Query 039712
Match_columns 211
No_of_seqs 174 out of 984
Neff 6.8
Searched_HMMs 29240
Date Mon Mar 25 21:39:40 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/039712.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/039712hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1eak_A 72 kDa type IV collagen 100.0 1.1E-59 3.7E-64 426.7 18.2 142 2-163 38-186 (421)
2 1l6j_A Matrix metalloproteinas 100.0 1.1E-58 3.9E-63 420.7 17.3 143 1-163 46-195 (425)
3 1ck7_A Protein (gelatinase A); 100.0 3.9E-56 1.3E-60 422.0 17.5 142 2-163 40-188 (631)
4 1slm_A Stromelysin-1; hydrolas 100.0 1.5E-53 5.1E-58 366.3 17.2 187 2-211 42-248 (255)
5 1su3_A Interstitial collagenas 100.0 3.1E-49 1E-53 363.3 17.9 188 1-211 39-243 (450)
6 3ma2_D Matrix metalloproteinas 100.0 2.1E-44 7.3E-49 295.1 11.2 144 62-211 4-174 (181)
7 830c_A MMP-13, MMP-13; matrix 100.0 2.7E-42 9.3E-47 279.6 12.4 144 59-211 3-165 (168)
8 2ovx_A Matrix metalloproteinas 100.0 3.3E-38 1.1E-42 253.1 12.6 140 62-209 3-159 (159)
9 2xs4_A Karilysin protease; hyd 100.0 1.3E-37 4.3E-42 251.1 11.8 141 62-211 4-164 (167)
10 3ayu_A 72 kDa type IV collagen 100.0 5.7E-37 2E-41 247.9 12.5 145 59-211 3-164 (167)
11 1rm8_A MMP-16, matrix metallop 100.0 1.8E-36 6.3E-41 244.9 13.0 142 64-211 2-169 (169)
12 2y6d_A Matrilysin; hydrolase; 100.0 1.5E-36 5E-41 246.9 12.3 147 57-211 2-167 (174)
13 1y93_A Macrophage metalloelast 100.0 2.1E-36 7.3E-41 242.7 11.4 139 63-210 2-159 (159)
14 1hv5_A Stromelysin 3; inhibiti 100.0 2.2E-36 7.5E-41 243.7 10.5 141 63-211 6-163 (165)
15 1kap_P Alkaline protease; calc 100.0 2.1E-37 7.1E-42 286.5 4.8 177 2-211 10-257 (479)
16 1i76_A MMP-8;, neutrophil coll 100.0 8.1E-36 2.8E-40 240.1 12.8 142 60-210 3-163 (163)
17 1k7i_A PROC, secreted protease 100.0 2.6E-37 9E-42 285.9 4.0 181 3-211 20-260 (479)
18 1hy7_A Stromelysin-1, MMP-3; m 100.0 6.2E-35 2.1E-39 236.8 12.5 144 59-211 3-166 (173)
19 1cge_A Fibroblast collagenase; 100.0 1.3E-34 4.5E-39 234.0 12.9 142 61-211 3-161 (168)
20 2jsd_A Matrix metalloproteinas 100.0 6.1E-34 2.1E-38 227.7 11.7 140 63-211 2-160 (160)
21 1g9k_A Serralysin; beta jelly 100.0 1.9E-34 6.4E-39 265.8 4.0 170 1-211 9-245 (463)
22 3ba0_A Macrophage metalloelast 100.0 4.2E-33 1.4E-37 249.9 12.2 138 64-210 2-158 (365)
23 1sat_A Serratia protease; para 100.0 4.7E-34 1.6E-38 263.6 2.4 177 1-211 7-248 (471)
24 1c7k_A NCNP, zinc endoprotease 99.8 6.1E-19 2.1E-23 136.8 6.1 116 71-211 2-131 (132)
25 3edh_A Bone morphogenetic prot 98.3 1.3E-06 4.5E-11 71.9 7.4 65 63-133 7-71 (201)
26 3lq0_A Proastacin; metallopept 98.0 6.8E-06 2.3E-10 69.2 5.9 59 62-126 40-98 (235)
27 3lqb_A Hatching enzyme, LOC792 97.1 0.00078 2.7E-08 55.2 6.0 58 63-126 9-71 (199)
28 3p24_A BFT-3; metzincins, meta 96.9 0.00046 1.6E-08 61.6 3.4 35 175-211 354-391 (397)
29 1lbu_A Muramoyl-pentapeptide c 96.7 0.0013 4.5E-08 53.8 4.1 32 2-33 45-76 (213)
30 3bkh_A Phikz144, lytic transgl 96.0 0.0048 1.6E-07 52.5 4.1 31 2-32 45-75 (268)
31 4fet_B Spore cortex-lytic enzy 95.7 0.0018 6.2E-08 53.9 0.0 31 2-32 40-70 (222)
32 2ikb_A Hypothetical protein NM 89.6 0.32 1.1E-05 38.5 4.1 30 4-33 91-120 (167)
33 2nr7_A Secretion activator pro 85.3 0.61 2.1E-05 37.8 3.4 29 4-32 103-131 (195)
34 4gwm_A Meprin A subunit beta; 83.0 2.1 7.1E-05 40.2 6.4 61 59-126 42-102 (592)
35 1uf2_K Structural protein P7; 39.9 17 0.00059 32.6 2.9 35 3-37 206-240 (506)
36 1k8v_A Neuropeptide F; moniezi 23.4 72 0.0025 19.0 2.8 23 1-36 18-40 (40)
No 1
>1eak_A 72 kDa type IV collagenase; hydrolase-hydrolase inhibitor complex, hydrolyse, matrix metalloproteinase, gelatinase A, hydrolase- hydrolase inhib complex; 2.66A {Homo sapiens} SCOP: a.20.1.2 d.92.1.11 g.14.1.2 g.14.1.2 g.14.1.2 PDB: 1ks0_A 1cxw_A
Probab=100.00 E-value=1.1e-59 Score=426.72 Aligned_cols=142 Identities=47% Similarity=0.768 Sum_probs=128.3
Q ss_pred hHHHHHHHHHHhcCCCccccCCHHHHHHHhCCCCCcccCCCCcccccCccccccccccccccCCCCCCccceeEEeecCC
Q 039712 2 LLESTIKTCQLNFNLKSTGFLDANTVAKMRTPRCGVADIVNGTTRMRSGKKKQQQNNHFHTVSQWPASKFSLTYAFRLGT 81 (211)
Q Consensus 2 ~~~~Ai~~fQ~~~~L~~TG~lD~~T~~~M~~pRCG~pD~~~~~~~~~~~~~~~~~~~~~~~~~kW~~~k~~LTy~i~~~~ 81 (211)
+|++|||+||+|+||||||+||++|+++|++|||||||+... ..+..+.||. |++|||+|.+++
T Consensus 38 ~~~~Ai~~~Q~f~gL~vTG~LD~~T~~~M~~PRCGvpD~~~~--------------~~~~~~~kW~--k~~LTY~i~~~~ 101 (421)
T 1eak_A 38 VLKDTLKKMQKFFGLPQTGDLDQNTIETMRKPRCGNPDVANY--------------NFFPRKPKWD--KNQITYRIIGYT 101 (421)
T ss_dssp HHHHHHHHHHHHSSCCCCCSCCHHHHHHHTSCBCSSCSSCSS--------------CCSSCCCCCS--SSEEEEEECCCC
T ss_pred HHHHHHHHHHHHcCCCCCCccCHHHHHHhcCCCCCCCCcccc--------------ccccCCcccc--cceEEEEEecCC
Confidence 689999999999999999999999999999999999997432 2334567997 999999999987
Q ss_pred cc----hhHHHHHHHHHHHHccCCcceEeccCCCCcceEEEeeeccCCCCCCCCCCCCCCCccccccCCC---CCccccc
Q 039712 82 RG----DAITPVARAFQTWAANTQFRFSKIEDFAGADIKISFESRNHGDGRPFDGRGGPDGTLAHAFAPT---NGRFHYD 154 (211)
Q Consensus 82 ~~----~~~~~i~~Af~~Ws~v~~l~F~ev~~~~~aDI~I~F~~~~hgd~~~fDG~g~~~g~lAhAf~P~---~G~ihfD 154 (211)
+. +++++|++||++|++|+||+|+||.++ .|||+|+|.+++|||++||||+| |+|||||+|. .|+||||
T Consensus 102 ~~l~~~~v~~~i~~AF~~Ws~vtpLtF~ev~~~-~ADI~I~F~~g~HgD~~pFDG~g---g~LAHAf~P~~g~~Gd~HFD 177 (421)
T 1eak_A 102 PDLDPETVDDAFARAFQVWSDVTPLRFSRIHDG-EADIMINFGRWEHGDGYPFDGKD---GLLAHAFAPGTGVGGDSHFD 177 (421)
T ss_dssp TTSCHHHHHHHHHHHHHHHHTSSSCEEEECCSS-CCSEEEEEECSSCSSSCCCCSSS---SBCEEECCSSSTTTTCEEEE
T ss_pred CCCCHHHHHHHHHHHHHHHhcccCceeEEcCCC-CCCEEEEEecCCCCCccccCCCC---CccccccCCCCCCCCceeee
Confidence 54 455678999999999999999999876 99999999999999999999999 9999999996 7999999
Q ss_pred CCCCcccCC
Q 039712 155 ADEPWAVGA 163 (211)
Q Consensus 155 ~de~Wt~~~ 163 (211)
++|.|++++
T Consensus 178 ~dE~Wt~~~ 186 (421)
T 1eak_A 178 DDELWTLGE 186 (421)
T ss_dssp TTSCEESSS
T ss_pred eccceeccC
Confidence 999999854
No 2
>1l6j_A Matrix metalloproteinase-9; twisted beta sheet flanked by helices, hydrolase; 2.50A {Homo sapiens} SCOP: a.20.1.2 d.92.1.11 g.14.1.2 g.14.1.2 g.14.1.2
Probab=100.00 E-value=1.1e-58 Score=420.72 Aligned_cols=143 Identities=39% Similarity=0.668 Sum_probs=127.8
Q ss_pred ChHHHHHHHHHHhcCCCccccCCHHHHHHHhCCCCCcccCCCCcccccCccccccccccccccCCCCCCccceeEEeecC
Q 039712 1 ELLESTIKTCQLNFNLKSTGFLDANTVAKMRTPRCGVADIVNGTTRMRSGKKKQQQNNHFHTVSQWPASKFSLTYAFRLG 80 (211)
Q Consensus 1 e~~~~Ai~~fQ~~~~L~~TG~lD~~T~~~M~~pRCG~pD~~~~~~~~~~~~~~~~~~~~~~~~~kW~~~k~~LTy~i~~~ 80 (211)
++|++|||+||+|+||||||+||++|+++|++|||||||+... .++..+.||. |++|||+|.++
T Consensus 46 ~~l~~Ai~~~Q~f~gL~vTG~LD~~T~~~M~~PRCGvpD~~~~--------------~~~~~~~kW~--k~~LTY~i~~~ 109 (425)
T 1l6j_A 46 KSLGPALLLLQKQLSLPETGELDSATLKAMRTPRCGVPDLGRF--------------QTFEGDLKWH--HHNITYWIQNY 109 (425)
T ss_dssp --CHHHHHHHHHHHTCCCCSSCCHHHHHHHTSCBCSSCSSSCS--------------SCCSSCSSCC--SSEEEEEECCC
T ss_pred HHHHHHHHHHHHHcCCCCCCccCHHHHHHhcCCCCCCcccccc--------------ccccCCcccc--cceeEEEEecC
Confidence 3688999999999999999999999999999999999997532 2344567997 99999999998
Q ss_pred Ccc----hhHHHHHHHHHHHHccCCcceEeccCCCCcceEEEeeeccCCCCCCCCCCCCCCCccccccCCC---CCcccc
Q 039712 81 TRG----DAITPVARAFQTWAANTQFRFSKIEDFAGADIKISFESRNHGDGRPFDGRGGPDGTLAHAFAPT---NGRFHY 153 (211)
Q Consensus 81 ~~~----~~~~~i~~Af~~Ws~v~~l~F~ev~~~~~aDI~I~F~~~~hgd~~~fDG~g~~~g~lAhAf~P~---~G~ihf 153 (211)
++. +++++|++||++|++|++|+|+||.++ .|||+|.|.+++|||++||||+| |+|||||+|. .|+|||
T Consensus 110 t~~l~~~~v~~~i~~Af~~Ws~vt~L~F~ev~~~-~ADI~I~F~~g~HgD~~pFDG~g---g~LAHAf~P~~g~~Gd~HF 185 (425)
T 1l6j_A 110 SEDLPRAVIDDAFARAFALWSAVTPLTFTRVYSR-DADIVIQFGVAEHGDGYPFDGKD---GLLAHAFPPGPGIQGDAHF 185 (425)
T ss_dssp CTTSCHHHHHHHHHHHHHHHHHTSSCEEEEECST-TSSEEEEEECSSCSSSCCCCSTT---SBCEEECCSSSTTTTCEEE
T ss_pred CCCCCHHHHHHHHHHHHHHHhhcccceEEEccCC-CCCEEEEEeeccCCCcccccCCC---cccccccCCCCCCCCceee
Confidence 754 455778999999999999999999876 99999999999999999999999 9999999995 799999
Q ss_pred cCCCCcccCC
Q 039712 154 DADEPWAVGA 163 (211)
Q Consensus 154 D~de~Wt~~~ 163 (211)
|++|.|+++.
T Consensus 186 D~dE~Wt~~~ 195 (425)
T 1l6j_A 186 DDDELWSLGK 195 (425)
T ss_dssp ETTSCEESSS
T ss_pred eeccccccCC
Confidence 9999999864
No 3
>1ck7_A Protein (gelatinase A); hydrolase (metalloprotease), FULL-length, metalloproteinase; 2.80A {Homo sapiens} SCOP: a.20.1.2 b.66.1.1 d.92.1.11 g.14.1.2 g.14.1.2 g.14.1.2 PDB: 1gxd_A
Probab=100.00 E-value=3.9e-56 Score=422.03 Aligned_cols=142 Identities=47% Similarity=0.768 Sum_probs=128.1
Q ss_pred hHHHHHHHHHHhcCCCccccCCHHHHHHHhCCCCCcccCCCCcccccCccccccccccccccCCCCCCccceeEEeecCC
Q 039712 2 LLESTIKTCQLNFNLKSTGFLDANTVAKMRTPRCGVADIVNGTTRMRSGKKKQQQNNHFHTVSQWPASKFSLTYAFRLGT 81 (211)
Q Consensus 2 ~~~~Ai~~fQ~~~~L~~TG~lD~~T~~~M~~pRCG~pD~~~~~~~~~~~~~~~~~~~~~~~~~kW~~~k~~LTy~i~~~~ 81 (211)
+|++|||+||+|+|||+||+||++|+++|++|||||||+... +++..+.||. |++|||+|.+++
T Consensus 40 ~~~~al~~~Q~~~gL~~TG~lD~~T~~~m~~PRCGvpD~~~~--------------~~~~~~~kW~--k~~LTy~i~~~~ 103 (631)
T 1ck7_A 40 VLKDTLKKMQKFFGLPQTGDLDQNTIETMRKPRCGNPDVANY--------------NFFPRKPKWD--KNQITYRIIGYT 103 (631)
T ss_dssp HHHHHHHHHHHHHTCCSCSSCCHHHHHHTTSCBCSSCSSCSC--------------SSSCSSCSCS--CSEEEEEECCCC
T ss_pred HHHHHHHHHHHHcCCCCccccCHHHHHHhcCCCCCCCCcccc--------------ccccCCcccc--cccceEEEecCC
Confidence 689999999999999999999999999999999999997432 2334567997 999999999987
Q ss_pred cc----hhHHHHHHHHHHHHccCCcceEeccCCCCcceEEEeeeccCCCCCCCCCCCCCCCccccccCCC---CCccccc
Q 039712 82 RG----DAITPVARAFQTWAANTQFRFSKIEDFAGADIKISFESRNHGDGRPFDGRGGPDGTLAHAFAPT---NGRFHYD 154 (211)
Q Consensus 82 ~~----~~~~~i~~Af~~Ws~v~~l~F~ev~~~~~aDI~I~F~~~~hgd~~~fDG~g~~~g~lAhAf~P~---~G~ihfD 154 (211)
+. +++++|++||++|++|++|+|+||.++ .|||+|+|++++|||++||||+| |+|||||+|. .|+||||
T Consensus 104 ~~l~~~~v~~~~~~Af~~Ws~vt~L~F~ev~~~-~ADI~I~F~~~~Hgd~~pFDG~g---g~LAHAf~P~~g~~Gd~HfD 179 (631)
T 1ck7_A 104 PDLDPETVDDAFARAFQVWSDVTPLRFSRIHDG-EADIMINFGRWEHGDGYPFDGKD---GLLAHAFAPGTGVGGDSHFD 179 (631)
T ss_dssp TTSCHHHHHHHHHHHHHHHHTTSSCEEEECSSS-CCSEEEEEECSSCSSSCCCCSSS---SBCEEECCSSSTTTTCEEEE
T ss_pred CCcCHHHHHHHHHHHHHHHhhccceeEEEccCC-CCCEEEEEecCCCCCcccccCCC---ccccccccCCcccCCccccc
Confidence 54 455678999999999999999999876 99999999999999999999999 9999999995 7999999
Q ss_pred CCCCcccCC
Q 039712 155 ADEPWAVGA 163 (211)
Q Consensus 155 ~de~Wt~~~ 163 (211)
++|.|++++
T Consensus 180 ~dE~Wt~~~ 188 (631)
T 1ck7_A 180 DDELWTLGE 188 (631)
T ss_dssp TTSCEESSS
T ss_pred cccccccCC
Confidence 999999854
No 4
>1slm_A Stromelysin-1; hydrolase, metalloprotease, fibroblast, collagen degradation; 1.90A {Homo sapiens} SCOP: a.20.1.2 d.92.1.11
Probab=100.00 E-value=1.5e-53 Score=366.27 Aligned_cols=187 Identities=37% Similarity=0.570 Sum_probs=163.2
Q ss_pred hHHHHHHHHHHhcCCCccccCCHHHHHHHhCCCCCcccCCCCcccccCccccccccccccccCCCCCCccceeEEeecCC
Q 039712 2 LLESTIKTCQLNFNLKSTGFLDANTVAKMRTPRCGVADIVNGTTRMRSGKKKQQQNNHFHTVSQWPASKFSLTYAFRLGT 81 (211)
Q Consensus 2 ~~~~Ai~~fQ~~~~L~~TG~lD~~T~~~M~~pRCG~pD~~~~~~~~~~~~~~~~~~~~~~~~~kW~~~k~~LTy~i~~~~ 81 (211)
++++|||.||+|+||++||+||++|+++|++|||||||+... .++..+.+|+ |++|||+|.+++
T Consensus 42 ~~~~ai~~~Q~~~~l~~tG~ld~~t~~~m~~pRCgv~d~~~~--------------~~~~~~~kW~--~~~ltY~i~~~~ 105 (255)
T 1slm_A 42 PVVKKIREMQKFLGLEVTGKLDSDTLEVMRKPRCGVPDVGHF--------------RTFPGIPKWR--KTHLTYRIVNYT 105 (255)
T ss_dssp HHHHHHHHHHHHTTCCCCSSCCHHHHHHTTSCBCSSCSSSCC--------------SSCCCCSSCS--CSEEEEEECCCC
T ss_pred HHHHHHHHHHHHcCCCCccccCHHHHHHhcCCCCCcccccce--------------eeccCCCcCC--CCccceEeccCC
Confidence 689999999999999999999999999999999999997532 1334567998 999999999875
Q ss_pred cc----hhHHHHHHHHHHHHccCCcceEeccCCCCcceEEEeeeccCCCCCCCCCCCCCCCccccccCCC---CCccccc
Q 039712 82 RG----DAITPVARAFQTWAANTQFRFSKIEDFAGADIKISFESRNHGDGRPFDGRGGPDGTLAHAFAPT---NGRFHYD 154 (211)
Q Consensus 82 ~~----~~~~~i~~Af~~Ws~v~~l~F~ev~~~~~aDI~I~F~~~~hgd~~~fDG~g~~~g~lAhAf~P~---~G~ihfD 154 (211)
+. +++++|++||+.|+++++|+|+|+.+ ..|||+|.|..+.|||++||||+| |+|||||+|. .|+||||
T Consensus 106 ~~l~~~~~~~~i~~A~~~W~~vt~l~F~e~~~-~~adI~I~f~~~~hgd~~~fdG~~---g~lahA~~P~~~~~G~ihfd 181 (255)
T 1slm_A 106 PDLPKDAVDSAVEKALKVWEEVTPLTFSRLYE-GEADIMISFAVREHGDFYPFDGPG---NVLAHAYAPGPGINGDAHFD 181 (255)
T ss_dssp TTSCHHHHHHHHHHHHHHHHTTSSCEEEECSS-SCCSEEEEEECSCCSSSCCCCSSS---SBCEEECCSSSTTTTCEEEE
T ss_pred CCCCHHHHHHHHHHHHHHHHhcCCeeEEEecC-CCcceeeeeeccCCCCccceeCCC---CeeeeeecCCCCcCceEEeC
Confidence 43 45677899999999999999999985 489999999999999999999999 9999999995 4899999
Q ss_pred CCCCcccCCCCCceeeeeEE-------eeccCCCCCCCC---CcccC-CC--CCCCCHHHHHHHHHhhCC
Q 039712 155 ADEPWAVGAVQGAFDSLKDT-------YIIAPSTAVQNA---PCTAT-VL--WRSLQGDDIQGIKALYNV 211 (211)
Q Consensus 155 ~de~Wt~~~~~~~~~l~~Va-------LGL~HS~~~~~s---p~y~~-~~--~~~L~~dDi~~Iq~LYG~ 211 (211)
++|.|+++. .+.+++.|+ |||.|| ++++| |+|.+ .. ...|+.|||.+||+|||+
T Consensus 182 ~~e~w~~~~--~g~~l~~va~HEiGHaLGL~Hs-~~~~svM~p~y~~~~~~~~~~l~~dDi~~iq~LYG~ 248 (255)
T 1slm_A 182 DDEQWTKDT--TGTNLFLVAAHEIGHSLGLFHS-ANTEALMYPLYHSLTDLTRFRLSQDDINGIQSLYGP 248 (255)
T ss_dssp TTSCEESSS--SSEEHHHHHHHHHHHHTTCCCC-SCTTSTTSSBCCCCSCGGGCCCCHHHHHHHHHHHCC
T ss_pred CCCccccCC--ceeeehhhhHHHHHHHhcCCCC-CCCCcccccccccCCCCCCCCCCHHHHHHHHHHhCC
Confidence 999999864 368888876 999999 99999 66764 11 238999999999999995
No 5
>1su3_A Interstitial collagenase; prodomain, hemopexin domain, exocite, structural proteomics in europe, spine, structural genomics, hydrolase; HET: EPE; 2.20A {Homo sapiens} SCOP: a.20.1.2 b.66.1.1 d.92.1.11 PDB: 2clt_A 1fbl_A*
Probab=100.00 E-value=3.1e-49 Score=363.26 Aligned_cols=188 Identities=36% Similarity=0.546 Sum_probs=160.9
Q ss_pred ChHHHHHHHHHHhcCCCccccCCHHHHHHHhCCCCCcccCCCCcccccCccccccccccccccCCCCCCccceeEEeecC
Q 039712 1 ELLESTIKTCQLNFNLKSTGFLDANTVAKMRTPRCGVADIVNGTTRMRSGKKKQQQNNHFHTVSQWPASKFSLTYAFRLG 80 (211)
Q Consensus 1 e~~~~Ai~~fQ~~~~L~~TG~lD~~T~~~M~~pRCG~pD~~~~~~~~~~~~~~~~~~~~~~~~~kW~~~k~~LTy~i~~~ 80 (211)
+++++||++||+|+||++||+||++|+++|++|||||||+... .++..+.+|. +++|||+|.++
T Consensus 39 ~~~~~ai~~~Q~~~~l~~tG~ld~~t~~~m~~prCg~~d~~~~--------------~~~~~~~~W~--~~~ltY~i~~~ 102 (450)
T 1su3_A 39 GPVVEKLKQMQEFFGLKVTGKPDAETLKVMKQPRCGVPDVAQF--------------VLTEGNPRWE--QTHLTYRIENY 102 (450)
T ss_dssp CHHHHHHHHHHHHTTCCCCSSCCHHHHHHHTSCBCSSCSCC----------------------CCCS--SSEEEEEECCC
T ss_pred HHHHHHHHHHHHHcCCCCccccCHHHHHHhcCCCCCCCCccce--------------eeccCCCcCC--CCcceEEecCC
Confidence 4689999999999999999999999999999999999997421 1233567998 99999999987
Q ss_pred Ccc----hhHHHHHHHHHHHHccCCcceEeccCCCCcceEEEeeeccCCCCCCCCCCCCCCCccccccCCCC---Ccccc
Q 039712 81 TRG----DAITPVARAFQTWAANTQFRFSKIEDFAGADIKISFESRNHGDGRPFDGRGGPDGTLAHAFAPTN---GRFHY 153 (211)
Q Consensus 81 ~~~----~~~~~i~~Af~~Ws~v~~l~F~ev~~~~~aDI~I~F~~~~hgd~~~fDG~g~~~g~lAhAf~P~~---G~ihf 153 (211)
++. +++++|++||+.|++|++|+|+||.+ ..|||+|.|..++|||++||||+| |+|||||+|.. |++||
T Consensus 103 ~~~l~~~~~~~~i~~A~~~W~~vt~l~F~ev~~-~~adI~I~f~~~~hgd~~~fdG~~---g~lahA~~P~~~~~g~~hf 178 (450)
T 1su3_A 103 TPDLPRADVDHAIEKAFQLWSNVTPLTFTKVSE-GQADIMISFVRGDHRDNSPFDGPG---GNLAHAFQPGPGIGGDAHF 178 (450)
T ss_dssp CTTSCHHHHHHHHHHHHHHHHTTSSCEEEECSS-SCCSEEEEEECSCCSSSCCCCSSS---SBCEEECCSSSTTTTCEEE
T ss_pred CCCCCHHHHHHHHHHHHHHHhccCceeEEEecC-CCCCEEEEEeccCCCCccceecCC---CeeeeeecCCCCcCcceEe
Confidence 543 45677899999999999999999975 489999999999999999999999 99999999964 89999
Q ss_pred cCCCCcccCCCCCceeeeeEE-------eeccCCCCCCCC---CcccCCCCCCCCHHHHHHHHHhhCC
Q 039712 154 DADEPWAVGAVQGAFDSLKDT-------YIIAPSTAVQNA---PCTATVLWRSLQGDDIQGIKALYNV 211 (211)
Q Consensus 154 D~de~Wt~~~~~~~~~l~~Va-------LGL~HS~~~~~s---p~y~~~~~~~L~~dDi~~Iq~LYG~ 211 (211)
|++|.|+++. .+.+|+.|+ |||.|+ .+++| |+|.......|+.+||.+||+|||.
T Consensus 179 d~~e~w~~~~--~g~~l~~v~~HE~GH~lGl~H~-~~~~svM~p~y~~~~~~~l~~~Di~~i~~lYg~ 243 (450)
T 1su3_A 179 DEDERWTNNF--REYNLHRVAAHELGHSLGLSHS-TDIGALMYPSYTFSGDVQLAQDDIDGIQAIYGR 243 (450)
T ss_dssp ETTSCCBSSS--SSCBHHHHHHHHHHHHTTCCCC-SCTTSTTSSBCCCCSSCCCCHHHHHHHHHHHCC
T ss_pred ccccccccCc--ceeehhchhhhHHHHhccCCCC-CCCcceeccccccCCcCCCCHHHHHHHHHHhCC
Confidence 9999999863 367888876 999999 99999 5666433338999999999999984
No 6
>3ma2_D Matrix metalloproteinase-14; protein - protein complex, cleavage on PAIR of basic residue disulfide bond, membrane, metal-binding; 2.05A {Homo sapiens} SCOP: d.92.1.11 PDB: 1bqq_M 1buv_M
Probab=100.00 E-value=2.1e-44 Score=295.12 Aligned_cols=144 Identities=32% Similarity=0.517 Sum_probs=126.6
Q ss_pred ccCCCCCCccceeEEeecCCcc----hhHHHHHHHHHHHHccCCcceEeccCC-------CCcceEEEeeeccCCCCCCC
Q 039712 62 TVSQWPASKFSLTYAFRLGTRG----DAITPVARAFQTWAANTQFRFSKIEDF-------AGADIKISFESRNHGDGRPF 130 (211)
Q Consensus 62 ~~~kW~~~k~~LTy~i~~~~~~----~~~~~i~~Af~~Ws~v~~l~F~ev~~~-------~~aDI~I~F~~~~hgd~~~f 130 (211)
.+.||+ |++|||+|.++++. +++++|++||++|++|++|+|+||... ..|||+|.|.++.|||++||
T Consensus 4 ~g~kW~--k~~LTY~i~n~t~~l~~~~v~~ai~~Af~~Ws~vt~L~F~ev~~~~~~~~~~~~ADI~I~F~~~~hgd~~~F 81 (181)
T 3ma2_D 4 QGLKWQ--HNEITFCIQNYTPKVGEYATYEAIRKAFRVWESATPLRFREVPYAYIREGHEKQADIMIFFAEGFHGDSTPF 81 (181)
T ss_dssp CCCCCS--SSEEEEEECCCCTTTCHHHHHHHHHHHHHHHHHHSSCEEEECCHHHHHTTSSCCCSEEEEEECSCCSSSSCC
T ss_pred CCCCCC--CCEEEEEEccCCCCCCHHHHHHHHHHHHHHHHhcCCcceEEcccccccccccccCcEEEEeecccCCCCCcc
Confidence 467997 99999999998754 466778999999999999999999742 48999999999999999999
Q ss_pred CCCCCCCCccccccCCCC---CcccccCCCCcccCCC-CCceeeeeEE-------eeccCCCCCCCC---CcccCCCC-C
Q 039712 131 DGRGGPDGTLAHAFAPTN---GRFHYDADEPWAVGAV-QGAFDSLKDT-------YIIAPSTAVQNA---PCTATVLW-R 195 (211)
Q Consensus 131 DG~g~~~g~lAhAf~P~~---G~ihfD~de~Wt~~~~-~~~~~l~~Va-------LGL~HS~~~~~s---p~y~~~~~-~ 195 (211)
||+| |+|||||+|.. |+||||++|.|+++.. ..+++|+.|| |||.|| .+++| |+|.+... .
T Consensus 82 DG~g---g~lAhAf~P~~~~~Gd~hfd~~e~wt~~~~~~~g~~l~~v~~hE~Gh~lGl~hs-~~~~avM~p~~~~~~~~~ 157 (181)
T 3ma2_D 82 DGEG---GFLAHAYFPGPNIGGDTHFDSAEPWTVRNEDLNGNDIFLVAVHELGHALGLEHS-SDPSAIMAPFYQWMDTEN 157 (181)
T ss_dssp CSSS---SEEEEECCSCSTTTTCEEEETTSCEECTTSCTTSEEHHHHHHHHHHHHTTCCCC-SCTTSTTSSBCCCCCCTT
T ss_pred cCCC---CeeeeccCCCCCCCCceEecCccccccCCCccccceeeeeehhhccccccCCcC-CCCcceeccccccCcCCc
Confidence 9999 99999999964 8999999999998653 2579999997 999999 99999 77775432 3
Q ss_pred -CCCHHHHHHHHHhhCC
Q 039712 196 -SLQGDDIQGIKALYNV 211 (211)
Q Consensus 196 -~L~~dDi~~Iq~LYG~ 211 (211)
+|+.|||++||+|||.
T Consensus 158 ~~l~~dDi~~i~~lYg~ 174 (181)
T 3ma2_D 158 FVLPDDDRRGIQQLYGG 174 (181)
T ss_dssp CCCCHHHHHHHHHHHCC
T ss_pred CCCCHHHHHHHHHHhCC
Confidence 8999999999999995
No 7
>830c_A MMP-13, MMP-13; matrix metalloprotease; HET: RS1; 1.60A {Homo sapiens} SCOP: d.92.1.11 PDB: 456c_A* 1you_A* 4a7b_A* 3tvc_A* 1eub_A* 1xuc_A* 1xud_A* 1xur_A* 2yig_A* 3elm_A* 3i7g_A* 3i7i_A* 3zxh_A* 2ow9_A* 2ozr_A* 3kek_A* 3kej_A* 3kec_A* 2d1n_A* 1fls_A* ...
Probab=100.00 E-value=2.7e-42 Score=279.56 Aligned_cols=144 Identities=35% Similarity=0.585 Sum_probs=125.7
Q ss_pred cccccCCCCCCccceeEEeecCCcc----hhHHHHHHHHHHHHccCCcceEeccCCCCcceEEEeeeccCCCCCCCCCCC
Q 039712 59 HFHTVSQWPASKFSLTYAFRLGTRG----DAITPVARAFQTWAANTQFRFSKIEDFAGADIKISFESRNHGDGRPFDGRG 134 (211)
Q Consensus 59 ~~~~~~kW~~~k~~LTy~i~~~~~~----~~~~~i~~Af~~Ws~v~~l~F~ev~~~~~aDI~I~F~~~~hgd~~~fDG~g 134 (211)
+++...||+ |++|||+|.++++. +++++|++||+.|++|++|+|+||.+ ..|||+|.|.+++|||++||||+|
T Consensus 3 ~~~~~~kW~--k~~LTY~I~n~t~~l~~~~v~~ai~~A~~~Ws~vt~L~F~ev~~-~~AdI~I~F~~~~hgd~~~fdg~g 79 (168)
T 830c_A 3 VFPRTLKWS--KMNLTYRIVNYTPDMTHSEVEKAFKKAFKVWSDVTPLNFTRLHD-GIADIMISFGIKEHGDFYPFDGPS 79 (168)
T ss_dssp ECCSBCCCS--SSEEEEEECSCCTTSCHHHHHHHHHHHHHHHHTTSSCEEEEESS-SCCSEEEEEECSSCSSSCCCCSSS
T ss_pred ccCCCCcCC--CCEEEEEEecCCCCCCHHHHHHHHHHHHHHHHhccCcceeeccC-cccccceeecccccCCcccccCCC
Confidence 455678998 99999999987653 44567899999999999999999986 489999999999999999999999
Q ss_pred CCCCccccccCCC---CCcccccCCCCcccCCCCCceeeeeEE-------eeccCCCCCCCC---CcccCCC-CC-CCCH
Q 039712 135 GPDGTLAHAFAPT---NGRFHYDADEPWAVGAVQGAFDSLKDT-------YIIAPSTAVQNA---PCTATVL-WR-SLQG 199 (211)
Q Consensus 135 ~~~g~lAhAf~P~---~G~ihfD~de~Wt~~~~~~~~~l~~Va-------LGL~HS~~~~~s---p~y~~~~-~~-~L~~ 199 (211)
|+|||||+|. .|+||||++|.|+.+. .+++|+.|| |||.|| .+++| |+|.+.. .. .|++
T Consensus 80 ---g~lAhAf~P~~~~~G~~hfd~~e~w~~~~--~g~~l~~v~~hE~Gh~lGl~h~-~~~~aiM~p~~~~~~~~~~~l~~ 153 (168)
T 830c_A 80 ---GLLAHAFPPGPNYGGDAHFDDDETWTSSS--KGYNLFLVAAHEFGHSLGLDHS-KDPGALMFPIYTYTGKSHFMLPD 153 (168)
T ss_dssp ---SCCEEECCSSSTTTTCEEEETTSCEESSS--SSEEHHHHHHHHHHHHTTBCCC-SCTTSTTSSSCCCC----CCCCH
T ss_pred ---ceeeeccCCCCCCCCceEecccccccccc--CCcchhhhhhhhhcchhcCCCC-CCCcceeccccccCCCCCCCCCH
Confidence 9999999996 4899999999999853 478999987 999999 99999 7777532 23 8999
Q ss_pred HHHHHHHHhhCC
Q 039712 200 DDIQGIKALYNV 211 (211)
Q Consensus 200 dDi~~Iq~LYG~ 211 (211)
|||++||+|||+
T Consensus 154 dDi~~i~~lYg~ 165 (168)
T 830c_A 154 DDVQGIQSLYGP 165 (168)
T ss_dssp HHHHHHHHHHCC
T ss_pred HHHHHHHHHcCC
Confidence 999999999995
No 8
>2ovx_A Matrix metalloproteinase-9 (EC 3.4.24.35) (MMP-9) type IV collagenase) (92 kDa gelatinase)...; S1-prime pocket, hydrolase-hydrola inhibitor complex; HET: 4MR; 2.00A {Homo sapiens} SCOP: d.92.1.11 PDB: 2ovz_A* 2ow0_A* 2ow1_A* 2ow2_A* 1gkd_A* 1gkc_A*
Probab=100.00 E-value=3.3e-38 Score=253.12 Aligned_cols=140 Identities=35% Similarity=0.589 Sum_probs=123.3
Q ss_pred ccCCCCCCccceeEEeecCCcc----hhHHHHHHHHHHHHccCCcceEeccCCCCcceEEEeeeccCCCCCCCCCCCCCC
Q 039712 62 TVSQWPASKFSLTYAFRLGTRG----DAITPVARAFQTWAANTQFRFSKIEDFAGADIKISFESRNHGDGRPFDGRGGPD 137 (211)
Q Consensus 62 ~~~kW~~~k~~LTy~i~~~~~~----~~~~~i~~Af~~Ws~v~~l~F~ev~~~~~aDI~I~F~~~~hgd~~~fDG~g~~~ 137 (211)
.+.||+ |++|||+|.++++. +++++|++||+.|+++++|+|+|+.+. .|||+|.|..++|||++||||+|
T Consensus 3 ~~~~W~--~~~lty~i~~~~~~l~~~~~~~~i~~A~~~W~~~~~l~F~e~~~~-~adI~I~f~~~~~gd~~~fdG~~--- 76 (159)
T 2ovx_A 3 GDLKWH--HHNITYWIQNYSEDLPRAVIDDAFARAFALWSAVTPLTFTRVYSR-DADIVIQFGVAEHGDGYPFDGKD--- 76 (159)
T ss_dssp CSCCCS--CSEEEEEECCCCTTSCHHHHHHHHHHHHHHHHTSSSCEEEECSST-TSSEEEEEECSSCSSSCCCCSSS---
T ss_pred CCCccC--CceEEEEEeCCCCCCCHHHHHHHHHHHHHHHHccCCeeEEEecCC-CCceEEEEeeccCCCCccccCCC---
Confidence 456997 99999999987643 456778999999999999999999865 89999999999999999999999
Q ss_pred CccccccCCC---CCcccccCCCCcccCCCCCceeeeeEE-------eeccCCCCCCCC---CcccCCCCCCCCHHHHHH
Q 039712 138 GTLAHAFAPT---NGRFHYDADEPWAVGAVQGAFDSLKDT-------YIIAPSTAVQNA---PCTATVLWRSLQGDDIQG 204 (211)
Q Consensus 138 g~lAhAf~P~---~G~ihfD~de~Wt~~~~~~~~~l~~Va-------LGL~HS~~~~~s---p~y~~~~~~~L~~dDi~~ 204 (211)
|+|||||+|. .|+||||++|.|+++.. .+.+++.|| |||.|| ++++| |+|.+....+|+.|||++
T Consensus 77 g~la~a~~P~~~~~g~~~fd~~e~w~~~~~-~g~~~~~va~HEiGHaLGL~Hs-~~~~~~m~~~~~~~~~~~l~~~Di~~ 154 (159)
T 2ovx_A 77 GLLAHAFPPGPGIQGDAHFDDDELWSLGKG-QGYSLFLVAAHQFGHALGLDHS-SVPEALMYPMYRFTEGPPLHKDDVNG 154 (159)
T ss_dssp SCCEEECCSSSTTTTCEEEETTSCEECSSS-SSEEHHHHHHHHHHHHTTCCCC-SCTTSTTSSSCCCCCSCSCCHHHHHH
T ss_pred CeEEEEEcCCCCccceEEEccccceecCCC-cccchhhhhhhhhhhhhcCCCC-CCCcceeeccccCCCCCCCCHHHHHH
Confidence 9999999995 69999999999998753 368888886 999999 99999 667754334999999999
Q ss_pred HHHhh
Q 039712 205 IKALY 209 (211)
Q Consensus 205 Iq~LY 209 (211)
||+||
T Consensus 155 iq~LY 159 (159)
T 2ovx_A 155 IRHLY 159 (159)
T ss_dssp HHHHC
T ss_pred HHHhC
Confidence 99999
No 9
>2xs4_A Karilysin protease; hydrolase, bacterial MMP, virulence factor, metalloprotease, dependent, peptidase; 1.70A {Tannerella forsythia} PDB: 2xs3_A
Probab=100.00 E-value=1.3e-37 Score=251.14 Aligned_cols=141 Identities=35% Similarity=0.620 Sum_probs=123.1
Q ss_pred ccCCCCCCccceeEEeecCCcc----hhHHHHHHHHHHHHccCCcceEeccCCCCcceEEEeeeccCCCCCCCCCCCCCC
Q 039712 62 TVSQWPASKFSLTYAFRLGTRG----DAITPVARAFQTWAANTQFRFSKIEDFAGADIKISFESRNHGDGRPFDGRGGPD 137 (211)
Q Consensus 62 ~~~kW~~~k~~LTy~i~~~~~~----~~~~~i~~Af~~Ws~v~~l~F~ev~~~~~aDI~I~F~~~~hgd~~~fDG~g~~~ 137 (211)
.+.||+ +++|||+|.++++. +++++|++||+.|+++++|+|+||.+...|||+|.|..+.|||++||||+|
T Consensus 4 ~~~~W~--~~~lty~i~~~~~~l~~~~~~~~i~~A~~~W~~~~~l~F~~v~~~~~adI~I~f~~~~~gd~~~~dG~~--- 78 (167)
T 2xs4_A 4 QGSKWN--KTTLKYYIYNSSSHLTTTERENAIRSAFALWSDKSTLSFIQVYNPNQADIKIKWEKGNHGDGYPFDGNT--- 78 (167)
T ss_dssp CSCCCS--SSEEEEEECCCCCSSCHHHHHHHHHHHHHHHHHTSSCEEEECSCGGGCSEEEEEECSCCSSSCCTTSSS---
T ss_pred cCCcCC--CCeEEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCceEEEeCCCCCCcEEEEEeccCCCCCcceecCC---
Confidence 456998 99999999887542 456778999999999999999999755689999999999999999999999
Q ss_pred CccccccCCC------CCcccccCCCCcccCCCCCceeeeeEE-------eeccCCCCCCCC---CcccCCCCCCCCHHH
Q 039712 138 GTLAHAFAPT------NGRFHYDADEPWAVGAVQGAFDSLKDT-------YIIAPSTAVQNA---PCTATVLWRSLQGDD 201 (211)
Q Consensus 138 g~lAhAf~P~------~G~ihfD~de~Wt~~~~~~~~~l~~Va-------LGL~HS~~~~~s---p~y~~~~~~~L~~dD 201 (211)
|+|||||+|. .|+||||.+|.|+++. .+.+++.|+ |||.|+ ++++| |+|.... ..|+.||
T Consensus 79 g~la~a~~P~~~~~~~~g~~~fd~~e~w~~~~--~g~~~~~v~~HEiGHaLGL~H~-~~~~svM~~~~~~~~-~~l~~~D 154 (167)
T 2xs4_A 79 GILAHAFYPPPAGGNYAGHLHFDDDENWSING--SGIDLITVAAHEIGHLLGIEHS-NVSSALMYPYYTGIK-RQLDNDD 154 (167)
T ss_dssp CCSEEECCSTTTTGGGTTEEEEETTSCEESSS--SSEEHHHHHHHHHHHHHTBCCC-SCTTSTTSSSCCSCC-CSCCHHH
T ss_pred CeEEEEECCCCccCcccceEEECCccccccCC--CccchhhhHHHHHHHhhcCCCC-CCCCceeccccCCCC-CCCCHHH
Confidence 9999999993 6999999999999864 468888886 999999 99999 5566422 3899999
Q ss_pred HHHHHHhhCC
Q 039712 202 IQGIKALYNV 211 (211)
Q Consensus 202 i~~Iq~LYG~ 211 (211)
|.+||+|||+
T Consensus 155 i~~iq~lYg~ 164 (167)
T 2xs4_A 155 CLAVWDLYGY 164 (167)
T ss_dssp HHHHHHHHCC
T ss_pred HHHHHHHhCC
Confidence 9999999995
No 10
>3ayu_A 72 kDa type IV collagenase; protease, hydrolase-hydrolase inhibitor complex; 2.00A {Homo sapiens} PDB: 1qib_A 1hov_A*
Probab=100.00 E-value=5.7e-37 Score=247.87 Aligned_cols=145 Identities=39% Similarity=0.603 Sum_probs=126.4
Q ss_pred cccccCCCCCCccceeEEeecCCcc----hhHHHHHHHHHHHHccCCcceEeccCCCCcceEEEeeeccCCCCCCCCCCC
Q 039712 59 HFHTVSQWPASKFSLTYAFRLGTRG----DAITPVARAFQTWAANTQFRFSKIEDFAGADIKISFESRNHGDGRPFDGRG 134 (211)
Q Consensus 59 ~~~~~~kW~~~k~~LTy~i~~~~~~----~~~~~i~~Af~~Ws~v~~l~F~ev~~~~~aDI~I~F~~~~hgd~~~fDG~g 134 (211)
++..+.||+ +++|||+|.++++. +++++|++||+.|+++++|+|+||.+. .|||+|.|..++|||++||||++
T Consensus 3 ~~~~~~~W~--~~~lty~i~~~~~~l~~~~~~~~i~~A~~~W~~vt~l~F~ev~~~-~adI~I~f~~~~~gd~~~fdG~~ 79 (167)
T 3ayu_A 3 FFPRKPKWD--KNQITYRIIGYTPDLDPETVDDAFARAFQVWSDVTPLRFSRIHDG-EADIMINFGRWEHGDGYPFDGKD 79 (167)
T ss_dssp ECTTCCCCS--SSEEEEEECCCCTTSCHHHHHHHHHHHHHHHHTSSSCEEEECSSS-CCSEEEEEECSSCSSSCCCCSSS
T ss_pred cCCCCCccC--CceEEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCCeeEEEecCC-CceEEEEEeccCCCCcccccCCC
Confidence 455678998 99999999987642 556778999999999999999999865 89999999999999999999999
Q ss_pred CCCCccccccCCC---CCcccccCCCCcccCCCCCceeeeeEE-------eeccCCCCCCCC---CcccCCCCCCCCHHH
Q 039712 135 GPDGTLAHAFAPT---NGRFHYDADEPWAVGAVQGAFDSLKDT-------YIIAPSTAVQNA---PCTATVLWRSLQGDD 201 (211)
Q Consensus 135 ~~~g~lAhAf~P~---~G~ihfD~de~Wt~~~~~~~~~l~~Va-------LGL~HS~~~~~s---p~y~~~~~~~L~~dD 201 (211)
|+|||||+|. .|+||||.+|.|+++.. .+.+++.|+ |||.|+ .+++| |+|.+.....|+.+|
T Consensus 80 ---g~la~a~~P~~~~~G~~~fd~~e~w~~~~~-~g~~~~~~~~HE~gH~lGl~H~-~~~~svM~p~~~~~~~~~l~~~D 154 (167)
T 3ayu_A 80 ---GLLAHAFAPGTGVGGDSHFDDDELWTLGKG-VGYSLFLVAAHAFGHAMGLEHS-QDPGALMAPIYTYTKNFRLSQDD 154 (167)
T ss_dssp ---SCCEEEECSSSTTTTCEEEETTSCEESSCS-SSEEHHHHHHHHHHHHTTEECC-SCTTSTTSSBCCCCSSCCCCHHH
T ss_pred ---ceeEEEECCCCCcCCceEEcceeeeecCCC-cCccceeehhhhhHHhccCCCC-CCCCccccccccCCCCCCCCHHH
Confidence 9999999995 68999999999998753 368888776 999999 99998 667754334899999
Q ss_pred HHHHHHhhCC
Q 039712 202 IQGIKALYNV 211 (211)
Q Consensus 202 i~~Iq~LYG~ 211 (211)
|.+||+|||+
T Consensus 155 i~~iq~lYg~ 164 (167)
T 3ayu_A 155 IKGIQELYGA 164 (167)
T ss_dssp HHHHHHHHCC
T ss_pred HHHHHHHhCc
Confidence 9999999995
No 11
>1rm8_A MMP-16, matrix metalloproteinase-16, MT3-MMP; membrane type - matrix metalloproteinase, batimastat, hydroxamate inhibitor, protease, hydrolase; HET: BAT; 1.80A {Homo sapiens} SCOP: d.92.1.11
Probab=100.00 E-value=1.8e-36 Score=244.89 Aligned_cols=142 Identities=34% Similarity=0.601 Sum_probs=122.4
Q ss_pred CCCCCCccceeEEeecCCcc----hhHHHHHHHHHHHHccCCcceEecc------CCCCcceEEEeeeccCCCCCCCCCC
Q 039712 64 SQWPASKFSLTYAFRLGTRG----DAITPVARAFQTWAANTQFRFSKIE------DFAGADIKISFESRNHGDGRPFDGR 133 (211)
Q Consensus 64 ~kW~~~k~~LTy~i~~~~~~----~~~~~i~~Af~~Ws~v~~l~F~ev~------~~~~aDI~I~F~~~~hgd~~~fDG~ 133 (211)
.||+ |++|||+|.++++. +++++|++||+.|+++++|+|+||. +...|||+|.|..+.|||++||||+
T Consensus 2 ~kW~--~~~lTY~i~~~~~~~~~~~~~~~i~~A~~~W~~v~~l~F~ev~~~~~~~~~~~adI~i~f~~~~~gd~~~fdG~ 79 (169)
T 1rm8_A 2 QKWQ--HKHITYSIKNVTPKVGDPETRKAIRRAFDVWQNVTPLTFEEVPYSELENGKRDVDITIIFASGFHGDSSPFDGE 79 (169)
T ss_dssp CCCS--SSEEEEEECCCCTTTCHHHHHHHHHHHHHHHHTTSSCEEEECCTTCCCSSSCCCSEEEEEESSCCSSSCCCCSS
T ss_pred CCCC--CCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHhcCCceeEEeccccccCCCCCCCEEEEEeeccccccceecCC
Confidence 5897 99999999987542 5667789999999999999999997 4568999999999999999999999
Q ss_pred CCCCCccccccCCC---CCcccccCCCCcccCC-CCCceeeeeEE-------eeccCCCCCCCC---CcccCCCC-C-CC
Q 039712 134 GGPDGTLAHAFAPT---NGRFHYDADEPWAVGA-VQGAFDSLKDT-------YIIAPSTAVQNA---PCTATVLW-R-SL 197 (211)
Q Consensus 134 g~~~g~lAhAf~P~---~G~ihfD~de~Wt~~~-~~~~~~l~~Va-------LGL~HS~~~~~s---p~y~~~~~-~-~L 197 (211)
| |+|||||+|. .|++|||.+|.|+++. ...+.+++.|+ |||.|+ .++.+ |+|.+... . .|
T Consensus 80 ~---g~la~a~~P~~g~~g~~~fd~~e~w~~~~~~~~g~~~~~~~~he~gh~lgl~h~-~~~~~~m~~~~~~~~~~~~~l 155 (169)
T 1rm8_A 80 G---GFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHS-NDPTAIMAPFYQYMETDNFKL 155 (169)
T ss_dssp S---SCCEEECCSCSTTTTCEEEETTSCEESSCCSSSSEEHHHHHHHHHHHHHTCCCC-SCTTSTTSSSCCCCCCTTCCC
T ss_pred C---CEEEEEEeecCCccceEEEcCCCcceecCCCCccceeeeehhhhhhhhcCCCCC-CCCCCEeecccccCCCCCCCC
Confidence 9 9999999995 4799999999999864 23467888876 999999 99998 55654332 2 89
Q ss_pred CHHHHHHHHHhhCC
Q 039712 198 QGDDIQGIKALYNV 211 (211)
Q Consensus 198 ~~dDi~~Iq~LYG~ 211 (211)
+.+||.+||+|||+
T Consensus 156 ~~~Di~~iq~lYg~ 169 (169)
T 1rm8_A 156 PNDDLQGIQKIYGP 169 (169)
T ss_dssp CHHHHHHHHHHHCC
T ss_pred CHHHHHHHHHHhCC
Confidence 99999999999996
No 12
>2y6d_A Matrilysin; hydrolase; HET: TQJ; 1.60A {Homo sapiens} PDB: 2ddy_A* 1mmq_A* 1mmp_A* 1mmr_A* 2y6c_A*
Probab=100.00 E-value=1.5e-36 Score=246.95 Aligned_cols=147 Identities=35% Similarity=0.537 Sum_probs=123.0
Q ss_pred cccccccCCCCCCccceeEEeecCCcc----hhHHHHHHHHHHHHccCCcceEeccCCCCcceEEEeeeccCCCCCCCCC
Q 039712 57 NNHFHTVSQWPASKFSLTYAFRLGTRG----DAITPVARAFQTWAANTQFRFSKIEDFAGADIKISFESRNHGDGRPFDG 132 (211)
Q Consensus 57 ~~~~~~~~kW~~~k~~LTy~i~~~~~~----~~~~~i~~Af~~Ws~v~~l~F~ev~~~~~aDI~I~F~~~~hgd~~~fDG 132 (211)
|+++..+.||+ +++|||+|.++++. +++++|++||+.|+++++|+|+||.. ..|||+|.|..+.|||++||||
T Consensus 2 ~~~~~~~~~W~--~~~ltY~i~~~~~~l~~~~~~~~i~~A~~~W~~vt~l~F~ev~~-~~adI~I~f~~~~hgd~~~fdG 78 (174)
T 2y6d_A 2 YSLFPNSPKWT--SKVVTYRIVSYTRDLPHITVDRLVSKALNMWGKEIPLHFRKVVW-GTADIMIGFARGAHGDSYPFDG 78 (174)
T ss_dssp CCBCTTCCCCC--SSEEEEEECCCCTTSCHHHHHHHHHHHHHHHHTTSSCEEEECCS-SCCSEEEEEECSCCSSSCCCCS
T ss_pred ceeCCCCCccC--CCEEEEEEeCCCCCCCHHHHHHHHHHHHHHHHhccCeeEEEecC-CCccEEEEEeecCCCCccceeC
Confidence 45667788998 99999999886543 45677899999999999999999984 5899999999999999999999
Q ss_pred CCCCCCccccccCCCC---CcccccCCCCcccCCCCCceeeeeEE-------eeccCCCCCCCC---CcccCCC--CCCC
Q 039712 133 RGGPDGTLAHAFAPTN---GRFHYDADEPWAVGAVQGAFDSLKDT-------YIIAPSTAVQNA---PCTATVL--WRSL 197 (211)
Q Consensus 133 ~g~~~g~lAhAf~P~~---G~ihfD~de~Wt~~~~~~~~~l~~Va-------LGL~HS~~~~~s---p~y~~~~--~~~L 197 (211)
+| |+|||||+|.. |+||||.+|.|+++.. .+.+++.|+ |||.|+ .+++| |+|.... ...|
T Consensus 79 ~~---g~la~a~~P~~~~~g~i~fd~~e~w~~~~~-~g~~~~~~~~HE~gH~lGl~h~-~~~~svM~~~~~~~~~~~~~l 153 (174)
T 2y6d_A 79 PG---NTLAHAFAPGTGLGGDAHFDEDERWTDGSS-LGINFLYAATHELGHSLGMGHS-SDPNAVMYPTYGNGDPQNFKL 153 (174)
T ss_dssp SS---SCCEEECCSSSTTTTCEEEETTSCEESSSS-SSEEHHHHHHHHHHHHHTBCCC-SCTTSTTSSCC-------CCC
T ss_pred CC---CeeEEeecCCCCccceEEeccccccccCCC-CCceeeehhhHHhHhhhcCCCC-CCCCcEecccccCCCccCCCC
Confidence 99 99999999965 9999999999998643 368888876 999999 99999 4455322 2389
Q ss_pred CHHHHHHHHHhhCC
Q 039712 198 QGDDIQGIKALYNV 211 (211)
Q Consensus 198 ~~dDi~~Iq~LYG~ 211 (211)
+.+||.+||+|||.
T Consensus 154 ~~~Di~~i~~lYg~ 167 (174)
T 2y6d_A 154 SQDDIKGIQKLYGK 167 (174)
T ss_dssp CHHHHHHHHHHC--
T ss_pred CHHHHHHHHHHhCc
Confidence 99999999999984
No 13
>1y93_A Macrophage metalloelastase; matrix metalloproteinase, MMP12, complex (elastase inhibitor), acetohydroxamic acid, hydrola; 1.03A {Homo sapiens} SCOP: d.92.1.11 PDB: 1rmz_A 1ycm_A* 1z3j_A* 2hu6_A* 2oxu_A 2oxw_A 2oxz_A 3lik_A* 3lil_A* 3lir_A* 3ljg_A* 1os9_A 1os2_A 3f17_A* 3ehy_A* 3ehx_A* 3f15_A* 3f16_A* 3f18_A* 3f19_A* ...
Probab=100.00 E-value=2.1e-36 Score=242.66 Aligned_cols=139 Identities=37% Similarity=0.612 Sum_probs=121.1
Q ss_pred cCCCCCCccceeEEeecCCcc----hhHHHHHHHHHHHHccCCcceEeccCCCCcceEEEeeeccCCCCCCCCCCCCCCC
Q 039712 63 VSQWPASKFSLTYAFRLGTRG----DAITPVARAFQTWAANTQFRFSKIEDFAGADIKISFESRNHGDGRPFDGRGGPDG 138 (211)
Q Consensus 63 ~~kW~~~k~~LTy~i~~~~~~----~~~~~i~~Af~~Ws~v~~l~F~ev~~~~~aDI~I~F~~~~hgd~~~fDG~g~~~g 138 (211)
+.||+ |++|||+|.++++. +++++|++||+.|+++++|+|+|+.+ ..|||+|.|..++|||++||||+| |
T Consensus 2 g~kW~--~~~ltY~i~~~~~~l~~~~~~~~i~~A~~~W~~~t~l~F~e~~~-~~adI~I~f~~~~~gd~~~fdG~~---g 75 (159)
T 1y93_A 2 GPVWR--KHYITYRINNYTPDMNREDVDYAIRKAFQVWSNVTPLKFSKINT-GMADILVVFARGAHGDDHAFDGKG---G 75 (159)
T ss_dssp CCCCS--SSEEEEEECCCCTTSCHHHHHHHHHHHHHHHHTTSSCEEEECSS-SCCSEEEEEECSCCSSSCCCCSSS---S
T ss_pred CCccc--CCEEEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCceEEEecC-CCccEEEEEEecccCCcccccCCC---C
Confidence 46898 99999999987543 45577899999999999999999985 489999999999999999999999 9
Q ss_pred ccccccCCCC---CcccccCCCCcccCCCCCceeeeeEE-------eeccCCCCCCCC---CcccCCCC--CCCCHHHHH
Q 039712 139 TLAHAFAPTN---GRFHYDADEPWAVGAVQGAFDSLKDT-------YIIAPSTAVQNA---PCTATVLW--RSLQGDDIQ 203 (211)
Q Consensus 139 ~lAhAf~P~~---G~ihfD~de~Wt~~~~~~~~~l~~Va-------LGL~HS~~~~~s---p~y~~~~~--~~L~~dDi~ 203 (211)
+|||||+|.. |+||||++|.|+++. .+.+++.|+ |||.|+ .+++| |+|.+... ..|+.|||.
T Consensus 76 ~la~a~~P~~~~~g~~~fd~~~~w~~~~--~g~~~~~~~~HE~GH~lGl~H~-~~~~~~m~p~~~~~~~~~~~l~~~Di~ 152 (159)
T 1y93_A 76 ILAHAFGPGSGIGGDAHFDEDEFWTTHS--GGTNLFLTAVHEIGHSLGLGHS-SDPKAVMFPTYKYVDINTFRLSADDIR 152 (159)
T ss_dssp CCEEECCSCSTTTTCEEEETTSCEESSS--SSEEHHHHHHHHHHHHTTCCCC-SCTTSTTSSSCCCCCGGGCCCCHHHHH
T ss_pred eEEEEecCCCCcCceEEECCccccccCc--ccchhhhhhhhhhhhhhcCCCC-CCCCceeccccccCcCCCCCCCHHHHH
Confidence 9999999954 899999999999864 367888876 999999 99998 66764332 289999999
Q ss_pred HHHHhhC
Q 039712 204 GIKALYN 210 (211)
Q Consensus 204 ~Iq~LYG 210 (211)
+||+|||
T Consensus 153 ~iq~lYG 159 (159)
T 1y93_A 153 GIQSLYG 159 (159)
T ss_dssp HHHTTCC
T ss_pred HHHHhcC
Confidence 9999998
No 14
>1hv5_A Stromelysin 3; inhibition, phosphinic inhibitor, hydrolase; HET: CPS RXP; 2.60A {Mus musculus} SCOP: d.92.1.11
Probab=100.00 E-value=2.2e-36 Score=243.66 Aligned_cols=141 Identities=37% Similarity=0.569 Sum_probs=121.2
Q ss_pred cCCCCCCccceeEEeecCCcc----hhHHHHHHHHHHHHccCCcceEeccCCCCcceEEEeeeccCCCCCCCCCCCCCCC
Q 039712 63 VSQWPASKFSLTYAFRLGTRG----DAITPVARAFQTWAANTQFRFSKIEDFAGADIKISFESRNHGDGRPFDGRGGPDG 138 (211)
Q Consensus 63 ~~kW~~~k~~LTy~i~~~~~~----~~~~~i~~Af~~Ws~v~~l~F~ev~~~~~aDI~I~F~~~~hgd~~~fDG~g~~~g 138 (211)
+.||+ |++|||+|.++++. +++++|++||+.|+++++|+|+|+.+. .|||+|.|..+.|||++||||+| |
T Consensus 6 ~~~W~--~~~ltY~i~~~~~~~~~~~~~~~i~~A~~~W~~~t~l~F~e~~~~-~adI~i~f~~~~~gd~~~fdg~~---g 79 (165)
T 1hv5_A 6 GGRWE--KTDLTYRILRFPWQLVREQVRQTVAEALQVWSEVTPLTFTEVHEG-RADIMIDFARYWHGDNLPFDGPG---G 79 (165)
T ss_dssp TTEEE--ECEEEEEECSCCTTSCHHHHHHHHHHHHHHHHTTSSCEEEECSSS-BCSEEEEEECSCSSSSCCCCSSS---S
T ss_pred CCCCC--CCeEEEEEeCCCCCCCHHHHHHHHHHHHHHHHcccCeeEEEecCC-CccEEEEEeecccCCCCcccCCc---c
Confidence 45997 99999999987543 445678999999999999999999864 79999999999999999999999 9
Q ss_pred ccccccCCC---CCcccccCCCCcccCCCCCceeeeeEE-------eeccCCCCCCCC---CcccCCCCCCCCHHHHHHH
Q 039712 139 TLAHAFAPT---NGRFHYDADEPWAVGAVQGAFDSLKDT-------YIIAPSTAVQNA---PCTATVLWRSLQGDDIQGI 205 (211)
Q Consensus 139 ~lAhAf~P~---~G~ihfD~de~Wt~~~~~~~~~l~~Va-------LGL~HS~~~~~s---p~y~~~~~~~L~~dDi~~I 205 (211)
+|||||+|. .|+||||.+|.|+++... +.+++.|+ |||.|+ .++.| |+|.+..+..|+.+||.+|
T Consensus 80 ~la~A~~P~~~~~g~~~~d~~~~w~~~~~~-g~~~~~v~~HEiGHaLGL~H~-~~~~svM~~~~~~~~~~~l~~~Di~~i 157 (165)
T 1hv5_A 80 ILAHAFFPKTHREGDVHFDYDETWTIGDNQ-GTDLLQVAAHEFGHVLGLQHT-TAAKALMSPFYTFRYPLSLSPDDRRGI 157 (165)
T ss_dssp CCEEEECCTTSSSEEEEEETTSCEESSCSS-SEEHHHHHHHHHHHHTTCCCC-SCTTSTTCSSCCCCSSCCCCHHHHHHH
T ss_pred eEEEeeCCCCCcCccEEEccccceecCCcc-CchhhhhHHHHhHhhhCCCCC-CCCCceecccccCCCCCCCCHHHHHHH
Confidence 999999996 589999999999987533 67888776 999999 99999 4444333349999999999
Q ss_pred HHhhCC
Q 039712 206 KALYNV 211 (211)
Q Consensus 206 q~LYG~ 211 (211)
|+|||+
T Consensus 158 q~LYg~ 163 (165)
T 1hv5_A 158 QHLYGR 163 (165)
T ss_dssp HHHCC-
T ss_pred HHHhCC
Confidence 999995
No 15
>1kap_P Alkaline protease; calcium binding protein, zinc metalloprotease; 1.64A {Pseudomonas aeruginosa} SCOP: b.80.7.1 d.92.1.6 PDB: 1jiw_P 1akl_A
Probab=100.00 E-value=2.1e-37 Score=286.51 Aligned_cols=177 Identities=17% Similarity=0.215 Sum_probs=138.1
Q ss_pred hHHHHHHHHHHhcCCCccccCCHHHHHHHhCCCCCcccCCCCcccccCccccccccccccccCCCCCC----ccceeEEe
Q 039712 2 LLESTIKTCQLNFNLKSTGFLDANTVAKMRTPRCGVADIVNGTTRMRSGKKKQQQNNHFHTVSQWPAS----KFSLTYAF 77 (211)
Q Consensus 2 ~~~~Ai~~fQ~~~~L~~TG~lD~~T~~~M~~pRCG~pD~~~~~~~~~~~~~~~~~~~~~~~~~kW~~~----k~~LTy~i 77 (211)
.+++|||+||+|++||+|| +|+++|++||||+||+... ++..+.||... +++|||+|
T Consensus 10 ~~~~a~~~~Q~f~~l~~tG----~t~~~m~~Prcgv~d~~~~---------------~~~~~~kW~~~~~~~~~~LTYsf 70 (479)
T 1kap_P 10 GRSDAYTQVDNFLHAYARG----GDELVNGHPSYTVDQAAEQ---------------ILREQASWQKAPGDSVLTLSYSF 70 (479)
T ss_dssp CCCHHHHHHHHHHTTTCCC----SSSEETTEECCCHHHHHHH---------------HTTTCCCCCCCTTCSSEEEEEEE
T ss_pred HHHHHHHHHHHHcCCCccC----hhhHhhCCCCCCCccHHHh---------------hccCCCCCCCCCCCCccEEEEEE
Confidence 4568999999999999999 7999999999999997310 12345699721 47999999
Q ss_pred ecCCcc-----------------------hhHHHHHHHHHHHHccCCcceEeccCCCCcceEEEeeeccCCCCCCCCCCC
Q 039712 78 RLGTRG-----------------------DAITPVARAFQTWAANTQFRFSKIEDFAGADIKISFESRNHGDGRPFDGRG 134 (211)
Q Consensus 78 ~~~~~~-----------------------~~~~~i~~Af~~Ws~v~~l~F~ev~~~~~aDI~I~F~~~~hgd~~~fDG~g 134 (211)
.++++. +++++|++||++|++|++|+|+||.+...|||+|.| |+|++
T Consensus 71 ~~~~~~~~~~~~~~~~d~~~~~~f~~ls~~~~~~i~~Af~~Ws~vt~L~F~ev~~~~~AdI~i~f----------~~g~~ 140 (479)
T 1kap_P 71 LTKPNDFFNTPWKYVSDIYSLGKFSAFSAQQQAQAKLSLQSWSDVTNIHFVDAGQGDQGDLTFGN----------FSSSV 140 (479)
T ss_dssp CSSCCHHHHCGGGTCSSCSCCCCCBCCCHHHHHHHHHHHHHHHTTBSEEEEEEEESSCSSEEEEE----------ECSCC
T ss_pred ECCCcccccCccccccccccccccccCCHHHHHHHHHHHHHHhcccCeeEEEcCCCCCccEEEEE----------ecCCC
Confidence 876421 356778999999999999999999876689999999 45788
Q ss_pred CCCCccccccCCCC-----CcccccCCCCcccCCCC-CceeeeeEE-------eeccCCCCCCCC----CcccC----CC
Q 039712 135 GPDGTLAHAFAPTN-----GRFHYDADEPWAVGAVQ-GAFDSLKDT-------YIIAPSTAVQNA----PCTAT----VL 193 (211)
Q Consensus 135 ~~~g~lAhAf~P~~-----G~ihfD~de~Wt~~~~~-~~~~l~~Va-------LGL~HS~~~~~s----p~y~~----~~ 193 (211)
|++||||+|.. |++||+.++.|+..... .+..++.|+ |||.|| +++++ |+|.. .+
T Consensus 141 ---G~lA~A~~P~~g~~~~g~~~~~~~~~~~~~~~~~~g~~~~~va~HEIGHaLGL~Hs-~~~~a~m~~p~y~~~~~~~d 216 (479)
T 1kap_P 141 ---GGAAFAFLPDVPDALKGQSWYLINSSYSANVNPANGNYGRQTLTHEIGHTLGLSHP-GDYNAGEGDPTYADATYAED 216 (479)
T ss_dssp ---SSSEEECCTTSCTTTTTEEEEECSSSCCTTTSCCTTSHHHHHHHHHHHHHHTCCCS-SSCCTTSSCCCGGGCSSTTC
T ss_pred ---CccEEEECCCCCCccCCceEEecccccccccCCCCCcccceeehhhhhhhhccCCC-CCcccccccccccccccccC
Confidence 99999999954 58999999999754321 223345554 999999 98876 66652 01
Q ss_pred C-----------------------CCCCHHHHHHHHHhhCC
Q 039712 194 W-----------------------RSLQGDDIQGIKALYNV 211 (211)
Q Consensus 194 ~-----------------------~~L~~dDi~~Iq~LYG~ 211 (211)
. ..++.+||.+||+|||+
T Consensus 217 ~~~~svMsY~~~~~~~~~~~~~y~~~~~~~Di~aiq~lYG~ 257 (479)
T 1kap_P 217 TRAYSVMSYWEEQNTGQDFKGAYSSAPLLDDIAAIQKLYGA 257 (479)
T ss_dssp STTTCTTCCSCGGGGTCBCTTCCCSSCCHHHHHHHHHHHCB
T ss_pred CcceeEEeecccccCCccccccccCCCCcchhhhhhccccc
Confidence 0 12479999999999994
No 16
>1i76_A MMP-8;, neutrophil collagenase; hydrolase, complex (metalloprotease/inhibitor); HET: BSI; 1.20A {Homo sapiens} SCOP: d.92.1.11 PDB: 1i73_A* 1jao_A* 1jap_A 1jaq_A* 1jj9_A* 1mmb_A* 1zp5_A* 1zs0_A* 1zvx_A* 3dng_A* 3dpe_A* 3dpf_A* 1kbc_A* 1jan_A* 1bzs_A* 1mnc_A* 2oy2_A 1a86_A* 1jh1_A* 1a85_A ...
Probab=100.00 E-value=8.1e-36 Score=240.10 Aligned_cols=142 Identities=36% Similarity=0.609 Sum_probs=122.6
Q ss_pred ccccCCCCCCccceeEEeecCCcc----hhHHHHHHHHHHHHccCCcceEeccCCCCcceEEEeeeccCCCCCCCCCCCC
Q 039712 60 FHTVSQWPASKFSLTYAFRLGTRG----DAITPVARAFQTWAANTQFRFSKIEDFAGADIKISFESRNHGDGRPFDGRGG 135 (211)
Q Consensus 60 ~~~~~kW~~~k~~LTy~i~~~~~~----~~~~~i~~Af~~Ws~v~~l~F~ev~~~~~aDI~I~F~~~~hgd~~~fDG~g~ 135 (211)
+..+.||+ +++|||+|.++++. +++++|++||+.|+++++|+|+|+.+ ..|||+|.|..+.|||++||||+|
T Consensus 3 ~~~~~~W~--~~~ltY~i~~~~~~~~~~~~~~~i~~A~~~W~~~t~l~F~e~~~-~~adI~I~f~~~~~g~~~~fdG~~- 78 (163)
T 1i76_A 3 TPGNPKWE--RTNLTYRIRNYTPQLSEAEVERAIKDAFELWSVASPLIFTRISQ-GEADINIAFYQRDHGDNSPFDGPN- 78 (163)
T ss_dssp CTTCCCCS--CSEEEEEECCCCTTSCHHHHHHHHHHHHHHHHTTSSCEEEECSS-SCCSEEEEEECSCCSSSCCCCSSS-
T ss_pred cCCCCccC--CcEEEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCCcceEEecc-cccceEEEEeecCCCCcccccCCC-
Confidence 44567998 99999999987642 45677899999999999999999975 489999999999999999999999
Q ss_pred CCCccccccCCCC---CcccccCCCCcccCCCCCceeeeeEE-------eeccCCCCCCCC---CcccCCC--CCCCCHH
Q 039712 136 PDGTLAHAFAPTN---GRFHYDADEPWAVGAVQGAFDSLKDT-------YIIAPSTAVQNA---PCTATVL--WRSLQGD 200 (211)
Q Consensus 136 ~~g~lAhAf~P~~---G~ihfD~de~Wt~~~~~~~~~l~~Va-------LGL~HS~~~~~s---p~y~~~~--~~~L~~d 200 (211)
|+|||||+|.. |+||||++|.|+++. .+.+++.|+ |||.|+ .++++ |+|.+.. ...|+.|
T Consensus 79 --g~la~a~~p~~~~~g~~~~d~~~~w~~~~--~g~~~~~v~~HE~GHalGl~H~-~~~~~~m~p~~~~~~~~~~~l~~~ 153 (163)
T 1i76_A 79 --GILAHAFQPGQGIGGDAHFDAEETWTNTS--ANYNLFLVAAHEFGHSLGLAHS-SDPGALMYPNYAFRETSNYSLPQD 153 (163)
T ss_dssp --SCCEEECCSSSTTTTCEEEETTSCCBSSS--SSCBHHHHHHHHHHHHHTBCCC-SCTTSTTSSSCCCCCCTTCCCCHH
T ss_pred --CeEEEEecCCCCccceEEeCCccccccCc--ccchhhhhhHHHhhhhhcCCCC-CCCCcccccccccCCCCCCCCCHH
Confidence 99999999954 899999999999863 367887776 999999 99998 6676432 2389999
Q ss_pred HHHHHHHhhC
Q 039712 201 DIQGIKALYN 210 (211)
Q Consensus 201 Di~~Iq~LYG 210 (211)
||.+||+|||
T Consensus 154 Di~~i~~lYG 163 (163)
T 1i76_A 154 DIDGIQAIYG 163 (163)
T ss_dssp HHHHHHHHHC
T ss_pred HHHHHHHhhC
Confidence 9999999998
No 17
>1k7i_A PROC, secreted protease C; metalloprotease, hydrolase; 1.59A {Erwinia chrysanthemi} SCOP: b.80.7.1 d.92.1.6 PDB: 1k7g_A 1k7q_A 1go8_P 3hbv_P 3hda_P 3hbu_P 1go7_P 3hb2_P
Probab=100.00 E-value=2.6e-37 Score=285.86 Aligned_cols=181 Identities=17% Similarity=0.209 Sum_probs=142.4
Q ss_pred HHHHHHHHHHhcCCCccccCCHHHHHHHhCCCCCcccCCCCcccccCccccccccccccccCCCC-----CCccceeEEe
Q 039712 3 LESTIKTCQLNFNLKSTGFLDANTVAKMRTPRCGVADIVNGTTRMRSGKKKQQQNNHFHTVSQWP-----ASKFSLTYAF 77 (211)
Q Consensus 3 ~~~Ai~~fQ~~~~L~~TG~lD~~T~~~M~~pRCG~pD~~~~~~~~~~~~~~~~~~~~~~~~~kW~-----~~k~~LTy~i 77 (211)
.++|||+||+|++|++|| +|+++|++|||||||+... ++....||+ .++++|||+|
T Consensus 20 ~~~al~~~Q~f~~l~~tG----~tl~~m~kPrCgv~d~~~~---------------l~~~~~kW~~~~~~~~~~~LTY~f 80 (479)
T 1k7i_A 20 TSSAYNSVYDFLRYHDRG----DGLTVNGKTSYSIDQAAAQ---------------ITRENVSWNGTNVFGKSANLTFKF 80 (479)
T ss_dssp CCHHHHHHHHHTTTTCCS----TTCEETTEECCCHHHHHHH---------------HTTTCEETTEESCCSCCEEEEEEE
T ss_pred hHHHHHHHHHHhCCCCcC----cchhhhcCCCCCCcchhhh---------------hccCCCccCCccccCCCceEEEEE
Confidence 367999999999999999 8999999999999996421 112345894 1289999999
Q ss_pred ecCCc------------c-hhHHHHHHHHHHHHccCCcceEeccCCCCcceEEEeeeccCCCCCCCCCCCCCCCcccccc
Q 039712 78 RLGTR------------G-DAITPVARAFQTWAANTQFRFSKIEDFAGADIKISFESRNHGDGRPFDGRGGPDGTLAHAF 144 (211)
Q Consensus 78 ~~~~~------------~-~~~~~i~~Af~~Ws~v~~l~F~ev~~~~~aDI~I~F~~~~hgd~~~fDG~g~~~g~lAhAf 144 (211)
.++++ . .+++++++||++|++|++|+|+||....+++|+|.|..+.|++..+ | ++|||||
T Consensus 81 ~~~~~~~~~~~~~~~~ls~~~~~~i~~Af~~Ws~vt~L~F~ev~~~~~adI~f~~~~~~~~g~~~----g---g~lAhA~ 153 (479)
T 1k7i_A 81 LQSVSSIPSGDTGFVKFNAEQIEQAKLSLQSWSDVANLTFTEVTGNKSANITFGNYTRDASGNLD----Y---GTQAYAY 153 (479)
T ss_dssp CSCCSCCTTSCBCCBCCCHHHHHHHHHHHHHHHTTBSEEEEECCTTCCCSEEEEEECBCTTSCBC----C---SCCEEEC
T ss_pred eCCCCcccccccccccCCHHHHHHHHHHHHHHhcccceeEEEeCCCCCeeEEEEEecCCCCCccc----c---cceeEee
Confidence 98753 1 5667789999999999999999999777899999998888755443 6 9999999
Q ss_pred CCCC----CcccccCCCCcccCCCCCceeeeeEE-------eeccCCCCCCCC----CcccCC----CC-----------
Q 039712 145 APTN----GRFHYDADEPWAVGAVQGAFDSLKDT-------YIIAPSTAVQNA----PCTATV----LW----------- 194 (211)
Q Consensus 145 ~P~~----G~ihfD~de~Wt~~~~~~~~~l~~Va-------LGL~HS~~~~~s----p~y~~~----~~----------- 194 (211)
+|.. |++||+.+|.|...... +..++.|| |||.|| ++++| |+|... ..
T Consensus 154 ~P~~g~~~g~~~~~~~~~~~~~~~~-g~~~~~va~HEiGHaLGL~Hs-~~~~a~~m~P~y~~~~~~~d~~~~svMsY~~~ 231 (479)
T 1k7i_A 154 YPGNYQGAGSSWYNYNQSNIRNPGS-EEYGRQTFTHEIGHALGLAHP-GEYNAGEGDPSYNDAVYAEDSYQFSIMSFWGE 231 (479)
T ss_dssp CSSSSTTTTEEEEETTSHHHHCTTT-SHHHHHHHHHHHHHHHTCCCS-SSCCSSSSCCCGGGCSSTTCSTTTCTTCSSCG
T ss_pred cCCCCccccceEecccccccccCCC-CcccccccHHHHHHhhcCCCC-CcccccccCccccccccccCCcceeEeecccc
Confidence 9964 58999999999875543 23335554 999999 99875 766520 00
Q ss_pred ------------CCCCHHHHHHHHHhhCC
Q 039712 195 ------------RSLQGDDIQGIKALYNV 211 (211)
Q Consensus 195 ------------~~L~~dDi~~Iq~LYG~ 211 (211)
..++.+||.+||+|||+
T Consensus 232 ~~~~~~~~~~y~~~~~~~Di~aIQ~LYG~ 260 (479)
T 1k7i_A 232 NETGADYNGHYGGAPMIDDIAAIQRLYGA 260 (479)
T ss_dssp GGGTCBCTTCCCCSCCHHHHHHHHHHHCB
T ss_pred cccCccccccccCCCccchhhhhhheecc
Confidence 12479999999999984
No 18
>1hy7_A Stromelysin-1, MMP-3; mixed alpha beta structure, zinc protease, inhibited, hydrol; HET: MBS; 1.50A {Homo sapiens} SCOP: d.92.1.11 PDB: 1biw_A* 1bm6_A* 1bqo_A* 1b3d_A* 1cqr_A 1d5j_A* 1d7x_A* 1d8f_A* 1d8m_A* 1g05_A* 1g49_A* 1c3i_A* 1sln_A* 1uea_A 2srt_A* 1ums_A* 1umt_A* 2d1o_A* 3oho_A* 1ciz_A* ...
Probab=100.00 E-value=6.2e-35 Score=236.82 Aligned_cols=144 Identities=36% Similarity=0.573 Sum_probs=121.8
Q ss_pred cccccCCCCCCccceeEEeecCCcc----hhHHHHHHHHHHHHccCCcceEeccCCCCcceEEEeeeccCCCCCCCCCCC
Q 039712 59 HFHTVSQWPASKFSLTYAFRLGTRG----DAITPVARAFQTWAANTQFRFSKIEDFAGADIKISFESRNHGDGRPFDGRG 134 (211)
Q Consensus 59 ~~~~~~kW~~~k~~LTy~i~~~~~~----~~~~~i~~Af~~Ws~v~~l~F~ev~~~~~aDI~I~F~~~~hgd~~~fDG~g 134 (211)
++..+.||+ |.+|||+|.++++. +++++|++||+.|+++++|+|+|+.+ ..|||+|.|..+.|||+++|||++
T Consensus 3 ~~~~~~~W~--~~~ltY~i~~~~~~~~~~~~~~~i~~A~~~W~~~t~l~F~~~~~-~~adI~I~f~~~~~g~~~~~~G~~ 79 (173)
T 1hy7_A 3 TFPGIPKWR--KTHLTYRIVNYTPDLPKDAVDSAVEKALKVWEEVTPLTFSRLYE-GEADIMISFAVREHGDFYPFDGPG 79 (173)
T ss_dssp BCTTCCCCS--SSEEEEEECCBCTTSCHHHHHHHHHHHHHHHHTTSSCEEEECSS-SCCSEEEEEECSSCSSSCCCCSSS
T ss_pred cCCCCCccC--CceEEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCCcceEEecc-cCCCeeEEEecccccccceeeCCC
Confidence 455678998 99999999986532 45677899999999999999999975 489999999999999999999999
Q ss_pred CCCCccccccCCCC---CcccccCCCCcccCCCCCceeeeeEE-------eeccCCCCCCCC---CcccC---CCCCCCC
Q 039712 135 GPDGTLAHAFAPTN---GRFHYDADEPWAVGAVQGAFDSLKDT-------YIIAPSTAVQNA---PCTAT---VLWRSLQ 198 (211)
Q Consensus 135 ~~~g~lAhAf~P~~---G~ihfD~de~Wt~~~~~~~~~l~~Va-------LGL~HS~~~~~s---p~y~~---~~~~~L~ 198 (211)
|+|||||+|.. |+||||++|.|+++. .+.+++.|+ |||.|+ .+++| |+|.+ .....|+
T Consensus 80 ---g~la~a~~p~~~~~g~~~~d~~~~w~~~~--~g~~~~~v~~HEiGHaLGL~H~-~~~~svM~p~~~~~~~~~~~~l~ 153 (173)
T 1hy7_A 80 ---NVLAHAYAPGPGINGDAHFDDDEQWTKDT--TGTNLFLVAAHEIGHSLGLFHS-ANTEALMYPLYHSLTDLTRFRLS 153 (173)
T ss_dssp ---SCCEEECCSSSTTTTCEEEETTSCEESSS--SSEEHHHHHHHHHHHHHTBCCC-SCTTSTTSCC------CTTCCCC
T ss_pred ---ceeEEEecCCCCccceEEeccccccccCC--ccchhhhhHHHHHHHhhcCCCC-CCCCccccccccccCCCCCCCCC
Confidence 99999999964 999999999999864 367887775 999999 99999 55663 1223899
Q ss_pred HHHHHHHHHhhCC
Q 039712 199 GDDIQGIKALYNV 211 (211)
Q Consensus 199 ~dDi~~Iq~LYG~ 211 (211)
.+||.+||+|||+
T Consensus 154 ~~Di~~iq~lYg~ 166 (173)
T 1hy7_A 154 QDDINGIQSLYGP 166 (173)
T ss_dssp HHHHHHHHHHHCS
T ss_pred HHHHHHHHHHhCc
Confidence 9999999999995
No 19
>1cge_A Fibroblast collagenase; hydrolase (metalloprotease); 1.90A {Homo sapiens} SCOP: d.92.1.11 PDB: 2j0t_A 1ayk_A 1hfc_A* 2ayk_A 2tcl_A* 3ayk_A* 4ayk_A* 1cgl_A* 1cgf_A 966c_A* 3shi_A
Probab=100.00 E-value=1.3e-34 Score=233.96 Aligned_cols=142 Identities=35% Similarity=0.565 Sum_probs=121.8
Q ss_pred cccCCCCCCccceeEEeecCCcc----hhHHHHHHHHHHHHccCCcceEeccCCCCcceEEEeeeccCCCCCCCCCCCCC
Q 039712 61 HTVSQWPASKFSLTYAFRLGTRG----DAITPVARAFQTWAANTQFRFSKIEDFAGADIKISFESRNHGDGRPFDGRGGP 136 (211)
Q Consensus 61 ~~~~kW~~~k~~LTy~i~~~~~~----~~~~~i~~Af~~Ws~v~~l~F~ev~~~~~aDI~I~F~~~~hgd~~~fDG~g~~ 136 (211)
+.+.||+ |.+|||+|.++++. +++++|++||+.|+++++|+|+|+.. ..|||+|.|..+.|||+++|||++
T Consensus 3 ~~~~~W~--~~~itY~i~~~~~~~~~~~~~~~i~~A~~~W~~~t~l~F~~~~~-~~adI~I~f~~~~~g~~~~~~G~~-- 77 (168)
T 1cge_A 3 EGNPRWE--QTHLRYRIENYTPDLPRADVDHAIEKAFQLWSNVTPLTFTKVSE-GQADIMISFVRGDHRDNSPFDGPG-- 77 (168)
T ss_dssp CCCCCCS--SSEEEEEECSCCTTSCHHHHHHHHHHHHHHHHTTSSCEEEECSS-SCCSEEEEEECSCCSSSSCCCSSS--
T ss_pred CCCCccC--CCEEEEEEeCCCCCCCHHHHHHHHHHHHHHHhhccCceeEEecC-CCCcEEEEEeeccccccccccccC--
Confidence 3467998 99999999987542 45677899999999999999999974 489999999999999999999999
Q ss_pred CCccccccCCCC---CcccccCCCCcccCCCCCceeeeeEE-------eeccCCCCCCCC---CcccCCCCCCCCHHHHH
Q 039712 137 DGTLAHAFAPTN---GRFHYDADEPWAVGAVQGAFDSLKDT-------YIIAPSTAVQNA---PCTATVLWRSLQGDDIQ 203 (211)
Q Consensus 137 ~g~lAhAf~P~~---G~ihfD~de~Wt~~~~~~~~~l~~Va-------LGL~HS~~~~~s---p~y~~~~~~~L~~dDi~ 203 (211)
|+|||||+|.. |++|||.+|.|+.+. .+.+++.|+ |||.|+ .+++| |+|.......|+.+||.
T Consensus 78 -g~la~a~~P~~~~~g~~~~d~~~~w~~~~--~g~~~~~v~~HEiGHaLGL~H~-~~~~svM~~~~~~~~~~~l~~~Di~ 153 (168)
T 1cge_A 78 -GNLAHAFQPGPGIGGDAHFDEDERWTNNF--REYNLHRVAAHELGHSLGLSHS-TDIGALMYPSYTFSGDVQLAQDDID 153 (168)
T ss_dssp -SCCEEECCSSSTTTTCEEEETTSCCBSSS--SSCBHHHHHHHHHHHHTTCCCC-SCTTSTTCSSCCCCSCCCCCHHHHH
T ss_pred -CeEEEeECCCCCccceEEEccccccccCC--CCcchhhhhhhHhHhhhcCCCC-CCCCceecccccCCCCCCCCHHHHH
Confidence 99999999964 899999999998643 367887775 999999 99999 55654333489999999
Q ss_pred HHHHhhCC
Q 039712 204 GIKALYNV 211 (211)
Q Consensus 204 ~Iq~LYG~ 211 (211)
+||+|||+
T Consensus 154 ~i~~lYg~ 161 (168)
T 1cge_A 154 GIQAIYGR 161 (168)
T ss_dssp HHHHHHCC
T ss_pred HHHHHhCc
Confidence 99999995
No 20
>2jsd_A Matrix metalloproteinase-20; MMP-NNGH, structural genomics, structural proteomics in europe, spine, spine-2, spine2-complexes, hydrolase; HET: NGH; NMR {Homo sapiens}
Probab=100.00 E-value=6.1e-34 Score=227.67 Aligned_cols=140 Identities=39% Similarity=0.626 Sum_probs=120.2
Q ss_pred cCCCCCCccceeEEeecCCcc----hhHHHHHHHHHHHHccCCcceEeccCCCCcceEEEeeeccCCCCCCCCCCCCCCC
Q 039712 63 VSQWPASKFSLTYAFRLGTRG----DAITPVARAFQTWAANTQFRFSKIEDFAGADIKISFESRNHGDGRPFDGRGGPDG 138 (211)
Q Consensus 63 ~~kW~~~k~~LTy~i~~~~~~----~~~~~i~~Af~~Ws~v~~l~F~ev~~~~~aDI~I~F~~~~hgd~~~fDG~g~~~g 138 (211)
+.||+ |++|||+|.++++. +++++|++||+.|+++++|+|+|+.+ ..|||+|.|..+.|||+++|+|++ |
T Consensus 2 ~~~W~--~~~itY~i~~~~~~~~~~~~~~~i~~A~~~W~~~t~l~F~~~~~-~~adi~i~f~~~~~g~~~~~~G~~---g 75 (160)
T 2jsd_A 2 EPKWK--KNTLTYRISKYTPSMSSVEVDKAVEMALQAWSSAVPLSFVRINS-GEADIMISFENGDHGDSYPFDGPR---G 75 (160)
T ss_dssp CSSCS--CSEEEEEECCCCSSSCHHHHHHHHHHHHHHHHHHSSCEEEECSS-SCCSEEEEEECSCSSSSSCCCSSS---S
T ss_pred CCccc--CCeEEEEEeCCCCCCCHHHHHHHHHHHHHHHHccCCeeEEEecC-CCCCEEEEEeeccCCCCccccCCC---C
Confidence 35898 99999999986532 45678899999999999999999975 489999999999999999999999 9
Q ss_pred ccccccCCCC---CcccccCCCCcccCCCCCceeeeeEE-------eeccCCCCCCCC---CcccCCCC--CCCCHHHHH
Q 039712 139 TLAHAFAPTN---GRFHYDADEPWAVGAVQGAFDSLKDT-------YIIAPSTAVQNA---PCTATVLW--RSLQGDDIQ 203 (211)
Q Consensus 139 ~lAhAf~P~~---G~ihfD~de~Wt~~~~~~~~~l~~Va-------LGL~HS~~~~~s---p~y~~~~~--~~L~~dDi~ 203 (211)
++||||+|.. |+||||.+|.|+++. .+.+++.|+ |||.|+ .+++| |+|.+... ..|+.+||.
T Consensus 76 ~~a~a~~p~~~~~g~~~~d~~~~~~~~~--~g~~~~~v~~HEiGHaLGL~H~-~~~~svM~p~~~~~~~~~~~l~~~Di~ 152 (160)
T 2jsd_A 76 TLAHAFAPGEGLGGDTHFDNAEKWTMGT--NGFNLFTVAAHEFGHALGLAHS-TDPSALMYPTYKYKNPYGFHLPKDDVK 152 (160)
T ss_dssp CSEEECCSSSSSTTCEEEETTSCEESSS--SSEEHHHHHHHHHHHHHTCCCC-CCTTCSSCTTTCCCCTTTCCCCSHHHH
T ss_pred eeEEEecCCCCcCccEEeccccccccCC--cchhhHHHHHHHhHhhhcCCCC-CCCCcEeccccccCCCCCCCCCHHHHH
Confidence 9999999954 899999999999864 367777775 999999 99999 55654322 289999999
Q ss_pred HHHHhhCC
Q 039712 204 GIKALYNV 211 (211)
Q Consensus 204 ~Iq~LYG~ 211 (211)
+||+|||+
T Consensus 153 ~iq~LYg~ 160 (160)
T 2jsd_A 153 GIQALYGP 160 (160)
T ss_dssp HHHHHHCC
T ss_pred HHHHHcCC
Confidence 99999995
No 21
>1g9k_A Serralysin; beta jelly roll, hydrolase; 1.96A {Pseudomonas} SCOP: b.80.7.1 d.92.1.6 PDB: 1o0q_A 1o0t_A 1om6_A 1om7_A 1om8_A 1omj_A 1h71_P
Probab=100.00 E-value=1.9e-34 Score=265.79 Aligned_cols=170 Identities=16% Similarity=0.214 Sum_probs=130.3
Q ss_pred ChHHHHHHHHHHhcCCCccccCCHHHHHHHhCCCCCcccCCCCcccccCccccccccccccccCCCCCC----ccceeEE
Q 039712 1 ELLESTIKTCQLNFNLKSTGFLDANTVAKMRTPRCGVADIVNGTTRMRSGKKKQQQNNHFHTVSQWPAS----KFSLTYA 76 (211)
Q Consensus 1 e~~~~Ai~~fQ~~~~L~~TG~lD~~T~~~M~~pRCG~pD~~~~~~~~~~~~~~~~~~~~~~~~~kW~~~----k~~LTy~ 76 (211)
+.+++||+.||+++|| +|.+||||+||+... ++....||... +++|||+
T Consensus 9 ~~~~~~l~~~qr~~gl------------v~~kPrcgv~d~~~~---------------l~~~~~kW~~~~~~~~~~LTY~ 61 (463)
T 1g9k_A 9 TQIDNFSHFYDRGDHL------------VNGKPSFTVDQVADQ---------------LTRSGASWHDLNNDGVINLTYT 61 (463)
T ss_dssp HHHHHHHHTTCCSSSE------------ETTEECCCHHHHHHH---------------HTTTCCCCCCTTCSSSEEEEEE
T ss_pred HHHHHHHHHhhccCCe------------ecCCCcCCCChhHHh---------------ccCCCCCCCCCcCCCCcEEEEE
Confidence 3688999999999998 478999999996421 12345689621 6899999
Q ss_pred eecCCc---------------chhHHHHHHHHHHHHccCCcceEe--ccCCCCcceEEEeeeccCCCCCCCCCCCCCCCc
Q 039712 77 FRLGTR---------------GDAITPVARAFQTWAANTQFRFSK--IEDFAGADIKISFESRNHGDGRPFDGRGGPDGT 139 (211)
Q Consensus 77 i~~~~~---------------~~~~~~i~~Af~~Ws~v~~l~F~e--v~~~~~aDI~I~F~~~~hgd~~~fDG~g~~~g~ 139 (211)
|.++++ ..++++|++||++|++|++|+|+| |.+...|||+|.| |||++ ++
T Consensus 62 f~~~~~~~~~p~~~~~~~~l~~~~~~~i~~A~~~Ws~vt~L~F~e~~v~~~~~AdI~i~~----------fdg~~---g~ 128 (463)
T 1g9k_A 62 FLTAPPVGYASRGLGTFSQFSALQKEQAKLSLESWADVAKVTFTEGPAARGDDGHMTFAN----------FSASN---GG 128 (463)
T ss_dssp ECSSCCTTGGGGCCCSEECCCHHHHHHHHHHHHHHHTTBSEEEEESCCCC-CCEEEEEEE----------ECCGG---GC
T ss_pred EecCCccccccccccccccCCHHHHHHHHHHHHHHhcccCceEEEcccCCCCCccEEEEe----------ecCCC---cc
Confidence 988642 255677899999999999999999 8766689999998 67888 99
Q ss_pred cccccCC---CCCcccccCCCCcccCCCC-CceeeeeEE-------eeccCCCCCCCC----CcccC----CC-------
Q 039712 140 LAHAFAP---TNGRFHYDADEPWAVGAVQ-GAFDSLKDT-------YIIAPSTAVQNA----PCTAT----VL------- 193 (211)
Q Consensus 140 lAhAf~P---~~G~ihfD~de~Wt~~~~~-~~~~l~~Va-------LGL~HS~~~~~s----p~y~~----~~------- 193 (211)
|||||+| ..|++|||.+|.|+..... .+..++.|+ |||.|| +++++ |+|.. .+
T Consensus 129 lA~A~~P~~~~~G~~~fd~~~~w~~~~~~~~g~~~~~va~HEiGHaLGL~Hs-~~~~a~~g~p~y~~~~~~~Ds~~~SVM 207 (463)
T 1g9k_A 129 AAFAYLPNSSRKGESWYLINKDYQVNKTPGEGNYGRQTLTHEIGHTLGLSHP-GDYNAGNGNPTYRDAVYAEDTRAYSVM 207 (463)
T ss_dssp SEEECCTTSTTTTEEEEECBTTBCTTTSCCTTSHHHHHHHHHHHHHHTCCCS-SCCC-----CCGGGCSSTTCSTTTCTT
T ss_pred eeeeecCCCCcCCceeeccccccccccccCcCccchhhhhhhhhhhhccCCC-CcccccccCccccccccccCCCceEee
Confidence 9999999 6799999999999864321 122244554 999999 88775 65530 00
Q ss_pred --------------------CCCCCHHHHHHHHHhhCC
Q 039712 194 --------------------WRSLQGDDIQGIKALYNV 211 (211)
Q Consensus 194 --------------------~~~L~~dDi~~Iq~LYG~ 211 (211)
...|+.+||.+||+|||+
T Consensus 208 sY~~~~~~~~~f~~~~~~~y~~~~~~~DI~aiQ~LYG~ 245 (463)
T 1g9k_A 208 SYWSEKNTGQVFTKTGEGAYASAPLLDDIAAVQKLYGA 245 (463)
T ss_dssp CSSCGGGGTCCCCCTTCCCCCSSCCHHHHHHHHHHHCB
T ss_pred eccccccCCCccccccccccccCcchhhhhhhhccccc
Confidence 013679999999999984
No 22
>3ba0_A Macrophage metalloelastase; FULL-length MMP-12, hemopexin domain, catalytic domain, domain interaction., calcium, extracellular matrix; 3.00A {Homo sapiens} PDB: 2jxy_A
Probab=100.00 E-value=4.2e-33 Score=249.93 Aligned_cols=138 Identities=38% Similarity=0.627 Sum_probs=121.1
Q ss_pred CCCCCCccceeEEeecCCcc----hhHHHHHHHHHHHHccCCcceEeccCCCCcceEEEeeeccCCCCCCCCCCCCCCCc
Q 039712 64 SQWPASKFSLTYAFRLGTRG----DAITPVARAFQTWAANTQFRFSKIEDFAGADIKISFESRNHGDGRPFDGRGGPDGT 139 (211)
Q Consensus 64 ~kW~~~k~~LTy~i~~~~~~----~~~~~i~~Af~~Ws~v~~l~F~ev~~~~~aDI~I~F~~~~hgd~~~fDG~g~~~g~ 139 (211)
.||. +++|||+|.++++. +++++|++||+.|++|++|+|+||.+ ..|||+|.|..++|||++||||+| |+
T Consensus 2 ~kW~--~~~lty~i~~~~~~~~~~~~~~~i~~A~~~W~~vt~l~F~ev~~-~~adI~I~f~~~~hgd~~~fdG~~---g~ 75 (365)
T 3ba0_A 2 PVWR--KHYITYRINNYTPDMNREDVDYAIRKAFQVWSNVTPLKFSKINT-GMADILVVFARGAHGDDHAFDGKG---GI 75 (365)
T ss_dssp CCCS--CSCEEEEECCCCTTCCSHHHHHHHHHHHHHHHTTSSCCEEECSS-SCCSEEEEEECSSCSSSSCCCSSS---SC
T ss_pred CCCc--CcEEEEEEeCCCCCCCHHHHHHHHHHHHHHHhcccCeeEEEecC-CCCCEEEEEeccCCCCcccccCCC---Ce
Confidence 5897 99999999987643 55677899999999999999999985 489999999999999999999999 99
Q ss_pred cccccCCCC---CcccccCCCCcccCCCCCceeeeeEE-------eeccCCCCCCCC---CcccCCC-CC-CCCHHHHHH
Q 039712 140 LAHAFAPTN---GRFHYDADEPWAVGAVQGAFDSLKDT-------YIIAPSTAVQNA---PCTATVL-WR-SLQGDDIQG 204 (211)
Q Consensus 140 lAhAf~P~~---G~ihfD~de~Wt~~~~~~~~~l~~Va-------LGL~HS~~~~~s---p~y~~~~-~~-~L~~dDi~~ 204 (211)
|||||+|.. |+||||++|.|+++. .+.+|+.|+ |||.|+ .+++| |+|.+.. .. .|+.|||.+
T Consensus 76 laha~~P~~~~~g~~hfd~~e~w~~~~--~g~~~~~~~~HE~gH~lGl~h~-~~~~svM~p~~~~~~~~~~~l~~~Di~~ 152 (365)
T 3ba0_A 76 LAHAFGPGSGIGGDAHFDEDEFWTTHS--GGTNLFLTAVHEIGHSLGLGHS-SDPKAVMFPTYKYVDINTFRLSADDIRG 152 (365)
T ss_dssp CEEECCSCSSSSSCEEEETTSCEESSS--SSEESSHHHHHHHHHHHTCCCC-SCTTTTTSSSCCCCCSSSCCCCHHHHHH
T ss_pred EEEeecCCCCccceEEeCCCCCcccCC--CcccceeehhhhhhhhhcCCCC-CccccceeeeeccccCccCCCCHHHHHH
Confidence 999999954 899999999999864 368888886 999999 99998 6676432 23 899999999
Q ss_pred HHHhhC
Q 039712 205 IKALYN 210 (211)
Q Consensus 205 Iq~LYG 210 (211)
||+|||
T Consensus 153 iq~lYg 158 (365)
T 3ba0_A 153 IQSLYG 158 (365)
T ss_dssp HHSSSC
T ss_pred HHHhhC
Confidence 999999
No 23
>1sat_A Serratia protease; parallel beta helix, parallel beta roll, hydrolase (serine protease); 1.75A {Serratia marcescens} SCOP: b.80.7.1 d.92.1.6 PDB: 1af0_A* 1smp_A 1srp_A
Probab=99.98 E-value=4.7e-34 Score=263.64 Aligned_cols=177 Identities=16% Similarity=0.133 Sum_probs=135.0
Q ss_pred ChHHHHHHHHHHhcCCCccccCCHHHHHHHhCCCCCcccCCCCcccccCccccccccccccccCCCC-----CCccceeE
Q 039712 1 ELLESTIKTCQLNFNLKSTGFLDANTVAKMRTPRCGVADIVNGTTRMRSGKKKQQQNNHFHTVSQWP-----ASKFSLTY 75 (211)
Q Consensus 1 e~~~~Ai~~fQ~~~~L~~TG~lD~~T~~~M~~pRCG~pD~~~~~~~~~~~~~~~~~~~~~~~~~kW~-----~~k~~LTy 75 (211)
++|++|||.||++++|++ |.+|||||||+... ++..+.||+ .++++|||
T Consensus 7 ~~v~~al~~~Qr~~~l~v-----------~~kPrcgvpd~~~~---------------l~~~~~kW~~~~~~~~~~~LTY 60 (471)
T 1sat_A 7 DAVDDLLHYHERGNGIQI-----------NGKDSFSNEQAGLF---------------ITRENQTWNGYKVFGQPVKLTF 60 (471)
T ss_dssp HHHHHHHTTTCCCTTCEE-----------TTEECCCHHHHHHH---------------HTTTCCCTTCTTCCSCCEEEEE
T ss_pred HHHHHHHHHHhccCCccc-----------cCCcCCCCcchhHh---------------hccCCCcccCccccCCCceEEE
Confidence 468999999999999987 56899999996421 122356894 12899999
Q ss_pred EeecCCc---------------chhHHHHHHHHHHHHccCCcceEeccCCCCcceEEEeeeccCCCCCCCCCCCCCCCcc
Q 039712 76 AFRLGTR---------------GDAITPVARAFQTWAANTQFRFSKIEDFAGADIKISFESRNHGDGRPFDGRGGPDGTL 140 (211)
Q Consensus 76 ~i~~~~~---------------~~~~~~i~~Af~~Ws~v~~l~F~ev~~~~~aDI~I~F~~~~hgd~~~fDG~g~~~g~l 140 (211)
+|.++++ .+++++|++||++|++|++|+|+||....+++|+|.|..+.|++. |+ | ++|
T Consensus 61 ~f~~~~~~~~~~~~~~~~~~ls~~~~~~i~~Af~~Ws~vt~L~F~ev~~~~~adI~f~~~~~~~~g~--~~--g---g~l 133 (471)
T 1sat_A 61 SFPDYKFSSTNVAGDTGLSKFSAEQQQQAKLSLQSWADVANITFTEVAAGQKANITFGNYSQDRPGH--YD--Y---GTQ 133 (471)
T ss_dssp ECCCCCTTCCCTTSCBSCBCCCHHHHHHHHHHHHHHHHHBSEEEEECCTTSCCSEEEEEECEEETTE--EC--C---SCC
T ss_pred EeecCCCcccccccccccccCCHHHHHHHHHHHHHhhccCCeeEEEcCCCCceEEEEEEecCCCCCc--cc--c---cce
Confidence 9988652 245677899999999999999999997678899998887776543 32 6 999
Q ss_pred ccccCCCCCccc-ccCCCCcccCCC------CCceeeeeEE-------eeccCCCCCCCC----CcccC----CCC----
Q 039712 141 AHAFAPTNGRFH-YDADEPWAVGAV------QGAFDSLKDT-------YIIAPSTAVQNA----PCTAT----VLW---- 194 (211)
Q Consensus 141 AhAf~P~~G~ih-fD~de~Wt~~~~------~~~~~l~~Va-------LGL~HS~~~~~s----p~y~~----~~~---- 194 (211)
||||+|..|..| |+++|.|..... ..+..++.|| |||.|| +++++ |+|.. ...
T Consensus 134 ahA~~P~~g~~~~~~~~e~w~~~~~~~~~~~~~g~~~~~va~HEiGHaLGL~Hs-~~~~a~~m~P~y~~~~~~~d~~~~s 212 (471)
T 1sat_A 134 AYAFLPNTIWQGQDLGGQTWYNVNQSNVKHPATEDYGRQTFTHEIGHALGLSHP-GDYNAGEGDPTYADVTYAEDTRQFS 212 (471)
T ss_dssp EEECCTTCEETTEECTTEEEEETTSHHHHCTTTCHHHHHHHHHHHHHHHTCCCS-SCCCSSSSCCCGGGCSBTTCSTTTC
T ss_pred eeEecCCCCcccccccceeeeccccccccCCCcCcccceeeeeeccccccCCCC-CCccccccCccccccccccCCccce
Confidence 999999988877 899999976421 1123334554 999999 99876 66642 000
Q ss_pred -------------------CCCCHHHHHHHHHhhCC
Q 039712 195 -------------------RSLQGDDIQGIKALYNV 211 (211)
Q Consensus 195 -------------------~~L~~dDi~~Iq~LYG~ 211 (211)
..++.+||.+||+|||.
T Consensus 213 vMsY~~~~~~g~~~~~~~~~~~~~~Di~aiQ~LYG~ 248 (471)
T 1sat_A 213 LMSYWSETNTGGDNGGHYAAAPLLDDIAAIQHLYGA 248 (471)
T ss_dssp TTCCSCGGGGTCBCTTCCCCSCCHHHHHHHHHHHCB
T ss_pred eeccccccccCccccccccCCCCcchhhhhhccccc
Confidence 13489999999999984
No 24
>1c7k_A NCNP, zinc endoprotease; alpha and beta protein, metalloproteinase, hydrolase; 1.00A {Streptomyces caespitosus} SCOP: d.92.1.1 PDB: 1kuh_A
Probab=99.76 E-value=6.1e-19 Score=136.82 Aligned_cols=116 Identities=16% Similarity=0.176 Sum_probs=86.6
Q ss_pred cceeEEeecCCcchhHHHHHHHHHHH-HccCCcceEeccCCCCcceEEEeeeccCCCCCCCCCCCCCCCccccccCCCCC
Q 039712 71 FSLTYAFRLGTRGDAITPVARAFQTW-AANTQFRFSKIEDFAGADIKISFESRNHGDGRPFDGRGGPDGTLAHAFAPTNG 149 (211)
Q Consensus 71 ~~LTy~i~~~~~~~~~~~i~~Af~~W-s~v~~l~F~ev~~~~~aDI~I~F~~~~hgd~~~fDG~g~~~g~lAhAf~P~~G 149 (211)
.+|+|...... +++.+|++||+.| ++|+||+|+|+ ..|||+|. .+. | +| +++||++.|..|
T Consensus 2 ~~~~y~~s~~~--~v~~ai~~Afq~W~s~Vt~l~F~ev---~~ADI~I~--~~~-------D-~g---g~~A~~~~~g~G 63 (132)
T 1c7k_A 2 VTVTYDPSNAP--SFQQEIANAAQIWNSSVRNVQLRAG---GNADFSYY--EGN-------D-SR---GSYAQTDGHGRG 63 (132)
T ss_dssp EEEEEEEEECG--GGHHHHHHHHHHHHHHCSSEEEEEC---SSCSEEEE--EEC-------C-TT---CCEEEECSSSCE
T ss_pred eEEEEeCCChH--HHHHHHHHHHHHHHhcCCceEEEEc---CCceEEEE--eCC-------C-CC---CceecCCCCCCC
Confidence 35777664433 6778889999999 59999999999 47999995 221 3 57 899999888889
Q ss_pred cccccCCCCcccCCCCCceeeeeEE-------eeccCCCCCCCC--CcccC--CCC-C-CCCHHHHHHHHHhhCC
Q 039712 150 RFHYDADEPWAVGAVQGAFDSLKDT-------YIIAPSTAVQNA--PCTAT--VLW-R-SLQGDDIQGIKALYNV 211 (211)
Q Consensus 150 ~ihfD~de~Wt~~~~~~~~~l~~Va-------LGL~HS~~~~~s--p~y~~--~~~-~-~L~~dDi~~Iq~LYG~ 211 (211)
++||| |+.. .+++++.|+ |||.|.+..+.+ |.+.+ ..+ . .+..+||.+||+|||.
T Consensus 64 ~~~~d----~t~~---~~~~~~~v~aHE~GH~LGL~~~y~~~~~~lMs~~~~g~~~~~~~p~~~d~a~Vq~ly~~ 131 (132)
T 1c7k_A 64 YIFLD----YQQN---QQYDSTRVTAHETGHVLGLPDHYQGPCSELMSGGGPGPSCTNPYPNAQERSRVNALWAN 131 (132)
T ss_dssp EEEEE----HHHH---HHSCHHHHHHHHHHHHHTCCCCTTSCTTCGGGTTTTCTTCCCCSCCHHHHHHHHHHTTT
T ss_pred CeEec----cccc---CCcCCceEEeeeehhccCCcccCCCCcccccCCCCCCCCCCCCCCCHHHHHHHHHHhcC
Confidence 99998 6552 357787775 999999433433 44332 112 2 7899999999999983
No 25
>3edh_A Bone morphogenetic protein 1; vicinal disulfide, alternative splicing, calcium, chondrogenesis, cleavage on PAIR of basic residues, cytokine; 1.25A {Homo sapiens} SCOP: d.92.1.0 PDB: 3edg_A 3edi_A
Probab=98.30 E-value=1.3e-06 Score=71.87 Aligned_cols=65 Identities=23% Similarity=0.378 Sum_probs=51.9
Q ss_pred cCCCCCCccceeEEeecCCcchhHHHHHHHHHHHHccCCcceEeccCCCCcceEEEeeeccCCCCCCCCCC
Q 039712 63 VSQWPASKFSLTYAFRLGTRGDAITPVARAFQTWAANTQFRFSKIEDFAGADIKISFESRNHGDGRPFDGR 133 (211)
Q Consensus 63 ~~kW~~~k~~LTy~i~~~~~~~~~~~i~~Af~~Ws~v~~l~F~ev~~~~~aDI~I~F~~~~hgd~~~fDG~ 133 (211)
..+|+ +..|+|.|.+..+.+.+..|++||+.|+++|.|+|++... .+..|.|..++||| +.+.|.
T Consensus 7 ~~~Wp--~~~VpY~I~~~~s~~~~~~I~~A~~~w~~~TCIrFv~~t~---e~dyI~f~~~~~GC-~S~vG~ 71 (201)
T 3edh_A 7 ERVWP--DGVIPFVIGGNFTGSQRAVFRQAMRHWEKHTCVTFLERTD---EDSYIVFTYRPCGC-CSYVGR 71 (201)
T ss_dssp GGSCG--GGEEEEEECSSCCHHHHHHHHHHHHHHHHHSSCEEEECSS---CSSEEEEEECCSCS-CCCSSC
T ss_pred CCcCC--CcEEEEEECCCCCHHHHHHHHHHHHHHHhhccceEEEcCC---CCcEEEEEcCCCCC-ccccCC
Confidence 45898 8899999985433456778899999999999999999872 34588999988887 446665
No 26
>3lq0_A Proastacin; metallopeptidase, zymogen activation, proenzyme, protease, D bond, hydrolase, metal-binding, metalloprotease, zymogen; 1.45A {Astacus astacus} PDB: 1iab_A 1iaa_A 1ast_A 1iac_A 1iad_A 1iae_A 1qji_A* 1qjj_A
Probab=98.01 E-value=6.8e-06 Score=69.22 Aligned_cols=59 Identities=17% Similarity=0.243 Sum_probs=48.8
Q ss_pred ccCCCCCCccceeEEeecCCcchhHHHHHHHHHHHHccCCcceEeccCCCCcceEEEeeeccCCC
Q 039712 62 TVSQWPASKFSLTYAFRLGTRGDAITPVARAFQTWAANTQFRFSKIEDFAGADIKISFESRNHGD 126 (211)
Q Consensus 62 ~~~kW~~~k~~LTy~i~~~~~~~~~~~i~~Af~~Ws~v~~l~F~ev~~~~~aDI~I~F~~~~hgd 126 (211)
...+|+ +..|+|.|.+++ .+.+..|++||+.|+++|.|+|++... .+| .|.|..+.+||
T Consensus 40 ~~~~Wp--~~~VpY~I~~~t-~~~~~~I~~Am~~w~~~TCIrFvprt~--e~d-yI~f~~~~~GC 98 (235)
T 3lq0_A 40 DEYLWS--GGVIPYTFAGVS-GADQSAILSGMQELEEKTCIRFVPRTT--ESD-YVEIFTSGSGC 98 (235)
T ss_dssp GGGSCG--GGEEEEEEESCC-HHHHHHHHHHHHHHHHHSSCEEEECSS--CSS-EEEEESSSSSE
T ss_pred CCCcCC--CCEEEEEEcCCC-HHHHHHHHHHHHHHHhcccceEEEcCC--CCc-eEEEEeCCCCC
Confidence 457898 889999999843 366778899999999999999999763 455 78888888886
No 27
>3lqb_A Hatching enzyme, LOC792177 protein; hydrolase, metalloprotease, astacin, metal- protease; 1.10A {Danio rerio}
Probab=97.09 E-value=0.00078 Score=55.18 Aligned_cols=58 Identities=21% Similarity=0.231 Sum_probs=42.4
Q ss_pred cCCCCCCcc-----ceeEEeecCCcchhHHHHHHHHHHHHccCCcceEeccCCCCcceEEEeeeccCCC
Q 039712 63 VSQWPASKF-----SLTYAFRLGTRGDAITPVARAFQTWAANTQFRFSKIEDFAGADIKISFESRNHGD 126 (211)
Q Consensus 63 ~~kW~~~k~-----~LTy~i~~~~~~~~~~~i~~Af~~Ws~v~~l~F~ev~~~~~aDI~I~F~~~~hgd 126 (211)
..+|+ |. .|.|.|.+..+.+.+..|++||+.|+.+|.|+|++.... .. .|.|..+ .||
T Consensus 9 ~~~W~--k~~~G~v~VPY~i~~~~~~~~~~~I~~A~~~w~~~TCIrFv~r~~~-~~--yi~i~~~-~GC 71 (199)
T 3lqb_A 9 SCFWK--KNANNIVEVPYVVSGEFSINDKSVIANAISIFHAQTCIRFVPRSIQ-AD--YLSIENK-DGC 71 (199)
T ss_dssp TTSCC--BCTTSCEEEEEEECTTSCHHHHHHHHHHHHHHHHHSSEEEEECSSC-SS--EEEEECC-SSE
T ss_pred CCCCC--CCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHhccCceEEEcCCC-Cc--EEEEEcC-CCc
Confidence 46897 43 799999864444667788999999999999999998732 23 4556543 354
No 28
>3p24_A BFT-3; metzincins, metalloendopeptidase, hydrolase; HET: PG4; 1.80A {Bacteroides fragilis}
Probab=96.93 E-value=0.00046 Score=61.57 Aligned_cols=35 Identities=6% Similarity=-0.134 Sum_probs=29.5
Q ss_pred eeccCCCCCCCC---CcccCCCCCCCCHHHHHHHHHhhCC
Q 039712 175 YIIAPSTAVQNA---PCTATVLWRSLQGDDIQGIKALYNV 211 (211)
Q Consensus 175 LGL~HS~~~~~s---p~y~~~~~~~L~~dDi~~Iq~LYG~ 211 (211)
|||.|+ .++.+ |+|.+ ....|++|||.|||+|||.
T Consensus 354 LGL~HD-~~~~cIM~p~~~~-~~~~L~~DDI~gIq~LYG~ 391 (397)
T 3p24_A 354 LGANHA-DDPKDLMYSKYTG-YLFHLSEKNMDIIAKNLGW 391 (397)
T ss_dssp TTCCCB-SCTTSTTBSSCCC-CCSCCCHHHHHHHHHHTTC
T ss_pred cCCCCC-CCCCcccCccccC-CCCCCCHHHHHHHHHhcCC
Confidence 999999 88877 77764 3348999999999999995
No 29
>1lbu_A Muramoyl-pentapeptide carboxypeptidase; hydrolase, nuclear receptor; 1.80A {Streptomyces albus} SCOP: a.20.1.1 d.65.1.1
Probab=96.67 E-value=0.0013 Score=53.79 Aligned_cols=32 Identities=16% Similarity=0.261 Sum_probs=29.4
Q ss_pred hHHHHHHHHHHhcCCCccccCCHHHHHHHhCC
Q 039712 2 LLESTIKTCQLNFNLKSTGFLDANTVAKMRTP 33 (211)
Q Consensus 2 ~~~~Ai~~fQ~~~~L~~TG~lD~~T~~~M~~p 33 (211)
.+++||++||+..||+++|+++.+|+++|...
T Consensus 45 ~t~~AV~~FQ~~~gL~~dG~vg~~T~~~L~~~ 76 (213)
T 1lbu_A 45 ATKAAVQRFQSAYGLAADGIAGPATFNKIYQL 76 (213)
T ss_dssp HHHHHHHHHHHHTTSCCSSCBCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCCCCCcCHHHHHHHHHH
Confidence 57899999999999999999999999999753
No 30
>3bkh_A Phikz144, lytic transglycosylase; bacteriophage, endolysin, peptidoglycan, cell WALL degradation, lysozyme, hydrolase; 2.50A {Pseudomonas phage phikz} PDB: 3bkv_A*
Probab=96.03 E-value=0.0048 Score=52.52 Aligned_cols=31 Identities=23% Similarity=0.169 Sum_probs=28.5
Q ss_pred hHHHHHHHHHHhcCCCccccCCHHHHHHHhC
Q 039712 2 LLESTIKTCQLNFNLKSTGFLDANTVAKMRT 32 (211)
Q Consensus 2 ~~~~Ai~~fQ~~~~L~~TG~lD~~T~~~M~~ 32 (211)
..++||+.||+..||+++|++|.+|...|..
T Consensus 45 ~T~~AV~~FQ~~~gL~~dGivg~~T~~~L~~ 75 (268)
T 3bkh_A 45 NTFNQVVKFQKDNCLDSDGIVGKNTWAELFS 75 (268)
T ss_dssp HHHHHHHHHHHHTTSCCSSCBCHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCCCcCCHHHHHHHHH
Confidence 4689999999999999999999999998864
No 31
>4fet_B Spore cortex-lytic enzyme prepeptide; transglycosylase, cortex hydrolase domain, sodium ION, seMet hydrolase; 1.91A {Bacillus anthracis}
Probab=95.69 E-value=0.0018 Score=53.89 Aligned_cols=31 Identities=19% Similarity=0.167 Sum_probs=0.0
Q ss_pred hHHHHHHHHHHhcCCCccccCCHHHHHHHhC
Q 039712 2 LLESTIKTCQLNFNLKSTGFLDANTVAKMRT 32 (211)
Q Consensus 2 ~~~~Ai~~fQ~~~~L~~TG~lD~~T~~~M~~ 32 (211)
..++||+.||+..||+++|++|.+|++.|.+
T Consensus 40 ~T~~AV~~FQ~~~GL~~DGivg~~T~~aL~~ 70 (222)
T 4fet_B 40 GTYWALRNFQEKFGLPVDGLAGAKTKQMLVK 70 (222)
T ss_dssp -------------------------------
T ss_pred HHHHHHHHHHHHcCCCCCCCcCHHHHHHHHh
Confidence 4679999999999999999999999998864
No 32
>2ikb_A Hypothetical protein NMB1012; structural genomics, PSI-2, MCSG, PR structure initiative; 1.70A {Neisseria meningitidis} SCOP: d.2.1.9 PDB: 2is5_A*
Probab=89.60 E-value=0.32 Score=38.46 Aligned_cols=30 Identities=10% Similarity=0.166 Sum_probs=28.0
Q ss_pred HHHHHHHHHhcCCCccccCCHHHHHHHhCC
Q 039712 4 ESTIKTCQLNFNLKSTGFLDANTVAKMRTP 33 (211)
Q Consensus 4 ~~Ai~~fQ~~~~L~~TG~lD~~T~~~M~~p 33 (211)
..|+|.||+..||.+.|++.+.|++.++..
T Consensus 91 ~~Avk~lQ~~lgl~~DGiiGp~Tl~al~~~ 120 (167)
T 2ikb_A 91 GNAARMLQRAAGVPDDGVIGAVSLKAINSL 120 (167)
T ss_dssp HHHHHHHHHHTTSCCSSCCCHHHHHHHHHS
T ss_pred HHHHHHHHHHcCCCcCCCcCHHHHHHHHhc
Confidence 579999999999999999999999999865
No 33
>2nr7_A Secretion activator protein, putative; APCC85792, porphyromonas gingivalis W83 structural genomics, PSI-2, protein structure initiative; 1.30A {Porphyromonas gingivalis} SCOP: d.2.1.9
Probab=85.27 E-value=0.61 Score=37.82 Aligned_cols=29 Identities=14% Similarity=0.213 Sum_probs=27.2
Q ss_pred HHHHHHHHHhcCCCccccCCHHHHHHHhC
Q 039712 4 ESTIKTCQLNFNLKSTGFLDANTVAKMRT 32 (211)
Q Consensus 4 ~~Ai~~fQ~~~~L~~TG~lD~~T~~~M~~ 32 (211)
..|++.||+..||.+.|++.+.|++.++.
T Consensus 103 ~~Avk~LQr~lgl~~DGiiGp~TlaAl~~ 131 (195)
T 2nr7_A 103 KYGIVIPQRILGVQADGIVGNKTLQAVNS 131 (195)
T ss_dssp THHHHHHHHHHTSCCCSCCCHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCcCCCcCHHHHHHHHc
Confidence 36999999999999999999999999986
No 34
>4gwm_A Meprin A subunit beta; mulidomain structure, hydrolase; HET: NAG BMA FUC MAN; 1.85A {Homo sapiens} PDB: 4gwn_A*
Probab=82.96 E-value=2.1 Score=40.24 Aligned_cols=61 Identities=18% Similarity=0.276 Sum_probs=42.6
Q ss_pred cccccCCCCCCccceeEEeecCCcchhHHHHHHHHHHHHccCCcceEeccCCCCcceEEEeeeccCCC
Q 039712 59 HFHTVSQWPASKFSLTYAFRLGTRGDAITPVARAFQTWAANTQFRFSKIEDFAGADIKISFESRNHGD 126 (211)
Q Consensus 59 ~~~~~~kW~~~k~~LTy~i~~~~~~~~~~~i~~Af~~Ws~v~~l~F~ev~~~~~aDI~I~F~~~~hgd 126 (211)
......+|+ + .|=|.|...-+...+..|++||+.|++.|-|+|++-.. +.| .|.|..+ .||
T Consensus 42 ~~~~~~rWp--~-~IPY~i~~~~~~~~~~~I~~Am~~~~~~TCIrF~pr~~--e~~-yi~i~~~-~GC 102 (592)
T 4gwm_A 42 IIGEKYRWP--H-TIPYVLEDSLEMNAKGVILNAFERYRLKTCIDFKPWAG--ETN-YISVFKG-SGC 102 (592)
T ss_dssp CCCGGGCCC--S-EEEEEECTTSCHHHHHHHHHHHHHHHHHSSCEEEECSS--CSS-EEEEECC-SSE
T ss_pred hcCccccCC--c-eEEEEECCCCCHHHHHHHHHHHHHHHhCCceeeEECCC--CCC-eEEEecC-CcE
Confidence 334456897 4 68899976554466677899999999999999998653 233 3455443 354
No 35
>1uf2_K Structural protein P7; virus components, icosahedral virus; 3.50A {Rice dwarf virus}
Probab=39.90 E-value=17 Score=32.61 Aligned_cols=35 Identities=23% Similarity=0.255 Sum_probs=30.8
Q ss_pred HHHHHHHHHHhcCCCccccCCHHHHHHHhCCCCCc
Q 039712 3 LESTIKTCQLNFNLKSTGFLDANTVAKMRTPRCGV 37 (211)
Q Consensus 3 ~~~Ai~~fQ~~~~L~~TG~lD~~T~~~M~~pRCG~ 37 (211)
+..||+-|..+.+...+|.+|++|+..++.|=--+
T Consensus 206 i~~AlkyFk~yv~~~~~gs~d~At~i~LNtpf~El 240 (506)
T 1uf2_K 206 LSQALPFFRNYVNVQSKGSLPPAVAACLNTPIKEL 240 (506)
T ss_pred HHHHHHHHHHhhhhhhccCcChhHHHHhcCcHHHH
Confidence 56899999999999999999999999998885333
No 36
>1k8v_A Neuropeptide F; moniezia expansa, NPF, unknown function; NMR {Synthetic} SCOP: j.6.1.1
Probab=23.40 E-value=72 Score=18.98 Aligned_cols=23 Identities=22% Similarity=0.320 Sum_probs=14.2
Q ss_pred ChHHHHHHHHHHhcCCCccccCCHHHHHHHhCCCCC
Q 039712 1 ELLESTIKTCQLNFNLKSTGFLDANTVAKMRTPRCG 36 (211)
Q Consensus 1 e~~~~Ai~~fQ~~~~L~~TG~lD~~T~~~M~~pRCG 36 (211)
|++..-|+++++++ +++.+||-|
T Consensus 18 ~~l~~YL~~LneYy-------------ai~GRPRFG 40 (40)
T 1k8v_A 18 AALRDYLRQINEYF-------------AIIGRPRFX 40 (40)
T ss_dssp SHHHHHHHHHHHHH-------------HHHHCSCC-
T ss_pred HHHHHHHHHHHHHH-------------HHhcCcCCC
Confidence 35566666666654 567788865
Done!