BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 039712
(211 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P29136|MEP1_SOYBN Metalloendoproteinase 1 OS=Glycine max PE=1 SV=2
Length = 305
Score = 129 bits (323), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 86/230 (37%), Positives = 113/230 (49%), Gaps = 24/230 (10%)
Query: 1 ELLESTIKTCQLNFNLKSTGFLDANTVAKMRTPRCGVADIVNGTTRMRSGKKKQQQNNHF 60
+ L S IKT Q N+NL TG D NT+ ++ TPRCGV DI+ T + S F
Sbjct: 79 DTLVSAIKTYQKNYNLNVTGKFDINTLKQIMTPRCGVPDIIINTNKTTSFGMISDY-TFF 137
Query: 61 HTVSQWPASKFSLTYAFRLGTRGDAI--TPVARAFQTWAANTQFRFSKIEDFAGADIKIS 118
+ +W A LTYAF R D + +ARAF W F + + A+IKI
Sbjct: 138 KDMPRWQAGTTQLTYAFSPEPRLDDTFKSAIARAFSKWTPVVNIAFQETTSYETANIKIL 197
Query: 119 FESRNHGDGRPFDGRGGPDGTLAHAFAPTNGRFHYDADEPWAVGA------VQGAFDSLK 172
F S+NHGD PFD GP G L HAFAPT+GR H+DADE W V AFD L+
Sbjct: 198 FASKNHGDPYPFD---GPGGILGHAFAPTDGRCHFDADEYWVASGDVTKSPVTSAFD-LE 253
Query: 173 DTYI--IAPSTAVQNAPCTATVLWRS---------LQGDDIQGIKALYNV 211
+ I + ++ +++ S L DDI GI+ LY +
Sbjct: 254 SVAVHEIGHLLGLGHSSDLRAIMYPSIPPRTRKVNLAQDDIDGIRKLYGI 303
>sp|P08253|MMP2_HUMAN 72 kDa type IV collagenase OS=Homo sapiens GN=MMP2 PE=1 SV=2
Length = 660
Score = 101 bits (252), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/167 (41%), Positives = 84/167 (50%), Gaps = 19/167 (11%)
Query: 2 LLESTIKTCQLNFNLKSTGFLDANTVAKMRTPRCGVADIVNGTTRMRSGKKKQQQNNHFH 61
+L+ T+K Q F L TG LD NT+ MR PRCG D+ N R K K +N +
Sbjct: 69 VLKDTLKKMQKFFGLPQTGDLDQNTIETMRKPRCGNPDVANYNFFPR--KPKWDKNQITY 126
Query: 62 TVSQWPASKFSLTYAFRLGTRGDAITPVARAFQTWAANTQFRFSKIEDFAGADIKISFES 121
+ T T DA ARAFQ W+ T RFS+I D ADI I+F
Sbjct: 127 RI-------IGYTPDLDPETVDDAF---ARAFQVWSDVTPLRFSRIHD-GEADIMINFGR 175
Query: 122 RNHGDGRPFDGRGGPDGTLAHAFAP---TNGRFHYDADEPWAVGAVQ 165
HGDG PFDG+ DG LAHAFAP G H+D DE W +G Q
Sbjct: 176 WEHGDGYPFDGK---DGLLAHAFAPGTGVGGDSHFDDDELWTLGEGQ 219
>sp|P50757|MMP2_RABIT 72 kDa type IV collagenase OS=Oryctolagus cuniculus GN=MMP2 PE=2
SV=1
Length = 662
Score = 99.8 bits (247), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/167 (41%), Positives = 84/167 (50%), Gaps = 19/167 (11%)
Query: 2 LLESTIKTCQLNFNLKSTGFLDANTVAKMRTPRCGVADIVNGTTRMRSGKKKQQQNNHFH 61
+L+ T+K Q F L TG LD +T+ MR PRCG D+ N R K K +N +
Sbjct: 69 VLKDTLKKMQKFFGLPQTGELDQSTIETMRKPRCGNPDVANYNFFPR--KPKWDKNQITY 126
Query: 62 TVSQWPASKFSLTYAFRLGTRGDAITPVARAFQTWAANTQFRFSKIEDFAGADIKISFES 121
+ T T DA ARAFQ W+ T RFS+I D ADI I+F
Sbjct: 127 RI-------IGYTPDLDPETVDDAF---ARAFQVWSNVTPLRFSRIHD-GEADIMINFGR 175
Query: 122 RNHGDGRPFDGRGGPDGTLAHAFAP---TNGRFHYDADEPWAVGAVQ 165
HGDG PFDG+ DG LAHAFAP G H+D DE W +G Q
Sbjct: 176 WEHGDGYPFDGK---DGLLAHAFAPGTGVGGDSHFDDDELWTLGEGQ 219
>sp|P91953|HE_HEMPU 50 kDa hatching enzyme OS=Hemicentrotus pulcherrimus PE=1 SV=1
Length = 591
Score = 99.0 bits (245), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/220 (32%), Positives = 100/220 (45%), Gaps = 37/220 (16%)
Query: 5 STIKTCQLNFNLKSTGFLDANTVAKMRTPRCGVADIVNGTTRMRSGKKKQQQNNHFHTVS 64
S I Q N + TG LDA T A + TPRCGV DI+ T +
Sbjct: 132 SAILEYQQNGGINQTGILDAETAALLDTPRCGVPDILPYVTGGIA--------------- 176
Query: 65 QWPASKFSLTYAFRLGTRGDAITPVA------RAFQTWAANTQFRFSKIEDFAGADIKIS 118
WP ++TY+F GT + ++ A RAFQ W + F ++ D + DI+I
Sbjct: 177 -WP-RNVAVTYSF--GTLSNDLSQTAIKNELRRAFQVWDDVSSLTFREVVDSSSVDIRIK 232
Query: 119 FESRNHGDGRPFDGRGGPDGTLAHAFAPTNGRFHYDADEPWAVGAVQGAFDSLKDTYIIA 178
F S HGDG FDG+G G LAHAF P NG H+D E W +G G +
Sbjct: 233 FGSYEHGDGISFDGQG---GVLAHAFLPRNGDAHFDDSERWTIGTNSGTNLFQVAAHEFG 289
Query: 179 PSTAVQNAPCTATVLWRSLQG---------DDIQGIKALY 209
S + ++ + +++ +G DDI GI +LY
Sbjct: 290 HSLGLYHSDVQSALMYPYYRGYNPNFNLDRDDIAGITSLY 329
>sp|P57748|MMP20_MOUSE Matrix metalloproteinase-20 OS=Mus musculus GN=Mmp20 PE=2 SV=1
Length = 482
Score = 99.0 bits (245), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/222 (32%), Positives = 103/222 (46%), Gaps = 42/222 (18%)
Query: 7 IKTCQLNFNLKSTGFLDANTVAKMRTPRCGVADIVNGTTRMRSGKKKQQQNNHFHTVSQW 66
IK Q+ F LK TG LD NT+ ++ PRCGV D+ N R+ G+ K ++N + +S++
Sbjct: 71 IKELQIFFGLKVTGKLDQNTMNVIKKPRCGVPDVAN--YRLFPGEPKWKKNILTYRISKY 128
Query: 67 PASKFSLTYAFRLGTRGDAITPVARAFQTWAANTQFRFSKIEDFAGADIKISFESRNHGD 126
S + + + A W+ F +I ADI ISFE+ +HGD
Sbjct: 129 TPSM----------SPTEVDKAIQMALHAWSTAVPLNFVRINS-GEADIMISFETGDHGD 177
Query: 127 GRPFDGRGGPDGTLAHAFAP---TNGRFHYDADEPWAVGA---------------VQGAF 168
PFD GP GTLAHAFAP G H+D E W +G G
Sbjct: 178 SYPFD---GPRGTLAHAFAPGEGLGGDTHFDNAEKWTMGTNGFNLFTVAAHEFGHALGLG 234
Query: 169 DSLKDTYIIAPSTAVQNAPCTATVLWR-SLQGDDIQGIKALY 209
S + ++ P+ QN +R L DD++GI+ALY
Sbjct: 235 HSTDPSALMYPTYKYQNP-------YRFHLPKDDVKGIQALY 269
>sp|Q90611|MMP2_CHICK 72 kDa type IV collagenase OS=Gallus gallus GN=MMP2 PE=1 SV=1
Length = 663
Score = 99.0 bits (245), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/167 (40%), Positives = 86/167 (51%), Gaps = 19/167 (11%)
Query: 2 LLESTIKTCQLNFNLKSTGFLDANTVAKMRTPRCGVADIVNGTTRMRSGKKKQQQNNHFH 61
+L+ T+K Q F L TG LD NT+ M+ PRCG D+ N R K K ++N+ +
Sbjct: 66 VLKDTLKKMQKFFGLPETGDLDQNTIETMKKPRCGNPDVANYNFFPR--KPKWEKNHITY 123
Query: 62 TVSQWPASKFSLTYAFRLGTRGDAITPVARAFQTWAANTQFRFSKIEDFAGADIKISFES 121
+ T T DA ARAF+ W+ T RF++I D ADI I+F
Sbjct: 124 RI-------IGYTPDLDPETVDDAF---ARAFKVWSDVTPLRFNRIND-GEADIMINFGR 172
Query: 122 RNHGDGRPFDGRGGPDGTLAHAFAP---TNGRFHYDADEPWAVGAVQ 165
HGDG PFDG+ DG LAHAFAP G H+D DE W +G Q
Sbjct: 173 WEHGDGYPFDGK---DGLLAHAFAPGPGIGGDSHFDDDELWTLGEGQ 216
>sp|P33436|MMP2_RAT 72 kDa type IV collagenase OS=Rattus norvegicus GN=Mmp2 PE=2 SV=2
Length = 662
Score = 98.2 bits (243), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/167 (40%), Positives = 83/167 (49%), Gaps = 19/167 (11%)
Query: 2 LLESTIKTCQLNFNLKSTGFLDANTVAKMRTPRCGVADIVNGTTRMRSGKKKQQQNNHFH 61
+L+ T+K Q F L TG LD NT+ MR PRCG D+ N R K K +N +
Sbjct: 69 VLKDTLKKMQKFFGLPQTGDLDQNTIETMRKPRCGNPDVANYNFFPR--KPKWDKNQITY 126
Query: 62 TVSQWPASKFSLTYAFRLGTRGDAITPVARAFQTWAANTQFRFSKIEDFAGADIKISFES 121
+ T T DA ARA + W+ T RFS+I D ADI I+F
Sbjct: 127 RI-------IGYTPDLDPETVDDAF---ARALKVWSDVTPLRFSRIHD-GEADIMINFGR 175
Query: 122 RNHGDGRPFDGRGGPDGTLAHAFAP---TNGRFHYDADEPWAVGAVQ 165
HGDG PFDG+ DG LAHAFAP G H+D DE W +G Q
Sbjct: 176 WEHGDGYPFDGK---DGLLAHAFAPGTGVGGDSHFDDDELWTLGEGQ 219
>sp|P22757|HE_PARLI Hatching enzyme OS=Paracentrotus lividus PE=1 SV=1
Length = 587
Score = 98.2 bits (243), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 97/218 (44%), Gaps = 33/218 (15%)
Query: 5 STIKTCQLNFNLKSTGFLDANTVAKMRTPRCGVADIVNGTTRMRSGKKKQQQNNHFHTVS 64
S I Q + + TG LDA+T + TPRCGV D++ T + + Q
Sbjct: 129 SAILDFQEHGGINQTGILDADTAELLSTPRCGVPDVLPFVTSSITWSRNQ---------- 178
Query: 65 QWPASKFSLTYAFRLGT----RGDAITPVARAFQTWAANTQFRFSKIEDFAGADIKISFE 120
+TY+F T + D + RAF+ W + F ++ D DI+I F
Sbjct: 179 -------PVTYSFGALTSDLNQNDVKDEIRRAFRVWDDVSGLSFREVPDTTSVDIRIKFG 231
Query: 121 SRNHGDGRPFDGRGGPDGTLAHAFAPTNGRFHYDADEPWAVGAVQGAFDSLKDTYIIAPS 180
S +HGDG FDGRG G LAHAF P NG H+D E W G G + S
Sbjct: 232 SYDHGDGISFDGRG---GVLAHAFLPRNGDAHFDDSETWTEGTRSGTNLFQVAAHEFGHS 288
Query: 181 TAVQNAPCTATVLWRSLQG---------DDIQGIKALY 209
+ ++ + +++ QG DDI GI++LY
Sbjct: 289 LGLYHSTVRSALMYPYYQGYVPNFRLDNDDIAGIRSLY 326
>sp|P33434|MMP2_MOUSE 72 kDa type IV collagenase OS=Mus musculus GN=Mmp2 PE=2 SV=1
Length = 662
Score = 98.2 bits (243), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 68/167 (40%), Positives = 83/167 (49%), Gaps = 19/167 (11%)
Query: 2 LLESTIKTCQLNFNLKSTGFLDANTVAKMRTPRCGVADIVNGTTRMRSGKKKQQQNNHFH 61
+L+ T+K Q F L TG LD NT+ MR PRCG D+ N R K K +N +
Sbjct: 69 VLKDTLKKMQKFFGLPQTGDLDQNTIETMRKPRCGNPDVANYNFFPR--KPKWDKNQITY 126
Query: 62 TVSQWPASKFSLTYAFRLGTRGDAITPVARAFQTWAANTQFRFSKIEDFAGADIKISFES 121
+ T T DA ARA + W+ T RFS+I D ADI I+F
Sbjct: 127 RI-------IGYTPDLDPETVDDAF---ARALKVWSDVTPLRFSRIHD-GEADIMINFGR 175
Query: 122 RNHGDGRPFDGRGGPDGTLAHAFAP---TNGRFHYDADEPWAVGAVQ 165
HGDG PFDG+ DG LAHAFAP G H+D DE W +G Q
Sbjct: 176 WEHGDGYPFDGK---DGLLAHAFAPGTGVGGDSHFDDDELWTLGEGQ 219
>sp|O60882|MMP20_HUMAN Matrix metalloproteinase-20 OS=Homo sapiens GN=MMP20 PE=1 SV=3
Length = 483
Score = 97.4 bits (241), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 72/215 (33%), Positives = 100/215 (46%), Gaps = 28/215 (13%)
Query: 7 IKTCQLNFNLKSTGFLDANTVAKMRTPRCGVADIVNGTTRMRSGKKKQQQNNHFHTVSQW 66
IK Q F L+ TG LD T+ ++ PRCGV D+ N R+ G+ K ++N + +S++
Sbjct: 72 IKELQAFFGLQVTGKLDQTTMNVIKKPRCGVPDVAN--YRLFPGEPKWKKNTLTYRISKY 129
Query: 67 PASKFSLTYAFRLGTRGDAITPVARAFQTWAANTQFRFSKIEDFAGADIKISFESRNHGD 126
S S+ + V A Q W++ F +I ADI ISFE+ +HGD
Sbjct: 130 TPSMSSV----------EVDKAVEMALQAWSSAVPLSFVRINS-GEADIMISFENGDHGD 178
Query: 127 GRPFDGRGGPDGTLAHAFAP---TNGRFHYDADEPWAVG---------AVQGAFDSLKDT 174
PFD GP GTLAHAFAP G H+D E W +G A +L
Sbjct: 179 SYPFD---GPRGTLAHAFAPGEGLGGDTHFDNAEKWTMGTNGFNLFTVAAHEFGHALGLA 235
Query: 175 YIIAPSTAVQNAPCTATVLWRSLQGDDIQGIKALY 209
+ PS + L DD++GI+ALY
Sbjct: 236 HSTDPSALMYPTYKYKNPYGFHLPKDDVKGIQALY 270
>sp|P79287|MMP20_PIG Matrix metalloproteinase-20 OS=Sus scrofa GN=MMP20 PE=2 SV=1
Length = 483
Score = 97.1 bits (240), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 73/222 (32%), Positives = 103/222 (46%), Gaps = 42/222 (18%)
Query: 7 IKTCQLNFNLKSTGFLDANTVAKMRTPRCGVADIVNGTTRMRSGKKKQQQNNHFHTVSQW 66
IK Q F L+ TG LD T+ ++ PRCGV D+ N R+ G+ K ++N + +S++
Sbjct: 72 IKELQAFFGLRVTGKLDRTTMDVIKRPRCGVPDVAN--YRLFPGEPKWKKNTLTYRISKY 129
Query: 67 PASKFSLTYAFRLGTRGDAITPVARAFQTWAANTQFRFSKIEDFAG-ADIKISFESRNHG 125
S T + + A Q W++ F ++ AG ADI ISFE+ +HG
Sbjct: 130 TPSM----------TPAEVDKAMEMALQAWSSAVPLSFVRVN--AGEADIMISFETGDHG 177
Query: 126 DGRPFDGRGGPDGTLAHAFAP---TNGRFHYDADEPWAVGA---------------VQGA 167
D PFD GP GTLAHAFAP G H+D E W +G G
Sbjct: 178 DSYPFD---GPRGTLAHAFAPGEGLGGDTHFDNAEKWTMGMNGFNLFTVAAHEFGHALGL 234
Query: 168 FDSLKDTYIIAPSTAVQNAPCTATVLWRSLQGDDIQGIKALY 209
S + ++ P+ QN L DD++GI+ALY
Sbjct: 235 AHSTDPSALMYPTYKYQNP------YGFHLPKDDVKGIQALY 270
>sp|Q9GLE5|MMP2_BOVIN 72 kDa type IV collagenase OS=Bos taurus GN=MMP2 PE=2 SV=1
Length = 661
Score = 94.7 bits (234), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 68/167 (40%), Positives = 83/167 (49%), Gaps = 19/167 (11%)
Query: 2 LLESTIKTCQLNFNLKSTGFLDANTVAKMRTPRCGVADIVNGTTRMRSGKKKQQQNNHFH 61
+L+ T+K Q F L TG LD +T+ MR PRCG D+ N R K K +N +
Sbjct: 70 VLKDTLKKMQKFFGLPQTGELDQSTIETMRKPRCGNPDVANYNFFPR--KPKWDKNQITY 127
Query: 62 TVSQWPASKFSLTYAFRLGTRGDAITPVARAFQTWAANTQFRFSKIEDFAGADIKISFES 121
+ T T DA ARAFQ W+ T RFS+I D ADI I+F
Sbjct: 128 RI-------IGYTPDLDPQTVDDAF---ARAFQVWSDVTPLRFSRIHD-GEADIMINFGR 176
Query: 122 RNHGDGRPFDGRGGPDGTLAHAFAP---TNGRFHYDADEPWAVGAVQ 165
HGDG PFDG+ DG LAHAFAP G H+D DE +G Q
Sbjct: 177 WEHGDGYPFDGK---DGLLAHAFAPGPGVGGDSHFDDDELRTLGEGQ 220
>sp|O18767|MMP20_BOVIN Matrix metalloproteinase-20 OS=Bos taurus GN=MMP20 PE=1 SV=1
Length = 481
Score = 94.4 bits (233), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 71/221 (32%), Positives = 102/221 (46%), Gaps = 40/221 (18%)
Query: 7 IKTCQLNFNLKSTGFLDANTVAKMRTPRCGVADIVNGTTRMRSGKKKQQQNNHFHTVSQW 66
IK Q F L+ TG LD T+ ++ PRCGV D+ N R+ G+ K ++N + +S++
Sbjct: 70 IKELQEFFGLRVTGKLDRATMDVIKRPRCGVPDVAN--YRLFPGEPKWKKNTLTYRISKY 127
Query: 67 PASKFSLTYAFRLGTRGDAITPVARAFQTWAANTQFRFSKIEDFAGADIKISFESRNHGD 126
S T + + A + W++ F +I + ADI ISFE+ +HGD
Sbjct: 128 TPSM----------TPAEVDRAMEMALRAWSSAVPLNFVRI-NAGEADIMISFETGDHGD 176
Query: 127 GRPFDGRGGPDGTLAHAFAP---TNGRFHYDADEPWAVGA---------------VQGAF 168
PFD GP GTLAHAFAP G H+D E W +G G
Sbjct: 177 SYPFD---GPRGTLAHAFAPGEGLGGDTHFDNAEKWTMGTNGFNLFTVAAHEFGHALGLA 233
Query: 169 DSLKDTYIIAPSTAVQNAPCTATVLWRSLQGDDIQGIKALY 209
S + ++ P+ QN L DD++GI+ALY
Sbjct: 234 HSTDPSALMFPTYKYQNP------YGFRLPKDDVKGIQALY 268
>sp|O70138|MMP8_MOUSE Neutrophil collagenase OS=Mus musculus GN=Mmp8 PE=2 SV=2
Length = 465
Score = 90.9 bits (224), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 71/227 (31%), Positives = 101/227 (44%), Gaps = 42/227 (18%)
Query: 2 LLESTIKTCQLNFNLKSTGFLDANTVAKMRTPRCGVADIVNGTTRMRSGKKKQQQNN-HF 60
++ +K Q F+L TG LDA T+ M PRCGV D +G + G K N +
Sbjct: 58 MVAEKLKEMQRFFSLAETGKLDAATMGIMEMPRCGVPD--SGDFLLTPGSPKWTHTNLTY 115
Query: 61 HTVSQWPASKFSLTYAFRLGTRGDAITPVARAFQTWAANTQFRFSKIEDFAGADIKISFE 120
++ P +R + T + +AF W+ + F++I ADI I+F
Sbjct: 116 RIINHTPQL-----------SRAEVKTAIEKAFHVWSVASPLTFTEILQ-GEADINIAFV 163
Query: 121 SRNHGDGRPFDGRGGPDGTLAHAFAP---TNGRFHYDADEPWA---------------VG 162
SR+HGD PFD GP+G LAHAF P G H+D++E W G
Sbjct: 164 SRDHGDNSPFD---GPNGILAHAFQPGQGIGGDAHFDSEETWTQDSKNYNLFLVAAHEFG 220
Query: 163 AVQGAFDSLKDTYIIAPSTAVQNAPCTATVLWRSLQGDDIQGIKALY 209
G S ++ P+ A + P T SL DDI GI+ +Y
Sbjct: 221 HSLGLSHSTDPGALMYPNYAYRE-PSTY-----SLPQDDINGIQTIY 261
>sp|P03957|MMP3_RAT Stromelysin-1 OS=Rattus norvegicus GN=Mmp3 PE=1 SV=1
Length = 475
Score = 90.9 bits (224), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 74/222 (33%), Positives = 99/222 (44%), Gaps = 41/222 (18%)
Query: 7 IKTCQLNFNLKSTGFLDANTVAKMRTPRCGVADIVNGTTRMRSGKKKQQQNNHFHTVSQW 66
I+ Q LK TG LD+NT+ M PRCGV D+ G G K ++N+ + +
Sbjct: 62 IQEMQKFLGLKMTGKLDSNTMELMHKPRCGVPDV--GGFSTFPGSPKWRKNHISYRI--- 116
Query: 67 PASKFSLTYAFRLGTRGDAITPVARAFQTWAANTQFRFSKIEDFAGADIKISFESRNHGD 126
+ Y L R + + RA + W T FS+I + ADI ISF HGD
Sbjct: 117 ------VNYTLDL-PRESVDSAIERALKVWEEVTPLTFSRISE-GEADIMISFAVEEHGD 168
Query: 127 GRPFDGRGGPDGTLAHAFAP---TNGRFHYDADEPWA---------------VGAVQGAF 168
PFD GP LAHA+AP TNG H+D DE W +G G F
Sbjct: 169 FIPFD---GPGMVLAHAYAPGPGTNGDAHFDDDERWTDDVTGTNLFLVAAHELGHSLGLF 225
Query: 169 DSLKDTYIIAPSTAVQNAPCTATVLWR-SLQGDDIQGIKALY 209
S ++ P ++T L R L DD+ GI++LY
Sbjct: 226 HSANAEALMYPVYK------SSTDLARFHLSQDDVDGIQSLY 261
>sp|P08254|MMP3_HUMAN Stromelysin-1 OS=Homo sapiens GN=MMP3 PE=1 SV=2
Length = 477
Score = 88.2 bits (217), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 76/227 (33%), Positives = 98/227 (43%), Gaps = 51/227 (22%)
Query: 7 IKTCQLNFNLKSTGFLDANTVAKMRTPRCGVADIVNGTTRMRSGKKKQQQNNHFHTVSQW 66
I+ Q L+ TG LD++T+ MR PRCGV D+ HF T
Sbjct: 64 IREMQKFLGLEVTGKLDSDTLEVMRKPRCGVPDV-----------------GHFRTFPGI 106
Query: 67 PA-SKFSLTYA---FRLGTRGDAI-TPVARAFQTWAANTQFRFSKIEDFAGADIKISFES 121
P K LTY + DA+ + V +A + W T FS++ + ADI ISF
Sbjct: 107 PKWRKTHLTYRIVNYTPDLPKDAVDSAVEKALKVWEEVTPLTFSRLYE-GEADIMISFAV 165
Query: 122 RNHGDGRPFDGRGGPDGTLAHAFAP---TNGRFHYDADEPWA---------------VGA 163
R HGD PFD GP LAHA+AP NG H+D DE W +G
Sbjct: 166 REHGDFYPFD---GPGNVLAHAYAPGPGINGDAHFDDDEQWTKDTTGTNLFLVAAHEIGH 222
Query: 164 VQGAFDSLKDTYIIAPSTAVQNAPCTATVLWR-SLQGDDIQGIKALY 209
G F S ++ P + T L R L DDI GI++LY
Sbjct: 223 SLGLFHSANTEALMYPLYH------SLTDLTRFRLSQDDINGIQSLY 263
>sp|Q6Y4Q5|MMP3_CANFA Stromelysin-1 OS=Canis familiaris GN=MMP3 PE=2 SV=1
Length = 478
Score = 87.8 bits (216), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 71/225 (31%), Positives = 99/225 (44%), Gaps = 47/225 (20%)
Query: 7 IKTCQLNFNLKSTGFLDANTVAKMRTPRCGVADIVNGTTRMRSGKKKQQQNNHFHTVSQW 66
I+ Q L+ TG +D++T+A MR PRCGV D+ + TT F + +W
Sbjct: 64 IREMQKFLGLEVTGKVDSDTLAMMRRPRCGVPDVGDFTT--------------FPGMPKW 109
Query: 67 PASKFSLTYAFRLGT----RGDAITPVARAFQTWAANTQFRFSKIEDFAGADIKISFESR 122
K LTY T R + + +A W T FS+ ++ ADIKISF R
Sbjct: 110 --RKTHLTYRIMNYTPDLPRDAVDSAIEKALNVWKEVTPLTFSRTDE-GEADIKISFAVR 166
Query: 123 NHGDGRPFDGRGGPDGTLAHAFAPTNGRF---HYDADEPWA---------------VGAV 164
+HGD PFD GP L HA+ P G + H+D DE W +G
Sbjct: 167 DHGDFNPFD---GPGNVLGHAYPPGPGIYGDAHFDDDEQWTSDTSGTNLFLVAAHELGHS 223
Query: 165 QGAFDSLKDTYIIAPSTAVQNAPCTATVLWRSLQGDDIQGIKALY 209
G F S + ++ P V A + L DD+ GI++LY
Sbjct: 224 LGLFHSADPSALMYPVYNV-----LADLARFHLSQDDVNGIQSLY 263
>sp|O55123|MMP10_MOUSE Stromelysin-2 OS=Mus musculus GN=Mmp10 PE=2 SV=1
Length = 476
Score = 87.4 bits (215), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 95/221 (42%), Gaps = 39/221 (17%)
Query: 7 IKTCQLNFNLKSTGFLDANTVAKMRTPRCGVADIVNGTTRMRSGKKKQQQNNHFHTVSQW 66
I+ Q L+ TG LD+NT+ M PRCGV D V G + K ++ + + V+
Sbjct: 64 IQEMQKFLGLEMTGKLDSNTMELMHKPRCGVPD-VGGFSTFPGSPKWRKSHITYRIVNYT 122
Query: 67 PASKFSLTYAFRLGTRGDAITPVARAFQTWAANTQFRFSKIEDFAGADIKISFESRNHGD 126
P R + + +A + W T FS+I + ADI ISF HGD
Sbjct: 123 PDL-----------PRQSVDSAIEKALKVWEEVTPLTFSRISE-GEADIMISFAVGEHGD 170
Query: 127 GRPFDGRGGPDGTLAHAFAPTNGRF---HYDADEPWA---------------VGAVQGAF 168
PFD GP +LAHA+ P G + H+D DE W +G G F
Sbjct: 171 FYPFD---GPGQSLAHAYPPGPGFYGDVHFDDDEKWTLAPSGTNLFLVAAHELGHSLGLF 227
Query: 169 DSLKDTYIIAPSTAVQNAPCTATVLWRSLQGDDIQGIKALY 209
S K ++ P +P L DDI+GI++LY
Sbjct: 228 HSDKKESLMYPVYRFSTSPANF-----HLSQDDIEGIQSLY 263
>sp|O62806|MMP13_RABIT Collagenase 3 OS=Oryctolagus cuniculus GN=MMP13 PE=2 SV=1
Length = 471
Score = 87.4 bits (215), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 99/216 (45%), Gaps = 30/216 (13%)
Query: 7 IKTCQLNFNLKSTGFLDANTVAKMRTPRCGVADIVNGTTRMRSGKKKQQQNNHFHTVSQW 66
++ Q F L+ TG LD NT+A M+ PRCGV D+ R+ K Q N + V+
Sbjct: 68 LREMQSFFGLEVTGKLDDNTLAIMKQPRCGVPDVGEYNVFPRT-LKWSQTNLTYRIVNYT 126
Query: 67 PASKFSLTYAFRLGTRGDAITPVARAFQTWAANTQFRFSKIEDFAGADIKISFESRNHGD 126
P T + +AF+ W+ T F++I + ADI ISF ++ HGD
Sbjct: 127 PDL-----------THSEVEKAFKKAFKVWSDVTPLNFTRIHN-GTADIMISFGTKEHGD 174
Query: 127 GRPFDGRGGPDGTLAHAFAP---TNGRFHYDADEPWAVGAVQGAFDSLKDTYIIAPSTAV 183
PFD GP G LAHAF P G H+D DE W + +G L + S +
Sbjct: 175 FYPFD---GPSGLLAHAFPPGPNYGGDAHFDDDETW-TSSSKGYNLFLVAAHEFGHSLGL 230
Query: 184 QNAPCTATVLWR----------SLQGDDIQGIKALY 209
++ +++ L DD+QGI++LY
Sbjct: 231 DHSKDPGALMFPIYTYTGKSHFMLPDDDVQGIQSLY 266
>sp|P50282|MMP9_RAT Matrix metalloproteinase-9 OS=Rattus norvegicus GN=Mmp9 PE=2 SV=1
Length = 708
Score = 87.0 bits (214), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 61/163 (37%), Positives = 79/163 (48%), Gaps = 19/163 (11%)
Query: 3 LESTIKTCQLNFNLKSTGFLDANTVAKMRTPRCGVADIVNGTTRMRSGKKKQQQNNHFHT 62
L + Q +L TG LD+ T+ +R+PRCGV D+ G + G K H H
Sbjct: 68 LRPALLMLQKQLSLPQTGELDSETLKAIRSPRCGVPDV--GKFQTFDGDLKW----HHHN 121
Query: 63 VSQWPASKFSLTYAFRLGTRGDAITPVARAFQTWAANTQFRFSKIEDFAGADIKISFESR 122
++ W S Y L R ARAF W+A T F+++ ADI I F
Sbjct: 122 ITYWIQS-----YTEDL-PRDVIDDSFARAFAVWSAVTPLTFTRVYGLE-ADIVIQFGVA 174
Query: 123 NHGDGRPFDGRGGPDGTLAHAFAP---TNGRFHYDADEPWAVG 162
HGDG PFDG+ DG LAHAF P G H+D DE W++G
Sbjct: 175 EHGDGYPFDGK---DGLLAHAFPPGPGIQGDAHFDDDELWSLG 214
>sp|P07152|MMP10_RAT Stromelysin-2 OS=Rattus norvegicus GN=Mmp10 PE=2 SV=1
Length = 476
Score = 87.0 bits (214), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 96/221 (43%), Gaps = 39/221 (17%)
Query: 7 IKTCQLNFNLKSTGFLDANTVAKMRTPRCGVADIVNGTTRMRSGKKKQQQNNHFHTVSQW 66
I+ Q L+ TG LD+NTV M PRCGV D+ G G K ++N+ + +
Sbjct: 64 IEEMQKFLGLEMTGKLDSNTVEMMHKPRCGVPDV--GGFSTFPGSPKWRKNHISYRI--- 118
Query: 67 PASKFSLTYAFRLGTRGDAITPVARAFQTWAANTQFRFSKIEDFAGADIKISFESRNHGD 126
+ Y L R + + RA + W T FS+I + ADI ISF HGD
Sbjct: 119 ------VNYTLDL-PRESVDSAIERALKVWEEVTPLTFSRISE-GEADIMISFAVGEHGD 170
Query: 127 GRPFDGRGGPDGTLAHAFAPTNGRF---HYDADEPWAVGAV---------------QGAF 168
PFDG G +LAHA+ P G + H+D DE W++G G F
Sbjct: 171 FYPFDGVGQ---SLAHAYPPGPGFYGDAHFDDDEKWSLGPSGTNLFLVAAHELGHSLGLF 227
Query: 169 DSLKDTYIIAPSTAVQNAPCTATVLWRSLQGDDIQGIKALY 209
S ++ P + L DDI+GI++LY
Sbjct: 228 HSNNKESLMYPVYRFSTSQANI-----RLSQDDIEGIQSLY 263
>sp|P39900|MMP12_HUMAN Macrophage metalloelastase OS=Homo sapiens GN=MMP12 PE=1 SV=1
Length = 470
Score = 86.7 bits (213), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/226 (31%), Positives = 99/226 (43%), Gaps = 40/226 (17%)
Query: 2 LLESTIKTCQLNFNLKSTGFLDANTVAKMRTPRCGVADIVNGTTRMRSGKKKQQQNNHFH 61
L++ I+ Q LK TG LD +T+ M PRCGV D+ +HF
Sbjct: 59 LMKEKIQEMQHFLGLKVTGQLDTSTLEMMHAPRCGVPDV-----------------HHFR 101
Query: 62 TVSQWPA-SKFSLTYAFRLGT----RGDAITPVARAFQTWAANTQFRFSKIEDFAGADIK 116
+ P K +TY T R D + +AFQ W+ T +FSKI ADI
Sbjct: 102 EMPGGPVWRKHYITYRINNYTPDMNREDVDYAIRKAFQVWSNVTPLKFSKINT-GMADIL 160
Query: 117 ISFESRNHGDGRPFDGRGGPDGTLAHAFAP---TNGRFHYDADEPWAVGAVQGAFDSLKD 173
+ F HGD FDG+G G LAHAF P G H+D DE W + G L
Sbjct: 161 VVFARGAHGDFHAFDGKG---GILAHAFGPGSGIGGDAHFDEDEFWTTHS-GGTNLFLTA 216
Query: 174 TYIIAPSTAVQNAPCTATVLWRS----------LQGDDIQGIKALY 209
+ I S + ++ V++ + L DDI+GI++LY
Sbjct: 217 VHEIGHSLGLGHSSDPKAVMFPTYKYVDINTFRLSADDIRGIQSLY 262
>sp|P79227|MMP12_RABIT Macrophage metalloelastase OS=Oryctolagus cuniculus GN=MMP12 PE=2
SV=1
Length = 464
Score = 86.7 bits (213), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 100/226 (44%), Gaps = 40/226 (17%)
Query: 2 LLESTIKTCQLNFNLKSTGFLDANTVAKMRTPRCGVADIVNGTTRMRSGKKKQQQNNHFH 61
+E ++ Q L TG LD +T+ M PRCGV D+ HF
Sbjct: 54 FIEEKVQEMQQFLGLNVTGQLDTSTLEMMHKPRCGVPDVY-----------------HFK 96
Query: 62 TVSQWPA-SKFSLTYAFRLGT----RGDAITPVARAFQTWAANTQFRFSKIEDFAGADIK 116
T+ P K +TY + T R D + +AFQ W+ T +F KI ADI
Sbjct: 97 TMPGRPVWRKHYITYRIKNYTPDMKREDVEYAIQKAFQVWSDVTPLKFRKITT-GKADIM 155
Query: 117 ISFESRNHGDGRPFDGRGGPDGTLAHAFAP---TNGRFHYDADEPWAVGAVQGAFDSLKD 173
I F S HGD FDGRG G +AHAF P G H+D DE W+ + +G L
Sbjct: 156 ILFASGAHGDYGAFDGRG---GVIAHAFGPGPGIGGDTHFDEDEIWS-KSYKGTNLFLVA 211
Query: 174 TYIIAPSTAVQNAPCTATVLWRS----------LQGDDIQGIKALY 209
+ + + + ++ +++ + L DDI+GI++LY
Sbjct: 212 VHELGHALGLDHSNDPKAIMFPTYGYIDLNTFHLSADDIRGIQSLY 257
>sp|O88766|MMP8_RAT Neutrophil collagenase OS=Rattus norvegicus GN=Mmp8 PE=2 SV=1
Length = 466
Score = 86.3 bits (212), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 100/227 (44%), Gaps = 42/227 (18%)
Query: 2 LLESTIKTCQLNFNLKSTGFLDANTVAKMRTPRCGVADIVNGTTRMRSGKKKQQQNN-HF 60
++ +K Q F L TG DA T+ M PRCGV D +G + G K N +
Sbjct: 59 MIAEKLKEMQRFFGLPETGKPDAATIEIMEKPRCGVPD--SGDFLLTPGSPKWTHTNLTY 116
Query: 61 HTVSQWPASKFSLTYAFRLGTRGDAITPVARAFQTWAANTQFRFSKIEDFAGADIKISFE 120
++ P ++ + T + +AF+ W+ + F++ + ADI I+F
Sbjct: 117 RIINHTPQM-----------SKAEVKTEIEKAFKIWSVPSTLTFTETLE-GEADINIAFV 164
Query: 121 SRNHGDGRPFDGRGGPDGTLAHAFAP---TNGRFHYDADEPWA---------------VG 162
SR+HGD PFD GP+G LAHAF P G H+D++E W G
Sbjct: 165 SRDHGDNSPFD---GPNGILAHAFQPGRGIGGDAHFDSEETWTQDSKNYNLFLVAAHEFG 221
Query: 163 AVQGAFDSLKDTYIIAPSTAVQNAPCTATVLWRSLQGDDIQGIKALY 209
G S ++ P+ A + P T SL DDI GI+ +Y
Sbjct: 222 HSLGLSHSTDPGALMYPNYAYRE-PSTY-----SLPQDDINGIQTIY 262
>sp|Q63341|MMP12_RAT Macrophage metalloelastase OS=Rattus norvegicus GN=Mmp12 PE=2 SV=1
Length = 465
Score = 86.3 bits (212), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/225 (32%), Positives = 103/225 (45%), Gaps = 38/225 (16%)
Query: 2 LLESTIKTCQLNFNLKSTGFLDANTVAKMRTPRCGVADIVNGTTRMRSGKKKQQQNNHFH 61
LLE ++ Q F L+ TG LD +T+ M T RCGV D+ +R+ ++
Sbjct: 55 LLEEKLQEMQQFFGLEVTGQLDTSTLKIMHTSRCGVPDV----QHLRAVPQR-------- 102
Query: 62 TVSQWPASKFSLTYAFRLGT----RGDAITPVARAFQTWAANTQFRFSKIEDFAGADIKI 117
S+W K LTY T R D +AFQ W+ T RF KI ADI I
Sbjct: 103 --SRW--MKRYLTYRIYNYTPDMKRADVDYIFQKAFQVWSDVTPLRFRKIHK-GEADITI 157
Query: 118 SFESRNHGDGRPFDGRGGPDGTLAHAFAP---TNGRFHYDADEPWAVGAVQGAFDSLKDT 174
F +HGD FDG+G GTLAHAF P G H+D E W + QG L
Sbjct: 158 LFAFGDHGDFYDFDGKG---GTLAHAFYPGPGIQGDAHFDEAETWT-KSFQGTNLFLVAV 213
Query: 175 YIIAPSTAVQNAPCTATVLWRS----------LQGDDIQGIKALY 209
+ + S ++++ ++++ + L DDI I++LY
Sbjct: 214 HELGHSLGLRHSNNPKSIMYPTYRYLHPNTFRLSADDIHSIQSLY 258
>sp|O13065|MMP18_XENLA Matrix metalloproteinase-18 OS=Xenopus laevis GN=mmp18 PE=2 SV=1
Length = 467
Score = 86.3 bits (212), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/160 (38%), Positives = 78/160 (48%), Gaps = 27/160 (16%)
Query: 7 IKTCQLNFNLKSTGFLDANTVAKMRTPRCGVADIVNGTTRMRSGKKKQQQNNHFHTVSQW 66
++ Q F LK TG LD TV M PRCGV D+ +T +S S W
Sbjct: 64 LEQMQKFFGLKVTGTLDPKTVEVMEKPRCGVYDVGQYSTVAKS--------------SAW 109
Query: 67 PASKFSLTYAFRLGT----RGDAITPVARAFQTWAANTQFRFSKIEDFAGADIKISFESR 122
K LTY T + D T + RAF+ W+ T F++I + +DI+ISF +
Sbjct: 110 --QKKDLTYRILNFTPDLPQADVETAIQRAFKVWSDVTPLTFTRIYN-EVSDIEISFTAG 166
Query: 123 NHGDGRPFDGRGGPDGTLAHAFAPTN---GRFHYDADEPW 159
+H D PFDG G G LAHAF P N G H+D DE W
Sbjct: 167 DHKDNSPFDGSG---GILAHAFQPGNGIGGDAHFDEDETW 203
>sp|P45452|MMP13_HUMAN Collagenase 3 OS=Homo sapiens GN=MMP13 PE=1 SV=1
Length = 471
Score = 85.9 bits (211), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 99/220 (45%), Gaps = 38/220 (17%)
Query: 7 IKTCQLNFNLKSTGFLDANTVAKMRTPRCGVADIVNGTTRMRSGKKKQQQNNHFHTVSQW 66
++ Q F L+ TG LD NT+ M+ PRCGV D+ + N F +W
Sbjct: 68 LREMQSFFGLEVTGKLDDNTLDVMKKPRCGVPDV--------------GEYNVFPRTLKW 113
Query: 67 PASKFSLTYAF----RLGTRGDAITPVARAFQTWAANTQFRFSKIEDFAGADIKISFESR 122
SK +LTY T + +AF+ W+ T F+++ D ADI ISF +
Sbjct: 114 --SKMNLTYRIVNYTPDMTHSEVEKAFKKAFKVWSDVTPLNFTRLHD-GIADIMISFGIK 170
Query: 123 NHGDGRPFDGRGGPDGTLAHAFAP---TNGRFHYDADEPWAVGAVQGAFDSLKDTYIIAP 179
HGD PFD GP G LAHAF P G H+D DE W + +G L +
Sbjct: 171 EHGDFYPFD---GPSGLLAHAFPPGPNYGGDAHFDDDETWT-SSSKGYNLFLVAAHEFGH 226
Query: 180 STAVQNAPCTATVLWR----------SLQGDDIQGIKALY 209
S + ++ +++ L DD+QGI++LY
Sbjct: 227 SLGLDHSKDPGALMFPIYTYTGKSHFMLPDDDVQGIQSLY 266
>sp|O77656|MMP13_BOVIN Collagenase 3 OS=Bos taurus GN=MMP13 PE=2 SV=1
Length = 471
Score = 85.9 bits (211), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/222 (31%), Positives = 102/222 (45%), Gaps = 42/222 (18%)
Query: 7 IKTCQLNFNLKSTGFLDANTVAKMRTPRCGVADIVNGTTRMRSGKKKQQQNNHFHTVSQW 66
++ Q F L+ TG LD NT+ M+ PRCGV D+ + N F +W
Sbjct: 68 LREMQSFFGLEVTGRLDDNTLDIMKKPRCGVPDV--------------GEYNVFPRTLKW 113
Query: 67 PASKFSLTYAFRLG------TRGDAITPVARAFQTWAANTQFRFSKIEDFAGADIKISFE 120
SK +LTY R+ T + +AF+ W+ T F++I + ADI ISF
Sbjct: 114 --SKMNLTY--RIVNYTPDLTHSEVEKAFRKAFKVWSDVTPLNFTRIHN-GTADIMISFG 168
Query: 121 SRNHGDGRPFDGRGGPDGTLAHAFAP---TNGRFHYDADEPWAVGAVQGAFDSLKDTYII 177
++ HGD PFD GP G LAHAF P G H+D DE W + +G L +
Sbjct: 169 TKEHGDFYPFD---GPSGLLAHAFPPGPNYGGDAHFDDDETWT-SSSKGYNLFLVAAHEF 224
Query: 178 APSTAVQNAPCTATVLWR----------SLQGDDIQGIKALY 209
S + ++ +++ L DD+QGI++LY
Sbjct: 225 GHSLGLDHSKDPGALMFPIYTYTGKSHFMLPDDDVQGIQSLY 266
>sp|P52176|MMP9_BOVIN Matrix metalloproteinase-9 OS=Bos taurus GN=MMP9 PE=2 SV=1
Length = 712
Score = 85.9 bits (211), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/163 (36%), Positives = 82/163 (50%), Gaps = 19/163 (11%)
Query: 3 LESTIKTCQLNFNLKSTGFLDANTVAKMRTPRCGVADIVNGTTRMRSGKKKQQQNNHFHT 62
L+ + Q +L TG LD+ T+ MR PRCGV D+ G + G+ K H H
Sbjct: 67 LQRALLRFQRRLSLPETGELDSTTLNAMRAPRCGVPDV--GRFQTFEGELKW----HHHN 120
Query: 63 VSQWPASKFSLTYAFRLGTRGDAITPVARAFQTWAANTQFRFSKIEDFAGADIKISFESR 122
++ W + Y+ L R ARAF W+A T F+++ ADI I F R
Sbjct: 121 ITYWIQN-----YSEDL-PRAVIDDAFARAFALWSAVTPLTFTRVYG-PEADIVIQFGVR 173
Query: 123 NHGDGRPFDGRGGPDGTLAHAFAP---TNGRFHYDADEPWAVG 162
HGDG PFDG+ +G LAHAF P G H+D +E W++G
Sbjct: 174 EHGDGYPFDGK---NGLLAHAFPPGKGIQGDAHFDDEELWSLG 213
>sp|P28862|MMP3_MOUSE Stromelysin-1 OS=Mus musculus GN=Mmp3 PE=2 SV=2
Length = 477
Score = 85.5 bits (210), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/227 (31%), Positives = 99/227 (43%), Gaps = 41/227 (18%)
Query: 2 LLESTIKTCQLNFNLKSTGFLDANTVAKMRTPRCGVADIVNGTTRMRSGKKKQQQNNHFH 61
L+ I+ Q L+ TG LD+NT+ M PRCGV D V G + K ++ + +
Sbjct: 59 LIVKKIQEMQKFLGLEMTGKLDSNTMELMHKPRCGVPD-VGGFSTFPGSPKWRKSHITYR 117
Query: 62 TVSQWPASKFSLTYAFRLGTRGDAITPVARAFQTWAANTQFRFSKIEDFAGADIKISFES 121
V+ P R + + +A + W T FS+I + ADI ISF
Sbjct: 118 IVNYTPDL-----------PRQSVDSAIEKALKVWEEVTPLTFSRISE-GEADIMISFAV 165
Query: 122 RNHGDGRPFDGRGGPDGTLAHAFAP---TNGRFHYDADEPWA---------------VGA 163
HGD PFD GP LAHA+AP NG H+D DE W +G
Sbjct: 166 GEHGDFVPFD---GPGTVLAHAYAPGPGINGDAHFDDDERWTEDVTGTNLFLVAAHELGH 222
Query: 164 VQGAFDSLKDTYIIAPSTAVQNAPCTATVLWR-SLQGDDIQGIKALY 209
G + S K ++ P ++T L R L DD+ GI++LY
Sbjct: 223 SLGLYHSAKAEALMYPVYK------SSTDLSRFHLSQDDVDGIQSLY 263
>sp|P23097|MMP13_RAT Collagenase 3 (Fragment) OS=Rattus norvegicus GN=Mmp13 PE=1 SV=1
Length = 466
Score = 85.5 bits (210), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/217 (32%), Positives = 100/217 (46%), Gaps = 32/217 (14%)
Query: 7 IKTCQLNFNLKSTGFLDANTVAKMRTPRCGVADIVNGTTRMRSGKKKQQQNNHFHTVSQW 66
++ Q F L TG LD T+ MR PRCGV D+ R+ K Q N + V+
Sbjct: 63 LREMQSFFGLDVTGKLDDPTLDIMRKPRCGVPDVGVYNVFPRT-LKWSQTNLTYRIVNYT 121
Query: 67 P-ASKFSLTYAFRLGTRGDAITPVARAFQTWAANTQFRFSKIEDFAGADIKISFESRNHG 125
P S + AFR +AF+ W+ T F++I D ADI ISF ++ HG
Sbjct: 122 PDISHSEVEKAFR------------KAFKVWSDVTPLNFTRIHD-GTADIMISFGTKEHG 168
Query: 126 DGRPFDGRGGPDGTLAHAFAP---TNGRFHYDADEPWAVGAVQGAFDSLKDTYIIAPSTA 182
D PFD GP G LAHAF P G H+D DE W + +G + + + S
Sbjct: 169 DFYPFD---GPSGLLAHAFPPGPNLGGDAHFDDDETWT-SSSKGYNLFIVAAHELGHSLG 224
Query: 183 VQNAPCTATVLWR----------SLQGDDIQGIKALY 209
+ ++ +++ L DD+QGI++LY
Sbjct: 225 LDHSKDPGALMFPIYTYTGKSHFMLPDDDVQGIQSLY 261
>sp|P33435|MMP13_MOUSE Collagenase 3 OS=Mus musculus GN=Mmp13 PE=1 SV=1
Length = 472
Score = 85.5 bits (210), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/217 (32%), Positives = 100/217 (46%), Gaps = 32/217 (14%)
Query: 7 IKTCQLNFNLKSTGFLDANTVAKMRTPRCGVADIVNGTTRMRSGKKKQQQNNHFHTVSQW 66
++ Q F L+ TG LD T+ MR PRCGV D+ R+ K Q N + V+
Sbjct: 69 LREMQSFFGLEVTGKLDDPTLDIMRKPRCGVPDVGEYNVFPRT-LKWSQTNLTYRIVNYT 127
Query: 67 P-ASKFSLTYAFRLGTRGDAITPVARAFQTWAANTQFRFSKIEDFAGADIKISFESRNHG 125
P S + AFR +AF+ W+ T F++I D ADI ISF ++ HG
Sbjct: 128 PDMSHSEVEKAFR------------KAFKVWSDVTPLNFTRIYD-GTADIMISFGTKEHG 174
Query: 126 DGRPFDGRGGPDGTLAHAFAP---TNGRFHYDADEPWAVGAVQGAFDSLKDTYIIAPSTA 182
D PFD GP G LAHAF P G H+D DE W + +G + + + S
Sbjct: 175 DFYPFD---GPSGLLAHAFPPGPNYGGDAHFDDDETWT-SSSKGYNLFIVAAHELGHSLG 230
Query: 183 VQNAPCTATVLWR----------SLQGDDIQGIKALY 209
+ ++ +++ L DD+QGI+ LY
Sbjct: 231 LDHSKDPGALMFPIYTYTGKSHFMLPDDDVQGIQFLY 267
>sp|Q28397|MMP3_HORSE Stromelysin-1 OS=Equus caballus GN=MMP3 PE=2 SV=1
Length = 477
Score = 85.1 bits (209), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 73/225 (32%), Positives = 97/225 (43%), Gaps = 47/225 (20%)
Query: 7 IKTCQLNFNLKSTGFLDANTVAKMRTPRCGVADIVNGTTRMRSGKKKQQQNNHFHTVSQW 66
I+ Q LK TG LD++TV M RCGV D+ + TT F + +W
Sbjct: 64 IQEMQKFLGLKVTGKLDSDTVEVMHKSRCGVPDVGHFTT--------------FPGMPKW 109
Query: 67 PASKFSLTYAFRLGTRG---DAI-TPVARAFQTWAANTQFRFSKIEDFAGADIKISFESR 122
SK LTY T+ DA+ + V +A + W T FS+I + ADI I+F R
Sbjct: 110 --SKTHLTYRIVNYTQDLPRDAVDSDVEKALKIWEEVTPLTFSRIYE-GEADIMITFAVR 166
Query: 123 NHGDGRPFDGRGGPDGTLAHAFAP---TNGRFHYDADEPWA---------------VGAV 164
HGD PFD GP LAHA+ P NG H+D DE W +G
Sbjct: 167 EHGDFFPFD---GPGKVLAHAYPPGPGMNGDAHFDDDEHWTKDASGINFLLVAAHELGHS 223
Query: 165 QGAFDSLKDTYIIAPSTAVQNAPCTATVLWRSLQGDDIQGIKALY 209
G + S ++ P P L DD+ GI++LY
Sbjct: 224 LGLYHSTNTEALMYPLYNTLKGPARV-----RLSQDDVTGIQSLY 263
>sp|P03956|MMP1_HUMAN Interstitial collagenase OS=Homo sapiens GN=MMP1 PE=1 SV=3
Length = 469
Score = 85.1 bits (209), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 95/214 (44%), Gaps = 28/214 (13%)
Query: 7 IKTCQLNFNLKSTGFLDANTVAKMRTPRCGVADIVNGTTRMRSGKKKQQQNNHFHTVSQW 66
+K Q F LK TG DA T+ M+ PRCGV D+ + G + +Q + + + +
Sbjct: 64 LKQMQEFFGLKVTGKPDAETLKVMKQPRCGVPDVAQFV--LTEGNPRWEQTHLTYRIENY 121
Query: 67 PASKFSLTYAFRLGTRGDAITPVARAFQTWAANTQFRFSKIEDFAGADIKISFESRNHGD 126
R D + +AFQ W+ T F+K+ + ADI ISF +H D
Sbjct: 122 TPDL----------PRADVDHAIEKAFQLWSNVTPLTFTKVSE-GQADIMISFVRGDHRD 170
Query: 127 GRPFDGRGGPDGTLAHAFAP---TNGRFHYDADEPWAVGAVQGAFDSLKDTYIIAPSTAV 183
PFD GP G LAHAF P G H+D DE W + + + + S +
Sbjct: 171 NSPFD---GPGGNLAHAFQPGPGIGGDAHFDEDERWTNNFREYNLHRVA-AHELGHSLGL 226
Query: 184 QNAPCTATVLWRS--------LQGDDIQGIKALY 209
++ +++ S L DDI GI+A+Y
Sbjct: 227 SHSTDIGALMYPSYTFSGDVQLAQDDIDGIQAIY 260
>sp|P34960|MMP12_MOUSE Macrophage metalloelastase OS=Mus musculus GN=Mmp12 PE=1 SV=3
Length = 473
Score = 84.7 bits (208), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 72/225 (32%), Positives = 104/225 (46%), Gaps = 38/225 (16%)
Query: 2 LLESTIKTCQLNFNLKSTGFLDANTVAKMRTPRCGVADIVNGTTRMRSGKKKQQQNNHFH 61
L+ ++ Q F L++TG LD +T+A M PRCGV D+ +R+ ++
Sbjct: 63 FLKEKLQEMQQFFGLEATGQLDNSTLAIMHIPRCGVPDV----QHLRAVPQR-------- 110
Query: 62 TVSQWPASKFSLTYAFRLGT----RGDAITPVARAFQTWAANTQFRFSKIEDFAGADIKI 117
S+W K LTY T R D +AFQ W+ T RF K+ ADI I
Sbjct: 111 --SRW--MKRYLTYRIYNYTPDMKREDVDYIFQKAFQVWSDVTPLRFRKLHK-DEADIMI 165
Query: 118 SFESRNHGDGRPFDGRGGPDGTLAHAFAP---TNGRFHYDADEPWAVGAVQGAFDSLKDT 174
F HGD FDG+G GTLAHAF P G H+D E W + QG L
Sbjct: 166 LFAFGAHGDFNYFDGKG---GTLAHAFYPGPGIQGDAHFDEAETWT-KSFQGTNLFLVAV 221
Query: 175 YIIAPSTAVQNAPCTATVLWRS----------LQGDDIQGIKALY 209
+ + S +Q++ ++++ + L DDI+ I++LY
Sbjct: 222 HELGHSLGLQHSNNPKSIMYPTYRYLNPSTFRLSADDIRNIQSLY 266
>sp|P13943|MMP1_RABIT Interstitial collagenase OS=Oryctolagus cuniculus GN=MMP1 PE=2 SV=1
Length = 468
Score = 84.7 bits (208), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 97/219 (44%), Gaps = 28/219 (12%)
Query: 2 LLESTIKTCQLNFNLKSTGFLDANTVAKMRTPRCGVADIVNGTTRMRSGKKKQQQNNHFH 61
L +K Q F LK TG DA T+ M+ PRCGV D+ + G + +Q + +
Sbjct: 58 LAVEKLKQMQEFFGLKVTGKPDAETLKMMKQPRCGVPDVAQFV--LTPGNPRWEQTHLTY 115
Query: 62 TVSQWPASKFSLTYAFRLGTRGDAITPVARAFQTWAANTQFRFSKIEDFAGADIKISFES 121
+ + +R D + +AFQ W+ T F+K+ ADI ISF
Sbjct: 116 RIENYTPDL----------SRADVDNAIEKAFQLWSNVTPLTFTKVSK-GQADIMISFVR 164
Query: 122 RNHGDGRPFDGRGGPDGTLAHAFAP---TNGRFHYDADEPWA-----VGAVQGAFDSLKD 173
+H D PFD GP+G LAHAF P G H+D D+ W + A L
Sbjct: 165 GDHRDNSPFD---GPEGQLAHAFQPGLGIGGDVHFDEDDRWTKDFRNYNLYRVAAHELGH 221
Query: 174 TYIIAPSTAVQNAPCTATVLWR---SLQGDDIQGIKALY 209
+ ++ ST + A ++ L DDI GI+A+Y
Sbjct: 222 SLGLSHSTDI-GALMYPNYMFSGDVQLAQDDIDGIQAIY 259
>sp|O18927|MMP13_HORSE Collagenase 3 OS=Equus caballus GN=MMP13 PE=2 SV=1
Length = 472
Score = 84.7 bits (208), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 101/222 (45%), Gaps = 42/222 (18%)
Query: 7 IKTCQLNFNLKSTGFLDANTVAKMRTPRCGVADIVNGTTRMRSGKKKQQQNNHFHTVSQW 66
++ Q F L+ TG LD NT+ M+ PRCGV D+ + N F +W
Sbjct: 69 LREMQSFFGLEVTGKLDDNTLDIMKKPRCGVPDV--------------GEYNVFPRTLKW 114
Query: 67 PASKFSLTYAFRLG------TRGDAITPVARAFQTWAANTQFRFSKIEDFAGADIKISFE 120
P K +LTY R+ T + +AF+ W+ T F+++ + ADI ISF
Sbjct: 115 P--KMNLTY--RIVNYTPDLTHSEVEKAFKKAFKVWSDVTPLNFTRLYN-GTADIMISFG 169
Query: 121 SRNHGDGRPFDGRGGPDGTLAHAFAP---TNGRFHYDADEPWAVGAVQGAFDSLKDTYII 177
++ HGD PFD GP G LAHAF P G H+D DE W + +G L +
Sbjct: 170 TKEHGDFYPFD---GPSGLLAHAFPPGPNYGGDAHFDDDETWT-SSSKGYNLFLVAAHEF 225
Query: 178 APSTAVQNAPCTATVLWR----------SLQGDDIQGIKALY 209
S + ++ +++ L DD+QGI+ LY
Sbjct: 226 GHSLGLDHSKDPGALMFPIYTYTGKSHFVLPDDDVQGIQYLY 267
>sp|Q9GKE1|MMP27_TUPBE Matrix metalloproteinase-27 OS=Tupaia belangeri GN=MMP27 PE=2 SV=1
Length = 512
Score = 84.3 bits (207), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 76/232 (32%), Positives = 101/232 (43%), Gaps = 53/232 (22%)
Query: 2 LLESTIKTCQLNFNLKSTGFLDANTVAKMRTPRCGVADIVNGTTRMRSGKKKQQQNNHFH 61
LL+ I+ Q F L TG LD+NT+ M+TPRCGV D+ + +
Sbjct: 58 LLDGKIREMQAFFGLTVTGTLDSNTLEIMKTPRCGVPDV----------------GQYGY 101
Query: 62 TVSQWPASKFSLTYAFRLGT----RGDAITPVARAFQTWAANTQFRFSKIEDFAG-ADIK 116
T+ W K++LTY T R D + +A + W+ T F+KI F G ADI
Sbjct: 102 TLPGW--RKYNLTYRIMNYTPDMARADVDEAIQKALEVWSKVTPLTFTKI--FKGIADIM 157
Query: 117 ISFESRNHGD-GRPFDGRGGPDGTLAHAFAP---TNGRFHYDADEPWA------------ 160
I+F +R HG R FD GP G L HAF P G H+D DE W
Sbjct: 158 IAFRTRVHGRCPRYFD---GPLGVLGHAFPPGLGLGGDTHFDEDENWTKDTAGFSLFLVA 214
Query: 161 ---VGAVQGAFDSLKDTYIIAPSTAVQNAPCTATVLWRSLQGDDIQGIKALY 209
G G S T ++ P+ V P L DDI GI+++Y
Sbjct: 215 AHEFGHALGLSHSNDQTALMFPN-YVSLDPSKY-----PLSQDDIDGIQSIY 260
>sp|Q9Y5R2|MMP24_HUMAN Matrix metalloproteinase-24 OS=Homo sapiens GN=MMP24 PE=2 SV=1
Length = 645
Score = 84.3 bits (207), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 101/233 (43%), Gaps = 39/233 (16%)
Query: 3 LESTIKTCQLNFNLKSTGFLDANTVAKMRTPRCGVADIVNGTTRMRSGK-----KKQQQN 57
L+S + T Q + + TG LD T+ M+ PRCGV D + + R R+ + +K +Q
Sbjct: 107 LQSAVSTMQQFYGIPVTGVLDQTTIEWMKKPRCGVPDHPHLSRRRRNKRYALTGQKWRQK 166
Query: 58 NHFHTVSQWPASKFSLTYAFRLGTRGDAITPVARAFQTWAANTQFRFSKI------EDFA 111
+ +++ Y ++G D + +AF W T F ++ D
Sbjct: 167 HITYSIH---------NYTPKVGEL-DTRKAIRQAFDVWQKVTPLTFEEVPYHEIKSDRK 216
Query: 112 GADIKISFESRNHGDGRPFDGRGGPDGTLAHAFAP---TNGRFHYDADEPWAVG------ 162
ADI I F S HGD PFDG G G LAHA+ P G H+D+DEPW +G
Sbjct: 217 EADIMIFFASGFHGDSSPFDGEG---GFLAHAYFPGPGIGGDTHFDSDEPWTLGNANHDG 273
Query: 163 ------AVQGAFDSLKDTYIIAPSTAVQNAPCTATVLWRSLQGDDIQGIKALY 209
AV +L + PS + L DD+QGI+ +Y
Sbjct: 274 NDLFLVAVHELGHALGLEHSSDPSAIMAPFYQYMETHNFKLPQDDLQGIQKIY 326
>sp|P28863|MMP3_RABIT Stromelysin-1 OS=Oryctolagus cuniculus GN=MMP3 PE=2 SV=1
Length = 478
Score = 84.0 bits (206), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 76/226 (33%), Positives = 97/226 (42%), Gaps = 49/226 (21%)
Query: 7 IKTCQLNFNLKSTGFLDANTVAKMRTPRCGVADIVNGTTRMRSGKKKQQQNNHFHTVSQW 66
I+ Q L+ TG LD+NT+ +R PRCGV D+ HF T
Sbjct: 65 IQEMQKFLGLEVTGKLDSNTLEVIRKPRCGVPDV-----------------GHFSTFPGT 107
Query: 67 PA-SKFSLTYAFRLGT----RGDAITPVARAFQTWAANTQFRFSKIEDFAGADIKISFES 121
P +K LTY T R + +A + W T FS+ + ADI ISF
Sbjct: 108 PKWTKTHLTYRIVNYTPDLPRDAVDAAIEKALKVWEEVTPLTFSRKYE-GEADIMISFGV 166
Query: 122 RNHGDGRPFDGRGGPDGTLAHAFAP---TNGRFHYDADEPWA---------------VGA 163
R HGD PFD GP LAHA+AP NG H+D DE W +G
Sbjct: 167 REHGDFIPFD---GPGNVLAHAYAPGPGINGDAHFDDDEQWTKDTTGTNLFLVAAHELGH 223
Query: 164 VQGAFDSLKDTYIIAPSTAVQNAPCTATVLWRSLQGDDIQGIKALY 209
G F S ++ P V NA T +R L DD+ GI++LY
Sbjct: 224 SLGLFHSANPEALMYP---VYNA-FTDLARFR-LSQDDVDGIQSLY 264
>sp|Q9R0S2|MMP24_MOUSE Matrix metalloproteinase-24 OS=Mus musculus GN=Mmp24 PE=1 SV=2
Length = 618
Score = 84.0 bits (206), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 101/233 (43%), Gaps = 39/233 (16%)
Query: 3 LESTIKTCQLNFNLKSTGFLDANTVAKMRTPRCGVADIVNGTTRMRSGK-----KKQQQN 57
L+S + T Q + + TG LD T+ M+ PRCGV D + + R R+ + +K +Q
Sbjct: 80 LQSAVSTMQQFYGIPVTGVLDQTTIEWMKKPRCGVPDHPHLSRRRRNKRYALTGQKWRQK 139
Query: 58 NHFHTVSQWPASKFSLTYAFRLGTRGDAITPVARAFQTWAANTQFRFSKI------EDFA 111
+ +++ Y ++G D + +AF W T F ++ D
Sbjct: 140 HITYSIH---------NYTPKVGEL-DTRKAIRQAFDVWQKVTPLTFEEVPYHEIKSDRK 189
Query: 112 GADIKISFESRNHGDGRPFDGRGGPDGTLAHAFAP---TNGRFHYDADEPWAVG------ 162
ADI I F S HGD PFDG G G LAHA+ P G H+D+DEPW +G
Sbjct: 190 EADIMIFFASGFHGDSSPFDGEG---GFLAHAYFPGPGIGGDTHFDSDEPWTLGNANHDG 246
Query: 163 ------AVQGAFDSLKDTYIIAPSTAVQNAPCTATVLWRSLQGDDIQGIKALY 209
AV +L + PS + L DD+QGI+ +Y
Sbjct: 247 NDLFLVAVHELGHALGLEHSNDPSAIMAPFYQYMETHNFKLPQDDLQGIQKIY 299
>sp|Q99PW6|MMP24_RAT Matrix metalloproteinase-24 OS=Rattus norvegicus GN=Mmp24 PE=2 SV=1
Length = 618
Score = 84.0 bits (206), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 101/233 (43%), Gaps = 39/233 (16%)
Query: 3 LESTIKTCQLNFNLKSTGFLDANTVAKMRTPRCGVADIVNGTTRMRSGK-----KKQQQN 57
L+S + T Q + + TG LD T+ M+ PRCGV D + + R R+ + +K +Q
Sbjct: 80 LQSAVSTMQQFYGIPVTGVLDQTTIEWMKKPRCGVPDHPHLSRRRRNKRYALTGQKWRQK 139
Query: 58 NHFHTVSQWPASKFSLTYAFRLGTRGDAITPVARAFQTWAANTQFRFSKI------EDFA 111
+ +++ Y ++G D + +AF W T F ++ D
Sbjct: 140 HITYSIH---------NYTPKVGEL-DTRKAIRQAFDVWQKVTPLTFEEVPYHEIKSDRK 189
Query: 112 GADIKISFESRNHGDGRPFDGRGGPDGTLAHAFAP---TNGRFHYDADEPWAVG------ 162
ADI I F S HGD PFDG G G LAHA+ P G H+D+DEPW +G
Sbjct: 190 EADIMIFFASGFHGDSSPFDGEG---GFLAHAYFPGPGIGGDTHFDSDEPWTLGNANHDG 246
Query: 163 ------AVQGAFDSLKDTYIIAPSTAVQNAPCTATVLWRSLQGDDIQGIKALY 209
AV +L + PS + L DD+QGI+ +Y
Sbjct: 247 NDLFLVAVHELGHALGLEHSNDPSAIMAPFYQYMETHNFKLPQDDLQGIQKIY 299
>sp|P09237|MMP7_HUMAN Matrilysin OS=Homo sapiens GN=MMP7 PE=1 SV=1
Length = 267
Score = 83.6 bits (205), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 97/224 (43%), Gaps = 37/224 (16%)
Query: 3 LESTIKTCQLNFNLKSTGFLDANTVAKMRTPRCGVADIVNGTTRMRSGKKKQQQNNHFHT 62
LE+ +K Q F L TG L++ + M+ PRCGV D+ + + F
Sbjct: 55 LEAKLKEMQKFFGLPITGMLNSRVIEIMQKPRCGVPDVA--------------EYSLFPN 100
Query: 63 VSQWPASKFSLTYAFRLGTRG-DAITP---VARAFQTWAANTQFRFSKIEDFAGADIKIS 118
+W + +TY TR IT V++A W F K+ + ADI I
Sbjct: 101 SPKWTSK--VVTYRIVSYTRDLPHITVDRLVSKALNMWGKEIPLHFRKVV-WGTADIMIG 157
Query: 119 FESRNHGDGRPFDGRGGPDGTLAHAFAP---TNGRFHYDADEPWAVGAVQGAFDSLKDTY 175
F HGD PFD GP TLAHAFAP G H+D DE W G+ G T+
Sbjct: 158 FARGAHGDSYPFD---GPGNTLAHAFAPGTGLGGDAHFDEDERWTDGSSLGINFLYAATH 214
Query: 176 IIAPSTAVQNAPCTATVLWRS----------LQGDDIQGIKALY 209
+ S + ++ V++ + L DDI+GI+ LY
Sbjct: 215 ELGHSLGMGHSSDPNAVMYPTYGNGDPQNFKLSQDDIKGIQKLY 258
>sp|P22894|MMP8_HUMAN Neutrophil collagenase OS=Homo sapiens GN=MMP8 PE=1 SV=1
Length = 467
Score = 83.6 bits (205), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/232 (30%), Positives = 99/232 (42%), Gaps = 48/232 (20%)
Query: 2 LLESTIKTCQLNFNLKSTGFLDANTVAKMRTPRCGVADIVNGTTRMRSGKKKQQQNNHFH 61
++ +K Q F L TG + T+ M+ PRCGV D +G + G K ++ N
Sbjct: 58 VIVEKLKEMQRFFGLNVTGKPNEETLDMMKKPRCGVPD--SGGFMLTPGNPKWERTN--- 112
Query: 62 TVSQWPASKFSLTYAFRLGTRGDAITPVARA----FQTWAANTQFRFSKIEDFAGADIKI 117
LTY R T + V RA F+ W+ + F++I ADI I
Sbjct: 113 -----------LTYRIRNYTPQLSEAEVERAIKDAFELWSVASPLIFTRISQ-GEADINI 160
Query: 118 SFESRNHGDGRPFDGRGGPDGTLAHAFAP---TNGRFHYDADEPWA-------------- 160
+F R+HGD PFD GP+G LAHAF P G H+DA+E W
Sbjct: 161 AFYQRDHGDNSPFD---GPNGILAHAFQPGQGIGGDAHFDAEETWTNTSANYNLFLVAAH 217
Query: 161 -VGAVQGAFDSLKDTYIIAPSTAVQNAPCTATVLWRSLQGDDIQGIKALYNV 211
G G S ++ P+ A + SL DDI GI+A+Y +
Sbjct: 218 EFGHSLGLAHSSDPGALMYPNYAFRETSNY------SLPQDDIDGIQAIYGL 263
>sp|Q9R0S3|MMP17_MOUSE Matrix metalloproteinase-17 OS=Mus musculus GN=Mmp17 PE=1 SV=3
Length = 578
Score = 83.2 bits (204), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/172 (36%), Positives = 86/172 (50%), Gaps = 30/172 (17%)
Query: 1 ELLESTIKTCQLNFNLKSTGFLDANTVAKMRTPRCGVADIVNGTTRMRSGKKKQQQNNHF 60
E L I Q L++TG LD T+A M+TPRC + D+ G +S +K+Q
Sbjct: 75 EELSKAITAMQQFGGLETTGILDEATLALMKTPRCSLPDLPPGA---QSRRKRQTP---- 127
Query: 61 HTVSQWPASKFSLTYAFRLGTRGDAITPVAR---------AFQTWAANTQFRFSKIEDFA 111
++W SK +L++ R R +P+ R A + W+ T F ++ A
Sbjct: 128 -PPTKW--SKRNLSWRVRTFPRD---SPLGRDTVRALMYYALKVWSDITPLNFHEVAGNA 181
Query: 112 GADIKISFESRNHGDGRPFDGRGGPDGTLAHAFAP----TNGRFHYDADEPW 159
ADI+I F +H DG PFD GP GT+AHAF P T G H+D DEPW
Sbjct: 182 -ADIQIDFSKADHNDGYPFD---GPGGTVAHAFFPGDHHTAGDTHFDDDEPW 229
>sp|O54732|MMP15_MOUSE Matrix metalloproteinase-15 OS=Mus musculus GN=Mmp15 PE=2 SV=1
Length = 657
Score = 83.2 bits (204), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/238 (30%), Positives = 111/238 (46%), Gaps = 40/238 (16%)
Query: 1 ELLESTIKTCQLNFNLKSTGFLDANTVAKMRTPRCGVADI--VNGTTRMRSGKKKQ---- 54
++L S + Q + + TG LD T M+ PRCGV D V+ +R +K+
Sbjct: 73 QILASALAEMQSFYGIPVTGVLDEETKTWMKRPRCGVPDQFGVHVKANLRRRRKRYTLTG 132
Query: 55 QQNNHFHTVSQWPASKFSL-TYAFRLGTRGDAITPVARAFQTWAANTQFRFSKI--EDF- 110
+ N++H FS+ Y +LG +++ V RAFQ W T F ++ +D
Sbjct: 133 KAWNNYHLT-------FSIQNYTEKLGWY-NSMEAVRRAFQVWEQVTPLVFQEVSYDDIR 184
Query: 111 ----AGADIKISFESRNHGDGRPFDGRGGPDGTLAHAFAP---TNGRFHYDADEPWAVGA 163
A ADI + F S HGD PFDG G G LAHA+ P G H+DADEPW +
Sbjct: 185 LRRRAEADIMVLFASGFHGDSSPFDGVG---GFLAHAYFPGPGLGGDTHFDADEPWTFSS 241
Query: 164 --VQGAFDSLKDTYIIAPSTAVQNAPCTATVL-----WR-----SLQGDDIQGIKALY 209
+ G L + + + ++++ + ++ W L DD++GI+ LY
Sbjct: 242 TDLHGISLFLVAVHELGHALGLEHSSNPSAIMAPFYQWMDTDNFQLPEDDLRGIQQLY 299
>sp|P51511|MMP15_HUMAN Matrix metalloproteinase-15 OS=Homo sapiens GN=MMP15 PE=1 SV=1
Length = 669
Score = 83.2 bits (204), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/238 (30%), Positives = 107/238 (44%), Gaps = 40/238 (16%)
Query: 1 ELLESTIKTCQLNFNLKSTGFLDANTVAKMRTPRCGVADI--VNGTTRMRSGKKK----- 53
++L S + Q + + TG LD T M+ PRCGV D V +R +K+
Sbjct: 77 QILASALAEMQRFYGIPVTGVLDEETKEWMKRPRCGVPDQFGVRVKANLRRRRKRYALTG 136
Query: 54 QQQNNHFHTVSQWPASKFSLTYAFRLGTRGDAITPVARAFQTWAANTQFRFSKI--EDF- 110
++ NNH T S Y +LG ++ V RAF+ W T F ++ ED
Sbjct: 137 RKWNNHHLTFS-------IQNYTEKLGWY-HSMEAVRRAFRVWEQATPLVFQEVPYEDIR 188
Query: 111 ----AGADIKISFESRNHGDGRPFDGRGGPDGTLAHAFAP---TNGRFHYDADEPWAVGA 163
ADI + F S HGD PFDG G G LAHA+ P G H+DADEPW +
Sbjct: 189 LRRQKEADIMVLFASGFHGDSSPFDGTG---GFLAHAYFPGPGLGGDTHFDADEPWTFSS 245
Query: 164 --VQGAFDSLKDTYIIAPSTAVQNAPCTATVL-----WR-----SLQGDDIQGIKALY 209
+ G L + + + ++++ ++ W+ L DD++GI+ LY
Sbjct: 246 TDLHGNNLFLVAVHELGHALGLEHSSNPNAIMAPFYQWKDVDNFKLPEDDLRGIQQLY 303
>sp|P28053|MMP1_BOVIN Interstitial collagenase OS=Bos taurus GN=MMP1 PE=1 SV=1
Length = 469
Score = 83.2 bits (204), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 95/219 (43%), Gaps = 28/219 (12%)
Query: 2 LLESTIKTCQLNFNLKSTGFLDANTVAKMRTPRCGVADIVNGTTRMRSGKKKQQQNNHFH 61
L+ +K Q F L+ TG DA T+ M+ PRCGV D+ + GK + N +
Sbjct: 59 LITEKLKQMQKFFGLRVTGKPDAETLNVMKQPRCGVPDVAPFV--LTPGKSCWENTNLTY 116
Query: 62 TVSQWPASKFSLTYAFRLGTRGDAITPVARAFQTWAANTQFRFSKIEDFAGADIKISFES 121
+ + +R D + +AFQ W+ T F+K+ + ADI ISF
Sbjct: 117 RIENYTPDL----------SRADVDQAIEKAFQLWSNVTPLTFTKVSE-GQADIMISFVR 165
Query: 122 RNHGDGRPFDGRGGPDGTLAHAFAP---TNGRFHYDADEPWAVGAVQGAFDSLKDTYIIA 178
+H D PFD GP G LAHAF P G H+D DE W Q +
Sbjct: 166 GDHRDNSPFD---GPGGNLAHAFQPGAGIGGDAHFDDDE-WWTSNFQDYNLYRVAAHEFG 221
Query: 179 PSTAVQNAPCTATVLWRS--------LQGDDIQGIKALY 209
S + ++ +++ S L DDI GI+A+Y
Sbjct: 222 HSLGLAHSTDIGALMYPSYTFSGDVQLSQDDIDGIQAIY 260
>sp|P21692|MMP1_PIG Interstitial collagenase OS=Sus scrofa GN=MMP1 PE=1 SV=2
Length = 469
Score = 83.2 bits (204), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 97/221 (43%), Gaps = 32/221 (14%)
Query: 2 LLESTIKTCQLNFNLKSTGFLDANTVAKMRTPRCGVADIVNGTTRMRSGKKKQQQNNHFH 61
L+ +K Q F LK TG DA T+ M+ PRCGV D+ + G + + + +
Sbjct: 59 LVVEKLKQMQQFFGLKVTGKPDAETLNVMKQPRCGVPDVAEFV--LTPGNPRWENTHLTY 116
Query: 62 TVSQWPASKFSLTYAFRLGTRGDAITPVARAFQTWAANTQFRFSKIEDFAGADIKISFES 121
+ + +R D + +AFQ W+ + F+K+ + ADI ISF
Sbjct: 117 RIENYTPDL----------SREDVDRAIEKAFQLWSNVSPLTFTKVSE-GQADIMISFVR 165
Query: 122 RNHGDGRPFDGRGGPDGTLAHAFAP---TNGRFHYDADEPWA-----VGAVQGAFDSLKD 173
+H D PFD GP G LAHAF P G H+D DE W + A L
Sbjct: 166 GDHRDNSPFD---GPGGNLAHAFQPGPGIGGDAHFDEDERWTKNFRDYNLYRVAAHELGH 222
Query: 174 TYIIAPSTAV-----QNAPCTATVLWRSLQGDDIQGIKALY 209
+ ++ ST + N T V L DDI GI+A+Y
Sbjct: 223 SLGLSHSTDIGALMYPNYIYTGDV---QLSQDDIDGIQAIY 260
>sp|Q10835|MMP13_XENLA Collagenase 3 (Fragment) OS=Xenopus laevis GN=mmp13 PE=2 SV=1
Length = 469
Score = 82.8 bits (203), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 98/222 (44%), Gaps = 34/222 (15%)
Query: 3 LESTIKTCQLNFNLKSTGFLDANTVAKMRTPRCGVADIVNGTTRMRSGKKKQQQNNHFHT 62
+E+ +K Q F L+ TG L+ +T+ M+ PRCGV D+ Q N F
Sbjct: 62 IETKLKEMQSFFGLEVTGKLNEDTLDIMKQPRCGVPDV--------------GQYNFFPR 107
Query: 63 VSQWPASKFS---LTYAFRLGTRGDAITPVARAFQTWAANTQFRFSKIEDFAGADIKISF 119
+WP + + + Y L T + + +A + W+ T F+++ ADI +SF
Sbjct: 108 KLKWPRNNLTYRIVNYTPDLST-SEVDRAIKKALKVWSDVTPLNFTRLRT-GTADIMVSF 165
Query: 120 ESRNHGDGRPFDGRGGPDGTLAHAFAP---TNGRFHYDADEPWA---------VGAVQGA 167
+ HGD PFD GPDG LAHAF P G H+D DE ++ V A
Sbjct: 166 GKKEHGDYYPFD---GPDGLLAHAFPPGEKLGGDTHFDDDEMFSTDNKGYNLFVVAAHEF 222
Query: 168 FDSLKDTYIIAPSTAVQNAPCTATVLWRSLQGDDIQGIKALY 209
+L + P + + L DD+QGI+ LY
Sbjct: 223 GHALGLDHSRDPGSLMFPVYTYTETSRFVLPDDDVQGIQVLY 264
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.133 0.411
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 81,546,368
Number of Sequences: 539616
Number of extensions: 3516918
Number of successful extensions: 5666
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 93
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 5297
Number of HSP's gapped (non-prelim): 127
length of query: 211
length of database: 191,569,459
effective HSP length: 112
effective length of query: 99
effective length of database: 131,132,467
effective search space: 12982114233
effective search space used: 12982114233
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 59 (27.3 bits)