Query 039707
Match_columns 536
No_of_seqs 189 out of 386
Neff 4.9
Searched_HMMs 29240
Date Mon Mar 25 21:35:53 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/039707.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/039707hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3i3n_A Kelch-like protein 11; 98.8 8.1E-09 2.8E-13 102.0 6.8 203 2-273 53-265 (279)
2 3hve_A Gigaxonin; ubiquitin, c 98.6 2.2E-08 7.7E-13 97.5 6.0 199 2-271 49-256 (256)
3 2vpk_A Myoneurin; transcriptio 98.5 1.7E-07 5.8E-12 80.8 5.9 75 2-86 40-116 (116)
4 2z8h_A Transcription regulator 98.4 3.3E-07 1.1E-11 81.7 7.4 80 2-89 54-134 (138)
5 3b84_A Zinc finger and BTB dom 98.4 1.4E-07 4.9E-12 82.0 4.8 76 2-87 42-117 (119)
6 1buo_A POZ domain, protein (pr 98.4 1.9E-07 6.3E-12 81.3 5.5 75 2-87 46-120 (121)
7 2vkp_A BTB/POZ domain-containi 98.4 2.7E-07 9.4E-12 78.1 5.8 78 2-87 30-108 (109)
8 3htm_A Speckle-type POZ protei 98.4 1E-06 3.4E-11 80.0 9.0 107 2-125 52-163 (172)
9 2if5_A Zinc finger and BTB dom 98.3 4.7E-07 1.6E-11 78.2 5.8 76 2-85 43-120 (120)
10 2ppi_A Gigaxonin; BTB domain, 98.3 7.4E-07 2.5E-11 80.4 6.8 76 2-85 65-144 (144)
11 2yy9_A Zinc finger and BTB dom 98.3 2.3E-07 7.8E-12 82.7 3.2 77 2-88 43-119 (135)
12 3ga1_A Nucleus accumbens-assoc 98.3 2.4E-07 8E-12 81.6 3.0 76 2-87 51-127 (129)
13 2q81_A MIZ-1 protein; BTB/POZ 98.3 5.1E-07 1.7E-11 78.5 5.1 73 2-85 45-117 (119)
14 3ohu_A Transcription regulator 98.3 2.2E-07 7.7E-12 81.0 2.7 66 2-69 50-116 (125)
15 1r29_A B-cell lymphoma 6 prote 98.3 1.1E-06 3.7E-11 76.8 6.5 77 2-86 47-125 (127)
16 4eoz_A Speckle-type POZ protei 98.2 4.6E-07 1.6E-11 80.1 3.2 95 2-113 43-139 (145)
17 2ihc_A Transcription regulator 98.2 5.4E-07 1.8E-11 78.8 2.1 76 2-85 47-123 (124)
18 3m5b_A Zinc finger and BTB dom 97.9 4.2E-06 1.4E-10 73.4 2.9 70 2-86 48-117 (119)
19 3fkc_A Transcriptional regulat 97.9 8.2E-06 2.8E-10 70.8 4.0 63 2-69 49-112 (116)
20 3hqi_A Speckle-type POZ protei 97.9 1.6E-05 5.4E-10 79.4 6.5 107 2-125 192-303 (312)
21 4ajy_C Transcription elongatio 95.8 0.014 4.6E-07 49.4 5.9 61 4-66 21-96 (97)
22 2ast_A S-phase kinase-associat 95.8 0.0049 1.7E-07 56.6 3.2 78 4-89 20-127 (159)
23 1fs1_B SKP1, cyclin A/CDK2-ass 93.0 0.1 3.4E-06 47.0 5.0 76 3-88 20-121 (141)
24 2p1m_A SKP1-like protein 1A; F 92.6 0.029 9.8E-07 51.7 0.8 76 4-88 23-125 (160)
25 3vmx_A Voltage-gated hydrogen 83.5 2.4 8.1E-05 32.1 5.6 33 456-488 7-39 (48)
26 3v7d_A Suppressor of kinetocho 79.4 2.1 7.1E-05 39.7 5.0 75 4-86 26-131 (169)
27 2yy0_A C-MYC-binding protein; 79.2 2.8 9.7E-05 32.1 4.9 32 454-485 19-51 (53)
28 2fnj_C Transcription elongatio 75.6 1.7 5.7E-05 36.6 2.9 62 4-67 20-96 (96)
29 3a2a_A Voltage-gated hydrogen 75.2 4.8 0.00016 31.3 5.0 33 456-488 14-46 (58)
30 1hv2_A Elongin C, ELC1; protei 62.1 3.5 0.00012 34.9 2.1 62 4-67 23-99 (99)
31 3vp9_A General transcriptional 59.0 9.7 0.00033 32.5 4.2 25 460-484 50-74 (92)
32 3b0b_C CENP-X, centromere prot 56.4 11 0.00037 31.3 4.0 43 295-337 6-48 (81)
33 1vjh_A BET V I allergen family 50.5 8 0.00027 33.6 2.5 31 338-382 92-122 (122)
34 1vcb_B Protein (elongin C); tu 49.9 4.8 0.00016 34.9 1.0 62 4-67 36-112 (112)
35 4dra_E Centromere protein X; D 47.1 12 0.00043 31.2 3.0 43 295-337 10-52 (84)
36 1deb_A APC protein, adenomatou 44.9 46 0.0016 25.4 5.5 36 451-486 14-50 (54)
37 1dip_A Delta-sleep-inducing pe 44.4 22 0.00076 29.2 3.9 31 453-483 14-45 (78)
38 1pd7_B MAD1; PAH2, SIN3, eukar 38.9 12 0.00041 24.8 1.3 17 53-69 3-19 (26)
39 1ci6_A Transcription factor AT 26.4 1.1E+02 0.0038 23.7 5.3 28 456-483 33-60 (63)
40 2xv5_A Lamin-A/C; structural p 25.8 85 0.0029 25.4 4.6 29 458-486 3-31 (74)
41 3v9r_B MHF2, uncharacterized p 25.5 36 0.0012 28.7 2.4 38 300-337 4-41 (88)
42 1go4_E MAD1 (mitotic arrest de 24.5 82 0.0028 27.1 4.5 26 461-486 13-38 (100)
43 1e09_A PRU AV 1; allergen, maj 21.4 58 0.002 29.1 3.1 35 338-383 123-157 (159)
44 1dh3_A Transcription factor CR 20.3 1.3E+02 0.0046 22.7 4.5 28 459-486 21-48 (55)
No 1
>3i3n_A Kelch-like protein 11; structural genomics, BTB, KLHL11A, SGC, structural genomics consortium, kelch repeat, secreted, protein binding; 2.60A {Homo sapiens} PDB: 4ap2_A* 4apf_A
Probab=98.75 E-value=8.1e-09 Score=101.97 Aligned_cols=203 Identities=16% Similarity=0.172 Sum_probs=138.7
Q ss_pred ccccchhHHHHHHhhCCC--CCceeeccCC----CCChHHHHHHHHHhcCCCcccCCCchHHHHhhHhhhccccccCCCc
Q 039707 2 LLASKSAKVAAILDENPN--QDLSYFLRDI----SPDTETFELVLRFCHGFEPQISTENVIPIIGLADYLEMTEAHCRNN 75 (536)
Q Consensus 2 ~L~srSg~l~rli~~~~~--~~~~i~l~df----PGGaeaFEl~akFCYG~~i~lt~~NVa~LrCAAeyLeMtE~~~~~N 75 (536)
+|+++|.|++.++...-. ....|.|+++ .-.+++|+.+.+|+|++++.+++.||..|..||.+|+|++
T Consensus 53 vLaa~S~yF~~mf~~~~~e~~~~~i~l~~~~~~~~v~~~~f~~ll~~~Ytg~~~i~~~~v~~ll~~A~~l~i~~------ 126 (279)
T 3i3n_A 53 VLAAATEYFTPLLSGQFSESRSGRVEMRKWSSEPGPEPDTVEAVIEYMYTGRIRVSTGSVHEVLELADRFLLIR------ 126 (279)
T ss_dssp HHHHHCTTSGGGCCC--------EEECCCCSSTTCSCHHHHHHHHHHHHHSEEEEETTTHHHHHHHHHHTTCHH------
T ss_pred HHHHcCHHHHHHhcCCCccccCCeEEeccccccCCCCHHHHHHHHHhhCcCCcccCHHHHHHHHHHHHHHCcHH------
Confidence 578899999999875421 3357888877 4478999999999999999999999999999999999985
Q ss_pred hHHHHHHHhhhccCCChHHHHHHHHHhhhhhhhhhhhc---hHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCCCCCcccc
Q 039707 76 LLRRALIFFEQEVLPSWNETIKALRVADDFLQQAVQLG---LVDACFRSLIEKAVADPHLLGAPMKNLSCDEDSEDADDA 152 (536)
Q Consensus 76 Li~ktE~FL~~~vl~sW~dsi~vLksce~llp~AE~l~---Iv~RCidsla~ka~~d~~~~~~p~~~~~s~~~~~~~~~~ 152 (536)
|....+.||.+.+-. .+|-.++.+|+..+ +.++|.+-|+..... .
T Consensus 127 L~~~c~~~L~~~l~~---------~n~~~i~~~A~~~~~~~L~~~~~~~i~~~f~~---v-------------------- 174 (279)
T 3i3n_A 127 LKEFCGEFLKKKLHL---------SNCVAIHSLAHMYTLSQLALKAADMIRRNFHK---V-------------------- 174 (279)
T ss_dssp HHHHHHHHHHHHCCT---------TTHHHHHHHHHHTTCHHHHHHHHHHHHHTHHH---H--------------------
T ss_pred HHHHHHHHHHHcCCc---------chHHHHHHHHHHcCcHHHHHHHHHHHHHHHHH---H--------------------
Confidence 999999999885433 24556666777665 567777777654410 0
Q ss_pred CCCcccCCCCCCCceeeecccCChHHHHHHHHHHHhCCCC-hhhHHHHHHHHHHhhhcCCCCCCCcccchhhhhhhhHHH
Q 039707 153 YRPNARRKLFVIDWKSEDLTVLSLQLFDAIIRSMNQHGVP-PEFVASSVCQYTKRWVLSSTVGDETVSIYKRKTQRDVLE 231 (536)
Q Consensus 153 ~~~~~~~~~~~~dWW~eDl~~L~~~lf~rvI~am~~~g~~-~~~i~~~l~~Ya~k~lp~~~~~~~~~~~~~~~~qr~llE 231 (536)
+-.++...|+.+....++..=.- .++ .+.|-.+++.|++.-. ..++..+.
T Consensus 175 -------------~~~~~f~~L~~~~l~~lL~~d~L-~v~sE~~vf~av~~W~~~~~---------------~~r~~~~~ 225 (279)
T 3i3n_A 175 -------------IQDEEFYTLPFHLIRDWLSDLEI-TVDSEEVLFETVLKWVQRNA---------------EERERYFE 225 (279)
T ss_dssp -------------TTSSGGGGSCHHHHHHHHTCSSC-CCSCHHHHHHHHHHHHHTTH---------------HHHTTTHH
T ss_pred -------------hcCcChhcCCHHHHHHHhcCcCC-CCCCHHHHHHHHHHHHHcCH---------------HHHHHHHH
Confidence 00145567888877776653111 133 4456666666655321 12223334
Q ss_pred HHHhhCCCCCCCcchHHHHHHHHHHHhhcCCHHHHHHHHHHH
Q 039707 232 AVEKLLPYERGLVPCTLLFEMLRYAIVLEASSDCRTGFEIRI 273 (536)
Q Consensus 232 ~iv~LLP~~k~~vsc~fLf~LLR~A~~l~as~~cr~~LE~rI 273 (536)
.+...+-. ..+|..+|..+++..-.+..++.|+.-+..-.
T Consensus 226 ~ll~~VRf--~l~~~~~L~~~v~~~~l~~~~~~c~~~l~ea~ 265 (279)
T 3i3n_A 226 ELFKLLRL--SQMKPTYLTRHVKPERLVANNEVCVKLVADAV 265 (279)
T ss_dssp HHHTTSCG--GGSCHHHHHHTTTTSHHHHTCHHHHHHHHHHH
T ss_pred HHHHhcCC--CCCCHHHHHHHhhccchhcCCHHHHHHHHHHH
Confidence 44333211 55889999999988888888999988776543
No 2
>3hve_A Gigaxonin; ubiquitin, cytoplasm, cytoskeleton, disease mutation, kelch repeat, neurodegeneration, phosphoprotein, polymorphism, UBL conjugation; 2.80A {Homo sapiens} PDB: 3hve_B
Probab=98.64 E-value=2.2e-08 Score=97.46 Aligned_cols=199 Identities=18% Similarity=0.195 Sum_probs=121.2
Q ss_pred ccccchhHHHHHHhhCC----CCCceeeccCCCCChHHHHHHHHHhcCCCcccCCCchHHHHhhHhhhccccccCCCchH
Q 039707 2 LLASKSAKVAAILDENP----NQDLSYFLRDISPDTETFELVLRFCHGFEPQISTENVIPIIGLADYLEMTEAHCRNNLL 77 (536)
Q Consensus 2 ~L~srSg~l~rli~~~~----~~~~~i~l~dfPGGaeaFEl~akFCYG~~i~lt~~NVa~LrCAAeyLeMtE~~~~~NLi 77 (536)
+|+++|.|++.++.... .....|.|+|++ +++|+.+.+|+|++++++++.||..|..||.+|+|.+ |.
T Consensus 49 vLaa~S~yF~~mf~~~~~~~e~~~~~i~l~~v~--~~~f~~ll~~~Yt~~~~i~~~~v~~ll~~A~~l~i~~------l~ 120 (256)
T 3hve_A 49 ILAAASPYIRTKLNYNPPKDDGSTYKIELEGIS--VMVMREILDYIFSGQIRLNEDTIQDVVQAADLLLLTD------LK 120 (256)
T ss_dssp HHHTTCHHHHHTC-----------CEEECSSCC--HHHHHHHHHHHHHSCCCCC-CCHHHHHHHHHHHTCHH------HH
T ss_pred HHHHcCHHHHHHhCCCCCcccCCCCeEEeCCCC--HHHHHHHHhhccCCCCcccHhHHHHHHHHHHHHChHH------HH
Confidence 57899999999997532 133578888875 8999999999999999999999999999999999996 99
Q ss_pred HHHHHHhhhccCCChHHHHHHHHHhhhhhhhhhhhc---hHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCCCCCccccCC
Q 039707 78 RRALIFFEQEVLPSWNETIKALRVADDFLQQAVQLG---LVDACFRSLIEKAVADPHLLGAPMKNLSCDEDSEDADDAYR 154 (536)
Q Consensus 78 ~ktE~FL~~~vl~sW~dsi~vLksce~llp~AE~l~---Iv~RCidsla~ka~~d~~~~~~p~~~~~s~~~~~~~~~~~~ 154 (536)
...+.||.+.+-.+ +|-.++.+|+..+ +...|.+-|+.....=.
T Consensus 121 ~~c~~~L~~~l~~~---------n~~~i~~~A~~~~~~~L~~~~~~~i~~~f~~v~------------------------ 167 (256)
T 3hve_A 121 TLCCEFLEGCIAAE---------NCIGIRDFALHYCLHHVHYLATEYLETHFRDVS------------------------ 167 (256)
T ss_dssp HHHHHHHHHTCCSS---------TTHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHT------------------------
T ss_pred HHHHHHHHhhCCHh---------hHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHh------------------------
Confidence 99999999865332 4455555666654 56678777766542100
Q ss_pred CcccCCCCCCCceeeecccCChHHHHHHHHHHHhCCCC-hhhHHHHHHHHHHhhhcCCCCCCCcccchhhhhhhhHHHHH
Q 039707 155 PNARRKLFVIDWKSEDLTVLSLQLFDAIIRSMNQHGVP-PEFVASSVCQYTKRWVLSSTVGDETVSIYKRKTQRDVLEAV 233 (536)
Q Consensus 155 ~~~~~~~~~~dWW~eDl~~L~~~lf~rvI~am~~~g~~-~~~i~~~l~~Ya~k~lp~~~~~~~~~~~~~~~~qr~llE~i 233 (536)
-.++...|+.+....++..=.-. ++ .+.|-.+ +.+|+...... -...-..|++.|
T Consensus 168 ------------~~~~f~~L~~~~l~~lL~~d~L~-v~~E~~v~~a----v~~W~~~~~~~-------R~~~~~~ll~~V 223 (256)
T 3hve_A 168 ------------STEEFLELSPQKLKEVISLEKLN-VGNERYVFEA----VIRWIAHDTEI-------RKVHMKDVMSAL 223 (256)
T ss_dssp ------------TCHHHHSSCHHHHHHHHHCC--------CTTHHH----HTTTCCC--CC-------STTTHHHHHHHH
T ss_pred ------------CCcchhcCCHHHHHHHHccCCCC-CCCHHHHHHH----HHHHHHcCHHH-------HHHHHHHHHHhC
Confidence 01455688988888877631111 22 2334444 44665432110 011224566665
Q ss_pred HhhCCCCCCCcchHHHHHHHHHHHhhcCC-HHHHHHHHH
Q 039707 234 EKLLPYERGLVPCTLLFEMLRYAIVLEAS-SDCRTGFEI 271 (536)
Q Consensus 234 v~LLP~~k~~vsc~fLf~LLR~A~~l~as-~~cr~~LE~ 271 (536)
= + ..+|..+|...+...-.+..+ +.||.-|++
T Consensus 224 R-f-----~~l~~~~l~~~v~~~~l~~~~~~~c~~ll~~ 256 (256)
T 3hve_A 224 W-V-----SGLDSSYLREQMLNEPLVREIVKECSNIPLS 256 (256)
T ss_dssp H-H-----HTTCC-CHHHHHHTSTTHHHHHCC-------
T ss_pred C-C-----CCCCHHHHHHHHhcChHHHhhHHHHHHHhhC
Confidence 2 2 224455777777666666666 578887764
No 3
>2vpk_A Myoneurin; transcription regulation, transcription, metal-binding, alternative splicing, zinc, nucleus, BTB domain, zinc-finger, DNA-binding; 2.00A {Homo sapiens}
Probab=98.46 E-value=1.7e-07 Score=80.75 Aligned_cols=75 Identities=28% Similarity=0.364 Sum_probs=64.3
Q ss_pred ccccchhHHHHHHhhCCCCCceeecc--CCCCChHHHHHHHHHhcCCCcccCCCchHHHHhhHhhhccccccCCCchHHH
Q 039707 2 LLASKSAKVAAILDENPNQDLSYFLR--DISPDTETFELVLRFCHGFEPQISTENVIPIIGLADYLEMTEAHCRNNLLRR 79 (536)
Q Consensus 2 ~L~srSg~l~rli~~~~~~~~~i~l~--dfPGGaeaFEl~akFCYG~~i~lt~~NVa~LrCAAeyLeMtE~~~~~NLi~k 79 (536)
+|+++|.+++.++...+ ...|.|+ |+ .+++|+.+.+|+|++++.+++.||..|..||++++|.+ |...
T Consensus 40 vLaa~S~yF~~~f~~~~--~~~i~l~~~~~--~~~~f~~ll~~~Yt~~~~~~~~~v~~ll~~A~~~~i~~------L~~~ 109 (116)
T 2vpk_A 40 VLASFSEYFGAIYRSTS--ENNVFLDQSQV--KADGFQKLLEFIYTGTLNLDSWNVKEIHQAADYLKVEE------VVTK 109 (116)
T ss_dssp HHHHHCHHHHHHHTTCC--CSCEECCTTTC--CHHHHHHHHHHHHHSCCCCCTTTHHHHHHHHHHTTCHH------HHHH
T ss_pred HHhhcCHHHHHHHcCCC--CCeEEeecCCC--CHHHHHHHHHHHcCCCcccCHHHHHHHHHHHHHhCCHH------HHHH
Confidence 57899999999998763 2345555 55 58999999999999999999999999999999999985 9999
Q ss_pred HHHHhhh
Q 039707 80 ALIFFEQ 86 (536)
Q Consensus 80 tE~FL~~ 86 (536)
.+.||.+
T Consensus 110 C~~~l~~ 116 (116)
T 2vpk_A 110 CKIKMED 116 (116)
T ss_dssp HHHHHC-
T ss_pred HHHHHhC
Confidence 9999863
No 4
>2z8h_A Transcription regulator protein BACH1; BTB, POZ, disulfide bond, activator, DNA-binding, nucleus, phosphorylation, repressor; 2.50A {Mus musculus}
Probab=98.44 E-value=3.3e-07 Score=81.67 Aligned_cols=80 Identities=18% Similarity=0.312 Sum_probs=69.6
Q ss_pred ccccchhHHHHHHhhCCCCCceeecc-CCCCChHHHHHHHHHhcCCCcccCCCchHHHHhhHhhhccccccCCCchHHHH
Q 039707 2 LLASKSAKVAAILDENPNQDLSYFLR-DISPDTETFELVLRFCHGFEPQISTENVIPIIGLADYLEMTEAHCRNNLLRRA 80 (536)
Q Consensus 2 ~L~srSg~l~rli~~~~~~~~~i~l~-dfPGGaeaFEl~akFCYG~~i~lt~~NVa~LrCAAeyLeMtE~~~~~NLi~kt 80 (536)
+|+++|.+|+.++.....+...|.|+ +++ +++|+.+.+|+|++++.+++.||..|..||++|+|.+ |....
T Consensus 54 vLaa~S~yF~~~f~~~~~e~~~i~l~~~v~--~~~~~~lL~~~Ytg~~~i~~~~v~~ll~~A~~~~i~~------L~~~C 125 (138)
T 2z8h_A 54 VLAACSSYFHSRIVGQTDAELTVTLPEEVT--VKGFEPLIQFAYTAKLILSKDNVDEVCRCVEFLSVHN------IEESC 125 (138)
T ss_dssp HHHHHCHHHHHHHTTCCCTTEEEECCTTSC--HHHHHHHHHHHHHSCCCCCTTTHHHHHHHHHHHTCGG------GHHHH
T ss_pred HHHHcCHHHHHHHhcCCCCCceEEeCCCCC--HHHHHHHHHHhcCCCcccCHHHHHHHHHHHHHhCCHH------HHHHH
Confidence 57899999999998765444577774 554 8999999999999999999999999999999999986 99999
Q ss_pred HHHhhhccC
Q 039707 81 LIFFEQEVL 89 (536)
Q Consensus 81 E~FL~~~vl 89 (536)
+.||.+.+-
T Consensus 126 ~~~l~~~l~ 134 (138)
T 2z8h_A 126 FQFLKFKFL 134 (138)
T ss_dssp HHHTTCCCS
T ss_pred HHHHHHhcc
Confidence 999988653
No 5
>3b84_A Zinc finger and BTB domain-containing protein 48; krueppel related zinc finger protein 3, HKR3, ZBTB48, Z finger, oncogene; 1.74A {Homo sapiens}
Probab=98.43 E-value=1.4e-07 Score=81.97 Aligned_cols=76 Identities=20% Similarity=0.138 Sum_probs=66.2
Q ss_pred ccccchhHHHHHHhhCCCCCceeeccCCCCChHHHHHHHHHhcCCCcccCCCchHHHHhhHhhhccccccCCCchHHHHH
Q 039707 2 LLASKSAKVAAILDENPNQDLSYFLRDISPDTETFELVLRFCHGFEPQISTENVIPIIGLADYLEMTEAHCRNNLLRRAL 81 (536)
Q Consensus 2 ~L~srSg~l~rli~~~~~~~~~i~l~dfPGGaeaFEl~akFCYG~~i~lt~~NVa~LrCAAeyLeMtE~~~~~NLi~ktE 81 (536)
+|+++|.+++.++.... ...|.|+|++ +++|+.+.+|+|++++++++.||..|..||++++|.+ |....+
T Consensus 42 vLaa~S~yF~~~f~~~~--~~~i~l~~~~--~~~f~~ll~~iYtg~~~~~~~~v~~ll~~A~~~~i~~------L~~~C~ 111 (119)
T 3b84_A 42 VLACCSHFFQSLYGDGS--GGSVVLPAGF--AEIFGLLLDFFYTGHLALTSGNRDQVLLAARELRVPE------AVELCQ 111 (119)
T ss_dssp HHHHHCHHHHHHHTTTT--CCCEEECGGG--HHHHHHHHHHHHHSCCCCCTTTHHHHHHHHHHTTCHH------HHHHHH
T ss_pred HHhhcCHHHHHHHCCCC--CCeEEeCCCC--HHHHHHHHHHHcCCCCccCHHHHHHHHHHHHHhCcHH------HHHHHH
Confidence 57899999999998654 3478888887 8999999999999999999999999999999999986 999999
Q ss_pred HHhhhc
Q 039707 82 IFFEQE 87 (536)
Q Consensus 82 ~FL~~~ 87 (536)
.||.+.
T Consensus 112 ~~l~~~ 117 (119)
T 3b84_A 112 SFKPKT 117 (119)
T ss_dssp HCC---
T ss_pred HHHHHc
Confidence 999763
No 6
>1buo_A POZ domain, protein (promyelocytic leukemia zinc finger prote; protein-protein interaction domain, transcriptional represso finger protein; 1.90A {Homo sapiens} SCOP: d.42.1.1 PDB: 1cs3_A
Probab=98.43 E-value=1.9e-07 Score=81.34 Aligned_cols=75 Identities=24% Similarity=0.312 Sum_probs=67.6
Q ss_pred ccccchhHHHHHHhhCCCCCceeeccCCCCChHHHHHHHHHhcCCCcccCCCchHHHHhhHhhhccccccCCCchHHHHH
Q 039707 2 LLASKSAKVAAILDENPNQDLSYFLRDISPDTETFELVLRFCHGFEPQISTENVIPIIGLADYLEMTEAHCRNNLLRRAL 81 (536)
Q Consensus 2 ~L~srSg~l~rli~~~~~~~~~i~l~dfPGGaeaFEl~akFCYG~~i~lt~~NVa~LrCAAeyLeMtE~~~~~NLi~ktE 81 (536)
+|+++|.++++++... ...|.|+|++ +++|+.+.+|+|++++.+++.|+..|..||++++|++ |....+
T Consensus 46 vLaa~S~yF~~~f~~~---~~~i~l~~~~--~~~f~~ll~~~Ytg~~~~~~~~~~~ll~~A~~~~i~~------L~~~c~ 114 (121)
T 1buo_A 46 VLACTSKMFEILFHRN---SQHYTLDFLS--PKTFQQILEYAYTATLQAKAEDLDDLLYAAEILEIEY------LEEQCL 114 (121)
T ss_dssp HHHHHCHHHHHHTTSC---CSEEEECSSC--HHHHHHHHHHHHHSCCCCCGGGHHHHHHHHHHHTCHH------HHHHHH
T ss_pred HHhhcCHHHHHHHcCC---CcEEEeCCCC--HHHHHHHHHhhcCCCcCCCHHHHHHHHHHHHHHCCHH------HHHHHH
Confidence 5789999999999864 2478888886 8999999999999999999999999999999999985 999999
Q ss_pred HHhhhc
Q 039707 82 IFFEQE 87 (536)
Q Consensus 82 ~FL~~~ 87 (536)
.||.+.
T Consensus 115 ~~l~~~ 120 (121)
T 1buo_A 115 KMLETI 120 (121)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 999864
No 7
>2vkp_A BTB/POZ domain-containing protein 6; protein-binding; 1.9A {Homo sapiens}
Probab=98.41 E-value=2.7e-07 Score=78.13 Aligned_cols=78 Identities=17% Similarity=0.249 Sum_probs=65.8
Q ss_pred ccccchhHHHHHHhhCCC-CCceeeccCCCCChHHHHHHHHHhcCCCcccCCCchHHHHhhHhhhccccccCCCchHHHH
Q 039707 2 LLASKSAKVAAILDENPN-QDLSYFLRDISPDTETFELVLRFCHGFEPQISTENVIPIIGLADYLEMTEAHCRNNLLRRA 80 (536)
Q Consensus 2 ~L~srSg~l~rli~~~~~-~~~~i~l~dfPGGaeaFEl~akFCYG~~i~lt~~NVa~LrCAAeyLeMtE~~~~~NLi~kt 80 (536)
+|.++|.++++++...-. ....|.|+|++ +++|+.+.+|+|+.++.+++.||..|..+|++++|++ |...+
T Consensus 30 iLa~~S~~F~~~f~~~~~e~~~~i~l~~~~--~~~f~~~l~~iYt~~~~~~~~~~~~ll~~A~~~~~~~------L~~~c 101 (109)
T 2vkp_A 30 VLAVGSSVFYAMFYGDLAEVKSEIHIPDVE--PAAFLILLKYMYSDEIDLEADTVLATLYAAKKYIVPA------LAKAC 101 (109)
T ss_dssp HHHHHCHHHHHHHC------CCEEEETTSC--HHHHHHHHHHHHHCCCCCCTTTHHHHHHHHHHTTCHH------HHHHH
T ss_pred HHHHcCHHHHHHhcCCcccCCCeEEeCCCC--HHHHHHHHHHHcCCCccCCHHHHHHHHHHHHHhCcHH------HHHHH
Confidence 578899999999985422 22678887764 8999999999999999999999999999999999985 99999
Q ss_pred HHHhhhc
Q 039707 81 LIFFEQE 87 (536)
Q Consensus 81 E~FL~~~ 87 (536)
+.||.+.
T Consensus 102 ~~~l~~~ 108 (109)
T 2vkp_A 102 VNFLETS 108 (109)
T ss_dssp HHHHHHH
T ss_pred HHHHHhh
Confidence 9999763
No 8
>3htm_A Speckle-type POZ protein; BTB, SPOP, ubiquitin, ligase, nucleus, UBL conjugation pathway, protein binding; 2.50A {Homo sapiens}
Probab=98.37 E-value=1e-06 Score=80.04 Aligned_cols=107 Identities=14% Similarity=0.089 Sum_probs=84.1
Q ss_pred ccccchhHHHHHHhhCCC--CCceeeccCCCCChHHHHHHHHHhcCCCcccCCCchHHHHhhHhhhccccccCCCchHHH
Q 039707 2 LLASKSAKVAAILDENPN--QDLSYFLRDISPDTETFELVLRFCHGFEPQISTENVIPIIGLADYLEMTEAHCRNNLLRR 79 (536)
Q Consensus 2 ~L~srSg~l~rli~~~~~--~~~~i~l~dfPGGaeaFEl~akFCYG~~i~lt~~NVa~LrCAAeyLeMtE~~~~~NLi~k 79 (536)
+|.++|.+|++++...-. ....|.|+|++ +++|+.+.+|+|+.++.+++.|+..|..+|++++|.+ |...
T Consensus 52 iL~~~S~~F~~~f~~~~~e~~~~~i~l~~~~--~~~f~~~l~~~Yt~~~~~~~~~~~~ll~~A~~~~~~~------l~~~ 123 (172)
T 3htm_A 52 ILAARSPVFSAMFEHEMEESKKNRVEINDVE--PEVFKEMMCFIYTGKAPNLDKMADDLLAAADKYALER------LKVM 123 (172)
T ss_dssp HHHHHCHHHHHHHHSCCCGGGTTEEEECSSC--HHHHHHHHHHHHHSCCTTGGGTHHHHHHHHHHTTCHH------HHHH
T ss_pred HHHHcCHHHHHHHccCccccCCCeEEecCCC--HHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHhCcHH------HHHH
Confidence 578999999999986432 33588888875 8999999999999999999999999999999999985 9999
Q ss_pred HHHHhhhccCCChHHHHHHHHHhhhhhhhhhhhc---hHHHHHHHHHHH
Q 039707 80 ALIFFEQEVLPSWNETIKALRVADDFLQQAVQLG---LVDACFRSLIEK 125 (536)
Q Consensus 80 tE~FL~~~vl~sW~dsi~vLksce~llp~AE~l~---Iv~RCidsla~k 125 (536)
++.||.+.+- -. +|-.++.+|+..+ +...|++-|+..
T Consensus 124 c~~~l~~~l~--~~-------n~~~~~~~A~~~~~~~L~~~~~~~i~~~ 163 (172)
T 3htm_A 124 CEDALCSNLS--VE-------NAAEILILADLHSADQLKTQAVDFINYH 163 (172)
T ss_dssp HHHHHHHTCC--TT-------THHHHHHHHHHTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHhCC--HH-------HHHHHHHHHHHhCcHHHHHHHHHHHHHH
Confidence 9999998542 22 3444555555543 566777776653
No 9
>2if5_A Zinc finger and BTB domain-containing protein 7A; POZ domain, POK, proto oncogene, transcription F transcription; 2.00A {Homo sapiens} PDB: 2nn2_A
Probab=98.34 E-value=4.7e-07 Score=78.24 Aligned_cols=76 Identities=21% Similarity=0.238 Sum_probs=65.2
Q ss_pred ccccchhHHHHHHhhCCC--CCceeeccCCCCChHHHHHHHHHhcCCCcccCCCchHHHHhhHhhhccccccCCCchHHH
Q 039707 2 LLASKSAKVAAILDENPN--QDLSYFLRDISPDTETFELVLRFCHGFEPQISTENVIPIIGLADYLEMTEAHCRNNLLRR 79 (536)
Q Consensus 2 ~L~srSg~l~rli~~~~~--~~~~i~l~dfPGGaeaFEl~akFCYG~~i~lt~~NVa~LrCAAeyLeMtE~~~~~NLi~k 79 (536)
+|.++|.+++.++...-. ....|.|+|++ +++|+.+.+|+|.+++.+++.|+..|..||++++|.+ |...
T Consensus 43 vLaa~S~~F~~~f~~~~~e~~~~~i~l~~~~--~~~f~~ll~~~Yt~~~~~~~~~~~~ll~~A~~~~i~~------L~~~ 114 (120)
T 2if5_A 43 VLAACSQYFKKLFTSGAVVDQQNVYEIDFVS--AEALTALMDFAYTATLTVSTANVGDILSAARLLEIPA------VSHV 114 (120)
T ss_dssp HHHHHCHHHHHHHHC-----CCSEEECCSSC--HHHHHHHHHHHHHSCCCCCGGGHHHHHHHHHHTTCHH------HHHH
T ss_pred HHHHhCHHHHHHhcCCccccCCceEEeCCCC--HHHHHHHHHHHcCCCCccCHHHHHHHHHHHHHhCCHH------HHHH
Confidence 578899999999985422 33578888765 8999999999999999999999999999999999986 9999
Q ss_pred HHHHhh
Q 039707 80 ALIFFE 85 (536)
Q Consensus 80 tE~FL~ 85 (536)
.+.||+
T Consensus 115 C~~~L~ 120 (120)
T 2if5_A 115 CADLLD 120 (120)
T ss_dssp HHHHHC
T ss_pred HHHHhC
Confidence 999984
No 10
>2ppi_A Gigaxonin; BTB domain, protein degradation, structural genomics, struct genomics consortium, SGC, structural protein; 2.40A {Homo sapiens}
Probab=98.32 E-value=7.4e-07 Score=80.39 Aligned_cols=76 Identities=22% Similarity=0.320 Sum_probs=66.0
Q ss_pred ccccchhHHHHHHhhCC----CCCceeeccCCCCChHHHHHHHHHhcCCCcccCCCchHHHHhhHhhhccccccCCCchH
Q 039707 2 LLASKSAKVAAILDENP----NQDLSYFLRDISPDTETFELVLRFCHGFEPQISTENVIPIIGLADYLEMTEAHCRNNLL 77 (536)
Q Consensus 2 ~L~srSg~l~rli~~~~----~~~~~i~l~dfPGGaeaFEl~akFCYG~~i~lt~~NVa~LrCAAeyLeMtE~~~~~NLi 77 (536)
+|+++|.+|+.++.... .....|.|+|++ +++|+.+.+|+|.+++.+++.||..|..||++|+|.+ |.
T Consensus 65 vLaa~S~yF~~mf~~~~~e~e~~~~~I~l~~v~--~~~f~~lL~fiYtg~~~i~~~~v~~ll~~A~~l~i~~------L~ 136 (144)
T 2ppi_A 65 ILAAASPYIRTKLNYNPPKDDGSTYKIELEGIS--VMVMREILDYIFSGQIRLNEDTIQDVVQAADLLLLTD------LK 136 (144)
T ss_dssp HHHHHCHHHHHHHHHCC-----CCCEEECCSSC--HHHHHHHHHHHTTSCCCCCTTTHHHHHHHHHHTTCHH------HH
T ss_pred HHHHcCHHHHHHHcCCCccccCCCcEEEeCCCC--HHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHhCcHH------HH
Confidence 57889999999997542 134578888876 8999999999999999999999999999999999986 99
Q ss_pred HHHHHHhh
Q 039707 78 RRALIFFE 85 (536)
Q Consensus 78 ~ktE~FL~ 85 (536)
...+.||.
T Consensus 137 ~~C~~~L~ 144 (144)
T 2ppi_A 137 TLCCEFLE 144 (144)
T ss_dssp HHHHTTC-
T ss_pred HHHHHHhC
Confidence 99998873
No 11
>2yy9_A Zinc finger and BTB domain-containing protein 48; mouse, HKR3, structural genomics, NPPSFA; 2.60A {Mus musculus}
Probab=98.31 E-value=2.3e-07 Score=82.66 Aligned_cols=77 Identities=22% Similarity=0.140 Sum_probs=64.9
Q ss_pred ccccchhHHHHHHhhCCCCCceeeccCCCCChHHHHHHHHHhcCCCcccCCCchHHHHhhHhhhccccccCCCchHHHHH
Q 039707 2 LLASKSAKVAAILDENPNQDLSYFLRDISPDTETFELVLRFCHGFEPQISTENVIPIIGLADYLEMTEAHCRNNLLRRAL 81 (536)
Q Consensus 2 ~L~srSg~l~rli~~~~~~~~~i~l~dfPGGaeaFEl~akFCYG~~i~lt~~NVa~LrCAAeyLeMtE~~~~~NLi~ktE 81 (536)
+|+++|.+++.++.... ...|.|+|++ +++|+.+.+|+|..+++++..||..|..||++|+|.+ |....+
T Consensus 43 vLaa~S~yF~~mf~~~~--~~~i~l~~~~--~~~f~~lL~fiYtg~~~i~~~~v~~ll~~A~~l~i~~------L~~~C~ 112 (135)
T 2yy9_A 43 VLACCSHFFQRIYGDGT--GGSVVLPAGF--AEIFGLLLDFFYTGHLALTSGNRDQVLLAAKELRVPE------AVELCQ 112 (135)
T ss_dssp HHHHHCHHHHHTCC------CCEEECGGG--HHHHHHHHHHHHHSCCCCCTTTHHHHHHHHHHTTCHH------HHHHHH
T ss_pred HHHHhCHHHHHHHcCCC--CCeEEeCCCC--HHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHhCcHH------HHHHHH
Confidence 57889999999998643 3468888887 8999999999999999999999999999999999985 999999
Q ss_pred HHhhhcc
Q 039707 82 IFFEQEV 88 (536)
Q Consensus 82 ~FL~~~v 88 (536)
.||.+..
T Consensus 113 ~~l~~~l 119 (135)
T 2yy9_A 113 SFQPQTS 119 (135)
T ss_dssp HCCC---
T ss_pred HHHHHhc
Confidence 9998744
No 12
>3ga1_A Nucleus accumbens-associated protein 1; BTB/POZ domain, phosphoprotein, repressor, transcri transcription regulation; 2.10A {Homo sapiens}
Probab=98.30 E-value=2.4e-07 Score=81.55 Aligned_cols=76 Identities=17% Similarity=0.342 Sum_probs=60.4
Q ss_pred ccccchhHHHHHHhhCCCCCceeecc-CCCCChHHHHHHHHHhcCCCcccCCCchHHHHhhHhhhccccccCCCchHHHH
Q 039707 2 LLASKSAKVAAILDENPNQDLSYFLR-DISPDTETFELVLRFCHGFEPQISTENVIPIIGLADYLEMTEAHCRNNLLRRA 80 (536)
Q Consensus 2 ~L~srSg~l~rli~~~~~~~~~i~l~-dfPGGaeaFEl~akFCYG~~i~lt~~NVa~LrCAAeyLeMtE~~~~~NLi~kt 80 (536)
+|.++|.+++.++... ....|.|+ |++ +++|+.+.+|+|.+++++++.||..|..||++|+|.+ |....
T Consensus 51 vLaa~S~~F~~~f~~~--~~~~i~l~~~~~--~~~f~~ll~~iYtg~~~i~~~~~~~ll~~A~~~~i~~------l~~~C 120 (129)
T 3ga1_A 51 VLAASSSYFRDLFNNS--RSAVVELPAAVQ--PQSFQQILSFCYTGRLSMNVGDQDLLMYTAGFLQIQE------IMEKG 120 (129)
T ss_dssp HHHHHBHHHHHHHHHC--CCSEEECCTTCC--HHHHHHHHHHHHHSEEECCTTTHHHHHHHHHHTTBTT------SSCC-
T ss_pred HHHHcCHHHHHHHcCC--CCCEEEECCCCC--HHHHHHHHHHHhCCccccCHHHHHHHHHHHHHhCCHH------HHHHH
Confidence 5788999999999876 33578875 665 8999999999999999999999999999999999986 88888
Q ss_pred HHHhhhc
Q 039707 81 LIFFEQE 87 (536)
Q Consensus 81 E~FL~~~ 87 (536)
+.||.++
T Consensus 121 ~~~L~~~ 127 (129)
T 3ga1_A 121 TEFFLKV 127 (129)
T ss_dssp -------
T ss_pred HHHHHHh
Confidence 8888763
No 13
>2q81_A MIZ-1 protein; BTB/POZ domain, transcription; HET: PG4; 2.10A {Homo sapiens} PDB: 3m52_A
Probab=98.30 E-value=5.1e-07 Score=78.46 Aligned_cols=73 Identities=19% Similarity=0.240 Sum_probs=64.4
Q ss_pred ccccchhHHHHHHhhCCCCCceeeccCCCCChHHHHHHHHHhcCCCcccCCCchHHHHhhHhhhccccccCCCchHHHHH
Q 039707 2 LLASKSAKVAAILDENPNQDLSYFLRDISPDTETFELVLRFCHGFEPQISTENVIPIIGLADYLEMTEAHCRNNLLRRAL 81 (536)
Q Consensus 2 ~L~srSg~l~rli~~~~~~~~~i~l~dfPGGaeaFEl~akFCYG~~i~lt~~NVa~LrCAAeyLeMtE~~~~~NLi~ktE 81 (536)
+|+++|.+++.++.... ..|.|+++ .+++|+.+.+|+|.+++++++.||..|..||++|+|.+ |....+
T Consensus 45 vLaa~S~yF~~~f~~~~---~~i~l~~~--~~~~f~~ll~~~Ytg~~~i~~~~~~~ll~~A~~l~i~~------L~~~C~ 113 (119)
T 2q81_A 45 VLAACSEYFKMLFVDQK---DVVHLDIS--NAAGLGQVLEFMYTAKLSLSPENVDDVLAVATFLQMQD------IITACH 113 (119)
T ss_dssp HHHHHCHHHHHHHHHCC---SGGGGGGC--CHHHHHHHHHHHHHSCCCCCTTTHHHHHHHHHHTTCHH------HHHHHH
T ss_pred HHHHcCHHHHHHHcCCC---CEEEeCCC--CHHHHHHHHHHHcCCCCccCHHHHHHHHHHHHHhCCHH------HHHHHH
Confidence 57899999999998743 35666665 48999999999999999999999999999999999986 999999
Q ss_pred HHhh
Q 039707 82 IFFE 85 (536)
Q Consensus 82 ~FL~ 85 (536)
.||.
T Consensus 114 ~~l~ 117 (119)
T 2q81_A 114 ALKS 117 (119)
T ss_dssp HHHT
T ss_pred HHHh
Confidence 9985
No 14
>3ohu_A Transcription regulator protein BACH2; BTB/POZ domain; 2.10A {Homo sapiens} SCOP: d.42.1.0 PDB: 3ohv_A
Probab=98.29 E-value=2.2e-07 Score=80.99 Aligned_cols=66 Identities=26% Similarity=0.326 Sum_probs=58.2
Q ss_pred ccccchhHHHHHHhhCCCCCceeeccC-CCCChHHHHHHHHHhcCCCcccCCCchHHHHhhHhhhcccc
Q 039707 2 LLASKSAKVAAILDENPNQDLSYFLRD-ISPDTETFELVLRFCHGFEPQISTENVIPIIGLADYLEMTE 69 (536)
Q Consensus 2 ~L~srSg~l~rli~~~~~~~~~i~l~d-fPGGaeaFEl~akFCYG~~i~lt~~NVa~LrCAAeyLeMtE 69 (536)
+|+++|.+++.++.....+...|.|+| + .+++|+.+.+|+|.+++.+++.||..|..||++|+|.+
T Consensus 50 vLaa~S~yF~~~f~~~~~e~~~i~l~~~~--~~~~f~~~l~~iYtg~~~~~~~~v~~ll~~A~~l~i~~ 116 (125)
T 3ohu_A 50 VLAACSEYFWQALVGQTKNDLVVSLPEEV--TARGFGPLLQFAYTAKLLLSRENIREVIRCAEFLRMHN 116 (125)
T ss_dssp HHHHHBHHHHHHHTTCCCSSCEEECCTTC--CHHHHHHHHHHHTTSEEEECTTTHHHHHHHHHHHTBSS
T ss_pred HHHHcCHHHHHHhcCCCCCCcEEEeCCCC--CHHHHHHHHHhHcCCceEECHHHHHHHHHHHHHhCCHH
Confidence 578899999999987654455777766 5 48999999999999999999999999999999999985
No 15
>1r29_A B-cell lymphoma 6 protein; BTB domain, transcriptional repression, transcription; 1.30A {Homo sapiens} SCOP: d.42.1.1 PDB: 1r28_A 1r2b_A 3bim_A 3lbz_A* 3e4u_A
Probab=98.27 E-value=1.1e-06 Score=76.83 Aligned_cols=77 Identities=19% Similarity=0.314 Sum_probs=67.2
Q ss_pred ccccchhHHHHHHhhCCC-CCceeec-cCCCCChHHHHHHHHHhcCCCcccCCCchHHHHhhHhhhccccccCCCchHHH
Q 039707 2 LLASKSAKVAAILDENPN-QDLSYFL-RDISPDTETFELVLRFCHGFEPQISTENVIPIIGLADYLEMTEAHCRNNLLRR 79 (536)
Q Consensus 2 ~L~srSg~l~rli~~~~~-~~~~i~l-~dfPGGaeaFEl~akFCYG~~i~lt~~NVa~LrCAAeyLeMtE~~~~~NLi~k 79 (536)
+|+++|.++++++..... ....|.| +|+ .+++|+.+.+|+|..++.+++.||..|..||++++|.+ |...
T Consensus 47 iLaa~S~~F~~~f~~~~~e~~~~i~l~~~~--~~~~f~~ll~~~Ytg~~~~~~~~~~~ll~~A~~~~i~~------L~~~ 118 (127)
T 1r29_A 47 VLMACSGLFYSIFTDQLKRNLSVINLDPEI--NPEGFNILLDFMYTSRLNLREGNIMAVMATAMYLQMEH------VVDT 118 (127)
T ss_dssp HHHHHCHHHHHHHTSTTTTTCSEEECCTTS--CHHHHHHHHHHHHHSCCCCCTTTHHHHHHHHHHTTCHH------HHHH
T ss_pred HHHHhCHHHHHHhcCCccCCCCEEEeCCCC--CHHHHHHHHHHHcCCCcCcCHHHHHHHHHHHHHhCCHH------HHHH
Confidence 578999999999986432 3457888 666 48999999999999999999999999999999999986 9999
Q ss_pred HHHHhhh
Q 039707 80 ALIFFEQ 86 (536)
Q Consensus 80 tE~FL~~ 86 (536)
.+.||.+
T Consensus 119 c~~~l~~ 125 (127)
T 1r29_A 119 CRKFIKA 125 (127)
T ss_dssp HHHHHHT
T ss_pred HHHHHHh
Confidence 9999975
No 16
>4eoz_A Speckle-type POZ protein; E3 ubiquitin ligase, nucleus, protein binding; 2.40A {Homo sapiens}
Probab=98.23 E-value=4.6e-07 Score=80.06 Aligned_cols=95 Identities=15% Similarity=0.122 Sum_probs=65.1
Q ss_pred ccccchhHHHHHHhhCCC--CCceeeccCCCCChHHHHHHHHHhcCCCcccCCCchHHHHhhHhhhccccccCCCchHHH
Q 039707 2 LLASKSAKVAAILDENPN--QDLSYFLRDISPDTETFELVLRFCHGFEPQISTENVIPIIGLADYLEMTEAHCRNNLLRR 79 (536)
Q Consensus 2 ~L~srSg~l~rli~~~~~--~~~~i~l~dfPGGaeaFEl~akFCYG~~i~lt~~NVa~LrCAAeyLeMtE~~~~~NLi~k 79 (536)
+|.++|.+|+.++..... ....|.|+|++ +++|+.+.+|+|+.++.+++.|+..|..+|++++|.+ |...
T Consensus 43 iL~~~S~~F~~~f~~~~~e~~~~~i~l~~~~--~~~~~~~l~~~Y~~~~~~~~~~~~~ll~~A~~~~~~~------l~~~ 114 (145)
T 4eoz_A 43 ILAARSPVFSAMFEHEMEESKKNRVEINDVE--PEVFKEMMCFIYTGKAPNLDKMADDLLAAADKYALER------LKVM 114 (145)
T ss_dssp HHHHHCHHHHHHHHSSSHHHHHTEEEECSSC--HHHHHHHHHHHHHSCCTTGGGTHHHHHHHHHHTTCHH------HHHH
T ss_pred HHHHcCHHHHHHHcCCCcCCCCceEEecCCC--HHHHHHHHHhhccCccCCcHHHHHHHHHHHHHhCHHH------HHHH
Confidence 578999999999985422 22478888874 8999999999999999999999999999999999986 9999
Q ss_pred HHHHhhhccCCChHHHHHHHHHhhhhhhhhhhhc
Q 039707 80 ALIFFEQEVLPSWNETIKALRVADDFLQQAVQLG 113 (536)
Q Consensus 80 tE~FL~~~vl~sW~dsi~vLksce~llp~AE~l~ 113 (536)
++.||.+.+- ..+|-.++.+|+..+
T Consensus 115 c~~~l~~~l~---------~~n~~~~l~~A~~~~ 139 (145)
T 4eoz_A 115 CEDALCSNLS---------VENAAEILILADLHS 139 (145)
T ss_dssp HHCC------------------------------
T ss_pred HHHHHHHhCC---------HHHHHHHHHHHHHhC
Confidence 9999987441 235555666666544
No 17
>2ihc_A Transcription regulator protein BACH1; BRIC-A-BRAC domain,transcription factor, protein-PROT interaction; 2.44A {Homo sapiens}
Probab=98.16 E-value=5.4e-07 Score=78.84 Aligned_cols=76 Identities=18% Similarity=0.310 Sum_probs=62.4
Q ss_pred ccccchhHHHHHHhhCCCCCceeecc-CCCCChHHHHHHHHHhcCCCcccCCCchHHHHhhHhhhccccccCCCchHHHH
Q 039707 2 LLASKSAKVAAILDENPNQDLSYFLR-DISPDTETFELVLRFCHGFEPQISTENVIPIIGLADYLEMTEAHCRNNLLRRA 80 (536)
Q Consensus 2 ~L~srSg~l~rli~~~~~~~~~i~l~-dfPGGaeaFEl~akFCYG~~i~lt~~NVa~LrCAAeyLeMtE~~~~~NLi~kt 80 (536)
+|+++|.+++.++.....+...|.++ ++ .+++|+.+.+|+|++++++++.||..|..||++++|.+ |....
T Consensus 47 vLaa~S~yF~~mf~~~~~e~~~i~l~~~v--~~~~f~~lL~~iYtg~~~i~~~~v~~ll~~A~~~~~~~------L~~~C 118 (124)
T 2ihc_A 47 VLAACSSYFHSRIVGQADGELNITLPEEV--TVKGFEPLIQFAYTAKLILSKENVDEVCKCVEFLSVHN------IEESC 118 (124)
T ss_dssp HHHHHBHHHHHHHTTC---CEEEECCTTS--CHHHHHHHHHHHHHSEEEEETTTHHHHHHHHHHHTBSS------CCGGG
T ss_pred HHHHcCHHHHHHHcCCCCCCceEeecCCc--CHHHHHHHHHHhcCCCcccCHHHHHHHHHHHHHHCCHH------HHHHH
Confidence 57899999999998664444567774 55 48999999999999999999999999999999999985 77777
Q ss_pred HHHhh
Q 039707 81 LIFFE 85 (536)
Q Consensus 81 E~FL~ 85 (536)
+.||.
T Consensus 119 ~~~l~ 123 (124)
T 2ihc_A 119 FQFLK 123 (124)
T ss_dssp GGTC-
T ss_pred HHHHh
Confidence 77764
No 18
>3m5b_A Zinc finger and BTB domain-containing protein 32; POZ domain, BTB/POZ domain, ZBTB32, zinc finger domain-containing protein 32; 2.00A {Homo sapiens} SCOP: d.42.1.0
Probab=97.90 E-value=4.2e-06 Score=73.38 Aligned_cols=70 Identities=20% Similarity=0.191 Sum_probs=58.7
Q ss_pred ccccchhHHHHHHhhCCCCCceeeccCCCCChHHHHHHHHHhcCCCcccCCCchHHHHhhHhhhccccccCCCchHHHHH
Q 039707 2 LLASKSAKVAAILDENPNQDLSYFLRDISPDTETFELVLRFCHGFEPQISTENVIPIIGLADYLEMTEAHCRNNLLRRAL 81 (536)
Q Consensus 2 ~L~srSg~l~rli~~~~~~~~~i~l~dfPGGaeaFEl~akFCYG~~i~lt~~NVa~LrCAAeyLeMtE~~~~~NLi~ktE 81 (536)
+|+++|.|++. ....|.|+|++ +++|+.+.+|+|.++++|+..||..|..||++|+|.+ |....+
T Consensus 48 vLaa~S~yF~~-------~~~~i~l~~v~--~~~f~~ll~fiYtg~~~i~~~~v~~ll~aA~~l~i~~------l~~~C~ 112 (119)
T 3m5b_A 48 VLAGVSQQLGR-------RGQWALGEGIS--PSTFAQLLNFVYGESVELQPGELRPLQEAARALGVQS------LEEACW 112 (119)
T ss_dssp HHHTTCGGGCC-------CEEEECCSSCC--HHHHHHHHHHHTTCCEEECGGGHHHHHHHHHHTTCHH------HHHHHH
T ss_pred HHHHcCHHHhc-------CCCEEEeCCCC--HHHHHHHHHHHcCCCcCcCHHHHHHHHHHHHHhCCHH------HHHHHH
Confidence 46777777752 23468888876 8999999999999999999999999999999999985 999998
Q ss_pred HHhhh
Q 039707 82 IFFEQ 86 (536)
Q Consensus 82 ~FL~~ 86 (536)
.++.+
T Consensus 113 ~~~~~ 117 (119)
T 3m5b_A 113 RARGD 117 (119)
T ss_dssp HHC--
T ss_pred HHHhh
Confidence 88765
No 19
>3fkc_A Transcriptional regulator kaiso; zinc finger and BTB domain containing 33, kaiso transcriptio ZNF-kaiso, ZNF348,wugsc:H_DJ525N14.1; 1.70A {Homo sapiens} PDB: 3m4t_A 3m8v_A
Probab=97.86 E-value=8.2e-06 Score=70.80 Aligned_cols=63 Identities=14% Similarity=0.160 Sum_probs=56.5
Q ss_pred ccccchhHHHHHHhhCCCCCceeeccCCCCChHHHHHHHHHhcCCCc-ccCCCchHHHHhhHhhhcccc
Q 039707 2 LLASKSAKVAAILDENPNQDLSYFLRDISPDTETFELVLRFCHGFEP-QISTENVIPIIGLADYLEMTE 69 (536)
Q Consensus 2 ~L~srSg~l~rli~~~~~~~~~i~l~dfPGGaeaFEl~akFCYG~~i-~lt~~NVa~LrCAAeyLeMtE 69 (536)
+|.++|.+++.++... ...|.|+|++ +++|+.+.+|+|++++ ++++.||..|..||++|+|..
T Consensus 49 vLaa~S~~F~~~f~~~---~~~i~l~~~~--~~~f~~~l~~~Ytg~~~~~~~~~~~~ll~~A~~l~i~~ 112 (116)
T 3fkc_A 49 ILSASSTYFHQLFSVA---GQVVELSFIR--AEIFAEILNYIYSSKIVRVRSDLLDELIKSGQLLGVKF 112 (116)
T ss_dssp HHHHHCHHHHHHTTSC---CSEEEECSSC--HHHHHHHHHHHTTSCCCSCCHHHHHHHHHHHHHHTCHH
T ss_pred HHHHcCHHHHHHHcCC---CCEEEeCCCC--HHHHHHHHHhhcCCCcCCCCHHHHHHHHHHHHHhCccc
Confidence 5789999999999865 2478888876 8999999999999999 799999999999999999974
No 20
>3hqi_A Speckle-type POZ protein; SPOP, ubiquitin, puckered, nucleus, UBL conjugation pathway, protein binding, ligase; 2.62A {Homo sapiens} PDB: 3hu6_A
Probab=97.86 E-value=1.6e-05 Score=79.39 Aligned_cols=107 Identities=14% Similarity=0.086 Sum_probs=85.7
Q ss_pred ccccchhHHHHHHhhCCC--CCceeeccCCCCChHHHHHHHHHhcCCCcccCCCchHHHHhhHhhhccccccCCCchHHH
Q 039707 2 LLASKSAKVAAILDENPN--QDLSYFLRDISPDTETFELVLRFCHGFEPQISTENVIPIIGLADYLEMTEAHCRNNLLRR 79 (536)
Q Consensus 2 ~L~srSg~l~rli~~~~~--~~~~i~l~dfPGGaeaFEl~akFCYG~~i~lt~~NVa~LrCAAeyLeMtE~~~~~NLi~k 79 (536)
+|+++|.+++.++...-. ....|.|+|++ +++|+...+|+|+..+.++..|+..|..||++++|.. |...
T Consensus 192 vLaa~S~~F~~~f~~~~~e~~~~~i~l~~~~--~~~f~~~L~~iYt~~~~~~~~~~~~ll~~A~~~~~~~------l~~~ 263 (312)
T 3hqi_A 192 ILAARSPVFSAMFEHEMEESKKNRVEINDVE--PEVFKEMMCFIYTGKAPNLDKMADDLLAAADKYALER------LKVM 263 (312)
T ss_dssp HHHHHCHHHHHHTTC-----CCSEEEECSSC--HHHHHHHHHHHHHSCCTTHHHHHHHHHHHHHHTTCHH------HHHH
T ss_pred HHHHcCHHHHHHhccCccccCCceEEecCCC--HHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHhCHHH------HHHH
Confidence 578999999999975321 34589999875 8999999999999999999999999999999999984 9999
Q ss_pred HHHHhhhccCCChHHHHHHHHHhhhhhhhhhhh---chHHHHHHHHHHH
Q 039707 80 ALIFFEQEVLPSWNETIKALRVADDFLQQAVQL---GLVDACFRSLIEK 125 (536)
Q Consensus 80 tE~FL~~~vl~sW~dsi~vLksce~llp~AE~l---~Iv~RCidsla~k 125 (536)
.|.||.+.+-. .+|-.++.+|+.. .+...|++-|+..
T Consensus 264 c~~~l~~~~~~---------~n~~~~l~~A~~~~~~~L~~~~~~~i~~~ 303 (312)
T 3hqi_A 264 CEDALCSNLSV---------ENAAEILILADLHSADQLKTQAVDFINYH 303 (312)
T ss_dssp HHHHHHTTCCT---------TTHHHHHHHHHHTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHccCCH---------HHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 99999875422 3455566677665 4677888888764
No 21
>4ajy_C Transcription elongation factor B polypeptide 1; E3 ubiquitin ligase, transcription factor, hypoxic signaling transcription; 1.73A {Homo sapiens} PDB: 2izv_C 3dcg_B 3zrc_B* 3zrf_B 3ztc_B* 3ztd_B* 3zun_B* 2c9w_C 4awj_B* 4b95_B* 4b9k_B* 2fnj_C 1lqb_B 1lm8_C 2jz3_C 2xai_B 4b9k_E*
Probab=95.81 E-value=0.014 Score=49.39 Aligned_cols=61 Identities=20% Similarity=0.278 Sum_probs=48.6
Q ss_pred ccchhHHHHHHhhCCC----CCceeeccCCCCChHHHHHHHHHhc-----C---CCcc---cCCCchHHHHhhHhhhc
Q 039707 4 ASKSAKVAAILDENPN----QDLSYFLRDISPDTETFELVLRFCH-----G---FEPQ---ISTENVIPIIGLADYLE 66 (536)
Q Consensus 4 ~srSg~l~rli~~~~~----~~~~i~l~dfPGGaeaFEl~akFCY-----G---~~i~---lt~~NVa~LrCAAeyLe 66 (536)
+..|++|+.++..... ....|.|++++ +.+++.+..||| . ..+. |++.|+--|-.||.||+
T Consensus 21 A~~S~~ik~m~~~~~~~~E~~~~~I~l~~V~--~~iL~kViey~~~h~~~~~~~~~i~~~~i~~~~l~eLl~AAnyL~ 96 (97)
T 4ajy_C 21 ALTSGTIKAMLSGPGQFAENETNEVNFREIP--SHVLSKVCMYFTYKVRYTNSSTEIPEFPIAPEIALELLMAANFLD 96 (97)
T ss_dssp HTTSHHHHHHHCCC--------CEEECTTSC--HHHHHHHHHHHHHHHHHTTCCSCCCCCCCCGGGHHHHHHHHHHHT
T ss_pred HHHhHHHHHHHHhCCCccccCCCceECCCCC--HHHHHHHHHHHHHhcccCCCcCCCCcCcCCHHHHHHHHHHHhhhC
Confidence 5789999999986322 23478777765 789999999999 4 4565 99999999999999997
No 22
>2ast_A S-phase kinase-associated protein 1A; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} PDB: 2ass_A* 2e31_B 2e32_B 3l2o_A 1p22_B* 2ovr_A* 2ovp_A 1fqv_B* 2ovq_A*
Probab=95.76 E-value=0.0049 Score=56.58 Aligned_cols=78 Identities=17% Similarity=0.319 Sum_probs=61.9
Q ss_pred ccchhHHHHHHhhCC----CCCceeeccCCCCChHHHHHHHHHhcCCC--------------------------cccCCC
Q 039707 4 ASKSAKVAAILDENP----NQDLSYFLRDISPDTETFELVLRFCHGFE--------------------------PQISTE 53 (536)
Q Consensus 4 ~srSg~l~rli~~~~----~~~~~i~l~dfPGGaeaFEl~akFCYG~~--------------------------i~lt~~ 53 (536)
++.|++|+.|+.... ...-.|.|++++ +.+++.+..|||-.+ +.++..
T Consensus 20 A~~S~~i~~m~~~~~~~~e~~~~~Ipl~~V~--~~iL~kViey~~~h~~~~~~~~~~~~~~~~~~~i~~wD~~F~~id~~ 97 (159)
T 2ast_A 20 AKQSVTIKTMLEDLGMDDEGDDDPVPLPNVN--AAILKKVIQWCTHHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQG 97 (159)
T ss_dssp HHTCHHHHHHTTSSCSS------CEECTTSC--HHHHHHHHHHHHHTTTCCC-----------CCCCCHHHHHHTCSCHH
T ss_pred HHHhHHHHHHHHhcCCcccccCCCcCCCCcc--HHHHHHHHHHHHHcCcCCCCcccccccccchhhhhHHHHHHHcCCHH
Confidence 578999999998631 122468888775 579999999999433 789999
Q ss_pred chHHHHhhHhhhccccccCCCchHHHHHHHhhhccC
Q 039707 54 NVIPIIGLADYLEMTEAHCRNNLLRRALIFFEQEVL 89 (536)
Q Consensus 54 NVa~LrCAAeyLeMtE~~~~~NLi~ktE~FL~~~vl 89 (536)
|+--|--||.||+|.. |+.-+-.|+...+-
T Consensus 98 ~l~eLl~AAnyL~I~~------Lld~~c~~va~~i~ 127 (159)
T 2ast_A 98 TLFELILAANYLDIKG------LLDVTCKTVANMIK 127 (159)
T ss_dssp HHHHHHHHHHHHTCHH------HHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHhHHH------HHHHHHHHHHHHHc
Confidence 9999999999999985 99999988877543
No 23
>1fs1_B SKP1, cyclin A/CDK2-associated P45; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.157.1.1 d.42.1.1 PDB: 1fs2_B 1ldk_D
Probab=92.99 E-value=0.1 Score=47.05 Aligned_cols=76 Identities=16% Similarity=0.315 Sum_probs=61.8
Q ss_pred cccchhHHHHHHhhCCCCCceeeccCCCCChHHHHHHHHHhcCCC--------------------------cccCCCchH
Q 039707 3 LASKSAKVAAILDENPNQDLSYFLRDISPDTETFELVLRFCHGFE--------------------------PQISTENVI 56 (536)
Q Consensus 3 L~srSg~l~rli~~~~~~~~~i~l~dfPGGaeaFEl~akFCYG~~--------------------------i~lt~~NVa 56 (536)
.+..|++|+.++.... .-.|.|++++ +.+++.+..|||--+ +.++..++-
T Consensus 20 vA~~S~~ik~ml~~~~--~~~Ipl~~V~--~~iL~kVieyc~~h~~~~~~~~~~~~~~~~~~~i~~wD~~F~~vd~~~l~ 95 (141)
T 1fs1_B 20 IAKQSVTIKTMLEDLG--MDPVPLPNVN--AAILKKVIQWCTHHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTLF 95 (141)
T ss_dssp GGGTCHHHHHHHHHTC--CSSEECTTCC--HHHHHHHHHHHHHHTTCC-----------------HHHHHHTCSCHHHHH
T ss_pred HHHHhHHHHHHHHhcC--CCceecCCcC--HHHHHHHHHHHHHhccCCCccccccccccchhhhhHHHHHHHhCCHHHHH
Confidence 3678999999998743 2368888876 579999999999322 678999999
Q ss_pred HHHhhHhhhccccccCCCchHHHHHHHhhhcc
Q 039707 57 PIIGLADYLEMTEAHCRNNLLRRALIFFEQEV 88 (536)
Q Consensus 57 ~LrCAAeyLeMtE~~~~~NLi~ktE~FL~~~v 88 (536)
-|--||.||++. .|+.-+-.|+...+
T Consensus 96 eLi~AAnyL~I~------~Lldl~c~~vA~~i 121 (141)
T 1fs1_B 96 ELILAANYLDIK------GLLDVTCKTVANMI 121 (141)
T ss_dssp HHHHHHHHHTCH------HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhh------HHHHHHHHHHHHHH
Confidence 999999999998 48888888887644
No 24
>2p1m_A SKP1-like protein 1A; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_A* 2p1o_A* 2p1p_A* 2p1q_A* 3c6n_A* 3c6o_A* 3c6p_A* 3ogk_A* 3ogl_A* 3ogm_A*
Probab=92.56 E-value=0.029 Score=51.67 Aligned_cols=76 Identities=18% Similarity=0.329 Sum_probs=42.3
Q ss_pred ccchhHHHHHHhhCCCCCceeeccCCCCChHHHHHHHHHhcCCC---------------------------cccCCCchH
Q 039707 4 ASKSAKVAAILDENPNQDLSYFLRDISPDTETFELVLRFCHGFE---------------------------PQISTENVI 56 (536)
Q Consensus 4 ~srSg~l~rli~~~~~~~~~i~l~dfPGGaeaFEl~akFCYG~~---------------------------i~lt~~NVa 56 (536)
+..|++|+.++..... .-.|.|++++| .+++.+..|||--+ +.++..++-
T Consensus 23 A~~S~~ik~ml~~~~~-~~~Ipl~~V~~--~iL~kVieyc~~h~~~~~~~~~~~~~~~~~~~~i~~wD~~Fl~vd~~~l~ 99 (160)
T 2p1m_A 23 ALESQTIAHMVEDDCV-DNGVPLPNVTS--KILAKVIEYCKRHVEAAASKAEAVEGAATSDDDLKAWDADFMKIDQATLF 99 (160)
T ss_dssp HHTCTTTC-------------CCTTSCH--HHHHHHHHC-----------------------------------------
T ss_pred HHHhHHHHHHHHccCC-CCceeCCcCcH--HHHHHHHHHHHHcccCCCcccccccccccccchhhHHHHHHHcCCHHHHH
Confidence 5678999999876432 23677777765 89999999999432 478899999
Q ss_pred HHHhhHhhhccccccCCCchHHHHHHHhhhcc
Q 039707 57 PIIGLADYLEMTEAHCRNNLLRRALIFFEQEV 88 (536)
Q Consensus 57 ~LrCAAeyLeMtE~~~~~NLi~ktE~FL~~~v 88 (536)
-|--||.||+|.. |+.-+-.|+...+
T Consensus 100 eLi~AAnyL~I~~------Lldl~c~~vA~~i 125 (160)
T 2p1m_A 100 ELILAANYLNIKN------LLDLTCQTVADMI 125 (160)
T ss_dssp -CHHHHHHTTCHH------HHHHHHHHHHHTT
T ss_pred HHHHHHHHHhHHH------HHHHHHHHHHHHH
Confidence 9999999999984 9999999988755
No 25
>3vmx_A Voltage-gated hydrogen channel 1; coiled-coil, ION channel, ION transport, membrane protein; 1.45A {Mus musculus}
Probab=83.47 E-value=2.4 Score=32.12 Aligned_cols=33 Identities=15% Similarity=0.195 Sum_probs=29.0
Q ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhh
Q 039707 456 AMVIKEMKIMSNKVMELERECLVMRKELQKSCS 488 (536)
Q Consensus 456 ~~Lk~el~~M~~rv~eLEkec~~Mk~~~~k~~~ 488 (536)
..||.--+.+-+||.+||..|..+.|||+++.+
T Consensus 7 ~kLKe~n~~L~~kv~~Le~~c~~~eQEieRL~~ 39 (48)
T 3vmx_A 7 LRLKQINIQLATKIQHLEFSCSEKEQEIERLNK 39 (48)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHH
Confidence 457777888999999999999999999999844
No 26
>3v7d_A Suppressor of kinetochore protein 1; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_A* 3mks_A*
Probab=79.35 E-value=2.1 Score=39.68 Aligned_cols=75 Identities=16% Similarity=0.287 Sum_probs=51.9
Q ss_pred ccchhHHHHHHhhCCC------CCceeeccCCCCChHHHHHHHHHhcC-CC------------------------cccCC
Q 039707 4 ASKSAKVAAILDENPN------QDLSYFLRDISPDTETFELVLRFCHG-FE------------------------PQIST 52 (536)
Q Consensus 4 ~srSg~l~rli~~~~~------~~~~i~l~dfPGGaeaFEl~akFCYG-~~------------------------i~lt~ 52 (536)
+..|+.|+.++..... ....|-|++++ +.+++.|..|||- .. +.+.+
T Consensus 26 A~~S~tIk~ml~~~~~~~~~~~~~~~IplpnV~--s~iL~kVieyc~~h~~~~~~~~~~~~~~~~~~i~~wD~~Fl~vd~ 103 (169)
T 3v7d_A 26 AERSLLLKNYLNDMGDDDDEDDDEIVMPVPNVR--SSVLQKVIEWAEHHRDSNFPDEDDDDSRKSAPVDSWDREFLKVDQ 103 (169)
T ss_dssp HTTSHHHHHHHHC-----------CEEECTTCC--HHHHHHHHHHHHHTTTCCCCC--------CCCCCHHHHHHTCSCH
T ss_pred HHHhHHHHHHHHhcCcccccccCCCceeeCCCC--HHHHHHHHHHHHHcccCCCcccccccccccccccHHHHHHHcCCH
Confidence 5679999999986432 12468888876 5899999999992 11 34556
Q ss_pred CchHHHHhhHhhhccccccCCCchHHHHHHHhhh
Q 039707 53 ENVIPIIGLADYLEMTEAHCRNNLLRRALIFFEQ 86 (536)
Q Consensus 53 ~NVa~LrCAAeyLeMtE~~~~~NLi~ktE~FL~~ 86 (536)
..+--|-.||.||++.. |+.-|=.++..
T Consensus 104 ~~LfeLi~AAnyLdIk~------Lldl~c~~vA~ 131 (169)
T 3v7d_A 104 EMLYEIILAANYLNIKP------LLDAGCKVVAE 131 (169)
T ss_dssp HHHHHHHHHHHHTTCHH------HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCcHH------HHHHHHHHHHH
Confidence 66777888999999873 66655555443
No 27
>2yy0_A C-MYC-binding protein; conserved hypothetical protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.40A {Homo sapiens}
Probab=79.24 E-value=2.8 Score=32.13 Aligned_cols=32 Identities=19% Similarity=0.237 Sum_probs=28.7
Q ss_pred hH-HHHHHHHHhHHHHHHHHHHHHHHHHHHHhh
Q 039707 454 DE-AMVIKEMKIMSNKVMELERECLVMRKELQK 485 (536)
Q Consensus 454 ~e-~~Lk~el~~M~~rv~eLEkec~~Mk~~~~k 485 (536)
-| +.||.|++.+|.|+.+|.+++..++..+++
T Consensus 19 ~d~eaLk~E~~eLk~k~~~L~~~~~el~~~l~~ 51 (53)
T 2yy0_A 19 PEIELLRLELAEMKEKYEAIVEENKKLKAKLAQ 51 (53)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 45 889999999999999999999999988765
No 28
>2fnj_C Transcription elongation factor B polypeptide 1; beta-sandwich, lectin-like, SPRY, protein transport/signaling protein complex; 1.80A {Mus musculus} SCOP: d.42.1.1 PDB: 1lqb_B 1lm8_C 2jz3_C 2xai_B 2c9w_C 2izv_C 3dcg_B 3zrc_B* 3zrf_B
Probab=75.64 E-value=1.7 Score=36.58 Aligned_cols=62 Identities=19% Similarity=0.259 Sum_probs=46.2
Q ss_pred ccchhHHHHHHhhCCC----CCceeeccCCCCChHHHHHHHHHhcC-C----------CcccCCCchHHHHhhHhhhcc
Q 039707 4 ASKSAKVAAILDENPN----QDLSYFLRDISPDTETFELVLRFCHG-F----------EPQISTENVIPIIGLADYLEM 67 (536)
Q Consensus 4 ~srSg~l~rli~~~~~----~~~~i~l~dfPGGaeaFEl~akFCYG-~----------~i~lt~~NVa~LrCAAeyLeM 67 (536)
+..|+.|+.++.+... ..-.|-|++++ +.+++.+..|||- . .+.+.+..+--|--||.||++
T Consensus 20 A~~S~~ik~ml~~~~~~~e~~~~~Ipl~~V~--~~iL~kVieyc~~h~~~~~~~~~i~~w~vd~~~l~eLi~AAnyLdI 96 (96)
T 2fnj_C 20 ALTSGTIKAMLSGPGQFAENETNEVNFREIP--SHVLSKVCMYFTYKVRYTNSSTEIPEFPIAPEIALELLMAANFLDC 96 (96)
T ss_dssp HTTSHHHHHHHHCC--------CEEECSSCC--HHHHHHHHHHHHHHHHHHSCCSCCCCCCCCTTTHHHHHHHHHHHTC
T ss_pred HHHhHHHHHHHHccCCcccccCCceeCCCCC--HHHHHHHHHHHHHccccCCCcccCCCcccCHHHHHHHHHHHHHhCc
Confidence 5689999999986422 12367777766 4799999999982 1 146788888899999999974
No 29
>3a2a_A Voltage-gated hydrogen channel 1; voltage-gated proton channel, alternative splicing, coiled C transport, ionic channel, membrane, transmembrane; 2.00A {Homo sapiens}
Probab=75.15 E-value=4.8 Score=31.28 Aligned_cols=33 Identities=15% Similarity=0.198 Sum_probs=26.8
Q ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhh
Q 039707 456 AMVIKEMKIMSNKVMELERECLVMRKELQKSCS 488 (536)
Q Consensus 456 ~~Lk~el~~M~~rv~eLEkec~~Mk~~~~k~~~ 488 (536)
..||.-=.++-.+|.+||-.|+.|.|||+++..
T Consensus 14 ~kLKq~n~~L~~kv~~Le~~c~e~eQEieRL~~ 46 (58)
T 3a2a_A 14 LRLKQMNVQLAAKIQHLEFSCSEKEQEIERLNK 46 (58)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345544566778999999999999999999954
No 30
>1hv2_A Elongin C, ELC1; protein-peptide complex, signaling protein; NMR {Saccharomyces cerevisiae} SCOP: d.42.1.1
Probab=62.08 E-value=3.5 Score=34.86 Aligned_cols=62 Identities=21% Similarity=0.271 Sum_probs=45.4
Q ss_pred ccchhHHHHHHhhCCC-CCceeeccCCCCChHHHHHHHHHhcC-C-------------CcccCCCchHHHHhhHhhhcc
Q 039707 4 ASKSAKVAAILDENPN-QDLSYFLRDISPDTETFELVLRFCHG-F-------------EPQISTENVIPIIGLADYLEM 67 (536)
Q Consensus 4 ~srSg~l~rli~~~~~-~~~~i~l~dfPGGaeaFEl~akFCYG-~-------------~i~lt~~NVa~LrCAAeyLeM 67 (536)
+..|+.|+.++...-+ ..-.|-|++++| .+++.+..|||- . .+.+.+..+--|--||.||++
T Consensus 23 A~~S~~ik~ml~~~~e~~~~~Iplp~V~~--~iL~kVieyc~~h~~~~~~~~~~~~i~~w~vd~~~lfeLi~AAnyLdI 99 (99)
T 1hv2_A 23 AMISPTLKAMIEGPFRESKGRIELKQFDS--HILEKAVEYLNYNLKYSGVSEDDDEIPEFEIPTEMSLELLLAADYLSI 99 (99)
T ss_dssp HTTCHHHHHHHHSSTTTCTTEEEETTSCH--HHHHHHHHHHHHHHHHHHHCSSCSSCCCCCCCHHHHHHHHHHHHHHCC
T ss_pred HHHhHHHHHHHhcccccCCCceecCCcCH--HHHHHHHHHHHHhcccCCCccccccCCCccCCHHHHHHHHHHHHHhCc
Confidence 5689999999986211 224788887764 699999999992 1 135666677778889999874
No 31
>3vp9_A General transcriptional corepressor TUP1; four helix bundle; 1.80A {Saccharomyces cerevisiae} PDB: 3vp8_A
Probab=59.03 E-value=9.7 Score=32.46 Aligned_cols=25 Identities=28% Similarity=0.311 Sum_probs=22.5
Q ss_pred HHHHhHHHHHHHHHHHHHHHHHHHh
Q 039707 460 KEMKIMSNKVMELERECLVMRKELQ 484 (536)
Q Consensus 460 ~el~~M~~rv~eLEkec~~Mk~~~~ 484 (536)
.||+.||..|.+||..+..||+..+
T Consensus 50 ~Emq~Ir~tvyeLE~~h~kmKq~YE 74 (92)
T 3vp9_A 50 AEMQQIRNTVYERELTHRKMKDAYE 74 (92)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5799999999999999999998664
No 32
>3b0b_C CENP-X, centromere protein X; histone fold, DNA binding, DNA, nucleus, DNA binding protein; 2.15A {Gallus gallus} PDB: 3vh5_D 3vh6_D
Probab=56.44 E-value=11 Score=31.34 Aligned_cols=43 Identities=23% Similarity=0.271 Sum_probs=35.0
Q ss_pred ccccchHHHHHHHHHHHcCCCCCCCchhhHHHHHHHHHHHHHH
Q 039707 295 EVQYDIECLRRILRNFCGSYSPSSQFPGYMKVAELIEKFLAEI 337 (536)
Q Consensus 295 ~tlyDVd~V~Ril~~Fl~~~~~~~~~~~l~~VakLvD~YLaEI 337 (536)
+..++.+++.||+..+.......-+..++..|++++|-|..|.
T Consensus 6 ~~~~~~~lI~ril~~~f~~~ktrI~~dAl~l~aeyl~iFV~EA 48 (81)
T 3b0b_C 6 EGGFRKETVERLLRLHFRDGRTRVNGDALLLMAELLKVFVREA 48 (81)
T ss_dssp -CCCCHHHHHHHHHHHCCSTTCEECHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHhccCcccccHHHHHHHHHHHHHHHHHH
Confidence 4569999999999998766544335789999999999999984
No 33
>1vjh_A BET V I allergen family; structural genomics, center for eukaryotic structural genomics, protein structure initiative, CESG, plant protein; 2.10A {Arabidopsis thaliana} SCOP: d.129.3.1 PDB: 2q3q_A
Probab=50.55 E-value=8 Score=33.60 Aligned_cols=31 Identities=3% Similarity=-0.098 Sum_probs=24.4
Q ss_pred hcCCCCChHHHHHHhhhhccccCccccccchhhHHHHHHHHhCCC
Q 039707 338 AADIDLKMNTFLSIVEMSAEVHTVTQRNSDGIYMAIDIYFHKHRY 382 (536)
Q Consensus 338 A~D~nLk~~KF~~LA~~~ealPd~aR~~~DgLYRAIDiYLkaHp~ 382 (536)
..|.+.+|.++.+.+ .|+++|||-||-+||.
T Consensus 92 ~~~~~~~p~~~~~~~--------------~~~~k~ie~yll~~p~ 122 (122)
T 1vjh_A 92 VHKDIDDPHSIIDES--------------VKYFKKLDEAILNFKE 122 (122)
T ss_dssp SSTTSCCSHHHHHHH--------------HHHHHHHHHHHHHC--
T ss_pred CCCCCCCHHHHHHHH--------------HHHHHHHHHHHhhCCC
Confidence 456778888887766 6889999999999983
No 34
>1vcb_B Protein (elongin C); tumor suppressor, cancer, ubiquitin, beta sandwich, transcription, transcriptional elongation; 2.70A {Homo sapiens} SCOP: d.42.1.1
Probab=49.93 E-value=4.8 Score=34.89 Aligned_cols=62 Identities=18% Similarity=0.235 Sum_probs=44.5
Q ss_pred ccchhHHHHHHhhCCC----CCceeeccCCCCChHHHHHHHHHhcC-C-----C-----cccCCCchHHHHhhHhhhcc
Q 039707 4 ASKSAKVAAILDENPN----QDLSYFLRDISPDTETFELVLRFCHG-F-----E-----PQISTENVIPIIGLADYLEM 67 (536)
Q Consensus 4 ~srSg~l~rli~~~~~----~~~~i~l~dfPGGaeaFEl~akFCYG-~-----~-----i~lt~~NVa~LrCAAeyLeM 67 (536)
+..|+.|+.++..... ..-.|-|++++| .+++.+..|||- . . +.+.+.++--|--||.||++
T Consensus 36 A~~S~tIk~ml~~~~~~~e~~~~~IplpnV~s--~iL~kVieyc~~h~~~~~~~~~i~~w~vd~~~lfeLi~AAnyLdI 112 (112)
T 1vcb_B 36 ALTSGTIKAMLSGPGQFAENETNEVNFREIPS--HVLSKVCMYFTYKVRYTNSSTEIPEFPIAPEIALELLMAANFLDC 112 (112)
T ss_dssp HHTSHHHHHHSSCC--------CEEECSSCCH--HHHHHHHHHHHHHHHHSSCSSCCCCCCCCHHHHHHHHHHHHHHTC
T ss_pred HHHhHHHHHHHHhcCCcccccCCceeCCCCCH--HHHHHHHHHHHHhhhccCCcCCCCCcccCHHHHHHHHHHHHHhCc
Confidence 4679999999975422 123677887764 699999999982 1 1 35666777888899999974
No 35
>4dra_E Centromere protein X; DNA binding complex, DNA damage repair, histone-fold, DNA BI protein; 2.41A {Homo sapiens} PDB: 4drb_J
Probab=47.05 E-value=12 Score=31.23 Aligned_cols=43 Identities=16% Similarity=0.178 Sum_probs=34.9
Q ss_pred ccccchHHHHHHHHHHHcCCCCCCCchhhHHHHHHHHHHHHHH
Q 039707 295 EVQYDIECLRRILRNFCGSYSPSSQFPGYMKVAELIEKFLAEI 337 (536)
Q Consensus 295 ~tlyDVd~V~Ril~~Fl~~~~~~~~~~~l~~VakLvD~YLaEI 337 (536)
+..+..++|.||+..+...+...-+...+..|++++|-|..|.
T Consensus 10 ~~~i~~~li~ril~~~F~~~kTkIs~dAl~l~aeyl~iFV~EA 52 (84)
T 4dra_E 10 GSGFRKELVSRLLHLHFKDDKTKVSGDALQLMVELLKVFVVEA 52 (84)
T ss_dssp -CCCCHHHHHHHHHTTCSSTTCEECHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHhcCCCccccHHHHHHHHHHHHHHHHHH
Confidence 5678999999999977765554345789999999999999884
No 36
>1deb_A APC protein, adenomatous polyposis coli protein; coiled coil, tumor suppressor, structural protein; 2.40A {Homo sapiens} SCOP: h.1.18.1
Probab=44.87 E-value=46 Score=25.42 Aligned_cols=36 Identities=25% Similarity=0.275 Sum_probs=31.7
Q ss_pred hhhhH-HHHHHHHHhHHHHHHHHHHHHHHHHHHHhhh
Q 039707 451 VAEDE-AMVIKEMKIMSNKVMELERECLVMRKELQKS 486 (536)
Q Consensus 451 ~~~~e-~~Lk~el~~M~~rv~eLEkec~~Mk~~~~k~ 486 (536)
....| -.||.|++.=...++.||.|-+.||..+..+
T Consensus 14 ~Lk~ENshLrrEL~dNS~~lskLE~ets~mKevlk~l 50 (54)
T 1deb_A 14 ALKMENSNLRQELEDNSNHLTKLETEASNMKEVLKQL 50 (54)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhhHHHHHHHhhHHHHHHHHhhhhhHHHHHHHH
Confidence 34667 8899999999999999999999999988776
No 37
>1dip_A Delta-sleep-inducing peptide immunoreactive peptide; structure, leucine zipper, PIG, acetylation; NMR {Sus scrofa} SCOP: h.1.12.1
Probab=44.45 E-value=22 Score=29.17 Aligned_cols=31 Identities=19% Similarity=0.372 Sum_probs=26.9
Q ss_pred hhH-HHHHHHHHhHHHHHHHHHHHHHHHHHHH
Q 039707 453 EDE-AMVIKEMKIMSNKVMELERECLVMRKEL 483 (536)
Q Consensus 453 ~~e-~~Lk~el~~M~~rv~eLEkec~~Mk~~~ 483 (536)
..| +.||..+..+-.|+.+||.|+.-+|+-.
T Consensus 14 REEVevLKe~I~EL~e~~~qLE~EN~~Lk~~a 45 (78)
T 1dip_A 14 REEVEILKEQIRELVEKNSQLERENTLLKTLA 45 (78)
T ss_dssp TTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 344 9999999999999999999999988754
No 38
>1pd7_B MAD1; PAH2, SIN3, eukaryotic transcriptional regulation, protein-protein interactions; NMR {Mus musculus}
Probab=38.89 E-value=12 Score=24.83 Aligned_cols=17 Identities=41% Similarity=0.557 Sum_probs=14.6
Q ss_pred CchHHHHhhHhhhcccc
Q 039707 53 ENVIPIIGLADYLEMTE 69 (536)
Q Consensus 53 ~NVa~LrCAAeyLeMtE 69 (536)
.||..|-=||||||=-|
T Consensus 3 ~nvq~LLeAAeyLErrE 19 (26)
T 1pd7_B 3 MNIQMLLEAADYLERRE 19 (26)
T ss_dssp CSTHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHH
Confidence 49999999999999654
No 39
>1ci6_A Transcription factor ATF-4; BZIP; 2.60A {Homo sapiens} SCOP: h.1.3.1
Probab=26.37 E-value=1.1e+02 Score=23.70 Aligned_cols=28 Identities=11% Similarity=0.188 Sum_probs=14.8
Q ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHH
Q 039707 456 AMVIKEMKIMSNKVMELERECLVMRKEL 483 (536)
Q Consensus 456 ~~Lk~el~~M~~rv~eLEkec~~Mk~~~ 483 (536)
+.|..+-+.++.++..|++|...+++-|
T Consensus 33 ~~L~~~N~~L~~~i~~L~~E~~~Lk~ll 60 (63)
T 1ci6_A 33 KELEKKNEALKERADSLAKEIQYLKDLI 60 (63)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4455555555555555555555555444
No 40
>2xv5_A Lamin-A/C; structural protein, intermediate filaments, nuclear membrane LEFT-handed coiled coil, right-handed coiled coil; HET: MSE; 2.40A {Homo sapiens}
Probab=25.77 E-value=85 Score=25.44 Aligned_cols=29 Identities=28% Similarity=0.300 Sum_probs=19.1
Q ss_pred HHHHHHhHHHHHHHHHHHHHHHHHHHhhh
Q 039707 458 VIKEMKIMSNKVMELERECLVMRKELQKS 486 (536)
Q Consensus 458 Lk~el~~M~~rv~eLEkec~~Mk~~~~k~ 486 (536)
|..|.+..+..+.+||.+...+|++|+..
T Consensus 3 l~~e~~~~~~~i~~lE~eL~~~r~e~~~q 31 (74)
T 2xv5_A 3 SARERDTSRRLLAEKEREMAEMRARMQQQ 31 (74)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44566677777777777777776666543
No 41
>3v9r_B MHF2, uncharacterized protein YDL160C-A; histone fold, fanconi anemia, DNA repair, DNA BI protein; 2.40A {Saccharomyces cerevisiae}
Probab=25.46 E-value=36 Score=28.73 Aligned_cols=38 Identities=18% Similarity=0.152 Sum_probs=29.9
Q ss_pred hHHHHHHHHHHHcCCCCCCCchhhHHHHHHHHHHHHHH
Q 039707 300 IECLRRILRNFCGSYSPSSQFPGYMKVAELIEKFLAEI 337 (536)
Q Consensus 300 Vd~V~Ril~~Fl~~~~~~~~~~~l~~VakLvD~YLaEI 337 (536)
.+++.||+..|.......-+...+..|+|.||-|..|.
T Consensus 4 ~~llaRIL~~~F~~~kTrIt~da~~lv~kY~diFVrEA 41 (88)
T 3v9r_B 4 KEALIKILSQNEGGNDMKIADEVVPMIQKYLDIFIDEA 41 (88)
T ss_dssp SHHHHHHHTTTSCSSCCEECTTTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCceecHHHHHHHHHHHHHHHHHH
Confidence 46899999977665544335678999999999999984
No 42
>1go4_E MAD1 (mitotic arrest deficient)-like 1; mitotic spindle checkpoint, cell cycle, mitosis, nuclear Pro; 2.05A {Homo sapiens} SCOP: h.1.22.1
Probab=24.50 E-value=82 Score=27.10 Aligned_cols=26 Identities=31% Similarity=0.238 Sum_probs=13.4
Q ss_pred HHHhHHHHHHHHHHHHHHHHHHHhhh
Q 039707 461 EMKIMSNKVMELERECLVMRKELQKS 486 (536)
Q Consensus 461 el~~M~~rv~eLEkec~~Mk~~~~k~ 486 (536)
++...+.++.+||+|+..++++++.+
T Consensus 13 ~~~~lr~ei~~Le~E~~rLr~~~~~L 38 (100)
T 1go4_E 13 EADTLRLKVEELEGERSRLEEEKRML 38 (100)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455555555555555555555443
No 43
>1e09_A PRU AV 1; allergen, major cherry allergen, pathogenesis-related protein, heteronuclear structure; NMR {Prunus avium} SCOP: d.129.3.1 PDB: 1h2o_A 2lpx_A
Probab=21.40 E-value=58 Score=29.09 Aligned_cols=35 Identities=11% Similarity=0.293 Sum_probs=23.6
Q ss_pred hcCCCCChHHHHHHhhhhccccCccccccchhhHHHHHHHHhCCCC
Q 039707 338 AADIDLKMNTFLSIVEMSAEVHTVTQRNSDGIYMAIDIYFHKHRYL 383 (536)
Q Consensus 338 A~D~nLk~~KF~~LA~~~ealPd~aR~~~DgLYRAIDiYLkaHp~L 383 (536)
..+.++++.+....- ..-.++|+|||-||.+||..
T Consensus 123 ~~~~~~~~~~~~~~~-----------~~~~~~~k~ie~yll~~~~~ 157 (159)
T 1e09_A 123 KGNVEIKEEHVKAGK-----------EKASNLFKLIETYLKGHPDA 157 (159)
T ss_dssp CSSCCCCHHHHHHHH-----------HHHHHHHHHHHHHHHHCTTS
T ss_pred CCCCCCCHHHHHHHH-----------HHHHHHHHHHHHHHHhChhh
Confidence 355666776553211 12368999999999999963
No 44
>1dh3_A Transcription factor CREB; protein-DNA complex, transcription/DNA complex; HET: DNA; 3.00A {Mus musculus} SCOP: h.1.3.1
Probab=20.29 E-value=1.3e+02 Score=22.74 Aligned_cols=28 Identities=25% Similarity=0.283 Sum_probs=24.6
Q ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHhhh
Q 039707 459 IKEMKIMSNKVMELERECLVMRKELQKS 486 (536)
Q Consensus 459 k~el~~M~~rv~eLEkec~~Mk~~~~k~ 486 (536)
+..++.+-.+|..||.+-..++.++..+
T Consensus 21 k~~~~~LE~~v~~L~~eN~~L~~~~~~L 48 (55)
T 1dh3_A 21 KEYVKSLENRVAVLENQNKTLIEELKAL 48 (55)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3568888899999999999999999887
Done!