Query 039710
Match_columns 331
No_of_seqs 166 out of 1394
Neff 8.5
Searched_HMMs 29240
Date Mon Mar 25 21:38:01 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/039710.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/039710hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3oox_A Putative 2OG-Fe(II) oxy 100.0 1.8E-72 6.1E-77 521.1 27.6 288 9-301 4-308 (312)
2 1gp6_A Leucoanthocyanidin diox 100.0 3.8E-69 1.3E-73 506.7 29.7 283 10-302 45-345 (356)
3 1w9y_A 1-aminocyclopropane-1-c 100.0 2.2E-69 7.4E-74 500.9 21.3 280 10-303 2-294 (319)
4 1odm_A Isopenicillin N synthas 100.0 3.3E-68 1.1E-72 496.1 25.0 286 3-303 1-325 (331)
5 1dcs_A Deacetoxycephalosporin 100.0 2.2E-67 7.5E-72 486.3 17.5 276 10-304 3-307 (311)
6 3on7_A Oxidoreductase, iron/as 100.0 2.6E-64 9E-69 459.0 25.2 259 10-302 2-277 (280)
7 3dkq_A PKHD-type hydroxylase S 95.6 0.03 1E-06 48.9 7.4 78 165-264 100-194 (243)
8 2hbt_A EGL nine homolog 1; pro 95.5 0.17 5.9E-06 44.1 12.2 80 166-264 119-212 (247)
9 2rg4_A Uncharacterized protein 90.8 5 0.00017 33.9 13.0 70 186-267 116-209 (216)
10 2jig_A Prolyl-4 hydroxylase; h 85.1 2.7 9.2E-05 35.6 7.7 47 215-265 170-217 (224)
11 3itq_A Prolyl 4-hydroxylase, a 84.7 3.9 0.00013 34.6 8.4 85 165-264 112-211 (216)
12 2iuw_A Alkylated repair protei 78.4 9.6 0.00033 32.7 8.7 46 213-264 184-229 (238)
13 3tht_A Alkylated DNA repair pr 77.4 3.6 0.00012 37.5 6.0 82 185-267 210-315 (345)
14 3s57_A Alpha-ketoglutarate-dep 69.1 15 0.00053 30.5 7.5 43 214-262 158-200 (204)
15 2opi_A L-fuculose-1-phosphate 65.8 3.6 0.00012 34.6 2.9 36 11-46 125-160 (212)
16 1otj_A Alpha-ketoglutarate-dep 62.2 6.2 0.00021 34.5 3.9 50 9-61 15-64 (283)
17 2fk5_A Fuculose-1-phosphate al 61.0 8.1 0.00028 32.1 4.2 50 11-60 117-175 (200)
18 3i3q_A Alpha-ketoglutarate-dep 59.5 24 0.00084 29.5 6.9 69 185-263 117-201 (211)
19 1e4c_P L-fuculose 1-phosphate 58.9 5.5 0.00019 33.5 2.8 36 11-46 122-157 (215)
20 1pvt_A Sugar-phosphate aldolas 56.5 7.1 0.00024 33.4 3.1 37 10-46 160-196 (238)
21 1oih_A Putative alkylsulfatase 55.9 9.5 0.00032 33.7 4.0 51 10-63 26-77 (301)
22 3o2g_A Gamma-butyrobetaine dio 54.3 6.7 0.00023 36.3 2.8 51 11-64 122-173 (388)
23 3r1j_A Alpha-ketoglutarate-dep 52.8 13 0.00043 33.1 4.2 52 10-64 20-72 (301)
24 2dbn_A Hypothetical protein YB 51.2 5.5 0.00019 37.6 1.6 54 9-63 98-151 (461)
25 2v9l_A Rhamnulose-1-phosphate 49.5 7.7 0.00026 34.0 2.3 36 11-46 179-214 (274)
26 3pvj_A Alpha-ketoglutarate-dep 48.1 13 0.00044 32.6 3.5 50 9-61 13-62 (277)
27 3ocr_A Class II aldolase/adduc 42.4 13 0.00045 32.5 2.6 50 10-59 155-207 (273)
28 3kt7_A PKHD-type hydroxylase T 34.8 72 0.0024 31.3 6.6 69 186-264 137-227 (633)
29 3ghf_A Septum site-determining 34.2 31 0.0011 26.0 3.3 36 14-49 51-86 (120)
30 2irp_A Putative aldolase class 33.7 15 0.00052 30.5 1.5 48 11-59 139-191 (208)
31 3eat_X Pyoverdine biosynthesis 32.6 28 0.00096 30.6 3.2 49 12-63 31-81 (293)
32 1m5a_B Insulin B chain; alpha 30.0 51 0.0017 18.4 2.7 19 23-41 9-27 (30)
33 1nx8_A CARC, carbapenem syntha 29.3 19 0.00065 31.1 1.4 45 10-61 17-61 (273)
34 2z7b_A MLR6791 protein; class 25.2 37 0.0013 29.5 2.6 36 11-46 157-201 (270)
35 2ld7_A Histone deacetylase com 24.2 1.4E+02 0.0048 21.4 5.0 58 6-72 13-71 (94)
36 3m4r_A Uncharacterized protein 23.8 25 0.00086 29.6 1.1 34 12-46 156-190 (222)
37 3ijp_A DHPR, dihydrodipicolina 21.3 1.1E+02 0.0036 26.9 4.8 38 25-62 126-163 (288)
38 4ay7_A Methylcobalamin\: coenz 21.1 1.5E+02 0.005 26.4 5.8 40 24-63 305-348 (348)
39 4f3y_A DHPR, dihydrodipicolina 21.0 1E+02 0.0036 26.6 4.6 38 25-62 111-148 (272)
40 3qy9_A DHPR, dihydrodipicolina 20.7 1E+02 0.0034 26.3 4.4 39 24-62 89-127 (243)
No 1
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15}
Probab=100.00 E-value=1.8e-72 Score=521.09 Aligned_cols=288 Identities=21% Similarity=0.326 Sum_probs=247.9
Q ss_pred CCCCceEeCCCCC--ChhHHHHHHHHHhhcceEEEEcCCCCHHHHHHHHHHHHHhcCCCHHHHhhcCCC-CCCcccCCCc
Q 039710 9 SVRLPVLDLSQPV--SPSFLSSLSEACQEWGFFYVTNHGISQDMFKKVCSFSKRMFSSPTDTKLKLGPS-SCIKTYTPHF 85 (331)
Q Consensus 9 ~~~lPvIDls~~~--~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~-~~~~Gy~~~~ 85 (331)
..+||||||+.+. +.+++++|.+||+++|||||+||||+.++++++++.+++||+||.|+|+++... ...+||++.+
T Consensus 4 ~~~iPvIDls~~~~~~~~~~~~l~~A~~~~GFf~v~nHGi~~~~~~~~~~~~~~fF~lP~e~K~~~~~~~~~~~Gy~~~g 83 (312)
T 3oox_A 4 TSAIDPVSFSLYAKDFTRFAQELGASFERYGFAVLSDYDLDQARIDAAVDSAKAFFALPVETKKQYAGVKGGARGYIPFG 83 (312)
T ss_dssp CCSSCCEETHHHHHCHHHHHHHHHHHHHHHSEEEEESCCSCHHHHHHHHHHHHHHHTSCHHHHGGGBSSGGGTSEEECCC
T ss_pred CCCCCeEEChHhcccHHHHHHHHHHHHHhCcEEEEECCCCCHHHHHHHHHHHHHHHCCCHHHHhhhccCCCCcccccccc
Confidence 5679999999763 346789999999999999999999999999999999999999999999999753 3578997655
Q ss_pred cC-------CcccccccccCCCc--hhhhhhhhhccCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcchhhhH
Q 039710 86 IA-------SPYFESLRVSGPDY--FAAAKASACVLFGQQSSDFSELLQEYGIKMVELSQRISKIILMSLGGDYERKFYE 156 (331)
Q Consensus 86 ~~-------~~~~e~~~~~~~~~--~~~~~~~~~~~~p~~~p~fr~~~~~y~~~~~~la~~ll~~la~~Lg~~~~~~~~~ 156 (331)
.+ .+++|.+.+..... .........+.||...|+||+.+++|+++|.+++.+|+++|+++|| +++++|.
T Consensus 84 ~e~~~~~~~~D~kE~~~~~~~~~~~~~~~~~~~~n~wP~~~p~fr~~~~~y~~~~~~l~~~ll~~la~~Lg--l~~~~f~ 161 (312)
T 3oox_A 84 VETAKGADHYDLKEFWHMGRDLPPGHRFRAHMADNVWPAEIPAFKHDVSWLYNSLDGMGGKVLEAIATYLK--LERDFFK 161 (312)
T ss_dssp CCCSTTSCSCCCCEEEEECCCCCTTCGGGGTSCCCCCCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHTT--SCTTTTH
T ss_pred ceecCCCCCCCceeeeEeecCCCcCCcchhccCCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC--cCHHHHH
Confidence 32 24567666532110 0111123457899999999999999999999999999999999999 5689999
Q ss_pred hhhcCccceeeecccCCCCCCCCcccccccccccCCCceEEEeeCCCCceeEEccCCCeEEeccCCCeEEEEcchhhHHh
Q 039710 157 SEFGKCQGYLRIINYTPPETVKEDKELEGLGMHTDMSCLTLVYQDEIGGLQMRSKEGEWIDIFPCENSLVVNVGDLMQAW 236 (331)
Q Consensus 157 ~~~~~~~~~lrl~~Y~p~~~~~~~~~~~g~~~HtD~g~lTlL~qd~~~GLqv~~~~g~W~~V~p~~g~~iVn~Gd~l~~~ 236 (331)
+.+..+.+.||++||||... ... ..|+++|||+|+||||+||+++||||++++|+|++|+|++|++|||+||+||+|
T Consensus 162 ~~~~~~~~~lr~~~Ypp~~~--~~~-~~g~~~HtD~g~lTlL~qd~v~GLqV~~~~g~W~~V~p~pg~~vVNiGD~l~~~ 238 (312)
T 3oox_A 162 PTVQDGNSVLRLLHYPPIPK--DAT-GVRAGAHGDINTITLLLGAEEGGLEVLDRDGQWLPINPPPGCLVINIGDMLERL 238 (312)
T ss_dssp HHHTTCCCEEEEEEECCCSS--CCC---CEEEECCCSSEEEEECCTTSCEEEECTTSCEEECCCCSSCEEEEECHHHHHH
T ss_pred HHhcCCcceeeeEecCCCCC--CcC-CcCccceecCceEEEEeEcCcCceEEECCCCcEEECCCCCCeEEEEhHHHHHHH
Confidence 99988888999988876443 223 389999999999999999999999999999999999999999999999999999
Q ss_pred hCCccccCccccccCC----CCceEEEEEeecCCCCcEEeCCccccCCCCCCCCC-CccHHHHHHHHHhc
Q 039710 237 SNGRLRSSEHRVVLKR----FINRLSLAFFWGFEDEKVIRAPDEVVGEGCSRIYK-PFVCLDYLKFRENN 301 (331)
Q Consensus 237 TnG~~~s~~HRV~~~~----~~~R~Si~~F~~p~~d~~i~p~~~~~~~~~~~~y~-~~~~~e~~~~~~~~ 301 (331)
|||+||||.|||+.++ ..+||||+||++|+.|++|.|+++++++++|++|+ |+|++||++.|+++
T Consensus 239 TnG~~kS~~HRVv~~~~~~~~~~R~Sia~F~~P~~d~~i~pl~~~v~~~~p~~y~~~~t~~eyl~~r~~~ 308 (312)
T 3oox_A 239 TNNVLPSTVHRVVNPPPERRGVPRYSTPFFLHFASDYEIKTLQNCVTAENPDRYPESITADEFLQQRLRE 308 (312)
T ss_dssp TTTSSCCCCEEECCCCGGGTTSCEEECCEEECCCTTCEECCCGGGCCSSSCCSCSSCEEHHHHHHHHHHH
T ss_pred hCCeecCCCceEeCCCccCCCCCEEEEEEEecCCCCcEEecCccccCCCCcccCCCCeeHHHHHHHHHHH
Confidence 9999999999998763 46799999999999999999999999998999999 99999999999863
No 2
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A*
Probab=100.00 E-value=3.8e-69 Score=506.65 Aligned_cols=283 Identities=24% Similarity=0.374 Sum_probs=245.2
Q ss_pred CCCceEeCCCCCC------hhHHHHHHHHHhhcceEEEEcCCCCHHHHHHHHHHHHHhcCCCHHHHhhcCCCC---CCcc
Q 039710 10 VRLPVLDLSQPVS------PSFLSSLSEACQEWGFFYVTNHGISQDMFKKVCSFSKRMFSSPTDTKLKLGPSS---CIKT 80 (331)
Q Consensus 10 ~~lPvIDls~~~~------~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~---~~~G 80 (331)
.+||||||+.+.. .+++++|.+||+++|||||+||||+.++++++++.+++||+||.|+|+++.... ..+|
T Consensus 45 ~~iPvIDls~l~~~~~~~~~~~~~~l~~A~~~~GFF~v~nHGi~~~l~~~~~~~~~~FF~lP~eeK~~~~~~~~~~~~~G 124 (356)
T 1gp6_A 45 PQVPTIDLKNIESDDEKIRENCIEELKKASLDWGVMHLINHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKIQG 124 (356)
T ss_dssp CCCCEEECTTTTCSCHHHHHHHHHHHHHHHHHTSEEEEESCSCCHHHHHHHHHHHHHHHTSCHHHHGGGBCBGGGTBCSE
T ss_pred CCCCEEEchhccCCChHHHHHHHHHHHHHHHhCCEEEEeCCCCCHHHHHHHHHHHHHHHCCCHHHHHhhcccccccCccc
Confidence 3699999998753 237899999999999999999999999999999999999999999999996542 4678
Q ss_pred cCCCccC-----CcccccccccCCCchhhhhhhhhccCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcchhhh
Q 039710 81 YTPHFIA-----SPYFESLRVSGPDYFAAAKASACVLFGQQSSDFSELLQEYGIKMVELSQRISKIILMSLGGDYERKFY 155 (331)
Q Consensus 81 y~~~~~~-----~~~~e~~~~~~~~~~~~~~~~~~~~~p~~~p~fr~~~~~y~~~~~~la~~ll~~la~~Lg~~~~~~~~ 155 (331)
|.+.... .+++|.+.+.... ......+.||...|+||+.+++|+++|.+++.+|+++|+++|| +++++|
T Consensus 125 y~~~~~~~~~~~~d~kE~~~~~~~p----~~~~~~~~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lg--l~~~~f 198 (356)
T 1gp6_A 125 YGSKLANNASGQLEWEDYFFHLAYP----EEKRDLSIWPKTPSDYIEATSEYAKCLRLLATKVFKALSVGLG--LEPDRL 198 (356)
T ss_dssp EECCCCCSTTCCCCSCEEEEEEEES----GGGCCGGGSCCSSTTHHHHHHHHHHHHHHHHHHHHHHHHHHTT--SCTTHH
T ss_pred cCcCcccCCCCCCChhheeeeecCC----ccccccccCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHcC--CCHHHH
Confidence 8755421 1355555442110 1113467899999999999999999999999999999999999 568999
Q ss_pred Hhhhc---CccceeeecccCCCCCCCCcccccccccccCCCceEEEeeCCCCceeEEccCCCeEEeccCCCeEEEEcchh
Q 039710 156 ESEFG---KCQGYLRIINYTPPETVKEDKELEGLGMHTDMSCLTLVYQDEIGGLQMRSKEGEWIDIFPCENSLVVNVGDL 232 (331)
Q Consensus 156 ~~~~~---~~~~~lrl~~Y~p~~~~~~~~~~~g~~~HtD~g~lTlL~qd~~~GLqv~~~~g~W~~V~p~~g~~iVn~Gd~ 232 (331)
.+.+. .+.+.||++|||| ++ +++...|+++|||+|+||||+||.++||||+ ++|+|++|+|++|++|||+||+
T Consensus 199 ~~~~~~~~~~~~~lrl~~YPp-~~--~~~~~~g~~~HtD~g~lTlL~qd~v~GLQV~-~~g~Wi~V~p~pgalvVNiGD~ 274 (356)
T 1gp6_A 199 EKEVGGLEELLLQMKINYYPK-CP--QPELALGVEAHTDVSALTFILHNMVPGLQLF-YEGKWVTAKCVPDSIVMHIGDT 274 (356)
T ss_dssp HHHTTHHHHCEEEEEEEEECC-CS--STTTCCSEEEECCCSSEEEEEECSCCCEEEE-ETTEEEECCCCTTCEEEEECHH
T ss_pred HHHhcccCCccceeeeeecCC-CC--CcccccCcCCccCCCeEEEEEEcCCCCeEEe-cCCcEEECcCCCCeEEEEeccH
Confidence 98886 4678899988865 44 3455789999999999999999999999999 7999999999999999999999
Q ss_pred hHHhhCCccccCccccccCCCCceEEEEEeecCCCCc-EEeCCccccCCCCCCCCCCccHHHHHHHHHhcC
Q 039710 233 MQAWSNGRLRSSEHRVVLKRFINRLSLAFFWGFEDEK-VIRAPDEVVGEGCSRIYKPFVCLDYLKFRENND 302 (331)
Q Consensus 233 l~~~TnG~~~s~~HRV~~~~~~~R~Si~~F~~p~~d~-~i~p~~~~~~~~~~~~y~~~~~~e~~~~~~~~~ 302 (331)
||+||||+||||+|||+.++..+||||+||++|+.|+ +|.|+++++++++|++|+++|++||++.+++..
T Consensus 275 l~~~TnG~~kS~~HRVv~~~~~~R~Sia~F~~P~~d~~~i~pl~~~~~~~~p~~y~~~t~~eyl~~~~~~~ 345 (356)
T 1gp6_A 275 LEILSNGKYKSILHRGLVNKEKVRISWAVFCEPPKDKIVLKPLPEMVSVESPAKFPPRTFAQHIEHKLFGK 345 (356)
T ss_dssp HHHHTTTSSCCCCEEECCCSSCCEEEEEEEEECCTTTCEECCCGGGCCSSSCCSSCCEEHHHHHHHHHHHH
T ss_pred HHHhcCCEeeccCceecCCCCCCEEEEEEeecCCCCCcEEeCChhhcCCCCCccCCCccHHHHHHHHHHhc
Confidence 9999999999999999998889999999999999999 999999999988999999999999999887543
No 3
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X
Probab=100.00 E-value=2.2e-69 Score=500.90 Aligned_cols=280 Identities=25% Similarity=0.469 Sum_probs=237.5
Q ss_pred CCCceEeCCCCC---ChhHHHHHHHHHhhcceEEEEcCCCCHHHHHHHHHHHHHhcCCCHHHHhhcCCCCCCcccCCCcc
Q 039710 10 VRLPVLDLSQPV---SPSFLSSLSEACQEWGFFYVTNHGISQDMFKKVCSFSKRMFSSPTDTKLKLGPSSCIKTYTPHFI 86 (331)
Q Consensus 10 ~~lPvIDls~~~---~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~~~~Gy~~~~~ 86 (331)
.+||||||+.+. +.+++++|.+||+++|||||+||||+.++++++++.+++||+||.|+|+++... .+||.+...
T Consensus 2 ~~iPvIDls~l~~~~~~~~~~~l~~A~~~~GFF~v~nHGi~~~l~~~~~~~~~~FF~lP~e~K~~~~~~--~~Gy~~~~~ 79 (319)
T 1w9y_A 2 ENFPIISLDKVNGVERAATMEMIKDACENWGFFELVNHGIPREVMDTVEKMTKGHYKKCMEQRFKELVA--SKALEGVQA 79 (319)
T ss_dssp CCCCEEEGGGGGSTTHHHHHHHHHHHHHHTSEEEEESCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHTTCCC
T ss_pred CCCCEEECcccCcccHHHHHHHHHHHHHhCCEEEEEcCCCCHHHHHHHHHHHHHHHcCCHHHHhhhccC--CCCCCcccc
Confidence 369999999864 235789999999999999999999999999999999999999999999998532 357865432
Q ss_pred C---CcccccccccCCCchhhhhhhhhccCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcchhhhHhhhcC--
Q 039710 87 A---SPYFESLRVSGPDYFAAAKASACVLFGQQSSDFSELLQEYGIKMVELSQRISKIILMSLGGDYERKFYESEFGK-- 161 (331)
Q Consensus 87 ~---~~~~e~~~~~~~~~~~~~~~~~~~~~p~~~p~fr~~~~~y~~~~~~la~~ll~~la~~Lg~~~~~~~~~~~~~~-- 161 (331)
+ .+++|.+.+... + ....+.||...|+||+.+++|+++|.+++.+|+++|+++|| +++++|.+.+..
T Consensus 80 e~~~~d~ke~~~~~~~-----p-~~~~~~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lg--l~~~~f~~~~~~~~ 151 (319)
T 1w9y_A 80 EVTDMDWESTFFLKHL-----P-ISNISEVPDLDEEYREVMRDFAKRLEKLAEELLDLLCENLG--LEKGYLKNAFYGSK 151 (319)
T ss_dssp CGGGCCCCEEEEEEEE-----S-CCGGGGCTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT--CCTTHHHHHHHTTT
T ss_pred cCCCCChhhheeeecC-----C-cccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcC--CCHHHHHHHhcCcC
Confidence 2 234555443210 0 11357899999999999999999999999999999999999 568899988863
Q ss_pred -ccceeeecccCCCCCCCCcccccccccccCCCceEEEeeC-CCCceeEEccCCCeEEeccCCCeEEEEcchhhHHhhCC
Q 039710 162 -CQGYLRIINYTPPETVKEDKELEGLGMHTDMSCLTLVYQD-EIGGLQMRSKEGEWIDIFPCENSLVVNVGDLMQAWSNG 239 (331)
Q Consensus 162 -~~~~lrl~~Y~p~~~~~~~~~~~g~~~HtD~g~lTlL~qd-~~~GLqv~~~~g~W~~V~p~~g~~iVn~Gd~l~~~TnG 239 (331)
..+.+|++|||| ++ +++...|+++|||+|+||||+|| .++||||+ ++|+|++|+|.||++|||+||+||+||||
T Consensus 152 ~~~~~lrl~~YPp-~~--~~~~~~g~~~HtD~g~lTlL~qd~~v~GLQV~-~~g~Wi~V~p~pgalvVNiGD~l~~~SnG 227 (319)
T 1w9y_A 152 GPNFGTKVSNYPP-CP--KPDLIKGLRAHTDAGGIILLFQDDKVSGLQLL-KDGQWIDVPPMRHSIVVNLGDQLEVITNG 227 (319)
T ss_dssp CCEEEEEEEECCC-CS--CGGGGSSCCCBCCSSSEEEEEESSSCCCEEEE-ETTEEEECCCCTTCEEEEECHHHHHHTTT
T ss_pred CccceeEEEecCC-Cc--ccccccccccccCCCceEEEEecCCCCeeeEe-eCCeEEEcccCCCcEEEEhHHHHHHHhCC
Confidence 557899988864 54 45567899999999999999995 79999998 79999999999999999999999999999
Q ss_pred ccccCccccccCCCCceEEEEEeecCCCCcEEeCCccccCCC---CCCCCCCccHHHHHHHHHhcCc
Q 039710 240 RLRSSEHRVVLKRFINRLSLAFFWGFEDEKVIRAPDEVVGEG---CSRIYKPFVCLDYLKFRENNDE 303 (331)
Q Consensus 240 ~~~s~~HRV~~~~~~~R~Si~~F~~p~~d~~i~p~~~~~~~~---~~~~y~~~~~~e~~~~~~~~~~ 303 (331)
+||||.|||+.++..+|||++||++|+.|++|.|++++++++ +|++|+++|++||++.+++..+
T Consensus 228 ~~kS~~HRVv~~~~~~R~Sia~F~~p~~d~~i~pl~~l~~~~~~~~p~~Y~~~t~~ey~~~~~~~~~ 294 (319)
T 1w9y_A 228 KYKSVMHRVIAQKDGARMSLASFYNPGSDAVIYPAPALVEKEAEENKQVYPKFVFDDYMKLYAGLKF 294 (319)
T ss_dssp SSCCCCEEECCCSSSCCEEEEEEEECCTTCEECCCGGGC--------CCCCCEEHHHHHHTTTTTTC
T ss_pred eeecccceecCCCCCCceEEEEEecCCCCCeEeCchhhcCcccccCccccCcEeHHHHHHHHHhhhc
Confidence 999999999998889999999999999999999999999887 5999999999999999876554
No 4
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ...
Probab=100.00 E-value=3.3e-68 Score=496.09 Aligned_cols=286 Identities=22% Similarity=0.315 Sum_probs=242.9
Q ss_pred CCCCCCCCCCceEeCCCCCC------hhHHHHHHHHHhhcceEEEEcCCCCHHHHHHHHHHHHHh-cCCCHHHHhhcCCC
Q 039710 3 MPELQISVRLPVLDLSQPVS------PSFLSSLSEACQEWGFFYVTNHGISQDMFKKVCSFSKRM-FSSPTDTKLKLGPS 75 (331)
Q Consensus 3 ~~~~~~~~~lPvIDls~~~~------~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~f-F~lp~e~K~~~~~~ 75 (331)
|.| ++..+||||||+.+.+ .+++++|.+||+++|||||+|||| +++++++.+++| |+||.|+|+++..
T Consensus 1 m~s-~~~~~iPvIDls~l~~~~~~~~~~~~~~l~~A~~~~GFf~v~nHGi---l~~~~~~~~~~F~F~lP~eeK~~~~~- 75 (331)
T 1odm_A 1 MGS-VSKANVPKIDVSPLFGDDQAAKMRVAQQIDAASRDTGFFYAVNHGI---NVQRLSQKTKEFHMSITPEEKWDLAI- 75 (331)
T ss_dssp --C-CCBCCCCEEECGGGGSSCHHHHHHHHHHHHHHHHTTSEEEEESCCC---CHHHHHHHHHHHHHHCCHHHHHHHBC-
T ss_pred CCc-ccCCCCCEEEchHhcCCChHHHHHHHHHHHHHHHhCCEEEEEccce---eHHHHHHHHHhccCCCCHHHHHhhhh-
Confidence 444 4567899999998742 237899999999999999999999 899999999999 9999999999964
Q ss_pred CCCcccCCCccC-------------CcccccccccCCCc--hhhhh----hhhhccCCCC--ChhHHHHHHHHHHHHHHH
Q 039710 76 SCIKTYTPHFIA-------------SPYFESLRVSGPDY--FAAAK----ASACVLFGQQ--SSDFSELLQEYGIKMVEL 134 (331)
Q Consensus 76 ~~~~Gy~~~~~~-------------~~~~e~~~~~~~~~--~~~~~----~~~~~~~p~~--~p~fr~~~~~y~~~~~~l 134 (331)
+||.+.+.+ .+++|.+.+..... .+... ....+.||.. .|+||+.+++|+++|.++
T Consensus 76 ---~Gy~~~~~e~~~~~~~~~~~~~~d~kE~~~~~~~~~~~~p~~~~~~~~~~~n~wP~~~~~p~fr~~~~~y~~~~~~l 152 (331)
T 1odm_A 76 ---RAYNKEHQDQVRAGYYLSIPGKKAVESFCYLNPNFTPDHPRIQAKTPTHEVNVWPDETKHPGFQDFAEQYYWDVFGL 152 (331)
T ss_dssp ---TTTCTTCTTCSSSEEECCBTTTBCCEEEEECCTTCCTTSHHHHTTCTTCCCCCCCCTTTSTTHHHHHHHHHHHHHHH
T ss_pred ---cCCCcCCccccccccccccCCCCChhheEecccCCccccccccccccccCCCCCCCCCCChHHHHHHHHHHHHHHHH
Confidence 678755421 24667766542110 00000 1235789987 899999999999999999
Q ss_pred HHHHHHHHHHHcCCCcchhhhHhhhcCccceee--ecccC------C--CCCCCCccc-ccccccccCCCceEEEeeCCC
Q 039710 135 SQRISKIILMSLGGDYERKFYESEFGKCQGYLR--IINYT------P--PETVKEDKE-LEGLGMHTDMSCLTLVYQDEI 203 (331)
Q Consensus 135 a~~ll~~la~~Lg~~~~~~~~~~~~~~~~~~lr--l~~Y~------p--~~~~~~~~~-~~g~~~HtD~g~lTlL~qd~~ 203 (331)
+..|+++|+++|| +++++|.+.+..+.+.|| ++||| | .++ +++. ..|+++|||+|+||||+||.+
T Consensus 153 ~~~ll~~la~~Lg--l~~~~f~~~~~~~~~~lr~~l~~YP~~~~~~p~~~~~--~~~~~~~g~~~HtD~g~lTlL~qd~v 228 (331)
T 1odm_A 153 SSALLKGYALALG--KEENFFARHFKPDDTLASVVLIRYPYLDPYPEAAIKT--AADGTKLSFEWHEDVSLITVLYQSNV 228 (331)
T ss_dssp HHHHHHHHHHHTT--SCTTTTGGGCCTTTCCCEEEEEEECCCSSCCGGGCEE--CTTSCEEEEEEECCSSSEEEEEECSS
T ss_pred HHHHHHHHHHHhC--CCHHHHHHHhcCcHHHHHHHHhhCCCcccccccccCC--CccccccccccccCCCeEEEEeeCCC
Confidence 9999999999999 568999999888888999 99997 4 244 3343 789999999999999999999
Q ss_pred CceeEEccCCCeEEeccCCCeEEEEcchhhHHhhCCccccCccccccCCCCceEEEEEeecCCCCcEEeCCccccCCCCC
Q 039710 204 GGLQMRSKEGEWIDIFPCENSLVVNVGDLMQAWSNGRLRSSEHRVVLKRFINRLSLAFFWGFEDEKVIRAPDEVVGEGCS 283 (331)
Q Consensus 204 ~GLqv~~~~g~W~~V~p~~g~~iVn~Gd~l~~~TnG~~~s~~HRV~~~~~~~R~Si~~F~~p~~d~~i~p~~~~~~~~~~ 283 (331)
+||||++++| |++|+|++|++|||+||+||+||||+||||.|||+.+ ..+||||+||++|+.|++|.|+++++++++
T Consensus 229 ~GLQV~~~~g-Wi~V~p~pgalvVNiGD~l~~~TnG~~kS~~HRVv~~-~~~R~Sia~F~~P~~d~~i~pl~~~~~~~~- 305 (331)
T 1odm_A 229 QNLQVETAAG-YQDIEADDTGYLINCGSYMAHLTNNYYKAPIHRVKWV-NAERQSLPFFVNLGYDSVIDPFDPREPNGK- 305 (331)
T ss_dssp CCEEEEETTE-EEECCCCTTSEEEEECHHHHHHTTTSSCCCCEEEECC-CSCEEEEEEEECCCTTCBCCCCCTTSTTCC-
T ss_pred CCEEEEcCCC-eEECCCCCCeEEEEccHHHHHHhCCEeeCCCceeCCC-CCCEEEEEEEEcCCCCCEEeCCCccccccc-
Confidence 9999999999 9999999999999999999999999999999999864 789999999999999999999999998877
Q ss_pred CCCCCccHHHHHHHHHhcCc
Q 039710 284 RIYKPFVCLDYLKFRENNDE 303 (331)
Q Consensus 284 ~~y~~~~~~e~~~~~~~~~~ 303 (331)
++|+|+|++||++.+++...
T Consensus 306 ~~y~~~t~~e~l~~~~~~~~ 325 (331)
T 1odm_A 306 SDREPLSYGDYLQNGLVSLI 325 (331)
T ss_dssp CSSCCCBHHHHHHHHHHHHH
T ss_pred cCCCCccHHHHHHHHHHHHH
Confidence 89999999999999987553
No 5
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A*
Probab=100.00 E-value=2.2e-67 Score=486.35 Aligned_cols=276 Identities=18% Similarity=0.224 Sum_probs=229.8
Q ss_pred CCCceEeCCCCCChhHHHHHHHHHhhcceEEEEcCCCCHHHHHHHHHHHHHhcCCC-HHHHhhcCCC--CCCcccCCCcc
Q 039710 10 VRLPVLDLSQPVSPSFLSSLSEACQEWGFFYVTNHGISQDMFKKVCSFSKRMFSSP-TDTKLKLGPS--SCIKTYTPHFI 86 (331)
Q Consensus 10 ~~lPvIDls~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~lp-~e~K~~~~~~--~~~~Gy~~~~~ 86 (331)
.+||||||+.+.+.+..++|.+||+++|||||+||||+.++++++++.+++||+|| .|+|+++... ...+||.+.+.
T Consensus 3 ~~iPvIDls~l~~~~~~~~l~~A~~~~GFf~l~nHGi~~~l~~~~~~~~~~fF~lP~~e~K~~~~~~~~~~~~Gy~~~~~ 82 (311)
T 1dcs_A 3 TTVPTFSLAELQQGLHQDEFRRCLRDKGLFYLTDCGLTDTELKSAKDLVIDFFEHGSEAEKRAVTSPVPTMRRGFTGLES 82 (311)
T ss_dssp CCCCEEEHHHHHTTCSHHHHHHHHHHTCEEEEESSSCCHHHHHHHHHHHHHHHHHCCHHHHHHTBCSSCCSSSEEEEC--
T ss_pred CCCcEEEchhhcCCCHHHHHHHHHHhCcEEEEECCCCCHHHHHHHHHHHHHHHcCCcHHHhHHhhccCCCCCCceeeccc
Confidence 46999999976433334599999999999999999999999999999999999999 9999999754 35789986543
Q ss_pred C-----------CcccccccccCCCchhhhhhhhhccCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCc--chh
Q 039710 87 A-----------SPYFESLRVSGPDYFAAAKASACVLFGQQSSDFSELLQEYGIKMVELSQRISKIILMSLGGDY--ERK 153 (331)
Q Consensus 87 ~-----------~~~~e~~~~~~~~~~~~~~~~~~~~~p~~~p~fr~~~~~y~~~~~~la~~ll~~la~~Lg~~~--~~~ 153 (331)
+ .+++|.+.+... .+.|| .|+||+.+++|+++|.+++.+|+++|+++||+.. +++
T Consensus 83 e~~~~~~~~~~~~d~~E~~~~~~~----------~n~wP--~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~~~~ 150 (311)
T 1dcs_A 83 ESTAQITNTGSYSDYSMCYSMGTA----------DNLFP--SGDFERIWTQYFDRQYTASRAVAREVLRATGTEPDGGVE 150 (311)
T ss_dssp ---------------CEEEEECSS----------SCCCS--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCTTCHH
T ss_pred cccccccCCCCCCCcceeeeccCC----------CCCCC--ChHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcCcHh
Confidence 2 124444444221 46799 8999999999999999999999999999999411 577
Q ss_pred hhHhhhcCccceeeecccCCCCCCCCccc--ccccccccCCCceEEEeeC-CCCc---eeEEccCCCeEEeccCCCeEEE
Q 039710 154 FYESEFGKCQGYLRIINYTPPETVKEDKE--LEGLGMHTDMSCLTLVYQD-EIGG---LQMRSKEGEWIDIFPCENSLVV 227 (331)
Q Consensus 154 ~~~~~~~~~~~~lrl~~Y~p~~~~~~~~~--~~g~~~HtD~g~lTlL~qd-~~~G---Lqv~~~~g~W~~V~p~~g~~iV 227 (331)
+|.+. .+.+|++||||... ..... ..|+++|||+|+||||+|| .++| |||++ +|+|++|+|++|++||
T Consensus 151 ~f~~~----~~~lrl~~YPp~~~-~~~~~~~~~g~~~HtD~g~lTlL~qd~~v~G~~~LqV~~-~g~W~~V~p~pg~lvV 224 (311)
T 1dcs_A 151 AFLDC----EPLLRFRYFPQVPE-HRSAEEQPLRMAPHYDLSMVTLIQQTPCANGFVSLQAEV-GGAFTDLPYRPDAVLV 224 (311)
T ss_dssp HHHSC----CCEEEEEEECC------------CCEEEEEECSSEEEEEEECCTTCCCCEEEEE-TTEEEECCCCTTCEEE
T ss_pred HHhhc----chhhheecCCCCCc-ccccCccccccccccCCCeEEEEecCCCCCCceeEEEEe-CCEEEeCcCCCCeEEE
Confidence 77654 67899988865332 11112 5789999999999999999 8999 99996 9999999999999999
Q ss_pred EcchhhHHhhCCccccCccccccCC-----CCceEEEEEeecCCCCcEEeCCccccCCCCCCCC--CCccHHHHHHHHHh
Q 039710 228 NVGDLMQAWSNGRLRSSEHRVVLKR-----FINRLSLAFFWGFEDEKVIRAPDEVVGEGCSRIY--KPFVCLDYLKFREN 300 (331)
Q Consensus 228 n~Gd~l~~~TnG~~~s~~HRV~~~~-----~~~R~Si~~F~~p~~d~~i~p~~~~~~~~~~~~y--~~~~~~e~~~~~~~ 300 (331)
|+||+||+||||+||||+|||+.++ ..+||||+||++|+.|++|. +++++++++|++| +++|++||++.+++
T Consensus 225 NiGD~l~~~TnG~~kS~~HRVv~~~~~~~~~~~R~Si~~F~~p~~d~~i~-l~~~~~~~~p~~y~~~~~t~~ey~~~~~~ 303 (311)
T 1dcs_A 225 FCGAIATLVTGGQVKAPRHHVAAPRRDQIAGSSRTSSVFFLRPNADFTFS-VPLARECGFDVSLDGETATFQDWIGGNYV 303 (311)
T ss_dssp EECHHHHHHTTSCSCCCCEEECCC----CTTCCEEEEEEEECCCTTCEEE-HHHHHHTTCCCCCCSSEEEHHHHHCSSCC
T ss_pred EHHHHHHHHhCCcccCCCceEeCCCcccCCCCCeEEEEEEEcCCCCcEEe-CCcccCCCCccccCCCCccHHHHHHHHHH
Confidence 9999999999999999999999987 78999999999999999999 9999988889999 99999999998887
Q ss_pred cCcC
Q 039710 301 NDEG 304 (331)
Q Consensus 301 ~~~~ 304 (331)
..+.
T Consensus 304 ~~~~ 307 (311)
T 1dcs_A 304 NIRR 307 (311)
T ss_dssp CEEC
T ss_pred HHhc
Confidence 6553
No 6
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis}
Probab=100.00 E-value=2.6e-64 Score=459.01 Aligned_cols=259 Identities=22% Similarity=0.339 Sum_probs=213.7
Q ss_pred CCCceEeCCCCCChhHHHHHHHHHhhcceEEEEcCCCCHHHHHHHHHHHHHhcCCCHHHHhhcCCC-CCCcccCCCc-cC
Q 039710 10 VRLPVLDLSQPVSPSFLSSLSEACQEWGFFYVTNHGISQDMFKKVCSFSKRMFSSPTDTKLKLGPS-SCIKTYTPHF-IA 87 (331)
Q Consensus 10 ~~lPvIDls~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~-~~~~Gy~~~~-~~ 87 (331)
++||||||+.. +.+++|.+||+++|||||+||||+.++++++++.+++||++ |+|+++... ...+||.+.. .+
T Consensus 2 ~~IPvIDls~~---~~~~~l~~A~~~~GFF~v~nHGi~~~li~~~~~~~~~FF~l--e~K~k~~~~~~~~~GY~~~~~~e 76 (280)
T 3on7_A 2 MKLETIDYRAA---DSAKRFVESLRETGFGVLSNHPIDKELVERIYTEWQAFFNS--EAKNEFMFNRETHDGFFPASISE 76 (280)
T ss_dssp --CCEEETTST---THHHHHHHHHHHHSEEEEESCSSCHHHHHHHHHHHHHHHTS--GGGGGGBCCTTTCCEEECCC---
T ss_pred CCCCEEECCCh---hHHHHHHHHHHhCCEEEEECCCCCHHHHHHHHHHHHHHhhh--HHHHHhccCCCCCCccccCcccc
Confidence 47999999975 46899999999999999999999999999999999999998 789888543 3578997654 11
Q ss_pred C-------cccccccccCCCchhhhhhhhhccCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcchhh---hHh
Q 039710 88 S-------PYFESLRVSGPDYFAAAKASACVLFGQQSSDFSELLQEYGIKMVELSQRISKIILMSLGGDYERKF---YES 157 (331)
Q Consensus 88 ~-------~~~e~~~~~~~~~~~~~~~~~~~~~p~~~p~fr~~~~~y~~~~~~la~~ll~~la~~Lg~~~~~~~---~~~ 157 (331)
. +++|.+.+ ..||..+|+||+.+++|+++|.+++.+||++|+++||++..+++ |.+
T Consensus 77 ~~~~~~~~D~kE~~~~--------------~p~~~~p~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~~~~~~~~~ 142 (280)
T 3on7_A 77 TAKGHTVKDIKEYYHV--------------YPWGRIPDSLRANILAYYEKANTLASELLEWIETYSPDEIKAKFSIPLPE 142 (280)
T ss_dssp -----CCCCSCEEEEE--------------CTTSCCCGGGHHHHHHHHHHHHHHHHHHHHHHHHTSCHHHHTTCSSCHHH
T ss_pred ccCCCCcccHHHHHhc--------------CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcchhhhhHHHHH
Confidence 1 12222211 13666789999999999999999999999999999884322333 556
Q ss_pred hhcCcc-ceeeecccCCCCCCCCcccccccccccCCCceEEEeeCCCCceeEEccCCCeEEeccCCCeEEEEcchhhHHh
Q 039710 158 EFGKCQ-GYLRIINYTPPETVKEDKELEGLGMHTDMSCLTLVYQDEIGGLQMRSKEGEWIDIFPCENSLVVNVGDLMQAW 236 (331)
Q Consensus 158 ~~~~~~-~~lrl~~Y~p~~~~~~~~~~~g~~~HtD~g~lTlL~qd~~~GLqv~~~~g~W~~V~p~~g~~iVn~Gd~l~~~ 236 (331)
.+..+. +.||++||||... .+.....|+++|||+|+||||+||+++||||++++|+|++|+|+||++|||+||+||+|
T Consensus 143 ~~~~~~~~~lr~~~YP~~~~-~~~~~~~g~~~HtD~g~lTlL~qd~~~GLqV~~~~g~W~~V~p~pg~~vVNiGD~l~~~ 221 (280)
T 3on7_A 143 MIANSHKTLLRILHYPPMTG-DEEMGAIRAAAHEDINLITVLPTANEPGLQVKAKDGSWLDVPSDFGNIIINIGDMLQEA 221 (280)
T ss_dssp HHTTCSSCEEEEEEECCCCT-TCCCCSEEEEEECCCSSEEEEECCSCCCEEEECTTSCEEECCCCTTCEEEEECHHHHHH
T ss_pred HhcCCccceEEEEECCCCCC-ccccCcccccCCCCCCeEEEEEecCCCCeEEEcCCCCEEECcCCCCEEEEEcChHHHHH
Confidence 665554 8899988865443 12234689999999999999999999999999999999999999999999999999999
Q ss_pred hCCccccCccccccCC----CCceEEEEEeecCCCCcEEeCCccccCCCCCCCCCCccHHHHHHHHHhcC
Q 039710 237 SNGRLRSSEHRVVLKR----FINRLSLAFFWGFEDEKVIRAPDEVVGEGCSRIYKPFVCLDYLKFRENND 302 (331)
Q Consensus 237 TnG~~~s~~HRV~~~~----~~~R~Si~~F~~p~~d~~i~p~~~~~~~~~~~~y~~~~~~e~~~~~~~~~ 302 (331)
|||+||||.|||+.++ ..+||||+||++|+.|++|.| ++|++||++.|+++.
T Consensus 222 Tng~~kS~~HRVv~~~~~~~~~~R~Si~~F~~P~~d~~i~p--------------~ita~~~l~~rl~~~ 277 (280)
T 3on7_A 222 SDGYFPSTSHRVINPEGTDKTKSRISLPLFLHPHPSVVLSE--------------RYTADSYLMERLREL 277 (280)
T ss_dssp TTTSSCCCCEEEECCTTCCTTSCEEECCEEECCCTTCBCSS--------------SCBHHHHHHHHHHHT
T ss_pred hCCcccCCCceEeCCCCCCCCCCeEEEEEEEcCCCCCEECC--------------CccHHHHHHHHHHHh
Confidence 9999999999999874 468999999999999998863 589999999998743
No 7
>3dkq_A PKHD-type hydroxylase SBAL_3634; putative oxygenase, structural genomics, JOI for structural genomics, JCSG; 2.26A {Shewanella baltica OS155}
Probab=95.56 E-value=0.03 Score=48.86 Aligned_cols=78 Identities=23% Similarity=0.166 Sum_probs=52.1
Q ss_pred eeeecccCCCCCCCCcccccccccccCCC-----------ceEEEee--C----CCCceeEEccCCCeEEeccCCCeEEE
Q 039710 165 YLRIINYTPPETVKEDKELEGLGMHTDMS-----------CLTLVYQ--D----EIGGLQMRSKEGEWIDIFPCENSLVV 227 (331)
Q Consensus 165 ~lrl~~Y~p~~~~~~~~~~~g~~~HtD~g-----------~lTlL~q--d----~~~GLqv~~~~g~W~~V~p~~g~~iV 227 (331)
.+++++|.+-. -..+|.|.. .+|+++. + ..|.|.+.+..+ =..|+|..|.+|+
T Consensus 100 ~~~~~rY~~G~---------~y~~H~D~~~~~~~~~~~~r~~T~~lYLndp~~~~GGetvf~~~~~-~~~V~P~~G~~v~ 169 (243)
T 3dkq_A 100 PPLFNRYQGGE---------TFGYHIDNAIRSTPDGMIRTDLSATLFLSEPENYQGGELVIQDTYG-QQSIKLSAGSLVL 169 (243)
T ss_dssp EEEEEEECTTC---------EEEEECBCSEEEETTEEEECCEEEEEECSCGGGEEECCEEEEETTE-EEEECCCTTCEEE
T ss_pred cceEEEECCCC---------eeccCCCCCCCCCCCccccceEEEEEEeCCCCCCCCceEEEeeCCC-cEEEecCCCEEEE
Confidence 47888885421 246676653 4555553 3 124477764443 3679999999998
Q ss_pred EcchhhHHhhCCccccCccccccCCCCceEEEEEeec
Q 039710 228 NVGDLMQAWSNGRLRSSEHRVVLKRFINRLSLAFFWG 264 (331)
Q Consensus 228 n~Gd~l~~~TnG~~~s~~HRV~~~~~~~R~Si~~F~~ 264 (331)
.-. .++|+|.......|++++.+++
T Consensus 170 F~s------------~~lH~v~pV~~G~R~~~~~Wi~ 194 (243)
T 3dkq_A 170 YPS------------SSLHQVTPVLSGERTAAFMWLQ 194 (243)
T ss_dssp EET------------TSEEEECCEEEECEEEEEEEEE
T ss_pred ECC------------CCeEcCccccccCEEEEEEehh
Confidence 743 3689998765679999999865
No 8
>2hbt_A EGL nine homolog 1; prolyl hydroxylase, hypoxia inducible factor, HIF, 2- oxoglutarate, oxygenase, oxidoreductase; HET: UN9; 1.60A {Homo sapiens} PDB: 2hbu_A* 2g1m_A* 3hqu_A* 3hqr_A* 2y33_A* 2y34_A* 2g19_A* 3ouj_A* 3ouh_A* 3oui_A*
Probab=95.52 E-value=0.17 Score=44.11 Aligned_cols=80 Identities=21% Similarity=0.301 Sum_probs=53.7
Q ss_pred eeecccCCCCCCCCcccccccccccCCC-----ceEEEee--C-C-----CCceeEEccCC-CeEEeccCCCeEEEEcch
Q 039710 166 LRIINYTPPETVKEDKELEGLGMHTDMS-----CLTLVYQ--D-E-----IGGLQMRSKEG-EWIDIFPCENSLVVNVGD 231 (331)
Q Consensus 166 lrl~~Y~p~~~~~~~~~~~g~~~HtD~g-----~lTlL~q--d-~-----~~GLqv~~~~g-~W~~V~p~~g~~iVn~Gd 231 (331)
+.+.+|++.- .....|.|.. .+|+++. + . .|-|.+++.++ ....|.|..|.+|+.-.+
T Consensus 119 ~~~~~Y~~~G--------~~y~~H~D~~~~~~R~~T~vlYLN~~w~~~~~GG~l~~~~~~~~~~~~v~P~~grlv~F~s~ 190 (247)
T 2hbt_A 119 AMVACYPGNG--------TGYVRHVDNPNGDGRCVTCIYYLNKDWDAKVSGGILRIFPEGKAQFADIEPKFDRLLFFWSD 190 (247)
T ss_dssp EEEEEECSSS--------CCEEEECSSCSCCSEEEEEEEECBTTCCHHHHBCCEEECCTTCSSCEEECCBTTEEEEEECS
T ss_pred EEEEEecCCC--------CcccccccCCCCCCceEEEEEEeCCCCCCCCCceeEEEecCCCCceEEEEcCCCEEEEEecC
Confidence 5666785411 1356677762 5777764 2 1 23478885443 678999999999988643
Q ss_pred hhHHhhCCccccCccccccCCCCceEEEEEeec
Q 039710 232 LMQAWSNGRLRSSEHRVVLKRFINRLSLAFFWG 264 (331)
Q Consensus 232 ~l~~~TnG~~~s~~HRV~~~~~~~R~Si~~F~~ 264 (331)
. -.+|.|.. ....|+||+..++
T Consensus 191 ~----------~~~H~V~p-~~~~R~sit~W~~ 212 (247)
T 2hbt_A 191 R----------RNPHEVQP-AYATRYAITVWYF 212 (247)
T ss_dssp T----------TCCEEECC-BSSCEEEEEEEEE
T ss_pred C----------Cceeeecc-CCCEEEEEEEEEc
Confidence 1 16899977 4579999998765
No 9
>2rg4_A Uncharacterized protein; rhodobacterales, oceanicola granulosus HTCC2516, Q2CBJ1_9RHO structural genomics, PSI-2; 1.90A {Oceanicola granulosus} PDB: 3bvc_A
Probab=90.76 E-value=5 Score=33.89 Aligned_cols=70 Identities=13% Similarity=0.202 Sum_probs=46.6
Q ss_pred cccccCCC-ceEEEe---eC-CCCceeEEccC------------------CCeEEeccCCCeEEEEcchhhHHhhCCccc
Q 039710 186 LGMHTDMS-CLTLVY---QD-EIGGLQMRSKE------------------GEWIDIFPCENSLVVNVGDLMQAWSNGRLR 242 (331)
Q Consensus 186 ~~~HtD~g-~lTlL~---qd-~~~GLqv~~~~------------------g~W~~V~p~~g~~iVn~Gd~l~~~TnG~~~ 242 (331)
...|.+.+ .|+..+ .. +.+-|.+.++. ..+..|.|.+|.+||.-..
T Consensus 116 ~~~H~H~~~~lSgV~Yl~~p~~~G~L~f~~p~~~~~~~~~~~~~~~~~~~~~~~~i~P~~G~lvlFpS~----------- 184 (216)
T 2rg4_A 116 HGSHIHPHSVISGTTYVAMPEGTSALKLEDPRLPFMMAAPTRRKGAREELRTFRSVAPKVGDVLLWESW----------- 184 (216)
T ss_dssp EEEECCTTCSEEEEEEEECCSCSCCEEEECTTGGGCSSSCCCCCCSCGGGCSEEEECCCTTEEEEEETT-----------
T ss_pred ccCccCCCCeEEEEEEEECCCCCccEEEeCCccccccccCcccccCcccCCCeeEecCCCCeEEEECCC-----------
Confidence 35566653 454433 22 23457777642 3667899999999987663
Q ss_pred cCccccccCC-CCceEEEEEeecCCC
Q 039710 243 SSEHRVVLKR-FINRLSLAFFWGFED 267 (331)
Q Consensus 243 s~~HRV~~~~-~~~R~Si~~F~~p~~ 267 (331)
-.|.|.... +.+|+||+|-+.+..
T Consensus 185 -l~H~V~p~~~~~~RiSIsFN~~~~~ 209 (216)
T 2rg4_A 185 -LRHEVPMNMAEEDRISVSFNYAWGE 209 (216)
T ss_dssp -SCEEECCCCSSSCEEEEEEEEEC--
T ss_pred -CEEeccCCCCCCCEEEEEEEeecCC
Confidence 379998864 469999999987754
No 10
>2jig_A Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A {Chlamydomonas reinhardtii} PDB: 3gze_A 2v4a_A 2jij_A
Probab=85.12 E-value=2.7 Score=35.62 Aligned_cols=47 Identities=11% Similarity=0.010 Sum_probs=34.0
Q ss_pred eEEeccCCCeEEEEcchhhHHhhCCcc-ccCccccccCCCCceEEEEEeecC
Q 039710 215 WIDIFPCENSLVVNVGDLMQAWSNGRL-RSSEHRVVLKRFINRLSLAFFWGF 265 (331)
Q Consensus 215 W~~V~p~~g~~iVn~Gd~l~~~TnG~~-~s~~HRV~~~~~~~R~Si~~F~~p 265 (331)
-+.|.|..|.+|+.-- ...+|.. ..++|+|.......||++..+++-
T Consensus 170 ~~~V~P~~G~al~f~~----~~~~g~~d~~~lH~~~PV~~G~K~~~~~Wi~~ 217 (224)
T 2jig_A 170 GLAVKPIKGDALMFYS----LKPDGSNDPASLHGSCPTLKGDKWSATKWIHV 217 (224)
T ss_dssp SEEECCCTTCEEEEES----BCTTSCBCGGGCEEECCEEESEEEEEEEEEES
T ss_pred ceEEecccCcEEEEEe----eCCCCCCCCCCcccCCccccceEEEEEEeEEc
Confidence 4889999999887643 1123433 578999987555789999988764
No 11
>3itq_A Prolyl 4-hydroxylase, alpha subunit domain protei; double-stranded beta helix, alpha-keto dependent non-heme iron oxygenase; 1.40A {Bacillus anthracis str}
Probab=84.69 E-value=3.9 Score=34.64 Aligned_cols=85 Identities=19% Similarity=0.078 Sum_probs=52.1
Q ss_pred eeeecccCCCCCCCCcccccccccccCCC-----------ceEEEee--C-CCCceeEEccCCCeEEeccCCCeEEEEcc
Q 039710 165 YLRIINYTPPETVKEDKELEGLGMHTDMS-----------CLTLVYQ--D-EIGGLQMRSKEGEWIDIFPCENSLVVNVG 230 (331)
Q Consensus 165 ~lrl~~Y~p~~~~~~~~~~~g~~~HtD~g-----------~lTlL~q--d-~~~GLqv~~~~g~W~~V~p~~g~~iVn~G 230 (331)
.+++++|.+.. ...+|.|+. .+|+++. | ..||=-+. ++. =+.|.|..|.+++.-.
T Consensus 112 ~lqv~~Y~~G~---------~y~~H~D~~~~~~~~~~~~R~~T~l~YLnd~~~GGeT~F-p~~-~~~V~P~~G~al~f~~ 180 (216)
T 3itq_A 112 GLHILNYEVDQ---------QYKAHYDYFAEHSRSAANNRISTLVMYLNDVEEGGETFF-PKL-NLSVHPRKGMAVYFEY 180 (216)
T ss_dssp CCEEEEECBTC---------CEEEECSSCCTTSGGGGGCEEEEEEEECSCCSEECCEEE-TTT-TEEECCCTTCEEEEEC
T ss_pred ceeEEEeCCCC---------ccccccCCCcCCCcccCCceEEEEEEecccCCcCceeEe-cCC-CCEEecCCCeEEEEec
Confidence 47888885421 146677753 3777765 2 12342233 221 2789999999887653
Q ss_pred hhhHHhhCCc-cccCccccccCCCCceEEEEEeec
Q 039710 231 DLMQAWSNGR-LRSSEHRVVLKRFINRLSLAFFWG 264 (331)
Q Consensus 231 d~l~~~TnG~-~~s~~HRV~~~~~~~R~Si~~F~~ 264 (331)
- ..+|. -..++|+|.......|+++..+++
T Consensus 181 ~----~~~g~~d~~~lH~~~PV~~G~K~v~~~W~~ 211 (216)
T 3itq_A 181 F----YQDQSLNELTLHGGAPVTKGEKWIATQWVR 211 (216)
T ss_dssp C----CSSHHHHHTTCEEECCEEESCEEEEEEEEE
T ss_pred c----CCCCCCCCccccccceeccccEEEEEeeEe
Confidence 1 11222 246899998755578999988875
No 12
>2iuw_A Alkylated repair protein ALKB homolog 3; oxidoreductase, DNA/RNA repair, demethylase, beta jellyroll; HET: AKG; 1.50A {Homo sapiens} SCOP: b.82.2.10
Probab=78.41 E-value=9.6 Score=32.66 Aligned_cols=46 Identities=17% Similarity=0.158 Sum_probs=35.4
Q ss_pred CCeEEeccCCCeEEEEcchhhHHhhCCccccCccccccCCCCceEEEEEeec
Q 039710 213 GEWIDIFPCENSLVVNVGDLMQAWSNGRLRSSEHRVVLKRFINRLSLAFFWG 264 (331)
Q Consensus 213 g~W~~V~p~~g~~iVn~Gd~l~~~TnG~~~s~~HRV~~~~~~~R~Si~~F~~ 264 (331)
+..+.+.-.+|.++|.-|+.=..|..|.-+.. .....|+||.|=.-
T Consensus 184 ~~~~~i~L~~gsllvM~G~~r~~w~H~I~~~~------~~~~~RIsLTfR~v 229 (238)
T 2iuw_A 184 VERVKIPLDHGTLLIMEGATQADWQHRVPKEY------HSREPRVNLTFRTV 229 (238)
T ss_dssp CCEEEEEECTTCEEEEEETHHHHEEEEECCCS------SCCCCEEEEEEECC
T ss_pred CceEEEEcCCCCEEEEChhhhCccEecCCCcC------CCCCCEEEEEeeec
Confidence 36899999999999999998778876654321 13579999999753
No 13
>3tht_A Alkylated DNA repair protein ALKB homolog 8; structural genomics, PSI-biology, northeast structural genom consortium, NESG; HET: AKG; 3.01A {Homo sapiens} PDB: 3thp_A*
Probab=77.44 E-value=3.6 Score=37.52 Aligned_cols=82 Identities=18% Similarity=0.186 Sum_probs=55.5
Q ss_pred ccccccCCC------ceEEEeeCCCCceeEEccCCCeEEeccCCCeEEEEcchhhHHhhCCccccCcccccc--------
Q 039710 185 GLGMHTDMS------CLTLVYQDEIGGLQMRSKEGEWIDIFPCENSLVVNVGDLMQAWSNGRLRSSEHRVVL-------- 250 (331)
Q Consensus 185 g~~~HtD~g------~lTlL~qd~~~GLqv~~~~g~W~~V~p~~g~~iVn~Gd~l~~~TnG~~~s~~HRV~~-------- 250 (331)
++++|.|-. .+|+-+-. ..-+.+..++|.+..+...+|.++|.-|+.=..|..|.-+-...-+-.
T Consensus 210 ~I~~H~D~~~~~~~~I~slSLG~-~~~f~f~~~~~~~~~l~L~~gsLlvM~G~~r~~w~H~I~~~~~d~~~~~~~~~~~~ 288 (345)
T 3tht_A 210 GIPAHIDTHSAFEDEIVSLSLGS-EIVMDFKHPDGIAVPVMLPRRSLLVMTGESRYLWTHGITCRKFDTVQASESLKSGI 288 (345)
T ss_dssp CEEEECCCTTTBCSCEEEEEESS-CEEEEEECTTSCEEEEEECTTEEEEECTHHHHTSEEEECCCSEEEEESGGGSSCEE
T ss_pred CEeeccCCchhcCCeEEEEECCC-ceeEEEccCCCceEEEEcCCCcEEEEChHHhhceEccCCcccCCccCccccccccc
Confidence 688899874 33333321 234666656678999999999999999999999977655443332210
Q ss_pred ----------CCCCceEEEEEeecCCC
Q 039710 251 ----------KRFINRLSLAFFWGFED 267 (331)
Q Consensus 251 ----------~~~~~R~Si~~F~~p~~ 267 (331)
.+...|+|+.|=.-++.
T Consensus 289 ~~~~~~~~~~~~r~~RiSlT~R~v~~~ 315 (345)
T 3tht_A 289 ITSDVGDLTLSKRGLRTSFTFRKVRQT 315 (345)
T ss_dssp CCSSSSCEEEEECCCEEEEEEECBCSS
T ss_pred ccccCCCceeccCCCEEEEEEEecCCC
Confidence 11357999999876654
No 14
>3s57_A Alpha-ketoglutarate-dependent dioxygenase ALKB HO; protein-DNA complex, jelly-roll fold, dioxygenase, dsDNA BIN plasma, oxidoreductase-DNA complex; HET: AKG; 1.60A {Homo sapiens} PDB: 3s5a_A* 3rzg_A 3rzl_A 3rzh_A* 3rzj_A* 3rzk_A* 3rzm_A 3bty_A* 3buc_A* 3h8r_A* 3h8o_A* 3h8x_A* 3btx_A* 3bu0_A* 3btz_A*
Probab=69.13 E-value=15 Score=30.54 Aligned_cols=43 Identities=14% Similarity=0.154 Sum_probs=32.1
Q ss_pred CeEEeccCCCeEEEEcchhhHHhhCCccccCccccccCCCCceEEEEEe
Q 039710 214 EWIDIFPCENSLVVNVGDLMQAWSNGRLRSSEHRVVLKRFINRLSLAFF 262 (331)
Q Consensus 214 ~W~~V~p~~g~~iVn~Gd~l~~~TnG~~~s~~HRV~~~~~~~R~Si~~F 262 (331)
....+...+|.++|.-|++=..|..+.-+... ....|+|+.|-
T Consensus 158 ~~~~~~L~~GsllvM~g~~q~~w~H~Ip~~~~------~~~~RislTFR 200 (204)
T 3s57_A 158 AVVRLPLAHGSLLMMNHPTNTHWYHSLPVRKK------VLAPRVNLTFR 200 (204)
T ss_dssp CCEEEEECTTEEEEEETTHHHHEEEEECCCTT------CCSCEEEEEEE
T ss_pred ceEEEECCCCCEEEECchhhheeEeeccccCC------CCCCEEEEEee
Confidence 57889999999999999987778754332111 24789999985
No 15
>2opi_A L-fuculose-1-phosphate aldolase; L-fuculose-1-phosphate aldolas structural genomics, PSI-2, protein structure initiative; 2.50A {Bacteroides thetaiotaomicron}
Probab=65.79 E-value=3.6 Score=34.63 Aligned_cols=36 Identities=31% Similarity=0.495 Sum_probs=32.1
Q ss_pred CCceEeCCCCCChhHHHHHHHHHhhcceEEEEcCCC
Q 039710 11 RLPVLDLSQPVSPSFLSSLSEACQEWGFFYVTNHGI 46 (331)
Q Consensus 11 ~lPvIDls~~~~~~~~~~l~~A~~~~Gff~l~nhgi 46 (331)
.||++++......++++.+.+++.+.-.+.|.|||+
T Consensus 125 ~v~~~~y~~~g~~~la~~i~~~l~~~~avll~nHG~ 160 (212)
T 2opi_A 125 EIPVIPYYRPGSPELAKAVVEAMLKHNSVLLTNHGQ 160 (212)
T ss_dssp CCCEECCCCTTCHHHHHHHHHHTSSCSEEEETTTEE
T ss_pred CeEEEcCCCCCcHHHHHHHHHHhccCCEEEEcCCCc
Confidence 699999987777788899999999989999999995
No 16
>1otj_A Alpha-ketoglutarate-dependent taurine dioxygenase; jelly roll motif, alpha ketoglutarate-dependent dioxygenase, oxidoreductase; 1.90A {Escherichia coli} SCOP: b.82.2.5 PDB: 1gqw_A* 1os7_A* 1gy9_A
Probab=62.20 E-value=6.2 Score=34.48 Aligned_cols=50 Identities=16% Similarity=0.353 Sum_probs=38.4
Q ss_pred CCCCceEeCCCCCChhHHHHHHHHHhhcceEEEEcCCCCHHHHHHHHHHHHHh
Q 039710 9 SVRLPVLDLSQPVSPSFLSSLSEACQEWGFFYVTNHGISQDMFKKVCSFSKRM 61 (331)
Q Consensus 9 ~~~lPvIDls~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~f 61 (331)
-++|+-|||+...+.+..++|.+++.++|++.+.+-.++.+ ...+.++.|
T Consensus 15 Gaei~gvdl~~~l~~~~~~~l~~~l~~~Gvv~frg~~~~~~---~~~~~~~~~ 64 (283)
T 1otj_A 15 GAQISGADLTRPLSDNQFEQLYHAVLRHQVVFLRDQAITPQ---QQRALAQRF 64 (283)
T ss_dssp CEEEESCCSSSCCCHHHHHHHHHHHHHHSEEEECSCCCCHH---HHHHHHHTT
T ss_pred eEEEECCCcCccCCHHHHHHHHHHHHHCCEEEECCCCCCHH---HHHHHHHHh
Confidence 34577789988667778999999999999999999887654 334455554
No 17
>2fk5_A Fuculose-1-phosphate aldolase; class II aldolase, metal binding, riken structural genomics/proteomics initiative, RSGI, NPPSFA; 1.90A {Thermus thermophilus} PDB: 2flf_A
Probab=60.98 E-value=8.1 Score=32.14 Aligned_cols=50 Identities=18% Similarity=0.245 Sum_probs=38.3
Q ss_pred CCceE-eCCCCCChhHHHHHHHHHhhcceEEEEcCCC---CH-----HHHHHHHHHHHH
Q 039710 11 RLPVL-DLSQPVSPSFLSSLSEACQEWGFFYVTNHGI---SQ-----DMFKKVCSFSKR 60 (331)
Q Consensus 11 ~lPvI-Dls~~~~~~~~~~l~~A~~~~Gff~l~nhgi---~~-----~~~~~~~~~~~~ 60 (331)
.||++ ++......++++.+.+++.+.-.+.|.|||+ .. +.+++++..+..
T Consensus 117 ~ip~~~~y~~~g~~ela~~i~~~l~~~~avll~nHG~~~~G~~~~~~~~~~eA~~~~~~ 175 (200)
T 2fk5_A 117 EVPVLAPKTVSATEEAALSVAEALREHRACLLRGHGAFAVGLKEAPEEALLEAYGLMTT 175 (200)
T ss_dssp CEEEECCSCCSSSHHHHHHHHHHHHHCSEEEETTTEEEEEECCSSHHHHHHHHHHHHHH
T ss_pred CceEecCCCCCCcHHHHHHHHHHhCcCCEEEECCCCcEEEeCCCCCcCcHHHHHHHHHH
Confidence 68999 8877777788899999999999999999995 20 455666555443
No 18
>3i3q_A Alpha-ketoglutarate-dependent dioxygenase ALKB; beta jellyroll, DNA damage, DNA repair, iron, M binding, oxidoreductase; HET: AKG; 1.40A {Escherichia coli} SCOP: b.82.2.10 PDB: 2fd8_A* 2fdg_A* 2fdh_A* 2fdf_A* 2fdj_A 2fdk_A* 2fdi_A* 3i2o_A* 3i3m_A* 3i49_A* 3t4h_B* 3t3y_A* 3t4v_A* 3o1t_A* 3o1o_A* 3o1m_A* 3o1r_A* 3o1s_A* 3o1p_A* 3o1u_A* ...
Probab=59.47 E-value=24 Score=29.53 Aligned_cols=69 Identities=16% Similarity=0.155 Sum_probs=43.6
Q ss_pred ccccccCC-----C--ceEEEeeCCCCceeEEc--cCCCeEEeccCCCeEEEEcchhhHHhhCCccccCccccccCC---
Q 039710 185 GLGMHTDM-----S--CLTLVYQDEIGGLQMRS--KEGEWIDIFPCENSLVVNVGDLMQAWSNGRLRSSEHRVVLKR--- 252 (331)
Q Consensus 185 g~~~HtD~-----g--~lTlL~qd~~~GLqv~~--~~g~W~~V~p~~g~~iVn~Gd~l~~~TnG~~~s~~HRV~~~~--- 252 (331)
++++|.|- + ++++-+.. ..-+.+.. +++....+...+|.++|.-|+.- .| .|.|....
T Consensus 117 ~i~~H~D~~e~~~~~pI~svSLG~-~~~f~f~~~~~~~~~~~i~L~~GsllvM~G~~r-~~--------~H~I~~~~~~~ 186 (211)
T 3i3q_A 117 KLSLHQDKDEPDLRAPIVSVSLGL-PAIFQFGGLKRNDPLKRLLLEHGDVVVWGGESR-LF--------YHGIQPLKAGF 186 (211)
T ss_dssp CEEEECCCCCSCTTSCEEEEEEES-CEEEEECCSSTTSCCEEEEECTTCEEEECGGGT-TC--------CEEECCCCCCC
T ss_pred CcccccCCCccccCCCEEEEECCC-CeEEEEecccCCCceEEEECCCCCEEEECchHH-ce--------EeccCcccCCc
Confidence 68899982 2 23443322 12344442 23678899999999999988762 23 36665432
Q ss_pred ----CCceEEEEEee
Q 039710 253 ----FINRLSLAFFW 263 (331)
Q Consensus 253 ----~~~R~Si~~F~ 263 (331)
...|+|+.|-.
T Consensus 187 ~p~~~~~RIsLTFR~ 201 (211)
T 3i3q_A 187 HPLTIDCRYNLTFRQ 201 (211)
T ss_dssp BTTTBTCEEEEEEEC
T ss_pred CCCCCCCEEEEEeee
Confidence 24699999864
No 19
>1e4c_P L-fuculose 1-phosphate aldolase; aldolase (class II), bacterial L-fucose metabolism; 1.66A {Escherichia coli} SCOP: c.74.1.1 PDB: 1fua_A 2fua_A 3fua_A 4fua_A* 1dzv_P 1e4b_P 1e47_P* 1e48_P* 1dzz_P 1e46_P 1dzu_P 1dzy_P 1dzx_P 1dzw_P 1e49_P 1e4a_P
Probab=58.91 E-value=5.5 Score=33.53 Aligned_cols=36 Identities=11% Similarity=0.165 Sum_probs=31.9
Q ss_pred CCceEeCCCCCChhHHHHHHHHHhhcceEEEEcCCC
Q 039710 11 RLPVLDLSQPVSPSFLSSLSEACQEWGFFYVTNHGI 46 (331)
Q Consensus 11 ~lPvIDls~~~~~~~~~~l~~A~~~~Gff~l~nhgi 46 (331)
.||++++......++++.+.+++.+.-.+.|.|||+
T Consensus 122 ~ip~~~y~~~g~~~la~~i~~~l~~~~avll~nHG~ 157 (215)
T 1e4c_P 122 SIPCAPYATFGTRELSEHVALALKNRKATLLQHHGL 157 (215)
T ss_dssp CBCEECCCCTTCHHHHHHHHHHTSSCSEEEETTTEE
T ss_pred CcceeeCCCCCcHHHHHHHHHHhccCCEEEEcCCCc
Confidence 689999987777788899999999989999999995
No 20
>1pvt_A Sugar-phosphate aldolase; structural genomics, PSI, protein initiative, midwest center for structural genomics, MCSG; 2.50A {Thermotoga maritima} SCOP: c.74.1.1
Probab=56.48 E-value=7.1 Score=33.40 Aligned_cols=37 Identities=16% Similarity=0.209 Sum_probs=32.4
Q ss_pred CCCceEeCCCCCChhHHHHHHHHHhhcceEEEEcCCC
Q 039710 10 VRLPVLDLSQPVSPSFLSSLSEACQEWGFFYVTNHGI 46 (331)
Q Consensus 10 ~~lPvIDls~~~~~~~~~~l~~A~~~~Gff~l~nhgi 46 (331)
..||++++......++++++.+++.+.-.+.+.|||+
T Consensus 160 ~~v~~~~y~~~g~~ela~~i~~~l~~~~avll~nHG~ 196 (238)
T 1pvt_A 160 QGISVVEFEKPGSVELGLKTVEKSEGKDAVLWDKHGV 196 (238)
T ss_dssp SCCEEECCCSTTCHHHHHHHHHHTSSCSEEEETTSCE
T ss_pred CCceEecCCCCCcHHHHHHHHHHhccCCEEEEcCCCc
Confidence 4699999987777788899999999999999999995
No 21
>1oih_A Putative alkylsulfatase ATSK; non-heme Fe(II) alphaketoglutarate dependent dioxygenase, jelly roll, oxidoreductase; 1.89A {Pseudomonas putida} SCOP: b.82.2.5 PDB: 1oii_A* 1oij_B* 1vz4_A 1vz5_A 1oik_A* 1oij_A* 1oij_C*
Probab=55.92 E-value=9.5 Score=33.67 Aligned_cols=51 Identities=10% Similarity=0.181 Sum_probs=38.8
Q ss_pred CCCceEeCCCCCChhHHHHHHHHHhhcceEEEEcCC-CCHHHHHHHHHHHHHhcC
Q 039710 10 VRLPVLDLSQPVSPSFLSSLSEACQEWGFFYVTNHG-ISQDMFKKVCSFSKRMFS 63 (331)
Q Consensus 10 ~~lPvIDls~~~~~~~~~~l~~A~~~~Gff~l~nhg-i~~~~~~~~~~~~~~fF~ 63 (331)
++|+-|||+...+.+..++|.+++.++|++.+.+-. ++. ++..+.++.|=.
T Consensus 26 aei~gvdl~~~l~~~~~~~l~~~l~~~Gvv~fRg~~~l~~---~~~~~~~~~fG~ 77 (301)
T 1oih_A 26 AEIRGVKLSPDLDAATVEAIQAALVRHKVIFFRGQTHLDD---QSQEGFAKLLGE 77 (301)
T ss_dssp EEEESCCCCTTCCHHHHHHHHHHHHHHSEEEECCCTTCCH---HHHHHHHHTTSC
T ss_pred eEEeCCCccccCCHHHHHHHHHHHHHCCEEEECCCCCCCH---HHHHHHHHHhCC
Confidence 446667888865777889999999999999999888 875 445555665543
No 22
>3o2g_A Gamma-butyrobetaine dioxygenase; gamma-butyrobetaine hydroxylase, 2-OXOG dioxygenase 1, oxidoreductase, structural genomics; HET: OGA NM2; 1.78A {Homo sapiens} PDB: 3ms5_A* 3n6w_A
Probab=54.28 E-value=6.7 Score=36.26 Aligned_cols=51 Identities=20% Similarity=0.209 Sum_probs=40.2
Q ss_pred CCceEeCCCCC-ChhHHHHHHHHHhhcceEEEEcCCCCHHHHHHHHHHHHHhcCC
Q 039710 11 RLPVLDLSQPV-SPSFLSSLSEACQEWGFFYVTNHGISQDMFKKVCSFSKRMFSS 64 (331)
Q Consensus 11 ~lPvIDls~~~-~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~l 64 (331)
++|.||++.+. +.+.+.++.+++.++|++.+.|-.++.+ ...+.++.|=.+
T Consensus 122 ~~~~~~~~~~l~~d~~~~~~~~~l~~~Gvv~frg~~~~~~---~~~~~a~~~G~l 173 (388)
T 3o2g_A 122 QLPTLDFEDVLRYDEHAYKWLSTLKKVGIVRLTGASDKPG---EVSKLGKRMGFL 173 (388)
T ss_dssp CCCEEEHHHHHHCHHHHHHHHHHHHHHSEEEEECCCSSTT---HHHHHHHHHSCC
T ss_pred CCCccCHHHHhcCHHHHHHHHHHHHhcCEEEEeCCCCCHH---HHHHHHHHhCCC
Confidence 68999998764 5678899999999999999999988754 344556666444
No 23
>3r1j_A Alpha-ketoglutarate-dependent taurine dioxygenase; ssgcid, oxidoreductase, structural genomics; 2.05A {Mycobacterium avium} SCOP: b.82.2.0 PDB: 3swt_A
Probab=52.81 E-value=13 Score=33.13 Aligned_cols=52 Identities=8% Similarity=0.192 Sum_probs=39.7
Q ss_pred CCCceEeCCCCCChhHHHHHHHHHhhcceEEEEcC-CCCHHHHHHHHHHHHHhcCC
Q 039710 10 VRLPVLDLSQPVSPSFLSSLSEACQEWGFFYVTNH-GISQDMFKKVCSFSKRMFSS 64 (331)
Q Consensus 10 ~~lPvIDls~~~~~~~~~~l~~A~~~~Gff~l~nh-gi~~~~~~~~~~~~~~fF~l 64 (331)
++|+=|||+...+.+..++|.+|+.++|.+.+.|- .++.+ +..+.++.|=.+
T Consensus 20 aei~gvdl~~~L~d~~~~~l~~al~~~gvv~fR~q~~l~~~---~~~~fa~~fG~l 72 (301)
T 3r1j_A 20 ARVDGVRLGGDLDDATVEQIRRALLTHKVIFFRHQHHLDDS---RQLEFARLLGTP 72 (301)
T ss_dssp EEEESCCCSTTCCHHHHHHHHHHHHHHSEEEECCCTTCCHH---HHHHHHHHHSCB
T ss_pred ceEeCCCccccCCHHHHHHHHHHHHHCCEEEECCCCCCCHH---HHHHHHHhcCCc
Confidence 56777899865577889999999999999999998 77764 444566666433
No 24
>2dbn_A Hypothetical protein YBIU; alpha/beta structure, structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Escherichia coli} PDB: 2dbi_A 2csg_A*
Probab=51.16 E-value=5.5 Score=37.58 Aligned_cols=54 Identities=11% Similarity=0.079 Sum_probs=40.1
Q ss_pred CCCCceEeCCCCCChhHHHHHHHHHhhcceEEEEcCCCCHHHHHHHHHHHHHhcC
Q 039710 9 SVRLPVLDLSQPVSPSFLSSLSEACQEWGFFYVTNHGISQDMFKKVCSFSKRMFS 63 (331)
Q Consensus 9 ~~~lPvIDls~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~ 63 (331)
+.-||.||++++.+....+...+.+++.||+.|.|. ||.+......+...+|.+
T Consensus 98 ~~~iP~i~f~di~~~~~s~~~~~~ir~rG~vVIRgv-vp~e~A~~~~~~~~~yl~ 151 (461)
T 2dbn_A 98 DAVWPVLSYADIKAGHVTAEQREQIKRRGCAVIKGH-FPREQALGWDQSMLDYLD 151 (461)
T ss_dssp CCSSCEEEHHHHHHTCCCHHHHHHHHHHSEEEEETS-SCHHHHHHHHHHHHHHHH
T ss_pred CCCcceecHHHhcCCCCCHHHHHHHHhccEEEECCC-CCHHHHHHHHHHHHHHHH
Confidence 456999999876443344667788999999988654 688877777777777764
No 25
>2v9l_A Rhamnulose-1-phosphate aldolase; entropy index, metal-binding, oligomerization, zinc, lyase, class II, cytoplasm; HET: PGO; 1.23A {Escherichia coli} PDB: 2uyv_A* 1ojr_A 2v9g_A* 1gt7_A* 2v9n_A* 2uyu_A* 2v9m_A* 2v9o_A 2v9e_A 2v9f_A 2v9i_A 2v29_A 2v2a_A* 2v2b_A
Probab=49.55 E-value=7.7 Score=34.01 Aligned_cols=36 Identities=14% Similarity=0.209 Sum_probs=32.2
Q ss_pred CCceEeCCCCCChhHHHHHHHHHhhcceEEEEcCCC
Q 039710 11 RLPVLDLSQPVSPSFLSSLSEACQEWGFFYVTNHGI 46 (331)
Q Consensus 11 ~lPvIDls~~~~~~~~~~l~~A~~~~Gff~l~nhgi 46 (331)
.||++++....+.++++++.+++.+.-.+.+.|||+
T Consensus 179 ~v~v~~y~~~g~~ela~~i~~~l~~~~avll~nHG~ 214 (274)
T 2v9l_A 179 GVGILPWMVPGTDAIGQATAQEMQKHSLVLWPFHGV 214 (274)
T ss_dssp CEEECCCCCSSSHHHHHHHHHHHTTCSEEEETTTEE
T ss_pred ceeEecCCCCCCHHHHHHHHHHHccCCEEEEcCCCc
Confidence 699999987777788999999999999999999995
No 26
>3pvj_A Alpha-ketoglutarate-dependent taurine dioxygenase; jelly roll motif, Fe(II) binding, oxidoreductas; 1.85A {Pseudomonas putida KT2440} SCOP: b.82.2.5 PDB: 3v15_A 3v17_A*
Probab=48.10 E-value=13 Score=32.57 Aligned_cols=50 Identities=14% Similarity=0.346 Sum_probs=39.1
Q ss_pred CCCCceEeCCCCCChhHHHHHHHHHhhcceEEEEcCCCCHHHHHHHHHHHHHh
Q 039710 9 SVRLPVLDLSQPVSPSFLSSLSEACQEWGFFYVTNHGISQDMFKKVCSFSKRM 61 (331)
Q Consensus 9 ~~~lPvIDls~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~f 61 (331)
-++|.=|||+...+.+..++|.+++.++|.+.+.|-.++.+ +..+.++.|
T Consensus 13 Gaei~gvdl~~~l~~~~~~~l~~~l~~~gvv~fR~q~l~~~---~~~~fa~~f 62 (277)
T 3pvj_A 13 GAQISGVDISRDISAEERDAIEQALLQHQVLFLRDQPINPE---QQARFAARF 62 (277)
T ss_dssp CEEEESCCTTSCCCHHHHHHHHHHHHHHSEEEESSCCCCHH---HHHHHHGGG
T ss_pred eEEEeCCCccccCCHHHHHHHHHHHHHCCEEEECCCCCCHH---HHHHHHHHh
Confidence 35677789998667788999999999999999999988754 334455555
No 27
>3ocr_A Class II aldolase/adducin domain protein; PSI-2, midwest center for structural genomics, protein struc initiative, MCSG, lyase; 1.95A {Pseudomonas syringae PV}
Probab=42.39 E-value=13 Score=32.50 Aligned_cols=50 Identities=12% Similarity=0.021 Sum_probs=36.9
Q ss_pred CCCceEeCCCCC-ChhHHHHHHHHHhhcceEEEEcCCCC--HHHHHHHHHHHH
Q 039710 10 VRLPVLDLSQPV-SPSFLSSLSEACQEWGFFYVTNHGIS--QDMFKKVCSFSK 59 (331)
Q Consensus 10 ~~lPvIDls~~~-~~~~~~~l~~A~~~~Gff~l~nhgi~--~~~~~~~~~~~~ 59 (331)
..||++|+..+. +.++.+++.+++.+.-.+.|.|||+= -+.+++++..+.
T Consensus 155 g~v~~~~y~~~~~~~el~~~i~~~l~~~~avlL~nHG~~~~G~tl~eA~~~~~ 207 (273)
T 3ocr_A 155 GRVAYHGYEGIALDLSERERLVADLGDKSVMILRNHGLLTGGVSVEHAIQQLH 207 (273)
T ss_dssp TTEEEECCCCSSCCHHHHHHHHHHHTTCSEEEETTTEEEEEESSHHHHHHHHH
T ss_pred CCEEEECCCCCCCCHHHHHHHHHHhCcCCEEEEcCCceEEecCCHHHHHHHHH
Confidence 368999998765 66788999999999999999999952 223444444433
No 28
>3kt7_A PKHD-type hydroxylase TPA1; double-stranded beta helix fold, dioxygenase, iron, mRNP complex, prolyl hydroxylase; HET: AKG; 1.77A {Saccharomyces cerevisiae} PDB: 3kt1_A 3kt4_A 3mgu_A
Probab=34.85 E-value=72 Score=31.27 Aligned_cols=69 Identities=22% Similarity=0.174 Sum_probs=43.5
Q ss_pred cccccCC-C--ceEEEee----C------CCCceeEEccC-------CCeEEeccCCCeEEEEcchhhHHhhC-CccccC
Q 039710 186 LGMHTDM-S--CLTLVYQ----D------EIGGLQMRSKE-------GEWIDIFPCENSLVVNVGDLMQAWSN-GRLRSS 244 (331)
Q Consensus 186 ~~~HtD~-g--~lTlL~q----d------~~~GLqv~~~~-------g~W~~V~p~~g~~iVn~Gd~l~~~Tn-G~~~s~ 244 (331)
...|.|. + .||+++. + ..|-|++++.+ .....|.|..|.+++..- . + .+
T Consensus 137 L~~H~D~~~~RrvS~VLYLN~pd~~W~~e~GGeL~Lyd~d~~~~P~~d~~~~I~P~fNrLV~F~v-------sp~---~S 206 (633)
T 3kt7_A 137 LLTHDDVIGSRRISFILYLPDPDRKWKSHYGGGLRLFPSILPNVPHSDPSAKLVPQFNQIAFFKV-------LPG---FS 206 (633)
T ss_dssp EEEECCCCTTEEEEEEEECSCTTSCCCGGGBCCEEECCEEETTEECSSCSEEECCCTTEEEEEEC-------CTT---TC
T ss_pred eeecCCCCCCeEEEEEEEcCCCCCCCCccCCceEEEecCCCcCCCCCCceEEEecCCCeEEEEEc-------CCC---CC
Confidence 5778884 2 3566552 1 12448888644 246789999999998642 1 1 24
Q ss_pred ccccccC-CCCceEEEEEeec
Q 039710 245 EHRVVLK-RFINRLSLAFFWG 264 (331)
Q Consensus 245 ~HRV~~~-~~~~R~Si~~F~~ 264 (331)
.|.|... .+..|+||+-.++
T Consensus 207 ~H~V~eV~~~~~RlSItGWF~ 227 (633)
T 3kt7_A 207 FHDXEEVKVDKHRLSIQGWYH 227 (633)
T ss_dssp CEEECCBCSSCCEEEEEEEEE
T ss_pred cCCCCccCCCCCEEEEEEEec
Confidence 6755331 1789999976655
No 29
>3ghf_A Septum site-determining protein MINC; structural genomics, cell division, cell cycle, septation, PSI-2, protein structure initiative; HET: CIT; 2.20A {Salmonella typhimurium LT2}
Probab=34.24 E-value=31 Score=26.02 Aligned_cols=36 Identities=19% Similarity=0.226 Sum_probs=27.1
Q ss_pred eEeCCCCCChhHHHHHHHHHhhcceEEEEcCCCCHH
Q 039710 14 VLDLSQPVSPSFLSSLSEACQEWGFFYVTNHGISQD 49 (331)
Q Consensus 14 vIDls~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~ 49 (331)
|||++.+........|.+.|+++|+.-+--.|.+.+
T Consensus 51 VlDl~~l~~~~dl~~L~~~l~~~gl~~vGV~g~~~~ 86 (120)
T 3ghf_A 51 VINVSGLESPVNWPELHKIVTSTGLRIIGVSGCKDA 86 (120)
T ss_dssp EEEEEECCSSCCHHHHHHHHHTTTCEEEEEESCCCH
T ss_pred EEEccccCChHHHHHHHHHHHHcCCEEEEEeCCCcH
Confidence 678887753334788999999999999877775543
No 30
>2irp_A Putative aldolase class 2 protein AQ_1979; aldehyde, enzymatic mechanism; 2.40A {Aquifex aeolicus}
Probab=33.69 E-value=15 Score=30.48 Aligned_cols=48 Identities=10% Similarity=0.235 Sum_probs=32.6
Q ss_pred CCceEeCCCCCChhHHHHHHHHHhhcc---eEEEEcCCCC--HHHHHHHHHHHH
Q 039710 11 RLPVLDLSQPVSPSFLSSLSEACQEWG---FFYVTNHGIS--QDMFKKVCSFSK 59 (331)
Q Consensus 11 ~lPvIDls~~~~~~~~~~l~~A~~~~G---ff~l~nhgi~--~~~~~~~~~~~~ 59 (331)
.||++++. ...+++++.+.+++.+.+ .+.|.|||+= -+.+++++..+.
T Consensus 139 ~vp~~~~~-~g~~~La~~i~~~l~~~~~~~avll~nHG~~~~G~~~~eA~~~~~ 191 (208)
T 2irp_A 139 KIPIFPNE-QNIPLLAKEVENYFKTSEDKYGFLIRGHGLYTWGRSMEEALIHTE 191 (208)
T ss_dssp EEEEECCC-SCHHHHHHHHHHHHHHCSCCSCEEETTTEEEEEESSHHHHHHHHH
T ss_pred ceeeecCC-CCHHHHHHHHHHHHhcCCCceEEEEcCCCCeEecCCHHHHHHHHH
Confidence 68888875 444567888889998875 7999999952 123444444433
No 31
>3eat_X Pyoverdine biosynthesis protein PVCB; paerucumarin, Fe/alpha-ketoglutarate dependent hydroxylase, 2-isocyano-6,7-dihydroxycoumarin; 2.50A {Pseudomonas aeruginosa}
Probab=32.63 E-value=28 Score=30.57 Aligned_cols=49 Identities=6% Similarity=0.005 Sum_probs=35.2
Q ss_pred CceEeCCCCCChhHHHHHHHHHhhcceEEEEcCC-C-CHHHHHHHHHHHHHhcC
Q 039710 12 LPVLDLSQPVSPSFLSSLSEACQEWGFFYVTNHG-I-SQDMFKKVCSFSKRMFS 63 (331)
Q Consensus 12 lPvIDls~~~~~~~~~~l~~A~~~~Gff~l~nhg-i-~~~~~~~~~~~~~~fF~ 63 (331)
|.=||++...+.+..++|.+++.++|++.+.+-. + +. ++..+.++.|=.
T Consensus 31 I~gvdl~~~l~~~~~~~L~~~l~~~gvv~fRgq~~l~~~---~~~~~~a~~fG~ 81 (293)
T 3eat_X 31 LEPGRPGMHVGELPAQWLKGLARSHHLLLLRGFAAFADA---ESLTRYCHDFGE 81 (293)
T ss_dssp EEESSTTCBGGGSCHHHHHHHHHHHSEEEECSCBCCSSH---HHHHHHHHHHSC
T ss_pred EECCCCCcCcCHHHHHHHHHHHHHhCEEEECCCCCCCCH---HHHHHHHHHhCC
Confidence 4446777544566789999999999999999886 5 44 344566666643
No 32
>1m5a_B Insulin B chain; alpha helices, beta sheets, 3(10) helices, disulphide bridge hormone-growth factor complex; 1.20A {Sus scrofa} SCOP: g.1.1.1 PDB: 1aph_B 1b18_B 1b19_B 1b2a_B 1b2b_B 1b2c_B 1b2d_B 1b2e_B 1b2f_B 1b2g_B 1bph_B 1cph_B 1dph_B 1b17_B 1mpj_B 1wav_B 1zni_B 2a3g_B 2bn1_B 2bn3_B ...
Probab=30.05 E-value=51 Score=18.42 Aligned_cols=19 Identities=37% Similarity=0.800 Sum_probs=15.7
Q ss_pred hhHHHHHHHHHhhcceEEE
Q 039710 23 PSFLSSLSEACQEWGFFYV 41 (331)
Q Consensus 23 ~~~~~~l~~A~~~~Gff~l 41 (331)
..+.+.+.-.|.+-||||-
T Consensus 9 s~LVdaL~~vCgdRGF~~~ 27 (30)
T 1m5a_B 9 SHLVEALYLVCGERGFFYT 27 (30)
T ss_dssp HHHHHHHHHHHGGGCEEEC
T ss_pred HHHHHHHHHHhccCccccC
Confidence 3567888889999999984
No 33
>1nx8_A CARC, carbapenem synthase; jelly roll, unknown function; HET: AKG N7P; 2.30A {Pectobacterium carotovorum} SCOP: b.82.2.8 PDB: 1nx4_A*
Probab=29.29 E-value=19 Score=31.06 Aligned_cols=45 Identities=16% Similarity=0.191 Sum_probs=32.3
Q ss_pred CCCceEeCCCCCChhHHHHHHHHHhhcceEEEEcCCCCHHHHHHHHHHHHHh
Q 039710 10 VRLPVLDLSQPVSPSFLSSLSEACQEWGFFYVTNHGISQDMFKKVCSFSKRM 61 (331)
Q Consensus 10 ~~lPvIDls~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~f 61 (331)
++|+=||++++ + .++|.+++.++|++.+.+-.++.+ +..+.++.|
T Consensus 17 a~i~g~dl~~~-~---~~~l~~~l~~~G~v~~rg~~~~~~---~~~~~~~~~ 61 (273)
T 1nx8_A 17 AYIDHRDFLEA-K---TETIKNLLMRQGFVVVKNLDIDSD---TFRDIYSAY 61 (273)
T ss_dssp EEECHHHHHHS-C---HHHHHHHHHHHCEEEECSCCCCHH---HHHHHHHTT
T ss_pred EEEECCCcccC-C---HHHHHHHHHHCCEEEECCCCCCHH---HHHHHHHHh
Confidence 34555777776 4 889999999999999998887653 333444444
No 34
>2z7b_A MLR6791 protein; class II aldolase superfamily, lyase; 1.90A {Mesorhizobium loti}
Probab=25.16 E-value=37 Score=29.51 Aligned_cols=36 Identities=19% Similarity=0.421 Sum_probs=29.1
Q ss_pred CCceEeCCC---------CCChhHHHHHHHHHhhcceEEEEcCCC
Q 039710 11 RLPVLDLSQ---------PVSPSFLSSLSEACQEWGFFYVTNHGI 46 (331)
Q Consensus 11 ~lPvIDls~---------~~~~~~~~~l~~A~~~~Gff~l~nhgi 46 (331)
.||++++.. ..+.++.+++.+++.+.-.+.|.|||+
T Consensus 157 ~vpv~~y~~~~g~~~~~~~~s~ela~~ia~~l~~~~avLL~nHG~ 201 (270)
T 2z7b_A 157 SVPVYEIRDKHGDETDLFGGSPDVCADIAESLGSQTVVLMARHGV 201 (270)
T ss_dssp CCCEECTHHHHCSCSCCCCCSHHHHHHHHHHHTTSSEEEETTTEE
T ss_pred CCceecccccCCcccccccCCHHHHHHHHHHhccCCEEEEcCCce
Confidence 689998641 225678899999999999999999995
No 35
>2ld7_A Histone deacetylase complex subunit SAP30; transcription; NMR {Mus musculus}
Probab=24.17 E-value=1.4e+02 Score=21.45 Aligned_cols=58 Identities=19% Similarity=0.253 Sum_probs=37.9
Q ss_pred CCCCCCCceEeCCCCCChhHHHHHHHHHhhcceEEEEcCCCCHHHHHHHHHHH-HHhcCCCHHHHhhc
Q 039710 6 LQISVRLPVLDLSQPVSPSFLSSLSEACQEWGFFYVTNHGISQDMFKKVCSFS-KRMFSSPTDTKLKL 72 (331)
Q Consensus 6 ~~~~~~lPvIDls~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~-~~fF~lp~e~K~~~ 72 (331)
.+.....|-|||+.+. ...|++-++.++. =+..+++.+ ++.... +.|=++|..|+.-+
T Consensus 13 ~~~~~~~p~vdf~kL~----~~tLrrY~r~y~L--~~~~~~sK~---qLa~aV~kHF~s~~VdE~evI 71 (94)
T 2ld7_A 13 PVQDIDTPEVDLYQLQ----VNTLRRYKRHFKL--PTRPGLNKA---QLVEIVGCHFKSIPVNEKDTL 71 (94)
T ss_dssp CSCSSCCCCCCCSSSC----HHHHHHHHHHTTC--CCCSSCCHH---HHHHHHHHHHTTCCCCHHHHH
T ss_pred CcccCCCCCcCHHHCC----HHHHHHHHHHhCC--CCCCCCCHH---HHHHHHHHHHHcCCCCHHHHH
Confidence 3445678999999985 4677888888876 244456553 333333 45556888777665
No 36
>3m4r_A Uncharacterized protein; short chain dehydrogenase, class II aldolase, adducin head D carbohydrate metabolism, structural genomics; 2.00A {Thermoplasma acidophilum}
Probab=23.80 E-value=25 Score=29.62 Aligned_cols=34 Identities=15% Similarity=0.209 Sum_probs=27.9
Q ss_pred CceEeCCCCCChhHHHHHHHHHhhc-ceEEEEcCCC
Q 039710 12 LPVLDLSQPVSPSFLSSLSEACQEW-GFFYVTNHGI 46 (331)
Q Consensus 12 lPvIDls~~~~~~~~~~l~~A~~~~-Gff~l~nhgi 46 (331)
+|++++..... ++.+++.+++.+. -.+.|.|||+
T Consensus 156 v~~~~y~~~g~-ela~~i~~~l~~~~~avlL~nHG~ 190 (222)
T 3m4r_A 156 VVVLPYIPPGF-TLAKEVMNCFKKGIDGIVLRKHGL 190 (222)
T ss_dssp EEEECCCCSSH-HHHHHHHHHCCTTCSEEEETTTEE
T ss_pred ceecCCcCCcH-HHHHHHHHHHhcCCCEEEECCCCC
Confidence 88899877655 7888999999865 7788999995
No 37
>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}
Probab=21.34 E-value=1.1e+02 Score=26.92 Aligned_cols=38 Identities=3% Similarity=0.054 Sum_probs=22.5
Q ss_pred HHHHHHHHHhhcceEEEEcCCCCHHHHHHHHHHHHHhc
Q 039710 25 FLSSLSEACQEWGFFYVTNHGISQDMFKKVCSFSKRMF 62 (331)
Q Consensus 25 ~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF 62 (331)
..++|.++|++.++|+--|..+.-.++.++.+.+-++|
T Consensus 126 ~~~~L~~aa~~~~~~~a~N~SiGv~ll~~l~~~aa~~l 163 (288)
T 3ijp_A 126 EEAQIADFAKYTTIVKSGNMSLGVNLLANLVKRAAKAL 163 (288)
T ss_dssp HHHHHHHHHTTSEEEECSCCCHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHhCcCCEEEECCCcHHHHHHHHHHHHHHHhc
Confidence 34556666666666666666655555555555555554
No 38
>4ay7_A Methylcobalamin\: coenzyme M methyltransferase; TIM barrel; 1.80A {Methanosarcina mazei} PDB: 4ay8_A
Probab=21.05 E-value=1.5e+02 Score=26.43 Aligned_cols=40 Identities=13% Similarity=0.115 Sum_probs=31.8
Q ss_pred hHHHHHHHHHhhcceEEEEcCCCC----HHHHHHHHHHHHHhcC
Q 039710 24 SFLSSLSEACQEWGFFYVTNHGIS----QDMFKKVCSFSKRMFS 63 (331)
Q Consensus 24 ~~~~~l~~A~~~~Gff~l~nhgi~----~~~~~~~~~~~~~fF~ 63 (331)
+..+++.+.+..-||+.=.+|||+ .+-+..+.+++++|++
T Consensus 305 ~i~~~v~~~l~~~g~I~~~Ghgi~p~tp~env~a~v~av~ey~A 348 (348)
T 4ay7_A 305 KIKAEAKEALEGGIDVLAPGCGIAPMTPLENVKALVAARDEFYA 348 (348)
T ss_dssp HHHHHHHHHHHTTCSEEEESSSCCTTCCHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHhCCCCEEeCCCccCCCCCHHHHHHHHHHHHHhcC
Confidence 345667778888888877899975 4778999999999975
No 39
>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=21.00 E-value=1e+02 Score=26.63 Aligned_cols=38 Identities=16% Similarity=0.303 Sum_probs=23.2
Q ss_pred HHHHHHHHHhhcceEEEEcCCCCHHHHHHHHHHHHHhc
Q 039710 25 FLSSLSEACQEWGFFYVTNHGISQDMFKKVCSFSKRMF 62 (331)
Q Consensus 25 ~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF 62 (331)
..++|.++|++.+.++--|..+.-.++.++.+.+.++|
T Consensus 111 ~~~~L~~aa~~~~vv~a~N~s~Gv~l~~~~~~~aa~~l 148 (272)
T 4f3y_A 111 QKAQLRAAGEKIALVFSANMSVGVNVTMKLLEFAAKQF 148 (272)
T ss_dssp HHHHHHHHTTTSEEEECSCCCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHhccCCEEEECCCCHHHHHHHHHHHHHHHhc
Confidence 45566666666666666666665556655555555554
No 40
>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}
Probab=20.72 E-value=1e+02 Score=26.26 Aligned_cols=39 Identities=18% Similarity=0.315 Sum_probs=32.3
Q ss_pred hHHHHHHHHHhhcceEEEEcCCCCHHHHHHHHHHHHHhc
Q 039710 24 SFLSSLSEACQEWGFFYVTNHGISQDMFKKVCSFSKRMF 62 (331)
Q Consensus 24 ~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF 62 (331)
+..++|.++|++.+.++--|..+.-.++.++.+.+-++|
T Consensus 89 e~~~~l~~aa~~~~v~~a~N~S~Gv~l~~~~~~~aa~~l 127 (243)
T 3qy9_A 89 KLLNKLDELSQNMPVFFSANMSYGVHALTKILAAAVPLL 127 (243)
T ss_dssp HHHHHHHHHTTTSEEEECSSCCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhcCCEEEECCccHHHHHHHHHHHHHHHhc
Confidence 467889999999999998898888888888877777666
Done!