCCEEEEc
Confidence 1111110 1223444588888888754 67788
No 138
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=95.70 E-value=0.18 Score=50.69 Aligned_cols=140 Identities=14% Similarity=0.139 Sum_probs=69.7
Q ss_pred EeeCCcEEEEEcC--ceeEeeCCCCeEEEEcccCCCCCCccCCCccEEecccccCCCCCCCcccEEEEecCCCCCccccc
Q 039705 208 LSTDGNLFIFAND--RSILLNPETNEILHVFPILRGGSRNYPASATSALLPIKLQDPNSNAIRAEVLICGGAKPEAGVLA 285 (539)
Q Consensus 208 ~~~~G~Iyv~Gg~--~~e~yDp~tn~W~~~~p~mp~~~r~yp~~g~av~lpl~~~~~~~~~~~g~Iyv~GG~~~~~~~~~ 285 (539)
..++|+.++.|+. .+.+||..+++-.+.+ .+ .... --.....| .+..+++.|+.+.
T Consensus 135 ~spdg~~l~sgs~d~~i~iwd~~~~~~~~~~---~~-h~~~--V~~~~~~~----------~~~~~l~s~s~D~------ 192 (344)
T 4gqb_B 135 VLSSGTQAVSGSKDICIKVWDLAQQVVLSSY---RA-HAAQ--VTCVAASP----------HKDSVFLSCSEDN------ 192 (344)
T ss_dssp ECTTSSEEEEEETTSCEEEEETTTTEEEEEE---CC-CSSC--EEEEEECS----------SCTTEEEEEETTS------
T ss_pred ECCCCCEEEEEeCCCeEEEEECCCCcEEEEE---cC-cCCc--eEEEEecC----------CCCCceeeecccc------
Confidence 3579999999875 4789999988754322 22 1110 00111111 1345778877651
Q ss_pred CCCcccccCCceEEEEeeCCCCceeee-ccCCCceeceeEEec-CCcEEEEcCcCCCCCCcccCCCCCCccEEEcCCCCC
Q 039705 286 GKGEFMNALQDCGRIEITNKSATWQRE-MMPSPRVMGEMLLLP-TGDVLIINGAKKGTAGWNFATDPNTTPVLYEPDDPI 363 (539)
Q Consensus 286 ~~~~~~~a~~s~~~~d~~~~~~~W~~~-~M~~~R~~~~~vvlp-dG~I~vvGG~~~g~~g~~~~~~~~~~~e~YdP~t~~ 363 (539)
++..+|+......-+.. ........ +....| ++++++.|+.+ + ++.+||.++..
T Consensus 193 ----------~v~iwd~~~~~~~~~~~~~~~~~~~~-~~~~~p~~~~~l~sg~~d-g------------~v~~wd~~~~~ 248 (344)
T 4gqb_B 193 ----------RILLWDTRCPKPASQIGCSAPGYLPT-SLAWHPQQSEVFVFGDEN-G------------TVSLVDTKSTS 248 (344)
T ss_dssp ----------CEEEEETTSSSCEEECC----CCCEE-EEEECSSCTTEEEEEETT-S------------EEEEEESCC--
T ss_pred ----------ccccccccccceeeeeecceeeccce-eeeecCCCCcceEEeccC-C------------cEEEEECCCCc
Confidence 35567764311111111 11111111 222334 67788888765 2 57899988761
Q ss_pred CCceEecCCCCCCccceeeEeeCCCC-eEEEecCCC
Q 039705 364 NERFSELTPTSKPRMCHSTSVVLPDG-KILVAGSNP 398 (539)
Q Consensus 364 g~~Wt~~a~~~~~R~yhs~a~llpdG-~V~v~GG~~ 398 (539)
.-..+.... ..-....+.||| +++++|+.+
T Consensus 249 --~~~~~~~h~---~~v~~v~fsp~g~~~lasgs~D 279 (344)
T 4gqb_B 249 --CVLSSAVHS---QCVTGLVFSPHSVPFLASLSED 279 (344)
T ss_dssp --CCEEEECCS---SCEEEEEECSSSSCCEEEEETT
T ss_pred --EEEEEcCCC---CCEEEEEEccCCCeEEEEEeCC
Confidence 112221110 111223456888 578888864
No 139
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=95.67 E-value=0.41 Score=46.82 Aligned_cols=103 Identities=6% Similarity=0.032 Sum_probs=56.5
Q ss_pred CcEEEecCCCCCCCeEEEEeCCCCccceeecccccc-cccccceeEEcc-CCcEEEEcCccCCeEEEE-ecCCCccee-e
Q 039705 112 GTIVISGGWSSRGRSVRYLSGCYHACYWKEHHWELS-AKRWFSTQHILP-DGSFIVVGGRREFSYEYI-LKEGKRIIY-D 187 (539)
Q Consensus 112 G~l~v~GG~~~g~~~v~~ydP~~~t~~W~~~~~~m~-~~R~y~s~~~L~-dG~VyvvGG~~~~~~E~y-P~~~~~~w~-~ 187 (539)
|+++++|+.. ..+.+||.. +.+-. .. +. ....-.+.+..+ +++++++|+.++ .+.+| ..+. +.. .
T Consensus 85 ~~~l~~~~~d---g~i~v~d~~--~~~~~--~~-~~~~~~~i~~~~~~~~~~~~l~s~~~dg-~i~iwd~~~~--~~~~~ 153 (366)
T 3k26_A 85 HPLLAVAGSR---GIIRIINPI--TMQCI--KH-YVGHGNAINELKFHPRDPNLLLSVSKDH-ALRLWNIQTD--TLVAI 153 (366)
T ss_dssp CEEEEEEETT---CEEEEECTT--TCCEE--EE-EESCCSCEEEEEECSSCTTEEEEEETTS-CEEEEETTTT--EEEEE
T ss_pred CCEEEEecCC---CEEEEEEch--hceEe--ee-ecCCCCcEEEEEECCCCCCEEEEEeCCC-eEEEEEeecC--eEEEE
Confidence 7889998863 579999987 43321 11 22 111122334455 788999888764 46667 4433 221 1
Q ss_pred ccCccccCCCCCCCCcce-EEEeeCCcEEEEEcC--ceeEeeCCCCe
Q 039705 188 LPILNETTNPSENNLYPF-VFLSTDGNLFIFAND--RSILLNPETNE 231 (539)
Q Consensus 188 ~~~l~~~~~~~~~~~yp~-~~~~~~G~Iyv~Gg~--~~e~yDp~tn~ 231 (539)
...+..... ... +...++|+.++.|+. .+.+||..+.+
T Consensus 154 ~~~~~~~~~------~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~ 194 (366)
T 3k26_A 154 FGGVEGHRD------EVLSADYDLLGEKIMSCGMDHSLKLWRINSKR 194 (366)
T ss_dssp ECSTTSCSS------CEEEEEECTTSSEEEEEETTSCEEEEESCSHH
T ss_pred ecccccccC------ceeEEEECCCCCEEEEecCCCCEEEEECCCCc
Confidence 111111110 111 223368888888875 47889988754
No 140
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=95.66 E-value=0.53 Score=45.77 Aligned_cols=64 Identities=13% Similarity=0.002 Sum_probs=38.0
Q ss_pred cCCCcEEEecCCCCCCCeEEEEeCCCCccceeeccccccccc--ccceeEEccCCc-EEEEcCccCCeEEEE-ecCC
Q 039705 109 SANGTIVISGGWSSRGRSVRYLSGCYHACYWKEHHWELSAKR--WFSTQHILPDGS-FIVVGGRREFSYEYI-LKEG 181 (539)
Q Consensus 109 l~dG~l~v~GG~~~g~~~v~~ydP~~~t~~W~~~~~~m~~~R--~y~s~~~L~dG~-VyvvGG~~~~~~E~y-P~~~ 181 (539)
..++++|++++. ...+.++|+. +.+.... +..+. .-...+.-+||+ +|+.+. ....+.+| +.+.
T Consensus 8 ~~~~~~~v~~~~---~~~v~~~d~~--~~~~~~~---~~~~~~~~~~~~~~s~dg~~~~v~~~-~~~~i~~~d~~t~ 75 (349)
T 1jmx_B 8 KAGHEYMIVTNY---PNNLHVVDVA--SDTVYKS---CVMPDKFGPGTAMMAPDNRTAYVLNN-HYGDIYGIDLDTC 75 (349)
T ss_dssp CTTCEEEEEEET---TTEEEEEETT--TTEEEEE---EECSSCCSSCEEEECTTSSEEEEEET-TTTEEEEEETTTT
T ss_pred cCCCEEEEEeCC---CCeEEEEECC--CCcEEEE---EecCCCCCCceeEECCCCCEEEEEeC-CCCcEEEEeCCCC
Confidence 457888888765 3689999998 6554322 22222 223455667887 555553 33456677 5443
No 141
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=95.66 E-value=0.7 Score=44.88 Aligned_cols=189 Identities=11% Similarity=0.079 Sum_probs=102.3
Q ss_pred EccCCcEEEEcCccC-CeEEEE-ecCCCccee-eccCccccCCCCCCCCcceEEEeeCCcEEEEEc--CceeEeeCCCCe
Q 039705 157 ILPDGSFIVVGGRRE-FSYEYI-LKEGKRIIY-DLPILNETTNPSENNLYPFVFLSTDGNLFIFAN--DRSILLNPETNE 231 (539)
Q Consensus 157 ~L~dG~VyvvGG~~~-~~~E~y-P~~~~~~w~-~~~~l~~~~~~~~~~~yp~~~~~~~G~Iyv~Gg--~~~e~yDp~tn~ 231 (539)
...|+.+|+..|..+ ..+..+ +++. +-. ..++ .. ..|.......+++||+... +.+.+||+++.+
T Consensus 49 ~~~~~~LyestG~~g~S~v~~vD~~Tg--kv~~~~~l-~~-------~~FgeGit~~g~~ly~ltw~~~~v~v~D~~t~~ 118 (262)
T 3nol_A 49 FYRNGYFYESTGLNGRSSIRKVDIESG--KTLQQIEL-GK-------RYFGEGISDWKDKIVGLTWKNGLGFVWNIRNLR 118 (262)
T ss_dssp EEETTEEEEEEEETTEEEEEEECTTTC--CEEEEEEC-CT-------TCCEEEEEEETTEEEEEESSSSEEEEEETTTCC
T ss_pred EEECCEEEEECCCCCCceEEEEECCCC--cEEEEEec-CC-------ccceeEEEEeCCEEEEEEeeCCEEEEEECccCc
Confidence 344899999999765 456777 7765 332 2222 11 2343445666889999974 468899999988
Q ss_pred EEEEcccCCCCCCccCCCccEEecccccCCCCCCCcccEEEEecCCCCCcccccCCCcccccCCceEEEEeeCCCCceee
Q 039705 232 ILHVFPILRGGSRNYPASATSALLPIKLQDPNSNAIRAEVLICGGAKPEAGVLAGKGEFMNALQDCGRIEITNKSATWQR 311 (539)
Q Consensus 232 W~~~~p~mp~~~r~yp~~g~av~lpl~~~~~~~~~~~g~Iyv~GG~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~ 311 (539)
....++- +. .|-+... .+.++|+.-|. +.+..+||.. .+-..
T Consensus 119 ~~~ti~~-~~-------eG~glt~-----------dg~~L~~SdGs-----------------~~i~~iDp~T--~~v~~ 160 (262)
T 3nol_A 119 QVRSFNY-DG-------EGWGLTH-----------NDQYLIMSDGT-----------------PVLRFLDPES--LTPVR 160 (262)
T ss_dssp EEEEEEC-SS-------CCCCEEE-----------CSSCEEECCSS-----------------SEEEEECTTT--CSEEE
T ss_pred EEEEEEC-CC-------CceEEec-----------CCCEEEEECCC-----------------CeEEEEcCCC--CeEEE
Confidence 7655532 11 2333221 14566666442 2345566542 22111
Q ss_pred -ecc---CCCceeceeEEecCCcEEEEcCcCCCCCCcccCCCCCCccEEEcCCCCCCCceEecCCCCC--------Cccc
Q 039705 312 -EMM---PSPRVMGEMLLLPTGDVLIINGAKKGTAGWNFATDPNTTPVLYEPDDPINERFSELTPTSK--------PRMC 379 (539)
Q Consensus 312 -~~M---~~~R~~~~~vvlpdG~I~vvGG~~~g~~g~~~~~~~~~~~e~YdP~t~~g~~Wt~~a~~~~--------~R~y 379 (539)
.+. ..+-...+-....||+||+.. ... .++.+-||++.+=..|-.++.+.. .-.-
T Consensus 161 ~I~V~~~g~~~~~lNELe~~~G~lyan~-w~~------------~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vl 227 (262)
T 3nol_A 161 TITVTAHGEELPELNELEWVDGEIFANV-WQT------------NKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVL 227 (262)
T ss_dssp EEECEETTEECCCEEEEEEETTEEEEEE-TTS------------SEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCE
T ss_pred EEEeccCCccccccceeEEECCEEEEEE-ccC------------CeEEEEECCCCcEEEEEECCcCccccccccCcCCce
Confidence 111 111111122334499999733 221 168899999983333444443321 1123
Q ss_pred eeeEeeCCCCeEEEecCCCCCCCccCCCCCCCcceeeEE
Q 039705 380 HSTSVVLPDGKILVAGSNPHSRYNLTSGSKYPTELRIEK 418 (539)
Q Consensus 380 hs~a~llpdG~V~v~GG~~~~~~~~~~~~~~p~~~~vE~ 418 (539)
.+.|.--...++||+|-+ +|..++|++
T Consensus 228 NGIA~dp~~~~lfVTGK~------------Wp~~~ev~~ 254 (262)
T 3nol_A 228 NGIAWDKEHHRLFVTGKL------------WPKVFEITL 254 (262)
T ss_dssp EEEEEETTTTEEEEEETT------------CSEEEEEEE
T ss_pred EEEEEcCCCCEEEEECCC------------CCceEEEEE
Confidence 566654335788998874 344667765
No 142
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=95.66 E-value=1.8 Score=42.16 Aligned_cols=111 Identities=9% Similarity=0.004 Sum_probs=60.6
Q ss_pred eecCCCcEEEecCCCCCCCeEEEEeCCCCccceeecccccccccccceeEEccCCcEEEEcCcc---CCeEEEE-ecCCC
Q 039705 107 GLSANGTIVISGGWSSRGRSVRYLSGCYHACYWKEHHWELSAKRWFSTQHILPDGSFIVVGGRR---EFSYEYI-LKEGK 182 (539)
Q Consensus 107 ~~l~dG~l~v~GG~~~g~~~v~~ydP~~~t~~W~~~~~~m~~~R~y~s~~~L~dG~VyvvGG~~---~~~~E~y-P~~~~ 182 (539)
+...+|+|++++.. ...+.+||+. +.++..... . ....-.+.+.-+||++|+....+ ...+-+| +.+.
T Consensus 51 ~~~~~g~l~~~~~~---~~~i~~~d~~--~~~~~~~~~-~-~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~- 122 (333)
T 2dg1_A 51 NFDRQGQLFLLDVF---EGNIFKINPE--TKEIKRPFV-S-HKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGD- 122 (333)
T ss_dssp EECTTSCEEEEETT---TCEEEEECTT--TCCEEEEEE-C-SSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSC-
T ss_pred EECCCCCEEEEECC---CCEEEEEeCC--CCcEEEEee-C-CCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCC-
Confidence 44578999988754 2578999998 666654321 1 11111233444689998875432 1245556 4443
Q ss_pred ccee-eccCccccCCCCCCCCcceE-EEeeCCcEEEEEcC--------ceeEeeCCCCeEE
Q 039705 183 RIIY-DLPILNETTNPSENNLYPFV-FLSTDGNLFIFAND--------RSILLNPETNEIL 233 (539)
Q Consensus 183 ~~w~-~~~~l~~~~~~~~~~~yp~~-~~~~~G~Iyv~Gg~--------~~e~yDp~tn~W~ 233 (539)
... ....... ...+.. ...++|++|+.... ...+||+.+++..
T Consensus 123 -~~~~~~~~~~~-------~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~ 175 (333)
T 2dg1_A 123 -NLQDIIEDLST-------AYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVT 175 (333)
T ss_dssp -SCEEEECSSSS-------CCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEE
T ss_pred -EEEEEEccCcc-------CCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEE
Confidence 221 1110000 112333 34468999987642 3677888876655
No 143
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=95.48 E-value=1.9 Score=41.43 Aligned_cols=135 Identities=12% Similarity=0.054 Sum_probs=67.6
Q ss_pred EEEEECCCCCEEeCccCCCc--ccccceecCCCc-EEEecCCCCCCCeEEEEeCCCCccceeeccccccc----ccccce
Q 039705 82 AVEYDAESAAIRPLKILTDT--WSSSGGLSANGT-IVISGGWSSRGRSVRYLSGCYHACYWKEHHWELSA----KRWFST 154 (539)
Q Consensus 82 ~~~yDp~t~~w~~l~~~~~~--~c~~~~~l~dG~-l~v~GG~~~g~~~v~~ydP~~~t~~W~~~~~~m~~----~R~y~s 154 (539)
..+||+.+.+....-..... .....++.+||+ +|+.+.. ...+.+||.. +.+-...-. +.. ...-..
T Consensus 13 v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~---~~~v~~~d~~--~~~~~~~~~-~~~~~~~~~~~~~ 86 (337)
T 1pby_B 13 LVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNK---SESLVKIDLV--TGETLGRID-LSTPEERVKSLFG 86 (337)
T ss_dssp EEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETT---TTEEEEEETT--TCCEEEEEE-CCBTTEEEECTTC
T ss_pred EEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCC---CCeEEEEECC--CCCeEeeEE-cCCcccccccccc
Confidence 55677776655432221111 123345567885 5565543 3579999987 544322111 111 012234
Q ss_pred eEEccCCcEEEEcCc-----------cCCeEEEE-ecCCCccee-eccCccccCCCCCCCCcc-eEEEeeCCcEEEEEcC
Q 039705 155 QHILPDGSFIVVGGR-----------REFSYEYI-LKEGKRIIY-DLPILNETTNPSENNLYP-FVFLSTDGNLFIFAND 220 (539)
Q Consensus 155 ~~~L~dG~VyvvGG~-----------~~~~~E~y-P~~~~~~w~-~~~~l~~~~~~~~~~~yp-~~~~~~~G~Iyv~Gg~ 220 (539)
.+.-+||+.++++.. ....+.+| ..+. +.. ..+.- . .+ .....+||+.+++++.
T Consensus 87 ~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~--~~~~~~~~~-~---------~~~~~~~s~dg~~l~~~~~ 154 (337)
T 1pby_B 87 AALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETL--SRRKAFEAP-R---------QITMLAWARDGSKLYGLGR 154 (337)
T ss_dssp EEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTT--EEEEEEECC-S---------SCCCEEECTTSSCEEEESS
T ss_pred eEECCCCCEEEEEecccccccccccccCceEEEEECCCC--cEEEEEeCC-C---------CcceeEECCCCCEEEEeCC
Confidence 455568854444421 12456666 4433 221 11110 0 11 1345578884445577
Q ss_pred ceeEeeCCCCeEEE
Q 039705 221 RSILLNPETNEILH 234 (539)
Q Consensus 221 ~~e~yDp~tn~W~~ 234 (539)
.+.+||..+++...
T Consensus 155 ~i~~~d~~~~~~~~ 168 (337)
T 1pby_B 155 DLHVMDPEAGTLVE 168 (337)
T ss_dssp SEEEEETTTTEEEE
T ss_pred eEEEEECCCCcEee
Confidence 88999999887653
No 144
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=95.41 E-value=0.69 Score=45.09 Aligned_cols=186 Identities=9% Similarity=-0.021 Sum_probs=98.4
Q ss_pred ceeEEccCCcEEEEcCcc-CCeEEEE-ecCCCccee-eccCccccCCCCCCCCcceEEEeeCCcEEEEEc--CceeEeeC
Q 039705 153 STQHILPDGSFIVVGGRR-EFSYEYI-LKEGKRIIY-DLPILNETTNPSENNLYPFVFLSTDGNLFIFAN--DRSILLNP 227 (539)
Q Consensus 153 ~s~~~L~dG~VyvvGG~~-~~~~E~y-P~~~~~~w~-~~~~l~~~~~~~~~~~yp~~~~~~~G~Iyv~Gg--~~~e~yDp 227 (539)
++.+.-+||++|+..|.. ..++.++ ++++ +-. ..+. . ...++..+...+++||+..- +.+.+||+
T Consensus 24 ~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg--~v~~~i~l-~-------~~~fgeGi~~~g~~lyv~t~~~~~v~viD~ 93 (266)
T 2iwa_A 24 QGLVYAENDTLFESTGLYGRSSVRQVALQTG--KVENIHKM-D-------DSYFGEGLTLLNEKLYQVVWLKNIGFIYDR 93 (266)
T ss_dssp EEEEECSTTEEEEEECSTTTCEEEEEETTTC--CEEEEEEC-C-------TTCCEEEEEEETTEEEEEETTCSEEEEEET
T ss_pred ccEEEeCCCeEEEECCCCCCCEEEEEECCCC--CEEEEEec-C-------CCcceEEEEEeCCEEEEEEecCCEEEEEEC
Confidence 344445569999998753 4567777 7665 332 2221 1 12344555666779999874 46889999
Q ss_pred CCCeEEEEcccCCCCCCccCCCccEEecccccCCCCCCCcccEEEEecCCCCCcccccCCCcccccCCceEEEEeeCCCC
Q 039705 228 ETNEILHVFPILRGGSRNYPASATSALLPIKLQDPNSNAIRAEVLICGGAKPEAGVLAGKGEFMNALQDCGRIEITNKSA 307 (539)
Q Consensus 228 ~tn~W~~~~p~mp~~~r~yp~~g~av~lpl~~~~~~~~~~~g~Iyv~GG~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~ 307 (539)
.+.+....++. +. + .|.++ .+ .+.++|++-|. +.+..+|+.. .
T Consensus 94 ~t~~v~~~i~~-g~-~-----~g~gl-t~----------Dg~~l~vs~gs-----------------~~l~viD~~t--~ 136 (266)
T 2iwa_A 94 RTLSNIKNFTH-QM-K-----DGWGL-AT----------DGKILYGSDGT-----------------SILYEIDPHT--F 136 (266)
T ss_dssp TTTEEEEEEEC-CS-S-----SCCEE-EE----------CSSSEEEECSS-----------------SEEEEECTTT--C
T ss_pred CCCcEEEEEEC-CC-C-----CeEEE-EE----------CCCEEEEECCC-----------------CeEEEEECCC--C
Confidence 99876644432 11 1 13332 11 25678877542 2355666531 1
Q ss_pred ceee-ec---cCCCceeceeEEecCCcEEEEcCcCCCCCCcccCCCCCCccEEEcCCCCCCCceEecCCCC-------CC
Q 039705 308 TWQR-EM---MPSPRVMGEMLLLPTGDVLIINGAKKGTAGWNFATDPNTTPVLYEPDDPINERFSELTPTS-------KP 376 (539)
Q Consensus 308 ~W~~-~~---M~~~R~~~~~vvlpdG~I~vvGG~~~g~~g~~~~~~~~~~~e~YdP~t~~g~~Wt~~a~~~-------~~ 376 (539)
+-.. .+ .+.+-...+.+...||+||+..... .++.+-||++..=..|-.++.+. .+
T Consensus 137 ~v~~~I~Vg~~~~p~~~~nele~~dg~lyvn~~~~-------------~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~ 203 (266)
T 2iwa_A 137 KLIKKHNVKYNGHRVIRLNELEYINGEVWANIWQT-------------DCIARISAKDGTLLGWILLPNLRKKLIDEGFR 203 (266)
T ss_dssp CEEEEEECEETTEECCCEEEEEEETTEEEEEETTS-------------SEEEEEETTTCCEEEEEECHHHHHHHHHTTCT
T ss_pred cEEEEEEECCCCcccccceeEEEECCEEEEecCCC-------------CeEEEEECCCCcEEEEEECCCccccccccccc
Confidence 1111 11 1111111223334499999865432 16889999998322333332110 00
Q ss_pred --ccceeeEeeCCCC-eEEEecCCCC
Q 039705 377 --RMCHSTSVVLPDG-KILVAGSNPH 399 (539)
Q Consensus 377 --R~yhs~a~llpdG-~V~v~GG~~~ 399 (539)
-.-++.|. .||| ++||+|.+..
T Consensus 204 ~~~v~nGIa~-~~~~~~lfVTgk~~~ 228 (266)
T 2iwa_A 204 DIDVLNGIAW-DQENKRIFVTGKLWP 228 (266)
T ss_dssp TCCCEEEEEE-ETTTTEEEEEETTCS
T ss_pred ccCceEEEEE-cCCCCEEEEECCCCC
Confidence 12245554 4664 7999998644
No 145
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=95.40 E-value=1.8 Score=42.52 Aligned_cols=68 Identities=10% Similarity=0.106 Sum_probs=38.2
Q ss_pred eEEcc--CCcEEEEcCccCCeEEEE-ecCCCcceeeccCccccCCCCCCCCcceEEEeeCCcEEEEEcC--ceeEeeCCC
Q 039705 155 QHILP--DGSFIVVGGRREFSYEYI-LKEGKRIIYDLPILNETTNPSENNLYPFVFLSTDGNLFIFAND--RSILLNPET 229 (539)
Q Consensus 155 ~~~L~--dG~VyvvGG~~~~~~E~y-P~~~~~~w~~~~~l~~~~~~~~~~~yp~~~~~~~G~Iyv~Gg~--~~e~yDp~t 229 (539)
.+.-+ +|+.++.|+.++ ++.+| ..+. +.... ...... ...-.+...++|++++.|+. .+.+||.++
T Consensus 131 ~~~~~~~~~~~l~s~s~dg-~i~~wd~~~~--~~~~~--~~~~~~----~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~ 201 (343)
T 3lrv_A 131 MYGHNEVNTEYFIWADNRG-TIGFQSYEDD--SQYIV--HSAKSD----VEYSSGVLHKDSLLLALYSPDGILDVYNLSS 201 (343)
T ss_dssp EECCC---CCEEEEEETTC-CEEEEESSSS--CEEEE--ECCCSS----CCCCEEEECTTSCEEEEECTTSCEEEEESSC
T ss_pred EEcCCCCCCCEEEEEeCCC-cEEEEECCCC--cEEEE--EecCCC----CceEEEEECCCCCEEEEEcCCCEEEEEECCC
Confidence 34445 788888888664 56677 4433 22111 000000 01113344579999999875 478899988
Q ss_pred Ce
Q 039705 230 NE 231 (539)
Q Consensus 230 n~ 231 (539)
.+
T Consensus 202 ~~ 203 (343)
T 3lrv_A 202 PD 203 (343)
T ss_dssp TT
T ss_pred CC
Confidence 75
No 146
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=95.39 E-value=2.3 Score=41.78 Aligned_cols=240 Identities=13% Similarity=0.148 Sum_probs=117.1
Q ss_pred eecCCCcEEEecCCCCC---------------------CCeEEEEeCCCCccceeeccc--ccccccccceeEEccCCcE
Q 039705 107 GLSANGTIVISGGWSSR---------------------GRSVRYLSGCYHACYWKEHHW--ELSAKRWFSTQHILPDGSF 163 (539)
Q Consensus 107 ~~l~dG~l~v~GG~~~g---------------------~~~v~~ydP~~~t~~W~~~~~--~m~~~R~y~s~~~L~dG~V 163 (539)
++.++|++|+++..... ...+.++|+. +.+...... .+..+ ...++-++|++
T Consensus 30 a~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~--~g~~~~~~~~~~~~~p---~gia~d~~g~l 104 (329)
T 3fvz_A 30 ALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPN--NAEILQSSGKNLFYLP---HGLSIDTDGNY 104 (329)
T ss_dssp EECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTT--TCCEEEEECTTTCSSE---EEEEECTTSCE
T ss_pred EECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECC--CCeEEeccCCCccCCc---eEEEECCCCCE
Confidence 44567888887653210 1368899997 554432111 12222 23445568999
Q ss_pred EEEcCccCCeEEEE-ecCCCcce-eec-cCccccCCCCCCCCcceEEEe-e-CCcEEEEEc---CceeEeeCCCCeEEEE
Q 039705 164 IVVGGRREFSYEYI-LKEGKRII-YDL-PILNETTNPSENNLYPFVFLS-T-DGNLFIFAN---DRSILLNPETNEILHV 235 (539)
Q Consensus 164 yvvGG~~~~~~E~y-P~~~~~~w-~~~-~~l~~~~~~~~~~~yp~~~~~-~-~G~Iyv~Gg---~~~e~yDp~tn~W~~~ 235 (539)
||....+ ..+..| +... ... ... ........ ...-.+|..+++ + +|+||+..+ ..+.+||+...... .
T Consensus 105 ~v~d~~~-~~v~~~~~~g~-~~~~~~~~~~~~~g~~-~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~~~g~~~~-~ 180 (329)
T 3fvz_A 105 WVTDVAL-HQVFKLDPHSK-EGPLLILGRSMQPGSD-QNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFSPSGKFVT-Q 180 (329)
T ss_dssp EEEETTT-TEEEEECTTCS-SCCSEEESBTTBCCCS-TTCCSSEEEEEECTTTCCEEEEECSSCCEEEEECTTSCEEE-E
T ss_pred EEEECCC-CEEEEEeCCCC-eEEEEEecccCCCCCC-ccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEcCCCCEEE-E
Confidence 9876543 345666 4321 001 111 00000000 011225665555 5 799999984 35788996654433 3
Q ss_pred cccCCC------CCCccCCCccEEecccccCCCCCCCcccEEEEecCCCCCcccccCCCcccccCCceEEEEeeCCCCce
Q 039705 236 FPILRG------GSRNYPASATSALLPIKLQDPNSNAIRAEVLICGGAKPEAGVLAGKGEFMNALQDCGRIEITNKSATW 309 (539)
Q Consensus 236 ~p~mp~------~~r~yp~~g~av~lpl~~~~~~~~~~~g~Iyv~GG~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W 309 (539)
+..-.. +...+| .+.+ +-| ..++|||+...+ ..+.+||+. +.+.
T Consensus 181 ~~~~g~~~~~~~~~~~~p-~gia-~d~----------~~g~l~v~d~~~----------------~~I~~~~~~--~G~~ 230 (329)
T 3fvz_A 181 WGEESSGSSPRPGQFSVP-HSLA-LVP----------HLDQLCVADREN----------------GRIQCFKTD--TKEF 230 (329)
T ss_dssp ECEECCSSSCCTTEESCE-EEEE-EET----------TTTEEEEEETTT----------------TEEEEEETT--TCCE
T ss_pred eccCCCCCCCCCcccCCC-cEEE-EEC----------CCCEEEEEECCC----------------CEEEEEECC--CCcE
Confidence 321110 011122 1222 111 138999986533 246778764 2333
Q ss_pred eee-cc--CCCceeceeEEecCCcEEEEcCcCCCCCCcccCCCCCCccEEEcCCCCCCCceEe-cCCCCC-CccceeeEe
Q 039705 310 QRE-MM--PSPRVMGEMLLLPTGDVLIINGAKKGTAGWNFATDPNTTPVLYEPDDPINERFSE-LTPTSK-PRMCHSTSV 384 (539)
Q Consensus 310 ~~~-~M--~~~R~~~~~vvlpdG~I~vvGG~~~g~~g~~~~~~~~~~~e~YdP~t~~g~~Wt~-~a~~~~-~R~yhs~a~ 384 (539)
... .. ...+.. +...-| |.+|+..|... .+ +....++.+||+.+. +... +..... -..-+++ +
T Consensus 231 ~~~~~~~~~~~~~~-~~~~~p-g~~~~~~g~~~-v~-----~~~~~~v~~~~~~~g---~~~~~~~~~~~~~~~p~~i-a 298 (329)
T 3fvz_A 231 VREIKHASFGRNVF-AISYIP-GFLFAVNGKPY-FG-----DQEPVQGFVMNFSSG---EIIDVFKPVRKHFDMPHDI-V 298 (329)
T ss_dssp EEEECCTTTTTCEE-EEEEET-TEEEEEECCCC-TT-----CSCCCCEEEEETTTC---CEEEEECCSSSCCSSEEEE-E
T ss_pred EEEEeccccCCCcc-eeeecC-CEEEEeCCCEE-ec-----cCCCcEEEEEEcCCC---eEEEEEcCCCCccCCeeEE-E
Confidence 322 11 112222 223344 77777777531 11 111236889998887 5543 322111 1112344 4
Q ss_pred eCCCCeEEEecCC
Q 039705 385 VLPDGKILVAGSN 397 (539)
Q Consensus 385 llpdG~V~v~GG~ 397 (539)
+.+||.|||+...
T Consensus 299 ~~~dG~lyvad~~ 311 (329)
T 3fvz_A 299 ASEDGTVYIGDAH 311 (329)
T ss_dssp ECTTSEEEEEESS
T ss_pred ECCCCCEEEEECC
Confidence 5799999998764
No 147
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=95.39 E-value=1 Score=46.12 Aligned_cols=210 Identities=11% Similarity=0.117 Sum_probs=108.7
Q ss_pred cCCCcEEEecCCCCCCCeEEEEeCCCCccceeecccccccccccceeEEccCCcEEEEcCccCCeEEEE-ecCCCccee-
Q 039705 109 SANGTIVISGGWSSRGRSVRYLSGCYHACYWKEHHWELSAKRWFSTQHILPDGSFIVVGGRREFSYEYI-LKEGKRIIY- 186 (539)
Q Consensus 109 l~dG~l~v~GG~~~g~~~v~~ydP~~~t~~W~~~~~~m~~~R~y~s~~~L~dG~VyvvGG~~~~~~E~y-P~~~~~~w~- 186 (539)
..||+.+++|+.+ ..+++||.. +.+-.. . +......-.+... |++.+++|+.++ ++.+| ..+. +..
T Consensus 140 ~~d~~~l~~g~~d---g~i~iwd~~--~~~~~~--~-~~~h~~~v~~l~~-~~~~l~sg~~dg-~i~vwd~~~~--~~~~ 207 (435)
T 1p22_A 140 QYDDQKIVSGLRD---NTIKIWDKN--TLECKR--I-LTGHTGSVLCLQY-DERVIITGSSDS-TVRVWDVNTG--EMLN 207 (435)
T ss_dssp ECCSSEEEEEESS---SCEEEEESS--SCCEEE--E-ECCCSSCEEEEEC-CSSEEEEEETTS-CEEEEESSSC--CEEE
T ss_pred EECCCEEEEEeCC---CeEEEEeCC--CCeEEE--E-EcCCCCcEEEEEE-CCCEEEEEcCCC-eEEEEECCCC--cEEE
Confidence 3589999999863 578999987 433221 1 2222222333444 899999888764 56677 4433 221
Q ss_pred eccCccccCCCCCCCCcceEEEeeCCcEEEEEcC--ceeEeeCCCCeEEEEcccCCCCCCccCCCccEEecccccCCCCC
Q 039705 187 DLPILNETTNPSENNLYPFVFLSTDGNLFIFAND--RSILLNPETNEILHVFPILRGGSRNYPASATSALLPIKLQDPNS 264 (539)
Q Consensus 187 ~~~~l~~~~~~~~~~~yp~~~~~~~G~Iyv~Gg~--~~e~yDp~tn~W~~~~p~mp~~~r~yp~~g~av~lpl~~~~~~~ 264 (539)
... ... -+...+..++..++.|+. .+.+||..+.+-......+.+ .. +....+.
T Consensus 208 ~~~---~h~-------~~v~~l~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~-~~-----~~v~~~~-------- 263 (435)
T 1p22_A 208 TLI---HHC-------EAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVG-HR-----AAVNVVD-------- 263 (435)
T ss_dssp EEC---CCC-------SCEEEEECCTTEEEEEETTSCEEEEECSSSSCCEEEEEECC-CS-----SCEEEEE--------
T ss_pred EEc---CCC-------CcEEEEEEcCCEEEEeeCCCcEEEEeCCCCCCceeeeEecC-CC-----CcEEEEE--------
Confidence 111 110 112344456777777775 477889876542211111111 11 1111111
Q ss_pred CCcccEEEEecCCCCCcccccCCCcccccCCceEEEEeeCCCCceeee-ccCCCceeceeEEecCCcEEEEcCcCCCCCC
Q 039705 265 NAIRAEVLICGGAKPEAGVLAGKGEFMNALQDCGRIEITNKSATWQRE-MMPSPRVMGEMLLLPTGDVLIINGAKKGTAG 343 (539)
Q Consensus 265 ~~~~g~Iyv~GG~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~-~M~~~R~~~~~vvlpdG~I~vvGG~~~g~~g 343 (539)
.+++.+++|+.+. .+..+|+.. .+-... .-.... ...+. .+++.+++|+.+ +
T Consensus 264 --~~~~~l~s~~~dg----------------~i~vwd~~~--~~~~~~~~~~~~~--v~~~~-~~~~~l~~g~~d-g--- 316 (435)
T 1p22_A 264 --FDDKYIVSASGDR----------------TIKVWNTST--CEFVRTLNGHKRG--IACLQ-YRDRLVVSGSSD-N--- 316 (435)
T ss_dssp --EETTEEEEEETTS----------------EEEEEETTT--CCEEEEEECCSSC--EEEEE-EETTEEEEEETT-S---
T ss_pred --eCCCEEEEEeCCC----------------eEEEEECCc--CcEEEEEcCCCCc--EEEEE-eCCCEEEEEeCC-C---
Confidence 2567777777541 345677542 211111 111111 12233 388999988865 2
Q ss_pred cccCCCCCCccEEEcCCCCCCCce-EecCCCCCCccceeeEeeCCCCeEEEecCCC
Q 039705 344 WNFATDPNTTPVLYEPDDPINERF-SELTPTSKPRMCHSTSVVLPDGKILVAGSNP 398 (539)
Q Consensus 344 ~~~~~~~~~~~e~YdP~t~~g~~W-t~~a~~~~~R~yhs~a~llpdG~V~v~GG~~ 398 (539)
++.+||..+. +- ..+... .. .+..+..||+.+++|+.+
T Consensus 317 ---------~i~iwd~~~~---~~~~~~~~h-~~----~v~~~~~~~~~l~sg~~d 355 (435)
T 1p22_A 317 ---------TIRLWDIECG---ACLRVLEGH-EE----LVRCIRFDNKRIVSGAYD 355 (435)
T ss_dssp ---------CEEEEETTTC---CEEEEECCC-SS----CEEEEECCSSEEEEEETT
T ss_pred ---------eEEEEECCCC---CEEEEEeCC-cC----cEEEEEecCCEEEEEeCC
Confidence 5789999876 32 222211 11 122233399999999863
No 148
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=95.37 E-value=2.7 Score=42.42 Aligned_cols=71 Identities=13% Similarity=0.127 Sum_probs=37.6
Q ss_pred eeEEccCCcEEEEcCccCCeEEEE-ecCCCcceeecc----CccccCCCCCCCCcceEEEeeCC-cEEEEEcC--ceeEe
Q 039705 154 TQHILPDGSFIVVGGRREFSYEYI-LKEGKRIIYDLP----ILNETTNPSENNLYPFVFLSTDG-NLFIFAND--RSILL 225 (539)
Q Consensus 154 s~~~L~dG~VyvvGG~~~~~~E~y-P~~~~~~w~~~~----~l~~~~~~~~~~~yp~~~~~~~G-~Iyv~Gg~--~~e~y 225 (539)
+.+..+||+.++.| . ...+.+| ..+......... .+..... . --.+...++| ++++.|+. .+.+|
T Consensus 182 ~~~~~~~~~~l~s~-~-d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~----~-v~~~~~~p~~~~~l~s~~~dg~i~iw 254 (447)
T 3dw8_B 182 SISINSDYETYLSA-D-DLRINLWHLEITDRSFNIVDIKPANMEELTE----V-ITAAEFHPNSCNTFVYSSSKGTIRLC 254 (447)
T ss_dssp EEEECTTSSEEEEE-C-SSEEEEEETTEEEEEEEEEECCCSSGGGCCC----C-EEEEEECSSCTTEEEEEETTSCEEEE
T ss_pred EEEEcCCCCEEEEe-C-CCeEEEEECCCCCceeeeeecccccccccCc----c-eEEEEECCCCCcEEEEEeCCCeEEEE
Confidence 44556789998887 4 4567777 332101111110 0111110 0 1112334677 88888875 47889
Q ss_pred eCCCCe
Q 039705 226 NPETNE 231 (539)
Q Consensus 226 Dp~tn~ 231 (539)
|.++.+
T Consensus 255 d~~~~~ 260 (447)
T 3dw8_B 255 DMRASA 260 (447)
T ss_dssp ETTTCS
T ss_pred ECcCCc
Confidence 988765
No 149
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=95.36 E-value=1.8 Score=45.71 Aligned_cols=230 Identities=7% Similarity=0.012 Sum_probs=113.7
Q ss_pred ccccceecCCCcEEEecCCCCCCCeEEEEeCCCCccc--eeeccccccccc-c-cceeEEcc--CCcEEEEcCccCCeEE
Q 039705 102 WSSSGGLSANGTIVISGGWSSRGRSVRYLSGCYHACY--WKEHHWELSAKR-W-FSTQHILP--DGSFIVVGGRREFSYE 175 (539)
Q Consensus 102 ~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydP~~~t~~--W~~~~~~m~~~R-~-y~s~~~L~--dG~VyvvGG~~~~~~E 175 (539)
....-+..+||+++++|+. ..+.+||.. +.. ...... +.... . -.+.+.-+ ||+.+++|+.+ .++.
T Consensus 20 ~v~~~~~spdg~~l~~~~~----~~v~v~~~~--~~~~~~~~~~~-~~~h~~~~v~~~~~sp~~~~~~l~s~~~d-g~v~ 91 (615)
T 1pgu_A 20 FTTHLSYDPTTNAIAYPCG----KSAFVRCLD--DGDSKVPPVVQ-FTGHGSSVVTTVKFSPIKGSQYLCSGDES-GKVI 91 (615)
T ss_dssp CCCCCEEETTTTEEEEEET----TEEEEEECC--SSCCSSCSEEE-ECTTTTSCEEEEEECSSTTCCEEEEEETT-SEEE
T ss_pred ceeEEEECCCCCEEEEecC----CeEEEEECC--CCCCccccceE-EecCCCceEEEEEECcCCCCCEEEEecCC-CEEE
Confidence 3344566789999999872 579999987 430 011111 32222 2 23455667 89999988875 3566
Q ss_pred EE-ecCC--Cc--ceeeccCccccCCCCCCCCcceEEEeeCCcEEEEEcCc----eeEeeCCCCeEEEEcccCCCCCCcc
Q 039705 176 YI-LKEG--KR--IIYDLPILNETTNPSENNLYPFVFLSTDGNLFIFANDR----SILLNPETNEILHVFPILRGGSRNY 246 (539)
Q Consensus 176 ~y-P~~~--~~--~w~~~~~l~~~~~~~~~~~yp~~~~~~~G~Iyv~Gg~~----~e~yDp~tn~W~~~~p~mp~~~r~y 246 (539)
+| ..++ .. .......+..... . --.+...++|+.+++++.+ ..++.+.+++-...+ .. ....
T Consensus 92 vw~~~~~~~~~~~~~~~~~~~~~~~~----~-v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d~~~~~~~~---~~-~~~~ 162 (615)
T 1pgu_A 92 VWGWTFDKESNSVEVNVKSEFQVLAG----P-ISDISWDFEGRRLCVVGEGRDNFGVFISWDSGNSLGEV---SG-HSQR 162 (615)
T ss_dssp EEEEEEEGGGTEEEEEEEEEEECCSS----C-EEEEEECTTSSEEEEEECCSSCSEEEEETTTCCEEEEC---CS-CSSC
T ss_pred EEeCCCCcccccccccccchhhcccc----c-EEEEEEeCCCCEEEEeccCCCCccEEEEEECCCcceee---ec-CCcc
Confidence 66 3211 00 0011111111000 0 1122344789988888754 344444455433222 22 1110
Q ss_pred CCCccEEecccccCCCCCCCcccE-EEEecCCCCCcccccCCCcccccCCceEEEEeeCCCCceeee-ccCC-Cc---ee
Q 039705 247 PASATSALLPIKLQDPNSNAIRAE-VLICGGAKPEAGVLAGKGEFMNALQDCGRIEITNKSATWQRE-MMPS-PR---VM 320 (539)
Q Consensus 247 p~~g~av~lpl~~~~~~~~~~~g~-Iyv~GG~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~-~M~~-~R---~~ 320 (539)
--.....| +++ ++++|+.+. .+..+|+. ..+.. .+.. .. .-
T Consensus 163 --v~~~~~~~-----------~~~~~l~~~~~d~----------------~v~vwd~~----~~~~~~~~~~~~~~~~~v 209 (615)
T 1pgu_A 163 --INACHLKQ-----------SRPMRSMTVGDDG----------------SVVFYQGP----PFKFSASDRTHHKQGSFV 209 (615)
T ss_dssp --EEEEEECS-----------SSSCEEEEEETTT----------------EEEEEETT----TBEEEEEECSSSCTTCCE
T ss_pred --EEEEEECC-----------CCCcEEEEEeCCC----------------cEEEEeCC----CcceeeeecccCCCCceE
Confidence 01122221 343 677777541 34556643 22222 2221 11 12
Q ss_pred ceeEEecC-CcEEEEcCcCCCCCCcccCCCCCCccEEEcCCCCCCCceE-ecCCC--CCCccceeeEeeCCCCeEEEecC
Q 039705 321 GEMLLLPT-GDVLIINGAKKGTAGWNFATDPNTTPVLYEPDDPINERFS-ELTPT--SKPRMCHSTSVVLPDGKILVAGS 396 (539)
Q Consensus 321 ~~~vvlpd-G~I~vvGG~~~g~~g~~~~~~~~~~~e~YdP~t~~g~~Wt-~~a~~--~~~R~yhs~a~llpdG~V~v~GG 396 (539)
.+....|| |+.+++|+.+ + .+.+||..+. +.. .+... .....-.+. .+. |++.+++|+
T Consensus 210 ~~~~~~~~~~~~l~~~~~d-g------------~i~vwd~~~~---~~~~~~~~~~~~~~~~v~~~-~~~-~~~~l~~~~ 271 (615)
T 1pgu_A 210 RDVEFSPDSGEFVITVGSD-R------------KISCFDGKSG---EFLKYIEDDQEPVQGGIFAL-SWL-DSQKFATVG 271 (615)
T ss_dssp EEEEECSTTCCEEEEEETT-C------------CEEEEETTTC---CEEEECCBTTBCCCSCEEEE-EES-SSSEEEEEE
T ss_pred EEEEECCCCCCEEEEEeCC-C------------eEEEEECCCC---CEeEEecccccccCCceEEE-EEc-CCCEEEEEc
Confidence 23455788 9999998865 2 5789998876 433 23110 111111222 334 899988888
Q ss_pred CCC
Q 039705 397 NPH 399 (539)
Q Consensus 397 ~~~ 399 (539)
.+.
T Consensus 272 ~d~ 274 (615)
T 1pgu_A 272 ADA 274 (615)
T ss_dssp TTS
T ss_pred CCC
Confidence 643
No 150
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=95.33 E-value=2 Score=41.16 Aligned_cols=191 Identities=10% Similarity=0.086 Sum_probs=104.3
Q ss_pred EccCCcEEEEcCccC-CeEEEE-ecCCCccee-eccCccccCCCCCCCCcceEEEeeCCcEEEEEc--CceeEeeCCCCe
Q 039705 157 ILPDGSFIVVGGRRE-FSYEYI-LKEGKRIIY-DLPILNETTNPSENNLYPFVFLSTDGNLFIFAN--DRSILLNPETNE 231 (539)
Q Consensus 157 ~L~dG~VyvvGG~~~-~~~E~y-P~~~~~~w~-~~~~l~~~~~~~~~~~yp~~~~~~~G~Iyv~Gg--~~~e~yDp~tn~ 231 (539)
.+.++.+|+..|..+ .++..+ ++++ +-. ..++. ...|.......+++||+... +.+.+||+++-+
T Consensus 27 ~~~~~~LyestG~~g~S~v~~vD~~tg--kv~~~~~l~--------~~~fgeGi~~~~~~ly~ltw~~~~v~v~D~~tl~ 96 (243)
T 3mbr_X 27 FYLRGHLYESTGETGRSSVRKVDLETG--RILQRAEVP--------PPYFGAGIVAWRDRLIQLTWRNHEGFVYDLATLT 96 (243)
T ss_dssp EEETTEEEEEECCTTSCEEEEEETTTC--CEEEEEECC--------TTCCEEEEEEETTEEEEEESSSSEEEEEETTTTE
T ss_pred EEECCEEEEECCCCCCceEEEEECCCC--CEEEEEeCC--------CCcceeEEEEeCCEEEEEEeeCCEEEEEECCcCc
Confidence 344789999999865 467777 7665 332 22221 12344556667899999974 458899999988
Q ss_pred EEEEcccCCCCCCccCCCccEEecccccCCCCCCCcccEEEEecCCCCCcccccCCCcccccCCceEEEEeeCCC--Cce
Q 039705 232 ILHVFPILRGGSRNYPASATSALLPIKLQDPNSNAIRAEVLICGGAKPEAGVLAGKGEFMNALQDCGRIEITNKS--ATW 309 (539)
Q Consensus 232 W~~~~p~mp~~~r~yp~~g~av~lpl~~~~~~~~~~~g~Iyv~GG~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~--~~W 309 (539)
-...++. + ..|-+.. + .++++|+.=|.+ .+..+|+..-. .+.
T Consensus 97 ~~~ti~~-~-------~~Gwglt-~----------dg~~L~vSdgs~-----------------~l~~iDp~t~~~~~~I 140 (243)
T 3mbr_X 97 PRARFRY-P-------GEGWALT-S----------DDSHLYMSDGTA-----------------VIRKLDPDTLQQVGSI 140 (243)
T ss_dssp EEEEEEC-S-------SCCCEEE-E----------CSSCEEEECSSS-----------------EEEEECTTTCCEEEEE
T ss_pred EEEEEeC-C-------CCceEEe-e----------CCCEEEEECCCC-----------------eEEEEeCCCCeEEEEE
Confidence 7655532 1 1233332 1 256677765522 34556653200 111
Q ss_pred eeeccCCCceeceeEEecCCcEEEEcCcCCCCCCcccCCCCCCccEEEcCCCCCCCceEecCCCC-------CCc--cce
Q 039705 310 QREMMPSPRVMGEMLLLPTGDVLIINGAKKGTAGWNFATDPNTTPVLYEPDDPINERFSELTPTS-------KPR--MCH 380 (539)
Q Consensus 310 ~~~~M~~~R~~~~~vvlpdG~I~vvGG~~~g~~g~~~~~~~~~~~e~YdP~t~~g~~Wt~~a~~~-------~~R--~yh 380 (539)
+....+.+-...+-....||+||+-.-.+ ..+.+-||++..=..|-.++.+. .+. .--
T Consensus 141 ~V~~~g~~~~~lNeLe~~~G~lyanvw~s-------------~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlN 207 (243)
T 3mbr_X 141 KVTAGGRPLDNLNELEWVNGELLANVWLT-------------SRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLN 207 (243)
T ss_dssp ECEETTEECCCEEEEEEETTEEEEEETTT-------------TEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEE
T ss_pred EEccCCcccccceeeEEeCCEEEEEECCC-------------CeEEEEECCCCCEEEEEECCcCccccccccCCcCCceE
Confidence 11122222122233344599999644211 16789999998333344444321 111 223
Q ss_pred eeEeeCCCCeEEEecCCCCCCCccCCCCCCCcceeeEE
Q 039705 381 STSVVLPDGKILVAGSNPHSRYNLTSGSKYPTELRIEK 418 (539)
Q Consensus 381 s~a~llpdG~V~v~GG~~~~~~~~~~~~~~p~~~~vE~ 418 (539)
+.|.---.+|+||+|-+ +|..++|++
T Consensus 208 GIA~d~~~~~lfVTGK~------------wp~~~~v~~ 233 (243)
T 3mbr_X 208 GIAFDAEHDRLFVTGKR------------WPMLYEIRL 233 (243)
T ss_dssp EEEEETTTTEEEEEETT------------CSEEEEEEE
T ss_pred EEEEcCCCCEEEEECCC------------CCcEEEEEE
Confidence 55554336889999874 444667775
No 151
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=95.31 E-value=1.4 Score=45.25 Aligned_cols=60 Identities=13% Similarity=0.232 Sum_probs=40.1
Q ss_pred eeEEecCCcEEEEcCcCCCCCCcccCCCCCCccEEEcCCCCCCCceEecCCCCCCccceeeEeeCCCCeEEEecCCC
Q 039705 322 EMLLLPTGDVLIINGAKKGTAGWNFATDPNTTPVLYEPDDPINERFSELTPTSKPRMCHSTSVVLPDGKILVAGSNP 398 (539)
Q Consensus 322 ~~vvlpdG~I~vvGG~~~g~~g~~~~~~~~~~~e~YdP~t~~g~~Wt~~a~~~~~R~yhs~a~llpdG~V~v~GG~~ 398 (539)
....-|||+.+++++...+ ...+.+||.++. +...+.... ......+.|||+.++.++..
T Consensus 315 ~~~~spdG~~l~~~~~~~g----------~~~i~~~d~~~~---~~~~l~~~~----~~~~~~~spdg~~l~~~s~~ 374 (415)
T 2hqs_A 315 DADVSSDGKFMVMVSSNGG----------QQHIAKQDLATG---GVQVLSSTF----LDETPSLAPNGTMVIYSSSQ 374 (415)
T ss_dssp EEEECTTSSEEEEEEECSS----------CEEEEEEETTTC---CEEECCCSS----SCEEEEECTTSSEEEEEEEE
T ss_pred CeEECCCCCEEEEEECcCC----------ceEEEEEECCCC---CEEEecCCC----CcCCeEEcCCCCEEEEEEcC
Confidence 3355699998887765421 126889999988 776654432 22334567999988887753
No 152
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=95.18 E-value=1.4 Score=42.97 Aligned_cols=180 Identities=10% Similarity=0.032 Sum_probs=95.2
Q ss_pred EccCCcEEEEcCccCCeEEEE-ecCCCccee-eccCccccCCCCCCCCcceEEEeeCCcEEEEEc--CceeEeeCCCCeE
Q 039705 157 ILPDGSFIVVGGRREFSYEYI-LKEGKRIIY-DLPILNETTNPSENNLYPFVFLSTDGNLFIFAN--DRSILLNPETNEI 232 (539)
Q Consensus 157 ~L~dG~VyvvGG~~~~~~E~y-P~~~~~~w~-~~~~l~~~~~~~~~~~yp~~~~~~~G~Iyv~Gg--~~~e~yDp~tn~W 232 (539)
...++.+|+..|..+. +..+ +++. +-. .. +.. ..|.......+++||+... +.+.+||+++.+.
T Consensus 61 ~~~~~~Ly~stG~~g~-v~~iD~~Tg--kv~~~~--l~~-------~~FgeGit~~g~~Ly~ltw~~~~v~V~D~~Tl~~ 128 (268)
T 3nok_A 61 VFHQGHFFESTGHQGT-LRQLSLESA--QPVWME--RLG-------NIFAEGLASDGERLYQLTWTEGLLFTWSGMPPQR 128 (268)
T ss_dssp EEETTEEEEEETTTTE-EEECCSSCS--SCSEEE--ECT-------TCCEEEEEECSSCEEEEESSSCEEEEEETTTTEE
T ss_pred EEECCEEEEEcCCCCE-EEEEECCCC--cEEeEE--CCC-------CcceeEEEEeCCEEEEEEccCCEEEEEECCcCcE
Confidence 3447899999987654 6666 6665 321 11 222 2343445666889999974 5688999999887
Q ss_pred EEEcccCCCCCCccCCCccEEecccccCCCCCCCcccEEEEecCCCCCcccccCCCcccccCCceEEEEeeCCC--Ccee
Q 039705 233 LHVFPILRGGSRNYPASATSALLPIKLQDPNSNAIRAEVLICGGAKPEAGVLAGKGEFMNALQDCGRIEITNKS--ATWQ 310 (539)
Q Consensus 233 ~~~~p~mp~~~r~yp~~g~av~lpl~~~~~~~~~~~g~Iyv~GG~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~--~~W~ 310 (539)
...++--+ .|.+.. + .+.++|+.-|.+ .+..+|+..-. .+..
T Consensus 129 ~~ti~~~~--------eGwGLt-~----------Dg~~L~vSdGs~-----------------~l~~iDp~T~~v~~~I~ 172 (268)
T 3nok_A 129 ERTTRYSG--------EGWGLC-Y----------WNGKLVRSDGGT-----------------MLTFHEPDGFALVGAVQ 172 (268)
T ss_dssp EEEEECSS--------CCCCEE-E----------ETTEEEEECSSS-----------------EEEEECTTTCCEEEEEE
T ss_pred EEEEeCCC--------ceeEEe-c----------CCCEEEEECCCC-----------------EEEEEcCCCCeEEEEEE
Confidence 65554311 132222 1 256777775522 34556653200 1111
Q ss_pred eeccCCCceeceeEEecCCcEEEEcCcCCCCCCcccCCCCCCccEEEcCCCCCCCceEecCCCC---------CCcccee
Q 039705 311 REMMPSPRVMGEMLLLPTGDVLIINGAKKGTAGWNFATDPNTTPVLYEPDDPINERFSELTPTS---------KPRMCHS 381 (539)
Q Consensus 311 ~~~M~~~R~~~~~vvlpdG~I~vvGG~~~g~~g~~~~~~~~~~~e~YdP~t~~g~~Wt~~a~~~---------~~R~yhs 381 (539)
....+.+-...+-....||+||+-- ... .++.+-||++.+=..|-.++.+. ..-.--+
T Consensus 173 V~~~g~~v~~lNeLe~~dG~lyanv-w~s------------~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNG 239 (268)
T 3nok_A 173 VKLRGQPVELINELECANGVIYANI-WHS------------SDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNG 239 (268)
T ss_dssp CEETTEECCCEEEEEEETTEEEEEE-TTC------------SEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEE
T ss_pred eCCCCcccccccccEEeCCEEEEEE-CCC------------CeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEE
Confidence 1111111112222334599999633 221 16889999998333344443211 1112234
Q ss_pred eEeeCCCCeEEEecCC
Q 039705 382 TSVVLPDGKILVAGSN 397 (539)
Q Consensus 382 ~a~llpdG~V~v~GG~ 397 (539)
.|.---.+|+||+|-+
T Consensus 240 IA~dp~~~rlfVTGK~ 255 (268)
T 3nok_A 240 IAVEPGSGRIFMTGKL 255 (268)
T ss_dssp EEECTTTCCEEEEETT
T ss_pred EEEcCCCCEEEEeCCC
Confidence 5543235789998874
No 153
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=95.16 E-value=2.3 Score=40.52 Aligned_cols=62 Identities=15% Similarity=0.231 Sum_probs=35.7
Q ss_pred CCcEEEecCCCCCCCeEEEEeCCCC-----ccceeecccccccccc-cceeEEccC--CcEEEEcCccCCeEEEE
Q 039705 111 NGTIVISGGWSSRGRSVRYLSGCYH-----ACYWKEHHWELSAKRW-FSTQHILPD--GSFIVVGGRREFSYEYI 177 (539)
Q Consensus 111 dG~l~v~GG~~~g~~~v~~ydP~~~-----t~~W~~~~~~m~~~R~-y~s~~~L~d--G~VyvvGG~~~~~~E~y 177 (539)
|+.++++|+.+ ..+++||...+ ...|..... +..... -.+.+..++ ++.+++|+.++ .+.+|
T Consensus 70 d~~~l~s~~~d---g~v~vwd~~~~~~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~l~~~~~dg-~v~iw 139 (351)
T 3f3f_A 70 YGRIIASASYD---KTVKLWEEDPDQEECSGRRWNKLCT-LNDSKGSLYSVKFAPAHLGLKLACLGNDG-ILRLY 139 (351)
T ss_dssp GCSEEEEEETT---SCEEEEEECTTSCTTSSCSEEEEEE-ECCCSSCEEEEEECCGGGCSEEEEEETTC-EEEEE
T ss_pred CCCEEEEEcCC---CeEEEEecCCCcccccccCcceeee-ecccCCceeEEEEcCCCCCcEEEEecCCC-cEEEe
Confidence 68999999863 56888887621 122333322 322221 223445556 88888888653 56666
No 154
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=94.87 E-value=0.75 Score=46.24 Aligned_cols=192 Identities=12% Similarity=0.075 Sum_probs=99.5
Q ss_pred ceecCCCcEEEec-CCCCCCCeEEEEeCCCCccceeecccccccccccceeEEccCCcEEEEcCccCCeEEEE-ecCCCc
Q 039705 106 GGLSANGTIVISG-GWSSRGRSVRYLSGCYHACYWKEHHWELSAKRWFSTQHILPDGSFIVVGGRREFSYEYI-LKEGKR 183 (539)
Q Consensus 106 ~~~l~dG~l~v~G-G~~~g~~~v~~ydP~~~t~~W~~~~~~m~~~R~y~s~~~L~dG~VyvvGG~~~~~~E~y-P~~~~~ 183 (539)
.++.+||++++++ |..+ ..++++|+. +.+-.. . +.....-.+++.-+||+.++.++.+ ...++ ..++
T Consensus 139 v~fSpDg~~la~as~~~d--~~i~iwd~~--~~~~~~--~-~~~~~~V~~v~fspdg~~l~s~s~~--~~~~~~~~~~-- 207 (365)
T 4h5i_A 139 VYISREGTVAAIASSKVP--AIMRIIDPS--DLTEKF--E-IETRGEVKDLHFSTDGKVVAYITGS--SLEVISTVTG-- 207 (365)
T ss_dssp EEECTTSSCEEEEESCSS--CEEEEEETT--TTEEEE--E-EECSSCCCEEEECTTSSEEEEECSS--CEEEEETTTC--
T ss_pred EEEcCCCCEEEEEECCCC--CEEEEeECC--CCcEEE--E-eCCCCceEEEEEccCCceEEeccce--eEEEEEeccC--
Confidence 3456899987654 4333 689999998 544322 1 3322323355666799999888743 33444 3332
Q ss_pred ceeeccCccccCCCCCCCCcceEEEeeCCcEEEEEcCc------eeEeeCCCCeEEEEc--ccCCCCCCccCCCccEEec
Q 039705 184 IIYDLPILNETTNPSENNLYPFVFLSTDGNLFIFANDR------SILLNPETNEILHVF--PILRGGSRNYPASATSALL 255 (539)
Q Consensus 184 ~w~~~~~l~~~~~~~~~~~yp~~~~~~~G~Iyv~Gg~~------~e~yDp~tn~W~~~~--p~mp~~~r~yp~~g~av~l 255 (539)
+........... ...-.+...++|+.++.++.+ ...+|....... .. ..+.. .. .....+
T Consensus 208 ~~~~~~~~~~~~-----~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~-~~~~~~~~~--~~----~~V~~~ 275 (365)
T 4h5i_A 208 SCIARKTDFDKN-----WSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTS-VLRSKQVTN--RF----KGITSM 275 (365)
T ss_dssp CEEEEECCCCTT-----EEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEE-EEEEEEEES--SC----SCEEEE
T ss_pred cceeeeecCCCC-----CCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceec-ceeeeeecC--CC----CCeEeE
Confidence 221111111100 001122345799988887522 345665555443 11 11111 01 111112
Q ss_pred ccccCCCCCCCcccEEEEecCCCCCcccccCCCcccccCCceEEEEeeCCCCceeee-c---cCCCceeceeEEecCCcE
Q 039705 256 PIKLQDPNSNAIRAEVLICGGAKPEAGVLAGKGEFMNALQDCGRIEITNKSATWQRE-M---MPSPRVMGEMLLLPTGDV 331 (539)
Q Consensus 256 pl~~~~~~~~~~~g~Iyv~GG~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~-~---M~~~R~~~~~vvlpdG~I 331 (539)
...| +++++++|+.+. ++..+|... .+.. . -+..... +..--|||+.
T Consensus 276 ~~Sp--------dg~~lasgs~D~----------------~V~iwd~~~----~~~~~~~~~gH~~~V~-~v~fSpdg~~ 326 (365)
T 4h5i_A 276 DVDM--------KGELAVLASNDN----------------SIALVKLKD----LSMSKIFKQAHSFAIT-EVTISPDSTY 326 (365)
T ss_dssp EECT--------TSCEEEEEETTS----------------CEEEEETTT----TEEEEEETTSSSSCEE-EEEECTTSCE
T ss_pred EECC--------CCCceEEEcCCC----------------EEEEEECCC----CcEEEEecCcccCCEE-EEEECCCCCE
Confidence 2222 789999998752 356677532 2222 2 2233333 2345699999
Q ss_pred EEEcCcCCCCCCcccCCCCCCccEEEcCCCC
Q 039705 332 LIINGAKKGTAGWNFATDPNTTPVLYEPDDP 362 (539)
Q Consensus 332 ~vvGG~~~g~~g~~~~~~~~~~~e~YdP~t~ 362 (539)
++.|+.+. ++-+||-.++
T Consensus 327 laS~S~D~-------------tvrvw~ip~~ 344 (365)
T 4h5i_A 327 VASVSAAN-------------TIHIIKLPLN 344 (365)
T ss_dssp EEEEETTS-------------EEEEEECCTT
T ss_pred EEEEeCCC-------------eEEEEEcCCC
Confidence 99988762 6788886544
No 155
>4d9s_A UVB-resistance protein UVR8; UV resistance, UV-B photoreceptor, tryptophan chromophores, homodimer, COP1, chromatin-binding protein; 1.70A {Arabidopsis thaliana} PDB: 4dnw_A 4dnu_A 4dnv_A
Probab=94.86 E-value=1.4 Score=45.40 Aligned_cols=72 Identities=19% Similarity=0.251 Sum_probs=40.3
Q ss_pred eceeEEecCCcEEEEcCcCCCCCCcccCCCCCCccEEEc-CCCCCCCceEecCCCCCCccceeeEeeCCCCeEEEecCCC
Q 039705 320 MGEMLLLPTGDVLIINGAKKGTAGWNFATDPNTTPVLYE-PDDPINERFSELTPTSKPRMCHSTSVVLPDGKILVAGSNP 398 (539)
Q Consensus 320 ~~~~vvlpdG~I~vvGG~~~g~~g~~~~~~~~~~~e~Yd-P~t~~g~~Wt~~a~~~~~R~yhs~a~llpdG~V~v~GG~~ 398 (539)
.|.+++.-||+||..|-...|.-|.+... ....+..-+ |... +...++. -.+|+.| |..||+||.-|-+.
T Consensus 287 ~hs~alt~~G~v~~wG~n~~GqLG~g~~~-~~~~p~~v~~~~~~---~v~~va~----G~~hs~a-lt~~G~v~~wG~n~ 357 (406)
T 4d9s_A 287 RHTMALTSDGKLYGWGWNKFGQVGVGNNL-DQCSPVQVRFPDDQ---KVVQVSC----GWRHTLA-VTERNNVFAWGRGT 357 (406)
T ss_dssp SEEEEEETTSCEEEEECCTTSTTCSSSSS-CEEEEEEECCGGGC---CEEEEEE----CSSEEEE-EETTSCEEEEECCT
T ss_pred CEEEEEcCCCeEEEeeCCCCCCCCCCCCC-CCccCEEEeccCCC---cEEEEEe----CCCeEEE-EeCCCCEEEecCCC
Confidence 35566778999999996554543322111 111122111 2222 4444432 3567655 55799999999886
Q ss_pred CC
Q 039705 399 HS 400 (539)
Q Consensus 399 ~~ 400 (539)
+.
T Consensus 358 ~G 359 (406)
T 4d9s_A 358 NG 359 (406)
T ss_dssp TS
T ss_pred CC
Confidence 65
No 156
>1w8o_A Bacterial sialidase; 3D-structure, glycosidase, hydrolase, beta- propeller; HET: LBT CIT; 1.70A {Micromonospora viridifaciens} SCOP: b.1.18.2 b.18.1.1 b.68.1.1 PDB: 1w8n_A* 1eut_A 1euu_A* 1wcq_A* 2bzd_A* 2ber_A* 1eur_A 1eus_A*
Probab=94.82 E-value=5.4 Score=43.00 Aligned_cols=131 Identities=16% Similarity=0.136 Sum_probs=69.7
Q ss_pred CCCCCceEecCCCCCC-ccceeeEeeCCCCeEEEecCCCCCCCccCCCCCCCcceeeEEecCCCCCCCcCCCCCceeecC
Q 039705 361 DPINERFSELTPTSKP-RMCHSTSVVLPDGKILVAGSNPHSRYNLTSGSKYPTELRIEKFYPPYFDESFASYRPSIVSKF 439 (539)
Q Consensus 361 t~~g~~Wt~~a~~~~~-R~yhs~a~llpdG~V~v~GG~~~~~~~~~~~~~~p~~~~vE~y~Ppyl~~~~~~~RP~i~~~~ 439 (539)
.|.|++|+....+... -.| +..+.++||+|+++.-.. . ......|.+..|... .-| . ...
T Consensus 305 ~D~G~tW~~~~~l~~~~~~Y-~~l~~~~dg~i~~~ye~~-~------------~i~~~~~~~~~l~~~---~~~-~-~~~ 365 (601)
T 1w8o_A 305 CDDGQTWPVSKVFQPGSMSY-STLTALPDGTYGLLYEPG-T------------GIRYANFNLAWLGGI---CAP-F-TIP 365 (601)
T ss_dssp SSTTSCCCEEEEEEEEECCC-EEEEECTTSCEEEEECCS-S------------EEEEEEECHHHHTBC---SCC-E-ECC
T ss_pred CCCCCCCCCceEeCCCCCCC-CeEEEcCCCeEEEEEecC-C------------cceEEEecHHHhccc---cCC-C-cCc
Confidence 4567799864322211 233 344557999999885422 1 244567777777643 122 2 231
Q ss_pred CCceeecCCEEEEEEEecccc-cccCcEEEEEEcCCccccccCCCceeEeccceeeeecCCc-eEEEEEEcCCCCCcCCC
Q 039705 440 KGKMLKYGQNFVIQFKLDELE-VSLNDLKVTMYAPPFTTHGVSMGQRLLVPATKELIDVGSG-IFQVSVMAPPTAKIAPP 517 (539)
Q Consensus 440 ~p~~~~~g~~~~v~~~~~~~~-~~~~~~~v~l~~~~~~TH~~n~~QR~~~L~~~~~~~~g~~-~~~~~~~~P~~~~~~pp 517 (539)
+.++..|++++|+++..... ......+++|..+.-.|= +-....+ ..|.+ +..++|++|.. +.+
T Consensus 366 -~~~~~~g~~~~~~~~vtn~~~~~~~~~~~~~~~~~~~~~------~~~~~~~----~~g~~~t~~~~vt~~~~---~~~ 431 (601)
T 1w8o_A 366 -DVALEPGQQVTVPVAVTNQSGIAVPKPSLQLDASPDWQV------QGSVEPL----MPGRQAKGQVTITVPAG---TTP 431 (601)
T ss_dssp -CEEECTTCEEEEEEEEECCSSSCBSSCEEEEECCTTSEE------EEEECCB----CTTCEEEEEEEEECCTT---CCC
T ss_pred -cceecCCceeEEEEEEECCCceeccCceEEEecCCCcEE------ecccccc----CCCCceEEEEEEecCCC---CCC
Confidence 45688898888887653321 111225777666443331 1111111 23432 23457778775 458
Q ss_pred cceEEEE
Q 039705 518 SFYLLFV 524 (539)
Q Consensus 518 G~ymlf~ 524 (539)
|.|+|=+
T Consensus 432 g~y~l~~ 438 (601)
T 1w8o_A 432 GRYRVGA 438 (601)
T ss_dssp EEEEEEE
T ss_pred CcEEeeE
Confidence 9998744
No 157
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=94.81 E-value=0.67 Score=47.16 Aligned_cols=136 Identities=13% Similarity=0.124 Sum_probs=68.0
Q ss_pred EECCCCCEEeCccCCCcccccceecC-CCcEEEecCCCCCCCeEEEEeCCCCc---cc-eeecccccccccccceeEEcc
Q 039705 85 YDAESAAIRPLKILTDTWSSSGGLSA-NGTIVISGGWSSRGRSVRYLSGCYHA---CY-WKEHHWELSAKRWFSTQHILP 159 (539)
Q Consensus 85 yDp~t~~w~~l~~~~~~~c~~~~~l~-dG~l~v~GG~~~g~~~v~~ydP~~~t---~~-W~~~~~~m~~~R~y~s~~~L~ 159 (539)
|++.......+...+......-++.+ ||.++++|+.+ ..+++||.. + .. +..... +.....-.+++..+
T Consensus 48 w~~~g~~~~~~~~~h~~~V~~~~~s~~~~~~l~s~s~d---g~v~vwd~~--~~~~~~~~~~~~~-~~h~~~v~~~~~~~ 121 (437)
T 3gre_A 48 GNLRGKLIATLMENEPNSITSSAVSPGETPYLITGSDQ---GVIKIWNLK--EIIVGEVYSSSLT-YDCSSTVTQITMIP 121 (437)
T ss_dssp GGCCCCEEEEECTTTTSCEEEEEEECSSSCEEEEEETT---SEEEEEEHH--HHHTTCCCSCSEE-EECSSCEEEEEECT
T ss_pred ccccceEEeeeccCCCCceEEEEECCCCCCEEEEecCC---ceEEEeECc--ccccCcccceeee-ccCCCCEEEEEEeC
Confidence 44443333333223322222334567 89999999863 578999975 3 21 111111 12222223455566
Q ss_pred CCcEEEEcCccCCeEEEE-ec---CCCccee---------eccCccccCCCCCCCCcceEE---EeeCCcEEEEEcC--c
Q 039705 160 DGSFIVVGGRREFSYEYI-LK---EGKRIIY---------DLPILNETTNPSENNLYPFVF---LSTDGNLFIFAND--R 221 (539)
Q Consensus 160 dG~VyvvGG~~~~~~E~y-P~---~~~~~w~---------~~~~l~~~~~~~~~~~yp~~~---~~~~G~Iyv~Gg~--~ 221 (539)
+++.+++|+.++ ++.+| .. .. +.. ...+-.... ..+.... ..+++++++.|+. .
T Consensus 122 ~~~~l~s~s~dg-~i~vwd~~~~~~~--~~~~~~~~~~i~~~~~~~~~~-----~~~~~~~~~~~~~~~~~l~~~~~d~~ 193 (437)
T 3gre_A 122 NFDAFAVSSKDG-QIIVLKVNHYQQE--SEVKFLNCECIRKINLKNFGK-----NEYAVRMRAFVNEEKSLLVALTNLSR 193 (437)
T ss_dssp TSSEEEEEETTS-EEEEEEEEEEEET--TEEEEEEEEEEEEEEGGGGSS-----CCCEEEEEEEECSSCEEEEEEETTSE
T ss_pred CCCEEEEEeCCC-EEEEEEeccccCC--ceeeccccceeEEEEccCccc-----ccCceEEEEEEcCCCCEEEEEeCCCe
Confidence 889988888764 44555 31 11 110 000000000 0111111 1246888888875 4
Q ss_pred eeEeeCCCCeEEE
Q 039705 222 SILLNPETNEILH 234 (539)
Q Consensus 222 ~e~yDp~tn~W~~ 234 (539)
+.+||.++.+-.+
T Consensus 194 i~iwd~~~~~~~~ 206 (437)
T 3gre_A 194 VIIFDIRTLERLQ 206 (437)
T ss_dssp EEEEETTTCCEEE
T ss_pred EEEEeCCCCeeeE
Confidence 7789998877543
No 158
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=94.74 E-value=2.3 Score=41.06 Aligned_cols=108 Identities=12% Similarity=0.055 Sum_probs=55.2
Q ss_pred eecCCCcEEEecCCCCCCCeEEEEeCCCCccc-eeecccccccccccceeEEccCCc-EEEEcCccCCeEEEE-e-cCCC
Q 039705 107 GLSANGTIVISGGWSSRGRSVRYLSGCYHACY-WKEHHWELSAKRWFSTQHILPDGS-FIVVGGRREFSYEYI-L-KEGK 182 (539)
Q Consensus 107 ~~l~dG~l~v~GG~~~g~~~v~~ydP~~~t~~-W~~~~~~m~~~R~y~s~~~L~dG~-VyvvGG~~~~~~E~y-P-~~~~ 182 (539)
...++|.++++|+.. ..+++||.. +.. .............-.+.+..++|+ .+++|+.++ .+.+| . ...
T Consensus 18 ~~s~~~~~l~~~~~d---~~v~iw~~~--~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg-~i~~wd~~~~~- 90 (342)
T 1yfq_A 18 KIIPSKSLLLITSWD---GSLTVYKFD--IQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQG-EILKVDLIGSP- 90 (342)
T ss_dssp EEEGGGTEEEEEETT---SEEEEEEEE--TTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTS-CEEEECSSSSS-
T ss_pred EEcCCCCEEEEEcCC---CeEEEEEeC--CCCccccceeeeecCCceEEEEECCCCCcEEEEEcCCC-eEEEEEeccCC-
Confidence 345678888888753 578888876 333 111111011222223445556899 888887654 56677 5 443
Q ss_pred cceeeccCccccCCCCCCCCcceEEEeeCCcEEEEEcCc--eeEeeCCC
Q 039705 183 RIIYDLPILNETTNPSENNLYPFVFLSTDGNLFIFANDR--SILLNPET 229 (539)
Q Consensus 183 ~~w~~~~~l~~~~~~~~~~~yp~~~~~~~G~Iyv~Gg~~--~e~yDp~t 229 (539)
........ .... ... .+...+ +++++.++.+ +.+||.++
T Consensus 91 -~~~~~~~~-~~~~----~v~-~l~~~~-~~~l~s~~~d~~i~iwd~~~ 131 (342)
T 1yfq_A 91 -SFQALTNN-EANL----GIC-RICKYG-DDKLIAASWDGLIEVIDPRN 131 (342)
T ss_dssp -SEEECBSC-CCCS----CEE-EEEEET-TTEEEEEETTSEEEEECHHH
T ss_pred -ceEecccc-CCCC----ceE-EEEeCC-CCEEEEEcCCCeEEEEcccc
Confidence 22211110 0100 001 112234 7777777754 66788664
No 159
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=94.74 E-value=3 Score=39.78 Aligned_cols=110 Identities=14% Similarity=0.042 Sum_probs=56.8
Q ss_pred cCCCcEEEe-------cCCCCCCCeEEEEeCCCCccceeeccc-ccc-cccccceeEEccC-CcEEEEcCccCCeEEEE-
Q 039705 109 SANGTIVIS-------GGWSSRGRSVRYLSGCYHACYWKEHHW-ELS-AKRWFSTQHILPD-GSFIVVGGRREFSYEYI- 177 (539)
Q Consensus 109 l~dG~l~v~-------GG~~~g~~~v~~ydP~~~t~~W~~~~~-~m~-~~R~y~s~~~L~d-G~VyvvGG~~~~~~E~y- 177 (539)
..+|++|++ +.. ...+.+||+. +.++..... ... ....-.+.+.-.| |++||....+ .+.+|
T Consensus 26 ~~~g~l~~~~~~~~~~~~~---~~~i~~~d~~--~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~~~--~l~~~d 98 (314)
T 1pjx_A 26 DKNGDFYIVAPEVEVNGKP---AGEILRIDLK--TGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADMRL--GLLVVQ 98 (314)
T ss_dssp CTTSCEEEEETTCEETTEE---CCEEEEECTT--TCCEEEEECCEETTEECCEEEEEECSSSSEEEEEETTT--EEEEEE
T ss_pred CCCCCEEEEEeccccCCCC---CCEEEEEeCC--CCcEEEEEecccCCCCCCCceEEEecCCCcEEEEECCC--CEEEEe
Confidence 468899888 322 2568899987 666654321 000 1111123444457 8899876432 45566
Q ss_pred ecCCCcceeec-cCccccCCCCCCCCcceEE-EeeCCcEEEEEcC-----------------ceeEeeCCCCeEE
Q 039705 178 LKEGKRIIYDL-PILNETTNPSENNLYPFVF-LSTDGNLFIFAND-----------------RSILLNPETNEIL 233 (539)
Q Consensus 178 P~~~~~~w~~~-~~l~~~~~~~~~~~yp~~~-~~~~G~Iyv~Gg~-----------------~~e~yDp~tn~W~ 233 (539)
+. + +.... ..... .. ....|..+ .-++|+||+.... ...+||+. ++..
T Consensus 99 ~~-g--~~~~~~~~~~~---~~-~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~ 165 (314)
T 1pjx_A 99 TD-G--TFEEIAKKDSE---GR-RMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMI 165 (314)
T ss_dssp TT-S--CEEECCSBCTT---SC-BCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEE
T ss_pred CC-C--CEEEEEeccCC---Cc-cccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEE
Confidence 54 4 33221 10000 00 01123333 3468999987642 36778877 5544
No 160
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=94.70 E-value=3.4 Score=45.17 Aligned_cols=138 Identities=15% Similarity=0.130 Sum_probs=73.4
Q ss_pred eEEEEECCCCCEEeCccCCCcccccceecCCCcEEEecCCCCCCCeEEEEeCCCCccceeecccccc-cccccceeEEcc
Q 039705 81 LAVEYDAESAAIRPLKILTDTWSSSGGLSANGTIVISGGWSSRGRSVRYLSGCYHACYWKEHHWELS-AKRWFSTQHILP 159 (539)
Q Consensus 81 ~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydP~~~t~~W~~~~~~m~-~~R~y~s~~~L~ 159 (539)
...+||..+++-...-..|..........++|+.+++|+.+ ..+++||... .+.+..... .. ...+-.+.+..+
T Consensus 453 ~v~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D---~~i~iwd~~~-~~~~~~~~~-~~~h~~~v~~~~~~~ 527 (694)
T 3dm0_A 453 ELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRD---RTIKLWNTLG-ECKYTISEG-GEGHRDWVSCVRFSP 527 (694)
T ss_dssp EEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETT---SCEEEECTTS-CEEEEECSS-TTSCSSCEEEEEECS
T ss_pred cEEEEECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCC---CEEEEEECCC-CcceeeccC-CCCCCCcEEEEEEeC
Confidence 46789988775543322333222233456799999998863 6789999751 233322211 11 112222333344
Q ss_pred CC--cEEEEcCccCCeEEEE-ecCCCcceeeccCccccCCCCCCCCcceEEEeeCCcEEEEEcC--ceeEeeCCCCeEE
Q 039705 160 DG--SFIVVGGRREFSYEYI-LKEGKRIIYDLPILNETTNPSENNLYPFVFLSTDGNLFIFAND--RSILLNPETNEIL 233 (539)
Q Consensus 160 dG--~VyvvGG~~~~~~E~y-P~~~~~~w~~~~~l~~~~~~~~~~~yp~~~~~~~G~Iyv~Gg~--~~e~yDp~tn~W~ 233 (539)
++ ..++.|+.+ .++.+| ..+. +-. ..+..... . --.+...++|++++.|+. .+.+||..+.+-.
T Consensus 528 ~~~~~~l~s~s~d-~~v~vwd~~~~--~~~--~~~~~h~~----~-v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~~~ 596 (694)
T 3dm0_A 528 NTLQPTIVSASWD-KTVKVWNLSNC--KLR--STLAGHTG----Y-VSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKL 596 (694)
T ss_dssp CSSSCEEEEEETT-SCEEEEETTTC--CEE--EEECCCSS----C-EEEEEECTTSSEEEEEETTSBCEEEETTTTEEE
T ss_pred CCCcceEEEEeCC-CeEEEEECCCC--cEE--EEEcCCCC----C-EEEEEEeCCCCEEEEEeCCCeEEEEECCCCceE
Confidence 54 456666654 456777 4332 211 11111110 0 112234578999999885 4788999888644
No 161
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=94.61 E-value=1.3 Score=43.89 Aligned_cols=140 Identities=14% Similarity=0.110 Sum_probs=68.9
Q ss_pred EEEEECCCCC------EEeCccCC----Ccccccceec----CCCcE-EEecCCCCCCCeEEEEeCCCCc------cc--
Q 039705 82 AVEYDAESAA------IRPLKILT----DTWSSSGGLS----ANGTI-VISGGWSSRGRSVRYLSGCYHA------CY-- 138 (539)
Q Consensus 82 ~~~yDp~t~~------w~~l~~~~----~~~c~~~~~l----~dG~l-~v~GG~~~g~~~v~~ydP~~~t------~~-- 138 (539)
..+||..+++ +..+.... .......... +++.. +++|+.. ..+.+||.. + .+
T Consensus 93 i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~d---g~i~iwd~~--~~~~~~~~~~~ 167 (397)
T 1sq9_A 93 LLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVK---GTTYIWKFH--PFADESNSLTL 167 (397)
T ss_dssp EEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETT---SCEEEEEEE--SSSSHHHHTTT
T ss_pred EEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCC---CcEEEEeCC--cccccccccee
Confidence 5567776665 55554331 1222223445 68888 8888753 568888875 3 21
Q ss_pred -eeecccccc--------cccccceeEEccCCcEEEEcCccCCeEEEE-ecCCCccee-eccCcccc---CCCCCCCCcc
Q 039705 139 -WKEHHWELS--------AKRWFSTQHILPDGSFIVVGGRREFSYEYI-LKEGKRIIY-DLPILNET---TNPSENNLYP 204 (539)
Q Consensus 139 -W~~~~~~m~--------~~R~y~s~~~L~dG~VyvvGG~~~~~~E~y-P~~~~~~w~-~~~~l~~~---~~~~~~~~yp 204 (539)
|..... +. ....-.+.+..++| .+++|+.+ ..+.+| ..+. +.. ........ .. . --
T Consensus 168 ~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~d-g~i~i~d~~~~--~~~~~~~~~~~h~~~~~----~-i~ 237 (397)
T 1sq9_A 168 NWSPTLE-LQGTVESPMTPSQFATSVDISERG-LIATGFNN-GTVQISELSTL--RPLYNFESQHSMINNSN----S-IR 237 (397)
T ss_dssp CCCCEEE-EEEEECCSSSSCCCCCEEEECTTS-EEEEECTT-SEEEEEETTTT--EEEEEEECCC---CCCC----C-EE
T ss_pred eccCcce-eeeeeccccCCCCCceEEEECCCc-eEEEEeCC-CcEEEEECCCC--ceeEEEeccccccccCC----c-cc
Confidence 221111 21 12222345556678 77777755 456677 4432 221 11110000 00 0 00
Q ss_pred eEEEeeCCcEEEEEcCc-----eeEeeCCCCeEEEEc
Q 039705 205 FVFLSTDGNLFIFANDR-----SILLNPETNEILHVF 236 (539)
Q Consensus 205 ~~~~~~~G~Iyv~Gg~~-----~e~yDp~tn~W~~~~ 236 (539)
.....++|++++.|+.+ +.+||..+.+-...+
T Consensus 238 ~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~ 274 (397)
T 1sq9_A 238 SVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSL 274 (397)
T ss_dssp EEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEE
T ss_pred eEEECCCCCEEEEEecCCCCceEEEEECCCCccccee
Confidence 12334689988888753 678999887654333
No 162
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=94.58 E-value=5.4 Score=43.56 Aligned_cols=110 Identities=10% Similarity=-0.057 Sum_probs=62.9
Q ss_pred eEEEecCCCCEEEEEccc-cCCCCCccCCCcccccCCCccccccccceeEEEEECCCCCEEeCccCCCc-----------
Q 039705 34 MHIILFPNTNKAIMLDAV-SLGPSNVRLPVGIYRLNPGAWQKYVDYRALAVEYDAESAAIRPLKILTDT----------- 101 (539)
Q Consensus 34 ~~~~ll~~~gkv~~~g~~-~~~~~~~~~~~g~~~~~~~~~~g~~~~~~~~~~yDp~t~~w~~l~~~~~~----------- 101 (539)
...+.- +||+.+++... +.+. ......+||..+++.+.+...+..
T Consensus 40 ~~~~~S-pdG~~la~~~~~d~~~----------------------~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~ 96 (741)
T 2ecf_A 40 MKPKVA-PDGSRVTFLRGKDSDR----------------------NQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEE 96 (741)
T ss_dssp EEEEEC-TTSSEEEEEECCSSCT----------------------TEEEEEEEETTTCCEEEEECGGGTC----------
T ss_pred CCceEe-cCCCEEEEEeccCCCC----------------------cccEEEEEECCCCceeEccchhhcccccccccchh
Confidence 355565 89987777654 2110 012466788888887665432111
Q ss_pred -------------ccccceecCCCcEEEecCCCCCCCeEEEEeCCCCcc---ceeecccccccccccceeEEccCCcEEE
Q 039705 102 -------------WSSSGGLSANGTIVISGGWSSRGRSVRYLSGCYHAC---YWKEHHWELSAKRWFSTQHILPDGSFIV 165 (539)
Q Consensus 102 -------------~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydP~~~t~---~W~~~~~~m~~~R~y~s~~~L~dG~Vyv 165 (539)
....-+..+||+.++++.. ..++++|.. +. .-..+.. ....-...+.-+||+.++
T Consensus 97 ~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~----~~i~~~d~~--~~~~~~~~~l~~---~~~~~~~~~~SPDG~~la 167 (741)
T 2ecf_A 97 KARRERQRIAAMTGIVDYQWSPDAQRLLFPLG----GELYLYDLK--QEGKAAVRQLTH---GEGFATDAKLSPKGGFVS 167 (741)
T ss_dssp ----------CCEESCCCEECTTSSEEEEEET----TEEEEEESS--SCSTTSCCBCCC---SSSCEEEEEECTTSSEEE
T ss_pred hhhhhhhhhccccCcceeEECCCCCEEEEEeC----CcEEEEECC--CCCcceEEEccc---CCcccccccCCCCCCEEE
Confidence 1234466789998888764 679999987 54 3333321 112223345567898666
Q ss_pred EcCccCCeEEEE
Q 039705 166 VGGRREFSYEYI 177 (539)
Q Consensus 166 vGG~~~~~~E~y 177 (539)
.+.. ..+.++
T Consensus 168 ~~~~--~~i~~~ 177 (741)
T 2ecf_A 168 FIRG--RNLWVI 177 (741)
T ss_dssp EEET--TEEEEE
T ss_pred EEeC--CcEEEE
Confidence 6543 245555
No 163
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=94.55 E-value=4.8 Score=41.22 Aligned_cols=111 Identities=14% Similarity=-0.014 Sum_probs=57.5
Q ss_pred eecCCCcEEEecCCCCCCCeEEEEeCCCCccceeecccccccccccceeEEccCCc-EEEEcCccCCeEEEE-ecCCCcc
Q 039705 107 GLSANGTIVISGGWSSRGRSVRYLSGCYHACYWKEHHWELSAKRWFSTQHILPDGS-FIVVGGRREFSYEYI-LKEGKRI 184 (539)
Q Consensus 107 ~~l~dG~l~v~GG~~~g~~~v~~ydP~~~t~~W~~~~~~m~~~R~y~s~~~L~dG~-VyvvGG~~~~~~E~y-P~~~~~~ 184 (539)
++..+|+||++... ...+++||+. +.+-..... . .... . .+.-++|+ +|+........+.++ +... ..
T Consensus 137 a~d~~g~lyv~d~~---~~~I~~id~~--~g~~~~~~~-~-~~~~-~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~-~~ 206 (409)
T 3hrp_A 137 AAVGNNTVLAYQRD---DPRVRLISVD--DNKVTTVHP-G-FKGG-K-PAVTKDKQRVYSIGWEGTHTVYVYMKASG-WA 206 (409)
T ss_dssp EECSTTEEEEEETT---TTEEEEEETT--TTEEEEEEE-T-CCBC-B-CEECTTSSEEEEEBSSTTCEEEEEEGGGT-TC
T ss_pred EEeCCCCEEEEecC---CCcEEEEECC--CCEEEEeec-c-CCCC-c-eeEecCCCcEEEEecCCCceEEEEEcCCC-ce
Confidence 34478999998653 4689999998 555444332 1 1111 1 44555665 455443222255555 4432 11
Q ss_pred eeec-cCccccCCCCCCCCcceE-EEee-CCcEEEEEcC-ceeEeeCCCCeEE
Q 039705 185 IYDL-PILNETTNPSENNLYPFV-FLST-DGNLFIFAND-RSILLNPETNEIL 233 (539)
Q Consensus 185 w~~~-~~l~~~~~~~~~~~yp~~-~~~~-~G~Iyv~Gg~-~~e~yDp~tn~W~ 233 (539)
.... ...... ..+|+. .+.+ +|+||+.... .+.+||+.+....
T Consensus 207 ~~~~g~~~~~~------~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~ 253 (409)
T 3hrp_A 207 PTRIGQLGSTF------SGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVT 253 (409)
T ss_dssp EEEEEECCTTS------CSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEE
T ss_pred eEEeeeccchh------cCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEE
Confidence 1111 000000 112333 3445 7999995433 4788999887654
No 164
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=94.55 E-value=0.48 Score=46.27 Aligned_cols=103 Identities=10% Similarity=0.032 Sum_probs=56.9
Q ss_pred CcEEEecCCCCCCCeEEEEeCCCCccceeeccccccc-ccccceeEEccCCcEEEEcCccCCeEEEE-ecCCCcceeecc
Q 039705 112 GTIVISGGWSSRGRSVRYLSGCYHACYWKEHHWELSA-KRWFSTQHILPDGSFIVVGGRREFSYEYI-LKEGKRIIYDLP 189 (539)
Q Consensus 112 G~l~v~GG~~~g~~~v~~ydP~~~t~~W~~~~~~m~~-~R~y~s~~~L~dG~VyvvGG~~~~~~E~y-P~~~~~~w~~~~ 189 (539)
|+++++|+.+ ..+++||.. +........ +.. ...-.+++..+||+.+++|+.+ ..+.+| ..+. +....
T Consensus 54 g~~l~~~~~d---g~i~iw~~~--~~~~~~~~~-~~~h~~~v~~~~~~~~~~~l~s~~~d-g~v~iwd~~~~--~~~~~- 123 (368)
T 3mmy_A 54 GNFLIAGSWA---NDVRCWEVQ--DSGQTIPKA-QQMHTGPVLDVCWSDDGSKVFTASCD-KTAKMWDLSSN--QAIQI- 123 (368)
T ss_dssp SEEEEEEETT---SEEEEEEEC--TTSCEEEEE-EEECSSCEEEEEECTTSSEEEEEETT-SEEEEEETTTT--EEEEE-
T ss_pred ceEEEEECCC---CcEEEEEcC--CCCceeEEE-eccccCCEEEEEECcCCCEEEEEcCC-CcEEEEEcCCC--Cceee-
Confidence 6999998863 578999976 422221111 221 1112234455689888888765 356677 4433 22211
Q ss_pred CccccCCCCCCCCcceEEE---eeCCcEEEEEcC--ceeEeeCCCCeE
Q 039705 190 ILNETTNPSENNLYPFVFL---STDGNLFIFAND--RSILLNPETNEI 232 (539)
Q Consensus 190 ~l~~~~~~~~~~~yp~~~~---~~~G~Iyv~Gg~--~~e~yDp~tn~W 232 (539)
. .... . ...+. .++|++++.|+. .+.+||.++++-
T Consensus 124 -~-~~~~----~--v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~ 163 (368)
T 3mmy_A 124 -A-QHDA----P--VKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNP 163 (368)
T ss_dssp -E-ECSS----C--EEEEEEEECSSCEEEEEEETTSEEEEECSSCSSC
T ss_pred -c-cccC----c--eEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcE
Confidence 0 1100 0 11122 468888888874 477899887653
No 165
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=94.54 E-value=2.2 Score=42.81 Aligned_cols=232 Identities=9% Similarity=0.029 Sum_probs=105.6
Q ss_pred CCCcEEEecCCCCCCCeEEEEeCCCCcccee-eccccccccc-ccceeEEcc-CCcEEEEcCccCCeEEEE-ecCCCcce
Q 039705 110 ANGTIVISGGWSSRGRSVRYLSGCYHACYWK-EHHWELSAKR-WFSTQHILP-DGSFIVVGGRREFSYEYI-LKEGKRII 185 (539)
Q Consensus 110 ~dG~l~v~GG~~~g~~~v~~ydP~~~t~~W~-~~~~~m~~~R-~y~s~~~L~-dG~VyvvGG~~~~~~E~y-P~~~~~~w 185 (539)
++...+++.|..+ ..+.+||... ..... .... +.... .-.+.+..+ +++++++|+.+ .++.+| ..++ ..
T Consensus 44 ~~~~~~~~~~~~~--g~i~v~~~~~-~~~~~~~~~~-~~~h~~~V~~~~~~p~~~~~l~s~s~d-g~v~vw~~~~~--~~ 116 (402)
T 2aq5_A 44 PKFMALICEASGG--GAFLVLPLGK-TGRVDKNVPL-VCGHTAPVLDIAWCPHNDNVIASGSED-CTVMVWEIPDG--GL 116 (402)
T ss_dssp SSEEEEEBCCSSS--CCEEEEETTC-CEECCTTCCC-BCCCSSCEEEEEECTTCTTEEEEEETT-SEEEEEECCTT--CC
T ss_pred CCeEEEEEEEcCC--CEEEEEECcc-CCCCCCCCce-EecCCCCEEEEEeCCCCCCEEEEEeCC-CeEEEEEccCC--CC
Confidence 4444455433322 5688898751 22221 1111 22111 112333445 78899988866 456777 4332 11
Q ss_pred -----eeccCccccCCCCCCCCcceEEEeeCC-cEEEEEcC--ceeEeeCCCCeEEEEcccCCCCCCccCCCccEEeccc
Q 039705 186 -----YDLPILNETTNPSENNLYPFVFLSTDG-NLFIFAND--RSILLNPETNEILHVFPILRGGSRNYPASATSALLPI 257 (539)
Q Consensus 186 -----~~~~~l~~~~~~~~~~~yp~~~~~~~G-~Iyv~Gg~--~~e~yDp~tn~W~~~~p~mp~~~r~yp~~g~av~lpl 257 (539)
.....+..... . --.+...++| ++++.|+. .+.+||..+++....+.. .. .... .-.....
T Consensus 117 ~~~~~~~~~~~~~h~~----~-v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~-~~-~~~~--v~~~~~~-- 185 (402)
T 2aq5_A 117 VLPLREPVITLEGHTK----R-VGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGP-DV-HPDT--IYSVDWS-- 185 (402)
T ss_dssp SSCBCSCSEEEECCSS----C-EEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECT-TT-CCSC--EEEEEEC--
T ss_pred ccccCCceEEecCCCC----e-EEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEec-CC-CCCc--eEEEEEC--
Confidence 00111111100 0 0012234676 68888874 478899998876543310 11 0010 0111221
Q ss_pred ccCCCCCCCcccEEEEecCCCCCcccccCCCcccccCCceEEEEeeCCCCceeeeccCCCceeceeEEecCCcEEEEcCc
Q 039705 258 KLQDPNSNAIRAEVLICGGAKPEAGVLAGKGEFMNALQDCGRIEITNKSATWQREMMPSPRVMGEMLLLPTGDVLIINGA 337 (539)
Q Consensus 258 ~~~~~~~~~~~g~Iyv~GG~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~~M~~~R~~~~~vvlpdG~I~vvGG~ 337 (539)
.+++.+++|+.+. .+..+|+.......+.............+..+||+++++|..
T Consensus 186 ---------~~~~~l~~~~~d~----------------~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~ 240 (402)
T 2aq5_A 186 ---------RDGALICTSCRDK----------------RVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFS 240 (402)
T ss_dssp ---------TTSSCEEEEETTS----------------EEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTEEEEEEEC
T ss_pred ---------CCCCEEEEEecCC----------------cEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCcEEEEecc
Confidence 1677778877541 355677642111111111111111123456789999998832
Q ss_pred CCCCCCcccCCCCCCccEEEcCCCCCCCceEecCCCCCCccceeeEeeCCCCeEEE-ecCC
Q 039705 338 KKGTAGWNFATDPNTTPVLYEPDDPINERFSELTPTSKPRMCHSTSVVLPDGKILV-AGSN 397 (539)
Q Consensus 338 ~~g~~g~~~~~~~~~~~e~YdP~t~~g~~Wt~~a~~~~~R~yhs~a~llpdG~V~v-~GG~ 397 (539)
. ... .++.+||..+..- ..... .......- ....+.|||+.++ +|+.
T Consensus 241 ~-~~d---------~~i~iwd~~~~~~-~~~~~-~~~~~~~v-~~~~~s~~~~~l~~~g~~ 288 (402)
T 2aq5_A 241 R-MSE---------RQVALWDTKHLEE-PLSLQ-ELDTSSGV-LLPFFDPDTNIVYLCGKG 288 (402)
T ss_dssp T-TCC---------EEEEEEETTBCSS-CSEEE-ECCCCSSC-EEEEEETTTTEEEEEETT
T ss_pred C-CCC---------ceEEEEcCccccC-CceEE-eccCCCce-eEEEEcCCCCEEEEEEcC
Confidence 1 000 1688999887511 01111 11111111 2234568888764 5654
No 166
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=94.43 E-value=2.9 Score=41.04 Aligned_cols=134 Identities=10% Similarity=0.053 Sum_probs=66.1
Q ss_pred eEEEEECCCCCEEeCccCCCcccccceecCCCcEEEecCCCCCCCeEEEEeCCCCccceeecccccccccccceeEEccC
Q 039705 81 LAVEYDAESAAIRPLKILTDTWSSSGGLSANGTIVISGGWSSRGRSVRYLSGCYHACYWKEHHWELSAKRWFSTQHILPD 160 (539)
Q Consensus 81 ~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydP~~~t~~W~~~~~~m~~~R~y~s~~~L~d 160 (539)
...+||..+++....-..+.......+..+||+.+++||.. ..+++||.. ...-......-....+-.+...-++
T Consensus 99 ~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d---~~i~~wd~~--~~~~~~~~~~~~~~~~v~~~~~~~~ 173 (343)
T 2xzm_R 99 TLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAE---REIKLWNIL--GECKFSSAEKENHSDWVSCVRYSPI 173 (343)
T ss_dssp EEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETT---SCEEEEESS--SCEEEECCTTTSCSSCEEEEEECCC
T ss_pred cEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCC---CEEEEEecc--CCceeeeecccCCCceeeeeeeccc
Confidence 46789998876543222222222223456799999998863 578899875 3221111110011111112222223
Q ss_pred ----------CcEEEEcCccCCeEEEEecCCCcceeeccCccccCCCCCCCCcceEEEeeCCcEEEEEcCc--eeEeeCC
Q 039705 161 ----------GSFIVVGGRREFSYEYILKEGKRIIYDLPILNETTNPSENNLYPFVFLSTDGNLFIFANDR--SILLNPE 228 (539)
Q Consensus 161 ----------G~VyvvGG~~~~~~E~yP~~~~~~w~~~~~l~~~~~~~~~~~yp~~~~~~~G~Iyv~Gg~~--~e~yDp~ 228 (539)
+..++.|+.+ ..+.+|.... +-. .. +..... . --.+...++|+.++.|+.+ +.+||..
T Consensus 174 ~~~~~~~~~~~~~l~s~~~d-~~i~iwd~~~--~~~-~~-~~~h~~----~-v~~~~~s~~g~~l~sgs~dg~v~iwd~~ 243 (343)
T 2xzm_R 174 MKSANKVQPFAPYFASVGWD-GRLKVWNTNF--QIR-YT-FKAHES----N-VNHLSISPNGKYIATGGKDKKLLIWDIL 243 (343)
T ss_dssp CCSCSCCCSSCCEEEEEETT-SEEEEEETTT--EEE-EE-EECCSS----C-EEEEEECTTSSEEEEEETTCEEEEEESS
T ss_pred cccccccCCCCCEEEEEcCC-CEEEEEcCCC--cee-EE-EcCccc----c-ceEEEECCCCCEEEEEcCCCeEEEEECC
Confidence 3567777765 4556663221 111 00 111100 0 0012334799999998854 6788874
Q ss_pred C
Q 039705 229 T 229 (539)
Q Consensus 229 t 229 (539)
+
T Consensus 244 ~ 244 (343)
T 2xzm_R 244 N 244 (343)
T ss_dssp C
T ss_pred C
Confidence 3
No 167
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=94.42 E-value=3.3 Score=41.69 Aligned_cols=24 Identities=13% Similarity=0.214 Sum_probs=18.1
Q ss_pred eecCCCcEEEecCCCCCCCeEEEEeCC
Q 039705 107 GLSANGTIVISGGWSSRGRSVRYLSGC 133 (539)
Q Consensus 107 ~~l~dG~l~v~GG~~~g~~~v~~ydP~ 133 (539)
...+||.++++|+.. ..+++||..
T Consensus 35 ~~s~~g~~la~g~~d---g~v~iw~~~ 58 (447)
T 3dw8_B 35 EFNHSGELLATGDKG---GRVVIFQQE 58 (447)
T ss_dssp EECSSSSEEEEEETT---SEEEEEEEC
T ss_pred EECCCCCEEEEEcCC---CeEEEEEec
Confidence 345689999999863 578888865
No 168
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=94.38 E-value=3.5 Score=38.86 Aligned_cols=218 Identities=13% Similarity=0.119 Sum_probs=108.4
Q ss_pred eecCCCcEEEecCCCCCCCeEEEEeCCCCccceeecccccccc-cccceeEEccCCcEEEEcCccCCeEEEE-ecCCCcc
Q 039705 107 GLSANGTIVISGGWSSRGRSVRYLSGCYHACYWKEHHWELSAK-RWFSTQHILPDGSFIVVGGRREFSYEYI-LKEGKRI 184 (539)
Q Consensus 107 ~~l~dG~l~v~GG~~~g~~~v~~ydP~~~t~~W~~~~~~m~~~-R~y~s~~~L~dG~VyvvGG~~~~~~E~y-P~~~~~~ 184 (539)
+...+|+|++.... ...+.+||+. .++.... ++.. ..-.+.+.-.+|++|+....+ ..+.+| +. + +
T Consensus 26 ~~d~~g~l~v~~~~---~~~v~~~~~~---~~~~~~~--~~~~~~~~~~i~~~~~g~l~v~~~~~-~~v~~~d~~-g--~ 93 (300)
T 2qc5_A 26 TSSEDGKVWFTQHK---ANKISSLDQS---GRIKEFE--VPTPDAKVMCLIVSSLGDIWFTENGA-NKIGKLSKK-G--G 93 (300)
T ss_dssp EECTTSCEEEEETT---TTEEEEECTT---SCEEEEE--CSSTTCCEEEEEECTTSCEEEEETTT-TEEEEECTT-S--C
T ss_pred eECCCCCEEEEcCC---CCeEEEECCC---CceEEEE--CCCCCCcceeEEECCCCCEEEEecCC-CeEEEECCC-C--C
Confidence 34568999997632 3578889985 3333321 1111 111234444679999875432 345566 54 3 3
Q ss_pred eeeccCccccCCCCCCCCcceEEEe-eCCcEEEEEc--CceeEeeCCCCeEEEEcccCCCCCCccCCCccEEecccccCC
Q 039705 185 IYDLPILNETTNPSENNLYPFVFLS-TDGNLFIFAN--DRSILLNPETNEILHVFPILRGGSRNYPASATSALLPIKLQD 261 (539)
Q Consensus 185 w~~~~~l~~~~~~~~~~~yp~~~~~-~~G~Iyv~Gg--~~~e~yDp~tn~W~~~~p~mp~~~r~yp~~g~av~lpl~~~~ 261 (539)
....... .. ...|...+. ++|+||+... ..+.+||+. ++.. ... ++. .-..| ..+.+ .
T Consensus 94 ~~~~~~~-~~------~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~-~~~-~~~-~~~~~---~~i~~--d--- 154 (300)
T 2qc5_A 94 FTEYPLP-QP------DSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIY-EYD-LPN-KGSYP---AFITL--G--- 154 (300)
T ss_dssp EEEEECS-ST------TCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEE-EEE-CSS-TTCCE---EEEEE--C---
T ss_pred eEEecCC-CC------CCCCccceECCCCCEEEEccCCCeEEEECCC-CCEE-Ecc-CCC-CCCCc---eeEEE--C---
Confidence 3322111 00 113444443 5899999874 457889998 5554 221 221 11111 11211 1
Q ss_pred CCCCCcccEEEEecCCCCCcccccCCCcccccCCceEEEEeeCCCCceeeeccCCC-ceeceeEEecCCcEEEEcCcCCC
Q 039705 262 PNSNAIRAEVLICGGAKPEAGVLAGKGEFMNALQDCGRIEITNKSATWQREMMPSP-RVMGEMLLLPTGDVLIINGAKKG 340 (539)
Q Consensus 262 ~~~~~~~g~Iyv~GG~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~~M~~~-R~~~~~vvlpdG~I~vvGG~~~g 340 (539)
.+++||+..-.. ..+.+||+. .+.....++.. ..-.+.+.-++|+||+..-..
T Consensus 155 -----~~g~l~v~~~~~----------------~~i~~~~~~---g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~-- 208 (300)
T 2qc5_A 155 -----SDNALWFTENQN----------------NSIGRITNT---GKLEEYPLPTNAAAPVGITSGNDGALWFVEIMG-- 208 (300)
T ss_dssp -----TTSSEEEEETTT----------------TEEEEECTT---CCEEEEECSSTTCCEEEEEECTTSSEEEEETTT--
T ss_pred -----CCCCEEEEecCC----------------CeEEEECCC---CcEEEeeCCCCCCCcceEEECCCCCEEEEccCC--
Confidence 157788865321 134566652 33333222211 111233445689999965322
Q ss_pred CCCcccCCCCCCccEEEcCCCCCCCceEecCCCCCCccceeeEeeCCCCeEEEecCC
Q 039705 341 TAGWNFATDPNTTPVLYEPDDPINERFSELTPTSKPRMCHSTSVVLPDGKILVAGSN 397 (539)
Q Consensus 341 ~~g~~~~~~~~~~~e~YdP~t~~g~~Wt~~a~~~~~R~yhs~a~llpdG~V~v~GG~ 397 (539)
..+.+||+ +. ++...........-++ .++-++|+||++...
T Consensus 209 -----------~~i~~~~~-~g---~~~~~~~~~~~~~~~~-i~~d~~g~l~v~~~~ 249 (300)
T 2qc5_A 209 -----------NKIGRITT-TG---EISEYDIPTPNARPHA-ITAGKNSEIWFTEWG 249 (300)
T ss_dssp -----------TEEEEECT-TC---CEEEEECSSTTCCEEE-EEECSTTCEEEEETT
T ss_pred -----------CEEEEEcC-CC---cEEEEECCCCCCCceE-EEECCCCCEEEeccC
Confidence 14788998 55 5554321111111123 345689999998643
No 169
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=94.21 E-value=5.3 Score=40.36 Aligned_cols=101 Identities=11% Similarity=0.075 Sum_probs=59.8
Q ss_pred CcEEEecCCCCCCCeEEEEeCCCCccceeeccccccccc-ccceeEEccCCcEEEEcCccCCeEEEE-ecCCCcceeecc
Q 039705 112 GTIVISGGWSSRGRSVRYLSGCYHACYWKEHHWELSAKR-WFSTQHILPDGSFIVVGGRREFSYEYI-LKEGKRIIYDLP 189 (539)
Q Consensus 112 G~l~v~GG~~~g~~~v~~ydP~~~t~~W~~~~~~m~~~R-~y~s~~~L~dG~VyvvGG~~~~~~E~y-P~~~~~~w~~~~ 189 (539)
+.++++|-. ++|++||.. +.+...+-. +.... +-.+++.-+||+.+++|+.++ ++.+| ..+. +-..
T Consensus 116 ~n~lAvgld----~tV~lWd~~--tg~~~~~~~-~~~~~~~V~sv~fspdg~~lasgs~Dg-~v~iWd~~~~--~~~~-- 183 (420)
T 4gga_A 116 GNVLAVALD----NSVYLWSAS--SGDILQLLQ-MEQPGEYISSVAWIKEGNYLAVGTSSA-EVQLWDVQQQ--KRLR-- 183 (420)
T ss_dssp TSEEEEEET----TEEEEEETT--TCCEEEEEE-CCSTTCCEEEEEECTTSSEEEEEETTS-CEEEEETTTT--EEEE--
T ss_pred CCEEEEEeC----CEEEEEECC--CCCEEEEEE-ecCCCCcEEEEEECCCCCEEEEEECCC-eEEEEEcCCC--cEEE--
Confidence 457777742 689999998 666554332 33322 223445567999999988764 57777 4443 2211
Q ss_pred CccccCCCCCCCCcceEEEeeCCcEEEEEcCc--eeEeeCCCCe
Q 039705 190 ILNETTNPSENNLYPFVFLSTDGNLFIFANDR--SILLNPETNE 231 (539)
Q Consensus 190 ~l~~~~~~~~~~~yp~~~~~~~G~Iyv~Gg~~--~e~yDp~tn~ 231 (539)
.+.... -....+..++++++.|+.+ ..++|.....
T Consensus 184 ~~~~h~-------~~v~~~s~~~~~l~sgs~d~~i~~~d~~~~~ 220 (420)
T 4gga_A 184 NMTSHS-------ARVGSLSWNSYILSSGSRSGHIHHHDVRVAE 220 (420)
T ss_dssp EECCCS-------SCEEEEEEETTEEEEEETTSEEEEEETTSSS
T ss_pred EEeCCC-------CceEEEeeCCCEEEEEeCCCceeEeeecccc
Confidence 111110 1133566799999998864 5677776544
No 170
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=94.00 E-value=5.3 Score=39.55 Aligned_cols=62 Identities=15% Similarity=0.116 Sum_probs=38.8
Q ss_pred eEEecCCcEEEEcCcCCCCCCcccCCCCCCccEEEcCCCCCCCceEecCCCCCCcc---------------ce---eeEe
Q 039705 323 MLLLPTGDVLIINGAKKGTAGWNFATDPNTTPVLYEPDDPINERFSELTPTSKPRM---------------CH---STSV 384 (539)
Q Consensus 323 ~vvlpdG~I~vvGG~~~g~~g~~~~~~~~~~~e~YdP~t~~g~~Wt~~a~~~~~R~---------------yh---s~a~ 384 (539)
...-|||+.++.|+.+ + ++.+||.+++...++..+..+-.++. .+ ....
T Consensus 246 ~~~s~~~~~l~s~s~d-~------------~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 312 (355)
T 3vu4_A 246 MKWSTDGSKLAVVSDK-W------------TLHVFEIFNDQDNKRHALKGWINMKYFQSEWSLCNFKLSVDKHVRGCKIA 312 (355)
T ss_dssp EEECTTSCEEEEEETT-C------------EEEEEESSCCSCCCSEETTTTEECCCCCCSSCSEEEECCCCTTCCCCEEE
T ss_pred EEECCCCCEEEEEECC-C------------EEEEEEccCCCCcccccccceeeccccccccceeEEEeccCCCCCceEEE
Confidence 3456899999999865 2 57888887664445555433111110 01 3445
Q ss_pred eCCCCeEEEecCC
Q 039705 385 VLPDGKILVAGSN 397 (539)
Q Consensus 385 llpdG~V~v~GG~ 397 (539)
..+||+.+++|+.
T Consensus 313 ~~~d~~~l~~~~~ 325 (355)
T 3vu4_A 313 WISESSLVVVWPH 325 (355)
T ss_dssp ESSSSEEEEEETT
T ss_pred EeCCCCEEEEEeC
Confidence 6789999998886
No 171
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=93.33 E-value=6.6 Score=38.87 Aligned_cols=48 Identities=13% Similarity=0.045 Sum_probs=29.1
Q ss_pred EEEEECCCCCEEeCccC---CCcccccceecCCCcEEEecCCCCCCCeEEEEeCC
Q 039705 82 AVEYDAESAAIRPLKIL---TDTWSSSGGLSANGTIVISGGWSSRGRSVRYLSGC 133 (539)
Q Consensus 82 ~~~yDp~t~~w~~l~~~---~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydP~ 133 (539)
...+|+.+++.+.+... ....+...++.+||+.+.++... .+.+||..
T Consensus 18 ~~~~d~~~g~l~~~~~~~~~~~~~~~~~a~spdg~~l~~~~~~----~v~~~~~~ 68 (365)
T 1jof_A 18 TVQFDDEKLTCKLIKRTEIPQDEPISWMTFDHERKNIYGAAMK----KWSSFAVK 68 (365)
T ss_dssp EEEEETTTTEEEEEEEEECCTTCCCSEEEECTTSSEEEEEEBT----EEEEEEEE
T ss_pred EEEEECCCCCEEEeeEEccCCCCCCcEEEECCCCCEEEEEccc----eEEEEEEC
Confidence 44578888887765432 11234444567899866555432 78888863
No 172
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=93.29 E-value=7.3 Score=42.59 Aligned_cols=163 Identities=10% Similarity=0.079 Sum_probs=85.8
Q ss_pred CCCCEEEEEccccCCCCCccCCCcccccCCCccccccccceeEEEEECCCCCEEeCccCCCcccccceecCCCcEEEecC
Q 039705 40 PNTNKAIMLDAVSLGPSNVRLPVGIYRLNPGAWQKYVDYRALAVEYDAESAAIRPLKILTDTWSSSGGLSANGTIVISGG 119 (539)
Q Consensus 40 ~~~gkv~~~g~~~~~~~~~~~~~g~~~~~~~~~~g~~~~~~~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~l~v~GG 119 (539)
.+|||.+++.....|.. .....++|..+++...............+..+||+.++.+.
T Consensus 129 SPDG~~la~~~~~~G~~----------------------~~~i~v~dl~tg~~~~~~~~~~~~~~~~~wspDg~~l~~~~ 186 (695)
T 2bkl_A 129 SWDGKKVAFAQKPNAAD----------------------EAVLHVIDVDSGEWSKVDVIEGGKYATPKWTPDSKGFYYEW 186 (695)
T ss_dssp CTTSSEEEEEEEETTCS----------------------CCEEEEEETTTCCBCSSCCBSCCTTCCCEECTTSSEEEEEE
T ss_pred CCCCCEEEEEECCCCCc----------------------eEEEEEEECCCCCCcCCcccCcccccceEEecCCCEEEEEE
Confidence 38888888776432210 12467899999887511111222114556778999888776
Q ss_pred CCCC----------CCeEEEEeCCCCccce--eecccccc-cccccceeEEccCCcEEEEcCccC-CeEEEE-ecCCCcc
Q 039705 120 WSSR----------GRSVRYLSGCYHACYW--KEHHWELS-AKRWFSTQHILPDGSFIVVGGRRE-FSYEYI-LKEGKRI 184 (539)
Q Consensus 120 ~~~g----------~~~v~~ydP~~~t~~W--~~~~~~m~-~~R~y~s~~~L~dG~VyvvGG~~~-~~~E~y-P~~~~~~ 184 (539)
.... ...+++++.. +.+- ..+-. .. ...+..+...-+||+.+++...+. .+.++| -......
T Consensus 187 ~d~~~~~~~~~~~~~~~v~~~~l~--t~~~~~~lv~~-~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~ 263 (695)
T 2bkl_A 187 LPTDPSIKVDERPGYTTIRYHTLG--TEPSKDTVVHE-RTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKD 263 (695)
T ss_dssp CCCCTTSCGGGGGGGCEEEEEETT--SCGGGCEEEEC-CCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSS
T ss_pred ecCCCCCccccCCCCCEEEEEECC--CCchhceEEEe-cCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCc
Confidence 5321 2457888876 3331 11111 11 123445566677998777766554 456666 3221124
Q ss_pred eeeccCccccCCCCCCCCcceEEEeeCCcEEEEEc-----CceeEeeCCCCe---EEEEc
Q 039705 185 IYDLPILNETTNPSENNLYPFVFLSTDGNLFIFAN-----DRSILLNPETNE---ILHVF 236 (539)
Q Consensus 185 w~~~~~l~~~~~~~~~~~yp~~~~~~~G~Iyv~Gg-----~~~e~yDp~tn~---W~~~~ 236 (539)
+..+. ...+ ...+ .+.++|++|+..+ ....++|..+.. |...+
T Consensus 264 ~~~l~---~~~~---~~~~---~~~~~g~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~ 314 (695)
T 2bkl_A 264 FRLLV---KGVG---AKYE---VHAWKDRFYVLTDEGAPRQRVFEVDPAKPARASWKEIV 314 (695)
T ss_dssp CEEEE---ECSS---CCEE---EEEETTEEEEEECTTCTTCEEEEEBTTBCSGGGCEEEE
T ss_pred eEEee---cCCC---ceEE---EEecCCcEEEEECCCCCCCEEEEEeCCCCCccCCeEEe
Confidence 43221 1111 1122 2337788666665 235677876644 66333
No 173
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=93.16 E-value=4.9 Score=41.08 Aligned_cols=153 Identities=8% Similarity=0.018 Sum_probs=74.2
Q ss_pred eeEEccCCcEE-EEcCccCCeEEEE-ec--CCCcceeeccCccccCCCCCCCCcc-eEEEeeCCcEEEEEcCc--eeEee
Q 039705 154 TQHILPDGSFI-VVGGRREFSYEYI-LK--EGKRIIYDLPILNETTNPSENNLYP-FVFLSTDGNLFIFANDR--SILLN 226 (539)
Q Consensus 154 s~~~L~dG~Vy-vvGG~~~~~~E~y-P~--~~~~~w~~~~~l~~~~~~~~~~~yp-~~~~~~~G~Iyv~Gg~~--~e~yD 226 (539)
+++.-+||+.+ ++|+.+ .++.+| .. +. +.. ..+..... ...+ .+...++|+.+++|+.+ +..||
T Consensus 107 ~~~~s~d~~~l~~~~~~d-g~v~iwd~~~~~~--~~~--~~~~~~~~----~~~v~~~~~sp~~~~l~~~~~~g~v~~~~ 177 (450)
T 2vdu_B 107 NLRLTSDESRLIACADSD-KSLLVFDVDKTSK--NVL--KLRKRFCF----SKRPNAISIAEDDTTVIIADKFGDVYSID 177 (450)
T ss_dssp EEEECTTSSEEEEEEGGG-TEEEEEEECSSSS--SCE--EEEEEEEC----SSCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred EEEEcCCCCEEEEEECCC-CeEEEEECcCCCC--cee--eeeecccC----CCCceEEEEcCCCCEEEEEeCCCcEEEEe
Confidence 34455688885 666655 467777 44 22 221 11110000 0011 12334689988888764 55666
Q ss_pred CCCCeEEE-EcccCCCCCCccCCCccEEecccccCCCCCCCcc---cEEEEecCCCCCcccccCCCcccccCCceEEEEe
Q 039705 227 PETNEILH-VFPILRGGSRNYPASATSALLPIKLQDPNSNAIR---AEVLICGGAKPEAGVLAGKGEFMNALQDCGRIEI 302 (539)
Q Consensus 227 p~tn~W~~-~~p~mp~~~r~yp~~g~av~lpl~~~~~~~~~~~---g~Iyv~GG~~~~~~~~~~~~~~~~a~~s~~~~d~ 302 (539)
..+.+... ....+.+ . .+....+...| + ++++++|+.+ ..+..+|+
T Consensus 178 ~~~~~~~~~~~~~~~~-h-----~~~v~~~~~sp--------~~~~~~~l~s~~~d----------------~~i~vwd~ 227 (450)
T 2vdu_B 178 INSIPEEKFTQEPILG-H-----VSMLTDVHLIK--------DSDGHQFIITSDRD----------------EHIKISHY 227 (450)
T ss_dssp TTSCCCSSCCCCCSEE-C-----SSCEEEEEEEE--------CTTSCEEEEEEETT----------------SCEEEEEE
T ss_pred cCCcccccccceeeec-c-----cCceEEEEEcC--------CCCCCcEEEEEcCC----------------CcEEEEEC
Confidence 65543210 0001111 0 11111111111 5 7888888865 13566777
Q ss_pred eCCCCceeeecc--CCCceeceeEEecCCcEEEEcCcCCCCCCcccCCCCCCccEEEcCCCC
Q 039705 303 TNKSATWQREMM--PSPRVMGEMLLLPTGDVLIINGAKKGTAGWNFATDPNTTPVLYEPDDP 362 (539)
Q Consensus 303 ~~~~~~W~~~~M--~~~R~~~~~vvlpdG~I~vvGG~~~g~~g~~~~~~~~~~~e~YdP~t~ 362 (539)
.. .+....-+ ...... +.... ||+.++.|+.+ + ++.+||..+.
T Consensus 228 ~~--~~~~~~~~~~h~~~v~-~~~~s-d~~~l~s~~~d-~------------~v~vwd~~~~ 272 (450)
T 2vdu_B 228 PQ--CFIVDKWLFGHKHFVS-SICCG-KDYLLLSAGGD-D------------KIFAWDWKTG 272 (450)
T ss_dssp SC--TTCEEEECCCCSSCEE-EEEEC-STTEEEEEESS-S------------EEEEEETTTC
T ss_pred CC--CceeeeeecCCCCceE-EEEEC-CCCEEEEEeCC-C------------eEEEEECCCC
Confidence 53 22111111 122222 22334 99999999865 1 5788998876
No 174
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=92.46 E-value=4 Score=44.67 Aligned_cols=116 Identities=9% Similarity=-0.094 Sum_probs=61.9
Q ss_pred eecCCCcEEEecCCCCC---CCeEEEEeCCCCccceeeccccccc-c---------------c-------ccceeEEccC
Q 039705 107 GLSANGTIVISGGWSSR---GRSVRYLSGCYHACYWKEHHWELSA-K---------------R-------WFSTQHILPD 160 (539)
Q Consensus 107 ~~l~dG~l~v~GG~~~g---~~~v~~ydP~~~t~~W~~~~~~m~~-~---------------R-------~y~s~~~L~d 160 (539)
+..+||+.+++++..++ ...++++|.. +.+...+.. ... . | ...+.+.-+|
T Consensus 43 ~~SpdG~~la~~~~~d~~~~~~~i~~~d~~--~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~SpD 119 (741)
T 2ecf_A 43 KVAPDGSRVTFLRGKDSDRNQLDLWSYDIG--SGQTRLLVD-SKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQWSPD 119 (741)
T ss_dssp EECTTSSEEEEEECCSSCTTEEEEEEEETT--TCCEEEEEC-GGGTC--------------------CCEESCCCEECTT
T ss_pred eEecCCCEEEEEeccCCCCcccEEEEEECC--CCceeEccc-hhhcccccccccchhhhhhhhhhhccccCcceeEECCC
Confidence 44679998888765332 3478899987 655544322 110 0 1 1234455679
Q ss_pred CcEEEEcCccCCeEEEEecCCCcceeeccCccccCCCCCCCCcceEEEeeCCcEEEEE-cCceeEeeCCCCeEE
Q 039705 161 GSFIVVGGRREFSYEYILKEGKRIIYDLPILNETTNPSENNLYPFVFLSTDGNLFIFA-NDRSILLNPETNEIL 233 (539)
Q Consensus 161 G~VyvvGG~~~~~~E~yP~~~~~~w~~~~~l~~~~~~~~~~~yp~~~~~~~G~Iyv~G-g~~~e~yDp~tn~W~ 233 (539)
|+.++++.. ..+.+|............ +..... . --.....+||+..+++ +..+.++|..+++..
T Consensus 120 g~~l~~~~~--~~i~~~d~~~~~~~~~~~-l~~~~~----~-~~~~~~SPDG~~la~~~~~~i~~~d~~~g~~~ 185 (741)
T 2ecf_A 120 AQRLLFPLG--GELYLYDLKQEGKAAVRQ-LTHGEG----F-ATDAKLSPKGGFVSFIRGRNLWVIDLASGRQM 185 (741)
T ss_dssp SSEEEEEET--TEEEEEESSSCSTTSCCB-CCCSSS----C-EEEEEECTTSSEEEEEETTEEEEEETTTTEEE
T ss_pred CCEEEEEeC--CcEEEEECCCCCcceEEE-cccCCc----c-cccccCCCCCCEEEEEeCCcEEEEecCCCCEE
Confidence 987777654 455666332210000011 111000 0 1123456899865554 456889999988765
No 175
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=92.09 E-value=2.4 Score=41.21 Aligned_cols=107 Identities=9% Similarity=0.018 Sum_probs=61.0
Q ss_pred cceEEEe-eCCcEEEEEc----CceeEeeCCCCeEEEEcccCCCCCCccCCCccEEecccccCCCCCCCcccEEEEecCC
Q 039705 203 YPFVFLS-TDGNLFIFAN----DRSILLNPETNEILHVFPILRGGSRNYPASATSALLPIKLQDPNSNAIRAEVLICGGA 277 (539)
Q Consensus 203 yp~~~~~-~~G~Iyv~Gg----~~~e~yDp~tn~W~~~~p~mp~~~r~yp~~g~av~lpl~~~~~~~~~~~g~Iyv~GG~ 277 (539)
||+.... +||+||+..| ..+..+|+.+++..+.++ ++. +.+ +..+.+ .+++||+..-.
T Consensus 22 f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~-l~~--~~f---geGi~~-----------~g~~lyv~t~~ 84 (266)
T 2iwa_A 22 FTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHK-MDD--SYF---GEGLTL-----------LNEKLYQVVWL 84 (266)
T ss_dssp CEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEE-CCT--TCC---EEEEEE-----------ETTEEEEEETT
T ss_pred CcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEe-cCC--Ccc---eEEEEE-----------eCCEEEEEEec
Confidence 4555555 4599999876 358889999999875443 332 222 222221 26799998542
Q ss_pred CCCcccccCCCcccccCCceEEEEeeCCCCceeee-ccCCC-ceeceeEEecCC-cEEEEcCcCCCCCCcccCCCCCCcc
Q 039705 278 KPEAGVLAGKGEFMNALQDCGRIEITNKSATWQRE-MMPSP-RVMGEMLLLPTG-DVLIINGAKKGTAGWNFATDPNTTP 354 (539)
Q Consensus 278 ~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~-~M~~~-R~~~~~vvlpdG-~I~vvGG~~~g~~g~~~~~~~~~~~ 354 (539)
+ ..+..||+. +.+.. .++.+ -.. - .+.+|| ++|+..|.+ ++
T Consensus 85 ~----------------~~v~viD~~----t~~v~~~i~~g~~~g-~-glt~Dg~~l~vs~gs~--------------~l 128 (266)
T 2iwa_A 85 K----------------NIGFIYDRR----TLSNIKNFTHQMKDG-W-GLATDGKILYGSDGTS--------------IL 128 (266)
T ss_dssp C----------------SEEEEEETT----TTEEEEEEECCSSSC-C-EEEECSSSEEEECSSS--------------EE
T ss_pred C----------------CEEEEEECC----CCcEEEEEECCCCCe-E-EEEECCCEEEEECCCC--------------eE
Confidence 2 346778863 22322 22222 111 1 233465 577766522 57
Q ss_pred EEEcCCCC
Q 039705 355 VLYEPDDP 362 (539)
Q Consensus 355 e~YdP~t~ 362 (539)
...||++.
T Consensus 129 ~viD~~t~ 136 (266)
T 2iwa_A 129 YEIDPHTF 136 (266)
T ss_dssp EEECTTTC
T ss_pred EEEECCCC
Confidence 88999887
No 176
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=92.05 E-value=5.9 Score=42.00 Aligned_cols=50 Identities=14% Similarity=0.264 Sum_probs=31.4
Q ss_pred EecCCcEEEEcCcCCCCCCcccCCCCCCccEEEcCCCCCCCceEecCCCCCCccceeeEeeCCCCeEEEecCCC
Q 039705 325 LLPTGDVLIINGAKKGTAGWNFATDPNTTPVLYEPDDPINERFSELTPTSKPRMCHSTSVVLPDGKILVAGSNP 398 (539)
Q Consensus 325 vlpdG~I~vvGG~~~g~~g~~~~~~~~~~~e~YdP~t~~g~~Wt~~a~~~~~R~yhs~a~llpdG~V~v~GG~~ 398 (539)
..|||++++.+..+ + +..+|+. . +.... .. ...++.+.- ||++++.++..
T Consensus 253 ~spdg~~~~~~~~~-g------------~~~l~~~--g---~~~~~---~~-~~v~~~~~s--dg~~l~~~s~~ 302 (582)
T 3o4h_A 253 YLPDGRLAVVARRE-G------------RSAVFID--G---ERVEA---PQ-GNHGRVVLW--RGKLVTSHTSL 302 (582)
T ss_dssp ECTTSCEEEEEEET-T------------EEEEEET--T---EEECC---CS-SEEEEEEEE--TTEEEEEEEET
T ss_pred EcCCCcEEEEEEcC-C------------cEEEEEE--C---Ceecc---CC-CceEEEEec--CCEEEEEEcCC
Confidence 57999998877654 2 4678887 4 44431 11 223344443 99999887754
No 177
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=91.95 E-value=5 Score=38.80 Aligned_cols=84 Identities=8% Similarity=0.009 Sum_probs=46.1
Q ss_pred EEEEECCCCCEEeCccCCCcccccceecCCCcEEEecCCC-CCCCeEEEEeCCCCccceee-cccccccccccceeEEcc
Q 039705 82 AVEYDAESAAIRPLKILTDTWSSSGGLSANGTIVISGGWS-SRGRSVRYLSGCYHACYWKE-HHWELSAKRWFSTQHILP 159 (539)
Q Consensus 82 ~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~l~v~GG~~-~g~~~v~~ydP~~~t~~W~~-~~~~m~~~R~y~s~~~L~ 159 (539)
..+||+.+++++.+.........+-+...||++++..... .....+.+||+. +..... +.. ......-...+.-+
T Consensus 68 i~~~d~~~~~~~~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~--~~~~~~~~~~-~~~~~~~~~i~~d~ 144 (333)
T 2dg1_A 68 IFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATEN--GDNLQDIIED-LSTAYCIDDMVFDS 144 (333)
T ss_dssp EEEECTTTCCEEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTT--SCSCEEEECS-SSSCCCEEEEEECT
T ss_pred EEEEeCCCCcEEEEeeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCC--CCEEEEEEcc-CccCCcccceEECC
Confidence 5578888888776542221122223345789998875422 112578899997 554432 111 11112222345556
Q ss_pred CCcEEEEcC
Q 039705 160 DGSFIVVGG 168 (539)
Q Consensus 160 dG~VyvvGG 168 (539)
||++|+...
T Consensus 145 ~g~l~v~~~ 153 (333)
T 2dg1_A 145 KGGFYFTDF 153 (333)
T ss_dssp TSCEEEEEC
T ss_pred CCCEEEEec
Confidence 899998654
No 178
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=91.15 E-value=10 Score=38.41 Aligned_cols=113 Identities=8% Similarity=-0.064 Sum_probs=55.5
Q ss_pred eecCC-CcEEEecCCCCCCCeEEEEeCCCCc--------cceeeccccccccc-ccceeEEccCCc-EEEEcCccCCeEE
Q 039705 107 GLSAN-GTIVISGGWSSRGRSVRYLSGCYHA--------CYWKEHHWELSAKR-WFSTQHILPDGS-FIVVGGRREFSYE 175 (539)
Q Consensus 107 ~~l~d-G~l~v~GG~~~g~~~v~~ydP~~~t--------~~W~~~~~~m~~~R-~y~s~~~L~dG~-VyvvGG~~~~~~E 175 (539)
.+.++ +.++++|+.. ..+.+||.. + ........ +.... .-.+.+..++++ ++++|+.++ .+.
T Consensus 135 ~~~p~~~~~lat~~~d---g~V~vwd~~--~~~~~~~~~~~~~~~~~-~~~h~~~v~~l~~~~~~~~~l~s~~~dg-~i~ 207 (430)
T 2xyi_A 135 RYMPQNACVIATKTPS---SDVLVFDYT--KHPSKPEPSGECQPDLR-LRGHQKEGYGLSWNPNLNGYLLSASDDH-TIC 207 (430)
T ss_dssp EEETTEEEEEEEECSS---SCEEEEEGG--GSCSSCCTTCCCCCSEE-EECCSSCCCCEEECTTSTTEEEEECTTS-CEE
T ss_pred EECCCCCcEEEEECCC---CcEEEEECC--CcccccCccccCCCcEE-ecCCCCCeEEEEeCCCCCCeEEEEeCCC-eEE
Confidence 34555 6788888753 468889865 2 11222221 22111 112344555677 888887654 466
Q ss_pred EE-ecCCC-cceeeccCccccCCCCCCCCcceEE-Eee-CCcEEEEEcC--ceeEeeCCCC
Q 039705 176 YI-LKEGK-RIIYDLPILNETTNPSENNLYPFVF-LST-DGNLFIFAND--RSILLNPETN 230 (539)
Q Consensus 176 ~y-P~~~~-~~w~~~~~l~~~~~~~~~~~yp~~~-~~~-~G~Iyv~Gg~--~~e~yDp~tn 230 (539)
+| ..... ..+...+..... .. ......+ ..+ ++++|+.++. .+.+||.++.
T Consensus 208 vwd~~~~~~~~~~~~~~~~~~-~h---~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~ 264 (430)
T 2xyi_A 208 LWDINATPKEHRVIDAKNIFT-GH---TAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNN 264 (430)
T ss_dssp EEETTSCCBGGGEEECSEEEC-CC---SSCEEEEEECSSCTTEEEEEETTSEEEEEETTCS
T ss_pred EEeCCCCCCCCceeccceeec-CC---CCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCC
Confidence 67 33310 112111110000 00 0011122 234 6788888864 4778998865
No 179
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=91.13 E-value=6.9 Score=39.82 Aligned_cols=136 Identities=9% Similarity=0.058 Sum_probs=75.4
Q ss_pred eEEEEECCCCCEEeCccCCCcccccceecCCCcEEEecCCCCCCCeEEEEeCCCCccceeecccccccccccceeEEccC
Q 039705 81 LAVEYDAESAAIRPLKILTDTWSSSGGLSANGTIVISGGWSSRGRSVRYLSGCYHACYWKEHHWELSAKRWFSTQHILPD 160 (539)
Q Consensus 81 ~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydP~~~t~~W~~~~~~m~~~R~y~s~~~L~d 160 (539)
...+||+.+++.+.+..... .....+..+||+.+++.+..++...+.++|.. +.+...+.. ......+.+.-+|
T Consensus 204 ~i~~~d~~tg~~~~l~~~~~-~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~--~~~~~~l~~---~~~~~~~~~~spd 277 (415)
T 2hqs_A 204 ALVIQTLANGAVRQVASFPR-HNGAPAFSPDGSKLAFALSKTGSLNLYVMDLA--SGQIRQVTD---GRSNNTEPTWFPD 277 (415)
T ss_dssp EEEEEETTTCCEEEEECCSS-CEEEEEECTTSSEEEEEECTTSSCEEEEEETT--TCCEEECCC---CSSCEEEEEECTT
T ss_pred EEEEEECCCCcEEEeecCCC-cccCEEEcCCCCEEEEEEecCCCceEEEEECC--CCCEEeCcC---CCCcccceEECCC
Confidence 46789999988876543322 22334567899976644433455779999987 665544432 1112223444568
Q ss_pred CcEEEEcCccCC--eEEEE-ecCCCcceeeccCccccCCCCCCCCcc-eEEEeeCCcEEEEEcC-----ceeEeeCCCCe
Q 039705 161 GSFIVVGGRREF--SYEYI-LKEGKRIIYDLPILNETTNPSENNLYP-FVFLSTDGNLFIFAND-----RSILLNPETNE 231 (539)
Q Consensus 161 G~VyvvGG~~~~--~~E~y-P~~~~~~w~~~~~l~~~~~~~~~~~yp-~~~~~~~G~Iyv~Gg~-----~~e~yDp~tn~ 231 (539)
|+.++++..... .+.++ ..+. +...+.. . ..+. .....+||+.++++.. ...+||..+++
T Consensus 278 g~~l~~~s~~~g~~~i~~~d~~~~--~~~~l~~---~------~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~ 346 (415)
T 2hqs_A 278 SQNLAFTSDQAGRPQVYKVNINGG--APQRITW---E------GSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGG 346 (415)
T ss_dssp SSEEEEEECTTSSCEEEEEETTSS--CCEECCC---S------SSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCC
T ss_pred CCEEEEEECCCCCcEEEEEECCCC--CEEEEec---C------CCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCC
Confidence 986666554322 34444 3322 2111110 0 0111 2234579987766552 47789999888
Q ss_pred EE
Q 039705 232 IL 233 (539)
Q Consensus 232 W~ 233 (539)
..
T Consensus 347 ~~ 348 (415)
T 2hqs_A 347 VQ 348 (415)
T ss_dssp EE
T ss_pred EE
Confidence 75
No 180
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=91.12 E-value=1.7 Score=42.55 Aligned_cols=99 Identities=12% Similarity=0.052 Sum_probs=57.3
Q ss_pred ccEEEEecCCCCCcccccCCCcccccCCceEEEEeeCCCCceeee-ccC--CCceeceeEEecCCcEEEEcCcCCCCCCc
Q 039705 268 RAEVLICGGAKPEAGVLAGKGEFMNALQDCGRIEITNKSATWQRE-MMP--SPRVMGEMLLLPTGDVLIINGAKKGTAGW 344 (539)
Q Consensus 268 ~g~Iyv~GG~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~-~M~--~~R~~~~~vvlpdG~I~vvGG~~~g~~g~ 344 (539)
+++.++.|+.+. ++..+|+......++.. .+. ..... +...-||+++++.|+.+ +
T Consensus 118 ~g~~las~s~D~----------------~v~iwd~~~~~~~~~~~~~~~~h~~~v~-~v~~~p~~~~l~s~s~D-~---- 175 (330)
T 2hes_X 118 DGYYLATCSRDK----------------SVWIWETDESGEEYECISVLQEHSQDVK-HVIWHPSEALLASSSYD-D---- 175 (330)
T ss_dssp TSCEEEEEETTS----------------CEEEEECCTTCCCCEEEEEECCCSSCEE-EEEECSSSSEEEEEETT-S----
T ss_pred CCCEEEEEeCCC----------------EEEEEeccCCCCCeEEEEEeccCCCceE-EEEECCCCCEEEEEcCC-C----
Confidence 678888888652 35567764323345443 332 22222 22346899999999876 2
Q ss_pred ccCCCCCCccEEEcCCCCCCCceEecCCCCCCccceeeEeeCCC--CeEEEecCCCC
Q 039705 345 NFATDPNTTPVLYEPDDPINERFSELTPTSKPRMCHSTSVVLPD--GKILVAGSNPH 399 (539)
Q Consensus 345 ~~~~~~~~~~e~YdP~t~~g~~Wt~~a~~~~~R~yhs~a~llpd--G~V~v~GG~~~ 399 (539)
++.+||..+. .|+.+..+..-...-....+.|+ +..++.|+.+.
T Consensus 176 --------~i~iW~~~~~---~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~ 221 (330)
T 2hes_X 176 --------TVRIWKDYDD---DWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDS 221 (330)
T ss_dssp --------CEEEEEEETT---EEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETTS
T ss_pred --------eEEEEECCCC---CeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCC
Confidence 5789998877 77654333211111112345677 77888888644
No 181
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=90.94 E-value=11 Score=35.74 Aligned_cols=137 Identities=15% Similarity=0.075 Sum_probs=74.1
Q ss_pred EEEEECCCCCEEeCccCC----CcccccceecCCCcEEEe----cCC----------CCCCCeEEEEeCCCCccceeecc
Q 039705 82 AVEYDAESAAIRPLKILT----DTWSSSGGLSANGTIVIS----GGW----------SSRGRSVRYLSGCYHACYWKEHH 143 (539)
Q Consensus 82 ~~~yDp~t~~w~~l~~~~----~~~c~~~~~l~dG~l~v~----GG~----------~~g~~~v~~ydP~~~t~~W~~~~ 143 (539)
..+||+.+++.+.+.... ..+....++.++|++|++ |.. ..+...+..||+. .+.....
T Consensus 92 i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~---g~~~~~~ 168 (296)
T 3e5z_A 92 LERQREPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD---GTLSAPI 168 (296)
T ss_dssp EEEECSTTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT---SCEEEEE
T ss_pred EEEEcCCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC---CCEEEee
Confidence 567888888877653211 112234456789999997 431 0113478888885 2232222
Q ss_pred cccccccccceeEEccCCcEEEEcCccCCeEEEE-ecCCCcce-eeccCccccCCCCCCCCcceE-EEeeCCcEEEEEcC
Q 039705 144 WELSAKRWFSTQHILPDGSFIVVGGRREFSYEYI-LKEGKRII-YDLPILNETTNPSENNLYPFV-FLSTDGNLFIFAND 220 (539)
Q Consensus 144 ~~m~~~R~y~s~~~L~dG~VyvvGG~~~~~~E~y-P~~~~~~w-~~~~~l~~~~~~~~~~~yp~~-~~~~~G~Iyv~Gg~ 220 (539)
..+..+ .+.+.-+||+++ +.......+.+| ...+ .+. .....+ ... ..+|.. ..-.+|+||+..+.
T Consensus 169 ~~~~~~---~gi~~s~dg~~l-v~~~~~~~i~~~~~~~~-g~~~~~~~~~-~~~-----~~~p~~i~~d~~G~l~v~~~~ 237 (296)
T 3e5z_A 169 RDRVKP---NGLAFLPSGNLL-VSDTGDNATHRYCLNAR-GETEYQGVHF-TVE-----PGKTDGLRVDAGGLIWASAGD 237 (296)
T ss_dssp CCCSSE---EEEEECTTSCEE-EEETTTTEEEEEEECSS-SCEEEEEEEE-CCS-----SSCCCSEEEBTTSCEEEEETT
T ss_pred cCCCCC---ccEEECCCCCEE-EEeCCCCeEEEEEECCC-CcCcCCCeEe-eCC-----CCCCCeEEECCCCCEEEEcCC
Confidence 112222 234555689988 555444567777 4321 122 111111 100 112333 34478999999877
Q ss_pred ceeEeeCCCCeE
Q 039705 221 RSILLNPETNEI 232 (539)
Q Consensus 221 ~~e~yDp~tn~W 232 (539)
.+.+||+.....
T Consensus 238 ~v~~~~~~g~~~ 249 (296)
T 3e5z_A 238 GVHVLTPDGDEL 249 (296)
T ss_dssp EEEEECTTSCEE
T ss_pred eEEEECCCCCEE
Confidence 789999985543
No 182
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=90.85 E-value=20 Score=38.55 Aligned_cols=88 Identities=13% Similarity=0.037 Sum_probs=49.7
Q ss_pred eEEEEECCCCCEEe-CccCCCcccccceecCCCcEEEecCCCCCCCeEEEEeCCCCccceeecccccccccccceeEEcc
Q 039705 81 LAVEYDAESAAIRP-LKILTDTWSSSGGLSANGTIVISGGWSSRGRSVRYLSGCYHACYWKEHHWELSAKRWFSTQHILP 159 (539)
Q Consensus 81 ~~~~yDp~t~~w~~-l~~~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydP~~~t~~W~~~~~~m~~~R~y~s~~~L~ 159 (539)
...++|+.|++... ++...... +.++.+||+.+.+++. ...+.+||.. ..+-..+.. +..+.. +....+.
T Consensus 178 ~V~viD~~t~~v~~~i~~g~~p~--~v~~SpDGr~lyv~~~---dg~V~viD~~--~~t~~~v~~-i~~G~~-P~~ia~s 248 (567)
T 1qks_A 178 QIALIDGSTYEIKTVLDTGYAVH--ISRLSASGRYLFVIGR---DGKVNMIDLW--MKEPTTVAE-IKIGSE-ARSIETS 248 (567)
T ss_dssp EEEEEETTTCCEEEEEECSSCEE--EEEECTTSCEEEEEET---TSEEEEEETT--SSSCCEEEE-EECCSE-EEEEEEC
T ss_pred eEEEEECCCCeEEEEEeCCCCcc--ceEECCCCCEEEEEcC---CCeEEEEECC--CCCCcEeEE-EecCCC-CceeEEc
Confidence 46789999887653 33322222 3456789886555553 2479999984 122223332 433321 2233343
Q ss_pred -----CCcEEEEcCccCCeEEEE
Q 039705 160 -----DGSFIVVGGRREFSYEYI 177 (539)
Q Consensus 160 -----dG~VyvvGG~~~~~~E~y 177 (539)
||+.+.++.....++.++
T Consensus 249 ~~~~pDGk~l~v~n~~~~~v~Vi 271 (567)
T 1qks_A 249 KMEGWEDKYAIAGAYWPPQYVIM 271 (567)
T ss_dssp CSTTCTTTEEEEEEEETTEEEEE
T ss_pred cccCCCCCEEEEEEccCCeEEEE
Confidence 898777777666666676
No 183
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=90.74 E-value=11 Score=35.61 Aligned_cols=78 Identities=13% Similarity=0.149 Sum_probs=44.7
Q ss_pred EEEEECCCCCEEeCccCCCcccccceecCCCcEEEecCCCCCCCeEEEEeCCCCccceeecccccccc--cccceeEEcc
Q 039705 82 AVEYDAESAAIRPLKILTDTWSSSGGLSANGTIVISGGWSSRGRSVRYLSGCYHACYWKEHHWELSAK--RWFSTQHILP 159 (539)
Q Consensus 82 ~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydP~~~t~~W~~~~~~m~~~--R~y~s~~~L~ 159 (539)
..+||+.++ .+.+.... ....+-+...||++++.... ...+.+||+. +.+...+....... ..-...+.-+
T Consensus 52 i~~~~~~~~-~~~~~~~~-~~~~~l~~~~dg~l~v~~~~---~~~i~~~d~~--~g~~~~~~~~~~~~~~~~~~~i~~d~ 124 (296)
T 3e5z_A 52 TWAWSDDGQ-LSPEMHPS-HHQNGHCLNKQGHLIACSHG---LRRLERQREP--GGEWESIADSFEGKKLNSPNDVCLAP 124 (296)
T ss_dssp EEEEETTSC-EEEEESSC-SSEEEEEECTTCCEEEEETT---TTEEEEECST--TCCEEEEECEETTEECCCCCCEEECT
T ss_pred EEEEECCCC-eEEEECCC-CCcceeeECCCCcEEEEecC---CCeEEEEcCC--CCcEEEEeeccCCCCCCCCCCEEECC
Confidence 457888887 55543221 11222344578999887532 3678999997 56655443201111 1122455667
Q ss_pred CCcEEEE
Q 039705 160 DGSFIVV 166 (539)
Q Consensus 160 dG~Vyvv 166 (539)
||++|+.
T Consensus 125 ~G~l~vt 131 (296)
T 3e5z_A 125 DGSLWFS 131 (296)
T ss_dssp TSCEEEE
T ss_pred CCCEEEE
Confidence 8999997
No 184
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=90.52 E-value=15 Score=39.75 Aligned_cols=57 Identities=14% Similarity=0.181 Sum_probs=31.5
Q ss_pred EEec--CCcEEEEcCcCCCCCCcccCCCCCCccEEEcCCCCCCCceEecCCCCCCccceeeEeeCCCCeE-EEecC
Q 039705 324 LLLP--TGDVLIINGAKKGTAGWNFATDPNTTPVLYEPDDPINERFSELTPTSKPRMCHSTSVVLPDGKI-LVAGS 396 (539)
Q Consensus 324 vvlp--dG~I~vvGG~~~g~~g~~~~~~~~~~~e~YdP~t~~g~~Wt~~a~~~~~R~yhs~a~llpdG~V-~v~GG 396 (539)
...| ||++++++..+ +. ..+..+|.+.. ..+.+..-.... .+...+.|||+- ++++.
T Consensus 316 ~~sp~~dg~~l~~~~~~-g~----------~~l~~~~~~~~---~~~~l~~~~~~v--~~~~~~spdg~~l~~~~~ 375 (706)
T 2z3z_A 316 TFLPGSNNQFIWQSRRD-GW----------NHLYLYDTTGR---LIRQVTKGEWEV--TNFAGFDPKGTRLYFEST 375 (706)
T ss_dssp EECTTCSSEEEEEECTT-SS----------CEEEEEETTSC---EEEECCCSSSCE--EEEEEECTTSSEEEEEES
T ss_pred eeecCCCCEEEEEEccC-Cc----------cEEEEEECCCC---EEEecCCCCeEE--EeeeEEcCCCCEEEEEec
Confidence 4578 99987776543 21 24555665554 676664432211 222456789964 44444
No 185
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=90.45 E-value=8.9 Score=36.46 Aligned_cols=111 Identities=15% Similarity=0.084 Sum_probs=54.2
Q ss_pred cEEEecCCCCCCCeEEEEeCCCCccceeeccccccccc-ccceeEEccCCc-EEEEcCccCCeEEEE-ecCCCccee-ec
Q 039705 113 TIVISGGWSSRGRSVRYLSGCYHACYWKEHHWELSAKR-WFSTQHILPDGS-FIVVGGRREFSYEYI-LKEGKRIIY-DL 188 (539)
Q Consensus 113 ~l~v~GG~~~g~~~v~~ydP~~~t~~W~~~~~~m~~~R-~y~s~~~L~dG~-VyvvGG~~~~~~E~y-P~~~~~~w~-~~ 188 (539)
.++++++. ...+.+||+. +.+-...-. +.... .-...+.-+||+ +|+.+. ....+.+| ..+. +.. ..
T Consensus 2 ~~~v~~~~---~~~v~~~d~~--~~~~~~~~~-~~~~~~~~~~~~~s~dg~~l~v~~~-~~~~v~~~d~~~~--~~~~~~ 72 (337)
T 1pby_B 2 DYILAPAR---PDKLVVIDTE--KMAVDKVIT-IADAGPTPMVPMVAPGGRIAYATVN-KSESLVKIDLVTG--ETLGRI 72 (337)
T ss_dssp EEEEEEET---TTEEEEEETT--TTEEEEEEE-CTTCTTCCCCEEECTTSSEEEEEET-TTTEEEEEETTTC--CEEEEE
T ss_pred cEEEEcCC---CCeEEEEECC--CCcEEEEEE-cCCCCCCccceEEcCCCCEEEEEeC-CCCeEEEEECCCC--CeEeeE
Confidence 35566554 3678999987 544332111 22211 123455666885 555554 33456677 4443 221 12
Q ss_pred cCccccCCCCCCCCcc-eEEEeeCCc-EEEEE-------------cCceeEeeCCCCeEEEEc
Q 039705 189 PILNETTNPSENNLYP-FVFLSTDGN-LFIFA-------------NDRSILLNPETNEILHVF 236 (539)
Q Consensus 189 ~~l~~~~~~~~~~~yp-~~~~~~~G~-Iyv~G-------------g~~~e~yDp~tn~W~~~~ 236 (539)
+...... ....| .....+||+ ||+.. ...+.+||..+.+..+.+
T Consensus 73 ~~~~~~~----~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~ 131 (337)
T 1pby_B 73 DLSTPEE----RVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAF 131 (337)
T ss_dssp ECCBTTE----EEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEE
T ss_pred EcCCccc----ccccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEE
Confidence 1110000 00011 234557885 55542 256788999988765433
No 186
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=90.42 E-value=8.9 Score=37.61 Aligned_cols=49 Identities=8% Similarity=-0.135 Sum_probs=31.2
Q ss_pred EEEEECCCCCEEeCccCCCcccccceecCCCcEEEecCCCCCCCeEEEEeCC
Q 039705 82 AVEYDAESAAIRPLKILTDTWSSSGGLSANGTIVISGGWSSRGRSVRYLSGC 133 (539)
Q Consensus 82 ~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydP~ 133 (539)
..++|..+++.+.+..............+||+.+++.... ..+.++|..
T Consensus 62 l~~~d~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~---~~l~~~d~~ 110 (396)
T 3c5m_A 62 YYLLNLETQQAVQLTEGKGDNTFGGFISTDERAFFYVKNE---LNLMKVDLE 110 (396)
T ss_dssp EEEEETTTTEEEECCCSSCBCTTTCEECTTSSEEEEEETT---TEEEEEETT
T ss_pred EEEEECCCCcEEEeecCCCCccccceECCCCCEEEEEEcC---CcEEEEECC
Confidence 4567998888877754432222223457899887776542 367788876
No 187
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=90.25 E-value=5.7 Score=37.94 Aligned_cols=106 Identities=12% Similarity=0.097 Sum_probs=62.8
Q ss_pred eEEEeeCCcEEEEEcC----ceeEeeCCCCeEEEEcccCCCCCCccCCCccEEecccccCCCCCCCcccEEEEecCCCCC
Q 039705 205 FVFLSTDGNLFIFAND----RSILLNPETNEILHVFPILRGGSRNYPASATSALLPIKLQDPNSNAIRAEVLICGGAKPE 280 (539)
Q Consensus 205 ~~~~~~~G~Iyv~Gg~----~~e~yDp~tn~W~~~~p~mp~~~r~yp~~g~av~lpl~~~~~~~~~~~g~Iyv~GG~~~~ 280 (539)
......++.||...|. .+..+|+++++..+.+ +++. +.+ |..+.+ .+++||+....+
T Consensus 24 qGL~~~~~~LyestG~~g~S~v~~vD~~tgkv~~~~-~l~~--~~f---geGi~~-----------~~~~ly~ltw~~-- 84 (243)
T 3mbr_X 24 EGLFYLRGHLYESTGETGRSSVRKVDLETGRILQRA-EVPP--PYF---GAGIVA-----------WRDRLIQLTWRN-- 84 (243)
T ss_dssp EEEEEETTEEEEEECCTTSCEEEEEETTTCCEEEEE-ECCT--TCC---EEEEEE-----------ETTEEEEEESSS--
T ss_pred ccEEEECCEEEEECCCCCCceEEEEECCCCCEEEEE-eCCC--Ccc---eeEEEE-----------eCCEEEEEEeeC--
Confidence 4455668899999885 4788999999987544 4443 222 332221 278999985432
Q ss_pred cccccCCCcccccCCceEEEEeeCCCCceeee-ccCCCceeceeEEecCCcEEEEcCcCCCCCCcccCCCCCCccEEEcC
Q 039705 281 AGVLAGKGEFMNALQDCGRIEITNKSATWQRE-MMPSPRVMGEMLLLPTGDVLIINGAKKGTAGWNFATDPNTTPVLYEP 359 (539)
Q Consensus 281 ~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~-~M~~~R~~~~~vvlpdG~I~vvGG~~~g~~g~~~~~~~~~~~e~YdP 359 (539)
..+..||+. +-+.. ..+.+-..-+ ++--++++|+..|.+ ++..+||
T Consensus 85 --------------~~v~v~D~~----tl~~~~ti~~~~~Gwg-lt~dg~~L~vSdgs~--------------~l~~iDp 131 (243)
T 3mbr_X 85 --------------HEGFVYDLA----TLTPRARFRYPGEGWA-LTSDDSHLYMSDGTA--------------VIRKLDP 131 (243)
T ss_dssp --------------SEEEEEETT----TTEEEEEEECSSCCCE-EEECSSCEEEECSSS--------------EEEEECT
T ss_pred --------------CEEEEEECC----cCcEEEEEeCCCCceE-EeeCCCEEEEECCCC--------------eEEEEeC
Confidence 346678863 23332 3333322222 333344577766622 5788999
Q ss_pred CCC
Q 039705 360 DDP 362 (539)
Q Consensus 360 ~t~ 362 (539)
++.
T Consensus 132 ~t~ 134 (243)
T 3mbr_X 132 DTL 134 (243)
T ss_dssp TTC
T ss_pred CCC
Confidence 997
No 188
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=89.99 E-value=12 Score=35.34 Aligned_cols=70 Identities=19% Similarity=0.141 Sum_probs=37.7
Q ss_pred EEccCCcEEEE-------cCccCCeEEEE-ecCCCcceeeccCccccCCCCCCCCcceEEEe-eC-CcEEEEEc-CceeE
Q 039705 156 HILPDGSFIVV-------GGRREFSYEYI-LKEGKRIIYDLPILNETTNPSENNLYPFVFLS-TD-GNLFIFAN-DRSIL 224 (539)
Q Consensus 156 ~~L~dG~Vyvv-------GG~~~~~~E~y-P~~~~~~w~~~~~l~~~~~~~~~~~yp~~~~~-~~-G~Iyv~Gg-~~~e~ 224 (539)
+.-.+|++|+. +.. ...+.+| +.++ ++...... .... ....|..++. ++ |+||+... ..+.+
T Consensus 24 ~~~~~g~l~~~~~~~~~~~~~-~~~i~~~d~~~g--~~~~~~~~-~~~~---~~~~~~~i~~~~~~g~l~v~~~~~~l~~ 96 (314)
T 1pjx_A 24 VFDKNGDFYIVAPEVEVNGKP-AGEILRIDLKTG--KKTVICKP-EVNG---YGGIPAGCQCDRDANQLFVADMRLGLLV 96 (314)
T ss_dssp EECTTSCEEEEETTCEETTEE-CCEEEEECTTTC--CEEEEECC-EETT---EECCEEEEEECSSSSEEEEEETTTEEEE
T ss_pred eECCCCCEEEEEeccccCCCC-CCEEEEEeCCCC--cEEEEEec-ccCC---CCCCCceEEEecCCCcEEEEECCCCEEE
Confidence 33368899988 322 2345666 5554 44322110 0000 0012333433 67 89999874 46888
Q ss_pred eeCCCCeEE
Q 039705 225 LNPETNEIL 233 (539)
Q Consensus 225 yDp~tn~W~ 233 (539)
||+. ++..
T Consensus 97 ~d~~-g~~~ 104 (314)
T 1pjx_A 97 VQTD-GTFE 104 (314)
T ss_dssp EETT-SCEE
T ss_pred EeCC-CCEE
Confidence 9998 7765
No 189
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=89.59 E-value=16 Score=35.68 Aligned_cols=54 Identities=11% Similarity=-0.099 Sum_probs=36.2
Q ss_pred eEEEEECCCCCEEeCccCCCcccccceecCCCcEEEecCCCCCCCeEEEEeCCCCccce
Q 039705 81 LAVEYDAESAAIRPLKILTDTWSSSGGLSANGTIVISGGWSSRGRSVRYLSGCYHACYW 139 (539)
Q Consensus 81 ~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydP~~~t~~W 139 (539)
...++|+.+++.+.+...+..........+||+.+++.... ..+.++|.. +.+-
T Consensus 61 ~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~~l~~~~~~---~~l~~~d~~--~g~~ 114 (388)
T 3pe7_A 61 NYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDDALFYVKDG---RNLMRVDLA--TLEE 114 (388)
T ss_dssp EEEEEETTTCEEEECCCSSCBCSSSCEECTTSSEEEEEETT---TEEEEEETT--TCCE
T ss_pred eEEEEeCCCCceEEeeeCCCCCccceEEcCCCCEEEEEeCC---CeEEEEECC--CCcc
Confidence 35578999998888875543322234567899877776532 578888987 5443
No 190
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=89.10 E-value=18 Score=35.36 Aligned_cols=142 Identities=12% Similarity=0.102 Sum_probs=73.6
Q ss_pred CCcEEEEEcC--ceeEeeCCCCeEEEEcccCCCCCCccCCCccEEecccccCCCCCCCcccEEEEecCCCCCcccccCCC
Q 039705 211 DGNLFIFAND--RSILLNPETNEILHVFPILRGGSRNYPASATSALLPIKLQDPNSNAIRAEVLICGGAKPEAGVLAGKG 288 (539)
Q Consensus 211 ~G~Iyv~Gg~--~~e~yDp~tn~W~~~~p~mp~~~r~yp~~g~av~lpl~~~~~~~~~~~g~Iyv~GG~~~~~~~~~~~~ 288 (539)
++++++.++. .+.+||..+.+....+ ..+. .. ......+.. .+++++++|+.+
T Consensus 111 ~~~~l~s~~~d~~i~iwd~~~~~~~~~~-~~~~--~~----~~~~~~~~~--------~~~~~~~~~~~~---------- 165 (408)
T 4a11_B 111 DTGMFTSSSFDKTLKVWDTNTLQTADVF-NFEE--TV----YSHHMSPVS--------TKHCLVAVGTRG---------- 165 (408)
T ss_dssp CTTCEEEEETTSEEEEEETTTTEEEEEE-ECSS--CE----EEEEECSSC--------SSCCEEEEEESS----------
T ss_pred CCcEEEEEeCCCeEEEeeCCCCccceec-cCCC--ce----eeeEeecCC--------CCCcEEEEEcCC----------
Confidence 6778888774 4788999988765333 2221 11 122232221 155678887754
Q ss_pred cccccCCceEEEEeeCCCCceeeeccCCCceeceeEEecCCc-EEEEcCcCCCCCCcccCCCCCCccEEEcCCCCCCCce
Q 039705 289 EFMNALQDCGRIEITNKSATWQREMMPSPRVMGEMLLLPTGD-VLIINGAKKGTAGWNFATDPNTTPVLYEPDDPINERF 367 (539)
Q Consensus 289 ~~~~a~~s~~~~d~~~~~~~W~~~~M~~~R~~~~~vvlpdG~-I~vvGG~~~g~~g~~~~~~~~~~~e~YdP~t~~g~~W 367 (539)
..+..+|+......... .-..... .+....|+++ ++++|+.+ | .+.+||..+.... .
T Consensus 166 ------~~v~~~d~~~~~~~~~~-~~~~~~v-~~~~~~~~~~~ll~~~~~d-g------------~i~i~d~~~~~~~-~ 223 (408)
T 4a11_B 166 ------PKVQLCDLKSGSCSHIL-QGHRQEI-LAVSWSPRYDYILATASAD-S------------RVKLWDVRRASGC-L 223 (408)
T ss_dssp ------SSEEEEESSSSCCCEEE-CCCCSCE-EEEEECSSCTTEEEEEETT-S------------CEEEEETTCSSCC-S
T ss_pred ------CeEEEEeCCCcceeeee-cCCCCcE-EEEEECCCCCcEEEEEcCC-C------------cEEEEECCCCCcc-c
Confidence 13566776532111111 1122222 2334578888 78888765 2 5778888765221 1
Q ss_pred EecC------------CCCCCccceeeEeeCCCCeEEEecCCCC
Q 039705 368 SELT------------PTSKPRMCHSTSVVLPDGKILVAGSNPH 399 (539)
Q Consensus 368 t~~a------------~~~~~R~yhs~a~llpdG~V~v~GG~~~ 399 (539)
..+. ........-....+.|||+.+++|+.+.
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg 267 (408)
T 4a11_B 224 ITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTDN 267 (408)
T ss_dssp EECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEETTS
T ss_pred ccccccccccceeeccccccccCceeEEEEcCCCCEEEEecCCC
Confidence 1110 0011111112344679999999988643
No 191
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=88.71 E-value=4 Score=39.14 Aligned_cols=137 Identities=12% Similarity=0.118 Sum_probs=66.6
Q ss_pred EEEEECCCCCEEeCccCCCcccccceecCCCcEEEecCCCCCCCeEEEEeCCCCccceeecccccccccccceeEEccCC
Q 039705 82 AVEYDAESAAIRPLKILTDTWSSSGGLSANGTIVISGGWSSRGRSVRYLSGCYHACYWKEHHWELSAKRWFSTQHILPDG 161 (539)
Q Consensus 82 ~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydP~~~t~~W~~~~~~m~~~R~y~s~~~L~dG 161 (539)
..+||..+.+.......+......-++.+||+++++|+.+ ..+++||.. +.+ .+.. +.....-.+.+..+++
T Consensus 197 i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D---g~i~iwd~~--~~~--~~~~-~~~~~~v~~~~~~~~~ 268 (340)
T 4aow_A 197 VKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKD---GQAMLWDLN--EGK--HLYT-LDGGDIINALCFSPNR 268 (340)
T ss_dssp EEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETT---CEEEEEETT--TTE--EEEE-EECSSCEEEEEECSSS
T ss_pred EEEEECCCCceeeEecCCCCcEEEEEECCCCCEEEEEeCC---CeEEEEEec--cCc--eeee-ecCCceEEeeecCCCC
Confidence 5578887766544333333222233456799999999863 578999986 332 2222 3322222233344444
Q ss_pred cEEEEcCccCCeEEEE-ecCCCccee-ec--cCccccCCCCCCCCcceEEEeeCCcEEEEEcCc--eeEeeCCCCe
Q 039705 162 SFIVVGGRREFSYEYI-LKEGKRIIY-DL--PILNETTNPSENNLYPFVFLSTDGNLFIFANDR--SILLNPETNE 231 (539)
Q Consensus 162 ~VyvvGG~~~~~~E~y-P~~~~~~w~-~~--~~l~~~~~~~~~~~yp~~~~~~~G~Iyv~Gg~~--~e~yDp~tn~ 231 (539)
. +++++.+ ..+.+| .... .-. .. ............. --.+...+||+.++.|+.+ +.+||.++++
T Consensus 269 ~-~~~~~~d-~~i~iwd~~~~--~~~~~~~~~~~~~~~~~h~~~-v~~l~~s~dg~~l~sgs~Dg~v~iW~~~tGt 339 (340)
T 4aow_A 269 Y-WLCAATG-PSIKIWDLEGK--IIVDELKQEVISTSSKAEPPQ-CTSLAWSADGQTLFAGYTDNLVRVWQVTIGT 339 (340)
T ss_dssp S-EEEEEET-TEEEEEETTTT--EEEEEECCC-------CCCCC-EEEEEECTTSSEEEEEETTSCEEEEEEEC--
T ss_pred c-eeeccCC-CEEEEEECCCC--eEEEeccccceeeeccCCCCC-EEEEEECCCCCEEEEEeCCCEEEEEeCCCcC
Confidence 4 4555544 455666 3322 110 11 0000000000000 0012234789998888754 6788877654
No 192
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=88.45 E-value=18 Score=34.58 Aligned_cols=143 Identities=13% Similarity=0.125 Sum_probs=73.8
Q ss_pred EEEEECCCCCEEeCccC----CCcccccceecCCCcEEEec-CCC-------CCCCeEEEEeCCCCccceeecccccccc
Q 039705 82 AVEYDAESAAIRPLKIL----TDTWSSSGGLSANGTIVISG-GWS-------SRGRSVRYLSGCYHACYWKEHHWELSAK 149 (539)
Q Consensus 82 ~~~yDp~t~~w~~l~~~----~~~~c~~~~~l~dG~l~v~G-G~~-------~g~~~v~~ydP~~~t~~W~~~~~~m~~~ 149 (539)
..+||+++++++.+... ...+....++.++|++|+.- +.. .....+..+|+. . +...+...+..+
T Consensus 75 l~~~d~~~g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~--g-~~~~~~~~~~~p 151 (297)
T 3g4e_A 75 FCALNWKEQSAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPD--H-HVKKYFDQVDIS 151 (297)
T ss_dssp EEEEETTTTEEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTT--S-CEEEEEEEESBE
T ss_pred EEEEECCCCcEEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECC--C-CEEEEeeccccc
Confidence 56789998888766432 12234445667899988853 110 122467778875 2 222222112222
Q ss_pred cccceeEEccCCc-EEEEcCccCCeEEEE-e--cCCCcceeeccCccccCCCCCCCCcceEEEe-eCCcEEEEEc--Cce
Q 039705 150 RWFSTQHILPDGS-FIVVGGRREFSYEYI-L--KEGKRIIYDLPILNETTNPSENNLYPFVFLS-TDGNLFIFAN--DRS 222 (539)
Q Consensus 150 R~y~s~~~L~dG~-VyvvGG~~~~~~E~y-P--~~~~~~w~~~~~l~~~~~~~~~~~yp~~~~~-~~G~Iyv~Gg--~~~ 222 (539)
.+.+.-+||+ +|++.- ....+.+| . .+. .......+..... ..-+|..+++ .+|+||+... ..+
T Consensus 152 ---ngi~~spdg~~lyv~~~-~~~~i~~~~~d~~~G--~~~~~~~~~~~~~---~~~~p~g~~~d~~G~lwva~~~~~~v 222 (297)
T 3g4e_A 152 ---NGLDWSLDHKIFYYIDS-LSYSVDAFDYDLQTG--QISNRRSVYKLEK---EEQIPDGMCIDAEGKLWVACYNGGRV 222 (297)
T ss_dssp ---EEEEECTTSCEEEEEEG-GGTEEEEEEECTTTC--CEEEEEEEEECCG---GGCEEEEEEEBTTSCEEEEEETTTEE
T ss_pred ---cceEEcCCCCEEEEecC-CCCcEEEEeccCCCC--cccCcEEEEECCC---CCCCCCeeEECCCCCEEEEEcCCCEE
Confidence 2345556886 555543 23445566 3 222 2110000000000 0124444444 6899998863 458
Q ss_pred eEeeCCCCeEEEEc
Q 039705 223 ILLNPETNEILHVF 236 (539)
Q Consensus 223 e~yDp~tn~W~~~~ 236 (539)
.+|||++++....+
T Consensus 223 ~~~d~~tG~~~~~i 236 (297)
T 3g4e_A 223 IRLDPVTGKRLQTV 236 (297)
T ss_dssp EEECTTTCCEEEEE
T ss_pred EEEcCCCceEEEEE
Confidence 99999987765333
No 193
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=88.21 E-value=5.9 Score=38.32 Aligned_cols=105 Identities=11% Similarity=0.048 Sum_probs=60.1
Q ss_pred EEEeeCCcEEEEEcC----ceeEeeCCCCeEEEEcccCCCCCCccCCCccEEecccccCCCCCCCcccEEEEecCCCCCc
Q 039705 206 VFLSTDGNLFIFAND----RSILLNPETNEILHVFPILRGGSRNYPASATSALLPIKLQDPNSNAIRAEVLICGGAKPEA 281 (539)
Q Consensus 206 ~~~~~~G~Iyv~Gg~----~~e~yDp~tn~W~~~~p~mp~~~r~yp~~g~av~lpl~~~~~~~~~~~g~Iyv~GG~~~~~ 281 (539)
.....+|.||+..|. .+..+|+++++..+.+ +++ .+.+ |..+.+ .+++||+.-..+
T Consensus 47 GL~~~~~~LyestG~~g~S~v~~vD~~Tgkv~~~~-~l~--~~~F---geGit~-----------~g~~ly~ltw~~--- 106 (262)
T 3nol_A 47 GFFYRNGYFYESTGLNGRSSIRKVDIESGKTLQQI-ELG--KRYF---GEGISD-----------WKDKIVGLTWKN--- 106 (262)
T ss_dssp EEEEETTEEEEEEEETTEEEEEEECTTTCCEEEEE-ECC--TTCC---EEEEEE-----------ETTEEEEEESSS---
T ss_pred eEEEECCEEEEECCCCCCceEEEEECCCCcEEEEE-ecC--Cccc---eeEEEE-----------eCCEEEEEEeeC---
Confidence 344558999999875 4788999999987555 343 2222 322221 278999985432
Q ss_pred ccccCCCcccccCCceEEEEeeCCCCceeeeccCCCceeceeEEecCCc-EEEEcCcCCCCCCcccCCCCCCccEEEcCC
Q 039705 282 GVLAGKGEFMNALQDCGRIEITNKSATWQREMMPSPRVMGEMLLLPTGD-VLIINGAKKGTAGWNFATDPNTTPVLYEPD 360 (539)
Q Consensus 282 ~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~~M~~~R~~~~~vvlpdG~-I~vvGG~~~g~~g~~~~~~~~~~~e~YdP~ 360 (539)
+.+..||+.+ -+-.. ..+.+-.. -++. +||+ +|+..|.+ ++..+||+
T Consensus 107 -------------~~v~v~D~~t--~~~~~-ti~~~~eG-~glt-~dg~~L~~SdGs~--------------~i~~iDp~ 154 (262)
T 3nol_A 107 -------------GLGFVWNIRN--LRQVR-SFNYDGEG-WGLT-HNDQYLIMSDGTP--------------VLRFLDPE 154 (262)
T ss_dssp -------------SEEEEEETTT--CCEEE-EEECSSCC-CCEE-ECSSCEEECCSSS--------------EEEEECTT
T ss_pred -------------CEEEEEECcc--CcEEE-EEECCCCc-eEEe-cCCCEEEEECCCC--------------eEEEEcCC
Confidence 3466788642 22111 22222222 2233 4554 56554421 57889999
Q ss_pred CC
Q 039705 361 DP 362 (539)
Q Consensus 361 t~ 362 (539)
+.
T Consensus 155 T~ 156 (262)
T 3nol_A 155 SL 156 (262)
T ss_dssp TC
T ss_pred CC
Confidence 87
No 194
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=88.02 E-value=25 Score=35.74 Aligned_cols=158 Identities=11% Similarity=0.120 Sum_probs=81.2
Q ss_pred ceEEEecCCCCEEEEEccccCCCCCccCCCcccccCCCccccccccceeEEEEECCCCCEEeCccCCCcccccceecCCC
Q 039705 33 AMHIILFPNTNKAIMLDAVSLGPSNVRLPVGIYRLNPGAWQKYVDYRALAVEYDAESAAIRPLKILTDTWSSSGGLSANG 112 (539)
Q Consensus 33 ~~~~~ll~~~gkv~~~g~~~~~~~~~~~~~g~~~~~~~~~~g~~~~~~~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG 112 (539)
+..+++- ++|++|+.+..+ ....+||+.+++.+.+......-| -++..+|
T Consensus 133 P~~la~d-~~g~lyv~d~~~---------------------------~~I~~id~~~g~~~~~~~~~~~~~--ia~~~~g 182 (409)
T 3hrp_A 133 MWGIAAV-GNNTVLAYQRDD---------------------------PRVRLISVDDNKVTTVHPGFKGGK--PAVTKDK 182 (409)
T ss_dssp EEEEEEC-STTEEEEEETTT---------------------------TEEEEEETTTTEEEEEEETCCBCB--CEECTTS
T ss_pred ceEEEEe-CCCCEEEEecCC---------------------------CcEEEEECCCCEEEEeeccCCCCc--eeEecCC
Confidence 4455555 788888887521 135678998887766543322222 4556677
Q ss_pred cEEEecCCCCCCCeEEEEeCCCCcccee--eccccc-c-cccccceeEEcc-CCcEEEEcCccCCeEEEE-ecCCCccee
Q 039705 113 TIVISGGWSSRGRSVRYLSGCYHACYWK--EHHWEL-S-AKRWFSTQHILP-DGSFIVVGGRREFSYEYI-LKEGKRIIY 186 (539)
Q Consensus 113 ~l~v~GG~~~g~~~v~~ydP~~~t~~W~--~~~~~m-~-~~R~y~s~~~L~-dG~VyvvGG~~~~~~E~y-P~~~~~~w~ 186 (539)
+.+.+.... +...+..||+. + .|. .+.. + . ...+-.+.++-+ +|++|+.-. ...+.+| +.+. ...
T Consensus 183 ~~l~~~d~~-~~~~I~~~d~~--~-~~~~~~~g~-~~~~~~~~p~~iav~p~~g~lyv~d~--~~~I~~~d~~~~--~~~ 253 (409)
T 3hrp_A 183 QRVYSIGWE-GTHTVYVYMKA--S-GWAPTRIGQ-LGSTFSGKIGAVALDETEEWLYFVDS--NKNFGRFNVKTQ--EVT 253 (409)
T ss_dssp SEEEEEBSS-TTCEEEEEEGG--G-TTCEEEEEE-CCTTSCSCCCBCEECTTSSEEEEECT--TCEEEEEETTTC--CEE
T ss_pred CcEEEEecC-CCceEEEEEcC--C-CceeEEeee-ccchhcCCcEEEEEeCCCCeEEEEEC--CCcEEEEECCCC--CEE
Confidence 654444321 22378999986 3 332 2211 1 1 122223455555 789999543 2345566 5443 221
Q ss_pred eccCccccCCCCCCCCcceEEEee-CCcEEEEEc--CceeEeeCCCC
Q 039705 187 DLPILNETTNPSENNLYPFVFLST-DGNLFIFAN--DRSILLNPETN 230 (539)
Q Consensus 187 ~~~~l~~~~~~~~~~~yp~~~~~~-~G~Iyv~Gg--~~~e~yDp~tn 230 (539)
........ .....+-++.....+ +|+||+.-. +.+.+||+...
T Consensus 254 ~~~~~~~~-g~~~~~P~~~ia~~p~~g~lyv~d~~~~~I~~~~~~g~ 299 (409)
T 3hrp_A 254 LIKQLELS-GSLGTNPGPYLIYYFVDSNFYMSDQNLSSVYKITPDGE 299 (409)
T ss_dssp EEEECCCC-SCCCCSSCCEEEEETTTTEEEEEETTTTEEEEECTTCC
T ss_pred EEeccccc-CCCCCCccccEEEeCCCCEEEEEeCCCCEEEEEecCCC
Confidence 11000000 000011011344556 689998854 45788888765
No 195
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=87.75 E-value=37 Score=37.51 Aligned_cols=251 Identities=10% Similarity=0.104 Sum_probs=123.4
Q ss_pred EEEEECCCCCEEeCccCC--------CcccccceecCCCc-EEEecCCCCCCCeEEEEeCCCCccceeeccc---ccccc
Q 039705 82 AVEYDAESAAIRPLKILT--------DTWSSSGGLSANGT-IVISGGWSSRGRSVRYLSGCYHACYWKEHHW---ELSAK 149 (539)
Q Consensus 82 ~~~yDp~t~~w~~l~~~~--------~~~c~~~~~l~dG~-l~v~GG~~~g~~~v~~ydP~~~t~~W~~~~~---~m~~~ 149 (539)
..+||+.+++++...... .....+-....+|+ |++ |... ..+.+||+. +.++..... .+...
T Consensus 379 l~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWi-gt~~---~Gl~~~d~~--~~~~~~~~~~~~~l~~~ 452 (795)
T 4a2l_A 379 LNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYI-GTHA---GGLSILHRN--SGQVENFNQRNSQLVNE 452 (795)
T ss_dssp EEEECTTTCCEEEECCC------CCSCSCEEEEEEETTTTEEEE-EETT---TEEEEEETT--TCCEEEECTTTSCCSCS
T ss_pred eEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEE-EeCc---CceeEEeCC--CCcEEEeecCCCCcCCC
Confidence 446788888887654211 11111112234788 555 4321 347889998 666665432 02111
Q ss_pred cccceeEEccCCcEEEEcCccCCeEEEE-ecCCCcceeeccCccccCCCCCCCCcceE-EEeeCCcEEEEEcCceeEeeC
Q 039705 150 RWFSTQHILPDGSFIVVGGRREFSYEYI-LKEGKRIIYDLPILNETTNPSENNLYPFV-FLSTDGNLFIFANDRSILLNP 227 (539)
Q Consensus 150 R~y~s~~~L~dG~VyvvGG~~~~~~E~y-P~~~~~~w~~~~~l~~~~~~~~~~~yp~~-~~~~~G~Iyv~Gg~~~e~yDp 227 (539)
+ -.+.+.-.+|++++... . .+-+| |.++ ++......... .....+ +... ..-.+|+|++.......+||+
T Consensus 453 ~-v~~i~~d~~g~lwigt~-~--Gl~~~~~~~~--~~~~~~~~~~~-~~~~~~-~i~~i~~d~~g~lWigt~~Gl~~~~~ 524 (795)
T 4a2l_A 453 N-VYAILPDGEGNLWLGTL-S--ALVRFNPEQR--SFTTIEKEKDG-TPVVSK-QITTLFRDSHKRLWIGGEEGLSVFKQ 524 (795)
T ss_dssp C-EEEEEECSSSCEEEEES-S--CEEEEETTTT--EEEECCBCTTC-CBCCCC-CEEEEEECTTCCEEEEESSCEEEEEE
T ss_pred e-eEEEEECCCCCEEEEec-C--ceeEEeCCCC--eEEEccccccc-cccCCc-eEEEEEECCCCCEEEEeCCceEEEeC
Confidence 1 12233334688887543 2 34566 6655 56433211000 000001 1122 223578999877666789999
Q ss_pred CCCeEEEEcccCCCCCCccCCCccEEecccccCCCCCCCcccEEEEecCCCCCcccccCCCcccccCCceEEEEeeCCCC
Q 039705 228 ETNEILHVFPILRGGSRNYPASATSALLPIKLQDPNSNAIRAEVLICGGAKPEAGVLAGKGEFMNALQDCGRIEITNKSA 307 (539)
Q Consensus 228 ~tn~W~~~~p~mp~~~r~yp~~g~av~lpl~~~~~~~~~~~g~Iyv~GG~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~ 307 (539)
.++++ +.. .... ....+......++. + .+|+|++... . -+.+||+. +.
T Consensus 525 ~~~~~-~~~-~~~~-~~~l~~~~i~~i~~-------d--~~g~lWigT~-~-----------------Gl~~~d~~--~~ 572 (795)
T 4a2l_A 525 EGLDI-QKA-SILP-VSNVTKLFTNCIYE-------A--SNGIIWVGTR-E-----------------GFYCFNEK--DK 572 (795)
T ss_dssp ETTEE-EEC-CCSC-SCGGGGSCEEEEEE-------C--TTSCEEEEES-S-----------------CEEEEETT--TT
T ss_pred CCCeE-EEe-cCCC-CCCCCCCeeEEEEE-------C--CCCCEEEEeC-C-----------------CceeECCC--CC
Confidence 98887 322 1000 00000001111211 1 2677777432 1 13456653 34
Q ss_pred ceee---e-ccCCCceeceeEEecCCcEEEEcCcCCCCCCcccCCCCCCccEEEcCCCCCCCceEecCC---CCCCccce
Q 039705 308 TWQR---E-MMPSPRVMGEMLLLPTGDVLIINGAKKGTAGWNFATDPNTTPVLYEPDDPINERFSELTP---TSKPRMCH 380 (539)
Q Consensus 308 ~W~~---~-~M~~~R~~~~~vvlpdG~I~vvGG~~~g~~g~~~~~~~~~~~e~YdP~t~~g~~Wt~~a~---~~~~R~yh 380 (539)
+++. . .++..... +.+.-.+|+|++... + | +.+|||++. +++.... ++......
T Consensus 573 ~~~~~~~~~gl~~~~i~-~i~~d~~g~lWi~t~-~-G-------------l~~~~~~~~---~~~~~~~~dGl~~~~f~~ 633 (795)
T 4a2l_A 573 QIKRYNTTNGLPNNVVY-GILEDSFGRLWLSTN-R-G-------------ISCFNPETE---KFRNFTESDGLQSNQFNT 633 (795)
T ss_dssp EEEEECGGGTCSCSCEE-EEEECTTSCEEEEET-T-E-------------EEEEETTTT---EEEEECGGGTCSCSCEEE
T ss_pred cEEEeCCCCCCchhheE-EEEECCCCCEEEEcC-C-c-------------eEEEcCCCC---cEEEcCCcCCCccccCcc
Confidence 4443 1 34444332 223345789988552 2 2 468999998 8876432 22222222
Q ss_pred eeEeeCCCCeEEEecCC
Q 039705 381 STSVVLPDGKILVAGSN 397 (539)
Q Consensus 381 s~a~llpdG~V~v~GG~ 397 (539)
.+++...||++|++|.+
T Consensus 634 ~~~~~~~~G~l~~g~~~ 650 (795)
T 4a2l_A 634 ASYCRTSVGQMYFGGIN 650 (795)
T ss_dssp EEEEECTTSCEEEEETT
T ss_pred CceeECCCCeEEEecCC
Confidence 34566789999998764
No 196
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=86.23 E-value=16 Score=41.59 Aligned_cols=63 Identities=14% Similarity=0.084 Sum_probs=39.0
Q ss_pred cCCCcEEEecCCCCCCCeEEEEeCCCCccceeeccc---cc------ccccccceeEEccCCcEEEEcCccCCeEEEE
Q 039705 109 SANGTIVISGGWSSRGRSVRYLSGCYHACYWKEHHW---EL------SAKRWFSTQHILPDGSFIVVGGRREFSYEYI 177 (539)
Q Consensus 109 l~dG~l~v~GG~~~g~~~v~~ydP~~~t~~W~~~~~---~m------~~~R~y~s~~~L~dG~VyvvGG~~~~~~E~y 177 (539)
.+||+++++|+.+ .+++++|.. +........ .+ ....+-.+++.-+||+.+++|+.++ ++.+|
T Consensus 444 spdg~~laSgs~D---gtVrlWd~~--~g~~~~~~~~~~~l~~~~~~~h~~~V~svafspdg~~LAsgs~Dg-tV~lw 515 (902)
T 2oaj_A 444 AEYGTAFITGHSN---GSVRIYDAS--HGDIQDNASFEVNLSRTLNKAKELAVDKISFAAETLELAVSIETG-DVVLF 515 (902)
T ss_dssp CSEEEEEEEEETT---SEEEEEESS--CCTTTTTBCEEEEHHHHTTCSSSCCEEEEEEETTTTEEEEEETTS-CEEEE
T ss_pred cccCcEEEEecCC---CcEEEEECC--CccccCCceEEeechhhcCCCCCCceeEEEecCCCCeEEEEecCc-EEEEE
Confidence 4689999999874 689999987 432211000 01 1111223556667999999998764 45555
No 197
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=85.78 E-value=26 Score=33.74 Aligned_cols=91 Identities=10% Similarity=0.102 Sum_probs=42.5
Q ss_pred ceEEEEeeCCC-Cceeee-ccCCCceeceeEEecCCcEEEEcCcCCCCCCcccCCCCCCccEEEcCCCCCCCceEecCCC
Q 039705 296 DCGRIEITNKS-ATWQRE-MMPSPRVMGEMLLLPTGDVLIINGAKKGTAGWNFATDPNTTPVLYEPDDPINERFSELTPT 373 (539)
Q Consensus 296 s~~~~d~~~~~-~~W~~~-~M~~~R~~~~~vvlpdG~I~vvGG~~~g~~g~~~~~~~~~~~e~YdP~t~~g~~Wt~~a~~ 373 (539)
.+.+|++.... ..++.. .++.| .+.++-++|+|||......... . .......+.+|||+.. ....+..
T Consensus 208 ~I~~~~~~~~~~~~~~~~~~~~gP---~gi~~d~~G~l~va~~~~~~~~--~-~~~~~~~v~~~d~~G~---~~~~~~~- 277 (322)
T 2fp8_A 208 QIVKYWLEGPKKGTAEVLVKIPNP---GNIKRNADGHFWVSSSEELDGN--M-HGRVDPKGIKFDEFGN---ILEVIPL- 277 (322)
T ss_dssp EEEEEESSSTTTTCEEEEEECSSE---EEEEECTTSCEEEEEEEETTSS--T-TSCEEEEEEEECTTSC---EEEEEEC-
T ss_pred eEEEEECCCCcCCccceEEeCCCC---CCeEECCCCCEEEEecCccccc--c-cCCCccEEEEECCCCC---EEEEEEC-
Confidence 46777765311 233332 33322 2345567899999764311000 0 0000114789999644 4443321
Q ss_pred CCCc-cceeeEeeCCCCeEEEecC
Q 039705 374 SKPR-MCHSTSVVLPDGKILVAGS 396 (539)
Q Consensus 374 ~~~R-~yhs~a~llpdG~V~v~GG 396 (539)
+... ..+-+.+...+|++||+..
T Consensus 278 ~~g~~~~~~~~~~~~~g~L~v~~~ 301 (322)
T 2fp8_A 278 PPPFAGEHFEQIQEHDGLLYIGTL 301 (322)
T ss_dssp CTTTTTSCCCEEEEETTEEEEECS
T ss_pred CCCCccccceEEEEeCCEEEEeec
Confidence 1110 1112223346899999854
No 198
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=85.76 E-value=9.8 Score=40.26 Aligned_cols=224 Identities=15% Similarity=0.041 Sum_probs=107.4
Q ss_pred cceecCCCcEEEecCCCCCCCeEEEEeCCCCccceeecccccccccccceeEEccCCcEEEEcCc-c-CCeEEEE--ec-
Q 039705 105 SGGLSANGTIVISGGWSSRGRSVRYLSGCYHACYWKEHHWELSAKRWFSTQHILPDGSFIVVGGR-R-EFSYEYI--LK- 179 (539)
Q Consensus 105 ~~~~l~dG~l~v~GG~~~g~~~v~~ydP~~~t~~W~~~~~~m~~~R~y~s~~~L~dG~VyvvGG~-~-~~~~E~y--P~- 179 (539)
..+..+||+.+++++..+ .++++|+.. +..-..+.. -.. .+-.+.+--+| +++.++.. . .....+| ..
T Consensus 26 ~~~~~~DG~~la~~s~~~--g~~~lw~~~--~g~~~~lt~-~~~-~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~~~~ 98 (582)
T 3o4h_A 26 SLQGVVDGDKLLVVGFSE--GSVNAYLYD--GGETVKLNR-EPI-NSVLDPHYGVG-RVILVRDVSKGAEQHALFKVNTS 98 (582)
T ss_dssp EEEEEETTTEEEEEEEET--TEEEEEEEE--TTEEEECCS-SCC-SEECEECTTCS-EEEEEEECSTTSCCEEEEEEETT
T ss_pred eeecCCCCCeEEEEEccC--CceeEEEEc--CCCcEeeec-ccc-cccccccCCCC-eEEEEeccCCCCcceEEEEEecc
Confidence 344568999998876533 356667654 333333221 110 11111222245 66655443 1 1334555 22
Q ss_pred -CCCcceeeccCccccCCCCCCCCcceEEEeeCCc--EEEEEc-CceeEeeCCCCeEEEEcccCCCCCCccCCCccEEec
Q 039705 180 -EGKRIIYDLPILNETTNPSENNLYPFVFLSTDGN--LFIFAN-DRSILLNPETNEILHVFPILRGGSRNYPASATSALL 255 (539)
Q Consensus 180 -~~~~~w~~~~~l~~~~~~~~~~~yp~~~~~~~G~--Iyv~Gg-~~~e~yDp~tn~W~~~~p~mp~~~r~yp~~g~av~l 255 (539)
.. .-..+..... .......+||+ +|+.+. ....+||..+++.. .+..-+. ...+.-
T Consensus 99 ~~g--~~~~l~~~~~---------~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~-~l~~~~~--------~~~~~s 158 (582)
T 3o4h_A 99 RPG--EEQRLEAVKP---------MRILSGVDTGEAVVFTGATEDRVALYALDGGGLR-ELARLPG--------FGFVSD 158 (582)
T ss_dssp STT--CCEECTTSCS---------BEEEEEEECSSCEEEEEECSSCEEEEEEETTEEE-EEEEESS--------CEEEEE
T ss_pred CCC--ccccccCCCC---------ceeeeeCCCCCeEEEEecCCCCceEEEccCCcEE-EeecCCC--------ceEEEC
Confidence 21 1111111000 01234567774 454444 34668999888765 3422211 112221
Q ss_pred ccccCCCCCCCcccEEEEecCCCCCcccccCCCcccccCCceEEEEeeCCCCceeeeccCCCceeceeEEecCCcEEEEc
Q 039705 256 PIKLQDPNSNAIRAEVLICGGAKPEAGVLAGKGEFMNALQDCGRIEITNKSATWQREMMPSPRVMGEMLLLPTGDVLIIN 335 (539)
Q Consensus 256 pl~~~~~~~~~~~g~Iyv~GG~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~~M~~~R~~~~~vvlpdG~I~vvG 335 (539)
| +|+.++++..+.+ ....+.++|+. +.+++...-..... ....-.|||+.++.+
T Consensus 159 p-----------DG~~la~~~~~~~------------~~~~i~~~d~~--~g~~~~l~~~~~~~-~~~~~SpDG~~l~~~ 212 (582)
T 3o4h_A 159 I-----------RGDLIAGLGFFGG------------GRVSLFTSNLS--SGGLRVFDSGEGSF-SSASISPGMKVTAGL 212 (582)
T ss_dssp E-----------ETTEEEEEEEEET------------TEEEEEEEETT--TCCCEEECCSSCEE-EEEEECTTSCEEEEE
T ss_pred C-----------CCCEEEEEEEcCC------------CCeEEEEEcCC--CCCceEeecCCCcc-ccceECCCCCEEEEc
Confidence 2 7777776654311 11235667764 34454431111122 234567999988843
Q ss_pred CcCCCCCCcccCCCCCCccEEEcCCCCCCCceEecCCCCCCccceeeE-------eeCCCCeEEEecCC
Q 039705 336 GAKKGTAGWNFATDPNTTPVLYEPDDPINERFSELTPTSKPRMCHSTS-------VVLPDGKILVAGSN 397 (539)
Q Consensus 336 G~~~g~~g~~~~~~~~~~~e~YdP~t~~g~~Wt~~a~~~~~R~yhs~a-------~llpdG~V~v~GG~ 397 (539)
..+ + ..++.+||.++. +.+.+... .... .+.+ ...|||++++.+..
T Consensus 213 ~~~-~----------~~~i~~~d~~~~---~~~~~~~~-~~~~-~~~~~~~~~~~~~spdg~~~~~~~~ 265 (582)
T 3o4h_A 213 ETA-R----------EARLVTVDPRDG---SVEDLELP-SKDF-SSYRPTAITWLGYLPDGRLAVVARR 265 (582)
T ss_dssp ECS-S----------CEEEEEECTTTC---CEEECCCS-CSHH-HHHCCSEEEEEEECTTSCEEEEEEE
T ss_pred cCC-C----------eeEEEEEcCCCC---cEEEccCC-CcCh-hhhhhccccceeEcCCCcEEEEEEc
Confidence 322 1 136789999988 66633221 1111 1111 16799999988764
No 199
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=85.08 E-value=9.9 Score=36.84 Aligned_cols=103 Identities=14% Similarity=-0.022 Sum_probs=59.8
Q ss_pred EEEeeCCcEEEEEcCc--eeEeeCCCCeEEEEcccCCCCCCccCCCccEEecccccCCCCCCCcccEEEEecCCCCCccc
Q 039705 206 VFLSTDGNLFIFANDR--SILLNPETNEILHVFPILRGGSRNYPASATSALLPIKLQDPNSNAIRAEVLICGGAKPEAGV 283 (539)
Q Consensus 206 ~~~~~~G~Iyv~Gg~~--~e~yDp~tn~W~~~~p~mp~~~r~yp~~g~av~lpl~~~~~~~~~~~g~Iyv~GG~~~~~~~ 283 (539)
.....++.||+..|.. +..+|+++++..+.+ ++. +.+ |..+.+ .+++||+.-..+
T Consensus 59 GL~~~~~~Ly~stG~~g~v~~iD~~Tgkv~~~~--l~~--~~F---geGit~-----------~g~~Ly~ltw~~----- 115 (268)
T 3nok_A 59 GLVFHQGHFFESTGHQGTLRQLSLESAQPVWME--RLG--NIF---AEGLAS-----------DGERLYQLTWTE----- 115 (268)
T ss_dssp EEEEETTEEEEEETTTTEEEECCSSCSSCSEEE--ECT--TCC---EEEEEE-----------CSSCEEEEESSS-----
T ss_pred eEEEECCEEEEEcCCCCEEEEEECCCCcEEeEE--CCC--Ccc---eeEEEE-----------eCCEEEEEEccC-----
Confidence 3455578999998864 778999999877555 543 222 322221 267999985432
Q ss_pred ccCCCcccccCCceEEEEeeCCCCceeee-ccCCCceeceeEEecCCc-EEEEcCcCCCCCCcccCCCCCCccEEEcCCC
Q 039705 284 LAGKGEFMNALQDCGRIEITNKSATWQRE-MMPSPRVMGEMLLLPTGD-VLIINGAKKGTAGWNFATDPNTTPVLYEPDD 361 (539)
Q Consensus 284 ~~~~~~~~~a~~s~~~~d~~~~~~~W~~~-~M~~~R~~~~~vvlpdG~-I~vvGG~~~g~~g~~~~~~~~~~~e~YdP~t 361 (539)
..+..||+. +-+.. ..+.+-...+ ++ +||+ +|+..|.+ ++..+||++
T Consensus 116 -----------~~v~V~D~~----Tl~~~~ti~~~~eGwG-Lt-~Dg~~L~vSdGs~--------------~l~~iDp~T 164 (268)
T 3nok_A 116 -----------GLLFTWSGM----PPQRERTTRYSGEGWG-LC-YWNGKLVRSDGGT--------------MLTFHEPDG 164 (268)
T ss_dssp -----------CEEEEEETT----TTEEEEEEECSSCCCC-EE-EETTEEEEECSSS--------------EEEEECTTT
T ss_pred -----------CEEEEEECC----cCcEEEEEeCCCceeE-Ee-cCCCEEEEECCCC--------------EEEEEcCCC
Confidence 346678763 22222 2222222222 33 4554 66665522 578899999
Q ss_pred C
Q 039705 362 P 362 (539)
Q Consensus 362 ~ 362 (539)
.
T Consensus 165 ~ 165 (268)
T 3nok_A 165 F 165 (268)
T ss_dssp C
T ss_pred C
Confidence 7
No 200
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=84.78 E-value=58 Score=36.85 Aligned_cols=105 Identities=7% Similarity=0.042 Sum_probs=57.9
Q ss_pred eecCCCcEEEecCCCCCCCeEEEEeCCCCccceeecccccccccccceeEEccCCcEEEEcCccCCeEEEE-ecCCCcce
Q 039705 107 GLSANGTIVISGGWSSRGRSVRYLSGCYHACYWKEHHWELSAKRWFSTQHILPDGSFIVVGGRREFSYEYI-LKEGKRII 185 (539)
Q Consensus 107 ~~l~dG~l~v~GG~~~g~~~v~~ydP~~~t~~W~~~~~~m~~~R~y~s~~~L~dG~VyvvGG~~~~~~E~y-P~~~~~~w 185 (539)
++.+||+++++|+.+ ..+++||.. +..-.. . +.....-.+.+..+ |+.++.|+. ..++.+| ..+. +.
T Consensus 24 afspdg~~lAsgs~D---g~I~lw~~~--~~~~~~--~-~~~~~~V~~l~fsp-g~~L~S~s~-D~~v~lWd~~~~--~~ 91 (902)
T 2oaj_A 24 AFDFTQNLLAIATVT---GEVHIYGQQ--QVEVVI--K-LEDRSAIKEMRFVK-GIYLVVINA-KDTVYVLSLYSQ--KV 91 (902)
T ss_dssp EEETTTTEEEEEETT---SEEEEECST--TCEEEE--E-CSSCCCEEEEEEET-TTEEEEEET-TCEEEEEETTTC--SE
T ss_pred EECCCCCEEEEEeCC---CEEEEEeCC--CcEEEE--E-cCCCCCEEEEEEcC-CCEEEEEEC-cCeEEEEECCCC--cE
Confidence 445789999999863 579999876 432211 1 22222222334444 775555554 4567777 4433 22
Q ss_pred e-eccCccccCCCCCCCCcceEEEeeCCcEEEEEcC--ceeEeeCCCCeE
Q 039705 186 Y-DLPILNETTNPSENNLYPFVFLSTDGNLFIFAND--RSILLNPETNEI 232 (539)
Q Consensus 186 ~-~~~~l~~~~~~~~~~~yp~~~~~~~G~Iyv~Gg~--~~e~yDp~tn~W 232 (539)
. ... .. . . --.+...++|+.+++|.. .+.+||..+.+-
T Consensus 92 ~~~~~---~~-~----~-V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~ 132 (902)
T 2oaj_A 92 LTTVF---VP-G----K-ITSIDTDASLDWMLIGLQNGSMIVYDIDRDQL 132 (902)
T ss_dssp EEEEE---CS-S----C-EEEEECCTTCSEEEEEETTSCEEEEETTTTEE
T ss_pred EEEEc---CC-C----C-EEEEEECCCCCEEEEEcCCCcEEEEECCCCcc
Confidence 1 111 00 0 0 001223368998888874 478899988764
No 201
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=84.36 E-value=16 Score=36.50 Aligned_cols=91 Identities=11% Similarity=0.080 Sum_probs=51.7
Q ss_pred CCceEEEEee---CCCCceeee-c-cCC---------CceeceeEEecCCcEEEEcCcCCCCCCcccCCCCCCccEEEcC
Q 039705 294 LQDCGRIEIT---NKSATWQRE-M-MPS---------PRVMGEMLLLPTGDVLIINGAKKGTAGWNFATDPNTTPVLYEP 359 (539)
Q Consensus 294 ~~s~~~~d~~---~~~~~W~~~-~-M~~---------~R~~~~~vvlpdG~I~vvGG~~~g~~g~~~~~~~~~~~e~YdP 359 (539)
...+.+||+. .....|... + ... ....-++++=++|.+||++-... ..+.++||
T Consensus 99 ~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~------------~~I~rV~p 166 (334)
T 2p9w_A 99 ASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGM------------PAIARVSA 166 (334)
T ss_dssp CCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESS------------CEEEEECT
T ss_pred CCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCC------------CeEEEEeC
Confidence 4568899986 334567653 2 111 12344677788999999865320 14778888
Q ss_pred CCCCCCceEecCCCCCCc-cceeeEeeCCCCeEEEecCC
Q 039705 360 DDPINERFSELTPTSKPR-MCHSTSVVLPDGKILVAGSN 397 (539)
Q Consensus 360 ~t~~g~~Wt~~a~~~~~R-~yhs~a~llpdG~V~v~GG~ 397 (539)
+...-..|-.-.+-...| .+-+. +..|||+.|++-..
T Consensus 167 dG~~~~~~~~~~~~~~~~~G~nGI-v~~pdg~~Liv~~~ 204 (334)
T 2p9w_A 167 DGKTVSTFAWESGNGGQRPGYSGI-TFDPHSNKLIAFGG 204 (334)
T ss_dssp TSCCEEEEEECCCCSSSCCSCSEE-EEETTTTEEEEESS
T ss_pred CCCEEeeeeecCCCcccccCcceE-EEeCCCCEEEEEcC
Confidence 755222354322222223 33454 45689977666544
No 202
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=83.64 E-value=31 Score=32.80 Aligned_cols=59 Identities=10% Similarity=0.095 Sum_probs=32.6
Q ss_pred CCcEEEecCCCCCCCeEEEEeCCCCccceeecccccccccccceeEEccCCcEEEEcCccCCeEEEE-ecCC
Q 039705 111 NGTIVISGGWSSRGRSVRYLSGCYHACYWKEHHWELSAKRWFSTQHILPDGSFIVVGGRREFSYEYI-LKEG 181 (539)
Q Consensus 111 dG~l~v~GG~~~g~~~v~~ydP~~~t~~W~~~~~~m~~~R~y~s~~~L~dG~VyvvGG~~~~~~E~y-P~~~ 181 (539)
++++|++.-. ...+.+||+. +....... +. ..-.+.+.-+||++++... ..+.+| +.++
T Consensus 24 ~~~l~~~d~~---~~~i~~~d~~--~~~~~~~~--~~--~~~~~i~~~~dG~l~v~~~---~~l~~~d~~~g 83 (297)
T 3g4e_A 24 SNSLLFVDIP---AKKVCRWDSF--TKQVQRVT--MD--APVSSVALRQSGGYVATIG---TKFCALNWKEQ 83 (297)
T ss_dssp TTEEEEEETT---TTEEEEEETT--TCCEEEEE--CS--SCEEEEEEBTTSSEEEEET---TEEEEEETTTT
T ss_pred CCEEEEEECC---CCEEEEEECC--CCcEEEEe--CC--CceEEEEECCCCCEEEEEC---CeEEEEECCCC
Confidence 4677777543 3678899998 55433221 11 1112345556899776542 345566 5544
No 203
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=83.06 E-value=33 Score=34.65 Aligned_cols=91 Identities=8% Similarity=-0.184 Sum_probs=50.1
Q ss_pred eEEEEECCCCCEEeC-ccCCCcccccceecCCCcEEEecCCCCCCCeEEEEeCCCCccceeeccc--c----c-------
Q 039705 81 LAVEYDAESAAIRPL-KILTDTWSSSGGLSANGTIVISGGWSSRGRSVRYLSGCYHACYWKEHHW--E----L------- 146 (539)
Q Consensus 81 ~~~~yDp~t~~w~~l-~~~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydP~~~t~~W~~~~~--~----m------- 146 (539)
...+||..+.+.... ...+.......++. ||+++++|+.. ..+++||.. +.+....-. . +
T Consensus 221 ~i~vwd~~~~~~~~~~~~~h~~~v~~~~~s-d~~~l~s~~~d---~~v~vwd~~--~~~~~~~~~~~~~~~~~~~~~~~~ 294 (450)
T 2vdu_B 221 HIKISHYPQCFIVDKWLFGHKHFVSSICCG-KDYLLLSAGGD---DKIFAWDWK--TGKNLSTFDYNSLIKPYLNDQHLA 294 (450)
T ss_dssp CEEEEEESCTTCEEEECCCCSSCEEEEEEC-STTEEEEEESS---SEEEEEETT--TCCEEEEEECHHHHGGGCCTTSBC
T ss_pred cEEEEECCCCceeeeeecCCCCceEEEEEC-CCCEEEEEeCC---CeEEEEECC--CCcEeeeecchhhhhhhhhhcccc
Confidence 356788776654322 22222222223444 99999999853 588999987 443221100 0 0
Q ss_pred ----------ccccccceeEEccCCcEEEEcCccCCeEEEE
Q 039705 147 ----------SAKRWFSTQHILPDGSFIVVGGRREFSYEYI 177 (539)
Q Consensus 147 ----------~~~R~y~s~~~L~dG~VyvvGG~~~~~~E~y 177 (539)
.....-...+..+||+.+++++.....+.+|
T Consensus 295 ~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~d~~i~iw 335 (450)
T 2vdu_B 295 PPRFQNENNDIIEFAVSKIIKSKNLPFVAFFVEATKCIIIL 335 (450)
T ss_dssp ----------CBCCCEEEEEECSSSSEEEEEETTCSEEEEE
T ss_pred cccccccccccceEEEEEEEEeCCCCEEEEEECCCCeEEEE
Confidence 0111222345566888888887555677778
No 204
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=82.69 E-value=62 Score=35.60 Aligned_cols=138 Identities=9% Similarity=-0.009 Sum_probs=73.8
Q ss_pred EEEEECCCCCEEeCccCC-----CcccccceecCCCcEEEecCCCCCCCeEEEEeCCCCccceeeccc--ccccccccce
Q 039705 82 AVEYDAESAAIRPLKILT-----DTWSSSGGLSANGTIVISGGWSSRGRSVRYLSGCYHACYWKEHHW--ELSAKRWFST 154 (539)
Q Consensus 82 ~~~yDp~t~~w~~l~~~~-----~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydP~~~t~~W~~~~~--~m~~~R~y~s 154 (539)
..+||+.+++|+...... ......-....+|+|++..- . ..+.+||+. +.++..... .++...- .+
T Consensus 471 l~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~-~---~Gl~~~~~~--~~~~~~~~~~~~l~~~~i-~~ 543 (781)
T 3v9f_A 471 VFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIGTF-G---GGVGIYTPD--MQLVRKFNQYEGFCSNTI-NQ 543 (781)
T ss_dssp EEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEEEES-S---SCEEEECTT--CCEEEEECTTTTCSCSCE-EE
T ss_pred eEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEEEEc-C---CCEEEEeCC--CCeEEEccCCCCCCCCee-EE
Confidence 456899888886654221 12222223345788887531 1 237789998 777765432 1322221 22
Q ss_pred eEEccCCcEEEEcCccCCeE-EEE-ecCCCcceeeccCccccCCCCCCCCcceEEEeeCCcEEEEEcCceeEeeCCCCeE
Q 039705 155 QHILPDGSFIVVGGRREFSY-EYI-LKEGKRIIYDLPILNETTNPSENNLYPFVFLSTDGNLFIFANDRSILLNPETNEI 232 (539)
Q Consensus 155 ~~~L~dG~VyvvGG~~~~~~-E~y-P~~~~~~w~~~~~l~~~~~~~~~~~yp~~~~~~~G~Iyv~Gg~~~e~yDp~tn~W 232 (539)
.+.-.+|+|++... ... -+| |+++ ++...... +..+.+..-....-.+|+|++.+.+...+|||++.++
T Consensus 544 i~~d~~g~lWi~T~---~Glv~~~d~~~~--~~~~~~~~----~gl~~~~i~~i~~d~~g~lW~~t~~Gl~~~~~~~~~~ 614 (781)
T 3v9f_A 544 IYRSSKGQMWLATG---EGLVCFPSARNF--DYQVFQRK----EGLPNTHIRAISEDKNGNIWASTNTGISCYITSKKCF 614 (781)
T ss_dssp EEECTTSCEEEEET---TEEEEESCTTTC--CCEEECGG----GTCSCCCCCEEEECSSSCEEEECSSCEEEEETTTTEE
T ss_pred EEECCCCCEEEEEC---CCceEEECCCCC--cEEEcccc----CCCCCceEEEEEECCCCCEEEEcCCceEEEECCCCce
Confidence 33334788887532 123 455 5544 44322110 1111111212223357999998888889999999987
Q ss_pred EEEc
Q 039705 233 LHVF 236 (539)
Q Consensus 233 ~~~~ 236 (539)
. ..
T Consensus 615 ~-~~ 617 (781)
T 3v9f_A 615 Y-TY 617 (781)
T ss_dssp E-EE
T ss_pred E-Ee
Confidence 6 44
No 205
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=81.63 E-value=31 Score=32.85 Aligned_cols=137 Identities=13% Similarity=0.093 Sum_probs=71.2
Q ss_pred EEEEECCCCCEEeCccCC----CcccccceecCCCcEEEe----cCCC----------CCCCeEEEEeCCCCccceeecc
Q 039705 82 AVEYDAESAAIRPLKILT----DTWSSSGGLSANGTIVIS----GGWS----------SRGRSVRYLSGCYHACYWKEHH 143 (539)
Q Consensus 82 ~~~yDp~t~~w~~l~~~~----~~~c~~~~~l~dG~l~v~----GG~~----------~g~~~v~~ydP~~~t~~W~~~~ 143 (539)
..+||+. ++.+.+.... .......++..||+++++ |-.. .+...+.+|||. +.+++.+.
T Consensus 109 v~~~~~~-g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~--~g~~~~~~ 185 (305)
T 3dr2_A 109 ITRSDAD-GQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPD--GSPLQRMA 185 (305)
T ss_dssp EEEECTT-SCEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSS--SCCCEEEE
T ss_pred EEEECCC-CCEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCC--CCcEEEEe
Confidence 4567765 5555543211 112234456679999996 4321 113568889997 66665543
Q ss_pred cccccccccceeEEccCCc-EEEEcCcc----CCeEEEE-ecCCCcceeeccCccccCCCCCCCCcce-EEEeeCCcEEE
Q 039705 144 WELSAKRWFSTQHILPDGS-FIVVGGRR----EFSYEYI-LKEGKRIIYDLPILNETTNPSENNLYPF-VFLSTDGNLFI 216 (539)
Q Consensus 144 ~~m~~~R~y~s~~~L~dG~-VyvvGG~~----~~~~E~y-P~~~~~~w~~~~~l~~~~~~~~~~~yp~-~~~~~~G~Iyv 216 (539)
.+..+ .+.+.-+||+ +|+..-.. ...+.+| ...+ ............ ..+|. ..+-.+|+||+
T Consensus 186 -~~~~p---~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~--~l~~~~~~~~~~-----~~~pdgi~~d~~G~lwv 254 (305)
T 3dr2_A 186 -DLDHP---NGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDG--ALHDRRHFASVP-----DGLPDGFCVDRGGWLWS 254 (305)
T ss_dssp -EESSE---EEEEECTTSSEEEEEECCC---CCCEEEEEEEETT--EEEEEEEEECCS-----SSCCCSEEECTTSCEEE
T ss_pred -cCCCC---cceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCC--CccCCeEEEECC-----CCCCCeEEECCCCCEEE
Confidence 23322 2345566887 66654321 1356666 4332 211000000000 01222 23446899998
Q ss_pred EEcCceeEeeCCCCeE
Q 039705 217 FANDRSILLNPETNEI 232 (539)
Q Consensus 217 ~Gg~~~e~yDp~tn~W 232 (539)
..+..+.+||+.....
T Consensus 255 ~~~~gv~~~~~~g~~~ 270 (305)
T 3dr2_A 255 SSGTGVCVFDSDGQLL 270 (305)
T ss_dssp CCSSEEEEECTTSCEE
T ss_pred ecCCcEEEECCCCCEE
Confidence 8767789999975544
No 206
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=79.59 E-value=42 Score=31.71 Aligned_cols=97 Identities=16% Similarity=0.150 Sum_probs=46.9
Q ss_pred ecCCCcEEEecCCCCCCCeEEEEeCCCCccceeecccccccccccceeEEccCCcEEEEcCccCCeEEEE-ecCCCccee
Q 039705 108 LSANGTIVISGGWSSRGRSVRYLSGCYHACYWKEHHWELSAKRWFSTQHILPDGSFIVVGGRREFSYEYI-LKEGKRIIY 186 (539)
Q Consensus 108 ~l~dG~l~v~GG~~~g~~~v~~ydP~~~t~~W~~~~~~m~~~R~y~s~~~L~dG~VyvvGG~~~~~~E~y-P~~~~~~w~ 186 (539)
...+|+|++.. . . +.+||+. +...|..... ... ..+.+ +.+|.||+.. .+ ..+-+| +. +...|.
T Consensus 67 ~~~~g~l~v~t-~----~-l~~~d~~-g~~~~~~~~~---~~~-~~~~~-~~~~~l~v~t-~~-~~l~~~d~~-g~~~~~ 131 (330)
T 3hxj_A 67 IGKDGTIYFGS-D----K-VYAINPD-GTEKWRFDTK---KAI-VSDFT-IFEDILYVTS-MD-GHLYAINTD-GTEKWR 131 (330)
T ss_dssp ETTTTEECCSS-C----E-EEEECCC-GGGGGGSCC---------CCEE-EETTEEEEEC-TT-SEEEEECTT-SCEEEE
T ss_pred EecCCcEEEec-C----c-EEEECCC-CcEEEEEECC---CCc-ccCce-EECCEEEEEe-cC-CEEEEEcCC-CCEEEE
Confidence 34578877632 1 2 8889985 2445643221 111 12222 3388888743 22 234455 44 323453
Q ss_pred eccCccccCCCCCCCCcceEEEeeCCcEEEEEc-CceeEeeCC
Q 039705 187 DLPILNETTNPSENNLYPFVFLSTDGNLFIFAN-DRSILLNPE 228 (539)
Q Consensus 187 ~~~~l~~~~~~~~~~~yp~~~~~~~G~Iyv~Gg-~~~e~yDp~ 228 (539)
....... ........+|+||+... ....+||+.
T Consensus 132 ~~~~~~~---------~~~~~~~~~g~l~vgt~~~~l~~~d~~ 165 (330)
T 3hxj_A 132 FKTKKAI---------YATPIVSEDGTIYVGSNDNYLYAINPD 165 (330)
T ss_dssp EECSSCC---------CSCCEECTTSCEEEECTTSEEEEECTT
T ss_pred EcCCCce---------eeeeEEcCCCEEEEEcCCCEEEEECCC
Confidence 2211000 00113334788887554 457889998
No 207
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=78.92 E-value=38 Score=30.83 Aligned_cols=222 Identities=14% Similarity=0.068 Sum_probs=100.5
Q ss_pred CCCcEEEecCCCCCCCeEEEEeCCCCccceeecccccccccccceeEEccCCcEEEEcCccCCeEEEE-ecC-CCcceee
Q 039705 110 ANGTIVISGGWSSRGRSVRYLSGCYHACYWKEHHWELSAKRWFSTQHILPDGSFIVVGGRREFSYEYI-LKE-GKRIIYD 187 (539)
Q Consensus 110 ~dG~l~v~GG~~~g~~~v~~ydP~~~t~~W~~~~~~m~~~R~y~s~~~L~dG~VyvvGG~~~~~~E~y-P~~-~~~~w~~ 187 (539)
+.|+.|..... .....+.+||.. +.+...+.. ....-.+.+.-+||+.+++++. ..+.+| ..+ . +...
T Consensus 8 ~~~~~~~~~~~-~~~~~i~~~d~~--~~~~~~~~~---~~~~v~~~~~spdg~~l~~~~~--~~i~~~d~~~~~--~~~~ 77 (297)
T 2ojh_A 8 LHTRLSTGPGG-SMRSSIEIFNIR--TRKMRVVWQ---TPELFEAPNWSPDGKYLLLNSE--GLLYRLSLAGDP--SPEK 77 (297)
T ss_dssp ----------C-CCCEEEEEEETT--TTEEEEEEE---ESSCCEEEEECTTSSEEEEEET--TEEEEEESSSCC--SCEE
T ss_pred eeeeEeecCCC-CcceeEEEEeCC--CCceeeecc---CCcceEeeEECCCCCEEEEEcC--CeEEEEeCCCCC--CceE
Confidence 34555554321 124678999987 665544322 2222334555678998888752 356666 444 3 3321
Q ss_pred ccCccccCCCCCCCCcceEEEeeCCcEEEEEcC------ceeEeeCCCCeEEEEcccCCCCCCccCCCccEEecccccCC
Q 039705 188 LPILNETTNPSENNLYPFVFLSTDGNLFIFAND------RSILLNPETNEILHVFPILRGGSRNYPASATSALLPIKLQD 261 (539)
Q Consensus 188 ~~~l~~~~~~~~~~~yp~~~~~~~G~Iyv~Gg~------~~e~yDp~tn~W~~~~p~mp~~~r~yp~~g~av~lpl~~~~ 261 (539)
....... .........+||+.++++.. ..+.+|..+.... .+.... .. .....-|
T Consensus 78 ~~~~~~~------~~~~~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~~-~~~~~~---~~----~~~~~sp----- 138 (297)
T 2ojh_A 78 VDTGFAT------ICNNDHGISPDGALYAISDKVEFGKSAIYLLPSTGGTPR-LMTKNL---PS----YWHGWSP----- 138 (297)
T ss_dssp CCCTTCC------CBCSCCEECTTSSEEEEEECTTTSSCEEEEEETTCCCCE-ECCSSS---SE----EEEEECT-----
T ss_pred ecccccc------ccccceEECCCCCEEEEEEeCCCCcceEEEEECCCCceE-EeecCC---Cc----cceEECC-----
Confidence 1110000 00112345679988777762 3455666665543 332111 11 1112221
Q ss_pred CCCCCccc-EEEEecCCCCCcccccCCCcccccCCceEEEEeeCCCCceeeeccCCCceeceeEEecCCcEEEEcCcCCC
Q 039705 262 PNSNAIRA-EVLICGGAKPEAGVLAGKGEFMNALQDCGRIEITNKSATWQREMMPSPRVMGEMLLLPTGDVLIINGAKKG 340 (539)
Q Consensus 262 ~~~~~~~g-~Iyv~GG~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~~M~~~R~~~~~vvlpdG~I~vvGG~~~g 340 (539)
++ .|++.++.+ ..+..++....+.......-..... .....-|||+.+++.+...+
T Consensus 139 ------dg~~l~~~~~~~----------------~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~~s~dg~~l~~~~~~~~ 195 (297)
T 2ojh_A 139 ------DGKSFTYCGIRD----------------QVFDIYSMDIDSGVETRLTHGEGRN-DGPDYSPDGRWIYFNSSRTG 195 (297)
T ss_dssp ------TSSEEEEEEEET----------------TEEEEEEEETTTCCEEECCCSSSCE-EEEEECTTSSEEEEEECTTS
T ss_pred ------CCCEEEEEECCC----------------CceEEEEEECCCCcceEcccCCCcc-ccceECCCCCEEEEEecCCC
Confidence 34 455455432 1133444332223333221111222 23345689997666553211
Q ss_pred CCCcccCCCCCCccEEEcCCCCCCCceEecCCCCCCccceeeEeeCCCCeEEEecCCCC
Q 039705 341 TAGWNFATDPNTTPVLYEPDDPINERFSELTPTSKPRMCHSTSVVLPDGKILVAGSNPH 399 (539)
Q Consensus 341 ~~g~~~~~~~~~~~e~YdP~t~~g~~Wt~~a~~~~~R~yhs~a~llpdG~V~v~GG~~~ 399 (539)
...+..++.... ....+.... .......+-|||+.+++++...
T Consensus 196 ----------~~~i~~~~~~~~---~~~~~~~~~---~~~~~~~~s~dg~~l~~~~~~~ 238 (297)
T 2ojh_A 196 ----------QMQIWRVRVDGS---SVERITDSA---YGDWFPHPSPSGDKVVFVSYDA 238 (297)
T ss_dssp ----------SCEEEEEETTSS---CEEECCCCS---EEEEEEEECTTSSEEEEEEEET
T ss_pred ----------CccEEEECCCCC---CcEEEecCC---cccCCeEECCCCCEEEEEEcCC
Confidence 123445555555 666554322 2223345679999888777543
No 208
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=78.48 E-value=76 Score=34.00 Aligned_cols=80 Identities=14% Similarity=-0.018 Sum_probs=46.7
Q ss_pred eEEEEECCCCCEEeCccCCCcccccceecCCCcEEEecCCCCCCCeEEEEeCCCCc-----cceeeccccccccc-----
Q 039705 81 LAVEYDAESAAIRPLKILTDTWSSSGGLSANGTIVISGGWSSRGRSVRYLSGCYHA-----CYWKEHHWELSAKR----- 150 (539)
Q Consensus 81 ~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydP~~~t-----~~W~~~~~~m~~~R----- 150 (539)
...+||..+++.+.+..... ........+||+.+++.. ...+.++|.. + .+...+.. .....
T Consensus 102 ~i~~~d~~~~~~~~l~~~~~-~~~~~~~SpdG~~la~~~----~~~i~v~~~~--~~~~~~g~~~~~~~-~~~~~~~~g~ 173 (706)
T 2z3z_A 102 GLVGFDMLARKVTYLFDTNE-ETASLDFSPVGDRVAYVR----NHNLYIARGG--KLGEGMSRAIAVTI-DGTETLVYGQ 173 (706)
T ss_dssp EEEEEETTTTEEEEEECCTT-CCTTCEECTTSSEEEEEE----TTEEEEEECB--CTTSCCCCCEESCS-CCBTTEEESS
T ss_pred EEEEEECCCCceEEccCCcc-cccCCcCCCCCCEEEEEE----CCeEEEEecC--cccccCCCcEEecc-CCCCCeEccc
Confidence 45678988887766543321 122345678998877752 2578899887 5 54443322 11110
Q ss_pred --------ccceeEEccCCcEEEEcC
Q 039705 151 --------WFSTQHILPDGSFIVVGG 168 (539)
Q Consensus 151 --------~y~s~~~L~dG~VyvvGG 168 (539)
...+.+.-+||+.++++.
T Consensus 174 ~~~~ee~~~~~~~~~SpDg~~la~~~ 199 (706)
T 2z3z_A 174 AVHQREFGIEKGTFWSPKGSCLAFYR 199 (706)
T ss_dssp CCGGGCTTCCCSEEECTTSSEEEEEE
T ss_pred chhhhhcCCCceEEECCCCCEEEEEE
Confidence 013445567998888775
No 209
>3a72_A EXO-arabinanase; arabinase, glycosyl hydrolase, hydrolase; HET: AHR; 1.04A {Penicillium chrysogenum} PDB: 3a71_A*
Probab=78.08 E-value=59 Score=32.53 Aligned_cols=67 Identities=15% Similarity=0.326 Sum_probs=36.7
Q ss_pred cceeEEccCCcEEEEcCc-----cCCeEEEE-ecCCCcceeeccCccccCCCCCCCCcceEEEee-------CCcEEEEE
Q 039705 152 FSTQHILPDGSFIVVGGR-----REFSYEYI-LKEGKRIIYDLPILNETTNPSENNLYPFVFLST-------DGNLFIFA 218 (539)
Q Consensus 152 y~s~~~L~dG~VyvvGG~-----~~~~~E~y-P~~~~~~w~~~~~l~~~~~~~~~~~yp~~~~~~-------~G~Iyv~G 218 (539)
|+..+.|.||+|++.-=. ......+| ...+..+|.....+............|.++.++ +|+|++.+
T Consensus 25 yp~~v~L~dG~lLa~~~~~~~~~~~~~~~v~rS~DgG~TW~~~~~v~~~~~g~~~~~~P~l~~lp~~v~~~~~G~ll~~~ 104 (355)
T 3a72_A 25 YPRNEQLPNGDLLATWENYSPEPPAVYFPIYRSKDHGKTWNEISRVHDTVNGYGLRYQPFLYSLPERVGSFKKGTLLLAG 104 (355)
T ss_dssp EEEEEECTTSCEEEEEEECCCSSSCCCEEEEEESSTTSCCEEEEEECCTTTSSCEEEEEEEEECSSCBTTBCTTCEEEEE
T ss_pred cceEEEcCCCCEEEEEEeecCCCCCceEEEEEEcCCCcCcCCCcccCCCcCCcccccCCcEEecCcccccCCCCcEEEEE
Confidence 688899999999886211 11234567 544466886432221111000111145555556 89998885
No 210
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=77.75 E-value=16 Score=37.50 Aligned_cols=130 Identities=10% Similarity=0.082 Sum_probs=71.4
Q ss_pred CCcEEEEEc-CceeEeeCCCCeEEEEcccCCCCCCccCCCccEEecccccCCCCCCCccc-EEEEecCCCCCcccccCCC
Q 039705 211 DGNLFIFAN-DRSILLNPETNEILHVFPILRGGSRNYPASATSALLPIKLQDPNSNAIRA-EVLICGGAKPEAGVLAGKG 288 (539)
Q Consensus 211 ~G~Iyv~Gg-~~~e~yDp~tn~W~~~~p~mp~~~r~yp~~g~av~lpl~~~~~~~~~~~g-~Iyv~GG~~~~~~~~~~~~ 288 (539)
+|+||+.-- ..+.+||+.+++.+...+.. ..| .+.++ - .++ .||++.-... .
T Consensus 149 ~g~Lyv~d~~~~I~~id~~~~~v~~~~~~~-----~~P-~~ia~-d-----------~~G~~lyvad~~~~-~------- 202 (430)
T 3tc9_A 149 HNHLYLVGEQHPTRLIDFEKEYVSTVYSGL-----SKV-RTICW-T-----------HEADSMIITNDQNN-N------- 202 (430)
T ss_dssp EEEEEEEEBTEEEEEEETTTTEEEEEECCC-----SCE-EEEEE-C-----------TTSSEEEEEECCSC-T-------
T ss_pred CCeEEEEeCCCcEEEEECCCCEEEEEecCC-----CCc-ceEEE-e-----------CCCCEEEEEeCCCC-c-------
Confidence 488998854 56778999998877333211 112 12222 1 144 4999865321 0
Q ss_pred cccccCCceEEEEeeCCCCcee---ee-ccCCCceeceeEEec-CCcEEEEcCcCCCCCCcccCCCCCCccEEEcCCCCC
Q 039705 289 EFMNALQDCGRIEITNKSATWQ---RE-MMPSPRVMGEMLLLP-TGDVLIINGAKKGTAGWNFATDPNTTPVLYEPDDPI 363 (539)
Q Consensus 289 ~~~~a~~s~~~~d~~~~~~~W~---~~-~M~~~R~~~~~vvlp-dG~I~vvGG~~~g~~g~~~~~~~~~~~e~YdP~t~~ 363 (539)
....+..++.. ..|. .. .+..++ +.++-| +|.||+.--.. ..+.+||+++.
T Consensus 203 ----~~~~v~~~~~~---g~~~~~~~l~~~~~p~---giavdp~~g~lyv~d~~~-------------~~V~~~~~~~~- 258 (430)
T 3tc9_A 203 ----DRPNNYILTRE---SGFKVITELTKGQNCN---GAETHPINGELYFNSWNA-------------GQVFRYDFTTQ- 258 (430)
T ss_dssp ----TSEEEEEEEGG---GTSCSEEEEEECSSCC---CEEECTTTCCEEEEETTT-------------TEEEEEETTTT-
T ss_pred ----ccceEEEEeCC---CceeeeeeeccCCCce---EEEEeCCCCEEEEEECCC-------------CEEEEEECCCC-
Confidence 11223445542 3343 22 344433 445667 89999975322 15889999876
Q ss_pred CCceEec---CCCCCCccceeeEeeCCCCe-EEEecC
Q 039705 364 NERFSEL---TPTSKPRMCHSTSVVLPDGK-ILVAGS 396 (539)
Q Consensus 364 g~~Wt~~---a~~~~~R~yhs~a~llpdG~-V~v~GG 396 (539)
..+.+ .....|+ + .++.|||+ +||+-.
T Consensus 259 --~~~~~~~~~~~~~P~---g-ia~~pdG~~lyv~d~ 289 (430)
T 3tc9_A 259 --ETTPLFTIQDSGWEF---H-IQFHPSGNYAYIVVV 289 (430)
T ss_dssp --EEEEEEECSSSSCCE---E-EEECTTSSEEEEEET
T ss_pred --cEEEEEEcCCCCcce---e-EEEcCCCCEEEEEEC
Confidence 44232 2222333 2 34678998 999844
No 211
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=77.67 E-value=46 Score=31.01 Aligned_cols=87 Identities=17% Similarity=0.080 Sum_probs=46.4
Q ss_pred eEEEEECCCCCEEeCccCCCcccccceecCCCcEEEecCCCCCCCeEEEEeCCCCccceeecccccc-cccccceeEEcc
Q 039705 81 LAVEYDAESAAIRPLKILTDTWSSSGGLSANGTIVISGGWSSRGRSVRYLSGCYHACYWKEHHWELS-AKRWFSTQHILP 159 (539)
Q Consensus 81 ~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydP~~~t~~W~~~~~~m~-~~R~y~s~~~L~ 159 (539)
...+||.++++.......+...+. ....++.++++|+.. ..+..++.. ..... ... +. ............
T Consensus 90 ~v~iw~~~~~~~~~~~~~h~~~~~--~~~~~~~~l~s~~~~---~~~~~~~~~--~~~~~-~~~-~~~~~~~~~~~~~~~ 160 (318)
T 4ggc_A 90 EVQLWDVQQQKRLRNMTSHSARVG--SLSWNSYILSSGSRS---GHIHHHDVR--VAEHH-VAT-LSGHSQEVCGLRWAP 160 (318)
T ss_dssp EEEEEETTTTEEEEEEECCSSCEE--EEEEETTEEEEEETT---SEEEEEETT--SSSCE-EEE-EECCSSCEEEEEECT
T ss_pred cEEEeecCCceeEEEecCccceEE--EeecCCCEEEEEecC---CceEeeecC--CCcee-EEE-EcCccCceEEEEEcC
Confidence 467899888765443333333221 234578888888753 455666654 22221 111 11 112223344556
Q ss_pred CCcEEEEcCccCCeEEEE
Q 039705 160 DGSFIVVGGRREFSYEYI 177 (539)
Q Consensus 160 dG~VyvvGG~~~~~~E~y 177 (539)
+|+.++.|+.++ ++.+|
T Consensus 161 ~~~~l~s~~~d~-~i~iw 177 (318)
T 4ggc_A 161 DGRHLASGGNDN-LVNVW 177 (318)
T ss_dssp TSSEEEEEETTS-CEEEE
T ss_pred CCCEEEEEecCc-ceeEE
Confidence 788888887653 46666
No 212
>3a72_A EXO-arabinanase; arabinase, glycosyl hydrolase, hydrolase; HET: AHR; 1.04A {Penicillium chrysogenum} PDB: 3a71_A*
Probab=77.37 E-value=16 Score=36.86 Aligned_cols=172 Identities=14% Similarity=0.180 Sum_probs=79.4
Q ss_pred CCCcceEEEeeCCcEEEEEc--------CceeEe--eCCCCeEEEEcccCCCCCCccCC--CccEEecccccCCCCCCCc
Q 039705 200 NNLYPFVFLSTDGNLFIFAN--------DRSILL--NPETNEILHVFPILRGGSRNYPA--SATSALLPIKLQDPNSNAI 267 (539)
Q Consensus 200 ~~~yp~~~~~~~G~Iyv~Gg--------~~~e~y--Dp~tn~W~~~~p~mp~~~r~yp~--~g~av~lpl~~~~~~~~~~ 267 (539)
...||..+.+.||.|++..- ....+| +-...+|. .+..+......+.. ......+|-.. ...-
T Consensus 22 ~~~yp~~v~L~dG~lLa~~~~~~~~~~~~~~~v~rS~DgG~TW~-~~~~v~~~~~g~~~~~~P~l~~lp~~v----~~~~ 96 (355)
T 3a72_A 22 RTLYPRNEQLPNGDLLATWENYSPEPPAVYFPIYRSKDHGKTWN-EISRVHDTVNGYGLRYQPFLYSLPERV----GSFK 96 (355)
T ss_dssp SEEEEEEEECTTSCEEEEEEECCCSSSCCCEEEEEESSTTSCCE-EEEEECCTTTSSCEEEEEEEEECSSCB----TTBC
T ss_pred CCccceEEEcCCCCEEEEEEeecCCCCCceEEEEEEcCCCcCcC-CCcccCCCcCCcccccCCcEEecCccc----ccCC
Confidence 45689989999999998631 122233 22345787 44333221101100 01112222000 0002
Q ss_pred ccEEEEecCCCCCcccccCCCcccccCCceEEEEeeCCCCceeee-c-----cCCC-----ceeceeEEecCCcEEEEcC
Q 039705 268 RAEVLICGGAKPEAGVLAGKGEFMNALQDCGRIEITNKSATWQRE-M-----MPSP-----RVMGEMLLLPTGDVLIING 336 (539)
Q Consensus 268 ~g~Iyv~GG~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~-~-----M~~~-----R~~~~~vvlpdG~I~vvGG 336 (539)
+|+|+++|-..... .....+..+--.|...+|+.. . ++.+ ..+...+.+.+|+|++.-.
T Consensus 97 ~G~ll~~~~~~~~d----------~~~~~~~v~~S~D~G~TW~~~~~i~~~~~~~~~~g~~~v~eP~~~~~~G~l~~~~~ 166 (355)
T 3a72_A 97 KGTLLLAGSSIPTD----------LSSTDIVLYASQDDGMTWDFVSHIAAGGEARPNNGLTPVWEPFLLANKGKLICYYS 166 (355)
T ss_dssp TTCEEEEEEECCTT----------CCCEEEEEEEESSTTSCCEEEEEEEEESCSSCCTTCCCEEEEEEEEETTEEEEEEE
T ss_pred CCcEEEEEeeecCC----------CCCceEEEEEECCCCccCccCccccccCccccccCCCccccceEEccCCeEEEEEC
Confidence 67888774211000 001123344444556889974 3 2211 1211245677999988764
Q ss_pred cCCCCCCcccCCCCCCccEEEcCCCCCCCceEecCCC-----CCCccceeeEeeCCCCeEEEe
Q 039705 337 AKKGTAGWNFATDPNTTPVLYEPDDPINERFSELTPT-----SKPRMCHSTSVVLPDGKILVA 394 (539)
Q Consensus 337 ~~~g~~g~~~~~~~~~~~e~YdP~t~~g~~Wt~~a~~-----~~~R~yhs~a~llpdG~V~v~ 394 (539)
...+.. ...+....--.+| |++|+..... ...|.....++-|+||+++++
T Consensus 167 ~~~~~~-------~~~~~~~~~~S~D-G~TWs~~~~~~~~~~~~~rpg~p~v~~l~dG~l~l~ 221 (355)
T 3a72_A 167 DQRDNA-------TYGQTMVHQVTND-LKNWGPVVEDVTYPTYTDRPGMPVVTKLPNGQYFYV 221 (355)
T ss_dssp ECCCTT-------TCSCEEEEEEESS-SSSCCCCEEEECCSSTTCEEEEEEEEECTTSCEEEE
T ss_pred CCCCCC-------CCCcEEEEEECCC-CCCCCCCeeccccCccCCCCCceEEEECCCCCEEEE
Confidence 321100 0011222223345 7799764322 112333445667899998776
No 213
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=77.01 E-value=59 Score=31.99 Aligned_cols=73 Identities=14% Similarity=0.144 Sum_probs=41.0
Q ss_pred CceEEEEeeCCCCceeee-ccCCCceeceeEEecCCcEEEEcCcCCCCCCcccCCCCCCccEEEcCCCCCCCceEecCCC
Q 039705 295 QDCGRIEITNKSATWQRE-MMPSPRVMGEMLLLPTGDVLIINGAKKGTAGWNFATDPNTTPVLYEPDDPINERFSELTPT 373 (539)
Q Consensus 295 ~s~~~~d~~~~~~~W~~~-~M~~~R~~~~~vvlpdG~I~vvGG~~~g~~g~~~~~~~~~~~e~YdP~t~~g~~Wt~~a~~ 373 (539)
.++..||+. +.+.. .++.+. -.+...-|||+.+.+.+.+ ++.+||+++. +-+.+...
T Consensus 286 ~~v~viD~~----t~~~v~~i~~~~-p~~ia~spdg~~l~v~n~~--------------~v~v~D~~t~---~l~~~~~i 343 (361)
T 2oiz_A 286 AEIWVMDTK----TKQRVARIPGRD-ALSMTIDQQRNLMLTLDGG--------------NVNVYDISQP---EPKLLRTI 343 (361)
T ss_dssp SEEEEEETT----TTEEEEEEECTT-CCEEEEETTTTEEEEECSS--------------CEEEEECSSS---SCEEEEEE
T ss_pred ceEEEEECC----CCcEEEEEecCC-eeEEEECCCCCEEEEeCCC--------------eEEEEECCCC---cceeeEEe
Confidence 457778863 23333 343333 3455667899866554421 6789998776 33555442
Q ss_pred -CCCccceeeEeeCCCCe
Q 039705 374 -SKPRMCHSTSVVLPDGK 390 (539)
Q Consensus 374 -~~~R~yhs~a~llpdG~ 390 (539)
...+.=+.. ++.|||+
T Consensus 344 ~~~G~~P~~~-~~~p~G~ 360 (361)
T 2oiz_A 344 EGAAEASLQV-QFHPVGG 360 (361)
T ss_dssp TTSCSSEEEE-EECCCSC
T ss_pred ccCCCCcEEE-EecCCCC
Confidence 333433444 4568885
No 214
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=76.00 E-value=87 Score=33.39 Aligned_cols=106 Identities=14% Similarity=0.114 Sum_probs=59.1
Q ss_pred CCCcEEEecCCCCCCCeEEEEeCCCCccceeecccccccccccceeEEccCCcEEEEcCccCCeEEEE-ec--CCCccee
Q 039705 110 ANGTIVISGGWSSRGRSVRYLSGCYHACYWKEHHWELSAKRWFSTQHILPDGSFIVVGGRREFSYEYI-LK--EGKRIIY 186 (539)
Q Consensus 110 ~dG~l~v~GG~~~g~~~v~~ydP~~~t~~W~~~~~~m~~~R~y~s~~~L~dG~VyvvGG~~~~~~E~y-P~--~~~~~w~ 186 (539)
+++.+||+... ...+.++|+. +.+-.. . +..+..-+..+.-+||+.+.+++.+ ..+.+| .. +. +-.
T Consensus 165 ~~~~~~V~~~~---~~~V~viD~~--t~~v~~--~-i~~g~~p~~v~~SpDGr~lyv~~~d-g~V~viD~~~~t~--~~v 233 (567)
T 1qks_A 165 LENLFSVTLRD---AGQIALIDGS--TYEIKT--V-LDTGYAVHISRLSASGRYLFVIGRD-GKVNMIDLWMKEP--TTV 233 (567)
T ss_dssp GGGEEEEEETT---TTEEEEEETT--TCCEEE--E-EECSSCEEEEEECTTSCEEEEEETT-SEEEEEETTSSSC--CEE
T ss_pred CCceEEEEeCC---CCeEEEEECC--CCeEEE--E-EeCCCCccceEECCCCCEEEEEcCC-CeEEEEECCCCCC--cEe
Confidence 34677777543 4689999997 554322 2 4444333456666788755555543 356666 43 22 111
Q ss_pred -eccCccccCCCCCCCCcceEEEe-----eCCcEEEEEc---CceeEeeCCCCeEEEEc
Q 039705 187 -DLPILNETTNPSENNLYPFVFLS-----TDGNLFIFAN---DRSILLNPETNEILHVF 236 (539)
Q Consensus 187 -~~~~l~~~~~~~~~~~yp~~~~~-----~~G~Iyv~Gg---~~~e~yDp~tn~W~~~~ 236 (539)
..+. ...|..+.+ +||+..++++ .++.++|..+.+-.+.+
T Consensus 234 ~~i~~----------G~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i 282 (567)
T 1qks_A 234 AEIKI----------GSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQ 282 (567)
T ss_dssp EEEEC----------CSEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEE
T ss_pred EEEec----------CCCCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEE
Confidence 1111 123444444 4897666655 45788999888766444
No 215
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=75.87 E-value=72 Score=32.37 Aligned_cols=52 Identities=12% Similarity=0.130 Sum_probs=31.2
Q ss_pred eEEEEECCCCCEEe-CccCC------CcccccceecCCCcEEEecCCCCCCCeEEEEeCC
Q 039705 81 LAVEYDAESAAIRP-LKILT------DTWSSSGGLSANGTIVISGGWSSRGRSVRYLSGC 133 (539)
Q Consensus 81 ~~~~yDp~t~~w~~-l~~~~------~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydP~ 133 (539)
...+||+.|.+... +.... ......-++.+||+.+.+.-.. ...++.+.|..
T Consensus 110 ~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~-~~~~VsVID~~ 168 (386)
T 3sjl_D 110 YVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFS-PAPAVGVVDLE 168 (386)
T ss_dssp EEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECS-SSCEEEEEETT
T ss_pred EEEEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcC-CCCeEEEEECC
Confidence 57889999988643 33221 1233445667898754443211 13678889987
No 216
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=75.22 E-value=59 Score=31.09 Aligned_cols=133 Identities=14% Similarity=0.070 Sum_probs=64.9
Q ss_pred EEEECCCCCEEeCccC----CCcccccceecC-CCcEEEecCCC--------------CCCCeEEEEeCCCCccceeecc
Q 039705 83 VEYDAESAAIRPLKIL----TDTWSSSGGLSA-NGTIVISGGWS--------------SRGRSVRYLSGCYHACYWKEHH 143 (539)
Q Consensus 83 ~~yDp~t~~w~~l~~~----~~~~c~~~~~l~-dG~l~v~GG~~--------------~g~~~v~~ydP~~~t~~W~~~~ 143 (539)
..||+.+++.+.+... ...+....++.. +|+||+.-... .....+.+||+. +.+.....
T Consensus 104 ~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~--~~~~~~~~ 181 (322)
T 2fp8_A 104 SVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPS--TKETTLLL 181 (322)
T ss_dssp EEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETT--TTEEEEEE
T ss_pred EEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCC--CCEEEEec
Confidence 3456665544433211 112233445667 89999974210 112468889997 55544332
Q ss_pred cccccccccceeEEccCCc-EEEEcCccCCeEEEE-ecCC-CcceeeccCccccCCCCCCCCcceEEE-eeCCcEEEEEc
Q 039705 144 WELSAKRWFSTQHILPDGS-FIVVGGRREFSYEYI-LKEG-KRIIYDLPILNETTNPSENNLYPFVFL-STDGNLFIFAN 219 (539)
Q Consensus 144 ~~m~~~R~y~s~~~L~dG~-VyvvGG~~~~~~E~y-P~~~-~~~w~~~~~l~~~~~~~~~~~yp~~~~-~~~G~Iyv~Gg 219 (539)
..+..+ ...+.-+||+ +||.--. ...+.+| .... ........-+. . |..++ -.+|+||+...
T Consensus 182 ~~~~~p---~gia~~~dg~~lyv~d~~-~~~I~~~~~~~~~~~~~~~~~~~~--------g--P~gi~~d~~G~l~va~~ 247 (322)
T 2fp8_A 182 KELHVP---GGAEVSADSSFVLVAEFL-SHQIVKYWLEGPKKGTAEVLVKIP--------N--PGNIKRNADGHFWVSSS 247 (322)
T ss_dssp EEESCC---CEEEECTTSSEEEEEEGG-GTEEEEEESSSTTTTCEEEEEECS--------S--EEEEEECTTSCEEEEEE
T ss_pred cCCccC---cceEECCCCCEEEEEeCC-CCeEEEEECCCCcCCccceEEeCC--------C--CCCeEECCCCCEEEEec
Confidence 212222 2344555776 6765322 2345666 4321 01121110010 1 33333 35899998753
Q ss_pred ------------CceeEeeCCCCe
Q 039705 220 ------------DRSILLNPETNE 231 (539)
Q Consensus 220 ------------~~~e~yDp~tn~ 231 (539)
..+.+||+....
T Consensus 248 ~~~~~~~~~~~~~~v~~~d~~G~~ 271 (322)
T 2fp8_A 248 EELDGNMHGRVDPKGIKFDEFGNI 271 (322)
T ss_dssp EETTSSTTSCEEEEEEEECTTSCE
T ss_pred CcccccccCCCccEEEEECCCCCE
Confidence 236789997543
No 217
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=74.57 E-value=61 Score=30.90 Aligned_cols=80 Identities=11% Similarity=0.000 Sum_probs=42.7
Q ss_pred ccceEEEecCCCCEEEEEccccCCCCCccCCCcccccCCCccccccccceeEEEEECCCCCEEeCccCCCcccccceecC
Q 039705 31 ISAMHIILFPNTNKAIMLDAVSLGPSNVRLPVGIYRLNPGAWQKYVDYRALAVEYDAESAAIRPLKILTDTWSSSGGLSA 110 (539)
Q Consensus 31 ~~~~~~~ll~~~gkv~~~g~~~~~~~~~~~~~g~~~~~~~~~~g~~~~~~~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~ 110 (539)
..+..+++- ++|++|+.+... + ...+||+..+.-+..... ..-.+-++..
T Consensus 32 ~~pegia~~-~~g~lyv~d~~~----------~-----------------~I~~~d~~g~~~~~~~~~--~~p~gia~~~ 81 (306)
T 2p4o_A 32 TFLENLASA-PDGTIFVTNHEV----------G-----------------EIVSITPDGNQQIHATVE--GKVSGLAFTS 81 (306)
T ss_dssp CCEEEEEEC-TTSCEEEEETTT----------T-----------------EEEEECTTCCEEEEEECS--SEEEEEEECT
T ss_pred CCcceEEEC-CCCCEEEEeCCC----------C-----------------eEEEECCCCceEEEEeCC--CCceeEEEcC
Confidence 345566665 789999887422 1 244567665322211111 1112234456
Q ss_pred CCcEEEecCCCCCCCeEEEEeCCCCccceeecc
Q 039705 111 NGTIVISGGWSSRGRSVRYLSGCYHACYWKEHH 143 (539)
Q Consensus 111 dG~l~v~GG~~~g~~~v~~ydP~~~t~~W~~~~ 143 (539)
||++|++....+ ...+..||+. +.+.+.+.
T Consensus 82 dG~l~vad~~~~-~~~v~~~d~~--~g~~~~~~ 111 (306)
T 2p4o_A 82 NGDLVATGWNAD-SIPVVSLVKS--DGTVETLL 111 (306)
T ss_dssp TSCEEEEEECTT-SCEEEEEECT--TSCEEEEE
T ss_pred CCcEEEEeccCC-cceEEEEcCC--CCeEEEEE
Confidence 899988753221 1346778876 55555443
No 218
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=74.38 E-value=1e+02 Score=33.44 Aligned_cols=100 Identities=14% Similarity=0.060 Sum_probs=49.6
Q ss_pred EEEEECCCCC--EEeCccCC-----Ccccc---cceecCCCcEEEecCCCCCCCeEEEEeCCCCccceeecccccccccc
Q 039705 82 AVEYDAESAA--IRPLKILT-----DTWSS---SGGLSANGTIVISGGWSSRGRSVRYLSGCYHACYWKEHHWELSAKRW 151 (539)
Q Consensus 82 ~~~yDp~t~~--w~~l~~~~-----~~~c~---~~~~l~dG~l~v~GG~~~g~~~v~~ydP~~~t~~W~~~~~~m~~~R~ 151 (539)
...+|.+|++ |+.-.... ...|. .+.++.+++||+.... ..+..+|..++...|+.... -....+
T Consensus 78 v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~d----g~l~alD~~tG~~~W~~~~~-~~~~~~ 152 (668)
T 1kv9_A 78 VIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVALWGDKVYVGTLD----GRLIALDAKTGKAIWSQQTT-DPAKPY 152 (668)
T ss_dssp EEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEEBTEEEEECTT----SEEEEEETTTCCEEEEEECS-CTTSSC
T ss_pred EEEEECCCChhceEECCCCCccccccccccCCccceEEECCEEEEEcCC----CEEEEEECCCCCEeeeeccC-CCCCcc
Confidence 4557777664 65432211 12332 2344567777775432 46889999855567875321 111111
Q ss_pred -cceeEEccCCcEEEEcCcc----CCeEEEE-ecCCCccee
Q 039705 152 -FSTQHILPDGSFIVVGGRR----EFSYEYI-LKEGKRIIY 186 (539)
Q Consensus 152 -y~s~~~L~dG~VyvvGG~~----~~~~E~y-P~~~~~~w~ 186 (539)
..+.-++.+|+||+..+.. ...+..| ++++...|.
T Consensus 153 ~~~~~P~v~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~ 193 (668)
T 1kv9_A 153 SITGAPRVVKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWR 193 (668)
T ss_dssp BCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEE
T ss_pred eecCCCEEECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEE
Confidence 1122234478887743221 1244555 555444564
No 219
>2ydt_A EXO-1,5-alpha-L-arabinofuranobiosidase; hydrolase; 1.60A {Gibberella zeae} PDB: 2w5n_A* 2w5o_A* 2ydp_A
Probab=72.52 E-value=84 Score=31.60 Aligned_cols=57 Identities=7% Similarity=0.348 Sum_probs=35.4
Q ss_pred cCCcEEEEcCcCCCCCCcccCCCCCCccEEEcCCCCCCC--ceEecCCCCCCccceeeEeeCCCC--eEEEecCCCCC
Q 039705 327 PTGDVLIINGAKKGTAGWNFATDPNTTPVLYEPDDPINE--RFSELTPTSKPRMCHSTSVVLPDG--KILVAGSNPHS 400 (539)
Q Consensus 327 pdG~I~vvGG~~~g~~g~~~~~~~~~~~e~YdP~t~~g~--~Wt~~a~~~~~R~yhs~a~llpdG--~V~v~GG~~~~ 400 (539)
++|+|++.++... ++| -.++.|+ +|+.... +.+..|-...+.+.++ .++++|+....
T Consensus 286 ~~g~l~~s~~~~~---------------~v~-~~~~~g~~~~W~~~~~-~~~~~Ys~~l~~~~~~~~~l~~~~~~~~~ 346 (367)
T 2ydt_A 286 KNGTIVVSCGTRS---------------EIF-TNQALGDASAWKKWDV-PQPTAYTRSLLTFQKDPDLLMIMGAGILP 346 (367)
T ss_dssp TTCEEEEECSSCS---------------CEE-EESSTTCTTCCEEECC-SSCCCTTCEEEEETTEEEEEEEEECCCSS
T ss_pred CCCeEEEEcCCCc---------------eEE-EECCCCCCCcceeccC-CCCCCCCcceEecCCCCCEEEEecCcccC
Confidence 5789999886321 122 1222333 8998754 5667776655555554 78999986543
No 220
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=72.47 E-value=89 Score=33.47 Aligned_cols=262 Identities=7% Similarity=-0.106 Sum_probs=0.0
Q ss_pred eEEEEECCCCCEEeCccCCCcc---cccceecCCCcEEEecCCCCCC------CeEEEEeCCCCccceeecccccccccc
Q 039705 81 LAVEYDAESAAIRPLKILTDTW---SSSGGLSANGTIVISGGWSSRG------RSVRYLSGCYHACYWKEHHWELSAKRW 151 (539)
Q Consensus 81 ~~~~yDp~t~~w~~l~~~~~~~---c~~~~~l~dG~l~v~GG~~~g~------~~v~~ydP~~~t~~W~~~~~~m~~~R~ 151 (539)
...+||+.+++-+.+...+... ...-++.+||+.++++...... ..+.++|.. +.+-..+...-....+
T Consensus 38 ~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~--~~~~~~l~~~~~~~~~ 115 (723)
T 1xfd_A 38 TVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIP--HGDPQSLDPPEVSNAK 115 (723)
T ss_dssp CEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESS--SCCCEECCCTTCCSCC
T ss_pred CEEEEECCCCcEEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEEECC--CCceEeccCCcccccc
Q ss_pred cceeEEccCCcEEEEcCccCCeEEEE-ecCCCcceeeccCccc---------------------cCCCCCCCCcceEEEe
Q 039705 152 FSTQHILPDGSFIVVGGRREFSYEYI-LKEGKRIIYDLPILNE---------------------TTNPSENNLYPFVFLS 209 (539)
Q Consensus 152 y~s~~~L~dG~VyvvGG~~~~~~E~y-P~~~~~~w~~~~~l~~---------------------~~~~~~~~~yp~~~~~ 209 (539)
-...+.-+||+.++.+.. ..+.++ ..++ +...+..... . ...-.
T Consensus 116 ~~~~~~SPdG~~la~~~~--~~i~~~~~~~g--~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~----------~~~~S 181 (723)
T 1xfd_A 116 LQYAGWGPKGQQLIFIFE--NNIYYCAHVGK--QAIRVVSTGKEGVIYNGLSDWLYEEEILKTHI----------AHWWS 181 (723)
T ss_dssp CSBCCBCSSTTCEEEEET--TEEEEESSSSS--CCEEEECCCBTTTEEEEECCHHHHHTTSSSSE----------EEEEC
T ss_pred ccccEECCCCCEEEEEEC--CeEEEEECCCC--ceEEEecCCCCCceECcccceeEEEEeccCcc----------eEEEC
Q ss_pred eCCcEEEEEcC------------------------------------ceeEeeCCCCeEEEEcccCCCCCCccCCCccEE
Q 039705 210 TDGNLFIFAND------------------------------------RSILLNPETNEILHVFPILRGGSRNYPASATSA 253 (539)
Q Consensus 210 ~~G~Iyv~Gg~------------------------------------~~e~yDp~tn~W~~~~p~mp~~~r~yp~~g~av 253 (539)
+||+.++++.. +..+||..+++-.+.+..-..............
T Consensus 182 pDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~ 261 (723)
T 1xfd_A 182 PDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVK 261 (723)
T ss_dssp TTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEE
T ss_pred CCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCccCCCccceeEEEE
Q ss_pred ecccccCCCCCCCcccEEEEecCCCCCcccccCCCcccccCCceEEEEeeCCCCceeee-ccCCCceec----eeEEecC
Q 039705 254 LLPIKLQDPNSNAIRAEVLICGGAKPEAGVLAGKGEFMNALQDCGRIEITNKSATWQRE-MMPSPRVMG----EMLLLPT 328 (539)
Q Consensus 254 ~lpl~~~~~~~~~~~g~Iyv~GG~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~-~M~~~R~~~----~~vvlpd 328 (539)
.-| +|+++++..... .....+..+|+. +.+.... .-....... .....||
T Consensus 262 ~Sp-----------Dg~~l~~~~~~~------------~~~~~i~~~d~~--~g~~~~~~~~~~~~~~~~~~~~~~~spd 316 (723)
T 1xfd_A 262 WAT-----------STKVAVTWLNRA------------QNVSILTLCDAT--TGVCTKKHEDESEAWLHRQNEEPVFSKD 316 (723)
T ss_dssp ESS-----------SSEEEEEEEETT------------SCEEEEEEEETT--TCCEEEEEEEECSSCCCCCCCCCEECTT
T ss_pred EeC-----------CCeEEEEEEcCC------------CCeEEEEEEeCC--CCcceEEEEeccCCEEeccCCCceEcCC
Q ss_pred CcEEEEc-CcCCC----CCCcccCCCCCCccEEEc-CCCCCCCc---eEecCCCCCCccceeeEeeCCCCeEEEecCCC
Q 039705 329 GDVLIIN-GAKKG----TAGWNFATDPNTTPVLYE-PDDPINER---FSELTPTSKPRMCHSTSVVLPDGKILVAGSNP 398 (539)
Q Consensus 329 G~I~vvG-G~~~g----~~g~~~~~~~~~~~e~Yd-P~t~~g~~---Wt~~a~~~~~R~yhs~a~llpdG~V~v~GG~~ 398 (539)
|+.+++. ....+ .. .+.+|| ..+. + ...+....... .+...+-|||+.++..+..
T Consensus 317 g~~l~~~~~~~~~~~~~~~----------~l~~~d~~~~~---~~~~~~~l~~~~~~~--~~~~~~spdg~~l~~~~~~ 380 (723)
T 1xfd_A 317 GRKFFFIRAIPQGGRGKFY----------HITVSSSQPNS---SNDNIQSITSGDWDV--TKILAYDEKGNKIYFLSTE 380 (723)
T ss_dssp SCSEEEEEEECCSSSSCEE----------EEEEECSSCCS---SSCCCCBSCCSSSCE--EEEEEEETTTTEEEEEESS
T ss_pred CCeEEEEEecccCCCccee----------EEEEEeccCCC---CccceeEeecCCeEE--EeeeEEcCCCCEEEEEEcC
No 221
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=71.05 E-value=1.1e+02 Score=32.44 Aligned_cols=101 Identities=9% Similarity=0.020 Sum_probs=50.8
Q ss_pred EEEEEC-CCCC--EEeCccCC-----Ccccc---cceecCCCcEEEecCCCCCCCeEEEEeCCCCccceeeccccccccc
Q 039705 82 AVEYDA-ESAA--IRPLKILT-----DTWSS---SGGLSANGTIVISGGWSSRGRSVRYLSGCYHACYWKEHHWELSAKR 150 (539)
Q Consensus 82 ~~~yDp-~t~~--w~~l~~~~-----~~~c~---~~~~l~dG~l~v~GG~~~g~~~v~~ydP~~~t~~W~~~~~~m~~~R 150 (539)
...+|+ ++++ |+.-.... ..+|. .+.++.+++||+.... ..+..+|..++...|+.-........
T Consensus 75 v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~d----g~l~alD~~tG~~~W~~~~~~~~~~~ 150 (571)
T 2ad6_A 75 TYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAYGAGQIVKKQAN----GHLLALDAKTGKINWEVEVCDPKVGS 150 (571)
T ss_dssp EEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECTT----SEEEEEETTTCCEEEEEECCCGGGTC
T ss_pred EEEEeCCCCccEEEEEcCCCCccccccccccccccccEEECCEEEEEeCC----CEEEEEECCCCCEEEEecCCCCCccc
Confidence 456777 6654 66432211 12332 2345567888876432 46888999754557875321111111
Q ss_pred ccceeEEccCCcEEEEcCcc----CCeEEEE-ecCCCccee
Q 039705 151 WFSTQHILPDGSFIVVGGRR----EFSYEYI-LKEGKRIIY 186 (539)
Q Consensus 151 ~y~s~~~L~dG~VyvvGG~~----~~~~E~y-P~~~~~~w~ 186 (539)
...+.-++.+|+||+..... ...+..| +++....|.
T Consensus 151 ~~~~~P~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~ 191 (571)
T 2ad6_A 151 TLTQAPFVAKDTVLMGCSGAELGVRGAVNAFDLKTGELKWR 191 (571)
T ss_dssp BCCSCCEEETTEEEEECBCGGGTCCCEEEEEETTTCCEEEE
T ss_pred eeccCCEEECCEEEEEecCCccCCCCEEEEEECCCCcEEEE
Confidence 11222234488888764321 2344555 555444564
No 222
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=70.66 E-value=1.2e+02 Score=32.83 Aligned_cols=116 Identities=13% Similarity=0.066 Sum_probs=59.6
Q ss_pred ecCCCcEEEecCCCCCCCeEEEEeCCCCccceeecccccccc-----c--ccceeEEccCCcEEEEcCccCCeEEEE-ec
Q 039705 108 LSANGTIVISGGWSSRGRSVRYLSGCYHACYWKEHHWELSAK-----R--WFSTQHILPDGSFIVVGGRREFSYEYI-LK 179 (539)
Q Consensus 108 ~l~dG~l~v~GG~~~g~~~v~~ydP~~~t~~W~~~~~~m~~~-----R--~y~s~~~L~dG~VyvvGG~~~~~~E~y-P~ 179 (539)
++.+|+||+.... ..+..+|..++...|+.-.. .... . ......++.+++||+.... ..+-.+ .+
T Consensus 74 ~v~~g~vyv~~~~----~~v~AlD~~tG~~~W~~~~~-~~~~~~~~~~~~~~~~~~a~~~~~v~v~~~d--g~l~alD~~ 146 (677)
T 1kb0_A 74 VVVDGIMYVSASW----SVVHAIDTRTGNRIWTYDPQ-IDRSTGFKGCCDVVNRGVALWKGKVYVGAWD--GRLIALDAA 146 (677)
T ss_dssp EEETTEEEEECGG----GCEEEEETTTTEEEEEECCC-CCGGGGGGSSSCSCCCCCEEETTEEEEECTT--SEEEEEETT
T ss_pred EEECCEEEEECCC----CeEEEEECCCCcEEEEEcCC-CCccccccccccCCCCCceEECCEEEEEcCC--CEEEEEECC
Confidence 4568899888652 46888998755567876432 1110 0 0111233457888886432 233344 44
Q ss_pred CCCcceeeccCccccCCCCCCCCcceEEEeeCCcEEEEEc-------CceeEeeCCCCe--EEE
Q 039705 180 EGKRIIYDLPILNETTNPSENNLYPFVFLSTDGNLFIFAN-------DRSILLNPETNE--ILH 234 (539)
Q Consensus 180 ~~~~~w~~~~~l~~~~~~~~~~~yp~~~~~~~G~Iyv~Gg-------~~~e~yDp~tn~--W~~ 234 (539)
++...|........... . ......++.+|+||+... ..+..||.++++ |..
T Consensus 147 tG~~~W~~~~~~~~~~~-~---~~~~~p~v~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~ 206 (677)
T 1kb0_A 147 TGKEVWHQNTFEGQKGS-L---TITGAPRVFKGKVIIGNGGAEYGVRGYITAYDAETGERKWRW 206 (677)
T ss_dssp TCCEEEEEETTTTCCSS-C---BCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEE
T ss_pred CCCEEeeecCCcCcCcC-c---ccccCcEEECCEEEEEecccccCCCCEEEEEECCCCcEEEEe
Confidence 44445643210000000 0 000113445888887643 347889998876 653
No 223
>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}
Probab=70.36 E-value=30 Score=34.83 Aligned_cols=73 Identities=12% Similarity=0.075 Sum_probs=38.4
Q ss_pred eceeEEecCCcEEEEcCcCCCCCCcccCCCCCCccEEEcCCCCCCCceEecCCCCCCccceeeEeeCCCCeEEEecCCCC
Q 039705 320 MGEMLLLPTGDVLIINGAKKGTAGWNFATDPNTTPVLYEPDDPINERFSELTPTSKPRMCHSTSVVLPDGKILVAGSNPH 399 (539)
Q Consensus 320 ~~~~vvlpdG~I~vvGG~~~g~~g~~~~~~~~~~~e~YdP~t~~g~~Wt~~a~~~~~R~yhs~a~llpdG~V~v~GG~~~ 399 (539)
.|..++.-||+||..|-...|.-|.+.. .....+..-+.-.+ .+...++ .-.+|+++ |..||+||.-|.+..
T Consensus 223 ~~t~~l~~~G~v~~wG~n~~GqLG~g~~-~~~~~p~~v~~~~~--~~v~~v~----~G~~hs~a-lt~~G~v~~wG~n~~ 294 (389)
T 3kci_A 223 AQTLCLTDDDTVWSWGDGDYGKLGRGGS-DGCKVPMKIDSLTG--LGVVKVE----CGSQFSVA-LTKSGAVYTWGKGDY 294 (389)
T ss_dssp CEEEEEETTTEEEEEECCGGGTTSSSSC-CCEEEEEECGGGTT--SCEEEEE----EETTEEEE-EETTSCEEEEECCGG
T ss_pred cEEEEEccCCEEEEEeCCCCCCCCCCCC-CCccccEEecccCC--CcEEEEe----CCCCEEEE-EeCCCeEEEEeCCCC
Confidence 3556677799999999655444332211 11111111111111 1233322 23467654 568999999999765
Q ss_pred C
Q 039705 400 S 400 (539)
Q Consensus 400 ~ 400 (539)
.
T Consensus 295 G 295 (389)
T 3kci_A 295 H 295 (389)
T ss_dssp G
T ss_pred C
Confidence 4
No 224
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=70.27 E-value=57 Score=34.80 Aligned_cols=122 Identities=7% Similarity=0.078 Sum_probs=63.2
Q ss_pred EeeCCcEEEEEc--CceeEeeC-CCCe--EEEEcccCCCCCCccC-----CCccEEecccccCCCCCCCcccEEEEecCC
Q 039705 208 LSTDGNLFIFAN--DRSILLNP-ETNE--ILHVFPILRGGSRNYP-----ASATSALLPIKLQDPNSNAIRAEVLICGGA 277 (539)
Q Consensus 208 ~~~~G~Iyv~Gg--~~~e~yDp-~tn~--W~~~~p~mp~~~r~yp-----~~g~av~lpl~~~~~~~~~~~g~Iyv~GG~ 277 (539)
++.+|+||+... ..+.++|. ++++ |..... .+...+.++ ..+.++ .+++||+...
T Consensus 59 ~v~~g~vyv~~~~~~~v~AlD~~~tG~~~W~~~~~-~~~~~~~~~~~~~~~~~~~~-------------~~~~v~v~~~- 123 (571)
T 2ad6_A 59 LVIGDMMYVHSAFPNNTYALNLNDPGKIVWQHKPK-QDASTKAVMCCDVVDRGLAY-------------GAGQIVKKQA- 123 (571)
T ss_dssp EEETTEEEEECSTTTCEEEEETTCTTSEEEEECCC-CCGGGGGGCTTCSCCCCCEE-------------ETTEEEEECT-
T ss_pred EEECCEEEEEeCCCCEEEEEeCCCCccEEEEEcCC-CCccccccccccccccccEE-------------ECCEEEEEeC-
Confidence 456999999876 45889999 7754 763221 111001000 011222 3788887643
Q ss_pred CCCcccccCCCcccccCCceEEEEeeCCCCceeee-cc-CCCceeceeEEecCCcEEEEcCcCCCCCCcccCCCCCCccE
Q 039705 278 KPEAGVLAGKGEFMNALQDCGRIEITNKSATWQRE-MM-PSPRVMGEMLLLPTGDVLIINGAKKGTAGWNFATDPNTTPV 355 (539)
Q Consensus 278 ~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~-~M-~~~R~~~~~vvlpdG~I~vvGG~~~g~~g~~~~~~~~~~~e 355 (539)
+ ..+..+|..+....|+.. .- ........+-++.+|+||+..... . ++ .--.+.
T Consensus 124 d----------------g~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~g~v~vg~~~~-~---~~----~~g~v~ 179 (571)
T 2ad6_A 124 N----------------GHLLALDAKTGKINWEVEVCDPKVGSTLTQAPFVAKDTVLMGCSGA-E---LG----VRGAVN 179 (571)
T ss_dssp T----------------SEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEEECBCG-G---GT----CCCEEE
T ss_pred C----------------CEEEEEECCCCCEEEEecCCCCCccceeccCCEEECCEEEEEecCC-c---cC----CCCEEE
Confidence 1 135678876545679864 21 111111122234489888754321 0 00 012578
Q ss_pred EEcCCCCCCCceEe
Q 039705 356 LYEPDDPINERFSE 369 (539)
Q Consensus 356 ~YdP~t~~g~~Wt~ 369 (539)
.||+++.+ ..|+.
T Consensus 180 a~D~~tG~-~~W~~ 192 (571)
T 2ad6_A 180 AFDLKTGE-LKWRA 192 (571)
T ss_dssp EEETTTCC-EEEEE
T ss_pred EEECCCCc-EEEEE
Confidence 99998862 25864
No 225
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=66.37 E-value=43 Score=31.81 Aligned_cols=68 Identities=13% Similarity=0.283 Sum_probs=36.7
Q ss_pred eeEEecCCcEEEEc---CcCCCCCCccc-CCCCCCccEEEcCCCCCCCceEecCCCCCCccceeeEeeCCCCe-EEEecC
Q 039705 322 EMLLLPTGDVLIIN---GAKKGTAGWNF-ATDPNTTPVLYEPDDPINERFSELTPTSKPRMCHSTSVVLPDGK-ILVAGS 396 (539)
Q Consensus 322 ~~vvlpdG~I~vvG---G~~~g~~g~~~-~~~~~~~~e~YdP~t~~g~~Wt~~a~~~~~R~yhs~a~llpdG~-V~v~GG 396 (539)
+.++-+||+||+.- |......+... .......+.+|||++. +++.+. ...+ -.+ .++.|||+ +|++..
T Consensus 135 ~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g---~~~~~~--~~~~-p~g-l~~spdg~~lyv~~~ 207 (305)
T 3dr2_A 135 DLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGS---PLQRMA--DLDH-PNG-LAFSPDEQTLYVSQT 207 (305)
T ss_dssp CEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSC---CCEEEE--EESS-EEE-EEECTTSSEEEEEEC
T ss_pred CEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCC---cEEEEe--cCCC-Ccc-eEEcCCCCEEEEEec
Confidence 35667899999973 22100000000 0011125789999888 777654 2211 123 34679997 777654
No 226
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=66.02 E-value=97 Score=29.81 Aligned_cols=84 Identities=10% Similarity=-0.097 Sum_probs=44.7
Q ss_pred EEEEECCCCCE-EeCccCCC----cccccceecCCCcEEEecCCCCCCCeEEEEeCCCCccceeecccccccccccceeE
Q 039705 82 AVEYDAESAAI-RPLKILTD----TWSSSGGLSANGTIVISGGWSSRGRSVRYLSGCYHACYWKEHHWELSAKRWFSTQH 156 (539)
Q Consensus 82 ~~~yDp~t~~w-~~l~~~~~----~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydP~~~t~~W~~~~~~m~~~R~y~s~~ 156 (539)
....|+.+++. +.+..... .+....+..+||+.+++....++...+.++|.. +.+...+.. - ..+......
T Consensus 12 ~~~~d~~~g~~~~~l~~~~~~~~~~~~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~--~~~~~~l~~-~-~~~~~~~~~ 87 (396)
T 3c5m_A 12 ETFVDSDTQVKVTRLTPTDIICHRNYFYQKCFTQDGKKLLFAGDFDGNRNYYLLNLE--TQQAVQLTE-G-KGDNTFGGF 87 (396)
T ss_dssp EEEECTTTCCEEEECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETT--TTEEEECCC-S-SCBCTTTCE
T ss_pred heeecCCCCcceEEEecCCCCccceeeecCcCCCCCCEEEEEEecCCCceEEEEECC--CCcEEEeec-C-CCCccccce
Confidence 34568887753 45543211 112334566899987776544445678888987 655554432 1 112122233
Q ss_pred EccCCcEEEEcCc
Q 039705 157 ILPDGSFIVVGGR 169 (539)
Q Consensus 157 ~L~dG~VyvvGG~ 169 (539)
.-+||+.++....
T Consensus 88 ~spdg~~l~~~~~ 100 (396)
T 3c5m_A 88 ISTDERAFFYVKN 100 (396)
T ss_dssp ECTTSSEEEEEET
T ss_pred ECCCCCEEEEEEc
Confidence 3457776655443
No 227
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=65.85 E-value=1.4e+02 Score=31.56 Aligned_cols=92 Identities=11% Similarity=0.054 Sum_probs=53.3
Q ss_pred eEEEEECC-CC---CEEeCccCCCcccccceecCCCcEEEecCCCCCCCeEEEEeCCCCccceeeccc---ccccccccc
Q 039705 81 LAVEYDAE-SA---AIRPLKILTDTWSSSGGLSANGTIVISGGWSSRGRSVRYLSGCYHACYWKEHHW---ELSAKRWFS 153 (539)
Q Consensus 81 ~~~~yDp~-t~---~w~~l~~~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydP~~~t~~W~~~~~---~m~~~R~y~ 153 (539)
...++|.. ++ +.+.+...+......-...+||++++++.. ++...+..+|+. +.++..+.. ....+.|.+
T Consensus 218 ~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l~~~~~~-~~~~~l~~~~~~--~~~~~~l~~~~~~~~~p~w~~ 294 (662)
T 3azo_A 218 ELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSLIVATDR-TGWWNLHRVDPA--TGAATQLCRREEEFAGPLWTP 294 (662)
T ss_dssp EEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSCEEEEECT-TSSCEEEEECTT--TCCEEESSCCSSBSSCCCCST
T ss_pred EEEEEEECCCCcccccEEeCCCCCceEcceEECCCCeEEEEECC-CCCeEEEEEECC--CCceeecccccccccCccccc
Confidence 45678888 56 444443322222223345689998877654 345578889987 677776543 111234432
Q ss_pred ---eeEEccCCcEEEEcCccCCeEEEE
Q 039705 154 ---TQHILPDGSFIVVGGRREFSYEYI 177 (539)
Q Consensus 154 ---s~~~L~dG~VyvvGG~~~~~~E~y 177 (539)
+.+..+||++++.+.. ....+|
T Consensus 295 ~~~~~~~~~~~~~~~~~~~--~~~~l~ 319 (662)
T 3azo_A 295 GMRWFAPLANGLIAVVHGK--GAAVLG 319 (662)
T ss_dssp TCCSEEECTTSCEEEEEBS--SSCEEE
T ss_pred cCceEeEeCCCEEEEEEEc--CccEEE
Confidence 3444568898888765 344555
No 228
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=64.06 E-value=1.1e+02 Score=29.58 Aligned_cols=60 Identities=10% Similarity=-0.020 Sum_probs=36.7
Q ss_pred ceecCCCcEEEecCCCCCCCeEEEEeCCCCccceeecccccccccccceeEEccCCcEEEEcCc
Q 039705 106 GGLSANGTIVISGGWSSRGRSVRYLSGCYHACYWKEHHWELSAKRWFSTQHILPDGSFIVVGGR 169 (539)
Q Consensus 106 ~~~l~dG~l~v~GG~~~g~~~v~~ydP~~~t~~W~~~~~~m~~~R~y~s~~~L~dG~VyvvGG~ 169 (539)
.+..+||+.+++....++...+.++|.. +.+-..+.. -.... ....+.-+||+.++....
T Consensus 41 ~~~SpDg~~l~~~~~~~g~~~l~~~d~~--~g~~~~lt~-~~~~~-~~~~~~spdg~~l~~~~~ 100 (388)
T 3pe7_A 41 KCFTRDGSKLLFGGAFDGPWNYYLLDLN--TQVATQLTE-GRGDN-TFGGFLSPDDDALFYVKD 100 (388)
T ss_dssp CCBCTTSCEEEEEECTTSSCEEEEEETT--TCEEEECCC-SSCBC-SSSCEECTTSSEEEEEET
T ss_pred ccCCCCCCEEEEEEcCCCCceEEEEeCC--CCceEEeee-CCCCC-ccceEEcCCCCEEEEEeC
Confidence 4567899988887764556678999987 665555432 21111 112345568876666553
No 229
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=63.95 E-value=62 Score=31.49 Aligned_cols=49 Identities=6% Similarity=-0.042 Sum_probs=32.1
Q ss_pred EEEEECCCCCEEe-CccC-CCcccccceecCCCcEEEecCCCCCCCeEEEEeCC
Q 039705 82 AVEYDAESAAIRP-LKIL-TDTWSSSGGLSANGTIVISGGWSSRGRSVRYLSGC 133 (539)
Q Consensus 82 ~~~yDp~t~~w~~-l~~~-~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydP~ 133 (539)
..+||..+.+... +... +.......+..+||+.+++|+.. ..+++||..
T Consensus 220 v~iwd~~~~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d---~~v~iw~~~ 270 (355)
T 3vu4_A 220 IRVFKTEDGVLVREFRRGLDRADVVDMKWSTDGSKLAVVSDK---WTLHVFEIF 270 (355)
T ss_dssp EEEEETTTCCEEEEEECTTCCSCEEEEEECTTSCEEEEEETT---CEEEEEESS
T ss_pred EEEEECCCCcEEEEEEcCCCCCcEEEEEECCCCCEEEEEECC---CEEEEEEcc
Confidence 6789998776543 2211 33333334566899999999863 678899875
No 230
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=63.41 E-value=50 Score=33.82 Aligned_cols=140 Identities=8% Similarity=0.071 Sum_probs=72.5
Q ss_pred cceEEEe-e---CCcEEEEEc-CceeEeeCCCCeEEEEcccCCCCCCccCCCccEEecccccCCCCCCCcccEEEEecCC
Q 039705 203 YPFVFLS-T---DGNLFIFAN-DRSILLNPETNEILHVFPILRGGSRNYPASATSALLPIKLQDPNSNAIRAEVLICGGA 277 (539)
Q Consensus 203 yp~~~~~-~---~G~Iyv~Gg-~~~e~yDp~tn~W~~~~p~mp~~~r~yp~~g~av~lpl~~~~~~~~~~~g~Iyv~GG~ 277 (539)
.|..+++ + +|+||+.-. ..+.++|+.+++.+.....+ .+| .+.+ +- .+++||++--.
T Consensus 140 ~P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~~~~~~-----~~P-~gia-vd-----------~dG~lyVad~~ 201 (433)
T 4hw6_A 140 NIWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDIKTTNI-----GQC-ADVN-FT-----------LNGDMVVVDDQ 201 (433)
T ss_dssp CCCEEEECTTTTTCEEEEECBTSCEEEEETTTTEEEEECCCC-----SCE-EEEE-EC-----------TTCCEEEEECC
T ss_pred CCceEEEccccCCCEEEEEeCCCCEEEEECCCCEEEEeecCC-----CCc-cEEE-EC-----------CCCCEEEEcCC
Confidence 4555544 3 389998744 67889999998887333211 122 1222 21 25668888532
Q ss_pred CCCcccccCCCcccccCCceEEEEeeCCCCcee---ee-ccCCCceeceeEEec-CCcEEEEcCcCCCCCCcccCCCCCC
Q 039705 278 KPEAGVLAGKGEFMNALQDCGRIEITNKSATWQ---RE-MMPSPRVMGEMLLLP-TGDVLIINGAKKGTAGWNFATDPNT 352 (539)
Q Consensus 278 ~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~---~~-~M~~~R~~~~~vvlp-dG~I~vvGG~~~g~~g~~~~~~~~~ 352 (539)
... ....+..++.. ..|. .. .+..++ +.++-+ +|.|||.--.+ .
T Consensus 202 ~~~------------~~~gv~~~~~~---~~~~~~~~~~~~~~P~---giavd~~~G~lyv~d~~~-------------~ 250 (433)
T 4hw6_A 202 SSD------------TNTGIYLFTRA---SGFTERLSLCNARGAK---TCAVHPQNGKIYYTRYHH-------------A 250 (433)
T ss_dssp SCT------------TSEEEEEECGG---GTTCCEEEEEECSSBC---CCEECTTTCCEEECBTTC-------------S
T ss_pred CCc------------ccceEEEEECC---CCeeccccccccCCCC---EEEEeCCCCeEEEEECCC-------------C
Confidence 200 01122333332 3332 12 333333 345567 89999854322 1
Q ss_pred ccEEEcCCCCCCCce-Eec-CCCCCCccceeeEeeCCCCe-EEEecC
Q 039705 353 TPVLYEPDDPINERF-SEL-TPTSKPRMCHSTSVVLPDGK-ILVAGS 396 (539)
Q Consensus 353 ~~e~YdP~t~~g~~W-t~~-a~~~~~R~yhs~a~llpdG~-V~v~GG 396 (539)
.+.+|||++. +. +.+ .....+..+ + .++-|||+ +||+=.
T Consensus 251 ~V~~~d~~~g---~~~~~~~~~~~~~~~~-~-ia~dpdG~~LYvad~ 292 (433)
T 4hw6_A 251 MISSYDPATG---TLTEEEVMMDTKGSNF-H-IVWHPTGDWAYIIYN 292 (433)
T ss_dssp EEEEECTTTC---CEEEEEEECSCCSSCE-E-EEECTTSSEEEEEET
T ss_pred EEEEEECCCC---eEEEEEeccCCCCCcc-c-EEEeCCCCEEEEEeC
Confidence 5789999876 54 222 111112222 2 34578887 999743
No 231
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=62.54 E-value=2.1e+02 Score=32.50 Aligned_cols=131 Identities=11% Similarity=0.040 Sum_probs=67.0
Q ss_pred EEECCCCCEEeCccCCCcccccceecCCCcEEEecCCCCCCCeEE-EEeCCCCccceeecccccccccccceeEEccCCc
Q 039705 84 EYDAESAAIRPLKILTDTWSSSGGLSANGTIVISGGWSSRGRSVR-YLSGCYHACYWKEHHWELSAKRWFSTQHILPDGS 162 (539)
Q Consensus 84 ~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~-~ydP~~~t~~W~~~~~~m~~~R~y~s~~~L~dG~ 162 (539)
++|..+.+.+.+...........+.. ||+.++++.. ...++ +||.. +.+...+.. ........+.-+||+
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~s-dg~~l~~~s~---~~~l~~~~d~~--~~~~~~l~~---~~~~~~~~~~SpDG~ 391 (1045)
T 1k32_A 321 IQDVSGTYVLKVPEPLRIRYVRRGGD-TKVAFIHGTR---EGDFLGIYDYR--TGKAEKFEE---NLGNVFAMGVDRNGK 391 (1045)
T ss_dssp EECTTSSBEEECSCCSCEEEEEECSS-SEEEEEEEET---TEEEEEEEETT--TCCEEECCC---CCCSEEEEEECTTSS
T ss_pred EEcCCCCceEEccCCCcceEEeeeEc-CCCeEEEEEC---CCceEEEEECC--CCCceEecC---CccceeeeEECCCCC
Confidence 44555555444432222122223345 8877776654 24677 88887 544433321 112223455667999
Q ss_pred EEEEcCccCCeEEEE-ecCCCcceeeccCccccCCCCCCCCcceEEEeeCCcEEEEEcC------------ceeEeeCCC
Q 039705 163 FIVVGGRREFSYEYI-LKEGKRIIYDLPILNETTNPSENNLYPFVFLSTDGNLFIFAND------------RSILLNPET 229 (539)
Q Consensus 163 VyvvGG~~~~~~E~y-P~~~~~~w~~~~~l~~~~~~~~~~~yp~~~~~~~G~Iyv~Gg~------------~~e~yDp~t 229 (539)
.++++..+ ..+.+| ..++ +.... +.... ...-.....+||+.+++++. .+.+||..+
T Consensus 392 ~la~~~~~-~~v~~~d~~tg--~~~~~--~~~~~-----~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~ 461 (1045)
T 1k32_A 392 FAVVANDR-FEIMTVDLETG--KPTVI--ERSRE-----AMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEG 461 (1045)
T ss_dssp EEEEEETT-SEEEEEETTTC--CEEEE--EECSS-----SCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTT
T ss_pred EEEEECCC-CeEEEEECCCC--ceEEe--ccCCC-----CCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCC
Confidence 88877654 355566 4433 22211 10100 00112345689987766532 577899988
Q ss_pred CeEE
Q 039705 230 NEIL 233 (539)
Q Consensus 230 n~W~ 233 (539)
++..
T Consensus 462 g~~~ 465 (1045)
T 1k32_A 462 RKIF 465 (1045)
T ss_dssp TEEE
T ss_pred CcEE
Confidence 8754
No 232
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=61.83 E-value=1.3e+02 Score=29.90 Aligned_cols=112 Identities=4% Similarity=-0.113 Sum_probs=54.0
Q ss_pred eecCCCc-EEEecCCCCCCCeEEEEeCCCC-ccceeeccc-cccc-ccccceeEEcc-CCcEEEEcCccCCeEEEE-ecC
Q 039705 107 GLSANGT-IVISGGWSSRGRSVRYLSGCYH-ACYWKEHHW-ELSA-KRWFSTQHILP-DGSFIVVGGRREFSYEYI-LKE 180 (539)
Q Consensus 107 ~~l~dG~-l~v~GG~~~g~~~v~~ydP~~~-t~~W~~~~~-~m~~-~R~y~s~~~L~-dG~VyvvGG~~~~~~E~y-P~~ 180 (539)
...+++. ++++|+.. ..+.+||.... ...+..... .+.. ...-.+.+..+ ++.++++|+.+ ..+.+| ..+
T Consensus 188 ~~~~~~~~~l~s~~~d---g~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~d-g~i~i~d~~~ 263 (430)
T 2xyi_A 188 SWNPNLNGYLLSASDD---HTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADD-QKLMIWDTRN 263 (430)
T ss_dssp EECTTSTTEEEEECTT---SCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETT-SEEEEEETTC
T ss_pred EeCCCCCCeEEEEeCC---CeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCC-CeEEEEECCC
Confidence 4456777 88888763 56889998620 112221110 0111 11112233344 57788887765 356667 433
Q ss_pred CCcceeeccCccccCCCCCCCCcc-eEEEeeCCc-EEEEEcC--ceeEeeCCC
Q 039705 181 GKRIIYDLPILNETTNPSENNLYP-FVFLSTDGN-LFIFAND--RSILLNPET 229 (539)
Q Consensus 181 ~~~~w~~~~~l~~~~~~~~~~~yp-~~~~~~~G~-Iyv~Gg~--~~e~yDp~t 229 (539)
. ........+.... ... .+...++++ +++.|+. .+.+||.++
T Consensus 264 ~-~~~~~~~~~~~~~------~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~ 309 (430)
T 2xyi_A 264 N-NTSKPSHTVDAHT------AEVNCLSFNPYSEFILATGSADKTVALWDLRN 309 (430)
T ss_dssp S-CSSSCSEEEECCS------SCEEEEEECSSCTTEEEEEETTSEEEEEETTC
T ss_pred C-CCCcceeEeecCC------CCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCC
Confidence 2 0011010011100 011 122345675 8888875 477899876
No 233
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=61.65 E-value=1.8e+02 Score=31.35 Aligned_cols=108 Identities=9% Similarity=0.062 Sum_probs=59.5
Q ss_pred EEecCCCCEEEEEccccCCCCCccCCCcccccCCCccccccccceeEEEEECCCCCEEeCccCCCcccccceecCCCcEE
Q 039705 36 IILFPNTNKAIMLDAVSLGPSNVRLPVGIYRLNPGAWQKYVDYRALAVEYDAESAAIRPLKILTDTWSSSGGLSANGTIV 115 (539)
Q Consensus 36 ~~ll~~~gkv~~~g~~~~~~~~~~~~~g~~~~~~~~~~g~~~~~~~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~l~ 115 (539)
.... +|||.+++.....|.. .....++|..+++..+..... ......+..+||+.+
T Consensus 130 ~~~S-PDg~~la~~~~~~G~~----------------------~~~i~v~d~~tg~~~~~~~~~-~~~~~~~wspDg~~l 185 (710)
T 2xdw_A 130 YAFS-EDGEYFAYGLSASGSD----------------------WVTIKFMKVDGAKELPDVLER-VKFSCMAWTHDGKGM 185 (710)
T ss_dssp EEEC-TTSSEEEEEEEETTCS----------------------CEEEEEEETTTTEEEEEEEEE-ECSCCEEECTTSSEE
T ss_pred EEEC-CCCCEEEEEEcCCCCc----------------------eEEEEEEECCCCCCCcccccC-cccceEEEEeCCCEE
Confidence 3444 8888887776442211 124668899999887653221 112234556799877
Q ss_pred EecCCCCC-------------CCeEEEEeCCCCcccee--ecccccccccccceeEEccCCcEEEEcCc
Q 039705 116 ISGGWSSR-------------GRSVRYLSGCYHACYWK--EHHWELSAKRWFSTQHILPDGSFIVVGGR 169 (539)
Q Consensus 116 v~GG~~~g-------------~~~v~~ydP~~~t~~W~--~~~~~m~~~R~y~s~~~L~dG~VyvvGG~ 169 (539)
+++..... ...+.+++.. +.+.. .+-..-....+..+...-+||+.+++...
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~--t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~ 252 (710)
T 2xdw_A 186 FYNAYPQQDGKSDGTETSTNLHQKLYYHVLG--TDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIR 252 (710)
T ss_dssp EEEECCCCSSCCSSSCCCCCCCCEEEEEETT--SCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEE
T ss_pred EEEEECCccccccccccccCCCCEEEEEECC--CCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEE
Confidence 77654321 2457778876 44321 11010112344455666779987776654
No 234
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=59.25 E-value=46 Score=31.37 Aligned_cols=101 Identities=15% Similarity=0.150 Sum_probs=59.3
Q ss_pred ceecCCCcEEEecCCCCCCCeEEEEeCC-CCccceeecccccccc---cccceeEEccCCcEEEEcCccCCeEEEE-ecC
Q 039705 106 GGLSANGTIVISGGWSSRGRSVRYLSGC-YHACYWKEHHWELSAK---RWFSTQHILPDGSFIVVGGRREFSYEYI-LKE 180 (539)
Q Consensus 106 ~~~l~dG~l~v~GG~~~g~~~v~~ydP~-~~t~~W~~~~~~m~~~---R~y~s~~~L~dG~VyvvGG~~~~~~E~y-P~~ 180 (539)
..+-+||.||++ . + -.+...+|- .+...|...+. .-.. +-++....-++|.||.+. ++.-+... |..
T Consensus 93 ~~fD~~G~LYav-~--d--G~iyr~~pP~~~~~~Wl~~a~-~vg~~gw~~~~~lff~p~G~Lyav~--dg~lyr~~~P~~ 164 (236)
T 1tl2_A 93 LFFDPNGYLYAV-S--K--DKLYKASPPQSDTDNWIARAT-EVGSGGWSGFKFLFFHPNGYLYAVH--GQQFYKALPPVS 164 (236)
T ss_dssp EEECTTSCEEEE-E--T--TEEEEESCCCSTTCCHHHHSE-EEECSSGGGEEEEEECTTSCEEEEE--TTEEEEECCCSS
T ss_pred EEECCCCCEEEe-C--C--CEEEEeCCCcCCCCceecccc-EeccCCCCceEEEEECCCceEEEEe--CCcEEecCCCCC
Confidence 345578999999 2 3 355556662 24668966543 2111 234566677899999999 33333344 543
Q ss_pred CCcceee-ccCccccCCCCCCCCcceEEEeeCCcEEEEE
Q 039705 181 GKRIIYD-LPILNETTNPSENNLYPFVFLSTDGNLFIFA 218 (539)
Q Consensus 181 ~~~~w~~-~~~l~~~~~~~~~~~yp~~~~~~~G~Iyv~G 218 (539)
....|.. ...+-+ ...+.|++.+..++|.||.+-
T Consensus 165 ~~~~wl~~~~~~g~----~g~~~yr~l~f~~~G~l~~v~ 199 (236)
T 1tl2_A 165 NQDNWLARATKIGQ----GGWDTFKFLFFSSVGTLFGVQ 199 (236)
T ss_dssp TTCCHHHHCEEEES----SSGGGEEEEEECTTSCEEEEE
T ss_pred CCcccccccceecc----CCcceEEEEEECCCCcEEEEe
Confidence 3446632 222211 224678887877899998875
No 235
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=58.62 E-value=2.1e+02 Score=31.14 Aligned_cols=132 Identities=11% Similarity=0.109 Sum_probs=67.5
Q ss_pred eCCcEEEEEc--CceeEeeCCCCeEEEEcccCCCCCCccCCCccEEecccccCCCCCCCcccEEEEecCCCCCcccccCC
Q 039705 210 TDGNLFIFAN--DRSILLNPETNEILHVFPILRGGSRNYPASATSALLPIKLQDPNSNAIRAEVLICGGAKPEAGVLAGK 287 (539)
Q Consensus 210 ~~G~Iyv~Gg--~~~e~yDp~tn~W~~~~p~mp~~~r~yp~~g~av~lpl~~~~~~~~~~~g~Iyv~GG~~~~~~~~~~~ 287 (539)
.+|+|++.++ ....+||++++++. .+..-....... -.+.+. + .+|+|++... .
T Consensus 481 ~~g~lWi~~~t~~Gl~~~d~~~~~~~-~~~~~~~~~~~~---~~~i~~--------d--~~g~lWigt~-~--------- 536 (758)
T 3ott_A 481 NEGNVWVLLYNNKGIDKINPRTREVT-KLFADELTGEKS---PNYLLC--------D--EDGLLWVGFH-G--------- 536 (758)
T ss_dssp TTSCEEEEETTCSSEEEEETTTTEEE-EECTTTSCGGGC---EEEEEE--------C--TTSCEEEEET-T---------
T ss_pred CCCCEEEEccCCCCcEEEeCCCCceE-EecCCCcCCCcc---cceEEE--------C--CCCCEEEEec-C---------
Confidence 3689998554 35788999999887 442100000011 112221 1 2688886432 1
Q ss_pred CcccccCCceEEEEeeCCCCceeee---ccCCCceeceeEEecCCcEEEEcCcCCCCCCcccCCCCCCccEEEcCCCCCC
Q 039705 288 GEFMNALQDCGRIEITNKSATWQRE---MMPSPRVMGEMLLLPTGDVLIINGAKKGTAGWNFATDPNTTPVLYEPDDPIN 364 (539)
Q Consensus 288 ~~~~~a~~s~~~~d~~~~~~~W~~~---~M~~~R~~~~~vvlpdG~I~vvGG~~~g~~g~~~~~~~~~~~e~YdP~t~~g 364 (539)
-+.+||+.. .+++.. .++..... +++-.+|+|++... + | ..+|||++.
T Consensus 537 --------Gl~~~~~~~--~~~~~~~~~gl~~~~i~--~i~~~~g~lWi~t~-~-G-------------l~~~~~~~~-- 587 (758)
T 3ott_A 537 --------GVMRINPKD--ESQQSISFGSFSNNEIL--SMTCVKNSIWVSTT-N-G-------------LWIIDRKTM-- 587 (758)
T ss_dssp --------EEEEECC----CCCCBCCCCC---CCEE--EEEEETTEEEEEES-S-C-------------EEEEETTTC--
T ss_pred --------ceEEEecCC--CceEEecccCCCccceE--EEEECCCCEEEECC-C-C-------------eEEEcCCCc--
Confidence 145677642 333321 34332222 23345888888442 2 2 478999998
Q ss_pred CceEecCCCCCCccceeeEeeCCCCeEEEecCC
Q 039705 365 ERFSELTPTSKPRMCHSTSVVLPDGKILVAGSN 397 (539)
Q Consensus 365 ~~Wt~~a~~~~~R~yhs~a~llpdG~V~v~GG~ 397 (539)
+++... ++.... .+.+....||++|+.|-+
T Consensus 588 -~~~~~~-~~~~~~-~~~~~~~~~G~l~fG~~~ 617 (758)
T 3ott_A 588 -DARQQN-MTNKRF-TSLLFDPKEDCVYLGGAD 617 (758)
T ss_dssp -CEEEC---CCCCC-SEEEEETTTTEEEEECBS
T ss_pred -eeEEec-CCCCce-eeeEEECCCCcEEEecCC
Confidence 777542 111122 234445579999987654
No 236
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=57.93 E-value=1.5e+02 Score=29.68 Aligned_cols=42 Identities=19% Similarity=0.101 Sum_probs=26.3
Q ss_pred ccEEEcCCCCCCCceE-ecCCCCCCccceeeEeeCCCCeEEEecCCCC
Q 039705 353 TPVLYEPDDPINERFS-ELTPTSKPRMCHSTSVVLPDGKILVAGSNPH 399 (539)
Q Consensus 353 ~~e~YdP~t~~g~~Wt-~~a~~~~~R~yhs~a~llpdG~V~v~GG~~~ 399 (539)
++-+||.++. +-. .+..-. ... .+.+..-|||+.+++|+.+.
T Consensus 306 TIkIWDl~tG---k~l~tL~gH~-~~v-vs~vafSPDG~~LaSGS~D~ 348 (356)
T 2w18_A 306 TIAIWDLLLG---QCTALLPPVS-DQH-WSFVKWSGTDSHLLAGQKDG 348 (356)
T ss_dssp CEEEEETTTC---SEEEEECCC---CC-CCEEEECSSSSEEEEECTTS
T ss_pred cEEEEECCCC---cEEEEecCCC-CCe-EEEEEECCCCCEEEEEECCC
Confidence 6889999988 533 332110 111 12345789999999998643
No 237
>4d9s_A UVB-resistance protein UVR8; UV resistance, UV-B photoreceptor, tryptophan chromophores, homodimer, COP1, chromatin-binding protein; 1.70A {Arabidopsis thaliana} PDB: 4dnw_A 4dnu_A 4dnv_A
Probab=56.77 E-value=47 Score=33.63 Aligned_cols=73 Identities=18% Similarity=0.173 Sum_probs=38.6
Q ss_pred eceeEEecCCcEEEEcCcCCCCCCcccCCCCCCccEEEcCCCCCCCceEecCCCCCCccceeeEeeCCCCeEEEecCCCC
Q 039705 320 MGEMLLLPTGDVLIINGAKKGTAGWNFATDPNTTPVLYEPDDPINERFSELTPTSKPRMCHSTSVVLPDGKILVAGSNPH 399 (539)
Q Consensus 320 ~~~~vvlpdG~I~vvGG~~~g~~g~~~~~~~~~~~e~YdP~t~~g~~Wt~~a~~~~~R~yhs~a~llpdG~V~v~GG~~~ 399 (539)
.|..++.-||+||..|-...|.-|.+.. .....+..-+.-.+ .+...++ .-.+|+++ |..||+||.-|.+..
T Consensus 235 ~ht~~l~~~G~v~~wG~n~~GqlG~g~~-~~~~~p~~v~~~~~--~~v~~i~----~G~~hs~a-lt~~G~v~~wG~n~~ 306 (406)
T 4d9s_A 235 RHTISVSYSGALYTYGWSKYGQLGHGDL-EDHLIPHKLEALSN--SFISQIS----GGWRHTMA-LTSDGKLYGWGWNKF 306 (406)
T ss_dssp SEEEEEETTCCEEEEECCTTSTTCSSSC-CCEEEEEECGGGTT--SCEEEEE----ECSSEEEE-EETTSCEEEEECCTT
T ss_pred CcEEEEcCCCCEEEeeCCCCCCCCCCCC-cCccccEEecccCC--CCEEEEE----ecCCEEEE-EcCCCeEEEeeCCCC
Confidence 3555667799999999655444332211 11111211111111 1333332 22457654 568999999998865
Q ss_pred C
Q 039705 400 S 400 (539)
Q Consensus 400 ~ 400 (539)
.
T Consensus 307 G 307 (406)
T 4d9s_A 307 G 307 (406)
T ss_dssp S
T ss_pred C
Confidence 5
No 238
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=55.41 E-value=1.5e+02 Score=31.79 Aligned_cols=112 Identities=7% Similarity=-0.008 Sum_probs=60.3
Q ss_pred cccceecCCCcEEEecCCCCCCCeEEEEeCCCCccce-----eecccccc-----cccccceeEEccCCcEEEEcCccCC
Q 039705 103 SSSGGLSANGTIVISGGWSSRGRSVRYLSGCYHACYW-----KEHHWELS-----AKRWFSTQHILPDGSFIVVGGRREF 172 (539)
Q Consensus 103 c~~~~~l~dG~l~v~GG~~~g~~~v~~ydP~~~t~~W-----~~~~~~m~-----~~R~y~s~~~L~dG~VyvvGG~~~~ 172 (539)
...-+..+||+.+++||.+ ..+++||.. ++.- ..+.. +. ...|-.+.+-.+|| +++++.+ .
T Consensus 132 v~svafSPDG~~LAsgs~D---GtVkIWd~~--~~~l~~~~~i~l~t-i~~~~~gh~~~V~sVawSPdg--Laass~D-~ 202 (588)
T 2j04_A 132 YHCFEWNPIESSIVVGNED---GELQFFSIR--KNSENTPEFYFESS-IRLSDAGSKDWVTHIVWYEDV--LVAALSN-N 202 (588)
T ss_dssp EEEEEECSSSSCEEEEETT---SEEEEEECC--CCTTTCCCCEEEEE-EECSCTTCCCCEEEEEEETTE--EEEEETT-C
T ss_pred EEEEEEcCCCCEEEEEcCC---CEEEEEECC--CCccccccceeeee-eecccccccccEEEEEEcCCc--EEEEeCC-C
Confidence 3345567899999999973 679999987 4421 11111 21 12355566667788 5666654 4
Q ss_pred eEEEE-ecCCCc--ceeeccCccccCCCCCCCCcceEEEeeCCcEEEEEc-CceeEeeCCCCeE
Q 039705 173 SYEYI-LKEGKR--IIYDLPILNETTNPSENNLYPFVFLSTDGNLFIFAN-DRSILLNPETNEI 232 (539)
Q Consensus 173 ~~E~y-P~~~~~--~w~~~~~l~~~~~~~~~~~yp~~~~~~~G~Iyv~Gg-~~~e~yDp~tn~W 232 (539)
++.+| ...+.. .+..+.. ..++. .. .+... |++.+.++ ..+.+||..++.-
T Consensus 203 tVrlWd~~~~~~~~~~~tL~~--~h~~~----V~--svaFs-g~~LASa~~~tIkLWd~~~~~~ 257 (588)
T 2j04_A 203 SVFSMTVSASSHQPVSRMIQN--ASRRK----IT--DLKIV-DYKVVLTCPGYVHKIDLKNYSI 257 (588)
T ss_dssp CEEEECCCSSSSCCCEEEEEC--CCSSC----CC--CEEEE-TTEEEEECSSEEEEEETTTTEE
T ss_pred eEEEEECCCCccccceeeecc--cccCc----EE--EEEEE-CCEEEEEeCCeEEEEECCCCeE
Confidence 56666 444310 1111110 11110 11 12222 45555554 5688999998875
No 239
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=54.32 E-value=2.4e+02 Score=30.58 Aligned_cols=100 Identities=11% Similarity=0.068 Sum_probs=49.6
Q ss_pred EEEEECCCCC--EEeCccCC-----Ccccc---cceecCCCcEEEecCCCCCCCeEEEEeCCCCccceeeccccccccc-
Q 039705 82 AVEYDAESAA--IRPLKILT-----DTWSS---SGGLSANGTIVISGGWSSRGRSVRYLSGCYHACYWKEHHWELSAKR- 150 (539)
Q Consensus 82 ~~~yDp~t~~--w~~l~~~~-----~~~c~---~~~~l~dG~l~v~GG~~~g~~~v~~ydP~~~t~~W~~~~~~m~~~R- 150 (539)
...+|.+|++ |+.-.... ..+|. .+.++.+++||+.... ..+..+|..++...|+.... ....+
T Consensus 82 v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~~~d----g~l~AlDa~TG~~~W~~~~~-~~~~~~ 156 (689)
T 1yiq_A 82 VYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAVWKGKVYVGVLD----GRLEAIDAKTGQRAWSVDTR-ADHKRS 156 (689)
T ss_dssp EEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECTT----SEEEEEETTTCCEEEEEECC-SCTTSC
T ss_pred EEEEECCCCceeEEEcCCCCccccccccccCCCCccEEECCEEEEEccC----CEEEEEECCCCCEeeeecCc-CCCCCC
Confidence 4567777664 65432211 12332 2334567777775432 46889999854567875321 01111
Q ss_pred c-cceeEEccCCcEEEEcCcc----CCeEEEE-ecCCCccee
Q 039705 151 W-FSTQHILPDGSFIVVGGRR----EFSYEYI-LKEGKRIIY 186 (539)
Q Consensus 151 ~-y~s~~~L~dG~VyvvGG~~----~~~~E~y-P~~~~~~w~ 186 (539)
+ ..++.++.+|+||+..+.. ...+..| ++++...|.
T Consensus 157 ~~~~~sP~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~ 198 (689)
T 1yiq_A 157 YTITGAPRVVNGKVVIGNGGAEFGVRGYVTAYDAETGKEAWR 198 (689)
T ss_dssp CBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEE
T ss_pred ccccCCcEEECCEEEEEeCCCccCCCCEEEEEECCCCcEEEE
Confidence 1 1222334488887743211 1234555 555534564
No 240
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=52.72 E-value=1.4e+02 Score=27.37 Aligned_cols=114 Identities=11% Similarity=0.053 Sum_probs=61.1
Q ss_pred cceecC-CCcEEEecCCCCCCCeEEEEeCCCCccceeeccc-ccccccccceeEEc-cC-CcEEEEcCccCCeEEEE-ec
Q 039705 105 SGGLSA-NGTIVISGGWSSRGRSVRYLSGCYHACYWKEHHW-ELSAKRWFSTQHIL-PD-GSFIVVGGRREFSYEYI-LK 179 (539)
Q Consensus 105 ~~~~l~-dG~l~v~GG~~~g~~~v~~ydP~~~t~~W~~~~~-~m~~~R~y~s~~~L-~d-G~VyvvGG~~~~~~E~y-P~ 179 (539)
+.++.+ +|+||++-... ....+.++++. ...-..+.. .+. .+...++ ++ +++|+.--. ...+.++ +.
T Consensus 126 ~i~vd~~~g~lyv~~~~~-~~~~I~~~~~d--g~~~~~~~~~~~~----~P~gia~d~~~~~lyv~d~~-~~~I~~~~~~ 197 (267)
T 1npe_A 126 GIVTDPVRGNLYWTDWNR-DNPKIETSHMD--GTNRRILAQDNLG----LPNGLTFDAFSSQLCWVDAG-THRAECLNPA 197 (267)
T ss_dssp EEEEETTTTEEEEEECCS-SSCEEEEEETT--SCCCEEEECTTCS----CEEEEEEETTTTEEEEEETT-TTEEEEEETT
T ss_pred EEEEeeCCCEEEEEECCC-CCcEEEEEecC--CCCcEEEEECCCC----CCcEEEEcCCCCEEEEEECC-CCEEEEEecC
Confidence 334445 58899885321 13578888886 322222211 122 2333334 33 578887533 2456666 43
Q ss_pred CCCcceeeccCccccCCCCCCCCcceEEEeeCCcEEEEEc--CceeEeeCCCCeEEEEcc
Q 039705 180 EGKRIIYDLPILNETTNPSENNLYPFVFLSTDGNLFIFAN--DRSILLNPETNEILHVFP 237 (539)
Q Consensus 180 ~~~~~w~~~~~l~~~~~~~~~~~yp~~~~~~~G~Iyv~Gg--~~~e~yDp~tn~W~~~~p 237 (539)
.. .-.. .+.. ..+|..+..-+++||+.-. +.+.++|+.+++..+.++
T Consensus 198 g~--~~~~--~~~~-------~~~P~gi~~d~~~lyva~~~~~~v~~~d~~~g~~~~~i~ 246 (267)
T 1npe_A 198 QP--GRRK--VLEG-------LQYPFAVTSYGKNLYYTDWKTNSVIAMDLAISKEMDTFH 246 (267)
T ss_dssp EE--EEEE--EEEC-------CCSEEEEEEETTEEEEEETTTTEEEEEETTTTEEEEEEC
T ss_pred CC--ceEE--EecC-------CCCceEEEEeCCEEEEEECCCCeEEEEeCCCCCceEEEc
Confidence 21 1111 1111 1256666666788998753 568899999888765554
No 241
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=50.12 E-value=2.3e+02 Score=30.80 Aligned_cols=126 Identities=8% Similarity=-0.024 Sum_probs=62.7
Q ss_pred EEEEECCCCCEEeCccC--C-CcccccceecCCCcEEEecCCCCCCCeEEEEeCCCCccceeeccc-ccccccccceeEE
Q 039705 82 AVEYDAESAAIRPLKIL--T-DTWSSSGGLSANGTIVISGGWSSRGRSVRYLSGCYHACYWKEHHW-ELSAKRWFSTQHI 157 (539)
Q Consensus 82 ~~~yDp~t~~w~~l~~~--~-~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydP~~~t~~W~~~~~-~m~~~R~y~s~~~ 157 (539)
..+||+++++++.+... . ...........+|+|++.. . ..+.+|||. +.++..... .|+... ..+..
T Consensus 495 l~~~d~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~lWigt-~----~Gl~~~~~~--~~~~~~~~~~gl~~~~--i~~i~ 565 (758)
T 3ott_A 495 IDKINPRTREVTKLFADELTGEKSPNYLLCDEDGLLWVGF-H----GGVMRINPK--DESQQSISFGSFSNNE--ILSMT 565 (758)
T ss_dssp EEEEETTTTEEEEECTTTSCGGGCEEEEEECTTSCEEEEE-T----TEEEEECC----CCCCBCCCCC---CC--EEEEE
T ss_pred cEEEeCCCCceEEecCCCcCCCcccceEEECCCCCEEEEe-c----CceEEEecC--CCceEEecccCCCccc--eEEEE
Confidence 35689998888876321 1 1111112233578888753 2 348889998 666654321 143222 12223
Q ss_pred ccCCcEEEEcCccCCeEEEE-ecCCCcceeeccCccccCCCCCCCCcceEEE-eeCCcEEEEEcCceeEeeCCC
Q 039705 158 LPDGSFIVVGGRREFSYEYI-LKEGKRIIYDLPILNETTNPSENNLYPFVFL-STDGNLFIFANDRSILLNPET 229 (539)
Q Consensus 158 L~dG~VyvvGG~~~~~~E~y-P~~~~~~w~~~~~l~~~~~~~~~~~yp~~~~-~~~G~Iyv~Gg~~~e~yDp~t 229 (539)
-.+|++++... ..+-+| |++. +..... +.. +.+...+. ..+|+||+-+.+..-+|||+.
T Consensus 566 ~~~g~lWi~t~---~Gl~~~~~~~~--~~~~~~-~~~-------~~~~~~~~~~~~G~l~fG~~~Gl~~f~p~~ 626 (758)
T 3ott_A 566 CVKNSIWVSTT---NGLWIIDRKTM--DARQQN-MTN-------KRFTSLLFDPKEDCVYLGGADGFGISHSNL 626 (758)
T ss_dssp EETTEEEEEES---SCEEEEETTTC--CEEEC---CC-------CCCSEEEEETTTTEEEEECBSEEEEEEC--
T ss_pred ECCCCEEEECC---CCeEEEcCCCc--eeEEec-CCC-------CceeeeEEECCCCcEEEecCCceEEEChhh
Confidence 34788887552 224566 7654 332211 111 11222222 348998877667778899974
No 242
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=49.84 E-value=2.8e+02 Score=30.01 Aligned_cols=143 Identities=8% Similarity=-0.026 Sum_probs=67.9
Q ss_pred eEEEEECCCCCEEeCccCCCcccccceecCCCcEEEecCCCCC-----------CCeEEEEeCCCCccce--eecccccc
Q 039705 81 LAVEYDAESAAIRPLKILTDTWSSSGGLSANGTIVISGGWSSR-----------GRSVRYLSGCYHACYW--KEHHWELS 147 (539)
Q Consensus 81 ~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~l~v~GG~~~g-----------~~~v~~ydP~~~t~~W--~~~~~~m~ 147 (539)
...++|..+++..+.... .......+..+| +-++++..... ...+.+++.. +..- ..+-..-.
T Consensus 190 ~i~v~dl~tg~~~~~~~~-~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lg--t~~~~~~lv~~~~~ 265 (741)
T 1yr2_A 190 TVKFVGVADGKPLADELK-WVKFSGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLG--TPQSADQPVFATPE 265 (741)
T ss_dssp EEEEEETTTCCEEEEEEE-EEESCCCEESTT-SEEEEEECCCC--------CCCCCEEEEEETT--SCGGGCEEEECCTT
T ss_pred EEEEEECCCCCCCCccCC-CceeccEEEECC-CEEEEEEecCcccccccccCCCCCEEEEEECC--CCchhCEEEeccCC
Confidence 466889999988664221 111123455678 65555543221 2356777764 3221 11111011
Q ss_pred cccccceeEEccCCcEEEEcCccC--CeEEEE--ecCCC-cc-eeeccCccccCCCCCCCCcceEEEeeCCc-EEEEEcC
Q 039705 148 AKRWFSTQHILPDGSFIVVGGRRE--FSYEYI--LKEGK-RI-IYDLPILNETTNPSENNLYPFVFLSTDGN-LFIFAND 220 (539)
Q Consensus 148 ~~R~y~s~~~L~dG~VyvvGG~~~--~~~E~y--P~~~~-~~-w~~~~~l~~~~~~~~~~~yp~~~~~~~G~-Iyv~Gg~ 220 (539)
.+++..+...-+||+.+++...+. ...++| +.... .. +..+. ...+ ...+ .+.++|+ ||+..+.
T Consensus 266 ~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~---~~~~---~~~~---~~~~dg~~l~~~s~~ 336 (741)
T 1yr2_A 266 LPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALI---PDLK---AQWD---FVDGVGDQLWFVSGD 336 (741)
T ss_dssp CTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEE---CSSS---SCEE---EEEEETTEEEEEECT
T ss_pred CCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEec---CCCC---ceEE---EEeccCCEEEEEECC
Confidence 223445566677998666655432 233454 33221 12 43221 1111 1122 2346666 4444432
Q ss_pred -----ceeEeeCCC--CeEEEEc
Q 039705 221 -----RSILLNPET--NEILHVF 236 (539)
Q Consensus 221 -----~~e~yDp~t--n~W~~~~ 236 (539)
...++|..+ ..|...+
T Consensus 337 ~~~~~~l~~~d~~~~~~~~~~l~ 359 (741)
T 1yr2_A 337 GAPLKKIVRVDLSGSTPRFDTVV 359 (741)
T ss_dssp TCTTCEEEEEECSSSSCEEEEEE
T ss_pred CCCCCEEEEEeCCCCccccEEEe
Confidence 266788777 5787433
No 243
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=49.02 E-value=2e+02 Score=30.55 Aligned_cols=27 Identities=22% Similarity=0.420 Sum_probs=21.1
Q ss_pred EeeCCcEEEEEc-CceeEeeCCCCe--EEE
Q 039705 208 LSTDGNLFIFAN-DRSILLNPETNE--ILH 234 (539)
Q Consensus 208 ~~~~G~Iyv~Gg-~~~e~yDp~tn~--W~~ 234 (539)
++.+|+||+... ..+.++|.++++ |..
T Consensus 65 ~v~~g~vyv~~~~~~v~AlD~~tG~~~W~~ 94 (582)
T 1flg_A 65 IVSDGVIYVTASYSRLFALDAKTGKRLWTY 94 (582)
T ss_dssp EEETTEEEEEETTTEEEEEESSSCCEEEEE
T ss_pred EEECCEEEEEcCCCCEEEEECCCCcEEEEE
Confidence 457999999987 558889998765 764
No 244
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=48.85 E-value=1.9e+02 Score=27.86 Aligned_cols=49 Identities=6% Similarity=-0.058 Sum_probs=25.2
Q ss_pred eEEEEECC-CCCEEeCccC---C-CcccccceecCCCcEEEecCCCCCCCeEEEEe
Q 039705 81 LAVEYDAE-SAAIRPLKIL---T-DTWSSSGGLSANGTIVISGGWSSRGRSVRYLS 131 (539)
Q Consensus 81 ~~~~yDp~-t~~w~~l~~~---~-~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~yd 131 (539)
...+||.. +++.+.+... . .....+.++.+||+.+.+.... ...+.+|+
T Consensus 168 ~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~--~~~v~v~~ 221 (365)
T 1jof_A 168 KLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEA--GNRICEYV 221 (365)
T ss_dssp EEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETT--TTEEEEEE
T ss_pred EEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECC--CCeEEEEE
Confidence 35678877 6666543211 1 1112233567899765554432 24666664
No 245
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=47.54 E-value=3e+02 Score=29.71 Aligned_cols=101 Identities=10% Similarity=0.040 Sum_probs=49.3
Q ss_pred EEEEECCCCC--EEeCccCC-----Ccccc---cceecCCCcEEEecCCCCCCCeEEEEeCCCCccceeeccc-cccccc
Q 039705 82 AVEYDAESAA--IRPLKILT-----DTWSS---SGGLSANGTIVISGGWSSRGRSVRYLSGCYHACYWKEHHW-ELSAKR 150 (539)
Q Consensus 82 ~~~yDp~t~~--w~~l~~~~-----~~~c~---~~~~l~dG~l~v~GG~~~g~~~v~~ydP~~~t~~W~~~~~-~m~~~R 150 (539)
...+|.+|++ |+.-.... ..+|. .+.++.+++||+.... ..+..+|..++...|+.-.. ......
T Consensus 89 v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~v~~~d----g~l~alD~~tG~~~W~~~~~~~~~~~~ 164 (677)
T 1kb0_A 89 VHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALWKGKVYVGAWD----GRLIALDAATGKEVWHQNTFEGQKGSL 164 (677)
T ss_dssp EEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEEETTEEEEECTT----SEEEEEETTTCCEEEEEETTTTCCSSC
T ss_pred EEEEECCCCcEEEEEcCCCCccccccccccCCCCCceEECCEEEEEcCC----CEEEEEECCCCCEEeeecCCcCcCcCc
Confidence 4457777664 65432211 11231 2344567777776432 46888999754556875321 010001
Q ss_pred ccceeEEccCCcEEEEcCcc----CCeEEEE-ecCCCccee
Q 039705 151 WFSTQHILPDGSFIVVGGRR----EFSYEYI-LKEGKRIIY 186 (539)
Q Consensus 151 ~y~s~~~L~dG~VyvvGG~~----~~~~E~y-P~~~~~~w~ 186 (539)
...+.-++.+|+||+..+.. ...+..| .+++...|.
T Consensus 165 ~~~~~p~v~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~ 205 (677)
T 1kb0_A 165 TITGAPRVFKGKVIIGNGGAEYGVRGYITAYDAETGERKWR 205 (677)
T ss_dssp BCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEE
T ss_pred ccccCcEEECCEEEEEecccccCCCCEEEEEECCCCcEEEE
Confidence 11223334478887754321 1344555 555434564
No 246
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=47.19 E-value=1.8e+02 Score=30.59 Aligned_cols=90 Identities=13% Similarity=0.032 Sum_probs=49.2
Q ss_pred eEEEEECCCCCEEeCccCCCcc--------cccceecCCCcEEEecCCCCCCCeEEEEeCCCCccceeeccccccccccc
Q 039705 81 LAVEYDAESAAIRPLKILTDTW--------SSSGGLSANGTIVISGGWSSRGRSVRYLSGCYHACYWKEHHWELSAKRWF 152 (539)
Q Consensus 81 ~~~~yDp~t~~w~~l~~~~~~~--------c~~~~~l~dG~l~v~GG~~~g~~~v~~ydP~~~t~~W~~~~~~m~~~R~y 152 (539)
....+|+.+++++.+....... ....+...+|++++.+.. +...+..+|.. +.....+.. .. ...
T Consensus 266 ~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~d~~--~~~~~~l~~--~~-~~~ 338 (662)
T 3azo_A 266 NLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGK--GAAVLGILDPE--SGELVDAAG--PW-TEW 338 (662)
T ss_dssp EEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS--SSCEEEEEETT--TTEEEECCS--SC-CEE
T ss_pred EEEEEECCCCceeecccccccccCccccccCceEeEeCCCEEEEEEEc--CccEEEEEECC--CCcEEEecC--CC-CeE
Confidence 4567888888888876542211 112233468999888765 55677777886 555555432 11 111
Q ss_pred ceeEEccCCcEEEEcCccCCeEEEE
Q 039705 153 STQHILPDGSFIVVGGRREFSYEYI 177 (539)
Q Consensus 153 ~s~~~L~dG~VyvvGG~~~~~~E~y 177 (539)
.......+++++++.+......++|
T Consensus 339 ~~~~s~~~~~~~~~~~~~~~~~~i~ 363 (662)
T 3azo_A 339 AATLTVSGTRAVGVAASPRTAYEVV 363 (662)
T ss_dssp EEEEEEETTEEEEEEEETTEEEEEE
T ss_pred EEEEecCCCEEEEEEcCCCCCCEEE
Confidence 2221333455666665544344555
No 247
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=46.95 E-value=66 Score=31.91 Aligned_cols=50 Identities=10% Similarity=-0.042 Sum_probs=31.9
Q ss_pred eEEEEECCCCCEEeCccC--CCcccccceecCCCcEEEecCCCCCCCeEEEEeCC
Q 039705 81 LAVEYDAESAAIRPLKIL--TDTWSSSGGLSANGTIVISGGWSSRGRSVRYLSGC 133 (539)
Q Consensus 81 ~~~~yDp~t~~w~~l~~~--~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydP~ 133 (539)
...+||..+.+....-.. +......-++.++|+++++|+.. ..+++||..
T Consensus 193 ~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d---g~i~iwd~~ 244 (437)
T 3gre_A 193 RVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTR---GIIDIWDIR 244 (437)
T ss_dssp EEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETT---SCEEEEETT
T ss_pred eEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCC---CeEEEEEcC
Confidence 366889887765332221 22222233456789999999863 578999987
No 248
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=46.38 E-value=72 Score=30.34 Aligned_cols=80 Identities=14% Similarity=0.131 Sum_probs=44.4
Q ss_pred ceEEEEeeCCCCceeee-ccCCCceeceeEEecCCcEEEEcCcCCCCCCcccCCCCCCccEEEcCCCCCCCceEecCCCC
Q 039705 296 DCGRIEITNKSATWQRE-MMPSPRVMGEMLLLPTGDVLIINGAKKGTAGWNFATDPNTTPVLYEPDDPINERFSELTPTS 374 (539)
Q Consensus 296 s~~~~d~~~~~~~W~~~-~M~~~R~~~~~vvlpdG~I~vvGG~~~g~~g~~~~~~~~~~~e~YdP~t~~g~~Wt~~a~~~ 374 (539)
.+.+||+. .+.... ..+ .+ -++.++-+||++||......+ ..+..||+.+. +.+.+...+
T Consensus 54 ~I~~~d~~---g~~~~~~~~~-~~-p~gia~~~dG~l~vad~~~~~-----------~~v~~~d~~~g---~~~~~~~~~ 114 (306)
T 2p4o_A 54 EIVSITPD---GNQQIHATVE-GK-VSGLAFTSNGDLVATGWNADS-----------IPVVSLVKSDG---TVETLLTLP 114 (306)
T ss_dssp EEEEECTT---CCEEEEEECS-SE-EEEEEECTTSCEEEEEECTTS-----------CEEEEEECTTS---CEEEEEECT
T ss_pred eEEEECCC---CceEEEEeCC-CC-ceeEEEcCCCcEEEEeccCCc-----------ceEEEEcCCCC---eEEEEEeCC
Confidence 35667653 233322 322 12 234455689999997643210 13667888887 777665544
Q ss_pred CCccceeeEeeCCCCeEEEec
Q 039705 375 KPRMCHSTSVVLPDGKILVAG 395 (539)
Q Consensus 375 ~~R~yhs~a~llpdG~V~v~G 395 (539)
..|.-.+.+. .+++++|++-
T Consensus 115 ~~~~~~g~~~-~~~~~~~v~d 134 (306)
T 2p4o_A 115 DAIFLNGITP-LSDTQYLTAD 134 (306)
T ss_dssp TCSCEEEEEE-SSSSEEEEEE
T ss_pred CccccCcccc-cCCCcEEEEE
Confidence 4455455543 4566677654
No 249
>1w8o_A Bacterial sialidase; 3D-structure, glycosidase, hydrolase, beta- propeller; HET: LBT CIT; 1.70A {Micromonospora viridifaciens} SCOP: b.1.18.2 b.18.1.1 b.68.1.1 PDB: 1w8n_A* 1eut_A 1euu_A* 1wcq_A* 2bzd_A* 2ber_A* 1eur_A 1eus_A*
Probab=41.80 E-value=86 Score=33.34 Aligned_cols=125 Identities=6% Similarity=-0.035 Sum_probs=63.8
Q ss_pred CCCEEeCccCCCcccccce-ecCCCcEEEecCCCCCCCeEEEEeCCCCccceeeccc--ccccccccceeEEc-------
Q 039705 89 SAAIRPLKILTDTWSSSGG-LSANGTIVISGGWSSRGRSVRYLSGCYHACYWKEHHW--ELSAKRWFSTQHIL------- 158 (539)
Q Consensus 89 t~~w~~l~~~~~~~c~~~~-~l~dG~l~v~GG~~~g~~~v~~ydP~~~t~~W~~~~~--~m~~~R~y~s~~~L------- 158 (539)
-.+|+.........|...+ .+.||+|++..-.........++--.++..+|++... .|+.+....+...+
T Consensus 199 G~TW~~~~~~~~~~~~~~v~~~~dG~l~~~~r~~~~~~~~~~~~S~DgG~tW~~~~~~~~l~~p~~~~s~~~~~~~~~~~ 278 (601)
T 1w8o_A 199 GRTWRAGEAVGVGMDENKTVELSDGRVLLNSRDSARSGYRKVAVSTDGGHSYGPVTIDRDLPDPTNNASIIRAFPDAPAG 278 (601)
T ss_dssp TSSCEECCCBCSSCCSEEEEECTTSCEEEEECCTTCCSEEEEEEESSTTSCCCCCEEEEEEECSSCCCEEEESSTTCCTT
T ss_pred CcCccCCCCCCCCCCcCEEEEeCCCEEEEEEeCCCCCCCEEEEEEcCCCCCCCCCeecCcCCCCCccceEEEecccccCC
Confidence 3578877654433333333 3568999886532211122333333223578987631 25555544444333
Q ss_pred -cCCcEEEEcCccC----CeEEEE-ecCCCcceeeccCccccCCCCCCCCcceEEEeeCCcEEEEE
Q 039705 159 -PDGSFIVVGGRRE----FSYEYI-LKEGKRIIYDLPILNETTNPSENNLYPFVFLSTDGNLFIFA 218 (539)
Q Consensus 159 -~dG~VyvvGG~~~----~~~E~y-P~~~~~~w~~~~~l~~~~~~~~~~~yp~~~~~~~G~Iyv~G 218 (539)
.++.+++++.... ....++ ...+..+|.....+... ...||.+..+.||+|+++.
T Consensus 279 ~~~~~~l~~~~~~~~~~R~~~~l~~S~D~G~tW~~~~~l~~~-----~~~Y~~l~~~~dg~i~~~y 339 (601)
T 1w8o_A 279 SARAKVLLFSNAASQTSRSQGTIRMSCDDGQTWPVSKVFQPG-----SMSYSTLTALPDGTYGLLY 339 (601)
T ss_dssp CSGGGCEEEEEECCSSSSEEEEEEEESSTTSCCCEEEEEEEE-----ECCCEEEEECTTSCEEEEE
T ss_pred CCCCCEEEEECCCCCCcccceEEEEeCCCCCCCCCceEeCCC-----CCCCCeEEEcCCCeEEEEE
Confidence 2445555554321 123455 44335678543222221 1348887788899999874
No 250
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=40.95 E-value=3.9e+02 Score=29.10 Aligned_cols=138 Identities=14% Similarity=0.120 Sum_probs=66.0
Q ss_pred EEEEECCCCCEEeCccCC-------CcccccceecCCCcEEEecCCCCCCCeEEEEeCCCCccceeeccc------cccc
Q 039705 82 AVEYDAESAAIRPLKILT-------DTWSSSGGLSANGTIVISGGWSSRGRSVRYLSGCYHACYWKEHHW------ELSA 148 (539)
Q Consensus 82 ~~~yDp~t~~w~~l~~~~-------~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydP~~~t~~W~~~~~------~m~~ 148 (539)
..+||+.+++++...... ...-..-....+|.|++.- . ..+.+||+. +.++..... .+..
T Consensus 237 l~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWigt-~----~Gl~~~~~~--~~~~~~~~~~~~~~~~l~~ 309 (795)
T 4a2l_A 237 LFLINPKTKEIKNYLHSPSNPKSISSNYIRSLAMDSQNRLWIGT-F----NDLNIYHEG--TDSFASYSSNPVENGSLSQ 309 (795)
T ss_dssp EEEEETTTTEEEEECCCTTCTTSCSCSBEEEEEECTTSCEEEEE-S----SCEEEEETT--TTEEEEECCCTTSTTSCSS
T ss_pred eEEEeCCCCeEEEeecCCCCccccCCCeEEEEEEcCCCCEEEEe-C----ChhheEcCC--CCeEEEEecCCCCCCCCCC
Confidence 346888888887654221 1111111223468877643 1 247889998 777765432 1222
Q ss_pred ccccceeEEccCCcEEEEcCccCCeEEEE-ecCCCcceeeccCccccCCCCCCCCcceEEE-eeCCcEEEEEcC-ceeEe
Q 039705 149 KRWFSTQHILPDGSFIVVGGRREFSYEYI-LKEGKRIIYDLPILNETTNPSENNLYPFVFL-STDGNLFIFAND-RSILL 225 (539)
Q Consensus 149 ~R~y~s~~~L~dG~VyvvGG~~~~~~E~y-P~~~~~~w~~~~~l~~~~~~~~~~~yp~~~~-~~~G~Iyv~Gg~-~~e~y 225 (539)
.. -.+...=.+|.++|- .....+.+| +.++ .+......... .....+ .-.+++ -.+|+|++-... ...+|
T Consensus 310 ~~-i~~i~~D~~g~lWig--t~~~Gl~~~~~~~~--~~~~~~~~~~~-~~l~~~-~V~~i~~d~~g~lWiGt~~~Gl~~~ 382 (795)
T 4a2l_A 310 RS-VRSIFMDSQGGMWLG--TYFGGLNYYHPIRN--RFKNIRNIPYK-NSLSDN-VVSCIVEDKDKNLWIGTNDGGLNLY 382 (795)
T ss_dssp SC-EEEEEECTTSCEEEE--ESSSCEEEECGGGG--SSEEECCCTTS-SSCSCS-SEEEEEECTTSCEEEEESSSCEEEE
T ss_pred Cc-EEEEEEeCCcCEEEE--ECCCCeEEeCCCcc--cceEEcCCCCC-CCCCCC-eeEEEEECCCCCEEEEECCCCeEEE
Confidence 22 122333346788773 111224455 4433 33211110000 000011 111122 236888875433 57889
Q ss_pred eCCCCeEE
Q 039705 226 NPETNEIL 233 (539)
Q Consensus 226 Dp~tn~W~ 233 (539)
|+.++++.
T Consensus 383 ~~~~~~~~ 390 (795)
T 4a2l_A 383 NPITQRFT 390 (795)
T ss_dssp CTTTCCEE
T ss_pred cCCCCcEE
Confidence 99999886
No 251
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=37.46 E-value=2.2e+02 Score=28.72 Aligned_cols=59 Identities=12% Similarity=0.074 Sum_probs=33.5
Q ss_pred cccceecC-CCcEEEecCCCCCCCeEEEEeCCCCccceeecccccccccccceeEEccCCc-EEEEc
Q 039705 103 SSSGGLSA-NGTIVISGGWSSRGRSVRYLSGCYHACYWKEHHWELSAKRWFSTQHILPDGS-FIVVG 167 (539)
Q Consensus 103 c~~~~~l~-dG~l~v~GG~~~g~~~v~~ydP~~~t~~W~~~~~~m~~~R~y~s~~~L~dG~-VyvvG 167 (539)
+.+.++.+ +|.||++-- +...+.+||+. +..-..+.. +....|-...+.-++|+ +|++-
T Consensus 228 p~giavdp~~g~lyv~d~---~~~~V~~~~~~--~~~~~~~~~-~~~~~~P~gia~~pdG~~lyv~d 288 (430)
T 3tc9_A 228 CNGAETHPINGELYFNSW---NAGQVFRYDFT--TQETTPLFT-IQDSGWEFHIQFHPSGNYAYIVV 288 (430)
T ss_dssp CCCEEECTTTCCEEEEET---TTTEEEEEETT--TTEEEEEEE-CSSSSCCEEEEECTTSSEEEEEE
T ss_pred ceEEEEeCCCCEEEEEEC---CCCEEEEEECC--CCcEEEEEE-cCCCCcceeEEEcCCCCEEEEEE
Confidence 33445566 799998742 23579999997 443322221 22222222355556787 88864
No 252
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=36.83 E-value=1.1e+02 Score=29.28 Aligned_cols=58 Identities=17% Similarity=0.229 Sum_probs=33.5
Q ss_pred ceeEEecCCcEEEEcCcCCCCCCcccCCCCCCccEEEcCCCCCCCceEecCCCCCCccceeeEeeCCCCeEEEecCCCCC
Q 039705 321 GEMLLLPTGDVLIINGAKKGTAGWNFATDPNTTPVLYEPDDPINERFSELTPTSKPRMCHSTSVVLPDGKILVAGSNPHS 400 (539)
Q Consensus 321 ~~~vvlpdG~I~vvGG~~~g~~g~~~~~~~~~~~e~YdP~t~~g~~Wt~~a~~~~~R~yhs~a~llpdG~V~v~GG~~~~ 400 (539)
|..++ -||+||..|-...|.-+ .|. +... ....++ .-.+|+.++. ||+||.-|.+...
T Consensus 191 hs~al-~~G~v~~wG~n~~gqlg-----~p~-------~~~~---~v~~i~----~G~~h~~al~--~g~v~~wG~n~~g 248 (282)
T 3qhy_B 191 HSLAL-KDGKVIAWGDNRYKQTT-----VPT-------EALS---GVSAIA----SGEWYSLALK--NGKVIAWGSSRTA 248 (282)
T ss_dssp EEEEE-ETTEEEEEECCTTSTTC-----CCG-------GGGS---SCCEEE----ECSSCEEEEE--TTEEEEESTTCCC
T ss_pred EEEEE-ECCeEEEEECCCCCCCC-----CCc-------ccCC---CceEEE----cCCCEEEEEE--CCEEEEecCCCCc
Confidence 44444 69999999865544321 111 1111 333332 2346776654 9999999987543
No 253
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=36.73 E-value=50 Score=35.96 Aligned_cols=96 Identities=9% Similarity=0.109 Sum_probs=51.6
Q ss_pred ccEEEEecCCCCCcccccCCCcccccCCceEEEEeeCCCCceeee-ccCCC--------ceeceeEEecCCcEEEEcCcC
Q 039705 268 RAEVLICGGAKPEAGVLAGKGEFMNALQDCGRIEITNKSATWQRE-MMPSP--------RVMGEMLLLPTGDVLIINGAK 338 (539)
Q Consensus 268 ~g~Iyv~GG~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~-~M~~~--------R~~~~~vvlpdG~I~vvGG~~ 338 (539)
+++||++... ..+..+|..+....|+.. ..+.. -...+ +++-+++||+... +
T Consensus 66 ~g~vyv~~~~-----------------~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~v~v~~~-d 126 (668)
T 1kv9_A 66 DGVIYTSMSW-----------------SRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRG-VALWGDKVYVGTL-D 126 (668)
T ss_dssp TTEEEEEEGG-----------------GEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCC-CEEEBTEEEEECT-T
T ss_pred CCEEEEECCC-----------------CeEEEEECCCChhceEECCCCCccccccccccCCccc-eEEECCEEEEEcC-C
Confidence 8899987542 135678876545678874 32211 00112 3445888887432 2
Q ss_pred CCCCCcccCCCCCCccEEEcCCCCCCCceEecCCCCCCccceeeEeeCCCCeEEEecC
Q 039705 339 KGTAGWNFATDPNTTPVLYEPDDPINERFSELTPTSKPRMCHSTSVVLPDGKILVAGS 396 (539)
Q Consensus 339 ~g~~g~~~~~~~~~~~e~YdP~t~~g~~Wt~~a~~~~~R~yhs~a~llpdG~V~v~GG 396 (539)
+ .+.++|+++.+ ..|+.-..-.........+-++.+|+|||..+
T Consensus 127 -g------------~l~alD~~tG~-~~W~~~~~~~~~~~~~~~~P~v~~~~v~vg~~ 170 (668)
T 1kv9_A 127 -G------------RLIALDAKTGK-AIWSQQTTDPAKPYSITGAPRVVKGKVIIGNG 170 (668)
T ss_dssp -S------------EEEEEETTTCC-EEEEEECSCTTSSCBCCSCCEEETTEEEECCB
T ss_pred -C------------EEEEEECCCCC-EeeeeccCCCCCcceecCCCEEECCEEEEeCC
Confidence 1 57889998872 25886432111111122222234899988654
No 254
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=35.93 E-value=3.9e+02 Score=27.68 Aligned_cols=114 Identities=9% Similarity=0.010 Sum_probs=59.8
Q ss_pred CCCcEEEecCCCCCCCeEEEEeCCCCcc----ceeecc--cccc--cc-cccceeEEccCCcEEEEc--CccC---CeEE
Q 039705 110 ANGTIVISGGWSSRGRSVRYLSGCYHAC----YWKEHH--WELS--AK-RWFSTQHILPDGSFIVVG--GRRE---FSYE 175 (539)
Q Consensus 110 ~dG~l~v~GG~~~g~~~v~~ydP~~~t~----~W~~~~--~~m~--~~-R~y~s~~~L~dG~VyvvG--G~~~---~~~E 175 (539)
.+++-+++.|-. ...|.++|-. ++ +-...- .++. .+ .+-|+...++|| |||.- +.++ ..+-
T Consensus 93 ~~r~~l~v~~l~--s~~I~viD~~--t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~ 167 (462)
T 2ece_A 93 IERRFLIVPGLR--SSRIYIIDTK--PNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGIL 167 (462)
T ss_dssp CCSCEEEEEBTT--TCCEEEEECC--SCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEE
T ss_pred ccCCEEEEccCC--CCeEEEEECC--CCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEE
Confidence 567766666643 4678999975 43 221111 1121 12 234677788999 88742 2111 3455
Q ss_pred EE-ecCC--CcceeeccCccccCCCCCCCCcceEEEeeCCcEEEEE---------------------cCceeEeeCCCCe
Q 039705 176 YI-LKEG--KRIIYDLPILNETTNPSENNLYPFVFLSTDGNLFIFA---------------------NDRSILLNPETNE 231 (539)
Q Consensus 176 ~y-P~~~--~~~w~~~~~l~~~~~~~~~~~yp~~~~~~~G~Iyv~G---------------------g~~~e~yDp~tn~ 231 (539)
++ +++. -.+|..-. +... --| -.+..+++++++.. ++++.+||..+.+
T Consensus 168 vlD~~T~~v~~~~~~~~------~~~~-~~Y-d~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k 239 (462)
T 2ece_A 168 MLDHYSFEPLGKWEIDR------GDQY-LAY-DFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRK 239 (462)
T ss_dssp EECTTTCCEEEECCSBC------TTCC-CCC-CEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTE
T ss_pred EEECCCCeEEEEEccCC------CCcc-ccc-eEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCc
Confidence 55 5543 12332110 0000 012 13556788888876 4568899999876
Q ss_pred EEEEc
Q 039705 232 ILHVF 236 (539)
Q Consensus 232 W~~~~ 236 (539)
-.+.+
T Consensus 240 ~~~tI 244 (462)
T 2ece_A 240 RIHSL 244 (462)
T ss_dssp EEEEE
T ss_pred EeeEE
Confidence 55433
No 255
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=35.58 E-value=4.3e+02 Score=28.11 Aligned_cols=101 Identities=10% Similarity=0.063 Sum_probs=49.2
Q ss_pred EEEEEC-CCCC--EEeCccCC-----Ccccc---cceec--CCCc----EEEecCCCCCCCeEEEEeCCCCccceeeccc
Q 039705 82 AVEYDA-ESAA--IRPLKILT-----DTWSS---SGGLS--ANGT----IVISGGWSSRGRSVRYLSGCYHACYWKEHHW 144 (539)
Q Consensus 82 ~~~yDp-~t~~--w~~l~~~~-----~~~c~---~~~~l--~dG~----l~v~GG~~~g~~~v~~ydP~~~t~~W~~~~~ 144 (539)
...+|. +|++ |+.-.... ..+|. .+.++ .+++ ||+.... ..+..+|..++...|+.-..
T Consensus 75 v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~d----g~l~AlDa~TG~~~W~~~~~ 150 (599)
T 1w6s_A 75 TFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQLD----GNVAALNAETGETVWKVENS 150 (599)
T ss_dssp EEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECTT----SEEEEEETTTCCEEEEEECC
T ss_pred EEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcCC----CEEEEEECCCCCEEEeecCC
Confidence 445777 6654 65533221 12342 23445 5777 8775432 46888998755567975321
Q ss_pred ccccccccceeEEccCCcEEEEcCcc----CCeEEEE-ecCCCccee
Q 039705 145 ELSAKRWFSTQHILPDGSFIVVGGRR----EFSYEYI-LKEGKRIIY 186 (539)
Q Consensus 145 ~m~~~R~y~s~~~L~dG~VyvvGG~~----~~~~E~y-P~~~~~~w~ 186 (539)
.........+.-++.+|+||+..+.. ...+..| +++....|.
T Consensus 151 ~~~~~~~~~ssP~v~~g~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~ 197 (599)
T 1w6s_A 151 DIKVGSTLTIAPYVVKDKVIIGSSGAELGVRGYLTAYDVKTGEQVWR 197 (599)
T ss_dssp CGGGTCBCCSCCEEETTEEEECCBCGGGTCCCEEEEEETTTCCEEEE
T ss_pred CCCccceeecCCEEECCEEEEEecccccCCCCeEEEEECCCCcEEEE
Confidence 11111111122234488887643211 1234455 555434564
No 256
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=35.38 E-value=1.5e+02 Score=28.24 Aligned_cols=78 Identities=10% Similarity=0.144 Sum_probs=42.7
Q ss_pred ceEEEEeeCCCCceeeeccCCCceeceeEEecCCcEEEEcCcCCCCCCcccCCCCCCccEEEcCCCCCCCceEecCCCCC
Q 039705 296 DCGRIEITNKSATWQREMMPSPRVMGEMLLLPTGDVLIINGAKKGTAGWNFATDPNTTPVLYEPDDPINERFSELTPTSK 375 (539)
Q Consensus 296 s~~~~d~~~~~~~W~~~~M~~~R~~~~~vvlpdG~I~vvGG~~~g~~g~~~~~~~~~~~e~YdP~t~~g~~Wt~~a~~~~ 375 (539)
.+.+||+. +.+.....++. +. .+.+..+||+++|.. .. .+.+||+++. +++.+.....
T Consensus 72 ~i~~~d~~--~~~~~~~~~~~-~v-~~i~~~~dg~l~v~~--~~-------------gl~~~d~~~g---~~~~~~~~~~ 129 (326)
T 2ghs_A 72 ELHELHLA--SGRKTVHALPF-MG-SALAKISDSKQLIAS--DD-------------GLFLRDTATG---VLTLHAELES 129 (326)
T ss_dssp EEEEEETT--TTEEEEEECSS-CE-EEEEEEETTEEEEEE--TT-------------EEEEEETTTC---CEEEEECSST
T ss_pred EEEEEECC--CCcEEEEECCC-cc-eEEEEeCCCeEEEEE--CC-------------CEEEEECCCC---cEEEEeeCCC
Confidence 35677764 23222223322 22 233456899998854 11 3678999888 7776543221
Q ss_pred --CccceeeEeeCCCCeEEEec
Q 039705 376 --PRMCHSTSVVLPDGKILVAG 395 (539)
Q Consensus 376 --~R~yhs~a~llpdG~V~v~G 395 (539)
+........+.+||++|++.
T Consensus 130 ~~~~~~~~~i~~d~~G~l~v~~ 151 (326)
T 2ghs_A 130 DLPGNRSNDGRMHPSGALWIGT 151 (326)
T ss_dssp TCTTEEEEEEEECTTSCEEEEE
T ss_pred CCCCCCCCCEEECCCCCEEEEe
Confidence 11112234567899999864
No 257
>2vov_A MOPE, surface-associated protein; metal-binding protein, oxidized tryptophan, methanotroph bacterium, kunurenine, copper binding; HET: KYN; 1.35A {Methylococcus capsulatus} PDB: 2vox_A* 2vow_A
Probab=35.31 E-value=50 Score=29.95 Aligned_cols=32 Identities=38% Similarity=0.843 Sum_probs=23.9
Q ss_pred eEEEEEEcCCCCCcCCCcceEEEEEc-----------CC----------CCCccEEEEe
Q 039705 501 IFQVSVMAPPTAKIAPPSFYLLFVVY-----------RQ----------VPSPGTWVQI 538 (539)
Q Consensus 501 ~~~~~~~~P~~~~~~ppG~ymlf~~~-----------~g----------vPS~~~~v~i 538 (539)
..+-.+++|. -|||||+|-+ +| ||..+-||.|
T Consensus 279 aftksitlpk------tgyymlyvanvlevddwsvdadgkltttgevwevpakgcwvni 331 (336)
T 2vov_A 279 AFTKSITLPK------TGYYMLYVANVLEVDDWSVDADGKLTTTGEVWEVPAKGCWVNI 331 (336)
T ss_dssp EEEEEEECSS------SEEEEEEEEECCEESEEEECTTCCEEEESCCCCSSSSEEEEEE
T ss_pred eeeeeeeccC------cceEEEEEeeeEEeccceeccCCceeecceEEeccCCceEEEE
Confidence 4666677775 4999999853 22 8999999876
No 258
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=35.28 E-value=63 Score=35.35 Aligned_cols=96 Identities=11% Similarity=0.103 Sum_probs=51.8
Q ss_pred ccEEEEecCCCCCcccccCCCcccccCCceEEEEeeCCCCceeee-ccCCC--------ceeceeEEecCCcEEEEcCcC
Q 039705 268 RAEVLICGGAKPEAGVLAGKGEFMNALQDCGRIEITNKSATWQRE-MMPSP--------RVMGEMLLLPTGDVLIINGAK 338 (539)
Q Consensus 268 ~g~Iyv~GG~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~-~M~~~--------R~~~~~vvlpdG~I~vvGG~~ 338 (539)
+++||++... ..+..+|..+....|+.. ..... .... .+++-+|+||+... +
T Consensus 70 ~g~vyv~~~~-----------------~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~v~v~~~-d 130 (689)
T 1yiq_A 70 DGVMYTTGPF-----------------SVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNR-GVAVWKGKVYVGVL-D 130 (689)
T ss_dssp TTEEEEECGG-----------------GCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCC-CCEEETTEEEEECT-T
T ss_pred CCEEEEEcCC-----------------CeEEEEECCCCceeEEEcCCCCccccccccccCCCC-ccEEECCEEEEEcc-C
Confidence 8899987542 135678876545679874 32210 0111 23455888887432 2
Q ss_pred CCCCCcccCCCCCCccEEEcCCCCCCCceEecCCCCCCcc-ceeeEeeCCCCeEEEecC
Q 039705 339 KGTAGWNFATDPNTTPVLYEPDDPINERFSELTPTSKPRM-CHSTSVVLPDGKILVAGS 396 (539)
Q Consensus 339 ~g~~g~~~~~~~~~~~e~YdP~t~~g~~Wt~~a~~~~~R~-yhs~a~llpdG~V~v~GG 396 (539)
+ .+..+|.+|.+ ..|+.-......+. ....+-++.+|+||+..+
T Consensus 131 -g------------~l~AlDa~TG~-~~W~~~~~~~~~~~~~~~~sP~v~~g~v~vg~~ 175 (689)
T 1yiq_A 131 -G------------RLEAIDAKTGQ-RAWSVDTRADHKRSYTITGAPRVVNGKVVIGNG 175 (689)
T ss_dssp -S------------EEEEEETTTCC-EEEEEECCSCTTSCCBCCSCCEEETTEEEECCB
T ss_pred -C------------EEEEEECCCCC-EeeeecCcCCCCCCccccCCcEEECCEEEEEeC
Confidence 1 56889998872 25876432111111 111122234999988654
No 259
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=33.26 E-value=4.7e+02 Score=27.87 Aligned_cols=60 Identities=15% Similarity=0.110 Sum_probs=36.2
Q ss_pred cceecCCCcEEEecCCCCCC--CeEEEEeCCCCccceeecccccccccccceeEEccCCcEEEEcCc
Q 039705 105 SGGLSANGTIVISGGWSSRG--RSVRYLSGCYHACYWKEHHWELSAKRWFSTQHILPDGSFIVVGGR 169 (539)
Q Consensus 105 ~~~~l~dG~l~v~GG~~~g~--~~v~~ydP~~~t~~W~~~~~~m~~~R~y~s~~~L~dG~VyvvGG~ 169 (539)
+.+..+||+.++++-...|. ..++++|.. +.+..... +...+ ..+.+-.+||+-++.+..
T Consensus 129 ~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~--tg~~~~~~--~~~~~-~~~~~wspDg~~l~~~~~ 190 (710)
T 2xdw_A 129 GYAFSEDGEYFAYGLSASGSDWVTIKFMKVD--GAKELPDV--LERVK-FSCMAWTHDGKGMFYNAY 190 (710)
T ss_dssp EEEECTTSSEEEEEEEETTCSCEEEEEEETT--TTEEEEEE--EEEEC-SCCEEECTTSSEEEEEEC
T ss_pred EEEECCCCCEEEEEEcCCCCceEEEEEEECC--CCCCCccc--ccCcc-cceEEEEeCCCEEEEEEE
Confidence 34567899988876443333 388999998 77665431 22222 233455568876666543
No 260
>3mvd_K Regulator of chromosome condensation; protein-DNA complex, nucleosome core particle (NCP), NCP-CHR factor complex; HET: DNA; 2.90A {Drosophila melanogaster}
Probab=32.43 E-value=68 Score=32.39 Aligned_cols=73 Identities=16% Similarity=0.166 Sum_probs=39.7
Q ss_pred eceeEEecCCcEEEEcCcCCCCCCcccCCCCCCccEEEcCCCCCCCceEecCCCCCCccceeeEeeCCCCeEEEecCCCC
Q 039705 320 MGEMLLLPTGDVLIINGAKKGTAGWNFATDPNTTPVLYEPDDPINERFSELTPTSKPRMCHSTSVVLPDGKILVAGSNPH 399 (539)
Q Consensus 320 ~~~~vvlpdG~I~vvGG~~~g~~g~~~~~~~~~~~e~YdP~t~~g~~Wt~~a~~~~~R~yhs~a~llpdG~V~v~GG~~~ 399 (539)
.|.+++.-||+||..|-...|.-|.+...+....+..-..-.+ +...++ .-.+|+.+ |..||+||.-|.+..
T Consensus 304 ~ht~alt~~G~v~~wG~n~~GqLG~g~~~~~~~~p~~v~~l~~---~v~~ia----~G~~hs~a-lt~~G~v~~wG~n~~ 375 (423)
T 3mvd_K 304 HHTVILTTDLKCSVVGRPEYGRLGLGDVKDVVEKPTIVKKLTE---KIVSVG----CGEVCSYA-VTIDGKLYSWGSGVN 375 (423)
T ss_dssp SEEEEEETTCCEEEEECCGGGTTCSSSCCSCEEEEEECTTCCS---CEEEEE----EETTEEEE-EETTSCEEEEECCTT
T ss_pred CeEEEEeCCCcEEEEECCCCCCCCCCCccccccCceEeccCCC---CEEEEE----cCCCeEEE-EcCCCCEEEECCCCC
Confidence 3555667799999999655454432211111111111111111 333332 23567765 468999999998866
Q ss_pred C
Q 039705 400 S 400 (539)
Q Consensus 400 ~ 400 (539)
.
T Consensus 376 G 376 (423)
T 3mvd_K 376 N 376 (423)
T ss_dssp S
T ss_pred C
Confidence 5
No 261
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=31.50 E-value=3.7e+02 Score=26.11 Aligned_cols=116 Identities=12% Similarity=0.132 Sum_probs=55.9
Q ss_pred eCCcEEEEEcC--ceeEeeCCCCeEEE--EcccCCCCCCccCCCccEEecccccCCCCCCCcccEEEEecCCCCCccccc
Q 039705 210 TDGNLFIFAND--RSILLNPETNEILH--VFPILRGGSRNYPASATSALLPIKLQDPNSNAIRAEVLICGGAKPEAGVLA 285 (539)
Q Consensus 210 ~~G~Iyv~Gg~--~~e~yDp~tn~W~~--~~p~mp~~~r~yp~~g~av~lpl~~~~~~~~~~~g~Iyv~GG~~~~~~~~~ 285 (539)
+++++.+.|+. .+.+||.++.+-.. .+..+.+ ...+ --....-|... ..+..++++++.||.+.
T Consensus 99 ~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~g-H~~~--v~~v~~~p~~~---~~~~~d~~~las~s~D~------ 166 (393)
T 4gq1_A 99 VYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSG-HHNF--VNDIDIADVYS---ADNRLAEQVIASVGDDC------ 166 (393)
T ss_dssp EEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTS-CSSC--EEEEEEEEEEC---TTCSEEEEEEEEEETTS------
T ss_pred CCCCEEEEEeCCCcEEEEECCCCccceeeeecccCC-CCCc--eEEEEEccccc---cccCCCCCEEEEEECCC------
Confidence 35556666653 47888988775431 2223333 1111 01112212110 01113789999999762
Q ss_pred CCCcccccCCceEEEEeeCCCCceeeeccCCCceeceeEEecCCc-EEEEcCcCCCCCCcccCCCCCCccEEEcCCCC
Q 039705 286 GKGEFMNALQDCGRIEITNKSATWQREMMPSPRVMGEMLLLPTGD-VLIINGAKKGTAGWNFATDPNTTPVLYEPDDP 362 (539)
Q Consensus 286 ~~~~~~~a~~s~~~~d~~~~~~~W~~~~M~~~R~~~~~vvlpdG~-I~vvGG~~~g~~g~~~~~~~~~~~e~YdP~t~ 362 (539)
++-.+|+......-....... ... +..-.|++. +++.|+.+ + ++.+||..+.
T Consensus 167 ----------tv~~Wd~~~~~~~~~~~~~~~-~v~-~v~~~p~~~~~l~~~~~d-~------------~v~~wd~~t~ 219 (393)
T 4gq1_A 167 ----------TLIIWRLTDEGPILAGYPLSS-PGI-SVQFRPSNPNQLIVGERN-G------------NIRIFDWTLN 219 (393)
T ss_dssp ----------EEEEEEEETTEEEEEEEECSS-CEE-EEEEETTEEEEEEEEETT-S------------EEEEEETTCC
T ss_pred ----------eEEEEECCCCceeeeecCCCC-CcE-EEEECCCCCceEEecCCC-C------------EEEEEECCCC
Confidence 455677653111111112211 122 223457774 77777655 2 5678887765
No 262
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=31.45 E-value=2.4e+02 Score=32.03 Aligned_cols=84 Identities=7% Similarity=-0.123 Sum_probs=50.1
Q ss_pred eEEEEECCCCCEEeCccCCCcccccceecCCCcEEEecCCCC-------CCCeEEEEeCCCCccceeecccccccccccc
Q 039705 81 LAVEYDAESAAIRPLKILTDTWSSSGGLSANGTIVISGGWSS-------RGRSVRYLSGCYHACYWKEHHWELSAKRWFS 153 (539)
Q Consensus 81 ~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~l~v~GG~~~-------g~~~v~~ydP~~~t~~W~~~~~~m~~~R~y~ 153 (539)
...+||+.+++.+.+...+.......+..+||+.+++++... ....+.++|.. +.+...+.. ......
T Consensus 401 ~v~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~--~g~~~~l~~---~~~~~~ 475 (1045)
T 1k32_A 401 EIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDME--GRKIFAATT---ENSHDY 475 (1045)
T ss_dssp EEEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETT--TTEEEECSC---SSSBEE
T ss_pred eEEEEECCCCceEEeccCCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECC--CCcEEEeeC---CCcccC
Confidence 456899999888776533333333445678999888775421 23578999987 655444332 111112
Q ss_pred eeEEccCCcEEEEcCc
Q 039705 154 TQHILPDGSFIVVGGR 169 (539)
Q Consensus 154 s~~~L~dG~VyvvGG~ 169 (539)
+.+.-+||+.++++..
T Consensus 476 ~~~~spdG~~l~~~s~ 491 (1045)
T 1k32_A 476 APAFDADSKNLYYLSY 491 (1045)
T ss_dssp EEEECTTSCEEEEEES
T ss_pred CceEcCCCCEEEEEec
Confidence 3445678886655543
No 263
>2jkb_A Sialidase B; intramolecular trans-sialidase, lyase, glycosidase, neuraminidase; HET: SKD; 1.54A {Streptococcus pneumoniae} PDB: 2vw2_A* 2vw1_A* 2vw0_A*
Probab=30.88 E-value=5.5e+02 Score=27.91 Aligned_cols=39 Identities=15% Similarity=0.015 Sum_probs=25.4
Q ss_pred EcCCCCCCCceEecCCCCCC--ccceeeEeeCCCCeEEEec
Q 039705 357 YEPDDPINERFSELTPTSKP--RMCHSTSVVLPDGKILVAG 395 (539)
Q Consensus 357 YdP~t~~g~~Wt~~a~~~~~--R~yhs~a~llpdG~V~v~G 395 (539)
++-.++.|++|+.......+ ..+.+..+.++||+|+++=
T Consensus 617 ~~~S~D~G~TW~~~~~i~~~~~~~~Ys~l~~~~DG~i~ily 657 (686)
T 2jkb_A 617 LVNKEDDSIDWKYHYDIDLPSYGYAYSAITELPNHHIGVLF 657 (686)
T ss_dssp EECTTTCCEEEEEEEESSCTTSBCCSEEEEECTTSCEEEEE
T ss_pred EEeccCCCCcccCCeeecCCCCCccccEEEEeCcCEEEEEE
Confidence 45566778899976544332 1334556667999997764
No 264
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=29.91 E-value=86 Score=29.54 Aligned_cols=100 Identities=13% Similarity=0.190 Sum_probs=54.0
Q ss_pred cCCCcEEEecCCCCCCCeEEEEeCCC-Cccceeecccccccccc--cceeEEccCCcEEEEcCccCCeEEEEe-cCCCcc
Q 039705 109 SANGTIVISGGWSSRGRSVRYLSGCY-HACYWKEHHWELSAKRW--FSTQHILPDGSFIVVGGRREFSYEYIL-KEGKRI 184 (539)
Q Consensus 109 l~dG~l~v~GG~~~g~~~v~~ydP~~-~t~~W~~~~~~m~~~R~--y~s~~~L~dG~VyvvGG~~~~~~E~yP-~~~~~~ 184 (539)
-+||.||++ . + ..+...+|.. +...|...+..+-..=| +-+...=+||.+|++ .++.-+.+-| .+....
T Consensus 49 ~P~G~LYaV--~-~--G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~F~a~~fD~~G~LYav--~dG~iyr~~pP~~~~~~ 121 (236)
T 1tl2_A 49 SPGGELYGV--L-N--DKIYKGTPPTHDNDNWMGRAKKIGNGGWNQFQFLFFDPNGYLYAV--SKDKLYKASPPQSDTDN 121 (236)
T ss_dssp CTTSCEEEE--E-T--TEEEEESCCCSTTCCHHHHCEEEECSCGGGCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCC
T ss_pred CCCccEEEE--e-C--CeEEEECCCCCCcccccccccEecccccccceEEEECCCCCEEEe--CCCEEEEeCCCcCCCCc
Confidence 469999999 2 2 3577778742 34567665332211112 233444458999999 4432222223 333567
Q ss_pred eeeccCccccCCCCCCCCcceEEEeeCCcEEEEE
Q 039705 185 IYDLPILNETTNPSENNLYPFVFLSTDGNLFIFA 218 (539)
Q Consensus 185 w~~~~~l~~~~~~~~~~~yp~~~~~~~G~Iyv~G 218 (539)
|.-....... .....+.+.+..++|.||++.
T Consensus 122 Wl~~a~~vg~---~gw~~~~~lff~p~G~Lyav~ 152 (236)
T 1tl2_A 122 WIARATEVGS---GGWSGFKFLFFHPNGYLYAVH 152 (236)
T ss_dssp HHHHSEEEEC---SSGGGEEEEEECTTSCEEEEE
T ss_pred eeccccEecc---CCCCceEEEEECCCceEEEEe
Confidence 7422111111 112345666777899999988
No 265
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=28.99 E-value=2.3e+02 Score=27.01 Aligned_cols=74 Identities=11% Similarity=0.021 Sum_probs=42.1
Q ss_pred EEEEECCCCCEEeCccCCCcccccceecCCCcEEEecCCCCCCCeEEEEeCCCCccceeecccccc----cccccceeEE
Q 039705 82 AVEYDAESAAIRPLKILTDTWSSSGGLSANGTIVISGGWSSRGRSVRYLSGCYHACYWKEHHWELS----AKRWFSTQHI 157 (539)
Q Consensus 82 ~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydP~~~t~~W~~~~~~m~----~~R~y~s~~~ 157 (539)
..+||+.+++.+.+....... +-+...||++++... ..+.+||+. +.++..+.. .. ..|. ...+.
T Consensus 73 i~~~d~~~~~~~~~~~~~~v~--~i~~~~dg~l~v~~~-----~gl~~~d~~--~g~~~~~~~-~~~~~~~~~~-~~i~~ 141 (326)
T 2ghs_A 73 LHELHLASGRKTVHALPFMGS--ALAKISDSKQLIASD-----DGLFLRDTA--TGVLTLHAE-LESDLPGNRS-NDGRM 141 (326)
T ss_dssp EEEEETTTTEEEEEECSSCEE--EEEEEETTEEEEEET-----TEEEEEETT--TCCEEEEEC-SSTTCTTEEE-EEEEE
T ss_pred EEEEECCCCcEEEEECCCcce--EEEEeCCCeEEEEEC-----CCEEEEECC--CCcEEEEee-CCCCCCCCCC-CCEEE
Confidence 557888887766543222222 223457899888652 348899997 666655432 21 1121 23444
Q ss_pred ccCCcEEEE
Q 039705 158 LPDGSFIVV 166 (539)
Q Consensus 158 L~dG~Vyvv 166 (539)
-+||++|+.
T Consensus 142 d~~G~l~v~ 150 (326)
T 2ghs_A 142 HPSGALWIG 150 (326)
T ss_dssp CTTSCEEEE
T ss_pred CCCCCEEEE
Confidence 557887763
No 266
>2vsd_A CHIR AB1; immune system receptor, FC receptor; HET: NAG NDG MAN; 1.82A {Gallus gallus}
Probab=27.21 E-value=1.9e+02 Score=22.48 Aligned_cols=39 Identities=13% Similarity=0.149 Sum_probs=28.6
Q ss_pred CCCceeecCCCc-eeecCCEEEEEEEecccccccCcEEEEEEcCCcc
Q 039705 431 YRPSIVSKFKGK-MLKYGQNFVIQFKLDELEVSLNDLKVTMYAPPFT 476 (539)
Q Consensus 431 ~RP~i~~~~~p~-~~~~g~~~~v~~~~~~~~~~~~~~~v~l~~~~~~ 476 (539)
++|+|... |. .+.-|++++++=.... ....+.+.+.+..
T Consensus 4 ~kP~i~~~--p~~~v~~G~~VtL~C~~~~-----~~~~~~w~k~g~~ 43 (105)
T 2vsd_A 4 PQPSLSLH--PSQGVSLGDTVTLRCHLPR-----MAAWVQLWLNGTL 43 (105)
T ss_dssp CCCEEEEE--SCSSCCTTCEEEEEEECCS-----SCEEEEEEETTEE
T ss_pred CCCEEEeC--CCCCcCcCCCEEEEEEcCC-----CCcEEEEEECCcc
Confidence 58999987 65 5889999999876432 2467778887644
No 267
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=27.07 E-value=4.8e+02 Score=26.25 Aligned_cols=60 Identities=12% Similarity=0.041 Sum_probs=33.6
Q ss_pred ccccceecC-CCcEEEecCCCCCCCeEEEEeCCCCccce-eecccccccccccceeEEccCCc-EEEEc
Q 039705 102 WSSSGGLSA-NGTIVISGGWSSRGRSVRYLSGCYHACYW-KEHHWELSAKRWFSTQHILPDGS-FIVVG 167 (539)
Q Consensus 102 ~c~~~~~l~-dG~l~v~GG~~~g~~~v~~ydP~~~t~~W-~~~~~~m~~~R~y~s~~~L~dG~-VyvvG 167 (539)
.+.+.++.+ +|.||+.-- ....+++||+. +.+. +.+.. .....|-...+.-++|+ +|+.-
T Consensus 229 ~P~giavd~~~G~lyv~d~---~~~~V~~~d~~--~g~~~~~~~~-~~~~~~~~~ia~dpdG~~LYvad 291 (433)
T 4hw6_A 229 GAKTCAVHPQNGKIYYTRY---HHAMISSYDPA--TGTLTEEEVM-MDTKGSNFHIVWHPTGDWAYIIY 291 (433)
T ss_dssp SBCCCEECTTTCCEEECBT---TCSEEEEECTT--TCCEEEEEEE-CSCCSSCEEEEECTTSSEEEEEE
T ss_pred CCCEEEEeCCCCeEEEEEC---CCCEEEEEECC--CCeEEEEEec-cCCCCCcccEEEeCCCCEEEEEe
Confidence 344555666 899998743 23579999997 4443 22211 11122322455556776 77764
No 268
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=26.46 E-value=77 Score=30.74 Aligned_cols=58 Identities=9% Similarity=0.095 Sum_probs=37.0
Q ss_pred eEEecCCcEEEEcCcCCCCCCcccCCCCCCccEEEcCCCCCCCceEecCCCCCCccce-eeEeeCCCCeEEEecCCC
Q 039705 323 MLLLPTGDVLIINGAKKGTAGWNFATDPNTTPVLYEPDDPINERFSELTPTSKPRMCH-STSVVLPDGKILVAGSNP 398 (539)
Q Consensus 323 ~vvlpdG~I~vvGG~~~g~~g~~~~~~~~~~~e~YdP~t~~g~~Wt~~a~~~~~R~yh-s~a~llpdG~V~v~GG~~ 398 (539)
+++=++|+||+..-.. ..+.+|||++. ++..+...+ +..+ ....+-+||++||+....
T Consensus 253 ia~d~~G~l~va~~~~-------------~~V~~~d~~~G---~~~~~~~~~--~~~~p~~va~~~~g~l~v~~~~~ 311 (343)
T 2qe8_A 253 ISIDKDHNIYVGDLAH-------------SAIGVITSADR---AYKLLVTDE--KLSWTDSFNFGSDGYLYFDCNQL 311 (343)
T ss_dssp EEECTTCCEEEEEGGG-------------TEEEEEETTTT---EEEEEEECG--GGSCEEEEEECTTSCEEEEECCG
T ss_pred EEECCCCCEEEEccCC-------------CeEEEEECCCC---CEEEEEECC--ceecCCeeEECCCCcEEEEeCcc
Confidence 3445789999975332 16899999666 676655433 2222 223445899999997743
No 269
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=25.36 E-value=1.5e+02 Score=28.97 Aligned_cols=73 Identities=11% Similarity=-0.092 Sum_probs=41.7
Q ss_pred eEEEEECCCCCEEeCccCCCcccccceecCCCcEEEecCCCCCCCeEEEEeCCCCccceeeccccc-ccccccceeEEcc
Q 039705 81 LAVEYDAESAAIRPLKILTDTWSSSGGLSANGTIVISGGWSSRGRSVRYLSGCYHACYWKEHHWEL-SAKRWFSTQHILP 159 (539)
Q Consensus 81 ~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydP~~~t~~W~~~~~~m-~~~R~y~s~~~L~ 159 (539)
...+||.++.+-...-.... +.+-++.+||+.+.+.+. .++.+||.. +.+-+.+.. + ..++.-...+.-+
T Consensus 287 ~v~viD~~t~~~v~~i~~~~--p~~ia~spdg~~l~v~n~----~~v~v~D~~--t~~l~~~~~-i~~~G~~P~~~~~~p 357 (361)
T 2oiz_A 287 EIWVMDTKTKQRVARIPGRD--ALSMTIDQQRNLMLTLDG----GNVNVYDIS--QPEPKLLRT-IEGAAEASLQVQFHP 357 (361)
T ss_dssp EEEEEETTTTEEEEEEECTT--CCEEEEETTTTEEEEECS----SCEEEEECS--SSSCEEEEE-ETTSCSSEEEEEECC
T ss_pred eEEEEECCCCcEEEEEecCC--eeEEEECCCCCEEEEeCC----CeEEEEECC--CCcceeeEE-eccCCCCcEEEEecC
Confidence 56779999887644322222 555567789886666552 679999987 541133332 3 2333222344555
Q ss_pred CCc
Q 039705 160 DGS 162 (539)
Q Consensus 160 dG~ 162 (539)
||+
T Consensus 358 ~G~ 360 (361)
T 2oiz_A 358 VGG 360 (361)
T ss_dssp CSC
T ss_pred CCC
Confidence 653
No 270
>2xzi_A KDNAse, extracellular sialidase/neuraminidase, putative; hydrolase; HET: KDM; 1.45A {Aspergillus fumigatus} PDB: 2xcy_A* 2xzj_A* 2xzk_A*
Probab=23.61 E-value=2e+02 Score=28.71 Aligned_cols=121 Identities=16% Similarity=0.031 Sum_probs=60.3
Q ss_pred CCceEEccCCCcccceEEEecCCCCEEEEEccccCCCCCccCCCcccccCCCccccccccceeEEEEECCCCCEEeCc--
Q 039705 19 KGKWELASENSGISAMHIILFPNTNKAIMLDAVSLGPSNVRLPVGIYRLNPGAWQKYVDYRALAVEYDAESAAIRPLK-- 96 (539)
Q Consensus 19 ~g~W~~~~~~~~~~~~~~~ll~~~gkv~~~g~~~~~~~~~~~~~g~~~~~~~~~~g~~~~~~~~~~yDp~t~~w~~l~-- 96 (539)
.-+|+...........+++-+ .+|+++++-+...+ +. + ..++.-| .+|++..
T Consensus 215 G~tW~~~~~~~~~~e~~vve~-~dG~L~~~~r~~~g--------~~-r-------------~v~~S~D---~tWt~~~~~ 268 (386)
T 2xzi_A 215 NRTWSVQRLSGAGAEGTIVQT-PDGKLYRNDRPSQK--------GY-R-------------MVARGTL---EGFGAFAPD 268 (386)
T ss_dssp SCEEEEEECTTCCSSEEEEEC-TTSCEEEEECCSSS--------EE-E-------------EEEEEET---TEECCCEEE
T ss_pred CCcccccCcCCCCCcCEEEEe-CCCcEEEEEeCCCC--------cc-E-------------EEEEEeC---CccCccccc
Confidence 357997543222244455656 78999988764321 01 1 1233445 6787654
Q ss_pred -cCCCcccccceecC---CCcEEEecCCC--CCCCeEEEEeCCCC-ccceeeccccccc-c-------cccceeEEccCC
Q 039705 97 -ILTDTWSSSGGLSA---NGTIVISGGWS--SRGRSVRYLSGCYH-ACYWKEHHWELSA-K-------RWFSTQHILPDG 161 (539)
Q Consensus 97 -~~~~~~c~~~~~l~---dG~l~v~GG~~--~g~~~v~~ydP~~~-t~~W~~~~~~m~~-~-------R~y~s~~~L~dG 161 (539)
.+++..|.++.... +..++++..-. .......++=-.+. ..+|..... +.. + -.|++.+.+.||
T Consensus 269 ~~l~~~~~~~~~i~~~~~~~~~ll~~~p~~~~~R~~l~l~~S~D~~G~tW~~~~~-~~~g~~~~~~~~~~ys~l~~~~dg 347 (386)
T 2xzi_A 269 AGLPDPACQGSVLRYNSDAPARTIFLNSASGTSRRAMRVRISYDADAKKFNYGRK-LEDAKVSGAGHEGGYSSMTKTGDY 347 (386)
T ss_dssp EEEEECSCCCEEEEEESSSSCEEEEEEECSSSCSCCEEEEEECSTTCCCCCCCEE-GGGGCCSSSCEEEEEEEEEECTTS
T ss_pred CCCCCCCCccEEEEecCCCCCEEEEECCCCCCCCcceEEEEEcCCCCCccCCceE-EecCCccccCCceEeceeEECCCC
Confidence 23344566555433 34455554211 11122222211112 467876432 222 2 346666678888
Q ss_pred cEEEE
Q 039705 162 SFIVV 166 (539)
Q Consensus 162 ~Vyvv 166 (539)
+|+++
T Consensus 348 ~l~~l 352 (386)
T 2xzi_A 348 KIGAL 352 (386)
T ss_dssp CEEEE
T ss_pred EEEEE
Confidence 88874
No 271
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=22.81 E-value=27 Score=34.74 Aligned_cols=56 Identities=7% Similarity=0.019 Sum_probs=26.1
Q ss_pred ceEEEEeeCCCCceeeeccCCCceeceeEEecCCcEEEEcCcCCCCCCcccCCCCCCccEEEcCCCCCCCceEe
Q 039705 296 DCGRIEITNKSATWQREMMPSPRVMGEMLLLPTGDVLIINGAKKGTAGWNFATDPNTTPVLYEPDDPINERFSE 369 (539)
Q Consensus 296 s~~~~d~~~~~~~W~~~~M~~~R~~~~~vvlpdG~I~vvGG~~~g~~g~~~~~~~~~~~e~YdP~t~~g~~Wt~ 369 (539)
.+.++|..+....|+... .. .... .++.+|++|+++..+ | .+.+||+++... .|+.
T Consensus 20 ~v~a~d~~tG~~~W~~~~-~~--~~s~-p~~~~g~~~v~~s~d-g------------~l~a~d~~tG~~-~w~~ 75 (369)
T 2hz6_A 20 SLHAVSKRTGSIKWTLKE-DP--VLQV-PTHVEEPAFLPDPND-G------------SLYTLGSKNNEG-LTKL 75 (369)
T ss_dssp EEEEEETTTCCEEEEEEC-CC--SCCC-C-----CCEEECTTT-C------------CEEEC-----CC-SEEC
T ss_pred EEEEEECCCCCEEEEecC-CC--ceec-ceEcCCCEEEEeCCC-C------------EEEEEECCCCce-eeee
Confidence 356788765456788653 11 1122 335688898887543 1 468899876532 4653
No 272
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=22.61 E-value=7.5e+02 Score=26.66 Aligned_cols=165 Identities=10% Similarity=-0.034 Sum_probs=0.0
Q ss_pred cceEEEecCCCCEEEEEccccCCCCCccCCCcccccCCCccccccccceeEEEEECCCCCEEeCccCCCcccccceecC-
Q 039705 32 SAMHIILFPNTNKAIMLDAVSLGPSNVRLPVGIYRLNPGAWQKYVDYRALAVEYDAESAAIRPLKILTDTWSSSGGLSA- 110 (539)
Q Consensus 32 ~~~~~~ll~~~gkv~~~g~~~~~~~~~~~~~g~~~~~~~~~~g~~~~~~~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~- 110 (539)
.+..+++-..+++||+.+... ....++|+.....+.+.......-.+.++.+
T Consensus 454 ~P~glavD~~~g~LY~tD~~~---------------------------~~I~v~d~dg~~~~~l~~~~~~~P~giavDp~ 506 (699)
T 1n7d_A 454 APDGLAVDWIHSNIYWTDSVL---------------------------GTVSVADTKGVKRKTLFREQGSKPRAIVVDPV 506 (699)
T ss_dssp -CCCEECCCSSSBCEECCTTT---------------------------SCEEEEBSSSCCEEEECCCSSCCCCCEECCSS
T ss_pred CcceEEEEeeCCcEEEEeccC---------------------------CeEEEEecCCCceEEEEeCCCCCcceEEEccC
Q ss_pred CCcEEEecCCCCCCCeEEEEeCCCCccceeecccccccccccceeEEccCCcEEEEcCccCCeEEEE-ecCCCcceeecc
Q 039705 111 NGTIVISGGWSSRGRSVRYLSGCYHACYWKEHHWELSAKRWFSTQHILPDGSFIVVGGRREFSYEYI-LKEGKRIIYDLP 189 (539)
Q Consensus 111 dG~l~v~GG~~~g~~~v~~ydP~~~t~~W~~~~~~m~~~R~y~s~~~L~dG~VyvvGG~~~~~~E~y-P~~~~~~w~~~~ 189 (539)
+|+||++--... ..|+++++. ...-..+.. -....-..-+.-..+++||++= .....++++ +... .-..+-
T Consensus 507 ~g~ly~td~~~~--~~I~~~~~d--G~~~~~l~~-~~l~~PnGlavd~~~~~LY~aD-~~~~~I~~~d~dG~--~~~~~~ 578 (699)
T 1n7d_A 507 HGFMYWTDWGTP--AKIKKGGLN--GVDIYSLVT-ENIQWPNGITLDLLSGRLYWVD-SKLHSISSIDVNGG--NRKTIL 578 (699)
T ss_dssp SSCCEECCCSSS--CCEEBCCSS--SCCCCEESC-SSCSSCCCEEECTTTCCEEEEE-TTTTEEEEECSSSS--CCEEEC
T ss_pred CCcEEEcccCCC--CeEEEEeCC--CCCeeEEEe-CCCCCccEEEEeccCCEEEEEe-cCCCeEEEEccCCC--ceEEEE
Q ss_pred CccccCCCCCCCCcceEEEeeCCcEEEE--EcCceeEeeCCCCeEEEEcc
Q 039705 190 ILNETTNPSENNLYPFVFLSTDGNLFIF--ANDRSILLNPETNEILHVFP 237 (539)
Q Consensus 190 ~l~~~~~~~~~~~yp~~~~~~~G~Iyv~--Gg~~~e~yDp~tn~W~~~~p 237 (539)
....... +|+.+.+-.++||+. +++.+.++|+.+++-.+.+.
T Consensus 579 ~~~~~~~------~P~glavd~~~lywtd~~~~~V~~~d~~~G~~~~~i~ 622 (699)
T 1n7d_A 579 EDEKRLA------HPFSLAVFEDKVFWTDIINEAIFSANRLTGSDVNLLA 622 (699)
T ss_dssp CCSSSCS------SCCCCEEETTEEEEECSTTTCEEEEETTTEEEEECCC
T ss_pred ecCCcCC------CceEeEEECCEEEEEeCCCCeEEEEEccCCCceEEee
No 273
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=22.35 E-value=4.6e+02 Score=24.08 Aligned_cols=126 Identities=14% Similarity=0.102 Sum_probs=62.0
Q ss_pred EEEEECC-CCCEEeCccCCCcccccceecCCCcEEEecCCCCCCCeEEEEeCCCCccceeecccccccccccceeEEccC
Q 039705 82 AVEYDAE-SAAIRPLKILTDTWSSSGGLSANGTIVISGGWSSRGRSVRYLSGCYHACYWKEHHWELSAKRWFSTQHILPD 160 (539)
Q Consensus 82 ~~~yDp~-t~~w~~l~~~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydP~~~t~~W~~~~~~m~~~R~y~s~~~L~d 160 (539)
...||+. ...|+.-.. ......-....+|+|++... ...+.+||+. +...|... +.... ..+.+.-.+
T Consensus 119 l~~~d~~g~~~~~~~~~--~~~~~~~~~~~~g~l~vgt~----~~~l~~~d~~-g~~~~~~~---~~~~~-~~~~~~d~~ 187 (330)
T 3hxj_A 119 LYAINTDGTEKWRFKTK--KAIYATPIVSEDGTIYVGSN----DNYLYAINPD-GTEKWRFK---TNDAI-TSAASIGKD 187 (330)
T ss_dssp EEEECTTSCEEEEEECS--SCCCSCCEECTTSCEEEECT----TSEEEEECTT-SCEEEEEE---CSSCC-CSCCEECTT
T ss_pred EEEEcCCCCEEEEEcCC--CceeeeeEEcCCCEEEEEcC----CCEEEEECCC-CCEeEEEe---cCCCc-eeeeEEcCC
Confidence 4567887 223443221 11222223344788777432 2568899987 34557543 22222 223334358
Q ss_pred CcEEEEcCccCCeEEEEecCCCcceeeccCccccCCCCCCCCcceEEEeeCCcEEEEEc-CceeEeeCCCCe
Q 039705 161 GSFIVVGGRREFSYEYILKEGKRIIYDLPILNETTNPSENNLYPFVFLSTDGNLFIFAN-DRSILLNPETNE 231 (539)
Q Consensus 161 G~VyvvGG~~~~~~E~yP~~~~~~w~~~~~l~~~~~~~~~~~yp~~~~~~~G~Iyv~Gg-~~~e~yDp~tn~ 231 (539)
|.||+.. ..+.+|..+....|........ ........+|+||+... ....+||+....
T Consensus 188 g~l~v~t----~~l~~~d~~g~~~~~~~~~~~~---------~~~~~~~~~g~l~v~t~~~gl~~~~~~g~~ 246 (330)
T 3hxj_A 188 GTIYFGS----DKVYAINPDGTEKWNFYAGYWT---------VTRPAISEDGTIYVTSLDGHLYAINPDGTE 246 (330)
T ss_dssp CCEEEES----SSEEEECTTSCEEEEECCSSCC---------CSCCEECTTSCEEEEETTTEEEEECTTSCE
T ss_pred CEEEEEe----CEEEEECCCCcEEEEEccCCcc---------eeceEECCCCeEEEEcCCCeEEEECCCCCE
Confidence 8888865 2233443222224532210000 00123445788988764 467788876554
No 274
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=21.70 E-value=2.3e+02 Score=30.25 Aligned_cols=76 Identities=11% Similarity=0.075 Sum_probs=42.2
Q ss_pred eEEEEECCCCC--EEeCccCCCcccccceecCCCcEEEecCCCCCCCeEEEEeCCCCccceeecccccccccccceeEE-
Q 039705 81 LAVEYDAESAA--IRPLKILTDTWSSSGGLSANGTIVISGGWSSRGRSVRYLSGCYHACYWKEHHWELSAKRWFSTQHI- 157 (539)
Q Consensus 81 ~~~~yDp~t~~--w~~l~~~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydP~~~t~~W~~~~~~m~~~R~y~s~~~- 157 (539)
....+|+.|++ |+.-... ...++..+..+|.||+ |.. ...++.||..++..-|+.- +...-. .+.++
T Consensus 454 ~l~A~D~~tG~~~W~~~~~~--~~~~g~~~tagg~vf~-gt~---dg~l~A~D~~tG~~lW~~~---l~~g~~-~~P~~y 523 (599)
T 1w6s_A 454 QIKAYNAITGDYKWEKMERF--AVWGGTMATAGDLVFY-GTL---DGYLKARDSDTGDLLWKFK---IPSGAI-GYPMTY 523 (599)
T ss_dssp EEEEECTTTCCEEEEEEESS--CCCSBCEEETTTEEEE-ECT---TSEEEEEETTTCCEEEEEE---CSSCCC-SCCEEE
T ss_pred eEEEEECCCCCEEeEecCCC--CccCcceEecCCEEEE-ECC---CCeEEEEECCCCCEEEEee---CCCCcE-eccEEE
Confidence 45668999886 6542211 1222334445666666 432 2578999998555568652 333222 12222
Q ss_pred ccCCcEEEE
Q 039705 158 LPDGSFIVV 166 (539)
Q Consensus 158 L~dG~Vyvv 166 (539)
..||++||+
T Consensus 524 ~~~G~qyv~ 532 (599)
T 1w6s_A 524 THKGTQYVA 532 (599)
T ss_dssp EETTEEEEE
T ss_pred EeCCEEEEE
Confidence 249999886
No 275
>2xzi_A KDNAse, extracellular sialidase/neuraminidase, putative; hydrolase; HET: KDM; 1.45A {Aspergillus fumigatus} PDB: 2xcy_A* 2xzj_A* 2xzk_A*
Probab=21.63 E-value=5.9e+02 Score=25.10 Aligned_cols=146 Identities=14% Similarity=0.014 Sum_probs=69.7
Q ss_pred EEEeeCCcEEEEEcCceeEe-eC--CCCeEEEEcccCCCCCCccCCCccEEecccccCCCCCCCcccEEEEecCCCCCcc
Q 039705 206 VFLSTDGNLFIFANDRSILL-NP--ETNEILHVFPILRGGSRNYPASATSALLPIKLQDPNSNAIRAEVLICGGAKPEAG 282 (539)
Q Consensus 206 ~~~~~~G~Iyv~Gg~~~e~y-Dp--~tn~W~~~~p~mp~~~r~yp~~g~av~lpl~~~~~~~~~~~g~Iyv~GG~~~~~~ 282 (539)
.+.+.+|+|++..- ...+| |- ...+|. ....++. . . ....+.+ -+|+||++--...+.
T Consensus 190 gI~l~dGrLv~p~~-~~~~~S~D~~~G~tW~-~~~~~~~-~-~---e~~vve~-----------~dG~L~~~~r~~~g~- 250 (386)
T 2xzi_A 190 GIRLTTGELVIPAM-GRNIIGRGAPGNRTWS-VQRLSGA-G-A---EGTIVQT-----------PDGKLYRNDRPSQKG- 250 (386)
T ss_dssp CEECTTSCEEEEET-TEEEEEESSTTSCEEE-EEECTTC-C-S---SEEEEEC-----------TTSCEEEEECCSSSE-
T ss_pred EEEecCCEEEEEeE-EEEEEccCCCCCCccc-ccCcCCC-C-C---cCEEEEe-----------CCCcEEEEEeCCCCc-
Confidence 35666899887654 33444 32 568997 4434432 1 1 1122322 168888875433110
Q ss_pred cccCCCcccccCCceEEEEeeCCCCceeee----ccCCCceeceeEEec--CCcEEEEcCcCCCCCCcccCCCCCCccEE
Q 039705 283 VLAGKGEFMNALQDCGRIEITNKSATWQRE----MMPSPRVMGEMLLLP--TGDVLIINGAKKGTAGWNFATDPNTTPVL 356 (539)
Q Consensus 283 ~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~----~M~~~R~~~~~vvlp--dG~I~vvGG~~~g~~g~~~~~~~~~~~e~ 356 (539)
....+.-.| .+|+.. .++.+.++...+.+. +.+++++....... .+. .+.+.+
T Consensus 251 -------------~r~v~~S~D--~tWt~~~~~~~l~~~~~~~~~i~~~~~~~~~ll~~~p~~~~-----~R~-~l~l~~ 309 (386)
T 2xzi_A 251 -------------YRMVARGTL--EGFGAFAPDAGLPDPACQGSVLRYNSDAPARTIFLNSASGT-----SRR-AMRVRI 309 (386)
T ss_dssp -------------EEEEEEEET--TEECCCEEEEEEEECSCCCEEEEEESSSSCEEEEEEECSSS-----CSC-CEEEEE
T ss_pred -------------cEEEEEEeC--CccCcccccCCCCCCCCccEEEEecCCCCCEEEEECCCCCC-----CCc-ceEEEE
Confidence 112233333 788853 355555555555452 34444544221000 111 122333
Q ss_pred EcCCCCC-CCceEecCCCCCCc-------cceeeEeeCCCCeEEEe
Q 039705 357 YEPDDPI-NERFSELTPTSKPR-------MCHSTSVVLPDGKILVA 394 (539)
Q Consensus 357 YdP~t~~-g~~Wt~~a~~~~~R-------~yhs~a~llpdG~V~v~ 394 (539)
.+|. |++|+..-...... ...++.+.++||+|+++
T Consensus 310 ---S~D~~G~tW~~~~~~~~g~~~~~~~~~~ys~l~~~~dg~l~~l 352 (386)
T 2xzi_A 310 ---SYDADAKKFNYGRKLEDAKVSGAGHEGGYSSMTKTGDYKIGAL 352 (386)
T ss_dssp ---ECSTTCCCCCCCEEGGGGCCSSSCEEEEEEEEEECTTSCEEEE
T ss_pred ---EcCCCCCccCCceEEecCCccccCCceEeceeEECCCCEEEEE
Confidence 2445 77997532221111 33344456789999776
No 276
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=21.28 E-value=2.1e+02 Score=29.92 Aligned_cols=104 Identities=10% Similarity=-0.062 Sum_probs=56.1
Q ss_pred cCCC-cEEEecCCCCCCCeEEEEeCCCCccceeecccccc-ccc--ccceeEEccCCcEEEEcCccCCeEEEE-ecCCCc
Q 039705 109 SANG-TIVISGGWSSRGRSVRYLSGCYHACYWKEHHWELS-AKR--WFSTQHILPDGSFIVVGGRREFSYEYI-LKEGKR 183 (539)
Q Consensus 109 l~dG-~l~v~GG~~~g~~~v~~ydP~~~t~~W~~~~~~m~-~~R--~y~s~~~L~dG~VyvvGG~~~~~~E~y-P~~~~~ 183 (539)
-.+| .++++|+.+ ..+++||.. +.+-. .. +. ..+ .-.+++.-+|++.++.|+.+ .++.+| .++.
T Consensus 319 s~~g~~~laS~S~D---~tvklWD~~--~~~~~--~~-~~~~~~~~~v~~v~fsp~~~~l~s~~~d-~tv~lwd~~~~-- 387 (524)
T 2j04_B 319 SDFEDTVVSTVAVD---GYFYIFNPK--DIATT--KT-TVSRFRGSNLVPVVYCPQIYSYIYSDGA-SSLRAVPSRAA-- 387 (524)
T ss_dssp CTTSCCEEEEEETT---SEEEEECGG--GHHHH--CE-EEEECSCCSCCCEEEETTTTEEEEECSS-SEEEEEETTCT--
T ss_pred CCCCCeEEEEeccC---CeEEEEECC--CCCcc--cc-cccccccCcccceEeCCCcCeEEEeCCC-CcEEEEECccc--
Confidence 3567 899998863 689999986 32211 00 11 111 11245566789998888765 356777 4332
Q ss_pred ceeeccCccccCCCCCCCCcceEEEeeCCcEEEEEcCc--eeEeeCCCC
Q 039705 184 IIYDLPILNETTNPSENNLYPFVFLSTDGNLFIFANDR--SILLNPETN 230 (539)
Q Consensus 184 ~w~~~~~l~~~~~~~~~~~yp~~~~~~~G~Iyv~Gg~~--~e~yDp~tn 230 (539)
.-. . .+....+ ..+ .+...++|++++.|+.+ +.+||+...
T Consensus 388 ~~~-~-~l~gH~~----~V~-sva~Sp~g~~l~Sgs~Dgtv~lwd~~~~ 429 (524)
T 2j04_B 388 FAV-H-PLVSRET----TIT-AIGVSRLHPMVLAGSADGSLIITNAARR 429 (524)
T ss_dssp TCC-E-EEEECSS----CEE-EEECCSSCCBCEEEETTTEEECCBSCSS
T ss_pred ccc-e-eeecCCC----ceE-EEEeCCCCCeEEEEECCCEEEEEechHh
Confidence 110 0 0111110 001 12234789988888754 667887543
No 277
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=20.85 E-value=2.8e+02 Score=29.35 Aligned_cols=76 Identities=13% Similarity=-0.006 Sum_probs=42.1
Q ss_pred eEEEEECCCCC--EEeCccCCCcccccceecCCCcEEEecCCCCCCCeEEEEeCCCCccceeecccccccccccceeEE-
Q 039705 81 LAVEYDAESAA--IRPLKILTDTWSSSGGLSANGTIVISGGWSSRGRSVRYLSGCYHACYWKEHHWELSAKRWFSTQHI- 157 (539)
Q Consensus 81 ~~~~yDp~t~~--w~~l~~~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydP~~~t~~W~~~~~~m~~~R~y~s~~~- 157 (539)
....+|+.|++ |+.-... ....+..+..+|.|++ |.. + ..++.||..++..-|+.- +...-. .+.++
T Consensus 467 ~l~A~D~~tG~~~W~~~~~~--~~~~g~~~tagglvf~-g~~-d--g~l~A~D~~tG~~lW~~~---~~~g~~-a~P~~y 536 (582)
T 1flg_A 467 SLRAMDPVSGKVVWEHKEHL--PLWAGVLATAGNLVFT-GTG-D--GYFKAFDAKSGKELWKFQ---TGSGIV-SPPITW 536 (582)
T ss_dssp EEEEECTTTCCEEEEEEESS--CCCSCCEEETTTEEEE-ECT-T--SEEEEEETTTCCEEEEEE---CSSCCC-SCCEEE
T ss_pred eEEEEECCCCCEEEEecCCC--CCcccceEeCCCEEEE-ECC-C--CcEEEEECCCCCEEEEec---CCCCcc-cCceEE
Confidence 45568999886 6542221 2223334455666666 432 2 578999988445568642 322221 12222
Q ss_pred ccCCcEEEE
Q 039705 158 LPDGSFIVV 166 (539)
Q Consensus 158 L~dG~Vyvv 166 (539)
-.||++||+
T Consensus 537 ~~~G~qYv~ 545 (582)
T 1flg_A 537 EQDGEQYLG 545 (582)
T ss_dssp EETTEEEEE
T ss_pred EECCEEEEE
Confidence 249999997
No 278
>4fj6_A Glycoside hydrolase family 33, candidate sialidas; bacterial neuraminidase repeat; HET: MSE GOL; 1.90A {Parabacteroides distasonis}
Probab=20.74 E-value=7.3e+02 Score=25.87 Aligned_cols=129 Identities=10% Similarity=0.072 Sum_probs=65.7
Q ss_pred EEEC-CCCCEEeCccCCCcccccc-eecCCCcEEEecC-CCCCCCeEEEEeCCCCccceeecc---cccccccccceeEE
Q 039705 84 EYDA-ESAAIRPLKILTDTWSSSG-GLSANGTIVISGG-WSSRGRSVRYLSGCYHACYWKEHH---WELSAKRWFSTQHI 157 (539)
Q Consensus 84 ~yDp-~t~~w~~l~~~~~~~c~~~-~~l~dG~l~v~GG-~~~g~~~v~~ydP~~~t~~W~~~~---~~m~~~R~y~s~~~ 157 (539)
+|.- .-.+|+....+....+... +-+.||+|++.-= ..++.+. +|--.+...+|++.. ..|+.+....+...
T Consensus 356 ~~S~D~G~TW~~~~~~~~~~~e~~vve~~dG~L~~~~R~~~~g~r~--v~~S~D~G~TWt~~~~~~~~L~~P~c~~Sii~ 433 (523)
T 4fj6_A 356 MYSKDRGKTWHLHNLARTNTTEAQVAEVEPGVLMLNMRDNRGGSRA--VATTKDLGKTWTEHPSSRSALQESVCMASLIK 433 (523)
T ss_dssp EEESSTTSSCEECCCSEETEEEEEEEEEETTEEEEEEEETTCSBCE--EEEESSTTSSCEECTTTTTSSBCSSCCCEEEE
T ss_pred EEECCCCCeEEECCCCCccccCCEEEEecCCEEEEEEEecCCCcEE--EEEECCCCCccCcCcCccccCCCCCcccEEEE
Confidence 4443 3468988765543222222 2345899998411 1112222 232222267899863 13666666655555
Q ss_pred cc-----C-CcEEEEcCccC----CeEEEE-ecCCCcceeecc-CccccCCCCCCCCcceEEEeeCCcEEEE
Q 039705 158 LP-----D-GSFIVVGGRRE----FSYEYI-LKEGKRIIYDLP-ILNETTNPSENNLYPFVFLSTDGNLFIF 217 (539)
Q Consensus 158 L~-----d-G~VyvvGG~~~----~~~E~y-P~~~~~~w~~~~-~l~~~~~~~~~~~yp~~~~~~~G~Iyv~ 217 (539)
+. + .+++++..-.. ....+| ...+..+|.... .+.... ..--||.+..+.||+|.++
T Consensus 434 ~~~~~~~~g~~~lL~snp~~~~~R~~l~v~~S~D~G~TW~~~~~v~~~~~---~~~~Ys~l~~~~dG~i~il 502 (523)
T 4fj6_A 434 VNAKDNITGKDLLLFSNPNTTKGRNHITIKASLDGGLTWPTEHQVLLDEA---EGWGYSCLSMIDKETVGIF 502 (523)
T ss_dssp ECGGGSTTCSCEEEEEEECCSSSSCCEEEEEESSTTSCCCGGGEEEEECS---CCCCCEEEEECSSSEEEEE
T ss_pred EecccCCCCCcEEEEEccCCCCccccceEEEeCCCCCCCccCceEEEcCC---CCcccceEEEcCCCEEEEE
Confidence 43 1 25666654221 234556 443355785322 211111 1235888888899998875
No 279
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=20.66 E-value=5e+02 Score=26.37 Aligned_cols=29 Identities=3% Similarity=-0.060 Sum_probs=20.5
Q ss_pred ceEEccCCCcccceEEEecCCCCEEEEEccc
Q 039705 21 KWELASENSGISAMHIILFPNTNKAIMLDAV 51 (539)
Q Consensus 21 ~W~~~~~~~~~~~~~~~ll~~~gkv~~~g~~ 51 (539)
+.+.++. -...+..++++ ++|++|+.++.
T Consensus 18 ~~~~~a~-~l~~P~~~a~~-pdG~l~V~e~~ 46 (454)
T 1cru_A 18 DKKVILS-NLNKPHALLWG-PDNQIWLTERA 46 (454)
T ss_dssp CEEEEEC-CCSSEEEEEEC-TTSCEEEEETT
T ss_pred EEEEEEC-CCCCceEEEEc-CCCcEEEEEcC
Confidence 4555553 24456788888 99999998763
No 280
>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}
Probab=20.19 E-value=1.2e+02 Score=30.21 Aligned_cols=72 Identities=15% Similarity=0.165 Sum_probs=39.5
Q ss_pred ceeEEecCCcEEEEcCcCCCCCCcccCCCCCCccEEEcCCCCCCCceEecCCCCCCccceeeEeeCCCCeEEEecCCCCC
Q 039705 321 GEMLLLPTGDVLIINGAKKGTAGWNFATDPNTTPVLYEPDDPINERFSELTPTSKPRMCHSTSVVLPDGKILVAGSNPHS 400 (539)
Q Consensus 321 ~~~vvlpdG~I~vvGG~~~g~~g~~~~~~~~~~~e~YdP~t~~g~~Wt~~a~~~~~R~yhs~a~llpdG~V~v~GG~~~~ 400 (539)
|.+++.-||+||..|-...|.-|.+.. .....+..-..-. +.+...++ .-.+|+++ |..||+||.-|-+...
T Consensus 276 hs~alt~~G~v~~wG~n~~GqLG~g~~-~~~~~P~~v~~l~--~~~v~~ia----~G~~h~~a-l~~~G~v~~wG~n~~G 347 (389)
T 3kci_A 276 FSVALTKSGAVYTWGKGDYHRLGHGSD-DHVRRPRQVQGLQ--GKKVIAIA----TGSLHCVC-CTEDGEVYTWGDNDEG 347 (389)
T ss_dssp EEEEEETTSCEEEEECCGGGTTCSSSC-CCEEEEEECGGGT--TCCEEEEE----ECSSEEEE-EETTCCEEEEECCTTS
T ss_pred EEEEEeCCCeEEEEeCCCCCCCCCCCC-ccccCCeEeccCC--CCCEEEEE----eccCeEEE-ECCCCCEEEeeCCCCC
Confidence 455667799999999655444332211 1111122211111 11344443 23567655 5689999999998665
Done!