Query         039713
Match_columns 511
No_of_seqs    204 out of 1947
Neff          11.2
Searched_HMMs 46136
Date          Fri Mar 29 12:27:54 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/039713.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/039713hhsearch_cdd -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 KOG0156 Cytochrome P450 CYP2 s 100.0 7.5E-89 1.6E-93  647.3  48.2  470   19-505    12-488 (489)
  2 PLN03234 cytochrome P450 83B1; 100.0 1.1E-80 2.5E-85  614.2  48.5  481   16-504    11-498 (499)
  3 PLN02971 tryptophan N-hydroxyl 100.0 1.3E-80 2.9E-85  615.6  48.4  466   31-504    55-533 (543)
  4 PLN02687 flavonoid 3'-monooxyg 100.0 5.4E-80 1.2E-84  609.7  48.4  471   29-505    30-509 (517)
  5 KOG0158 Cytochrome P450 CYP3/C 100.0 2.6E-80 5.6E-85  578.8  40.8  452   34-505    32-499 (499)
  6 PLN02183 ferulate 5-hydroxylas 100.0 1.7E-79 3.7E-84  606.0  48.1  483   16-508    19-514 (516)
  7 PLN00110 flavonoid 3',5'-hydro 100.0 3.3E-79 7.2E-84  600.1  49.4  490    8-506     4-498 (504)
  8 PLN03112 cytochrome P450 famil 100.0 6.6E-79 1.4E-83  603.3  49.8  493   11-507    10-510 (514)
  9 PLN02966 cytochrome P450 83A1  100.0 7.2E-78 1.6E-82  593.0  47.4  464   29-502    25-497 (502)
 10 PLN02394 trans-cinnamate 4-mon 100.0 4.5E-77 9.7E-82  589.2  48.4  473   24-505    21-502 (503)
 11 PLN00168 Cytochrome P450; Prov 100.0   6E-77 1.3E-81  588.3  48.2  475   29-506    31-518 (519)
 12 PTZ00404 cytochrome P450; Prov 100.0   1E-76 2.2E-81  583.5  45.1  451   29-504    25-482 (482)
 13 PLN02290 cytokinin trans-hydro 100.0 1.9E-75 4.1E-80  578.9  43.5  452   32-506    41-516 (516)
 14 PLN02655 ent-kaurene oxidase   100.0 2.2E-75 4.7E-80  569.9  42.5  452   35-506     1-465 (466)
 15 KOG0159 Cytochrome P450 CYP11/ 100.0 3.7E-75   8E-80  530.6  37.6  453   33-506    50-519 (519)
 16 PLN03018 homomethionine N-hydr 100.0 1.5E-73 3.3E-78  560.6  50.5  469   32-506    39-525 (534)
 17 KOG0157 Cytochrome P450 CYP4/C 100.0 4.5E-75 9.8E-80  565.6  36.8  455   31-505    33-496 (497)
 18 PLN02500 cytochrome P450 90B1  100.0 4.1E-74 8.9E-79  565.1  42.2  461    9-503    13-488 (490)
 19 PLN03195 fatty acid omega-hydr 100.0 9.5E-73 2.1E-77  559.1  41.5  482    6-505     6-516 (516)
 20 PLN02774 brassinosteroid-6-oxi 100.0 1.2E-72 2.6E-77  550.2  40.2  437   22-503    21-462 (463)
 21 PF00067 p450:  Cytochrome P450 100.0 1.3E-73 2.7E-78  564.7  31.3  453   35-501     1-463 (463)
 22 PLN02169 fatty acid (omega-1)- 100.0 4.5E-72 9.8E-77  548.5  41.9  449   34-504    32-499 (500)
 23 PLN02196 abscisic acid 8'-hydr 100.0 3.1E-72 6.7E-77  546.7  39.6  426   29-503    31-461 (463)
 24 PLN02738 carotene beta-ring hy 100.0 9.7E-72 2.1E-76  553.3  43.1  447   44-507   142-597 (633)
 25 PLN03141 3-epi-6-deoxocathaste 100.0 1.3E-70 2.9E-75  534.6  41.4  438   29-506     3-451 (452)
 26 PLN02302 ent-kaurenoic acid ox 100.0 6.2E-70 1.4E-74  538.3  45.3  437   31-506    40-489 (490)
 27 KOG0684 Cytochrome P450 [Secon 100.0 9.5E-71 2.1E-75  488.8  33.8  447   33-505    31-485 (486)
 28 PLN02987 Cytochrome P450, fami 100.0 1.4E-69   3E-74  525.8  43.9  448   16-505    13-469 (472)
 29 PLN02936 epsilon-ring hydroxyl 100.0 4.8E-69   1E-73  527.5  40.0  457   34-508    13-485 (489)
 30 PLN02426 cytochrome P450, fami 100.0 1.9E-67 4.2E-72  514.8  42.2  438   41-506    49-501 (502)
 31 PLN02648 allene oxide synthase 100.0 9.3E-60   2E-64  453.1  30.4  404   32-476    16-461 (480)
 32 COG2124 CypX Cytochrome P450 [ 100.0 9.5E-55 2.1E-59  414.0  31.4  381   54-504    24-410 (411)
 33 PF12508 DUF3714:  Protein of u  67.5     1.9   4E-05   36.4   0.2   44  355-398    51-94  (200)
 34 PF05952 ComX:  Bacillus compet  58.5     4.7  0.0001   25.9   0.7   25  319-343     4-28  (57)
 35 PF12554 MOZART1:  Mitotic-spin  55.7      38 0.00082   21.0   4.2   42  297-338     6-47  (48)
 36 PRK06789 flagellar motor switc  50.9      19 0.00041   24.8   2.7   38  362-399    21-62  (74)
 37 KOG3506 40S ribosomal protein   48.3       8 0.00017   24.3   0.6   11  440-450    12-22  (56)
 38 KOG3653 Transforming growth fa  47.9      81  0.0018   30.7   7.2   47   53-99    210-257 (534)
 39 PHA03049 IMV membrane protein;  45.1      60  0.0013   21.5   4.1   33   11-43      9-41  (68)
 40 TIGR03779 Bac_Flav_CT_M Bacter  39.1      11 0.00023   35.9   0.1   45  355-399   254-298 (410)
 41 PF10717 ODV-E18:  Occlusion-de  38.4      59  0.0013   22.7   3.5   11   16-26     35-45  (85)
 42 COG0851 MinE Septum formation   36.8      65  0.0014   22.9   3.6   17  328-344    36-52  (88)
 43 PHA03162 hypothetical protein;  33.8      27 0.00058   26.8   1.5   24  443-466     2-25  (135)
 44 COG3763 Uncharacterized protei  33.2      51  0.0011   22.2   2.5   27    4-30      4-30  (71)
 45 COG1707 ACT domain-containing   32.9      49  0.0011   26.7   2.9   38   51-88    153-195 (218)
 46 COG4736 CcoQ Cbb3-type cytochr  32.5      42 0.00091   22.0   2.0   27    4-30      9-35  (60)
 47 PF13893 RRM_5:  RNA recognitio  31.7 1.3E+02  0.0029   18.8   4.6   35   58-92      1-39  (56)
 48 PF09201 SRX:  SRX;  InterPro:   31.1      45 0.00098   26.0   2.3   22  448-469    19-40  (148)
 49 PF02468 PsbN:  Photosystem II   30.4   1E+02  0.0022   18.6   3.1   20    1-20      1-20  (43)
 50 PF05961 Chordopox_A13L:  Chord  30.2 1.5E+02  0.0033   19.8   4.2   25   13-37     11-35  (68)
 51 PF05568 ASFV_J13L:  African sw  30.0      61  0.0013   25.3   2.9    6    9-14     34-39  (189)
 52 TIGR00589 ogt O-6-methylguanin  28.7      96  0.0021   21.8   3.5   59  329-388     2-66  (80)
 53 PF04202 Mfp-3:  Foot protein 3  28.2      46 0.00099   21.9   1.6   13    1-13      1-13  (71)
 54 PRK05933 type III secretion sy  28.1      63  0.0014   29.5   3.1   42  358-399   316-362 (372)
 55 PF11227 DUF3025:  Protein of u  27.1      37 0.00081   28.9   1.4   19  402-420   193-211 (212)
 56 PF09926 DUF2158:  Uncharacteri  26.5      65  0.0014   20.5   2.1   18   65-82      3-20  (53)
 57 PF08492 SRP72:  SRP72 RNA-bind  26.0      44 0.00095   21.8   1.3    8  417-424    44-51  (59)
 58 PHA02902 putative IMV membrane  25.4 2.1E+02  0.0045   18.9   4.7   21   10-30      9-29  (70)
 59 PF15330 SIT:  SHP2-interacting  24.1 1.8E+02  0.0038   21.9   4.4   11   40-50     45-55  (107)
 60 COG4471 Uncharacterized protei  23.9 2.3E+02  0.0051   20.2   4.5   35   59-93     19-53  (90)
 61 PTZ00218 40S ribosomal protein  23.9      34 0.00073   21.8   0.5   14  441-454    11-26  (54)
 62 PRK01844 hypothetical protein;  23.4      76  0.0016   21.6   2.1   22    9-30      9-30  (72)
 63 PF05084 GRA6:  Granule antigen  23.1 1.5E+02  0.0033   23.7   4.0   38   10-47    155-194 (215)
 64 PF05393 Hum_adeno_E3A:  Human   22.3 1.9E+02  0.0042   20.5   3.9    6   40-45     66-71  (94)
 65 PHA02681 ORF089 virion membran  21.4   3E+02  0.0064   19.3   6.4    6   23-28     22-27  (92)
 66 PF13625 Helicase_C_3:  Helicas  20.9 2.2E+02  0.0047   22.2   4.7   41   52-94     74-114 (129)
 67 PF14129 DUF4296:  Domain of un  20.8 3.2E+02   0.007   19.4   5.9   48  295-342    31-78  (87)
 68 PRK10597 DNA damage-inducible   20.8 2.8E+02  0.0061   19.6   4.5   38   55-92     23-68  (81)
 69 PF08776 VASP_tetra:  VASP tetr  20.7 1.2E+02  0.0025   17.9   2.2   29  328-369    10-38  (40)
 70 PF14483 Cut8_M:  Cut8 dimerisa  20.6 1.4E+02  0.0031   17.4   2.6   12  325-336    24-35  (38)
 71 PF07849 DUF1641:  Protein of u  20.4 1.1E+02  0.0023   18.3   2.2   19  318-336    13-31  (42)
 72 PRK02302 hypothetical protein;  20.3 2.3E+02   0.005   20.4   4.1   34   60-93     21-54  (89)
 73 PF06643 DUF1158:  Protein of u  20.3 1.5E+02  0.0033   20.0   2.9   25    6-30     55-79  (82)

No 1  
>KOG0156 consensus Cytochrome P450 CYP2 subfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=7.5e-89  Score=647.25  Aligned_cols=470  Identities=44%  Similarity=0.810  Sum_probs=411.4

Q ss_pred             HHHHHHHhhcCCCCCCCCCCCCCCccccccccCCC-ccHHHHHHHHhhCCeEEEecCCccEEEecCHHHHHHHHHhcccc
Q 039713           19 ILARSILRRSKRTSYFPPSPMALPIIGHLHLLAPI-PHQALHKLSIRYGPLIHFRLGSVPCVAVCSADVAKDFFKTHETS   97 (511)
Q Consensus        19 ~~~~~~~~~~~~~~~~ppgp~~~P~~G~~~~~~~~-~~~~~~~~~~kyG~v~~~~~g~~~~v~v~dp~~~~~i~~~~~~~   97 (511)
                      +++.+++.+++++.++||||+++|++||+++++.. +|..+.+|.++|||||++|+|+.++|+|+|+++++|++.+++..
T Consensus        12 ~l~~~~~~~~~~~~~lPPGP~~lPiIGnl~~l~~~~~h~~~~~ls~~yGpi~tl~lG~~~~Vviss~~~akE~l~~~d~~   91 (489)
T KOG0156|consen   12 LLLSLFFKKYRKRRNLPPGPPPLPIIGNLHQLGSLPPHRSFRKLSKKYGPVFTLRLGSVPVVVISSYEAAKEVLVKQDLE   91 (489)
T ss_pred             HHHHHHHHhccCCCCCCcCCCCCCccccHHHcCCCchhHHHHHHHHHhCCeEEEEecCceEEEECCHHHHHHHHHhCCcc
Confidence            33334444444448899999999999999999776 99999999999999999999999999999999999999999999


Q ss_pred             ccCCCc-ccchhhhccCCcceeeccCchhhhhhhhhHHHhcCchHHHhhhhhhHHHHHHHHHHHHHHHccCCCceehHHH
Q 039713           98 ILNRPF-LINVDYITYGSADFLFAPYGPYWKFMKKICMTQLLGGQTLNQFLPIRFEEIRRFIRYVLKKAKASEEVDVGGQ  176 (511)
Q Consensus        98 ~~~~~~-~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~i~~~~~~ll~~l~~~~~~~~~vdl~~~  176 (511)
                      |++||. ......+..++.+++++.+|+.|+.+||.....+++.+.+++....-.++++.+++.+.+ ...+++||+...
T Consensus        92 fa~Rp~~~~~~~~~~~~~~~i~~a~yG~~Wr~~Rr~~~~~L~~~~~~~~~~~~R~~E~~~l~~~l~~-~~~~~~vdl~~~  170 (489)
T KOG0156|consen   92 FADRPDPTATLKYLSYGGKGIVFAPYGDYWREMRRFALTELRSFGRGKSFMEIREEEVDELVKKLSK-SKKGEPVDLSEL  170 (489)
T ss_pred             ccCCCCchhhHHHhcCCCCceEeCCCcHHHHHHHHHHHHHhcChhhhhhhHHHHHHHHHHHHHHHHh-cCCCceeeHHHH
Confidence            999997 234466666777888888999999999999999999999999887778999999999887 222379999999


Q ss_pred             HHHHHHHHHHHHhhccccCCCh-HHHHHHHHHHHHHHhhhccCccccccc-hhhccc-ccchHHHHHHHHHHHHHHHHHH
Q 039713          177 LIRLTNDVVTRMTMNYRCSDNE-EEADEMRKVVSAATELTGKFNLADYIW-FCKFLD-LQGFGKRLKETLEKFDEMMERI  253 (511)
Q Consensus       177 ~~~~~~~vi~~~~fG~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~  253 (511)
                      +..++.++|++++||.++...+ +...++.+.+.+.....+.+...+++| ++.++. ..+..++......++..++++.
T Consensus       171 l~~~~~nvI~~~~fG~rf~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~p~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~  250 (489)
T KOG0156|consen  171 LDLLVGNVICRMLFGRRFEEEDEEEFLELKELVEESLELLGSFNLSDYFPFLLRWLDGISGLEKRLKKVSKRLDEFLERI  250 (489)
T ss_pred             HHHHHHHHHHHHHhCCccccCCchHHHHHHHHHHHHHHHhCCccHHHHhhHHHHhcccccHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999743 455679999999999999998889999 566664 2345667777777799999999


Q ss_pred             HHHHHHHHHhhhhcCCCCCCCcHHHHHHhhcccccccccCCHHHHHHHHHHHhhhcCCChHHHHHHHHHHHhcCchHHHH
Q 039713          254 IKEHQEARKINEEAGNDYTPNDLLDILLDISEDESSEIKLSRENIKSFIADMFAAGSDTPAITIEWALAQLINHPDVMKK  333 (511)
Q Consensus       254 i~~~~~~~~~~~~~~~~~~~~dl~~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tta~~l~~~l~~L~~~P~~~~~  333 (511)
                      ++++++.. . . .    .+.|+++.|+....++.... +++++|.+.+.++++||+|||++++.|++.+|++||++|+|
T Consensus       251 i~eh~~~~-~-~-~----~~~D~vD~lL~~~~~~~~~~-~t~~~i~~~~~dl~~AGtdTta~Tl~Wa~a~Ll~~Pev~~K  322 (489)
T KOG0156|consen  251 IDEHREKI-G-D-E----EGRDFVDALLKLMKEEKAEG-LTDDHLKALILDLFLAGTDTTATTLEWAMAELLNNPEVQKK  322 (489)
T ss_pred             HHHHHhhh-c-c-C----CCCcHHHHHHHhhcccccCC-CCHHHHHHHHHHHHhcccchHHHHHHHHHHHHHhCHHHHHH
Confidence            99998765 2 1 1    24899999999866544333 99999999999999999999999999999999999999999


Q ss_pred             HHHHHhhhhCCCCccCccccCCChhHHHHHHHhhccCC-CCccc-cccCCCeeecCeeeCCCCEEEeehhhcccCCCCCC
Q 039713          334 AREEIDSVVGKSRLVEESDIVDLPYLQAIVKEVLRLHP-TPMAV-RESTESFTINGYEIPAKTRVFINVWAICRDPKYWE  411 (511)
Q Consensus       334 l~~Ei~~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~p-~~~~~-R~~~~~~~l~g~~Ipkg~~v~~~~~~~~~d~~~~~  411 (511)
                      +++||++++|.++.++.+|+.++|||+|+|+|++|+|| +|... |.+++|+.|+||.|||||.|+++.|++||||++|+
T Consensus       323 ~qeEId~vvG~~r~v~e~D~~~lpYL~Avi~E~~Rl~p~~Pl~~ph~~~~d~~i~Gy~IPkgT~v~vn~~ai~rDp~vw~  402 (489)
T KOG0156|consen  323 LQEEIDEVVGKGRLVSESDLPKLPYLKAVIKETLRLHPPLPLLLPRETTEDTKIGGYDIPKGTTVLVNLWAIHRDPKVWE  402 (489)
T ss_pred             HHHHHHHHhCCCCCCChhhhccCHHHHHHHHHHHhcCCCccccccccccCCeeEcCEEcCCCCEEEEeehhhhcCCccCC
Confidence            99999999998888999999999999999999999999 99887 99999999999999999999999999999999999


Q ss_pred             CCCCCCCCcccCCCCCCCCCcCCCcceeeccCCCCCCCCChHHHHHHHHHHHHHHhhhcEeeecCCCCCCCccccccccc
Q 039713          412 NPFEFCPERFIGEDGKSQLDVRGQHYHYIPFGSGRRVCPGTTLALLMVQTTLAAMIQCFDWKVNGGDGTVDMEEAVGITL  491 (511)
Q Consensus       412 dp~~F~P~R~~~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~  491 (511)
                      ||++|+||||++++     +.++....++|||.|+|.|||..+|++++.+++++|+++|||++.++  .+++.+. +++.
T Consensus       403 dP~eF~PERFl~~~-----d~~~~~~~~iPFG~GRR~CpG~~La~~~l~l~la~llq~F~w~~~~~--~~d~~e~-~~~~  474 (489)
T KOG0156|consen  403 DPEEFKPERFLDSN-----DGKGLDFKLIPFGSGRRICPGEGLARAELFLFLANLLQRFDWKLPGG--KVDMEEA-GLTL  474 (489)
T ss_pred             CccccChhhhcCCc-----cccCCceEecCCCCCcCCCCcHHHHHHHHHHHHHHHHheeeeecCCC--CCCCccc-ccce
Confidence            99999999999973     12235678999999999999999999999999999999999996654  5677766 4778


Q ss_pred             ccCCceeEeeeecC
Q 039713          492 PRAHSLVCVPITML  505 (511)
Q Consensus       492 ~~~~~~~~~~~~r~  505 (511)
                      ..+.|+.+...+|.
T Consensus       475 ~~~~pl~~~~~~r~  488 (489)
T KOG0156|consen  475 KKKKPLKAVPVPRL  488 (489)
T ss_pred             ecCCcceeeeecCC
Confidence            88899999998885


No 2  
>PLN03234 cytochrome P450 83B1; Provisional
Probab=100.00  E-value=1.1e-80  Score=614.15  Aligned_cols=481  Identities=34%  Similarity=0.654  Sum_probs=387.1

Q ss_pred             HHHHHHHHHHhhcCCCCCCCCCCCCCCccccccccCC-CccHHHHHHHHhhCCeEEEecCCccEEEecCHHHHHHHHHhc
Q 039713           16 VSLILARSILRRSKRTSYFPPSPMALPIIGHLHLLAP-IPHQALHKLSIRYGPLIHFRLGSVPCVAVCSADVAKDFFKTH   94 (511)
Q Consensus        16 ~~~~~~~~~~~~~~~~~~~ppgp~~~P~~G~~~~~~~-~~~~~~~~~~~kyG~v~~~~~g~~~~v~v~dp~~~~~i~~~~   94 (511)
                      +++++.+.+.+..+++.+.||||+++|++||+..+.. +++.++.+++++||++|++++|+.++|+++||+++++++.++
T Consensus        11 ~~~~~~~~~~~~~~~~~~~pPgp~~~P~iG~~~~~~~~~~~~~~~~~~~~yG~~~~~~lg~~~~vvv~dpe~~~~il~~~   90 (499)
T PLN03234         11 VAAAAFFFLRSTTKKSLRLPPGPKGLPIIGNLHQMEKFNPQHFLFRLSKLYGPIFTMKIGGRRLAVISSAELAKELLKTQ   90 (499)
T ss_pred             HHHHHHHHHHHhcCCCCCCCcCCCCCCeeccHHhcCCCCccHHHHHHHHHcCCeEEEEecCcCEEEECCHHHHHHHHHhC
Confidence            3334445555566666788999999999999988854 788999999999999999999999999999999999999988


Q ss_pred             cccccCCCcccchhhhccCCcceeeccCchhhhhhhhhHHHhcCchHHHhhhhhhHHHHHHHHHHHHHHHccCCCceehH
Q 039713           95 ETSILNRPFLINVDYITYGSADFLFAPYGPYWKFMKKICMTQLLGGQTLNQFLPIRFEEIRRFIRYVLKKAKASEEVDVG  174 (511)
Q Consensus        95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~i~~~~~~ll~~l~~~~~~~~~vdl~  174 (511)
                      ...|..++...........+....+...++.|+.+|+.+..++|+++++..+.+.+.+.++++++.+.+....++++|+.
T Consensus        91 ~~~f~~r~~~~~~~~~~~~~~~~~~~~~~~~w~~~Rr~l~~~~f~~~~l~~~~~~i~~~~~~ll~~l~~~~~~~~~vd~~  170 (499)
T PLN03234         91 DLNFTARPLLKGQQTMSYQGRELGFGQYTAYYREMRKMCMVNLFSPNRVASFRPVREEECQRMMDKIYKAADQSGTVDLS  170 (499)
T ss_pred             CccccCCCCchhhhhhccCCCccccCCCcHHHHHHHHHHHHHhcCHHHHHHhHHHHHHHHHHHHHHHHHhccCCCeEEHH
Confidence            77888887644332222222233455678999999998656899999999999999999999999998766667889999


Q ss_pred             HHHHHHHHHHHHHHhhccccCCChHHHHHHHHHHHHHHhhhccCccccccchhhccc-ccchHHHHHHHHHHHHHHHHHH
Q 039713          175 GQLIRLTNDVVTRMTMNYRCSDNEEEADEMRKVVSAATELTGKFNLADYIWFCKFLD-LQGFGKRLKETLEKFDEMMERI  253 (511)
Q Consensus       175 ~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~  253 (511)
                      +.+..+++|+++.++||.+++..+.....+.+...+.....+.......+|++..+. ..+..++..++.+.+.+++..+
T Consensus       171 ~~~~~~t~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  250 (499)
T PLN03234        171 ELLLSFTNCVVCRQAFGKRYNEYGTEMKRFIDILYETQALLGTLFFSDLFPYFGFLDNLTGLSARLKKAFKELDTYLQEL  250 (499)
T ss_pred             HHHHHHHHHHHHHHHhCCcccccchhHHHHHHHHHHHHHHcCCCcHHHHhhHHHHhhhhhhHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999887554344556555555443333222333445443321 1233456778888888999988


Q ss_pred             HHHHHHHHHhhhhcCCCCCCCcHHHHHHhhcccccccccCCHHHHHHHHHHHhhhcCCChHHHHHHHHHHHhcCchHHHH
Q 039713          254 IKEHQEARKINEEAGNDYTPNDLLDILLDISEDESSEIKLSRENIKSFIADMFAAGSDTPAITIEWALAQLINHPDVMKK  333 (511)
Q Consensus       254 i~~~~~~~~~~~~~~~~~~~~dl~~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tta~~l~~~l~~L~~~P~~~~~  333 (511)
                      ++++++....  .    ....|+++.|++...++..+..++++++.+++..+++||+|||+++++|++++|++||++|+|
T Consensus       251 i~~~~~~~~~--~----~~~~d~l~~l~~~~~~~~~~~~~~~~~i~~~~~~ll~AG~dTTa~tl~~~l~~L~~~P~v~~k  324 (499)
T PLN03234        251 LDETLDPNRP--K----QETESFIDLLMQIYKDQPFSIKFTHENVKAMILDIVVPGTDTAAAVVVWAMTYLIKYPEAMKK  324 (499)
T ss_pred             HHHHHhhccc--C----CCcccHHHHHHHHhhccCcCCCCCHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHhCHHHHHH
Confidence            8876543211  1    125789999987643322223589999999999999999999999999999999999999999


Q ss_pred             HHHHHhhhhCCCCccCccccCCChhHHHHHHHhhccCC-CCccc-cccCCCeeecCeeeCCCCEEEeehhhcccCCCCC-
Q 039713          334 AREEIDSVVGKSRLVEESDIVDLPYLQAIVKEVLRLHP-TPMAV-RESTESFTINGYEIPAKTRVFINVWAICRDPKYW-  410 (511)
Q Consensus       334 l~~Ei~~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~p-~~~~~-R~~~~~~~l~g~~Ipkg~~v~~~~~~~~~d~~~~-  410 (511)
                      +++|+++++++++.++++++.+|||++|||+|+||++| ++... |.+.+|++++||.|||||.|+++.+++||||++| 
T Consensus       325 l~~Ei~~~~~~~~~~~~~~l~~l~yl~avi~E~lRl~p~~~~~~~R~~~~d~~~~g~~IP~Gt~v~~~~~~~~rd~~~~~  404 (499)
T PLN03234        325 AQDEVRNVIGDKGYVSEEDIPNLPYLKAVIKESLRLEPVIPILLHRETIADAKIGGYDIPAKTIIQVNAWAVSRDTAAWG  404 (499)
T ss_pred             HHHHHHHHhCCCCCCCHHHHhcChHHHHHHHHHhccCCCccccCCcccCCCeeECCEEECCCCEEEEehHhhhCCccccc
Confidence            99999999987677899999999999999999999999 88875 9999999999999999999999999999999999 


Q ss_pred             CCCCCCCCCcccCCCCCCCCCcCCCcceeeccCCCCCCCCChHHHHHHHHHHHHHHhhhcEeeecC--CCCCCCcccccc
Q 039713          411 ENPFEFCPERFIGEDGKSQLDVRGQHYHYIPFGSGRRVCPGTTLALLMVQTTLAAMIQCFDWKVNG--GDGTVDMEEAVG  488 (511)
Q Consensus       411 ~dp~~F~P~R~~~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~~~~ll~~~~~~~~~--~~~~~~~~~~~~  488 (511)
                      +||++||||||+++....  +....+..++|||+|+|.|+|+++|++|+++++++|+++|+|++.+  .+..+.+....+
T Consensus       405 ~~P~~F~PeR~l~~~~~~--~~~~~~~~~~pFG~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~  482 (499)
T PLN03234        405 DNPNEFIPERFMKEHKGV--DFKGQDFELLPFGSGRRMCPAMHLGIAMVEIPFANLLYKFDWSLPKGIKPEDIKMDVMTG  482 (499)
T ss_pred             CChhhcCchhhcCCCCCc--CcCCCcceEeCCCCCCCCCCChHHHHHHHHHHHHHHHHheeeeCCCCCCCCCCCcccccc
Confidence            899999999999753211  1123466899999999999999999999999999999999999443  223455666778


Q ss_pred             cccccCCceeEeeeec
Q 039713          489 ITLPRAHSLVCVPITM  504 (511)
Q Consensus       489 ~~~~~~~~~~~~~~~r  504 (511)
                      +..+++.++.+.+++|
T Consensus       483 ~~~~~~~~~~~~~~~~  498 (499)
T PLN03234        483 LAMHKKEHLVLAPTKH  498 (499)
T ss_pred             cccccCCCeEEEeecC
Confidence            8888888999888876


No 3  
>PLN02971 tryptophan N-hydroxylase
Probab=100.00  E-value=1.3e-80  Score=615.63  Aligned_cols=466  Identities=28%  Similarity=0.505  Sum_probs=370.0

Q ss_pred             CCCCCCCCCCCCccccccccCC-C-ccHHHHHHHHhhC-CeEEEecCCccEEEecCHHHHHHHHHhccccccCCCcccch
Q 039713           31 TSYFPPSPMALPIIGHLHLLAP-I-PHQALHKLSIRYG-PLIHFRLGSVPCVAVCSADVAKDFFKTHETSILNRPFLINV  107 (511)
Q Consensus        31 ~~~~ppgp~~~P~~G~~~~~~~-~-~~~~~~~~~~kyG-~v~~~~~g~~~~v~v~dp~~~~~i~~~~~~~~~~~~~~~~~  107 (511)
                      +.+.||||+++|++|+++.+.. . .+..+.+|.++|| +||++++|++++|+|+||+.+++++.+++..|.+++.....
T Consensus        55 ~~~lPPGP~~lPiiGnl~~l~~~~~~~~~l~~~~~~yg~~i~~~~~G~~~~vvv~dpe~ikevl~~~~~~f~~rp~~~~~  134 (543)
T PLN02971         55 LHPLPPGPTGFPIVGMIPAMLKNRPVFRWLHSLMKELNTEIACVRLGNTHVIPVTCPKIAREIFKQQDALFASRPLTYAQ  134 (543)
T ss_pred             CCCCCcCCCCCCcccchHHhccCCcHhHHHHHHHHHhCCceEEEEcCCcceEEECCHHHHHHHHHhcchhhcCCCcccch
Confidence            4468999999999999988733 2 3678899999999 89999999999999999999999999988889888764443


Q ss_pred             hhhccCCcceeeccCchhhhhhhhhHHHhcCchHHHhhhhhhHHHHHHHHHHHHHHHccCCCceehHHHHHHHHHHHHHH
Q 039713          108 DYITYGSADFLFAPYGPYWKFMKKICMTQLLGGQTLNQFLPIRFEEIRRFIRYVLKKAKASEEVDVGGQLIRLTNDVVTR  187 (511)
Q Consensus       108 ~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~i~~~~~~ll~~l~~~~~~~~~vdl~~~~~~~~~~vi~~  187 (511)
                      ..+..+..++++..+|+.|+.+|+.+..++++...++.+.+.+.++++.+++.+.+....++++|+.+.+.+++++++++
T Consensus       135 ~~l~~~~~~~l~~~~G~~Wk~~Rk~l~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~t~~vi~~  214 (543)
T PLN02971        135 KILSNGYKTCVITPFGEQFKKMRKVIMTEIVCPARHRWLHDNRAEETDHLTAWLYNMVKNSEPVDLRFVTRHYCGNAIKR  214 (543)
T ss_pred             hhccCCCCceEecCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceehHHHHHHHHHHHHHH
Confidence            33333323457888999999999999767788777778888888888888888776555567899999999999999999


Q ss_pred             HhhccccCCC-----hHHHHHHHHHHHHHHhhhc---cCccccccchhhcccccchHHHHHHHHHHHHHHHHHHHHHHHH
Q 039713          188 MTMNYRCSDN-----EEEADEMRKVVSAATELTG---KFNLADYIWFCKFLDLQGFGKRLKETLEKFDEMMERIIKEHQE  259 (511)
Q Consensus       188 ~~fG~~~~~~-----~~~~~~~~~~~~~~~~~~~---~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  259 (511)
                      ++||.++...     ++...+..+.+..++....   ...+.+++|++.+++..+..+...+..+.+.+++..+++++++
T Consensus       215 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  294 (543)
T PLN02971        215 LMFGTRTFSEKTEPDGGPTLEDIEHMDAMFEGLGFTFAFCISDYLPMLTGLDLNGHEKIMRESSAIMDKYHDPIIDERIK  294 (543)
T ss_pred             HHhCCcccccccccccchhHHHHHHHHHHHHHHHhccCCcHHHhCCchhhhcccchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999986421     1111222333333333221   1123344565544422233445555677788888888888765


Q ss_pred             HHHhhhhcCCCCCCCcHHHHHHhhcccccccccCCHHHHHHHHHHHhhhcCCChHHHHHHHHHHHhcCchHHHHHHHHHh
Q 039713          260 ARKINEEAGNDYTPNDLLDILLDISEDESSEIKLSRENIKSFIADMFAAGSDTPAITIEWALAQLINHPDVMKKAREEID  339 (511)
Q Consensus       260 ~~~~~~~~~~~~~~~dl~~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tta~~l~~~l~~L~~~P~~~~~l~~Ei~  339 (511)
                      ..+... .   ....|+++.|++...++. ...++++++.+++..+++||+|||+++++|++++|++||++|+|+++||+
T Consensus       295 ~~~~~~-~---~~~~d~l~~ll~~~~~~~-~~~ls~~~i~~~~~~l~~AG~dTTa~tl~~~l~~La~~Pevq~kl~~EI~  369 (543)
T PLN02971        295 MWREGK-R---TQIEDFLDIFISIKDEAG-QPLLTADEIKPTIKELVMAAPDNPSNAVEWAMAEMINKPEILHKAMEEID  369 (543)
T ss_pred             HHhccC-C---CCCcCHHHHHHhhhcccC-CCCCCHHHHHHhHHHHheeccchHHHHHHHHHHHHHhCHHHHHHHHHHHH
Confidence            432211 1   124699999998643221 12499999999999999999999999999999999999999999999999


Q ss_pred             hhhCCCCccCccccCCChhHHHHHHHhhccCC-CCccc-cccCCCeeecCeeeCCCCEEEeehhhcccCCCCCCCCCCCC
Q 039713          340 SVVGKSRLVEESDIVDLPYLQAIVKEVLRLHP-TPMAV-RESTESFTINGYEIPAKTRVFINVWAICRDPKYWENPFEFC  417 (511)
Q Consensus       340 ~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~p-~~~~~-R~~~~~~~l~g~~Ipkg~~v~~~~~~~~~d~~~~~dp~~F~  417 (511)
                      +++++++.++++++.+|||++|||+|+||++| +|... |.+.+|++++||.|||||.|+++.|++||||++|+||++|+
T Consensus       370 ~v~g~~~~~t~~d~~~LpYl~avi~E~lRl~p~~~~~~~r~~~~d~~~~G~~IpkGt~v~~~~~~~~~d~~~~~dP~~F~  449 (543)
T PLN02971        370 RVVGKERFVQESDIPKLNYVKAIIREAFRLHPVAAFNLPHVALSDTTVAGYHIPKGSQVLLSRYGLGRNPKVWSDPLSFK  449 (543)
T ss_pred             HHhCCCCCCCHHHhccCHHHHHHHHHHHhcCCCcccCcceecCCCeeECCEEECCCCEEEECcHHhcCChhhCCCccccC
Confidence            99997788999999999999999999999999 88755 88999999999999999999999999999999999999999


Q ss_pred             CCcccCCCCCCCCCcCCCcceeeccCCCCCCCCChHHHHHHHHHHHHHHhhhcEeeecCCCCCCCcccccccccccCCce
Q 039713          418 PERFIGEDGKSQLDVRGQHYHYIPFGSGRRVCPGTTLALLMVQTTLAAMIQCFDWKVNGGDGTVDMEEAVGITLPRAHSL  497 (511)
Q Consensus       418 P~R~~~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  497 (511)
                      ||||+++++..  .....+..++|||+|+|.|+|++||+.|+++++++||++|+|+..++...+++....+ ++..+.++
T Consensus       450 PeRfl~~~~~~--~~~~~~~~~~pFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~-~~~~~~~~  526 (543)
T PLN02971        450 PERHLNECSEV--TLTENDLRFISFSTGKRGCAAPALGTAITTMMLARLLQGFKWKLAGSETRVELMESSH-DMFLSKPL  526 (543)
T ss_pred             cccCCCCCccc--cccCCCCccCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCEEEeCCCCCCcchhhhcC-cccccccc
Confidence            99999753211  0112456799999999999999999999999999999999999654444567776666 66567799


Q ss_pred             eEeeeec
Q 039713          498 VCVPITM  504 (511)
Q Consensus       498 ~~~~~~r  504 (511)
                      .+.+++|
T Consensus       527 ~~~~~~~  533 (543)
T PLN02971        527 VMVGELR  533 (543)
T ss_pred             eeeeeec
Confidence            9999999


No 4  
>PLN02687 flavonoid 3'-monooxygenase
Probab=100.00  E-value=5.4e-80  Score=609.68  Aligned_cols=471  Identities=39%  Similarity=0.751  Sum_probs=380.0

Q ss_pred             CCCCCCCCCCCCCCccccccccCCCccHHHHHHHHhhCCeEEEecCCccEEEecCHHHHHHHHHhccccccCCCcccchh
Q 039713           29 KRTSYFPPSPMALPIIGHLHLLAPIPHQALHKLSIRYGPLIHFRLGSVPCVAVCSADVAKDFFKTHETSILNRPFLINVD  108 (511)
Q Consensus        29 ~~~~~~ppgp~~~P~~G~~~~~~~~~~~~~~~~~~kyG~v~~~~~g~~~~v~v~dp~~~~~i~~~~~~~~~~~~~~~~~~  108 (511)
                      .++.+.||||.++|++|+++.+..+++..+.+|+++||+||++++|++++|+++||+++++++.++...|.+++......
T Consensus        30 ~~~~~~pPgp~~~P~iG~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~p~~~~~il~~~~~~f~~r~~~~~~~  109 (517)
T PLN02687         30 KHKRPLPPGPRGWPVLGNLPQLGPKPHHTMAALAKTYGPLFRLRFGFVDVVVAASASVAAQFLRTHDANFSNRPPNSGAE  109 (517)
T ss_pred             CCCCCCCccCCCCCccccHHhcCCchhHHHHHHHHHhCCeeEEecCCceEEEeCCHHHHHHHHHhcchhhhcCCCccchh
Confidence            34456899999999999998887789999999999999999999999999999999999999998777888876554433


Q ss_pred             hhccCCcceeeccCchhhhhhhhhHHHhcCchHHHhhhhhhHHHHHHHHHHHHHHHccCCCceehHHHHHHHHHHHHHHH
Q 039713          109 YITYGSADFLFAPYGPYWKFMKKICMTQLLGGQTLNQFLPIRFEEIRRFIRYVLKKAKASEEVDVGGQLIRLTNDVVTRM  188 (511)
Q Consensus       109 ~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~i~~~~~~ll~~l~~~~~~~~~vdl~~~~~~~~~~vi~~~  188 (511)
                      .+...+.+.+++.+|+.|+++|+.+..++|+.++++.+.+.+.++++++++.+.+. .+++++|+...+..+++|+++.+
T Consensus       110 ~~~~~~~~~l~~~~g~~Wk~~Rr~l~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~-~~~~~vd~~~~~~~~t~dvi~~~  188 (517)
T PLN02687        110 HMAYNYQDLVFAPYGPRWRALRKICAVHLFSAKALDDFRHVREEEVALLVRELARQ-HGTAPVNLGQLVNVCTTNALGRA  188 (517)
T ss_pred             hhccCCceeEeCCCCHHHHHHHHHHHHHhCCHHHHHHhHHHHHHHHHHHHHHHHHh-cCCCceeHHHHHHHHHHHHHHHH
Confidence            33322235677888999999999986578999999999999999999999999764 34568999999999999999999


Q ss_pred             hhccccCCC--hHHHHHHHHHHHHHHhhhccCccccccchhhcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 039713          189 TMNYRCSDN--EEEADEMRKVVSAATELTGKFNLADYIWFCKFLDLQGFGKRLKETLEKFDEMMERIIKEHQEARKINEE  266 (511)
Q Consensus       189 ~fG~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  266 (511)
                      +||.++...  ++....+.+.+..+....+.......+|++.++......++..+..+.+.+++..+++++++.....  
T Consensus       189 ~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~--  266 (517)
T PLN02687        189 MVGRRVFAGDGDEKAREFKEMVVELMQLAGVFNVGDFVPALRWLDLQGVVGKMKRLHRRFDAMMNGIIEEHKAAGQTG--  266 (517)
T ss_pred             HhCccccccCCcchHHHHHHHHHHHHHHhccCcHHHHhhhHHHhCcccHHHHHHHHHHHHHHHHHHHHHHHHHhcccc--
Confidence            999987532  2234556666666665444333334556555543333345566677778888888888776543210  


Q ss_pred             cCCCCCCCcHHHHHHhhcccc---cccccCCHHHHHHHHHHHhhhcCCChHHHHHHHHHHHhcCchHHHHHHHHHhhhhC
Q 039713          267 AGNDYTPNDLLDILLDISEDE---SSEIKLSRENIKSFIADMFAAGSDTPAITIEWALAQLINHPDVMKKAREEIDSVVG  343 (511)
Q Consensus       267 ~~~~~~~~dl~~~ll~~~~~~---~~~~~l~~~~i~~~~~~~~~ag~~tta~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~  343 (511)
                         .....|+++.|++...++   .++..++++++.+++..+++||+|||+++++|++++|++||++|+|+++|++++++
T Consensus       267 ---~~~~~d~l~~ll~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~eTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~  343 (517)
T PLN02687        267 ---SEEHKDLLSTLLALKREQQADGEGGRITDTEIKALLLNLFTAGTDTTSSTVEWAIAELIRHPDILKKAQEELDAVVG  343 (517)
T ss_pred             ---CcccccHHHHHHHhhccccccccccCCCHHHHHHHHHHHhccccCchHHHHHHHHHHHHhCHHHHHHHHHHHHHHcC
Confidence               013579999999865431   12346999999999999999999999999999999999999999999999999998


Q ss_pred             CCCccCccccCCChhHHHHHHHhhccCC-CCcc-ccccCCCeeecCeeeCCCCEEEeehhhcccCCCCCCCCCCCCCCcc
Q 039713          344 KSRLVEESDIVDLPYLQAIVKEVLRLHP-TPMA-VRESTESFTINGYEIPAKTRVFINVWAICRDPKYWENPFEFCPERF  421 (511)
Q Consensus       344 ~~~~~~~~~~~~lp~l~a~i~E~lRl~p-~~~~-~R~~~~~~~l~g~~Ipkg~~v~~~~~~~~~d~~~~~dp~~F~P~R~  421 (511)
                      +++.++.+++.+||||+|||+|+||++| ++.. .|.+.+|++++||.|||||.|.++.+++||||++|+||++|+||||
T Consensus       344 ~~~~~~~~~l~~lpyl~a~i~EtlRl~p~~~~~~~R~~~~d~~~~g~~ip~Gt~v~~~~~~~h~d~~~~~dp~~F~PeRf  423 (517)
T PLN02687        344 RDRLVSESDLPQLTYLQAVIKETFRLHPSTPLSLPRMAAEECEINGYHIPKGATLLVNVWAIARDPEQWPDPLEFRPDRF  423 (517)
T ss_pred             CCCCCCHHHhhhCHHHHHHHHHHHccCCCccccccccCCCCeeECCEEECCCCEEEEecHHhcCCcccCCCcccCCchhc
Confidence            7778899999999999999999999999 8875 5999999999999999999999999999999999999999999999


Q ss_pred             cCCCCCCCCCcCCCcceeeccCCCCCCCCChHHHHHHHHHHHHHHhhhcEeeecCCCC--CCCcccccccccccCCceeE
Q 039713          422 IGEDGKSQLDVRGQHYHYIPFGSGRRVCPGTTLALLMVQTTLAAMIQCFDWKVNGGDG--TVDMEEAVGITLPRAHSLVC  499 (511)
Q Consensus       422 ~~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~~~~ll~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~  499 (511)
                      ++++.....+....+.+++|||+|+|.|+|++||++|+++++++||++|+|+..++..  ++.+....++.+.+..++.+
T Consensus       424 l~~~~~~~~~~~~~~~~~~pFG~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  503 (517)
T PLN02687        424 LPGGEHAGVDVKGSDFELIPFGAGRRICAGLSWGLRMVTLLTATLVHAFDWELADGQTPDKLNMEEAYGLTLQRAVPLMV  503 (517)
T ss_pred             CCCCCccccccCCCceeeCCCCCCCCCCCChHHHHHHHHHHHHHHHHhcceecCCCCCcccCCcccccceeeecCCCeEE
Confidence            9753211111122456899999999999999999999999999999999999543221  23333345666667778999


Q ss_pred             eeeecC
Q 039713          500 VPITML  505 (511)
Q Consensus       500 ~~~~r~  505 (511)
                      ++++|.
T Consensus       504 ~~~~R~  509 (517)
T PLN02687        504 HPRPRL  509 (517)
T ss_pred             eeccCC
Confidence            999884


No 5  
>KOG0158 consensus Cytochrome P450 CYP3/CYP5/CYP6/CYP9 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=2.6e-80  Score=578.84  Aligned_cols=452  Identities=27%  Similarity=0.413  Sum_probs=357.2

Q ss_pred             CCCCCCCCCcccccccc--CCCccHHHHHHHHhhCCeEEEecCCccEEEecCHHHHHHHHHhccccccCCC--cccchhh
Q 039713           34 FPPSPMALPIIGHLHLL--APIPHQALHKLSIRYGPLIHFRLGSVPCVAVCSADVAKDFFKTHETSILNRP--FLINVDY  109 (511)
Q Consensus        34 ~ppgp~~~P~~G~~~~~--~~~~~~~~~~~~~kyG~v~~~~~g~~~~v~v~dp~~~~~i~~~~~~~~~~~~--~~~~~~~  109 (511)
                      =.|||+++|++|++..+  .+.+.....+.+.++|+++.++.+.++.++|+||+++++|+.++.++|.++.  .......
T Consensus        32 Gi~~~~p~p~~Gn~~~~~~~~~~~~~~~~~~~~~~~~~G~y~~~~p~l~v~D~elik~I~ik~F~~F~~r~~~~~~d~~~  111 (499)
T KOG0158|consen   32 GIPGPKPLPFLGNLPGMLKRERPGDLLLDIYTKYRPVVGIYEGRQPALLVSDPELIKEILIKDFDNFYNRKRPIYGDPED  111 (499)
T ss_pred             CCCCCCCCCcEecHHHHHhccCcHHHHHHHHhcCCCEEEEEecCCcceEecCHHHHHHHHHHhCccCcCCCCCCcCCCCC
Confidence            57888889999999888  3333555555555559999999999999999999999999999999999843  3322221


Q ss_pred             hccCCcceeeccCchhhhhhhhhHHHhcCchHHHhhhhhhHHHHHHHHHHHHHHHccCCCceehHHHHHHHHHHHHHHHh
Q 039713          110 ITYGSADFLFAPYGPYWKFMKKICMTQLLGGQTLNQFLPIRFEEIRRFIRYVLKKAKASEEVDVGGQLIRLTNDVVTRMT  189 (511)
Q Consensus       110 ~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~i~~~~~~ll~~l~~~~~~~~~vdl~~~~~~~~~~vi~~~~  189 (511)
                       .. ....++..+|+.|+++|..+ +|.|+.++++.+.+.+.+.++++++.+.+....+..+++.+.+.+++.|||++++
T Consensus       112 -~l-~~~~Lf~~~g~~WK~lR~~l-sP~Fts~kmk~m~~t~~~~~~~l~~~l~~~~~~~~~~~~~dl~~~yT~DVI~~~A  188 (499)
T KOG0158|consen  112 -PL-SALNLFFLRGERWKRLRTKL-SPTFTSGKLKKMFPTMEEVGDELVRHLRRKSEGGQEGEIKDLCARYTTDVIGSCA  188 (499)
T ss_pred             -cc-cccCchhccCchHHHHHHhh-ccccchhhHHHHHHHHHHHHHHHHHHHHHhhcccCCccHHHHHHHHHHHHHhHhh
Confidence             11 12457888999999999999 5999999999999999999999999999865544678889999999999999999


Q ss_pred             hccccCCChHHHHHHHHHHHHHHhh-hccCcc----ccccchhhcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 039713          190 MNYRCSDNEEEADEMRKVVSAATEL-TGKFNL----ADYIWFCKFLDLQGFGKRLKETLEKFDEMMERIIKEHQEARKIN  264 (511)
Q Consensus       190 fG~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~----~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  264 (511)
                      ||.+.++..+...++.......... ...+.+    ...+|.+.....  .........+.+.+++...++.|    .. 
T Consensus       189 fG~~~~s~~d~~~~F~~~~~~~~~~~~~~~~l~~~~~~~~p~l~~~l~--~~~~~~~~~~~~~~~v~~~v~~R----~~-  261 (499)
T KOG0158|consen  189 FGLDANSLRDPKAEFRRMGRRAFFLSRGLFPLKFMLIFLFPKLALPLR--VKLFPEDVTDFFRKLVNSRVEQR----EK-  261 (499)
T ss_pred             cccchhhhcCchHHHHHhhHHHHHHhhccchHhHhHHHHhHHHHHhhh--cccChHHHHHHHHHHHHHHHHHH----Hh-
Confidence            9999987765666676655555444 222221    111222211100  01112223333444444444444    21 


Q ss_pred             hhcCCCCCCCcHHHHHHhhcccc---cccc-cCCHHHHHHHHHHHhhhcCCChHHHHHHHHHHHhcCchHHHHHHHHHhh
Q 039713          265 EEAGNDYTPNDLLDILLDISEDE---SSEI-KLSRENIKSFIADMFAAGSDTPAITIEWALAQLINHPDVMKKAREEIDS  340 (511)
Q Consensus       265 ~~~~~~~~~~dl~~~ll~~~~~~---~~~~-~l~~~~i~~~~~~~~~ag~~tta~~l~~~l~~L~~~P~~~~~l~~Ei~~  340 (511)
                       +.   ..+.|+++.|++...++   .... .+|.+||++.|+.|++||.||||+++++++|+|++||++|+|||+||++
T Consensus       262 -~~---~~r~Dfi~lll~~~~~~~~~~~~~~~lt~dei~aQafvFl~AGfeTts~tlsf~lYeLA~~PdvQ~kLreEI~~  337 (499)
T KOG0158|consen  262 -EN---IERNDFIDLLLDARASDFAKSKSHKALTDDEIAAQAFVFLLAGFETTASTLSFALYELAKNPDVQDKLREEIDE  337 (499)
T ss_pred             -cC---CCCchHHHHHHHhhcccccccccccccCHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHhcChHHHHHHHHHHHH
Confidence             11   14899999999886431   1111 5999999999999999999999999999999999999999999999999


Q ss_pred             hhCCCCccCccccCCChhHHHHHHHhhccCC-CCccccccCCCeeec-CeeeCCCCEEEeehhhcccCCCCCCCCCCCCC
Q 039713          341 VVGKSRLVEESDIVDLPYLQAIVKEVLRLHP-TPMAVRESTESFTIN-GYEIPAKTRVFINVWAICRDPKYWENPFEFCP  418 (511)
Q Consensus       341 ~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~p-~~~~~R~~~~~~~l~-g~~Ipkg~~v~~~~~~~~~d~~~~~dp~~F~P  418 (511)
                      ++.....++++.+.+|+||++||+||||+|| ++...|.+++|++++ ++.||||+.|.++++++||||++||||++|+|
T Consensus       338 ~~~~~~~ltyd~l~~L~YLd~Vi~ETLR~yP~~~~~~R~C~k~~~i~~~~~i~kG~~V~Ip~~alH~Dp~~~p~Pe~F~P  417 (499)
T KOG0158|consen  338 VLEEKEGLTYDSLSKLKYLDMVIKETLRLYPPAPFLNRECTKDYEIPGGFVIPKGTPVMIPTYALHHDPEYWPEPEKFKP  417 (499)
T ss_pred             HhcccCCCCHHHHhCCcHHHHHHHHHHhhCCCcccccceecCceecCCCeEeCCCCEEEeecccccCCcccCCCcccCCC
Confidence            9775545999999999999999999999999 899779999999999 99999999999999999999999999999999


Q ss_pred             CcccCCCCCCCCCcCCCcceeeccCCCCCCCCChHHHHHHHHHHHHHHhhhcEeeecCCCCCCCcc-cccccccccCCce
Q 039713          419 ERFIGEDGKSQLDVRGQHYHYIPFGSGRRVCPGTTLALLMVQTTLAAMIQCFDWKVNGGDGTVDME-EAVGITLPRAHSL  497 (511)
Q Consensus       419 ~R~~~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~~~~ll~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~  497 (511)
                      |||.+++..     ..++.+|+|||.|||.|+|++||.+|+|+.|++||++|++++...+. .... ...+.++.|.+++
T Consensus       418 ERF~~~~~~-----~~~~~~ylPFG~GPR~CIGmRfa~mq~K~~L~~lL~~f~~~~~~~t~-~~~~~~~~~~~l~pk~gi  491 (499)
T KOG0158|consen  418 ERFEEENNK-----SRHPGAYLPFGVGPRNCIGMRFALMEAKLALAHLLRNFSFEVCPTTI-IPLEGDPKGFTLSPKGGI  491 (499)
T ss_pred             ccCCCCccc-----ccCCccccCCCCCccccHHHHHHHHHHHHHHHHHHhhCEEecCCccc-CcccCCccceeeecCCce
Confidence            999986422     23677999999999999999999999999999999999999665222 2222 1236778899999


Q ss_pred             eEeeeecC
Q 039713          498 VCVPITML  505 (511)
Q Consensus       498 ~~~~~~r~  505 (511)
                      .+++++|.
T Consensus       492 ~Lkl~~r~  499 (499)
T KOG0158|consen  492 WLKLEPRD  499 (499)
T ss_pred             EEEEEeCC
Confidence            99999984


No 6  
>PLN02183 ferulate 5-hydroxylase
Probab=100.00  E-value=1.7e-79  Score=605.98  Aligned_cols=483  Identities=36%  Similarity=0.717  Sum_probs=380.2

Q ss_pred             HHHHHHHHHHhhcCCCCCCCCCCCCCCccccccccCCCccHHHHHHHHhhCCeEEEecCCccEEEecCHHHHHHHHHhcc
Q 039713           16 VSLILARSILRRSKRTSYFPPSPMALPIIGHLHLLAPIPHQALHKLSIRYGPLIHFRLGSVPCVAVCSADVAKDFFKTHE   95 (511)
Q Consensus        16 ~~~~~~~~~~~~~~~~~~~ppgp~~~P~~G~~~~~~~~~~~~~~~~~~kyG~v~~~~~g~~~~v~v~dp~~~~~i~~~~~   95 (511)
                      ++++++++++++.+++.+.||||+++|++|+++.+....+..+.+|+++||+||++++|+.++|+|+||+++++++.++.
T Consensus        19 ~~~~~~~~~~~~~~~~~~~ppgp~~~Pl~G~l~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~i~~il~~~~   98 (516)
T PLN02183         19 ISLFLFLGLISRLRRRLPYPPGPKGLPIIGNMLMMDQLTHRGLANLAKQYGGLFHMRMGYLHMVAVSSPEVARQVLQVQD   98 (516)
T ss_pred             HHHHHHHHHHhhccCCCCCCcCCCCCCeeccHHhcCCcchHHHHHHHHHhCCeeEEEeCCcceEEeCCHHHHHHHHHhhh
Confidence            44444444455556667899999999999999877666778899999999999999999999999999999999999887


Q ss_pred             ccccCCCcccchhhhccCCcceeeccCchhhhhhhhhHHHhcCchHHHhhhhhhHHHHHHHHHHHHHHHccCCCceehHH
Q 039713           96 TSILNRPFLINVDYITYGSADFLFAPYGPYWKFMKKICMTQLLGGQTLNQFLPIRFEEIRRFIRYVLKKAKASEEVDVGG  175 (511)
Q Consensus        96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~i~~~~~~ll~~l~~~~~~~~~vdl~~  175 (511)
                      ..|+.++..........+..+++++.+|+.|+++|+.+..++|+.+.++.+.+. .++++.+++.+..  ..++++|+.+
T Consensus        99 ~~f~~r~~~~~~~~~~~~~~~~l~~~~g~~w~~~Rr~~~~~~f~~~~l~~~~~~-~~~~~~~~~~l~~--~~~~~v~~~~  175 (516)
T PLN02183         99 SVFSNRPANIAISYLTYDRADMAFAHYGPFWRQMRKLCVMKLFSRKRAESWASV-RDEVDSMVRSVSS--NIGKPVNIGE  175 (516)
T ss_pred             hhhcCCCcccchhccccCCCceEeCCCChHHHHHHHHHHHHhcCHHHHHHHHHH-HHHHHHHHHHHHh--cCCCcEeHHH
Confidence            778877654333323222235688889999999999965689999999988875 4678889988865  3467899999


Q ss_pred             HHHHHHHHHHHHHhhccccCCChHHHHHHHHHHHHHHhhhccCccccccchhhcccccchHHHHHHHHHHHHHHHHHHHH
Q 039713          176 QLIRLTNDVVTRMTMNYRCSDNEEEADEMRKVVSAATELTGKFNLADYIWFCKFLDLQGFGKRLKETLEKFDEMMERIIK  255 (511)
Q Consensus       176 ~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  255 (511)
                      .+..+++|+++.++||.+.+..   ..++.+.+..+............+|++.++......++..+..+.+.+++..+++
T Consensus       176 ~~~~~~~~vi~~~~fG~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  252 (516)
T PLN02183        176 LIFTLTRNITYRAAFGSSSNEG---QDEFIKILQEFSKLFGAFNVADFIPWLGWIDPQGLNKRLVKARKSLDGFIDDIID  252 (516)
T ss_pred             HHHHHHHHHHHhHhhcCcccch---HHHHHHHHHHHHHHhCCccHHHhcchhHhcccccHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999877542   2345555555544444333445556655442223345666777888888888888


Q ss_pred             HHHHHHHhhhh-cCCCCCCCcHHHHHHhhccccc---------ccccCCHHHHHHHHHHHhhhcCCChHHHHHHHHHHHh
Q 039713          256 EHQEARKINEE-AGNDYTPNDLLDILLDISEDES---------SEIKLSRENIKSFIADMFAAGSDTPAITIEWALAQLI  325 (511)
Q Consensus       256 ~~~~~~~~~~~-~~~~~~~~dl~~~ll~~~~~~~---------~~~~l~~~~i~~~~~~~~~ag~~tta~~l~~~l~~L~  325 (511)
                      ++++.....+. ........|+++.++++..++.         .+..++++++.+++..+++||+|||+++++|++++|+
T Consensus       253 ~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTTa~tl~~~l~~La  332 (516)
T PLN02183        253 DHIQKRKNQNADNDSEEAETDMVDDLLAFYSEEAKVNESDDLQNSIKLTRDNIKAIIMDVMFGGTETVASAIEWAMAELM  332 (516)
T ss_pred             HHHHhhcccccccccccccccHHHHHHHhhhccccccccccccccCCCCHHHHHHHHHHHHHcchhhHHHHHHHHHHHHH
Confidence            77654332100 0001124689999997543211         1235899999999999999999999999999999999


Q ss_pred             cCchHHHHHHHHHhhhhCCCCccCccccCCChhHHHHHHHhhccCC-CCccccccCCCeeecCeeeCCCCEEEeehhhcc
Q 039713          326 NHPDVMKKAREEIDSVVGKSRLVEESDIVDLPYLQAIVKEVLRLHP-TPMAVRESTESFTINGYEIPAKTRVFINVWAIC  404 (511)
Q Consensus       326 ~~P~~~~~l~~Ei~~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~p-~~~~~R~~~~~~~l~g~~Ipkg~~v~~~~~~~~  404 (511)
                      +||++|+|+++|++++++.++.++.+++.++||++|||+||||++| +|...|.+.+|++++||.|||||.|.++.+++|
T Consensus       333 ~~Pevq~kl~~Ei~~v~~~~~~~~~~~l~~L~yl~avi~EtlRl~p~~p~~~r~~~~d~~l~g~~IPkGt~V~~~~~~~h  412 (516)
T PLN02183        333 KSPEDLKRVQQELADVVGLNRRVEESDLEKLTYLKCTLKETLRLHPPIPLLLHETAEDAEVAGYFIPKRSRVMINAWAIG  412 (516)
T ss_pred             hCHHHHHHHHHHHHHHcCCCCCCCHHHhccChHHHHHHHHHhccCCCccceeeeccCceeECCEEECCCCEEEEehhhhc
Confidence            9999999999999999986677899999999999999999999999 888889999999999999999999999999999


Q ss_pred             cCCCCCCCCCCCCCCcccCCCCCCCCCcCCCcceeeccCCCCCCCCChHHHHHHHHHHHHHHhhhcEeeecCCCC--CCC
Q 039713          405 RDPKYWENPFEFCPERFIGEDGKSQLDVRGQHYHYIPFGSGRRVCPGTTLALLMVQTTLAAMIQCFDWKVNGGDG--TVD  482 (511)
Q Consensus       405 ~d~~~~~dp~~F~P~R~~~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~~~~ll~~~~~~~~~~~~--~~~  482 (511)
                      |||++|+||++|+||||++++...   .....+.|+|||+|+|.|+|++||++|+++++|+|+++|+|+..++..  ...
T Consensus       413 rd~~~~~dP~~F~PeRfl~~~~~~---~~~~~~~~lpFG~G~R~CiG~~lA~~e~~l~la~ll~~f~~~~~~~~~~~~~~  489 (516)
T PLN02183        413 RDKNSWEDPDTFKPSRFLKPGVPD---FKGSHFEFIPFGSGRRSCPGMQLGLYALDLAVAHLLHCFTWELPDGMKPSELD  489 (516)
T ss_pred             CCccccCCccccCchhhCCCCCcc---ccCCcceecCCCCCCCCCCChHHHHHHHHHHHHHHHheeEEEcCCCCCCCCCC
Confidence            999999999999999999753211   112456899999999999999999999999999999999999543221  233


Q ss_pred             cccccccccccCCceeEeeeecCCCC
Q 039713          483 MEEAVGITLPRAHSLVCVPITMLDPF  508 (511)
Q Consensus       483 ~~~~~~~~~~~~~~~~~~~~~r~~~~  508 (511)
                      ....++.+.++..++.+.+++| .+-
T Consensus       490 ~~~~~~~~~~~~~~~~~~~~~r-~~~  514 (516)
T PLN02183        490 MNDVFGLTAPRATRLVAVPTYR-LQC  514 (516)
T ss_pred             hhhccccccccCCCcEEEeecC-CCC
Confidence            3334466666777899999988 443


No 7  
>PLN00110 flavonoid 3',5'-hydroxylase (F3'5'H); Provisional
Probab=100.00  E-value=3.3e-79  Score=600.13  Aligned_cols=490  Identities=36%  Similarity=0.680  Sum_probs=387.9

Q ss_pred             HHHHHHHHH-HHHHHHHHHhh-cCCCCCCCCCCCCCCccccccccCCCccHHHHHHHHhhCCeEEEecCCccEEEecCHH
Q 039713            8 IILSLIWLV-SLILARSILRR-SKRTSYFPPSPMALPIIGHLHLLAPIPHQALHKLSIRYGPLIHFRLGSVPCVAVCSAD   85 (511)
Q Consensus         8 ~~~~~~~~~-~~~~~~~~~~~-~~~~~~~ppgp~~~P~~G~~~~~~~~~~~~~~~~~~kyG~v~~~~~g~~~~v~v~dp~   85 (511)
                      ++-++++++ +.+..+++.+. ...+.+.||||+++|++|+++.++.+++.++.+++++||+||++++|++++|+|+||+
T Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pPgp~~~Pl~G~l~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dpe   83 (504)
T PLN00110          4 LLELAAATLLFFITRFFIRSLLPKPSRKLPPGPRGWPLLGALPLLGNMPHVALAKMAKRYGPVMFLKMGTNSMVVASTPE   83 (504)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcccCCCcccCCCCCeeechhhcCCchHHHHHHHHHHhCCeEEEEcCCccEEEECCHH
Confidence            333333333 33333444332 3444578999999999999988777789999999999999999999999999999999


Q ss_pred             HHHHHHHhccccccCCCcccchhhhccCCcceeeccCchhhhhhhhhHHHhcCchHHHhhhhhhHHHHHHHHHHHHHHHc
Q 039713           86 VAKDFFKTHETSILNRPFLINVDYITYGSADFLFAPYGPYWKFMKKICMTQLLGGQTLNQFLPIRFEEIRRFIRYVLKKA  165 (511)
Q Consensus        86 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~i~~~~~~ll~~l~~~~  165 (511)
                      ++++++.++...|+.++..........+..+++++.+|+.|+++|+.+..++|+.++++.+.+.+.+++..+++.+.+..
T Consensus        84 ~~~~vl~~~~~~f~~r~~~~~~~~~~~~~~~~l~~~~g~~w~~~Rr~~~~~~f~~~~l~~~~~~i~~~~~~~~~~l~~~~  163 (504)
T PLN00110         84 AARAFLKTLDINFSNRPPNAGATHLAYGAQDMVFADYGPRWKLLRKLSNLHMLGGKALEDWSQVRTVELGHMLRAMLELS  163 (504)
T ss_pred             HHHHHHHhcchhhcCCCCccchhhhccCCCceeeCCCCHHHHHHHHHHHHHhCCHHHHHHhhHHHHHHHHHHHHHHHHhc
Confidence            99999998877888887544332222333356788889999999999965689999999999999999999999987765


Q ss_pred             cCCCceehHHHHHHHHHHHHHHHhhccccC-CChHHHHHHHHHHHHHHhhhccCccccccchhhcccccchHHHHHHHHH
Q 039713          166 KASEEVDVGGQLIRLTNDVVTRMTMNYRCS-DNEEEADEMRKVVSAATELTGKFNLADYIWFCKFLDLQGFGKRLKETLE  244 (511)
Q Consensus       166 ~~~~~vdl~~~~~~~~~~vi~~~~fG~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~  244 (511)
                      .+|+++|+.+.+..+++|+++.++||.++. ..+....++.+.+...........+..++|++.++......+...+..+
T Consensus       164 ~~g~~~~~~~~~~~~~~~vi~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~  243 (504)
T PLN00110        164 QRGEPVVVPEMLTFSMANMIGQVILSRRVFETKGSESNEFKDMVVELMTTAGYFNIGDFIPSIAWMDIQGIERGMKHLHK  243 (504)
T ss_pred             cCCCcEeHHHHHHHHHHHHHHHHHhCCcccccCchhHHHHHHHHHHHHHHhccccHHHHcchHhhhCcchHHHHHHHHHH
Confidence            667889999999999999999999998862 2222345566666666554433333345565544333333455566677


Q ss_pred             HHHHHHHHHHHHHHHHHHhhhhcCCCCCCCcHHHHHHhhcccccccccCCHHHHHHHHHHHhhhcCCChHHHHHHHHHHH
Q 039713          245 KFDEMMERIIKEHQEARKINEEAGNDYTPNDLLDILLDISEDESSEIKLSRENIKSFIADMFAAGSDTPAITIEWALAQL  324 (511)
Q Consensus       245 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~dl~~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tta~~l~~~l~~L  324 (511)
                      .+.+++...++++++....  +.    ...|+++.|++...+ .++..++++++.++++.+++||+|||+++++|++++|
T Consensus       244 ~~~~~~~~~i~~~~~~~~~--~~----~~~d~l~~ll~~~~~-~~~~~l~~~~i~~~~~~~~~Ag~dTta~~l~~~l~~L  316 (504)
T PLN00110        244 KFDKLLTRMIEEHTASAHE--RK----GNPDFLDVVMANQEN-STGEKLTLTNIKALLLNLFTAGTDTSSSVIEWSLAEM  316 (504)
T ss_pred             HHHHHHHHHHHHHHhhccc--cc----cCCChhhHHhhcccc-cCCCCCCHHHHHHHHHhhhcccccchHHHHHHHHHHH
Confidence            7778888888776543211  11    246899999976422 2244699999999999999999999999999999999


Q ss_pred             hcCchHHHHHHHHHhhhhCCCCccCccccCCChhHHHHHHHhhccCC-CCcc-ccccCCCeeecCeeeCCCCEEEeehhh
Q 039713          325 INHPDVMKKAREEIDSVVGKSRLVEESDIVDLPYLQAIVKEVLRLHP-TPMA-VRESTESFTINGYEIPAKTRVFINVWA  402 (511)
Q Consensus       325 ~~~P~~~~~l~~Ei~~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~p-~~~~-~R~~~~~~~l~g~~Ipkg~~v~~~~~~  402 (511)
                      ++||++|+|+++|++++++.++.++++++++|||++|||+||||++| ++.. .|.+.+|++++||.|||||.|+++.++
T Consensus       317 ~~~P~~~~kl~~Ei~~~~~~~~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~R~~~~d~~~~g~~Ip~Gt~V~~~~~~  396 (504)
T PLN00110        317 LKNPSILKRAHEEMDQVIGRNRRLVESDLPKLPYLQAICKESFRKHPSTPLNLPRVSTQACEVNGYYIPKNTRLSVNIWA  396 (504)
T ss_pred             HhCHHHHHHHHHHHHHHhCCCCCCCHHHhhcChHHHHHHHHHhcCCCCcccccccccCCCeeeCCEEECCCCEEEEeHHH
Confidence            99999999999999999987777899999999999999999999999 8875 599999999999999999999999999


Q ss_pred             cccCCCCCCCCCCCCCCcccCCCCCCCCCcCCCcceeeccCCCCCCCCChHHHHHHHHHHHHHHhhhcEeeecCCCCCCC
Q 039713          403 ICRDPKYWENPFEFCPERFIGEDGKSQLDVRGQHYHYIPFGSGRRVCPGTTLALLMVQTTLAAMIQCFDWKVNGGDGTVD  482 (511)
Q Consensus       403 ~~~d~~~~~dp~~F~P~R~~~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~~~~ll~~~~~~~~~~~~~~~  482 (511)
                      +|+||++|+||++|+||||++++.... +.......++|||+|+|.|+|++||++|++++++.|+++|+|+..++ .+++
T Consensus       397 ~h~d~~~~~dP~~F~PeRfl~~~~~~~-~~~~~~~~~~pFG~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~-~~~~  474 (504)
T PLN00110        397 IGRDPDVWENPEEFRPERFLSEKNAKI-DPRGNDFELIPFGAGRRICAGTRMGIVLVEYILGTLVHSFDWKLPDG-VELN  474 (504)
T ss_pred             hcCChhhcCCcccCCcccccCCCCccc-ccCCCeeeEeCCCCCCCCCCcHHHHHHHHHHHHHHHHHhceeecCCC-CccC
Confidence            999999999999999999996532111 11112457999999999999999999999999999999999995432 2344


Q ss_pred             cccccccccccCCceeEeeeecCC
Q 039713          483 MEEAVGITLPRAHSLVCVPITMLD  506 (511)
Q Consensus       483 ~~~~~~~~~~~~~~~~~~~~~r~~  506 (511)
                      +....++++.++.++++.+++|..
T Consensus       475 ~~~~~~~~~~~~~~~~~~~~~r~~  498 (504)
T PLN00110        475 MDEAFGLALQKAVPLSAMVTPRLH  498 (504)
T ss_pred             cccccccccccCCCceEeeccCCC
Confidence            444567788888999999999953


No 8  
>PLN03112 cytochrome P450 family protein; Provisional
Probab=100.00  E-value=6.6e-79  Score=603.29  Aligned_cols=493  Identities=35%  Similarity=0.642  Sum_probs=389.0

Q ss_pred             HHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCccccccccCCCccHHHHHHHHhhCCeEEEecCCccEEEecCHHHHHHH
Q 039713           11 SLIWLVSLILARSILRRSKRTSYFPPSPMALPIIGHLHLLAPIPHQALHKLSIRYGPLIHFRLGSVPCVAVCSADVAKDF   90 (511)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~~~~~~ppgp~~~P~~G~~~~~~~~~~~~~~~~~~kyG~v~~~~~g~~~~v~v~dp~~~~~i   90 (511)
                      ++++++.+++.+++.++..++.+.||||+++|++||++.++.+++..+.+++++||++|++++|++++|+++||++++++
T Consensus        10 ~~~~~~~~~~~~~~~~~~~~~~~~ppgp~~~pl~G~~~~~~~~~~~~~~~~~~kyG~v~~~~~g~~~~v~v~dpe~~~~v   89 (514)
T PLN03112         10 FSVLIFNVLIWRWLNASMRKSLRLPPGPPRWPIVGNLLQLGPLPHRDLASLCKKYGPLVYLRLGSVDAITTDDPELIREI   89 (514)
T ss_pred             HHHHHHHHHHHHHccccccCCCCCccCCCCCCeeeeHHhcCCchHHHHHHHHHHhCCeEEEEecCccEEEECCHHHHHHH
Confidence            33333344444444445555668899999999999998888788999999999999999999999999999999999999


Q ss_pred             HHhccccccCCCcccchhhhccCCcceeeccCchhhhhhhhhHHHhcCchHHHhhhhhhHHHHHHHHHHHHHHHccCCCc
Q 039713           91 FKTHETSILNRPFLINVDYITYGSADFLFAPYGPYWKFMKKICMTQLLGGQTLNQFLPIRFEEIRRFIRYVLKKAKASEE  170 (511)
Q Consensus        91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~i~~~~~~ll~~l~~~~~~~~~  170 (511)
                      +.++...|+.++.........+|...+++..+|+.|+.+|+.+..++|+.++++.+.+.+.+.++.+++.+.+....+++
T Consensus        90 l~~~~~~f~~~~~~~~~~~~~~g~~~~~~~~~g~~wk~~Rr~~~~~~f~~~~l~~~~~~~~~~~~~lv~~l~~~~~~~~~  169 (514)
T PLN03112         90 LLRQDDVFASRPRTLAAVHLAYGCGDVALAPLGPHWKRMRRICMEHLLTTKRLESFAKHRAEEARHLIQDVWEAAQTGKP  169 (514)
T ss_pred             HHhCCcccccCCCcccceeeccCCCceEeCCCCHHHHHHHHHHHHHhcCHHHHHHhhHHHHHHHHHHHHHHHHhhccCCe
Confidence            98887788877654332222233334567788999999999976678999999999999999999999988775555678


Q ss_pred             eehHHHHHHHHHHHHHHHhhccccCCCh----HHHHHHHHHHHHHHhhhccCccccccchhhcccccchHHHHHHHHHHH
Q 039713          171 VDVGGQLIRLTNDVVTRMTMNYRCSDNE----EEADEMRKVVSAATELTGKFNLADYIWFCKFLDLQGFGKRLKETLEKF  246 (511)
Q Consensus       171 vdl~~~~~~~~~~vi~~~~fG~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~  246 (511)
                      +|+.+.+..+++++++.++||.++....    +....+.+.+..+............+|++.++......++.++..+.+
T Consensus       170 vd~~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~  249 (514)
T PLN03112        170 VNLREVLGAFSMNNVTRMLLGKQYFGAESAGPKEAMEFMHITHELFRLLGVIYLGDYLPAWRWLDPYGCEKKMREVEKRV  249 (514)
T ss_pred             eeHHHHHHHHHHHHHHHHHcCCccccccccchHHHHHHHHHHHHHHHHcCCCcHHHhChHHHhcCcccHHHHHHHHHHHH
Confidence            9999999999999999999999874321    233456666665554433223334456555443333445666777888


Q ss_pred             HHHHHHHHHHHHHHHHhhhhcCCCCCCCcHHHHHHhhcccccccccCCHHHHHHHHHHHhhhcCCChHHHHHHHHHHHhc
Q 039713          247 DEMMERIIKEHQEARKINEEAGNDYTPNDLLDILLDISEDESSEIKLSRENIKSFIADMFAAGSDTPAITIEWALAQLIN  326 (511)
Q Consensus       247 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~dl~~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tta~~l~~~l~~L~~  326 (511)
                      .+++...++++++..+... .  .....|+++.++++..++ ....++++++.++++.+++||+||||++++|++++|++
T Consensus       250 ~~~~~~~i~~~~~~~~~~~-~--~~~~~d~l~~ll~~~~~~-~~~~l~~~~i~~~~~~~~~AG~dTTa~~l~~~l~~L~~  325 (514)
T PLN03112        250 DEFHDKIIDEHRRARSGKL-P--GGKDMDFVDVLLSLPGEN-GKEHMDDVEIKALMQDMIAAATDTSAVTNEWAMAEVIK  325 (514)
T ss_pred             HHHHHHHHHHHHHhhcccc-c--CCccchHHHHHHHhhccc-cccCCCHHHHHHHHHHHhccccccHHHHHHHHHHHHHh
Confidence            8888888887765432210 0  012468999999864322 12358999999999999999999999999999999999


Q ss_pred             CchHHHHHHHHHhhhhCCCCccCccccCCChhHHHHHHHhhccCC-CCcc-ccccCCCeeecCeeeCCCCEEEeehhhcc
Q 039713          327 HPDVMKKAREEIDSVVGKSRLVEESDIVDLPYLQAIVKEVLRLHP-TPMA-VRESTESFTINGYEIPAKTRVFINVWAIC  404 (511)
Q Consensus       327 ~P~~~~~l~~Ei~~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~p-~~~~-~R~~~~~~~l~g~~Ipkg~~v~~~~~~~~  404 (511)
                      ||++|+++++||+++++.++.++.+++.+|||++|||+||+|++| ++.. .|.+.+|++++||.|||||.|.++.+++|
T Consensus       326 ~P~vq~kl~~Ei~~~~~~~~~~t~~~l~~L~yl~avi~EtlRl~p~~~~~~~R~~~~d~~i~g~~IPkGt~v~~~~~~~h  405 (514)
T PLN03112        326 NPRVLRKIQEELDSVVGRNRMVQESDLVHLNYLRCVVRETFRMHPAGPFLIPHESLRATTINGYYIPAKTRVFINTHGLG  405 (514)
T ss_pred             ChHHHHHHHHHHHHhcCCCCcCChhhhccCcHHHHHHHHHhccCCCcccccccccCCCeeEcCEEeCCCCEEEEehHHhh
Confidence            999999999999999987778999999999999999999999999 8876 49999999999999999999999999999


Q ss_pred             cCCCCCCCCCCCCCCcccCCCCCCCCCcCCCcceeeccCCCCCCCCChHHHHHHHHHHHHHHhhhcEeeecCCC--CCCC
Q 039713          405 RDPKYWENPFEFCPERFIGEDGKSQLDVRGQHYHYIPFGSGRRVCPGTTLALLMVQTTLAAMIQCFDWKVNGGD--GTVD  482 (511)
Q Consensus       405 ~d~~~~~dp~~F~P~R~~~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~~~~ll~~~~~~~~~~~--~~~~  482 (511)
                      |||++|+||++||||||..+.+.........+..++|||.|+|.|+|++||++|++++++.||++|+|+..++.  ..+.
T Consensus       406 ~d~~~~~dP~~F~PeRf~~~~~~~~~~~~~~~~~~~pFg~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~  485 (514)
T PLN03112        406 RNTKIWDDVEEFRPERHWPAEGSRVEISHGPDFKILPFSAGKRKCPGAPLGVTMVLMALARLFHCFDWSPPDGLRPEDID  485 (514)
T ss_pred             CCcccCCChhhcCCcccCCCCCCccccccCCCcceeCCCCCCCCCCcHHHHHHHHHHHHHHHHHheeeecCCCCCcccCC
Confidence            99999999999999998754211110011234579999999999999999999999999999999999954322  2334


Q ss_pred             cccccccccccCCceeEeeeecCCC
Q 039713          483 MEEAVGITLPRAHSLVCVPITMLDP  507 (511)
Q Consensus       483 ~~~~~~~~~~~~~~~~~~~~~r~~~  507 (511)
                      +....++.++++.++.+.+++|..+
T Consensus       486 ~~~~~~~~~~~~~~~~~~~~~r~~~  510 (514)
T PLN03112        486 TQEVYGMTMPKAKPLRAVATPRLAP  510 (514)
T ss_pred             CccccCcccccCCCeEEEeecCCcc
Confidence            4445577778888999999999754


No 9  
>PLN02966 cytochrome P450 83A1
Probab=100.00  E-value=7.2e-78  Score=592.96  Aligned_cols=464  Identities=33%  Similarity=0.667  Sum_probs=362.3

Q ss_pred             CCCCCCCCCCCCCCcccccccc-CCCccHHHHHHHHhhCCeEEEecCCccEEEecCHHHHHHHHHhccccccCCCcccch
Q 039713           29 KRTSYFPPSPMALPIIGHLHLL-APIPHQALHKLSIRYGPLIHFRLGSVPCVAVCSADVAKDFFKTHETSILNRPFLINV  107 (511)
Q Consensus        29 ~~~~~~ppgp~~~P~~G~~~~~-~~~~~~~~~~~~~kyG~v~~~~~g~~~~v~v~dp~~~~~i~~~~~~~~~~~~~~~~~  107 (511)
                      .+..+.||||+++|++||++.+ ..+++.++.+|+++||+||++++|+.++|+++||+++++++.++...|.+++.....
T Consensus        25 ~~~~~~ppgp~~~p~~G~l~~l~~~~~~~~~~~~~~~yG~v~~~~~g~~~~vvi~~p~~i~~vl~~~~~~~~~~~~~~~~  104 (502)
T PLN02966         25 TKRYKLPPGPSPLPVIGNLLQLQKLNPQRFFAGWAKKYGPILSYRIGSRTMVVISSAELAKELLKTQDVNFADRPPHRGH  104 (502)
T ss_pred             cCCCCCCcCCCCCCeeccHHhcCCCChhHHHHHHHHHhCCeEEEecCCCcEEEECCHHHHHHHHHhCcccccCCCCCccc
Confidence            3345689999999999999887 457899999999999999999999999999999999999999877677666543322


Q ss_pred             hhhccCCcceeeccCchhhhhhhhhHHHhcCchHHHhhhhhhHHHHHHHHHHHHHHHccCCCceehHHHHHHHHHHHHHH
Q 039713          108 DYITYGSADFLFAPYGPYWKFMKKICMTQLLGGQTLNQFLPIRFEEIRRFIRYVLKKAKASEEVDVGGQLIRLTNDVVTR  187 (511)
Q Consensus       108 ~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~i~~~~~~ll~~l~~~~~~~~~vdl~~~~~~~~~~vi~~  187 (511)
                      .....|.....+..+|+.|+.+|+.+.+++|+.+++..+.+.+.+.++++++.+.+....++.+|+.+.+..+++|+++.
T Consensus       105 ~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~t~dvi~~  184 (502)
T PLN02966        105 EFISYGRRDMALNHYTPYYREIRKMGMNHLFSPTRVATFKHVREEEARRMMDKINKAADKSEVVDISELMLTFTNSVVCR  184 (502)
T ss_pred             eeeccCcceeeeCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceeHHHHHHHHHHHHHHH
Confidence            22223332344566799999999995569999999999999999999999999987655677899999999999999999


Q ss_pred             HhhccccCCChHHHHHHHHHHHHHHhhhccCccccccchhhccc-ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 039713          188 MTMNYRCSDNEEEADEMRKVVSAATELTGKFNLADYIWFCKFLD-LQGFGKRLKETLEKFDEMMERIIKEHQEARKINEE  266 (511)
Q Consensus       188 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  266 (511)
                      ++||.+++..++....+.+.+..............++|++..+. .++..+......+...+++.+.++++......  +
T Consensus       185 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~  262 (502)
T PLN02966        185 QAFGKKYNEDGEEMKRFIKILYGTQSVLGKIFFSDFFPYCGFLDDLSGLTAYMKECFERQDTYIQEVVNETLDPKRV--K  262 (502)
T ss_pred             HHhCCccCccchHHHHHHHHHHHHHHHhCcccHHHhhchhhhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHhcccc--c
Confidence            99999987654444555555555544444333334455432221 12222333445556666676666655432111  1


Q ss_pred             cCCCCCCCcHHHHHHhhcccccccccCCHHHHHHHHHHHhhhcCCChHHHHHHHHHHHhcCchHHHHHHHHHhhhhCCC-
Q 039713          267 AGNDYTPNDLLDILLDISEDESSEIKLSRENIKSFIADMFAAGSDTPAITIEWALAQLINHPDVMKKAREEIDSVVGKS-  345 (511)
Q Consensus       267 ~~~~~~~~dl~~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tta~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~-  345 (511)
                      .    ...|+++.|++..+++..+..++++++.++++.+++||+|||+++++|++++|++||++|+|+++||+++++.+ 
T Consensus       263 ~----~~~~~l~~l~~~~~~~~~~~~l~~~~i~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~q~kl~~Ei~~v~~~~~  338 (502)
T PLN02966        263 P----ETESMIDLLMEIYKEQPFASEFTVDNVKAVILDIVVAGTDTAAAAVVWGMTYLMKYPQVLKKAQAEVREYMKEKG  338 (502)
T ss_pred             c----ccccHHHHHHHHHhccCcCCCCCHHHHHHHHHHHHhccccchHHHHHHHHHHHHhCHHHHHHHHHHHHHHhcccC
Confidence            1    24689999997654332234589999999999999999999999999999999999999999999999999742 


Q ss_pred             -CccCccccCCChhHHHHHHHhhccCC-CCcc-ccccCCCeeecCeeeCCCCEEEeehhhcccCCCCC-CCCCCCCCCcc
Q 039713          346 -RLVEESDIVDLPYLQAIVKEVLRLHP-TPMA-VRESTESFTINGYEIPAKTRVFINVWAICRDPKYW-ENPFEFCPERF  421 (511)
Q Consensus       346 -~~~~~~~~~~lp~l~a~i~E~lRl~p-~~~~-~R~~~~~~~l~g~~Ipkg~~v~~~~~~~~~d~~~~-~dp~~F~P~R~  421 (511)
                       +.++++++.+||||+|||+|+||++| ++.. .|.+.+|++++||.|||||.|.++.+++||||++| |||++|+||||
T Consensus       339 ~~~~~~~dl~~lpyl~avi~E~LRl~p~v~~~~~R~~~~d~~l~g~~IP~Gt~V~~~~~~~~rdp~~~g~dP~~F~PeRw  418 (502)
T PLN02966        339 STFVTEDDVKNLPYFRALVKETLRIEPVIPLLIPRACIQDTKIAGYDIPAGTTVNVNAWAVSRDEKEWGPNPDEFRPERF  418 (502)
T ss_pred             CCcCCHhhccCCcHHHHHHHHHhccCCCcccccCcccCCCeeEccEEECCCCEEEEecccccCCcccccCChhhCChhhh
Confidence             45789999999999999999999999 8876 49999999999999999999999999999999999 99999999999


Q ss_pred             cCCCCCCCCCcCCCcceeeccCCCCCCCCChHHHHHHHHHHHHHHhhhcEeeecCC--CCCCCcccccccccccCCceeE
Q 039713          422 IGEDGKSQLDVRGQHYHYIPFGSGRRVCPGTTLALLMVQTTLAAMIQCFDWKVNGG--DGTVDMEEAVGITLPRAHSLVC  499 (511)
Q Consensus       422 ~~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~~~~ll~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~  499 (511)
                      ++++..    ....+..++|||+|+|.|+|++||++|++++++.||++|+|+..++  ...++++...|+...++.++.+
T Consensus       419 l~~~~~----~~~~~~~~~pFg~G~R~C~G~~~A~~el~~~la~ll~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  494 (502)
T PLN02966        419 LEKEVD----FKGTDYEFIPFGSGRRMCPGMRLGAAMLEVPYANLLLNFNFKLPNGMKPDDINMDVMTGLAMHKSQHLKL  494 (502)
T ss_pred             cCCCCC----cCCCcCCccCCCCCCCCCCCHHHHHHHHHHHHHHHHHhceeeCCCCCCcccCCcccccCeeeccCCCeEE
Confidence            975321    1124568999999999999999999999999999999999994332  2223444455766655556654


Q ss_pred             eee
Q 039713          500 VPI  502 (511)
Q Consensus       500 ~~~  502 (511)
                      ..+
T Consensus       495 ~~~  497 (502)
T PLN02966        495 VPE  497 (502)
T ss_pred             EEE
Confidence            444


No 10 
>PLN02394 trans-cinnamate 4-monooxygenase
Probab=100.00  E-value=4.5e-77  Score=589.19  Aligned_cols=473  Identities=28%  Similarity=0.509  Sum_probs=359.2

Q ss_pred             HHhhcCCCCCCCCCCCCCCccccccccCCC-ccHHHHHHHHhhCCeEEEecCCccEEEecCHHHHHHHHHhccccccCCC
Q 039713           24 ILRRSKRTSYFPPSPMALPIIGHLHLLAPI-PHQALHKLSIRYGPLIHFRLGSVPCVAVCSADVAKDFFKTHETSILNRP  102 (511)
Q Consensus        24 ~~~~~~~~~~~ppgp~~~P~~G~~~~~~~~-~~~~~~~~~~kyG~v~~~~~g~~~~v~v~dp~~~~~i~~~~~~~~~~~~  102 (511)
                      +.+...++.+.||||+++|++|++..+..+ .+..+.+|+++||+||++++|++++|+|+||+.+++++.+++..|.+++
T Consensus        21 ~~~~~~~~~~~pPgp~~~p~~g~l~~~~~~~~~~~~~~~~~~yG~v~~i~~g~~~~v~v~dpe~i~~il~~~~~~~~~r~  100 (503)
T PLN02394         21 VSKLRGKKLKLPPGPAAVPIFGNWLQVGDDLNHRNLAEMAKKYGDVFLLRMGQRNLVVVSSPELAKEVLHTQGVEFGSRT  100 (503)
T ss_pred             HHHHhcCcCCCCcCCCCCCeeeeHHhcCCCchhHHHHHHHHHhCCeEEEEcCCeeEEEeCCHHHHHHHHHhCCccccCCC
Confidence            444455667889999999999999888544 5789999999999999999999999999999999999987776777665


Q ss_pred             cccchhhhccCCcceeeccCchhhhhhhhhHHHhcCchHHHhhhhhhHHHHHHHHHHHHHHHcc-CCCceehHHHHHHHH
Q 039713          103 FLINVDYITYGSADFLFAPYGPYWKFMKKICMTQLLGGQTLNQFLPIRFEEIRRFIRYVLKKAK-ASEEVDVGGQLIRLT  181 (511)
Q Consensus       103 ~~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~i~~~~~~ll~~l~~~~~-~~~~vdl~~~~~~~~  181 (511)
                      .......+...+.+.++..+|+.|+++||.+..++|+.++++.+.+.+.++++++++.+.+... .++.+|+.+.+..++
T Consensus       101 ~~~~~~~~~g~~~~~l~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~i~~~v~~lv~~l~~~~~~~~~~v~~~~~~~~~~  180 (503)
T PLN02394        101 RNVVFDIFTGKGQDMVFTVYGDHWRKMRRIMTVPFFTNKVVQQYRYGWEEEADLVVEDVRANPEAATEGVVIRRRLQLMM  180 (503)
T ss_pred             CcchHhHhccCCCceeecCCCHHHHHHHHHHHHHhcChHHHHHhhHHHHHHHHHHHHHHHHhhhccCCcEecHHHHHHHH
Confidence            4433333322233567788899999999998668999999999999999999999999876532 245699999999999


Q ss_pred             HHHHHHHhhccccCCChH-HHHHHHHHHHHHHhhhccC--ccccccchhhcccccchHHHHHHHHHHHHH-HHHHHHHHH
Q 039713          182 NDVVTRMTMNYRCSDNEE-EADEMRKVVSAATELTGKF--NLADYIWFCKFLDLQGFGKRLKETLEKFDE-MMERIIKEH  257 (511)
Q Consensus       182 ~~vi~~~~fG~~~~~~~~-~~~~~~~~~~~~~~~~~~~--~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~  257 (511)
                      +|+++.++||.+++..++ ....+.............+  .....+|++... .....+........... +...+++++
T Consensus       181 ~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~  259 (503)
T PLN02394        181 YNIMYRMMFDRRFESEDDPLFLKLKALNGERSRLAQSFEYNYGDFIPILRPF-LRGYLKICQDVKERRLALFKDYFVDER  259 (503)
T ss_pred             HHHHHHHHhCCCcccccchhHHHHHHHHHHHHHHhcccccchhhhchHHHHH-hhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999998865322 1222222222222222111  122333433221 11111222222222222 223345555


Q ss_pred             HHHHHhhhhcCCCCCCCcHHHHHHhhcccccccccCCHHHHHHHHHHHhhhcCCChHHHHHHHHHHHhcCchHHHHHHHH
Q 039713          258 QEARKINEEAGNDYTPNDLLDILLDISEDESSEIKLSRENIKSFIADMFAAGSDTPAITIEWALAQLINHPDVMKKAREE  337 (511)
Q Consensus       258 ~~~~~~~~~~~~~~~~~dl~~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tta~~l~~~l~~L~~~P~~~~~l~~E  337 (511)
                      ++..+..+.  ......|+++.|+++..+    ..++++++..++..+++||+||||++++|++++|++||++|+||++|
T Consensus       260 ~~~~~~~~~--~~~~~~d~l~~ll~~~~~----~~l~~~~i~~~~~~~~~AG~dTTa~tl~~~l~~L~~~P~vq~kl~~E  333 (503)
T PLN02394        260 KKLMSAKGM--DKEGLKCAIDHILEAQKK----GEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRDE  333 (503)
T ss_pred             HHHhhhccC--CcchhhhHHHHHHhcccc----CCCCHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHcCHHHHHHHHHH
Confidence            432211000  011246899999986432    24899999999999999999999999999999999999999999999


Q ss_pred             HhhhhCCCCccCccccCCChhHHHHHHHhhccCC-CCccc-cccCCCeeecCeeeCCCCEEEeehhhcccCCCCCCCCCC
Q 039713          338 IDSVVGKSRLVEESDIVDLPYLQAIVKEVLRLHP-TPMAV-RESTESFTINGYEIPAKTRVFINVWAICRDPKYWENPFE  415 (511)
Q Consensus       338 i~~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~p-~~~~~-R~~~~~~~l~g~~Ipkg~~v~~~~~~~~~d~~~~~dp~~  415 (511)
                      |+++++.++.++++++.+||||+|||+|+||++| +|... |.+.+|++++||.|||||.|.++.|++||||++|+||++
T Consensus       334 i~~v~~~~~~~~~~~l~~lpyl~avi~EtlRl~p~~~~~~~r~~~~d~~i~g~~IP~Gt~V~~~~~~~~rd~~~~~~P~~  413 (503)
T PLN02394        334 LDTVLGPGNQVTEPDTHKLPYLQAVVKETLRLHMAIPLLVPHMNLEDAKLGGYDIPAESKILVNAWWLANNPELWKNPEE  413 (503)
T ss_pred             HHHHhCCCCCCCHhHHhhCHHHHHHHHHHHhcCCCcccccceecCCCcccCCEEeCCCCEEEEchHHHhCCcccCCCccc
Confidence            9999987677899999999999999999999999 88886 888999999999999999999999999999999999999


Q ss_pred             CCCCcccCCCCCCCCCcCCCcceeeccCCCCCCCCChHHHHHHHHHHHHHHhhhcEeeecCCCCCCCcccccc-cccccC
Q 039713          416 FCPERFIGEDGKSQLDVRGQHYHYIPFGSGRRVCPGTTLALLMVQTTLAAMIQCFDWKVNGGDGTVDMEEAVG-ITLPRA  494 (511)
Q Consensus       416 F~P~R~~~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~-~~~~~~  494 (511)
                      |+||||+++++...  .......++|||.|+|.|+|++||++|+++++|.|+++|+|++.++.+.++.....+ .++..+
T Consensus       414 F~PeRwl~~~~~~~--~~~~~~~~~pFg~G~R~CiG~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~  491 (503)
T PLN02394        414 FRPERFLEEEAKVE--ANGNDFRFLPFGVGRRSCPGIILALPILGIVLGRLVQNFELLPPPGQSKIDVSEKGGQFSLHIA  491 (503)
T ss_pred             cCccccCCCCCccc--ccCCCCceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHceeEeCCCCCcCccccccCceeeccC
Confidence            99999997532111  112356799999999999999999999999999999999999544332345544443 566567


Q ss_pred             CceeEeeeecC
Q 039713          495 HSLVCVPITML  505 (511)
Q Consensus       495 ~~~~~~~~~r~  505 (511)
                      .+++|++++|.
T Consensus       492 ~~~~~~~~~r~  502 (503)
T PLN02394        492 KHSTVVFKPRS  502 (503)
T ss_pred             CCceEEeecCC
Confidence            79999999995


No 11 
>PLN00168 Cytochrome P450; Provisional
Probab=100.00  E-value=6e-77  Score=588.27  Aligned_cols=475  Identities=25%  Similarity=0.433  Sum_probs=365.8

Q ss_pred             CCCCCCCCCCCCCCccccccccC---CCccHHHHHHHHhhCCeEEEecCCccEEEecCHHHHHHHHHhccccccCCCccc
Q 039713           29 KRTSYFPPSPMALPIIGHLHLLA---PIPHQALHKLSIRYGPLIHFRLGSVPCVAVCSADVAKDFFKTHETSILNRPFLI  105 (511)
Q Consensus        29 ~~~~~~ppgp~~~P~~G~~~~~~---~~~~~~~~~~~~kyG~v~~~~~g~~~~v~v~dp~~~~~i~~~~~~~~~~~~~~~  105 (511)
                      ++..+.||||+++|++|++..+.   .+++..+.+|+++||+||++++|+.++|+|+||+++++++.++...|+.++...
T Consensus        31 ~~~~~lpPgp~~~pl~G~l~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dpe~~~~il~~~~~~f~~rp~~~  110 (519)
T PLN00168         31 KKGRRLPPGPPAVPLLGSLVWLTNSSADVEPLLRRLIARYGPVVSLRVGSRLSVFVADRRLAHAALVERGAALADRPAVA  110 (519)
T ss_pred             CCCCCCCcCCCCCcccccHHhhccccccHHHHHHHHHHHhCCeEEEEcCCccEEEECCHHHHHHHHHhcCCccccCCccc
Confidence            34557899999999999987653   357788999999999999999999999999999999999998888888887644


Q ss_pred             chhhhccCCcceeeccCchhhhhhhhhHHHhcCchHHHhhhhhhHHHHHHHHHHHHHHHccCCCceehHHHHHHHHHHHH
Q 039713          106 NVDYITYGSADFLFAPYGPYWKFMKKICMTQLLGGQTLNQFLPIRFEEIRRFIRYVLKKAKASEEVDVGGQLIRLTNDVV  185 (511)
Q Consensus       106 ~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~i~~~~~~ll~~l~~~~~~~~~vdl~~~~~~~~~~vi  185 (511)
                      ....+..+.....+..+|+.|+++||.+..++|+.++++.+.+.+.++++.+++.+.+....++.+|+.+.+..++.+++
T Consensus       111 ~~~~~~~~~~~~~~~~~G~~Wk~~Rr~~~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~v~~~~~~~~~~~~ii  190 (519)
T PLN00168        111 SSRLLGESDNTITRSSYGPVWRLLRRNLVAETLHPSRVRLFAPARAWVRRVLVDKLRREAEDAAAPRVVETFQYAMFCLL  190 (519)
T ss_pred             chhhhccCCCceeCCCCCHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcCHHHHHHHHHHHHH
Confidence            33333222212222478999999998666799999999999999999999999999876555567899999999999999


Q ss_pred             HHHhhccccCCChHHHHHHHHHHHHHHhhh-ccCccccccchhhcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 039713          186 TRMTMNYRCSDNEEEADEMRKVVSAATELT-GKFNLADYIWFCKFLDLQGFGKRLKETLEKFDEMMERIIKEHQEARKIN  264 (511)
Q Consensus       186 ~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  264 (511)
                      +.++||.+++..  ....+........... ....+..++|.+.+.......++..+..+.+.+++..+++++++.....
T Consensus       191 ~~~~fG~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  268 (519)
T PLN00168        191 VLMCFGERLDEP--AVRAIAAAQRDWLLYVSKKMSVFAFFPAVTKHLFRGRLQKALALRRRQKELFVPLIDARREYKNHL  268 (519)
T ss_pred             HHHHcCCCcChh--hHHHHHHHHHHHHHHhcCCCCHHHhCcchhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Confidence            999999987632  2223333333222111 1122233445332211112234455677888888888888876543210


Q ss_pred             hhcC--C---CCCCCcHHHHHHhhcccccccccCCHHHHHHHHHHHhhhcCCChHHHHHHHHHHHhcCchHHHHHHHHHh
Q 039713          265 EEAG--N---DYTPNDLLDILLDISEDESSEIKLSRENIKSFIADMFAAGSDTPAITIEWALAQLINHPDVMKKAREEID  339 (511)
Q Consensus       265 ~~~~--~---~~~~~dl~~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tta~~l~~~l~~L~~~P~~~~~l~~Ei~  339 (511)
                      ++..  .   .....|+++.|++...++..+..++++++.++++.+++||+|||+++++|++++|++||++|+|+++||+
T Consensus       269 ~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~lt~~~i~~~~~~l~~AG~dTTa~~l~~~l~~L~~~P~~q~kl~~Ei~  348 (519)
T PLN00168        269 GQGGEPPKKETTFEHSYVDTLLDIRLPEDGDRALTDDEIVNLCSEFLNAGTDTTSTALQWIMAELVKNPSIQSKLHDEIK  348 (519)
T ss_pred             cccCccccccccccccHHHHHHhhhccccccCCCCHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHhCHHHHHHHHHHHH
Confidence            0000  0   0114689999997643322234699999999999999999999999999999999999999999999999


Q ss_pred             hhhCCC-CccCccccCCChhHHHHHHHhhccCC-CCccc-cccCCCeeecCeeeCCCCEEEeehhhcccCCCCCCCCCCC
Q 039713          340 SVVGKS-RLVEESDIVDLPYLQAIVKEVLRLHP-TPMAV-RESTESFTINGYEIPAKTRVFINVWAICRDPKYWENPFEF  416 (511)
Q Consensus       340 ~~~~~~-~~~~~~~~~~lp~l~a~i~E~lRl~p-~~~~~-R~~~~~~~l~g~~Ipkg~~v~~~~~~~~~d~~~~~dp~~F  416 (511)
                      ++++++ +.++.+++.+||||+|||+|++|++| ++... |.+.+|++++||.|||||.|.++.+++||||++|+||++|
T Consensus       349 ~v~~~~~~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~R~~~~d~~~~g~~IpkGt~v~~~~~~~~~d~~~~~~p~~F  428 (519)
T PLN00168        349 AKTGDDQEEVSEEDVHKMPYLKAVVLEGLRKHPPAHFVLPHKAAEDMEVGGYLIPKGATVNFMVAEMGRDEREWERPMEF  428 (519)
T ss_pred             HHhCCCCCCCCHHHhhCChHHHHHHHHHhhcCCCCcccCCccCCCCccCCCEEECCCCEEEEChHHHhcCccccCCcccc
Confidence            999753 56899999999999999999999999 87775 9999999999999999999999999999999999999999


Q ss_pred             CCCcccCCCCCCCCCc-CCCcceeeccCCCCCCCCChHHHHHHHHHHHHHHhhhcEeeecCCCCCCCcccccccccccCC
Q 039713          417 CPERFIGEDGKSQLDV-RGQHYHYIPFGSGRRVCPGTTLALLMVQTTLAAMIQCFDWKVNGGDGTVDMEEAVGITLPRAH  495 (511)
Q Consensus       417 ~P~R~~~~~~~~~~~~-~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~  495 (511)
                      +||||++++.....+. ...+..++|||+|+|.|+|++||++|++++++.|+++|+|++.++ .+++.....+.++.++.
T Consensus       429 ~PeRf~~~~~~~~~~~~~~~~~~~~pFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~-~~~~~~~~~~~~~~~~~  507 (519)
T PLN00168        429 VPERFLAGGDGEGVDVTGSREIRMMPFGVGRRICAGLGIAMLHLEYFVANMVREFEWKEVPG-DEVDFAEKREFTTVMAK  507 (519)
T ss_pred             CcccCCCCCCCccccccccCCcceeCCCCCCCCCCcHHHHHHHHHHHHHHHHHHccceeCCC-CcCChhhhceeEEeecC
Confidence            9999997531111011 123457999999999999999999999999999999999996432 23344333455566677


Q ss_pred             ceeEeeeecCC
Q 039713          496 SLVCVPITMLD  506 (511)
Q Consensus       496 ~~~~~~~~r~~  506 (511)
                      +++|.+++|..
T Consensus       508 ~~~~~~~~R~~  518 (519)
T PLN00168        508 PLRARLVPRRT  518 (519)
T ss_pred             CcEEEEEeccC
Confidence            89999999864


No 12 
>PTZ00404 cytochrome P450; Provisional
Probab=100.00  E-value=1e-76  Score=583.48  Aligned_cols=451  Identities=26%  Similarity=0.407  Sum_probs=354.5

Q ss_pred             CCCCCCCCCCCCCCccccccccCCCccHHHHHHHHhhCCeEEEecCCccEEEecCHHHHHHHHHhccccccCCCcccchh
Q 039713           29 KRTSYFPPSPMALPIIGHLHLLAPIPHQALHKLSIRYGPLIHFRLGSVPCVAVCSADVAKDFFKTHETSILNRPFLINVD  108 (511)
Q Consensus        29 ~~~~~~ppgp~~~P~~G~~~~~~~~~~~~~~~~~~kyG~v~~~~~g~~~~v~v~dp~~~~~i~~~~~~~~~~~~~~~~~~  108 (511)
                      +.+.+.+|||+++|++|+++.+..+++..+.+|+++||+||++++|+.++|+++||+++++++.++...|..++......
T Consensus        25 ~~~~~~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~r~~~~~~~  104 (482)
T PTZ00404         25 KIHKNELKGPIPIPILGNLHQLGNLPHRDLTKMSKKYGGIFRIWFADLYTVVLSDPILIREMFVDNFDNFSDRPKIPSIK  104 (482)
T ss_pred             hccCCCCCCCCCCCeeccHhhhcccHHHHHHHHHHHhCCeeEEEecCCCEEEECCHHHHHHHHHhcchhhcCCCCcceee
Confidence            34467789999999999998887789999999999999999999999999999999999999987766777666543322


Q ss_pred             hhccCCcceeeccCchhhhhhhhhHHHhcCchHHHhhhhhhHHHHHHHHHHHHHHHccCCCceehHHHHHHHHHHHHHHH
Q 039713          109 YITYGSADFLFAPYGPYWKFMKKICMTQLLGGQTLNQFLPIRFEEIRRFIRYVLKKAKASEEVDVGGQLIRLTNDVVTRM  188 (511)
Q Consensus       109 ~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~i~~~~~~ll~~l~~~~~~~~~vdl~~~~~~~~~~vi~~~  188 (511)
                      ....+  ..++..+|+.|+++|+.+. +.|+...++.+.+.+.+.++.+++.+.+....++.+|+...+.++++|+++.+
T Consensus       105 ~~~~~--~~l~~~~g~~w~~~Rk~~~-~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~dvi~~~  181 (482)
T PTZ00404        105 HGTFY--HGIVTSSGEYWKRNREIVG-KAMRKTNLKHIYDLLDDQVDVLIESMKKIESSGETFEPRYYLTKFTMSAMFKY  181 (482)
T ss_pred             eeccC--CceeccChHHHHHHHHHHH-HHHhhhccccHHHHHHHHHHHHHHHHHHHHhcCCccCHHHHHHHHHHHHHHHH
Confidence            11122  3466779999999999985 99999999999999999999999999775555678999999999999999999


Q ss_pred             hhccccCCCh----HHHHHHHHHHHHHHhhhccCccccccchhhcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 039713          189 TMNYRCSDNE----EEADEMRKVVSAATELTGKFNLADYIWFCKFLDLQGFGKRLKETLEKFDEMMERIIKEHQEARKIN  264 (511)
Q Consensus       189 ~fG~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  264 (511)
                      +||.+++..+    +....+.+.+..++...........++++... .........+..+.+.+++.+.++++++...  
T Consensus       182 ~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~--  258 (482)
T PTZ00404        182 IFNEDISFDEDIHNGKLAELMGPMEQVFKDLGSGSLFDVIEITQPL-YYQYLEHTDKNFKKIKKFIKEKYHEHLKTID--  258 (482)
T ss_pred             HhccccccccccchhHHHHHHHHHHHHHHHhCCCchhhhhhHhhhh-hHHHHHHHHHHHHHHHHHHHHHHHHHHHccC--
Confidence            9999876432    12245566566555544332222222222211 0011122233445555555555554432211  


Q ss_pred             hhcCCCCCCCcHHHHHHhhcccccccccCCHHHHHHHHHHHhhhcCCChHHHHHHHHHHHhcCchHHHHHHHHHhhhhCC
Q 039713          265 EEAGNDYTPNDLLDILLDISEDESSEIKLSRENIKSFIADMFAAGSDTPAITIEWALAQLINHPDVMKKAREEIDSVVGK  344 (511)
Q Consensus       265 ~~~~~~~~~~dl~~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tta~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~  344 (511)
                        .   ....|+++.|+++..+.   .....+++.+++..+++||+|||+++++|++++|++||++|+|+++||++++++
T Consensus       259 --~---~~~~dll~~ll~~~~~~---~~~~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~vq~kl~~Ei~~v~~~  330 (482)
T PTZ00404        259 --P---EVPRDLLDLLIKEYGTN---TDDDILSILATILDFFLAGVDTSATSLEWMVLMLCNYPEIQEKAYNEIKSTVNG  330 (482)
T ss_pred             --C---CCcccHHHHHHHHhccC---CcccHHHHHHHHHHHHHhccchHHHHHHHHHHHHHcCcHHHHHHHHHHHHHhcC
Confidence              1   12578999999764211   112334588999999999999999999999999999999999999999999987


Q ss_pred             CCccCccccCCChhHHHHHHHhhccCC-CCcc-ccccCCCeee-cCeeeCCCCEEEeehhhcccCCCCCCCCCCCCCCcc
Q 039713          345 SRLVEESDIVDLPYLQAIVKEVLRLHP-TPMA-VRESTESFTI-NGYEIPAKTRVFINVWAICRDPKYWENPFEFCPERF  421 (511)
Q Consensus       345 ~~~~~~~~~~~lp~l~a~i~E~lRl~p-~~~~-~R~~~~~~~l-~g~~Ipkg~~v~~~~~~~~~d~~~~~dp~~F~P~R~  421 (511)
                      +..++++++.+||||+|||+||||++| ++.. .|.+.+|+++ +||.|||||.|.++.+++||||++||||++||||||
T Consensus       331 ~~~~~~~~l~~L~yl~avi~EtlRl~p~~~~~~~R~~~~d~~l~~g~~Ip~Gt~V~~~~~a~hrdp~~~~dP~~F~PeRw  410 (482)
T PTZ00404        331 RNKVLLSDRQSTPYTVAIIKETLRYKPVSPFGLPRSTSNDIIIGGGHFIPKDAQILINYYSLGRNEKYFENPEQFDPSRF  410 (482)
T ss_pred             CCCCCccccccChHHHHHHHHHHHhcCCcccccceeccCCEEecCCeEECCCCEEEeeHHHhhCCccccCCccccCcccc
Confidence            677899999999999999999999999 8875 5999999999 999999999999999999999999999999999999


Q ss_pred             cCCCCCCCCCcCCCcceeeccCCCCCCCCChHHHHHHHHHHHHHHhhhcEeeecCCCCCCCcccccccccccCCceeEee
Q 039713          422 IGEDGKSQLDVRGQHYHYIPFGSGRRVCPGTTLALLMVQTTLAAMIQCFDWKVNGGDGTVDMEEAVGITLPRAHSLVCVP  501 (511)
Q Consensus       422 ~~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  501 (511)
                      +++.         .+.+++|||+|+|.|+|++||++|++++++.|+++|+|+..++ ++++.....++++. +.++.|++
T Consensus       411 l~~~---------~~~~~~pFg~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~-~~~~~~~~~~~~~~-~~~~~v~~  479 (482)
T PTZ00404        411 LNPD---------SNDAFMPFSIGPRNCVGQQFAQDELYLAFSNIILNFKLKSIDG-KKIDETEEYGLTLK-PNKFKVLL  479 (482)
T ss_pred             CCCC---------CCCceeccCCCCCCCccHHHHHHHHHHHHHHHHHhcEEecCCC-CCCCcccccceeec-CCCceeee
Confidence            8641         3458999999999999999999999999999999999985432 23333333456666 56799999


Q ss_pred             eec
Q 039713          502 ITM  504 (511)
Q Consensus       502 ~~r  504 (511)
                      ++|
T Consensus       480 ~~R  482 (482)
T PTZ00404        480 EKR  482 (482)
T ss_pred             ecC
Confidence            987


No 13 
>PLN02290 cytokinin trans-hydroxylase
Probab=100.00  E-value=1.9e-75  Score=578.88  Aligned_cols=452  Identities=21%  Similarity=0.364  Sum_probs=353.7

Q ss_pred             CCCCCCCCCCCccccccccC-------------------CCccHHHHHHHHhhCCeEEEecCCccEEEecCHHHHHHHHH
Q 039713           32 SYFPPSPMALPIIGHLHLLA-------------------PIPHQALHKLSIRYGPLIHFRLGSVPCVAVCSADVAKDFFK   92 (511)
Q Consensus        32 ~~~ppgp~~~P~~G~~~~~~-------------------~~~~~~~~~~~~kyG~v~~~~~g~~~~v~v~dp~~~~~i~~   92 (511)
                      +.-||||+++|++||++.+.                   .+....+.+|+++||++|++++|+.++|+++||+++++++.
T Consensus        41 ~~~~PGP~~~P~iGnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~v~~il~  120 (516)
T PLN02290         41 RQGVRGPKPRPLTGNILDVSALVSQSTSKDMDSIHHDIVGRLLPHYVAWSKQYGKRFIYWNGTEPRLCLTETELIKELLT  120 (516)
T ss_pred             HcCCCCCCCCcCCCCHHHHHHHHHHhhcCCCCCCCcccccccchHHHHHHHHhCCeEEEccCCccEEEECCHHHHHHHHh
Confidence            44699999999999987763                   12334578899999999999999999999999999999998


Q ss_pred             hccccccCCCcccch-hhhccCCcceeeccCchhhhhhhhhHHHhcCchHHHhhhhhhHHHHHHHHHHHHHHHccCC-Cc
Q 039713           93 THETSILNRPFLINV-DYITYGSADFLFAPYGPYWKFMKKICMTQLLGGQTLNQFLPIRFEEIRRFIRYVLKKAKAS-EE  170 (511)
Q Consensus        93 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~i~~~~~~ll~~l~~~~~~~-~~  170 (511)
                      ++ ..+..++..... .....|  ..++..+|+.|+++|+.+. +.|+..+++.+.+.+.++++.+++.+.+....+ +.
T Consensus       121 ~~-~~~~~r~~~~~~~~~~~~g--~~l~~~~g~~Wk~~Rk~~~-~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~~  196 (516)
T PLN02290        121 KY-NTVTGKSWLQQQGTKHFIG--RGLLMANGADWYHQRHIAA-PAFMGDRLKGYAGHMVECTKQMLQSLQKAVESGQTE  196 (516)
T ss_pred             cC-CCCCCCcchhhhHHHHHhc--CCccccCchHHHHHHhhcc-cccCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCce
Confidence            76 345555532211 111123  2366678999999999985 999999999999999999999999998754433 57


Q ss_pred             eehHHHHHHHHHHHHHHHhhccccCCChHHHHHHHHHHHHHHhhhccCccccccchhhcccccchHHHHHHHHHHHHHHH
Q 039713          171 VDVGGQLIRLTNDVVTRMTMNYRCSDNEEEADEMRKVVSAATELTGKFNLADYIWFCKFLDLQGFGKRLKETLEKFDEMM  250 (511)
Q Consensus       171 vdl~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~  250 (511)
                      +|+.+.+..+++|+++.++||.++...++    +.+.+..+............+|++.+++ .+..+......+.+.+++
T Consensus       197 vd~~~~~~~~~~~vi~~~~fG~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~p~~~~~p-~~~~~~~~~~~~~~~~~~  271 (516)
T PLN02290        197 VEIGEYMTRLTADIISRTEFDSSYEKGKQ----IFHLLTVLQRLCAQATRHLCFPGSRFFP-SKYNREIKSLKGEVERLL  271 (516)
T ss_pred             EEhHHHHHHHHHHHHHHHHcCCccccchH----HHHHHHHHHHHHHHhhhhhcCchhhhCC-ChhHHHHHHHHHHHHHHH
Confidence            99999999999999999999998764321    2222222222211111111234433332 223345666777888888


Q ss_pred             HHHHHHHHHHHHhhhhcCCCCCCCcHHHHHHhhcccc-cccccCCHHHHHHHHHHHhhhcCCChHHHHHHHHHHHhcCch
Q 039713          251 ERIIKEHQEARKINEEAGNDYTPNDLLDILLDISEDE-SSEIKLSRENIKSFIADMFAAGSDTPAITIEWALAQLINHPD  329 (511)
Q Consensus       251 ~~~i~~~~~~~~~~~~~~~~~~~~dl~~~ll~~~~~~-~~~~~l~~~~i~~~~~~~~~ag~~tta~~l~~~l~~L~~~P~  329 (511)
                      .+.++++++..+...+   .....|+++.+++...++ .++..++++++.++++.+++||+|||+++++|++++|++||+
T Consensus       272 ~~~i~~~~~~~~~~~~---~~~~~d~l~~ll~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~tl~~~l~~L~~~P~  348 (516)
T PLN02290        272 MEIIQSRRDCVEIGRS---SSYGDDLLGMLLNEMEKKRSNGFNLNLQLIMDECKTFFFAGHETTALLLTWTLMLLASNPT  348 (516)
T ss_pred             HHHHHHHHHHhhcccC---CCCCCCHHHHHHHhccccCCCCCCCCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCHH
Confidence            8888887654332111   113578999999764322 123358899999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhhhhCCCCccCccccCCChhHHHHHHHhhccCC-CCccccccCCCeeecCeeeCCCCEEEeehhhcccCCC
Q 039713          330 VMKKAREEIDSVVGKSRLVEESDIVDLPYLQAIVKEVLRLHP-TPMAVRESTESFTINGYEIPAKTRVFINVWAICRDPK  408 (511)
Q Consensus       330 ~~~~l~~Ei~~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~p-~~~~~R~~~~~~~l~g~~Ipkg~~v~~~~~~~~~d~~  408 (511)
                      +|+|+++||+++++.+ .++.+++++||||+|||+||||++| ++...|.+.+|++++||.|||||.|+++.+++||||+
T Consensus       349 vq~kl~~Ei~~v~~~~-~~~~~~l~~lpYl~avi~EtlRl~p~~~~~~R~~~~d~~i~g~~IP~Gt~V~~~~~~~~rdp~  427 (516)
T PLN02290        349 WQDKVRAEVAEVCGGE-TPSVDHLSKLTLLNMVINESLRLYPPATLLPRMAFEDIKLGDLHIPKGLSIWIPVLAIHHSEE  427 (516)
T ss_pred             HHHHHHHHHHHHhCCC-CCCHHHHhcChHHHHHHHHHHHcCCCccccceeecCCeeECCEEECCCCEEEecHHHhcCChh
Confidence            9999999999999864 7899999999999999999999999 8876799999999999999999999999999999999


Q ss_pred             CC-CCCCCCCCCcccCCCCCCCCCcCCCcceeeccCCCCCCCCChHHHHHHHHHHHHHHhhhcEeeecCCCCCCCccccc
Q 039713          409 YW-ENPFEFCPERFIGEDGKSQLDVRGQHYHYIPFGSGRRVCPGTTLALLMVQTTLAAMIQCFDWKVNGGDGTVDMEEAV  487 (511)
Q Consensus       409 ~~-~dp~~F~P~R~~~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~  487 (511)
                      +| +||++||||||++++   .    .....++|||.|+|.|+|+++|++|+++++++|+++|+|+..++..   .....
T Consensus       428 ~~~~dP~~F~PeRfl~~~---~----~~~~~~~pFG~G~R~C~G~~lA~~el~l~la~ll~~f~~~~~~~~~---~~~~~  497 (516)
T PLN02290        428 LWGKDANEFNPDRFAGRP---F----APGRHFIPFAAGPRNCIGQAFAMMEAKIILAMLISKFSFTISDNYR---HAPVV  497 (516)
T ss_pred             hhCCChhhcCccccCCCC---C----CCCCeEecCCCCCCCCccHHHHHHHHHHHHHHHHHhceEeeCCCcc---cCccc
Confidence            99 899999999999542   0    1234799999999999999999999999999999999999554211   11123


Q ss_pred             ccccccCCceeEeeeecCC
Q 039713          488 GITLPRAHSLVCVPITMLD  506 (511)
Q Consensus       488 ~~~~~~~~~~~~~~~~r~~  506 (511)
                      +.+..|..+++|++++|.+
T Consensus       498 ~~~~~p~~~~~~~~~~~~~  516 (516)
T PLN02290        498 VLTIKPKYGVQVCLKPLNP  516 (516)
T ss_pred             eeeecCCCCCeEEEEeCCC
Confidence            5677888999999999864


No 14 
>PLN02655 ent-kaurene oxidase
Probab=100.00  E-value=2.2e-75  Score=569.94  Aligned_cols=452  Identities=28%  Similarity=0.449  Sum_probs=359.6

Q ss_pred             CCCCCCCCccccccccC-CCccHHHHHHHHhhCCeEEEecCCccEEEecCHHHHHHHHHhccccccCCCcccchhhhccC
Q 039713           35 PPSPMALPIIGHLHLLA-PIPHQALHKLSIRYGPLIHFRLGSVPCVAVCSADVAKDFFKTHETSILNRPFLINVDYITYG  113 (511)
Q Consensus        35 ppgp~~~P~~G~~~~~~-~~~~~~~~~~~~kyG~v~~~~~g~~~~v~v~dp~~~~~i~~~~~~~~~~~~~~~~~~~~~~~  113 (511)
                      ||||+++|++||++++. .+++..+.+|+++||+||++++|++++|+|+||+++++++.++...|+.++.......+..+
T Consensus         1 ppgp~~lP~iG~l~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~pe~~k~il~~~~~~f~~r~~~~~~~~~~~~   80 (466)
T PLN02655          1 VPAVPGLPVIGNLLQLKEKKPHRTFTKWSEIYGPIYTIRTGASSVVVLNSTEVAKEAMVTKFSSISTRKLSKALTVLTRD   80 (466)
T ss_pred             CcCCCCCCccccHHHcCCCchhHHHHHHHHHhCCeEEEEECCEeEEEeCCHHHHHHHHHhcCchhcCCChhhHHHHHhcC
Confidence            78999999999998885 56899999999999999999999999999999999999999888888877655443333332


Q ss_pred             CcceeeccCchhhhhhhhhHHHhcCchHHHhhhhhhHHHHHHHHHHHHHHHcc--CCCceehHHHHHHHHHHHHHHHhhc
Q 039713          114 SADFLFAPYGPYWKFMKKICMTQLLGGQTLNQFLPIRFEEIRRFIRYVLKKAK--ASEEVDVGGQLIRLTNDVVTRMTMN  191 (511)
Q Consensus       114 ~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~i~~~~~~ll~~l~~~~~--~~~~vdl~~~~~~~~~~vi~~~~fG  191 (511)
                      +..+....+|+.|+.+||.+..++|+...++.+.+.+.+.++.+++.+.+...  .++++|+.+.+..+++|+++.++||
T Consensus        81 ~~~~~~~~~g~~wr~~Rr~~~~~~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~vd~~~~~~~~t~dvi~~~~fG  160 (466)
T PLN02655         81 KSMVATSDYGDFHKMVKRYVMNNLLGANAQKRFRDTRDMLIENMLSGLHALVKDDPHSPVNFRDVFENELFGLSLIQALG  160 (466)
T ss_pred             CCceeeCCCcHHHHHHHHHHHHHhcCchHHHHhHHHHHHHHHHHHHHHHhhccccCCCceeHHHHHHHHHHHHHHHHHhc
Confidence            22233334689999999988778899888888999888898888888876543  4678999999999999999999999


Q ss_pred             cccCCCh-HH-------HHHHHHHHHHHHhhhccCccccccchhhcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 039713          192 YRCSDNE-EE-------ADEMRKVVSAATELTGKFNLADYIWFCKFLDLQGFGKRLKETLEKFDEMMERIIKEHQEARKI  263 (511)
Q Consensus       192 ~~~~~~~-~~-------~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  263 (511)
                      .+++... +.       ...+...+..+........+.+.+|.+.+++.....+...+....+.++++.+++++++....
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  240 (466)
T PLN02655        161 EDVESVYVEELGTEISKEEIFDVLVHDMMMCAIEVDWRDFFPYLSWIPNKSFETRVQTTEFRRTAVMKALIKQQKKRIAR  240 (466)
T ss_pred             cccccccccccccchhhHHHHHHHHHHHHHHhCCcchhhhhhhhhhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Confidence            8876432 01       122333334444433333334456665554332223333333444556777777766644222


Q ss_pred             hhhcCCCCCCCcHHHHHHhhcccccccccCCHHHHHHHHHHHhhhcCCChHHHHHHHHHHHhcCchHHHHHHHHHhhhhC
Q 039713          264 NEEAGNDYTPNDLLDILLDISEDESSEIKLSRENIKSFIADMFAAGSDTPAITIEWALAQLINHPDVMKKAREEIDSVVG  343 (511)
Q Consensus       264 ~~~~~~~~~~~dl~~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tta~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~  343 (511)
                         .   ....|+++.|++..      ..++++++.++++.+++||+|||+++++|++++|++||++|+++++||+++++
T Consensus       241 ---~---~~~~d~l~~ll~~~------~~ls~~~i~~~~~~~~~ag~dtta~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~  308 (466)
T PLN02655        241 ---G---EERDCYLDFLLSEA------THLTDEQLMMLVWEPIIEAADTTLVTTEWAMYELAKNPDKQERLYREIREVCG  308 (466)
T ss_pred             ---C---CCcccHHHHHHhcc------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHhC
Confidence               1   02468999999763      24899999999999999999999999999999999999999999999999998


Q ss_pred             CCCccCccccCCChhHHHHHHHhhccCC-CCccc-cccCCCeeecCeeeCCCCEEEeehhhcccCCCCCCCCCCCCCCcc
Q 039713          344 KSRLVEESDIVDLPYLQAIVKEVLRLHP-TPMAV-RESTESFTINGYEIPAKTRVFINVWAICRDPKYWENPFEFCPERF  421 (511)
Q Consensus       344 ~~~~~~~~~~~~lp~l~a~i~E~lRl~p-~~~~~-R~~~~~~~l~g~~Ipkg~~v~~~~~~~~~d~~~~~dp~~F~P~R~  421 (511)
                      .+. ++.+++.++||++|||+||||++| ++... |.+.+|++++||.|||||.|+++.+++||||++|+||++|+|+||
T Consensus       309 ~~~-~~~~~l~~l~yl~a~i~EtlRl~p~~~~~~~r~~~~d~~~~g~~ip~gt~v~~~~~~~~~d~~~~~~p~~F~PeR~  387 (466)
T PLN02655        309 DER-VTEEDLPNLPYLNAVFHETLRKYSPVPLLPPRFVHEDTTLGGYDIPAGTQIAINIYGCNMDKKRWENPEEWDPERF  387 (466)
T ss_pred             CCC-CCHHHHhcChHHHHHHHHHhccCCCcCCCCCcccCCCcccCCEEECCCCEEEecHHHhcCCcccCCChhccCcccc
Confidence            644 899999999999999999999999 88876 999999999999999999999999999999999999999999999


Q ss_pred             cCCCCCCCCCcCCCcceeeccCCCCCCCCChHHHHHHHHHHHHHHhhhcEeeecCCCCCCCcccccccccccCCceeEee
Q 039713          422 IGEDGKSQLDVRGQHYHYIPFGSGRRVCPGTTLALLMVQTTLAAMIQCFDWKVNGGDGTVDMEEAVGITLPRAHSLVCVP  501 (511)
Q Consensus       422 ~~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  501 (511)
                      ++++...     .....++|||+|+|.|+|++||+.|+++++++||++|+|+..++...  .....+++..++.++.|.+
T Consensus       388 ~~~~~~~-----~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~  460 (466)
T PLN02655        388 LGEKYES-----ADMYKTMAFGAGKRVCAGSLQAMLIACMAIARLVQEFEWRLREGDEE--KEDTVQLTTQKLHPLHAHL  460 (466)
T ss_pred             CCCCccc-----CCcccccCCCCCCCCCCcHHHHHHHHHHHHHHHHHHeEEEeCCCCcc--ccchhheeEeecCCcEEEE
Confidence            9753111     13467999999999999999999999999999999999995432221  2234577777889999999


Q ss_pred             eecCC
Q 039713          502 ITMLD  506 (511)
Q Consensus       502 ~~r~~  506 (511)
                      ++|++
T Consensus       461 ~~r~~  465 (466)
T PLN02655        461 KPRGS  465 (466)
T ss_pred             eecCC
Confidence            99975


No 15 
>KOG0159 consensus Cytochrome P450 CYP11/CYP12/CYP24/CYP27 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=3.7e-75  Score=530.61  Aligned_cols=453  Identities=25%  Similarity=0.394  Sum_probs=380.1

Q ss_pred             CCCCCCCCCCcccccccc----CCCccHHHHHHHHhhCCeEEEe-cCCccEEEecCHHHHHHHHHhccccccCCCc-ccc
Q 039713           33 YFPPSPMALPIIGHLHLL----APIPHQALHKLSIRYGPLIHFR-LGSVPCVAVCSADVAKDFFKTHETSILNRPF-LIN  106 (511)
Q Consensus        33 ~~ppgp~~~P~~G~~~~~----~~~~~~~~~~~~~kyG~v~~~~-~g~~~~v~v~dp~~~~~i~~~~~~~~~~~~~-~~~  106 (511)
                      ..+|||..+|++|.++.+    ..+.|+....++++|||||+.. +|+...|+|.+|++++.+|+.++ .+..||. ...
T Consensus        50 ~~IP~p~~~~~l~~l~~~~~~~~~~lh~~~~~~~~~YG~I~~~~~~G~~~~V~v~~p~d~E~v~r~EG-~~P~Rp~~~~~  128 (519)
T KOG0159|consen   50 EEIPGPKGLPFLGLLWIWRAGGATKLHQHIVQLHQKYGPIFREGMLGRVDLVHVYNPDDVEKVFRNEG-KYPFRPLLIEP  128 (519)
T ss_pred             hhcCCCCCccHHHHHHHHHhhhhhHHHHHHHHHHHHcCceeeeccCCCCCeEEeeCHHHHHHHHhcCC-CCCCcccccch
Confidence            467999999999998844    3578889999999999999999 89999999999999999998775 5566752 221


Q ss_pred             hhh--hccCCcceeeccCchhhhhhhhhHHHhcCchHHHhhhhhhHHHHHHHHHHHHHHHcc---CCCceehHHHHHHHH
Q 039713          107 VDY--ITYGSADFLFAPYGPYWKFMKKICMTQLLGGQTLNQFLPIRFEEIRRFIRYVLKKAK---ASEEVDVGGQLIRLT  181 (511)
Q Consensus       107 ~~~--~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~i~~~~~~ll~~l~~~~~---~~~~vdl~~~~~~~~  181 (511)
                      +..  -.++...+++..+|++|.+.|..++..++++++++.|.+.+++.+++++..+....+   ...+.|+...+.+++
T Consensus       129 w~~~rd~~~~~~Gl~~~~G~~W~~~Rs~ln~~ll~P~~v~~yl~~l~~V~~DF~~~l~~~r~~~~~~~~~D~~~~l~~ws  208 (519)
T KOG0159|consen  129 WVAYRDFRGGVCGLFLLEGPEWQRLRSALNPLLLQPQAVRRYLPQLNAVSDDFVERLRAQRDPERGELVPDFAQELYRWS  208 (519)
T ss_pred             hhhhHHhhccCCCcccCCCHHHHHHHHHhchhhcCHHHHHHHhhHHHHHHHHHHHHHHHHhcccccccchhHHHHHHHHH
Confidence            111  113334568889999999999999988899999999999999999999999988755   234789999999999


Q ss_pred             HHHHHHHhhccccCCCh----HHHHHHHHHHHHHHhhhccCccccccchhhcccccchHHHHHHHHHHHHHHHHHHHHHH
Q 039713          182 NDVVTRMTMNYRCSDNE----EEADEMRKVVSAATELTGKFNLADYIWFCKFLDLQGFGKRLKETLEKFDEMMERIIKEH  257 (511)
Q Consensus       182 ~~vi~~~~fG~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  257 (511)
                      ++.||.++||.+++...    ++...+.+++..++.......+..  ++++++ .++.++++.++.+.+.++..++|+..
T Consensus       209 lEsi~~V~l~~rlG~L~~~~~~~a~~fi~ai~~~F~~s~~l~~~p--~l~r~~-~t~~wk~~~~~~D~i~~~~~~~Id~~  285 (519)
T KOG0159|consen  209 LESICLVLLGTRLGLLGESPPSEAQQFIDAIKKMFESSAQLMLMP--SLWRYF-PTKVWKDFVRAWDQIFDVGDKYIDNA  285 (519)
T ss_pred             HHHHHHHHHhcccccccCCCCHHHHHHHHHHHHHHHhHHHHHhcc--hHHHhC-CChHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999653    456788888888887665432221  334444 55678889999999999999999998


Q ss_pred             HHHHHhhhhcCCCCCCCcHHHHHHhhcccccccccCCHHHHHHHHHHHhhhcCCChHHHHHHHHHHHhcCchHHHHHHHH
Q 039713          258 QEARKINEEAGNDYTPNDLLDILLDISEDESSEIKLSRENIKSFIADMFAAGSDTPAITIEWALAQLINHPDVMKKAREE  337 (511)
Q Consensus       258 ~~~~~~~~~~~~~~~~~dl~~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tta~~l~~~l~~L~~~P~~~~~l~~E  337 (511)
                      .+..+.+.... ......+...|.++        .++.+++..+++++++||.||||+++.|+||+|++||++|++|++|
T Consensus       286 l~~l~~~~~~~-~~~~~~l~~~L~~~--------~l~~k~~~~~~~dll~aGvDTTs~tl~~~Ly~LarnP~~Q~~L~~E  356 (519)
T KOG0159|consen  286 LEELEKQDSAG-SEYTGSLLELLLRK--------ELSRKDAKANVMDLLAAGVDTTSNTLLWALYELARNPEVQQRLREE  356 (519)
T ss_pred             HHHHHhccccc-cchhHHHHHHHHHc--------cCCHHHHHHHHHHHHHHhccchHHHHHHHHHHHhcChHHHHHHHHH
Confidence            88776532211 11123344444433        4889999999999999999999999999999999999999999999


Q ss_pred             HhhhhCC-CCccCccccCCChhHHHHHHHhhccCC-CCccccccCCCeeecCeeeCCCCEEEeehhhcccCCCCCCCCCC
Q 039713          338 IDSVVGK-SRLVEESDIVDLPYLQAIVKEVLRLHP-TPMAVRESTESFTINGYEIPAKTRVFINVWAICRDPKYWENPFE  415 (511)
Q Consensus       338 i~~~~~~-~~~~~~~~~~~lp~l~a~i~E~lRl~p-~~~~~R~~~~~~~l~g~~Ipkg~~v~~~~~~~~~d~~~~~dp~~  415 (511)
                      +.++... +..++.+++.++|||.||||||+|||| +|+..|...+|.+++||.|||||.|.++.+.+.+||++|++|++
T Consensus       357 i~~~~p~~~~~~~~~~l~~~pyLrAcIKEtlRlyPv~~~~~R~l~~D~vL~gY~vPagT~V~l~~~~~~r~~~~F~~p~~  436 (519)
T KOG0159|consen  357 ILAVLPSGNSELTQKALTNMPYLRACIKETLRLYPVVPGNGRVLPKDLVLSGYHVPAGTLVVLFLYVLGRNPAYFPDPEE  436 (519)
T ss_pred             HHhhCCCcccccchHHHhhCHHHHHHHHhhhceeccccccccccchhceeccceecCCCeEEEeehhhccChhhCCCccc
Confidence            9999987 578999999999999999999999999 99999999999999999999999999999999999999999999


Q ss_pred             CCCCcccCCCCCCCCCcCCCcceeeccCCCCCCCCChHHHHHHHHHHHHHHhhhcEeeecCCCCCCCcccccccccccCC
Q 039713          416 FCPERFIGEDGKSQLDVRGQHYHYIPFGSGRRVCPGTTLALLMVQTTLAAMIQCFDWKVNGGDGTVDMEEAVGITLPRAH  495 (511)
Q Consensus       416 F~P~R~~~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~  495 (511)
                      |+||||++++.     ...++..++|||.|+|+|+|+++|.+||.++|++|+++|+++...+ .++++  ....++.|..
T Consensus       437 F~PeRWL~~~~-----~~~~pF~~LPFGfG~R~C~GRRiAElEl~llLarllr~f~V~~~~~-~pv~~--~~~~il~P~~  508 (519)
T KOG0159|consen  437 FLPERWLKPST-----KTIHPFASLPFGFGPRMCLGRRIAELELHLLLARLLRNFKVEFLHE-EPVEY--VYRFILVPNR  508 (519)
T ss_pred             cChhhhccccc-----CCCCCceecCCCCCccccchHHHHHHHHHHHHHHHHHhcceeecCC-CCccc--eeEEEEcCCC
Confidence            99999999742     2347889999999999999999999999999999999999996542 34444  4567788899


Q ss_pred             ceeEeeeecCC
Q 039713          496 SLVCVPITMLD  506 (511)
Q Consensus       496 ~~~~~~~~r~~  506 (511)
                      ++.+++++|.+
T Consensus       509 ~l~f~f~~r~~  519 (519)
T KOG0159|consen  509 PLRFKFRPRNE  519 (519)
T ss_pred             CcceeeeeCCC
Confidence            99999999864


No 16 
>PLN03018 homomethionine N-hydroxylase
Probab=100.00  E-value=1.5e-73  Score=560.59  Aligned_cols=469  Identities=26%  Similarity=0.452  Sum_probs=351.5

Q ss_pred             CCCCCCCCCCCccccccccC-CCcc-HHHHHHHHhh-CCeEEEecCCccEEEecCHHHHHHHHHhccccccCCCcccchh
Q 039713           32 SYFPPSPMALPIIGHLHLLA-PIPH-QALHKLSIRY-GPLIHFRLGSVPCVAVCSADVAKDFFKTHETSILNRPFLINVD  108 (511)
Q Consensus        32 ~~~ppgp~~~P~~G~~~~~~-~~~~-~~~~~~~~ky-G~v~~~~~g~~~~v~v~dp~~~~~i~~~~~~~~~~~~~~~~~~  108 (511)
                      .+.||||.++|++|+++.+. .++. .++.++.++| |+||++++|++++|+|+||+.+++++.+++..|+.++......
T Consensus        39 ~~~PPgp~~~P~iGnl~~l~~~~~~~~~~~~~~~~~~g~i~~~~lg~~~~vvvsdpe~ikevl~~~~~~f~~rp~~~~~~  118 (534)
T PLN03018         39 RQLPPGPPGWPILGNLPELIMTRPRSKYFHLAMKELKTDIACFNFAGTHTITINSDEIAREAFRERDADLADRPQLSIME  118 (534)
T ss_pred             CCCCcCCCCCCeeccHHHhccCCCcchhHHHHHHHhCCCeEEEEeCCccEEEECCHHHHHHHHHhCcHhhcCCCCchhhh
Confidence            34799999999999998873 2332 4566777776 7999999999999999999999999998877888887654443


Q ss_pred             hhccCCcceeeccCchhhhhhhhhHHHhc-CchHHHhhhhhhHHHHHHHHHHHHHHHccCCCceehHHHHHHHHHHHHHH
Q 039713          109 YITYGSADFLFAPYGPYWKFMKKICMTQL-LGGQTLNQFLPIRFEEIRRFIRYVLKKAKASEEVDVGGQLIRLTNDVVTR  187 (511)
Q Consensus       109 ~~~~~~~~~~~~~~g~~w~~~R~~~~~~~-f~~~~l~~~~~~i~~~~~~ll~~l~~~~~~~~~vdl~~~~~~~~~~vi~~  187 (511)
                      .+..++.++++..+|+.|+.+|+.+. +. ++......+.+.+..+++++++.+.+.+..++++|+...+..+++|+++.
T Consensus       119 ~l~~~~~~i~~~~~G~~Wk~~Rk~l~-~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~t~~vi~~  197 (534)
T PLN03018        119 TIGDNYKSMGTSPYGEQFMKMKKVIT-TEIMSVKTLNMLEAARTIEADNLIAYIHSMYQRSETVDVRELSRVYGYAVTMR  197 (534)
T ss_pred             hhccCCCceEecCCCHHHHHHHHHHH-HHhcCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCceeHHHHHHHHHHHHHHH
Confidence            33333324555667999999999996 55 45555555656666678899999887555566799999999999999999


Q ss_pred             HhhccccCCCh------HH-HHHHHHHHHHHHhhhc---cCccccccc-hhhcccccchHHHHHHHHHHHHHHHHHHHHH
Q 039713          188 MTMNYRCSDNE------EE-ADEMRKVVSAATELTG---KFNLADYIW-FCKFLDLQGFGKRLKETLEKFDEMMERIIKE  256 (511)
Q Consensus       188 ~~fG~~~~~~~------~~-~~~~~~~~~~~~~~~~---~~~~~~~~p-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  256 (511)
                      ++||.+++..+      .. ...+......+.....   .....+.+| ++.+....+...+.......+.+++++++++
T Consensus       198 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  277 (534)
T PLN03018        198 MLFGRRHVTKENVFSDDGRLGKAEKHHLEVIFNTLNCLPGFSPVDYVERWLRGWNIDGQEERAKVNVNLVRSYNNPIIDE  277 (534)
T ss_pred             HHhCCccccccccccccccchhHHHHHHHHHHHHHHHhCCCcHHHHhhhhhhhhcccchHHHHHHHHHHHHHHHHHHHHH
Confidence            99999875321      11 1112212222222111   111112233 3322111223344555566778888888888


Q ss_pred             HHHHHHhhhhcCCCCCCCcHHHHHHhhcccccccccCCHHHHHHHHHHHhhhcCCChHHHHHHHHHHHhcCchHHHHHHH
Q 039713          257 HQEARKINEEAGNDYTPNDLLDILLDISEDESSEIKLSRENIKSFIADMFAAGSDTPAITIEWALAQLINHPDVMKKARE  336 (511)
Q Consensus       257 ~~~~~~~~~~~~~~~~~~dl~~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tta~~l~~~l~~L~~~P~~~~~l~~  336 (511)
                      +++...... .  .....|+++.|++...++. ...++++++.++++.+++||+|||+++++|++++|++||++|+|+++
T Consensus       278 ~~~~~~~~~-~--~~~~~d~l~~ll~~~~~~~-~~~ls~~~i~~~~~~~~~aG~dTta~~l~~~l~~L~~~P~~q~kl~~  353 (534)
T PLN03018        278 RVELWREKG-G--KAAVEDWLDTFITLKDQNG-KYLVTPDEIKAQCVEFCIAAIDNPANNMEWTLGEMLKNPEILRKALK  353 (534)
T ss_pred             HHHHhhhcc-C--CCCcccHHHHHHHhhcccC-CCCCCHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHH
Confidence            765432111 1  0124689999997643221 11489999999999999999999999999999999999999999999


Q ss_pred             HHhhhhCCCCccCccccCCChhHHHHHHHhhccCC-CCccc-cccCCCeeecCeeeCCCCEEEeehhhcccCCCCCCCCC
Q 039713          337 EIDSVVGKSRLVEESDIVDLPYLQAIVKEVLRLHP-TPMAV-RESTESFTINGYEIPAKTRVFINVWAICRDPKYWENPF  414 (511)
Q Consensus       337 Ei~~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~p-~~~~~-R~~~~~~~l~g~~Ipkg~~v~~~~~~~~~d~~~~~dp~  414 (511)
                      ||+++++.++.++.+++.+|||++|||+|+||++| ++... |.+.+|++++||.|||||.|+++.+++||||++|+||+
T Consensus       354 Ei~~v~~~~~~~~~~~~~~lpyl~a~i~EtlRl~p~~~~~~~r~~~~d~~i~G~~IpkGt~V~~~~~~~~~dp~~~~~p~  433 (534)
T PLN03018        354 ELDEVVGKDRLVQESDIPNLNYLKACCRETFRIHPSAHYVPPHVARQDTTLGGYFIPKGSHIHVCRPGLGRNPKIWKDPL  433 (534)
T ss_pred             HHHHHhCCCCCCCHHHhcCCHHHHHHHHHHHhcCCCccccCCcccCCCeeECCEEECCCCEEEEChHHhcCCcccCCCcc
Confidence            99999987778899999999999999999999999 88875 88999999999999999999999999999999999999


Q ss_pred             CCCCCcccCCCCCCC-CCcCCCcceeeccCCCCCCCCChHHHHHHHHHHHHHHhhhcEeeecCCCCCCCccccccccccc
Q 039713          415 EFCPERFIGEDGKSQ-LDVRGQHYHYIPFGSGRRVCPGTTLALLMVQTTLAAMIQCFDWKVNGGDGTVDMEEAVGITLPR  493 (511)
Q Consensus       415 ~F~P~R~~~~~~~~~-~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~  493 (511)
                      +|+||||+++++... ......+..++|||+|+|.|+|+++|++|+++++++|+++|+|+...+..++++....+.+. .
T Consensus       434 ~F~PeRfl~~~~~~~~~~~~~~~~~~lpFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~-~  512 (534)
T PLN03018        434 VYEPERHLQGDGITKEVTLVETEMRFVSFSTGRRGCVGVKVGTIMMVMMLARFLQGFNWKLHQDFGPLSLEEDDASLL-M  512 (534)
T ss_pred             ccCCccCCCCCCccccccccCCCCCccCCCCCCCCCccHHHHHHHHHHHHHHHHHhceEEeCCCCCCCCcccccccee-c
Confidence            999999997532111 00112346799999999999999999999999999999999999544322344433334444 4


Q ss_pred             CCceeEeeeecCC
Q 039713          494 AHSLVCVPITMLD  506 (511)
Q Consensus       494 ~~~~~~~~~~r~~  506 (511)
                      +.++.|.+++|..
T Consensus       513 p~~~~v~~~~R~~  525 (534)
T PLN03018        513 AKPLLLSVEPRLA  525 (534)
T ss_pred             CCCeEEEEEeccc
Confidence            5699999999953


No 17 
>KOG0157 consensus Cytochrome P450 CYP4/CYP19/CYP26 subfamilies [Secondary metabolites biosynthesis, transport and catabolism; Lipid transport and metabolism]
Probab=100.00  E-value=4.5e-75  Score=565.63  Aligned_cols=455  Identities=29%  Similarity=0.461  Sum_probs=358.1

Q ss_pred             CCCCCCCCCCCCccccccccC-C--CccHHHHHHHHhhCCeEEEecCCccEEEecCHHHHHHHHHhccccccCCCcccch
Q 039713           31 TSYFPPSPMALPIIGHLHLLA-P--IPHQALHKLSIRYGPLIHFRLGSVPCVAVCSADVAKDFFKTHETSILNRPFLINV  107 (511)
Q Consensus        31 ~~~~ppgp~~~P~~G~~~~~~-~--~~~~~~~~~~~kyG~v~~~~~g~~~~v~v~dp~~~~~i~~~~~~~~~~~~~~~~~  107 (511)
                      ....||||.++|++|++..+. .  +...++.++..+||++|+.|+|+.++|+++||+.+++|+.+....+.+.+.+...
T Consensus        33 ~~~~~~gp~~~P~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~dp~~~~~Il~~~~~~~~k~~~~~~~  112 (497)
T KOG0157|consen   33 KKKLPPGPPGWPLIGNLLEFLKPLEEILDFVTELLSRYGPIFKTWLGGKPTVVTTDPELIEEILKSSNENYPKGPDYPES  112 (497)
T ss_pred             HhccCCCCCCCCcccchHHhhcchhHHHHHHHHHHHHcCchhhhhhcCeeEEEEcCHHHHHHHHhcCcccCCCchhHHHH
Confidence            567899999999999998883 2  5677889999999999999999999999999999999997555455444444422


Q ss_pred             hhhccCCcceeeccCchhhhhhhhhHHHhcCchHHHhhhhhhHHHHHHHHHHHHHHHccCCCceehHHHHHHHHHHHHHH
Q 039713          108 DYITYGSADFLFAPYGPYWKFMKKICMTQLLGGQTLNQFLPIRFEEIRRFIRYVLKKAKASEEVDVGGQLIRLTNDVVTR  187 (511)
Q Consensus       108 ~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~i~~~~~~ll~~l~~~~~~~~~vdl~~~~~~~~~~vi~~  187 (511)
                      .....|. + ++..+|+.|+.+||.++ +.|+...++.+...+.+++..++..+.... .++.+|+.+.+.++++|+++.
T Consensus       113 ~~~~lG~-g-ll~~~g~~W~~~Rk~~~-~~f~~~~L~~~~~~~~~~~~~~~~~~~~~~-~~~~vd~~~~~~~~tld~i~~  188 (497)
T KOG0157|consen  113 LKPWLGD-G-LLFSDGEKWHKHRKLLT-PAFHFEILKSFVPVFIESSLILLLLLELAA-SGEEVDLQDLLKRLTLDIICK  188 (497)
T ss_pred             HHHHhcC-c-cccCCchHHHHHHhhcc-HhhhHHHHHHHHHHHHHHHHHHHHHHHHhh-cCCeEcHHHHHHHHHHHHHHH
Confidence            2222333 4 44445999999999985 999999999999998898888777776643 333399999999999999999


Q ss_pred             Hhhcccc-CCChHHHHHHHHHHHHHHhhhccCccccccc-hhhcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 039713          188 MTMNYRC-SDNEEEADEMRKVVSAATELTGKFNLADYIW-FCKFLDLQGFGKRLKETLEKFDEMMERIIKEHQEARKINE  265 (511)
Q Consensus       188 ~~fG~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  265 (511)
                      ++||... +.......++.+++..+...+...   ...| +..++...+..++..++.+.++++++++|++|++......
T Consensus       189 ~~~G~~~~~~~~~~~~~~~~a~~~~~~~~~~~---~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~iI~~rr~~~~~~~  265 (497)
T KOG0157|consen  189 TAMGPESLDAEGPELFEYVQAFDDLTELISKR---INLPLGTKFLYGLKSERKLKKARKILHDFLEKIIRERREELEKEG  265 (497)
T ss_pred             HhcCCccccccCCcccHHHHHHHHHHHHHHHH---HcCchhhhHHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence            9999222 222223345555555444433221   1123 3333322336788889999999999999999987765422


Q ss_pred             hcCCCCCCCcHHHHHHhhcccccccccCCHHHHHHHHHHHhhhcCCChHHHHHHHHHHHhcCchHHHHHHHHHhhhhCCC
Q 039713          266 EAGNDYTPNDLLDILLDISEDESSEIKLSRENIKSFIADMFAAGSDTPAITIEWALAQLINHPDVMKKAREEIDSVVGKS  345 (511)
Q Consensus       266 ~~~~~~~~~dl~~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tta~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~  345 (511)
                      ... .....|+++.+.... +    ..++++++.+++..|++||+||||++++|++++|+.||++|+|+++|++++++..
T Consensus       266 ~~~-~~~~~d~L~~~~~~~-~----~~l~~~~i~d~v~tf~faG~DTTss~ltw~l~~La~hP~vq~k~~eEi~~i~~~~  339 (497)
T KOG0157|consen  266 SGE-EKKRLDFLDTLLLEE-D----KPLTDEDIRDEVDTFMFAGHDTTSSALTWTLWLLAKHPEVQEKLREEVDEILGNR  339 (497)
T ss_pred             Ccc-cchhhhHHHHHHHhc-c----CCCCHHHHHHHHHHheeeccchHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhCCC
Confidence            110 113567777533221 1    4699999999999999999999999999999999999999999999999999853


Q ss_pred             Cc-cCccccCCChhHHHHHHHhhccCC-CCccccccCCCeee-cCeeeCCCCEEEeehhhcccCCCCCC-CCCCCCCCcc
Q 039713          346 RL-VEESDIVDLPYLQAIVKEVLRLHP-TPMAVRESTESFTI-NGYEIPAKTRVFINVWAICRDPKYWE-NPFEFCPERF  421 (511)
Q Consensus       346 ~~-~~~~~~~~lp~l~a~i~E~lRl~p-~~~~~R~~~~~~~l-~g~~Ipkg~~v~~~~~~~~~d~~~~~-dp~~F~P~R~  421 (511)
                      .. .+.....+|+||++||+|||||+| +|...|.+.+|+++ +||.||||+.|+++.+++|||+.+|+ ||++||||||
T Consensus       340 ~~~~~~~~~~~m~yl~~vi~EsLRLyppvp~~~R~~~~d~~l~~g~~IPkG~~V~i~~~~~~r~~~~~~~dp~~F~PeRf  419 (497)
T KOG0157|consen  340 DDKWEVEKLDQMKYLEMVIKESLRLYPPVPLVARKATKDVKLPGGYTIPKGTNVLISIYALHRDPRVWGEDPEEFDPERF  419 (497)
T ss_pred             CCCCChhhhhhhHHHHHHHHHHhccCCCCchhhcccCCCeEcCCCcEeCCCCEEEEehHHhccCccccCCChhhcCcccc
Confidence            22 222223369999999999999999 99999999999999 58999999999999999999999995 9999999999


Q ss_pred             cCCCCCCCCCcCCCcceeeccCCCCCCCCChHHHHHHHHHHHHHHhhhcEeeecCCCCCCCcccccccccccCCceeEee
Q 039713          422 IGEDGKSQLDVRGQHYHYIPFGSGRRVCPGTTLALLMVQTTLAAMIQCFDWKVNGGDGTVDMEEAVGITLPRAHSLVCVP  501 (511)
Q Consensus       422 ~~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  501 (511)
                      ++++...    ..++++|+|||+|+|.|+|++||++||+++++.|+++|+|++..+..   ....+.+++++..++.|.+
T Consensus       420 ~~~~~~~----~~~~~~fipFsaGpR~CiG~~fA~lemKv~l~~ll~~f~~~~~~~~~---~~~~~~~~l~~~~gl~v~~  492 (497)
T KOG0157|consen  420 LDGEEKA----KRHPFAFIPFSAGPRNCIGQKFAMLEMKVVLAHLLRRFRIEPVGGDK---PKPVPELTLRPKNGLKVKL  492 (497)
T ss_pred             CCCCCcC----CCCCccccCCCCCcccchhHHHHHHHHHHHHHHHHHheEEEecCCCC---ceeeeEEEEEecCCeEEEE
Confidence            9753211    23578999999999999999999999999999999999999665332   3445788999999999999


Q ss_pred             eecC
Q 039713          502 ITML  505 (511)
Q Consensus       502 ~~r~  505 (511)
                      ++|.
T Consensus       493 ~~r~  496 (497)
T KOG0157|consen  493 RPRG  496 (497)
T ss_pred             EeCC
Confidence            9986


No 18 
>PLN02500 cytochrome P450 90B1
Probab=100.00  E-value=4.1e-74  Score=565.13  Aligned_cols=461  Identities=18%  Similarity=0.250  Sum_probs=342.4

Q ss_pred             HHHHHHHHHHHHHHHHHh-hcCCCCCCCCCCCCCCcccccccc-C----CCccHHHHHHHHhhCCeEEEecCCccEEEec
Q 039713            9 ILSLIWLVSLILARSILR-RSKRTSYFPPSPMALPIIGHLHLL-A----PIPHQALHKLSIRYGPLIHFRLGSVPCVAVC   82 (511)
Q Consensus         9 ~~~~~~~~~~~~~~~~~~-~~~~~~~~ppgp~~~P~~G~~~~~-~----~~~~~~~~~~~~kyG~v~~~~~g~~~~v~v~   82 (511)
                      ++++.+++.+++.+++.+ ...++.+.||||+++|++||++.+ .    ..++.++.+++++||+||++++|++++|+|+
T Consensus        13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~PPgp~~~PiiGn~~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~g~~~~vvv~   92 (490)
T PLN02500         13 FLLPSILSLLLVFILTKRRPKQKRFNLPPGNMGWPFLGETIGYLKPYSATSIGEFMEQHISRYGKIYRSNLFGEPTIVSA   92 (490)
T ss_pred             HHHHHHHHHHHHHHhCccccccCCCCCCCCCcCCCchhhHHHHHhhcccCChHHHHHHHHHHhcccccccccCCCeEEec
Confidence            333333333333334443 234455789999999999997654 1    3567788999999999999999999999999


Q ss_pred             CHHHHHHHHHhccccccCCCcccchhhhccCCcceeeccCchhhhhhhhhHHHhcCchHHHhh-hhhhHHHHHHHHHHHH
Q 039713           83 SADVAKDFFKTHETSILNRPFLINVDYITYGSADFLFAPYGPYWKFMKKICMTQLLGGQTLNQ-FLPIRFEEIRRFIRYV  161 (511)
Q Consensus        83 dp~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~-~~~~i~~~~~~ll~~l  161 (511)
                      ||+++++++.+++..|+.+........  .|. ..++..+|+.|+.+|+.+. +.|+..+++. +.+.+.+.+..+++.+
T Consensus        93 ~p~~~~~vl~~~~~~f~~~~~~~~~~~--~g~-~~~~~~~g~~wr~~Rk~~~-~~f~~~~l~~~~~~~~~~~~~~~~~~~  168 (490)
T PLN02500         93 DAGLNRFILQNEGRLFECSYPRSIGGI--LGK-WSMLVLVGDMHRDMRSISL-NFLSHARLRTHLLKEVERHTLLVLDSW  168 (490)
T ss_pred             CHHHHHHHHhCCCCeEEeeCchHHHHH--hCc-ccccccCCHHHHHHHHHHH-HhcChHHHHHHHHHHHHHHHHHHHHHh
Confidence            999999999987666653321111111  122 2355568999999999985 8999998886 4566666666666554


Q ss_pred             HHHccCCCceehHHHHHHHHHHHHHHHhhccccCCChHHHHHHHHHHHHHHhhhccCccccccchhhcccccchHHHHHH
Q 039713          162 LKKAKASEEVDVGGQLIRLTNDVVTRMTMNYRCSDNEEEADEMRKVVSAATELTGKFNLADYIWFCKFLDLQGFGKRLKE  241 (511)
Q Consensus       162 ~~~~~~~~~vdl~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~  241 (511)
                          ..++.+|+.+.+..++++++++++||.+.+..  ....+...+..+......  ....+|.       ...++..+
T Consensus       169 ----~~~~~vd~~~~~~~~~~~vi~~~~fg~~~~~~--~~~~~~~~~~~~~~~~~~--~~~~~p~-------~~~~~~~~  233 (490)
T PLN02500        169 ----KENSTFSAQDEAKKFTFNLMAKHIMSMDPGEE--ETEQLKKEYVTFMKGVVS--APLNFPG-------TAYRKALK  233 (490)
T ss_pred             ----CCCCCEEehHHHHHHHHHHHHHHHhCCCCCch--HHHHHHHHHHHHHhhhhc--chhcCCC-------cccHHHHH
Confidence                23557999999999999999999999876432  222333333332222110  0001121       11244556


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCCCcHHHHHHhhcccccccccCCHHHHHHHHHHHhhhcCCChHHHHHHHH
Q 039713          242 TLEKFDEMMERIIKEHQEARKINEEAGNDYTPNDLLDILLDISEDESSEIKLSRENIKSFIADMFAAGSDTPAITIEWAL  321 (511)
Q Consensus       242 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~dl~~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tta~~l~~~l  321 (511)
                      ..+.+.+++.+.++++++..+....   .....|+++.+++.       ..++++++.+++..+++||+|||+++++|++
T Consensus       234 ~~~~~~~~~~~~i~~~~~~~~~~~~---~~~~~d~l~~ll~~-------~~ls~~~i~~~~~~ll~AG~dTta~tl~~~l  303 (490)
T PLN02500        234 SRATILKFIERKMEERIEKLKEEDE---SVEEDDLLGWVLKH-------SNLSTEQILDLILSLLFAGHETSSVAIALAI  303 (490)
T ss_pred             HHHHHHHHHHHHHHHHHHhhhcccC---CCCcchHHHHHHhc-------cCCCHHHHHHHHHHHHHhhhhHHHHHHHHHH
Confidence            6778888888888887654332111   01246899999874       1489999999999999999999999999999


Q ss_pred             HHHhcCchHHHHHHHHHhhhhC-----CCCccCccccCCChhHHHHHHHhhccCC-CCccccccCCCeeecCeeeCCCCE
Q 039713          322 AQLINHPDVMKKAREEIDSVVG-----KSRLVEESDIVDLPYLQAIVKEVLRLHP-TPMAVRESTESFTINGYEIPAKTR  395 (511)
Q Consensus       322 ~~L~~~P~~~~~l~~Ei~~~~~-----~~~~~~~~~~~~lp~l~a~i~E~lRl~p-~~~~~R~~~~~~~l~g~~Ipkg~~  395 (511)
                      ++|++||++|+|+++|++++++     ++..++++|+.++||++|||+|+||++| +|...|.+++|++++||.|||||.
T Consensus       304 ~~L~~~Pevq~kl~~Ei~~v~~~~~~~~~~~~~~~d~~~lpyl~avikEtlRl~P~~~~~~R~~~~d~~~~G~~IPkGt~  383 (490)
T PLN02500        304 FFLQGCPKAVQELREEHLEIARAKKQSGESELNWEDYKKMEFTQCVINETLRLGNVVRFLHRKALKDVRYKGYDIPSGWK  383 (490)
T ss_pred             HHHhhCHHHHHHHHHHHHHHhhccccCCCCCCCHHHhccCHHHHHHHHHHHhcCCCccCeeeEeCCCceeCCEEECCCCE
Confidence            9999999999999999999874     2346899999999999999999999999 888779999999999999999999


Q ss_pred             EEeehhhcccCCCCCCCCCCCCCCcccCCCCCCCCC--cCCCcceeeccCCCCCCCCChHHHHHHHHHHHHHHhhhcEee
Q 039713          396 VFINVWAICRDPKYWENPFEFCPERFIGEDGKSQLD--VRGQHYHYIPFGSGRRVCPGTTLALLMVQTTLAAMIQCFDWK  473 (511)
Q Consensus       396 v~~~~~~~~~d~~~~~dp~~F~P~R~~~~~~~~~~~--~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~~~~ll~~~~~~  473 (511)
                      |+++.|++||||++|+||++||||||+++++..+..  ....+..++|||+|+|.|+|+++|++|+++++++|+++|+|+
T Consensus       384 V~~~~~~~hrdp~~~~dP~~F~PeRfl~~~~~~~~~~~~~~~~~~~lpFG~G~R~CiG~~~A~~el~~~la~ll~~f~~~  463 (490)
T PLN02500        384 VLPVIAAVHLDSSLYDQPQLFNPWRWQQNNNRGGSSGSSSATTNNFMPFGGGPRLCAGSELAKLEMAVFIHHLVLNFNWE  463 (490)
T ss_pred             EEechhhcccCcccCCCccccChhhccCCCcccccccccCCCCCCCcCCCCCCCCCCcHHHHHHHHHHHHHHHHhccEEE
Confidence            999999999999999999999999999753211100  011356799999999999999999999999999999999999


Q ss_pred             ecCCCCCCCcccccccccccCCceeEeeee
Q 039713          474 VNGGDGTVDMEEAVGITLPRAHSLVCVPIT  503 (511)
Q Consensus       474 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  503 (511)
                      ..++...  .. . ..+ .++.++.|++++
T Consensus       464 ~~~~~~~--~~-~-~~~-~~~~~l~~~~~~  488 (490)
T PLN02500        464 LAEADQA--FA-F-PFV-DFPKGLPIRVRR  488 (490)
T ss_pred             EcCCCcc--ee-c-ccc-cCCCCceEEEEe
Confidence            6543221  11 1 122 334688888774


No 19 
>PLN03195 fatty acid omega-hydroxylase; Provisional
Probab=100.00  E-value=9.5e-73  Score=559.10  Aligned_cols=482  Identities=18%  Similarity=0.292  Sum_probs=352.2

Q ss_pred             hHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCccccccccCCCccHHHHHHHHhh---CCeEEEecCCccEEEec
Q 039713            6 GCIILSLIWLVSLILARSILRRSKRTSYFPPSPMALPIIGHLHLLAPIPHQALHKLSIRY---GPLIHFRLGSVPCVAVC   82 (511)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ppgp~~~P~~G~~~~~~~~~~~~~~~~~~ky---G~v~~~~~g~~~~v~v~   82 (511)
                      ++++.++.+++++++..++..|.++   -+|||+++|++|+++.+..+ +..+.+|.++|   |++|++++|+.++++++
T Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~pgp~~~p~~G~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~v~i~   81 (516)
T PLN03195          6 SGMSGVLFIALAVLSWIFIHRWSQR---NRKGPKSWPIIGAALEQLKN-YDRMHDWLVEYLSKDRTVVVKMPFTTYTYIA   81 (516)
T ss_pred             ccchHHHHHHHHHHHHHHHHHhhcc---ccCCCCCCCeecchHHHHhc-cchHHHHHHHHhccCCcEEEeeCCCCceEec
Confidence            4444444444444444444444333   27899999999998765333 44567888888   89999999999999999


Q ss_pred             CHHHHHHHHHhccccccCCCcccchhhhccCCcceeeccCchhhhhhhhhHHHhcCchHHHhhhhhhH-HHHHHHHHHHH
Q 039713           83 SADVAKDFFKTHETSILNRPFLINVDYITYGSADFLFAPYGPYWKFMKKICMTQLLGGQTLNQFLPIR-FEEIRRFIRYV  161 (511)
Q Consensus        83 dp~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~i-~~~~~~ll~~l  161 (511)
                      ||+++++|+.++...+...+..........|  +.+++.+|+.|+.+||.+. +.|+..+++.+.+.+ .+.++.+.+.+
T Consensus        82 ~p~~~~~il~~~~~~~~~~~~~~~~~~~~~g--~~l~~~~g~~w~~~Rr~l~-~~fs~~~l~~~~~~~~~~~~~~l~~~l  158 (516)
T PLN03195         82 DPVNVEHVLKTNFANYPKGEVYHSYMEVLLG--DGIFNVDGELWRKQRKTAS-FEFASKNLRDFSTVVFREYSLKLSSIL  158 (516)
T ss_pred             CHHHHHHHHhhCccccCCcHhHHHHHHHHhc--CeeeccCcHHHHHHHHhcc-hhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999998764455443322111111123  2366788999999999985 899999999998876 55677777777


Q ss_pred             HHHccCCCceehHHHHHHHHHHHHHHHhhccccCCChH--HHHHHHHHHHHHHhhhccCccccccchhhcccccchHHHH
Q 039713          162 LKKAKASEEVDVGGQLIRLTNDVVTRMTMNYRCSDNEE--EADEMRKVVSAATELTGKFNLADYIWFCKFLDLQGFGKRL  239 (511)
Q Consensus       162 ~~~~~~~~~vdl~~~~~~~~~~vi~~~~fG~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~  239 (511)
                      .+....++++|+.+++..+++|+++.++||.+++..++  ....+.+.++........ .....++.+.........+..
T Consensus       159 ~~~~~~~~~vd~~~~~~~~~~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~p~~~~~~~~~~~~~~~~  237 (516)
T PLN03195        159 SQASFANQVVDMQDLFMRMTLDSICKVGFGVEIGTLSPSLPENPFAQAFDTANIIVTL-RFIDPLWKLKKFLNIGSEALL  237 (516)
T ss_pred             HHHHhcCCeEcHHHHHHHHHHHHHHHHHhCCCccccccCCCccHHHHHHHHHHHHHHH-HHhcchhhHHHhcccchHHHH
Confidence            65444567899999999999999999999998875321  112333333332221100 000011111111111223344


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCCCcHHHHHHhhcccccccccCCHHHHHHHHHHHhhhcCCChHHHHHH
Q 039713          240 KETLEKFDEMMERIIKEHQEARKINEEAGNDYTPNDLLDILLDISEDESSEIKLSRENIKSFIADMFAAGSDTPAITIEW  319 (511)
Q Consensus       240 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~dl~~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tta~~l~~  319 (511)
                      .+..+.+.+++.+.++++++........ ......|+++.|++...++  +..++++++.++++.+++||+|||+++++|
T Consensus       238 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~-~~~~~~d~l~~ll~~~~~~--~~~l~~~~i~~~~~~ll~AG~dTTa~tl~~  314 (516)
T PLN03195        238 SKSIKVVDDFTYSVIRRRKAEMDEARKS-GKKVKHDILSRFIELGEDP--DSNFTDKSLRDIVLNFVIAGRDTTATTLSW  314 (516)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhccccc-cccccccHHHHHHhccCCC--CCCCCHHHHHHHHHHHHHHhhHhHHHHHHH
Confidence            5667778888888888776543221000 0012568999999753321  335999999999999999999999999999


Q ss_pred             HHHHHhcCchHHHHHHHHHhhhhCC--------------------CCccCccccCCChhHHHHHHHhhccCC-CCccccc
Q 039713          320 ALAQLINHPDVMKKAREEIDSVVGK--------------------SRLVEESDIVDLPYLQAIVKEVLRLHP-TPMAVRE  378 (511)
Q Consensus       320 ~l~~L~~~P~~~~~l~~Ei~~~~~~--------------------~~~~~~~~~~~lp~l~a~i~E~lRl~p-~~~~~R~  378 (511)
                      ++++|++||++|+|+++|++++++.                    ++.++++++.+||||+|||+||||++| +|...|.
T Consensus       315 ~l~~L~~~P~vq~kl~~Ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Lpyl~Avi~EtLRl~p~~p~~~r~  394 (516)
T PLN03195        315 FVYMIMMNPHVAEKLYSELKALEKERAKEEDPEDSQSFNQRVTQFAGLLTYDSLGKLQYLHAVITETLRLYPAVPQDPKG  394 (516)
T ss_pred             HHHHHhcCHHHHHHHHHHHHHhhhcccccccccccchhhhhcccccCCCCHHHHhcCHHHHHHHHHHhhcCCCCcchhhh
Confidence            9999999999999999999998742                    245788999999999999999999999 8888888


Q ss_pred             cCCCeee-cCeeeCCCCEEEeehhhcccCCCCC-CCCCCCCCCcccCCCCCCCCCcCCCcceeeccCCCCCCCCChHHHH
Q 039713          379 STESFTI-NGYEIPAKTRVFINVWAICRDPKYW-ENPFEFCPERFIGEDGKSQLDVRGQHYHYIPFGSGRRVCPGTTLAL  456 (511)
Q Consensus       379 ~~~~~~l-~g~~Ipkg~~v~~~~~~~~~d~~~~-~dp~~F~P~R~~~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~  456 (511)
                      +.+|.++ +||.|||||.|.++.+++||||++| +||++|+||||++++...    ...+..++|||+|+|.|+|++||+
T Consensus       395 ~~~d~~~~~G~~IpkGt~V~~~~~~~h~dp~~~g~dP~~F~PeRwl~~~~~~----~~~~~~~~pFG~G~R~CiG~~lA~  470 (516)
T PLN03195        395 ILEDDVLPDGTKVKAGGMVTYVPYSMGRMEYNWGPDAASFKPERWIKDGVFQ----NASPFKFTAFQAGPRICLGKDSAY  470 (516)
T ss_pred             hccCcCcCCCcEECCCCEEEEehHhhccChhhhccChhhcCCcccCCCCCcC----CCCCceEeccCCCCCcCcCHHHHH
Confidence            8787776 9999999999999999999999999 999999999999642111    124457999999999999999999


Q ss_pred             HHHHHHHHHHhhhcEeeecCCCCCCCcccccccccccCCceeEeeeecC
Q 039713          457 LMVQTTLAAMIQCFDWKVNGGDGTVDMEEAVGITLPRAHSLVCVPITML  505 (511)
Q Consensus       457 ~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~  505 (511)
                      +|++++++.|+++|+++..++ .+..  .....+..+..+++|++++|.
T Consensus       471 ~e~~~~la~ll~~f~~~~~~~-~~~~--~~~~~~~~~~~~~~v~~~~r~  516 (516)
T PLN03195        471 LQMKMALALLCRFFKFQLVPG-HPVK--YRMMTILSMANGLKVTVSRRS  516 (516)
T ss_pred             HHHHHHHHHHHHhceeEecCC-Ccce--eeeeeEEecCCCEEEEEEeCC
Confidence            999999999999999995432 2222  223455677889999999873


No 20 
>PLN02774 brassinosteroid-6-oxidase
Probab=100.00  E-value=1.2e-72  Score=550.16  Aligned_cols=437  Identities=19%  Similarity=0.298  Sum_probs=337.1

Q ss_pred             HHHHhhcCCCCCCCCCCCCCCccccccccCCCccHHHHHHHHhhCCeEEEecCCccEEEecCHHHHHHHHHhccccccCC
Q 039713           22 RSILRRSKRTSYFPPSPMALPIIGHLHLLAPIPHQALHKLSIRYGPLIHFRLGSVPCVAVCSADVAKDFFKTHETSILNR  101 (511)
Q Consensus        22 ~~~~~~~~~~~~~ppgp~~~P~~G~~~~~~~~~~~~~~~~~~kyG~v~~~~~g~~~~v~v~dp~~~~~i~~~~~~~~~~~  101 (511)
                      ++..+++ .+++.||||+++|++||++.+..++..++++++++||++|++++|++++++++||+++++++.++...+..+
T Consensus        21 ~~~~~~~-~r~~~ppgp~~~P~~G~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~~   99 (463)
T PLN02774         21 RWNEVRY-SKKGLPPGTMGWPLFGETTEFLKQGPDFMKNQRLRYGSFFKSHILGCPTIVSMDPELNRYILMNEGKGLVPG   99 (463)
T ss_pred             HHHhhcc-CCCCCCCCCCCCCchhhHHHHHHhhHHHHHHHHHHhccCccceecCCCeEEEeCHHHHHHHHcCCCCeEEec
Confidence            3333443 344689999999999999887667788999999999999999999999999999999999998766555332


Q ss_pred             CcccchhhhccCCcceeeccCchhhhhhhhhHHHhcCchHHHhh-hhhhHHHHHHHHHHHHHHHccCCCceehHHHHHHH
Q 039713          102 PFLINVDYITYGSADFLFAPYGPYWKFMKKICMTQLLGGQTLNQ-FLPIRFEEIRRFIRYVLKKAKASEEVDVGGQLIRL  180 (511)
Q Consensus       102 ~~~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~-~~~~i~~~~~~ll~~l~~~~~~~~~vdl~~~~~~~  180 (511)
                      ........  .|. +.++..+|+.|+.+|+.+. ++|++..++. +.+.+.+.++++++.+.    .++++|+.+.+..+
T Consensus       100 ~~~~~~~~--lg~-~~~~~~~g~~w~~~R~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~v~~~~~~~~~  171 (463)
T PLN02774        100 YPQSMLDI--LGT-CNIAAVHGSTHRYMRGSLL-SLISPTMIRDHLLPKIDEFMRSHLSGWD----GLKTIDIQEKTKEM  171 (463)
T ss_pred             CCHHHHHH--hCc-cchhhcCCHHHHHHHHHHH-HhcCHHHHHHHHHHHHHHHHHHHHHhhC----CCCCEEeeHHHHHH
Confidence            21111111  222 2355678999999999985 8999999876 67887777777776553    34679999999999


Q ss_pred             HHHHHHHHhhccccCCChHHHHHHHHHHHHHHhhhccCccccccchhhcccccchHHHHHHHHHHHHHHHHHHHHHHHHH
Q 039713          181 TNDVVTRMTMNYRCSDNEEEADEMRKVVSAATELTGKFNLADYIWFCKFLDLQGFGKRLKETLEKFDEMMERIIKEHQEA  260 (511)
Q Consensus       181 ~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~  260 (511)
                      ++++++.++||.+.+.   ....+...+..+..  ...    .+|.  +++. ...++..++.+.+.+++.+.++++++.
T Consensus       172 ~~~~~~~~~~g~~~~~---~~~~~~~~~~~~~~--~~~----~~~~--~lp~-~~~~~~~~~~~~~~~~~~~~i~~r~~~  239 (463)
T PLN02774        172 ALLSALKQIAGTLSKP---ISEEFKTEFFKLVL--GTL----SLPI--DLPG-TNYRSGVQARKNIVRMLRQLIQERRAS  239 (463)
T ss_pred             HHHHHHHHHcCCCChH---HHHHHHHHHHHHhc--ccc----cCCc--CCCC-hhhhHHHHHHHHHHHHHHHHHHHHHhc
Confidence            9999999999976432   12222222222111  111    1111  1111 123455567778888888888776532


Q ss_pred             HHhhhhcCCCCCCCcHHHHHHhhcccccccccCCHHHHHHHHHHHhhhcCCChHHHHHHHHHHHhcCchHHHHHHHHHhh
Q 039713          261 RKINEEAGNDYTPNDLLDILLDISEDESSEIKLSRENIKSFIADMFAAGSDTPAITIEWALAQLINHPDVMKKAREEIDS  340 (511)
Q Consensus       261 ~~~~~~~~~~~~~~dl~~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tta~~l~~~l~~L~~~P~~~~~l~~Ei~~  340 (511)
                      .     .    ...|+++.++....   .+..++++++.+++..+++||+|||+++++|++++|++||++|+|+++|+++
T Consensus       240 ~-----~----~~~d~l~~ll~~~~---~~~~~s~~ei~~~~~~ll~Ag~dTt~~~l~w~l~~L~~~P~~q~kl~~Ei~~  307 (463)
T PLN02774        240 G-----E----THTDMLGYLMRKEG---NRYKLTDEEIIDQIITILYSGYETVSTTSMMAVKYLHDHPKALQELRKEHLA  307 (463)
T ss_pred             C-----C----CcccHHHHHHhCcc---CCCCCCHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHcCHHHHHHHHHHHHH
Confidence            1     1    25799999987422   1235899999999999999999999999999999999999999999999999


Q ss_pred             hhCC---CCccCccccCCChhHHHHHHHhhccCC-CCccccccCCCeeecCeeeCCCCEEEeehhhcccCCCCCCCCCCC
Q 039713          341 VVGK---SRLVEESDIVDLPYLQAIVKEVLRLHP-TPMAVRESTESFTINGYEIPAKTRVFINVWAICRDPKYWENPFEF  416 (511)
Q Consensus       341 ~~~~---~~~~~~~~~~~lp~l~a~i~E~lRl~p-~~~~~R~~~~~~~l~g~~Ipkg~~v~~~~~~~~~d~~~~~dp~~F  416 (511)
                      +++.   +..++++++.++||++|||+|+||++| ++...|.+++|++++||.||||+.|+++.+++||||++|+||++|
T Consensus       308 ~~~~~~~~~~~~~~~l~~lpyl~a~ikE~lRl~P~v~~~~R~~~~d~~l~g~~IpkGt~v~~~~~~~~rdp~~~~dP~~F  387 (463)
T PLN02774        308 IRERKRPEDPIDWNDYKSMRFTRAVIFETSRLATIVNGVLRKTTQDMELNGYVIPKGWRIYVYTREINYDPFLYPDPMTF  387 (463)
T ss_pred             HHhccCCCCCCCHHHHhcCcHHHHHHHHHHhcCCCCCCcccccCCCeeECCEEECCCCEEEEehHHhcCCcccCCChhcc
Confidence            9863   356889999999999999999999999 887779999999999999999999999999999999999999999


Q ss_pred             CCCcccCCCCCCCCCcCCCcceeeccCCCCCCCCChHHHHHHHHHHHHHHhhhcEeeecCCCCCCCcccccccccccCCc
Q 039713          417 CPERFIGEDGKSQLDVRGQHYHYIPFGSGRRVCPGTTLALLMVQTTLAAMIQCFDWKVNGGDGTVDMEEAVGITLPRAHS  496 (511)
Q Consensus       417 ~P~R~~~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  496 (511)
                      +||||++++.       .....++|||+|+|.|+|+++|++|++++++.|+++|+|++.++.. +.  ...  +..|+++
T Consensus       388 ~PeRfl~~~~-------~~~~~~lpFG~G~r~C~G~~~A~~e~~~~la~Ll~~f~~~~~~~~~-~~--~~~--~~~p~~g  455 (463)
T PLN02774        388 NPWRWLDKSL-------ESHNYFFLFGGGTRLCPGKELGIVEISTFLHYFVTRYRWEEVGGDK-LM--KFP--RVEAPNG  455 (463)
T ss_pred             CchhcCCCCc-------CCCccccCcCCCCCcCCcHHHHHHHHHHHHHHHHHhceEEECCCCc-cc--cCC--CCCCCCC
Confidence            9999996521       1123699999999999999999999999999999999999654322 11  111  2335678


Q ss_pred             eeEeeee
Q 039713          497 LVCVPIT  503 (511)
Q Consensus       497 ~~~~~~~  503 (511)
                      +.|++++
T Consensus       456 ~~~~~~~  462 (463)
T PLN02774        456 LHIRVSP  462 (463)
T ss_pred             ceEEeee
Confidence            8888874


No 21 
>PF00067 p450:  Cytochrome P450 p450 superfamily signature b-class p450 signature mitochondrial p450 signature E-class p450 group I signature E-class p450 group II signature E-class p450 group IV signature;  InterPro: IPR001128 Cytochrome P450 enzymes are a superfamily of haem-containing mono-oxygenases that are found in all kingdoms of life, and which show extraordinary diversity in their reaction chemistry. In mammals, these proteins are found primarily in microsomes of hepatocytes and other cell types, where they oxidise steroids, fatty acids and xenobiotics, and are important for the detoxification and clearance of various compounds, as well as for hormone synthesis and breakdown, cholesterol synthesis and vitamin D metabolism. In plants, these proteins are important for the biosynthesis of several compounds such as hormones, defensive compounds and fatty acids. In bacteria, they are important for several metabolic processes, such as the biosynthesis of antibiotic erythromycin in Saccharopolyspora erythraea (Streptomyces erythraeus). Cytochrome P450 enzymes use haem to oxidise their substrates, using protons derived from NADH or NADPH to split the oxygen so a single atom can be added to a substrate. They also require electrons, which they receive from a variety of redox partners. In certain cases, cytochrome P450 can be fused to its redox partner to produce a bi-functional protein, such as with P450BM-3 from Bacillus megaterium [], which has haem and flavin domains. Organisms produce many different cytochrome P450 enzymes (at least 58 in humans), which together with alternative splicing can provide a wide array of enzymes with different substrate and tissue specificities. Individual cytochrome P450 proteins follow the nomenclature: CYP, followed by a number (family), then a letter (subfamily), and another number (protein); e.g. CYP3A4 is the fourth protein in family 3, subfamily A. In general, family members should share >40% identity, while subfamily members should share >55% identity. Cytochrome P450 proteins can also be grouped by two different schemes. One scheme was based on a taxonomic split: class I (prokaryotic/mitochondrial) and class II (eukaryotic microsomes). The other scheme was based on the number of components in the system: class B (3-components) and class E (2-components). These classes merge to a certain degree. Most prokaryotes and mitochondria (and fungal CYP55) have 3-component systems (class I/class B) - a FAD-containing flavoprotein (NAD(P)H-dependent reductase), an iron-sulphur protein and P450. Most eukaryotic microsomes have 2-component systems (class II/class E) - NADPH:P450 reductase (FAD and FMN-containing flavoprotein) and P450. There are exceptions to this scheme, such as 1-component systems that resemble class E enzymes [, , ]. The class E enzymes can be further subdivided into five sequence clusters, groups I-V, each of which may contain more than one cytochrome P450 family (eg, CYP1 and CYP2 are both found in group I). The divergence of the cytochrome P450 superfamily into B- and E-classes, and further divergence into stable clusters within the E-class, appears to be very ancient, occurring before the appearance of eukaryotes. More information about these proteins can be found at Protein of the Month: Cytochrome P450 [].; GO: 0005506 iron ion binding, 0009055 electron carrier activity, 0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 0020037 heme binding, 0055114 oxidation-reduction process; PDB: 2RFC_B 2RFB_A 3EJB_H 3EJE_H 3EJD_H 1N6B_A 1NR6_A 1DT6_A 3EL3_A 3DBG_B ....
Probab=100.00  E-value=1.3e-73  Score=564.70  Aligned_cols=453  Identities=32%  Similarity=0.541  Sum_probs=362.1

Q ss_pred             CCCCCCCCccccccccC--CCccHHHHHHHHhhCCeEEEecCCccEEEecCHHHHHHHHHhccccccCCCcccchhh--h
Q 039713           35 PPSPMALPIIGHLHLLA--PIPHQALHKLSIRYGPLIHFRLGSVPCVAVCSADVAKDFFKTHETSILNRPFLINVDY--I  110 (511)
Q Consensus        35 ppgp~~~P~~G~~~~~~--~~~~~~~~~~~~kyG~v~~~~~g~~~~v~v~dp~~~~~i~~~~~~~~~~~~~~~~~~~--~  110 (511)
                      ||||+++|++||++.+.  ++++.++.+++++||+||+++++++++++|+||+++++++..+...++.++.......  .
T Consensus         1 Ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~~~~~vvv~~pe~~~~il~~~~~~~~~~~~~~~~~~~~~   80 (463)
T PF00067_consen    1 PPGPPPLPILGNLLQFRRKGNPHEFFRELHKKYGPIFRIWPGGQPIVVVSDPELIKEILRSRSKYFSFRPRPPWFEIFRG   80 (463)
T ss_dssp             SSCSSSBTTTBTHHHHHTTHHHHHHHHHHHHHHTSEEEEEETTEEEEEEESHHHHHHHHTTTTTTEEEEHCHHHHHHHHH
T ss_pred             CcCCCCcCceeEHHHhcCCCcHHHHHHHHHHHhCCEEEEeEecccccccccchhhccccccccccccccccccccccccc
Confidence            89999999999999985  7889999999999999999999999999999999999999988666665533222221  1


Q ss_pred             ccCCcceeeccCchhhhhhhhhHHHhcCchH-HHhhhhhhHHHHHHHHHHHHHHHccCCCceehHHHHHHHHHHHHHHHh
Q 039713          111 TYGSADFLFAPYGPYWKFMKKICMTQLLGGQ-TLNQFLPIRFEEIRRFIRYVLKKAKASEEVDVGGQLIRLTNDVVTRMT  189 (511)
Q Consensus       111 ~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~-~l~~~~~~i~~~~~~ll~~l~~~~~~~~~vdl~~~~~~~~~~vi~~~~  189 (511)
                      ..++ ..++..+|+.|+.+|+.+. +.|+.. .+ .+.+.+.+.++.+++.+.+....++.+|+.+.+..+++|+++.++
T Consensus        81 ~~~~-~~l~~~~~~~~~~~R~~~~-~~~~~~~~~-~~~~~i~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~d~i~~~~  157 (463)
T PF00067_consen   81 PFGG-KGLFFSDGERWRRQRRLLA-PAFSSKKIL-KLEPLIDEEAEELIDQLRKKAGSSGPVDLFDWLRRFALDVIGRVL  157 (463)
T ss_dssp             HHTT-TSSTTSSHHHHHHHHHHHH-HHHSHHHHH-HHHHHHHHHHHHHHHHHHHTTTSESEEEHHHHHHHHHHHHHHHHH
T ss_pred             cccc-ccccccccccccccccccc-ccccccccc-ccccccccccccccccccccccccceeeeeccccccccccccccc
Confidence            1222 4467777899999999996 777777 66 899999999999999999976665689999999999999999999


Q ss_pred             hccccCCCh-HHHHHHHHHHHHHHhhhccC--ccccccchhhcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 039713          190 MNYRCSDNE-EEADEMRKVVSAATELTGKF--NLADYIWFCKFLDLQGFGKRLKETLEKFDEMMERIIKEHQEARKINEE  266 (511)
Q Consensus       190 fG~~~~~~~-~~~~~~~~~~~~~~~~~~~~--~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  266 (511)
                      ||.+++..+ .....+.+.+..+.......  .+...+|++.++ .....+...+..+.+.+++...++++++.....  
T Consensus       158 fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~--  234 (463)
T PF00067_consen  158 FGKDFGSLDDEDFEEFLEAFDELFELLSNFFWNLPFFFPWLKYL-PTPLFRRFKRARDRLRKYIKEIIEERREELDDG--  234 (463)
T ss_dssp             HSSHHHGTTHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHCTS-SHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHSS--
T ss_pred             ccceeeeccccccccccccccccccccccccccccccccccccc-ccccccccccccccccccccccccccccccccc--
Confidence            999987443 33456666666665544221  123344544443 223455666677888888988888888766542  


Q ss_pred             cCCCCCCCcHHHHHHhhcccccccccCCHHHHHHHHHHHhhhcCCChHHHHHHHHHHHhcCchHHHHHHHHHhhhhCCCC
Q 039713          267 AGNDYTPNDLLDILLDISEDESSEIKLSRENIKSFIADMFAAGSDTPAITIEWALAQLINHPDVMKKAREEIDSVVGKSR  346 (511)
Q Consensus       267 ~~~~~~~~dl~~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tta~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~  346 (511)
                         .....|+++.++....+.+.+..++++++.++++.+++||+|||+.+++|++++|++||++|+++++||+++++.++
T Consensus       235 ---~~~~~d~l~~ll~~~~~~~~~~~ls~~~i~~~~~~~~~ag~dtt~~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~  311 (463)
T PF00067_consen  235 ---DESRRDLLDSLLQASSDSDGPSGLSDEEIAAELLTLLFAGHDTTASTLSWTLYELAKNPEVQEKLREEIDSVLGDGR  311 (463)
T ss_dssp             ---SSSCSSHHHHHHHHHHTTTTTSSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHTTTSS
T ss_pred             ---ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence               11478999999988511111137999999999999999999999999999999999999999999999999997667


Q ss_pred             ccCccccCCChhHHHHHHHhhccCC-CC-ccccccCCCeeecCeeeCCCCEEEeehhhcccCCCCCCCCCCCCCCcccCC
Q 039713          347 LVEESDIVDLPYLQAIVKEVLRLHP-TP-MAVRESTESFTINGYEIPAKTRVFINVWAICRDPKYWENPFEFCPERFIGE  424 (511)
Q Consensus       347 ~~~~~~~~~lp~l~a~i~E~lRl~p-~~-~~~R~~~~~~~l~g~~Ipkg~~v~~~~~~~~~d~~~~~dp~~F~P~R~~~~  424 (511)
                      .++.+++.+||||+|||+||+|++| ++ ...|.+.+|++++||.|||||.|+++.+++|+||++|+||++|+|+||++.
T Consensus       312 ~~~~~~l~~l~yl~a~i~EtlRl~p~~~~~~~R~~~~d~~l~g~~ip~gt~v~~~~~~~~~d~~~~~dp~~F~P~R~~~~  391 (463)
T PF00067_consen  312 EITFEDLSKLPYLDAVIKETLRLYPPVPFSLPRVATEDVTLGGYFIPKGTIVIVSIYALHRDPEYFPDPDEFDPERFLDE  391 (463)
T ss_dssp             SHHHHHHGTGHHHHHHHHHHHHHSTSSSTEEEEEESSSEEETTEEEETTSEEEEEHHHHTTSTTTSSSTTS--TTGGBTT
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            8999999999999999999999999 88 455999999999999999999999999999999999999999999999987


Q ss_pred             CCCCCCCcCCCcceeeccCCCCCCCCChHHHHHHHHHHHHHHhhhcEeeecCCCCCCCcccccccccccCCceeEee
Q 039713          425 DGKSQLDVRGQHYHYIPFGSGRRVCPGTTLALLMVQTTLAAMIQCFDWKVNGGDGTVDMEEAVGITLPRAHSLVCVP  501 (511)
Q Consensus       425 ~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  501 (511)
                      +.    ........++|||.|+|.|+|+++|++|+++++++||++|||++.++... .........+.++.+++|.+
T Consensus       392 ~~----~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~la~ll~~f~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~  463 (463)
T PF00067_consen  392 RG----ISNRPSFAFLPFGAGPRMCPGRNLAMMEMKVFLAKLLRRFDFELVPGSEP-EPQEQQNGFLLPPKPLKVKF  463 (463)
T ss_dssp             TS----TBCSSSTTSSTTESSTTS-TTHHHHHHHHHHHHHHHHHHEEEEESTTSSG-GEEECSCSSSEEESSSEEEE
T ss_pred             cc----ccccccccccccccccccchHHHHHHHHHHHHHHHHHHhCEEEECCCCCC-CCccccCceEeeCCCcEEeC
Confidence            53    11235678999999999999999999999999999999999997543222 22222213344555677654


No 22 
>PLN02169 fatty acid (omega-1)-hydroxylase/midchain alkane hydroxylase
Probab=100.00  E-value=4.5e-72  Score=548.50  Aligned_cols=449  Identities=19%  Similarity=0.302  Sum_probs=338.3

Q ss_pred             CCCCCCCCCccccccccCCCccHHHHHHH----HhhCCeEE---EecCCccEEEecCHHHHHHHHHhccccccCCCcccc
Q 039713           34 FPPSPMALPIIGHLHLLAPIPHQALHKLS----IRYGPLIH---FRLGSVPCVAVCSADVAKDFFKTHETSILNRPFLIN  106 (511)
Q Consensus        34 ~ppgp~~~P~~G~~~~~~~~~~~~~~~~~----~kyG~v~~---~~~g~~~~v~v~dp~~~~~i~~~~~~~~~~~~~~~~  106 (511)
                      -.|||.++|++|++..+..+... +.++.    .+||..++   +++|+.++++|+||+.+++|+.++...|.+++....
T Consensus        32 ~~p~p~~~pl~G~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~g~~~~vvv~dpe~i~~il~~~~~~~~k~~~~~~  110 (500)
T PLN02169         32 GQPILKNWPFLGMLPGMLHQIPR-IYDWTVEVLEASNLTFYFKGPWLSGTDMLFTADPKNIHHILSSNFGNYPKGPEFKK  110 (500)
T ss_pred             CCCCCCCCCcccchHHHHHccCc-HHHHHHHHHHhCCCcEEEEeeccCCCCeEEEcCHHHHHHHHhhCcccCCCcHHHHH
Confidence            36789999999999776333333 44444    44886665   678999999999999999999887666665543222


Q ss_pred             hhhhccCCcceeeccCchhhhhhhhhHHHhcCchHHHhhh--hhhHHHHHHHHHHHHHHHccCCCceehHHHHHHHHHHH
Q 039713          107 VDYITYGSADFLFAPYGPYWKFMKKICMTQLLGGQTLNQF--LPIRFEEIRRFIRYVLKKAKASEEVDVGGQLIRLTNDV  184 (511)
Q Consensus       107 ~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~--~~~i~~~~~~ll~~l~~~~~~~~~vdl~~~~~~~~~~v  184 (511)
                      .... .|  ..++..+|+.|+.+||.+. |.|+...+..+  .+.+.+.++.+++.+.+...+++.+|+.+.+.++++|+
T Consensus       111 ~~~~-~g--~gl~~~~g~~Wr~~Rk~l~-p~F~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~t~dv  186 (500)
T PLN02169        111 IFDV-LG--EGILTVDFELWEDLRKSNH-ALFHNQDFIELSLSSNKSKLKEGLVPFLDNAAHENIIIDLQDVFMRFMFDT  186 (500)
T ss_pred             HHHh-hc--CcccccCcHHHHHHHHHHH-HHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEeHHHHHHHHHHHH
Confidence            1111 23  3467778999999999995 99999887642  35666777888888876555677899999999999999


Q ss_pred             HHHHhhccccCCCh--HHHHHHHHHHHHHHhhhccCccccccchhh----cccccchHHHHHHHHHHHHHHHHHHHHHHH
Q 039713          185 VTRMTMNYRCSDNE--EEADEMRKVVSAATELTGKFNLADYIWFCK----FLDLQGFGKRLKETLEKFDEMMERIIKEHQ  258 (511)
Q Consensus       185 i~~~~fG~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~----~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~  258 (511)
                      ++.++||.+.+..+  .....+.+..+........   ....|++.    .....+..++..+..+.+.+++.+++++++
T Consensus       187 i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~r~  263 (500)
T PLN02169        187 SSILMTGYDPMSLSIEMLEVEFGEAADIGEEAIYY---RHFKPVILWRLQNWIGIGLERKMRTALATVNRMFAKIISSRR  263 (500)
T ss_pred             HHhheeCCCccccCCCCCCCHHHHHHHHHHHHHHh---HHhccHHHHHHHHHhCCchhhHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999875432  1112344443333222111   11123211    111223456677888899999999998876


Q ss_pred             HHHHhhhhcCCCCCCCcHHHHHHhhcccc-cccccCCHHHHHHHHHHHhhhcCCChHHHHHHHHHHHhcCchHHHHHHHH
Q 039713          259 EARKINEEAGNDYTPNDLLDILLDISEDE-SSEIKLSRENIKSFIADMFAAGSDTPAITIEWALAQLINHPDVMKKAREE  337 (511)
Q Consensus       259 ~~~~~~~~~~~~~~~~dl~~~ll~~~~~~-~~~~~l~~~~i~~~~~~~~~ag~~tta~~l~~~l~~L~~~P~~~~~l~~E  337 (511)
                      +......+.  .....|+++.+++...++ ..+..++++++.+++..+++||+|||+++++|++++|++||++|+|+++|
T Consensus       264 ~~~~~~~~~--~~~~~d~l~~ll~~~~~~~~~~~~~~~~~i~~~~~~~l~AG~dTTa~tl~w~l~~La~~Pevq~kl~~E  341 (500)
T PLN02169        264 KEEISRAET--EPYSKDALTYYMNVDTSKYKLLKPKKDKFIRDVIFSLVLAGRDTTSSALTWFFWLLSKHPQVMAKIRHE  341 (500)
T ss_pred             HHhhccccc--cCCCcCHHHHHHhccccccccccCCChHHHHHHHHHHHHhchhHHHHHHHHHHHHHHCCHHHHHHHHHH
Confidence            542211001  012468999999763221 11224788999999999999999999999999999999999999999999


Q ss_pred             HhhhhCCCCccCccccCCChhHHHHHHHhhccCC-CCccccccCCCeee-cCeeeCCCCEEEeehhhcccCCCCC-CCCC
Q 039713          338 IDSVVGKSRLVEESDIVDLPYLQAIVKEVLRLHP-TPMAVRESTESFTI-NGYEIPAKTRVFINVWAICRDPKYW-ENPF  414 (511)
Q Consensus       338 i~~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~p-~~~~~R~~~~~~~l-~g~~Ipkg~~v~~~~~~~~~d~~~~-~dp~  414 (511)
                      |++++      +.+++.+||||+|||+||||++| +|...|.+.+|.++ +||.|||||.|.++.|++||||++| +||+
T Consensus       342 i~~v~------~~~dl~~L~Yl~avi~EtLRl~P~vp~~~r~~~~d~~~~~G~~IpkGt~v~i~~~~ihrd~~~w~~dP~  415 (500)
T PLN02169        342 INTKF------DNEDLEKLVYLHAALSESMRLYPPLPFNHKAPAKPDVLPSGHKVDAESKIVICIYALGRMRSVWGEDAL  415 (500)
T ss_pred             HHhhC------CHHHHhcCHHHHHHHHHHHhcCCCCCcCceecCCCCCccCCEEECCCCEEEEcHHHhhCCccccCCChh
Confidence            98874      57889999999999999999999 99999888777665 9999999999999999999999999 8999


Q ss_pred             CCCCCcccCCCCCCCCCcCCCcceeeccCCCCCCCCChHHHHHHHHHHHHHHhhhcEeeecCCCCCCCcccccccccccC
Q 039713          415 EFCPERFIGEDGKSQLDVRGQHYHYIPFGSGRRVCPGTTLALLMVQTTLAAMIQCFDWKVNGGDGTVDMEEAVGITLPRA  494 (511)
Q Consensus       415 ~F~P~R~~~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~  494 (511)
                      +||||||+++++...   ...+++|+|||+|+|.|+|++||++|+++++++||++|+|+..++ .++  ....++++.+.
T Consensus       416 ~F~PeRfl~~~~~~~---~~~~~~~lPFG~GpR~CiG~~~A~~e~k~~la~ll~~f~~~~~~~-~~~--~~~~~~~l~~~  489 (500)
T PLN02169        416 DFKPERWISDNGGLR---HEPSYKFMAFNSGPRTCLGKHLALLQMKIVALEIIKNYDFKVIEG-HKI--EAIPSILLRMK  489 (500)
T ss_pred             hcCccccCCCCCCcc---CCCCccccCCCCCCCCCcCHHHHHHHHHHHHHHHHHHCEEEEcCC-CCc--ccccceEEecC
Confidence            999999997532111   123678999999999999999999999999999999999996532 222  33456778889


Q ss_pred             CceeEeeeec
Q 039713          495 HSLVCVPITM  504 (511)
Q Consensus       495 ~~~~~~~~~r  504 (511)
                      .++.|++++|
T Consensus       490 ~gl~l~l~~~  499 (500)
T PLN02169        490 HGLKVTVTKK  499 (500)
T ss_pred             CCEEEEEEeC
Confidence            9999999987


No 23 
>PLN02196 abscisic acid 8'-hydroxylase
Probab=100.00  E-value=3.1e-72  Score=546.74  Aligned_cols=426  Identities=19%  Similarity=0.315  Sum_probs=339.6

Q ss_pred             CCCCCCCCCCCCCCcccccccc-CCCccHHHHHHHHhhCCeEEEecCCccEEEecCHHHHHHHHHhccccccCCCcccch
Q 039713           29 KRTSYFPPSPMALPIIGHLHLL-APIPHQALHKLSIRYGPLIHFRLGSVPCVAVCSADVAKDFFKTHETSILNRPFLINV  107 (511)
Q Consensus        29 ~~~~~~ppgp~~~P~~G~~~~~-~~~~~~~~~~~~~kyG~v~~~~~g~~~~v~v~dp~~~~~i~~~~~~~~~~~~~~~~~  107 (511)
                      .++.+.||||+++|++|+++.+ ..+++.++.+++++||+||++++|++++|+++||+++++++.++.+.+  ++.....
T Consensus        31 ~~~~~~Ppgp~~~P~iG~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~v~v~~p~~~~~vl~~~~~~~--~~~~~~~  108 (463)
T PLN02196         31 STKLPLPPGTMGWPYVGETFQLYSQDPNVFFASKQKRYGSVFKTHVLGCPCVMISSPEAAKFVLVTKSHLF--KPTFPAS  108 (463)
T ss_pred             CCCCCCCCCCCCCCccchHHHHHhcCHHHHHHHHHHHhhhhheeeecCCceEEEcCHHHHHHHHhCCCCcc--cccCchH
Confidence            3445678999999999998775 678999999999999999999999999999999999999998776555  2332222


Q ss_pred             hhhccCCcceeeccCchhhhhhhhhHHHhcCchHHHhhhhhhHHHHHHHHHHHHHHHccCCCceehHHHHHHHHHHHHHH
Q 039713          108 DYITYGSADFLFAPYGPYWKFMKKICMTQLLGGQTLNQFLPIRFEEIRRFIRYVLKKAKASEEVDVGGQLIRLTNDVVTR  187 (511)
Q Consensus       108 ~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~i~~~~~~ll~~l~~~~~~~~~vdl~~~~~~~~~~vi~~  187 (511)
                      .....|. ..++..+|+.|+++|+.++ +.|++++++.+.+.+.+.+.++++.+.     ++.+|+.+++..+++++++.
T Consensus       109 ~~~~~g~-~~l~~~~g~~w~~~Rk~l~-~~f~~~~l~~~~~~i~~~~~~~~~~~~-----~~~v~~~~~~~~~~~~v~~~  181 (463)
T PLN02196        109 KERMLGK-QAIFFHQGDYHAKLRKLVL-RAFMPDAIRNMVPDIESIAQESLNSWE-----GTQINTYQEMKTYTFNVALL  181 (463)
T ss_pred             HHHHcCc-ccccccCcHHHHHHHHHHH-HhcChHHHHHHHHHHHHHHHHHHHcCC-----CCeEEeHHHHHHHHHHHHHH
Confidence            2222332 3466778999999999996 899999999999999999988887662     34799999999999999999


Q ss_pred             HhhccccCCChHHHHHHHHHHHHHHhhhccCccccccchhhcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhc
Q 039713          188 MTMNYRCSDNEEEADEMRKVVSAATELTGKFNLADYIWFCKFLDLQGFGKRLKETLEKFDEMMERIIKEHQEARKINEEA  267 (511)
Q Consensus       188 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~  267 (511)
                      ++||.+.....   ..+.+....+....      ..+|+.  ++ ....++..++.+.+.+++.+.++++++..     .
T Consensus       182 ~~fG~~~~~~~---~~~~~~~~~~~~~~------~~~~~~--~p-~~~~~~~~~a~~~~~~~~~~~i~~~~~~~-----~  244 (463)
T PLN02196        182 SIFGKDEVLYR---EDLKRCYYILEKGY------NSMPIN--LP-GTLFHKSMKARKELAQILAKILSKRRQNG-----S  244 (463)
T ss_pred             HHcCCCCchHH---HHHHHHHHHHhcch------hccccc--CC-CccchHHHHHHHHHHHHHHHHHHHHhhcC-----C
Confidence            99998753211   12222221111110      111211  11 11234556677788888888877665321     1


Q ss_pred             CCCCCCCcHHHHHHhhcccccccccCCHHHHHHHHHHHhhhcCCChHHHHHHHHHHHhcCchHHHHHHHHHhhhhCC---
Q 039713          268 GNDYTPNDLLDILLDISEDESSEIKLSRENIKSFIADMFAAGSDTPAITIEWALAQLINHPDVMKKAREEIDSVVGK---  344 (511)
Q Consensus       268 ~~~~~~~dl~~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tta~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~---  344 (511)
                          ...|+++.+++.      +.+++++++.++++.+++||+|||+++++|++++|++||++|+++++|++++++.   
T Consensus       245 ----~~~d~l~~ll~~------~~~l~~~ei~~~~~~~~~Ag~dTta~~l~~~l~~L~~~P~vq~kl~~Ei~~~~~~~~~  314 (463)
T PLN02196        245 ----SHNDLLGSFMGD------KEGLTDEQIADNIIGVIFAARDTTASVLTWILKYLAENPSVLEAVTEEQMAIRKDKEE  314 (463)
T ss_pred             ----CcccHHHHHHhc------CCCCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhccccc
Confidence                257899998853      1258999999999999999999999999999999999999999999999998864   


Q ss_pred             CCccCccccCCChhHHHHHHHhhccCC-CCccccccCCCeeecCeeeCCCCEEEeehhhcccCCCCCCCCCCCCCCcccC
Q 039713          345 SRLVEESDIVDLPYLQAIVKEVLRLHP-TPMAVRESTESFTINGYEIPAKTRVFINVWAICRDPKYWENPFEFCPERFIG  423 (511)
Q Consensus       345 ~~~~~~~~~~~lp~l~a~i~E~lRl~p-~~~~~R~~~~~~~l~g~~Ipkg~~v~~~~~~~~~d~~~~~dp~~F~P~R~~~  423 (511)
                      ++.++.+++.++||++|||+|+||++| ++...|.+.+|++++||.|||||.|+++.+++||||++|+||++|+||||++
T Consensus       315 ~~~~~~~~~~~l~yl~avi~EtlRl~p~~~~~~R~~~~d~~i~g~~IpkGt~v~~~~~~~~rd~~~~~dP~~F~PeRfl~  394 (463)
T PLN02196        315 GESLTWEDTKKMPLTSRVIQETLRVASILSFTFREAVEDVEYEGYLIPKGWKVLPLFRNIHHSADIFSDPGKFDPSRFEV  394 (463)
T ss_pred             CCCCCHHHHhcChHHHHHHHHHHhcCCCccccceeeccccccCCEEeCCCCEEEeeHHHhcCCchhcCCcCccChhhhcC
Confidence            356889999999999999999999999 8888899999999999999999999999999999999999999999999996


Q ss_pred             CCCCCCCCcCCCcceeeccCCCCCCCCChHHHHHHHHHHHHHHhhhcEeeecCCCCCCCcccccccccccCCceeEeeee
Q 039713          424 EDGKSQLDVRGQHYHYIPFGSGRRVCPGTTLALLMVQTTLAAMIQCFDWKVNGGDGTVDMEEAVGITLPRAHSLVCVPIT  503 (511)
Q Consensus       424 ~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  503 (511)
                      ..         .+..++|||+|+|.|+|+++|++|++++++.|+++|+|+..++.  .++.  +..+..|...+.|+++.
T Consensus       395 ~~---------~~~~~lpFG~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~--~~~~--~~~~~~p~~~~~~~~~~  461 (463)
T PLN02196        395 AP---------KPNTFMPFGNGTHSCPGNELAKLEISVLIHHLTTKYRWSIVGTS--NGIQ--YGPFALPQNGLPIALSR  461 (463)
T ss_pred             CC---------CCCcccCcCCCCCCCchHHHHHHHHHHHHHHHHHhcEEEEcCCC--CceE--EcccccCCCCceEEEec
Confidence            31         34579999999999999999999999999999999999965422  2232  33345577888888874


No 24 
>PLN02738 carotene beta-ring hydroxylase
Probab=100.00  E-value=9.7e-72  Score=553.26  Aligned_cols=447  Identities=22%  Similarity=0.385  Sum_probs=340.6

Q ss_pred             ccccccc-CCCccHHHHHHHHhhCCeEEEecCCccEEEecCHHHHHHHHHhccccccCCCcccchhhhccCCcceeeccC
Q 039713           44 IGHLHLL-APIPHQALHKLSIRYGPLIHFRLGSVPCVAVCSADVAKDFFKTHETSILNRPFLINVDYITYGSADFLFAPY  122 (511)
Q Consensus        44 ~G~~~~~-~~~~~~~~~~~~~kyG~v~~~~~g~~~~v~v~dp~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  122 (511)
                      +|++..+ ++..+..+.+|+++|||||++++|+.++++|+||+.+++||..+...|.+++...... +..+  ..++..+
T Consensus       142 ~G~l~~i~~g~~~~~l~~lh~kYGpI~ri~lGp~~~vvIsDpe~i~eIl~~~~~~f~k~~~~~~~~-~~~g--~~l~~~d  218 (633)
T PLN02738        142 KGSISAVRGEAFFIPLYELFLTYGGIFRLTFGPKSFLIVSDPSIAKHILRDNSKAYSKGILAEILE-FVMG--KGLIPAD  218 (633)
T ss_pred             cCcHHHhcCchHHHHHHHHHHHhCCEEEEEeCCCCEEEECCHHHHHHHHhhCcccCCCcchHHHHh-hccC--CceecCC
Confidence            3444445 5668889999999999999999999999999999999999987766666553321111 1122  2356778


Q ss_pred             chhhhhhhhhHHHhcCchHHHhhhhhhHHHHHHHHHHHHHHHccCCCceehHHHHHHHHHHHHHHHhhccccCCChH---
Q 039713          123 GPYWKFMKKICMTQLLGGQTLNQFLPIRFEEIRRFIRYVLKKAKASEEVDVGGQLIRLTNDVVTRMTMNYRCSDNEE---  199 (511)
Q Consensus       123 g~~w~~~R~~~~~~~f~~~~l~~~~~~i~~~~~~ll~~l~~~~~~~~~vdl~~~~~~~~~~vi~~~~fG~~~~~~~~---  199 (511)
                      |+.|+.+|+.+. +.|+...++.+.+.+.+.++++++.+.+...+++++|+...+..+++|+++.++||.+++...+   
T Consensus       219 ge~wr~rRr~l~-p~Fs~~~v~~l~~~i~~~v~~L~~~L~~~~~~g~~vdl~~~~~~lt~DVI~~~~FG~~~~~~~~~~~  297 (633)
T PLN02738        219 GEIWRVRRRAIV-PALHQKYVAAMISLFGQASDRLCQKLDAAASDGEDVEMESLFSRLTLDIIGKAVFNYDFDSLSNDTG  297 (633)
T ss_pred             cHHHHHHHHhcc-HhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEeHHHHHHHHHHHHHHHHHhCCCccccccchH
Confidence            999999999985 9999999999999999999999999987666788999999999999999999999998874321   


Q ss_pred             HHHHHHHHHHHHHhhhccCccccccchhhcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh----cCCCCCCCc
Q 039713          200 EADEMRKVVSAATELTGKFNLADYIWFCKFLDLQGFGKRLKETLEKFDEMMERIIKEHQEARKINEE----AGNDYTPND  275 (511)
Q Consensus       200 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~----~~~~~~~~d  275 (511)
                      ....+...+...............+|++..+  +...++..+..+.+.+++..+++.+++.......    ........|
T Consensus       298 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l--~~~~~~~~~~~~~l~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~d  375 (633)
T PLN02738        298 IVEAVYTVLREAEDRSVSPIPVWEIPIWKDI--SPRQRKVAEALKLINDTLDDLIAICKRMVEEEELQFHEEYMNERDPS  375 (633)
T ss_pred             HHHHHHHHHHHHHHHhhcchhhhhhhHHhhh--chHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhcccccccch
Confidence            1222222222221110000000111222211  1223444455566666666666654432211100    000112468


Q ss_pred             HHHHHHhhcccccccccCCHHHHHHHHHHHhhhcCCChHHHHHHHHHHHhcCchHHHHHHHHHhhhhCCCCccCccccCC
Q 039713          276 LLDILLDISEDESSEIKLSRENIKSFIADMFAAGSDTPAITIEWALAQLINHPDVMKKAREEIDSVVGKSRLVEESDIVD  355 (511)
Q Consensus       276 l~~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tta~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~~~~~  355 (511)
                      +++.|++..      ..++++++.++++.+++||+|||+++|+|++++|++||++|+|||+|++++++ ++.++++++++
T Consensus       376 il~~Ll~~~------~~ls~~~L~~e~~~ll~AG~eTTA~tLt~~l~~L~~~Pevq~kLreEl~~v~~-~~~~t~edL~k  448 (633)
T PLN02738        376 ILHFLLASG------DDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKEPSVVAKLQEEVDSVLG-DRFPTIEDMKK  448 (633)
T ss_pred             HHHHHHHcC------CCCCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHhCHHHHHHHHHHHHHhcC-CCCCCHHHHcc
Confidence            999998752      24899999999999999999999999999999999999999999999999998 46789999999


Q ss_pred             ChhHHHHHHHhhccCC-CCccccccCCCeeecCeeeCCCCEEEeehhhcccCCCCCCCCCCCCCCcccCCCCCCCCCcCC
Q 039713          356 LPYLQAIVKEVLRLHP-TPMAVRESTESFTINGYEIPAKTRVFINVWAICRDPKYWENPFEFCPERFIGEDGKSQLDVRG  434 (511)
Q Consensus       356 lp~l~a~i~E~lRl~p-~~~~~R~~~~~~~l~g~~Ipkg~~v~~~~~~~~~d~~~~~dp~~F~P~R~~~~~~~~~~~~~~  434 (511)
                      ||||+|||+|+|||+| ++...|.+.+|++++||.|||||.|+++.|.+||||++||||++|+||||+.++...  +...
T Consensus       449 LPYL~AVIkEtLRL~p~~p~~~R~a~~d~~i~gy~IPkGT~V~~s~~~ihrdp~ifpdP~~F~PERWl~~~~~~--~~~~  526 (633)
T PLN02738        449 LKYTTRVINESLRLYPQPPVLIRRSLENDMLGGYPIKRGEDIFISVWNLHRSPKHWDDAEKFNPERWPLDGPNP--NETN  526 (633)
T ss_pred             CHHHHHHHHHHHhcCCCccccceeeccCceECCEEECCCCEEEecHHHHhCCccccCCccccCcccCCCCCCCc--cccC
Confidence            9999999999999999 888889999999999999999999999999999999999999999999998532111  1112


Q ss_pred             CcceeeccCCCCCCCCChHHHHHHHHHHHHHHhhhcEeeecCCCCCCCcccccccccccCCceeEeeeecCCC
Q 039713          435 QHYHYIPFGSGRRVCPGTTLALLMVQTTLAAMIQCFDWKVNGGDGTVDMEEAVGITLPRAHSLVCVPITMLDP  507 (511)
Q Consensus       435 ~~~~~~~Fg~G~r~C~G~~~a~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~  507 (511)
                      ....++|||.|+|.|+|++||++|++++++.|+++|+|++.++..++.  ...+.++.+..++.|++++|+..
T Consensus       527 ~~~~~vpFG~G~R~CiG~~lA~~El~l~LA~Llr~F~~el~~~~~~~~--~~~~~~~~p~~~l~v~l~~R~~~  597 (633)
T PLN02738        527 QNFSYLPFGGGPRKCVGDMFASFENVVATAMLVRRFDFQLAPGAPPVK--MTTGATIHTTEGLKMTVTRRTKP  597 (633)
T ss_pred             CCCceeCCCCCCCCCcCHHHHHHHHHHHHHHHHHhCeeEeCCCCCCcc--cccceEEeeCCCcEEEEEECCCC
Confidence            456899999999999999999999999999999999999654322222  23456677788999999999754


No 25 
>PLN03141 3-epi-6-deoxocathasterone 23-monooxygenase; Provisional
Probab=100.00  E-value=1.3e-70  Score=534.65  Aligned_cols=438  Identities=20%  Similarity=0.288  Sum_probs=339.2

Q ss_pred             CCCCCCCCCCCCCCcccccccc-----CCCccHHHHHHHHhhCCeEEEecCCccEEEecCHHHHHHHHHhccccccCCCc
Q 039713           29 KRTSYFPPSPMALPIIGHLHLL-----APIPHQALHKLSIRYGPLIHFRLGSVPCVAVCSADVAKDFFKTHETSILNRPF  103 (511)
Q Consensus        29 ~~~~~~ppgp~~~P~~G~~~~~-----~~~~~~~~~~~~~kyG~v~~~~~g~~~~v~v~dp~~~~~i~~~~~~~~~~~~~  103 (511)
                      +++++.||||.++|++|+++.+     ..+++.++.+|+++||+||++++|++++|+++||+++++++.+++..+..+..
T Consensus         3 ~~~~~~Ppg~~~~P~iG~~~~l~~~~~~~~~~~~~~~~~~~yG~i~~~~lg~~~~vvv~~p~~~~~vl~~~~~~~~~~~~   82 (452)
T PLN03141          3 KKKSRLPKGSLGWPVIGETLDFISCAYSSRPESFMDKRRSLYGKVFKSHIFGTPTIVSTDAEVNKVVLQSDGNAFVPAYP   82 (452)
T ss_pred             CCCCCCCCCCCCCCchhhHHHHHhhcccCChHHHHHHHHHHhhheeeeccCCCCEEEEeCHHHhhHHHhCCCCeeeccCc
Confidence            4567789999999999999887     24688999999999999999999999999999999999999988766664422


Q ss_pred             ccchhhhccCCcceeeccCchhhhhhhhhHHHhcCchHHHhhh-hhhHHHHHHHHHHHHHHHccCCCceehHHHHHHHHH
Q 039713          104 LINVDYITYGSADFLFAPYGPYWKFMKKICMTQLLGGQTLNQF-LPIRFEEIRRFIRYVLKKAKASEEVDVGGQLIRLTN  182 (511)
Q Consensus       104 ~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~-~~~i~~~~~~ll~~l~~~~~~~~~vdl~~~~~~~~~  182 (511)
                      . ..... .|. +.++..+|+.|+++|+.+. +.|+...+..+ .+.+.+.++++++.+    ..++.+|+.+.+..+++
T Consensus        83 ~-~~~~l-~g~-~~~~~~~g~~wr~~r~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~  154 (452)
T PLN03141         83 K-SLTEL-MGK-SSILLINGSLQRRVHGLIG-AFLKSPHLKAQITRDMERYVSESLDSW----RDDPPVLVQDETKKIAF  154 (452)
T ss_pred             h-hHHHH-hCc-ccccccCcHHHHHHHHHHH-HhcCcHHHHHHHHHHHHHHHHHHHHhc----cCCCCEEhHHHHHHHHH
Confidence            1 12222 232 3466778999999999985 78887777653 344444444444433    34668999999999999


Q ss_pred             HHHHHHhhccccCCChHHHHHHHHHHHHHHhhhccCccccccchhhcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 039713          183 DVVTRMTMNYRCSDNEEEADEMRKVVSAATELTGKFNLADYIWFCKFLDLQGFGKRLKETLEKFDEMMERIIKEHQEARK  262 (511)
Q Consensus       183 ~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  262 (511)
                      ++++.++||.+.+.   ....+...+..+......      +|.  +++.. ...+..++.+.+.+++..+++++++...
T Consensus       155 ~vi~~~~~G~~~~~---~~~~~~~~~~~~~~~~~~------~~~--~~p~~-~~~~~~~~~~~l~~~~~~~i~~~~~~~~  222 (452)
T PLN03141        155 EVLVKALISLEPGE---EMEFLKKEFQEFIKGLMS------LPI--KLPGT-RLYRSLQAKKRMVKLVKKIIEEKRRAMK  222 (452)
T ss_pred             HHHHHHHcCCCchH---HHHHHHHHHHHHhhhHHh------Ccc--CCCch-HhHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            99999999976532   223333333332221111      121  11111 1234456778888999999988765532


Q ss_pred             hhhhcCCCCCCCcHHHHHHhhcccccccccCCHHHHHHHHHHHhhhcCCChHHHHHHHHHHHhcCchHHHHHHHHHhhhh
Q 039713          263 INEEAGNDYTPNDLLDILLDISEDESSEIKLSRENIKSFIADMFAAGSDTPAITIEWALAQLINHPDVMKKAREEIDSVV  342 (511)
Q Consensus       263 ~~~~~~~~~~~~dl~~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tta~~l~~~l~~L~~~P~~~~~l~~Ei~~~~  342 (511)
                      ...+. ......|+++.++++.     +..++++++..+++.+++||+|||+++++|++++|++||++|+++++|++++.
T Consensus       223 ~~~~~-~~~~~~d~l~~ll~~~-----~~~l~~~~i~~~~~~ll~Ag~dTts~tl~~~~~~L~~~P~v~~kl~~Ei~~~~  296 (452)
T PLN03141        223 NKEED-ETGIPKDVVDVLLRDG-----SDELTDDLISDNMIDMMIPGEDSVPVLMTLAVKFLSDCPVALQQLTEENMKLK  296 (452)
T ss_pred             ccCcc-ccCChhhHHHHHHhcC-----CCCCCHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhChHHHHHHHHHHHHHH
Confidence            21000 0012468999998753     23589999999999999999999999999999999999999999999999876


Q ss_pred             C----CCCccCccccCCChhHHHHHHHhhccCC-CCccccccCCCeeecCeeeCCCCEEEeehhhcccCCCCCCCCCCCC
Q 039713          343 G----KSRLVEESDIVDLPYLQAIVKEVLRLHP-TPMAVRESTESFTINGYEIPAKTRVFINVWAICRDPKYWENPFEFC  417 (511)
Q Consensus       343 ~----~~~~~~~~~~~~lp~l~a~i~E~lRl~p-~~~~~R~~~~~~~l~g~~Ipkg~~v~~~~~~~~~d~~~~~dp~~F~  417 (511)
                      +    .+..++.+++.++||++|||+|++|++| ++.+.|.+.+|++++||.||||+.|+++.+++|+||++|+||++|+
T Consensus       297 ~~~~~~~~~~~~~~~~~lpyl~avi~E~lRl~p~~~~~~R~~~~d~~l~g~~IPkG~~V~~~~~~~~~d~~~~~dP~~F~  376 (452)
T PLN03141        297 RLKADTGEPLYWTDYMSLPFTQNVITETLRMGNIINGVMRKAMKDVEIKGYLIPKGWCVLAYFRSVHLDEENYDNPYQFN  376 (452)
T ss_pred             hccCCCCCCCCHHHHhccHHHHHHHHHHHhccCCcCCcceeecCCeeECCEEECCCCEEEEehHhccCCchhcCCccccC
Confidence            3    2346788999999999999999999999 8777799999999999999999999999999999999999999999


Q ss_pred             CCcccCCCCCCCCCcCCCcceeeccCCCCCCCCChHHHHHHHHHHHHHHhhhcEeeecCCCCCCCcccccccccccCCce
Q 039713          418 PERFIGEDGKSQLDVRGQHYHYIPFGSGRRVCPGTTLALLMVQTTLAAMIQCFDWKVNGGDGTVDMEEAVGITLPRAHSL  497 (511)
Q Consensus       418 P~R~~~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  497 (511)
                      ||||++++        ..+..|+|||+|+|.|+|++||++|++++++.|+++|+|+..++ ..+     ...++.|..++
T Consensus       377 PeRfl~~~--------~~~~~~~pFG~G~R~C~G~~lA~~el~~~la~ll~~f~~~~~~~-~~~-----~~~~~~~~~~~  442 (452)
T PLN03141        377 PWRWQEKD--------MNNSSFTPFGGGQRLCPGLDLARLEASIFLHHLVTRFRWVAEED-TIV-----NFPTVRMKRKL  442 (452)
T ss_pred             cccccCCC--------CCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhcCeeecCCC-Cee-----ecccccCCCCc
Confidence            99999742        13457999999999999999999999999999999999985432 211     12467888999


Q ss_pred             eEeeeecCC
Q 039713          498 VCVPITMLD  506 (511)
Q Consensus       498 ~~~~~~r~~  506 (511)
                      .|.+++|.+
T Consensus       443 ~~~~~~~~~  451 (452)
T PLN03141        443 PIWVTRIDD  451 (452)
T ss_pred             eEEEEeCCC
Confidence            999999954


No 26 
>PLN02302 ent-kaurenoic acid oxidase
Probab=100.00  E-value=6.2e-70  Score=538.26  Aligned_cols=437  Identities=21%  Similarity=0.323  Sum_probs=341.0

Q ss_pred             CCCCCCCCCCCCcccccccc-----CCCccHHHHHHHHhhCC--eEEEecCCccEEEecCHHHHHHHHHhccccccCCCc
Q 039713           31 TSYFPPSPMALPIIGHLHLL-----APIPHQALHKLSIRYGP--LIHFRLGSVPCVAVCSADVAKDFFKTHETSILNRPF  103 (511)
Q Consensus        31 ~~~~ppgp~~~P~~G~~~~~-----~~~~~~~~~~~~~kyG~--v~~~~~g~~~~v~v~dp~~~~~i~~~~~~~~~~~~~  103 (511)
                      +.+.||||+++|++|+++.+     ..+++.++.+++++||+  ||++++++++.|+++||+++++++.++ +.|..+..
T Consensus        40 ~~~lpPgp~~~PilG~l~~~~~~~~~~~~~~~~~~~~~kyG~~~i~~~~~~~~~~vvv~~pe~~~~vl~~~-~~f~~~~~  118 (490)
T PLN02302         40 QPPLPPGDLGWPVIGNMWSFLRAFKSSNPDSFIASFISRYGRTGIYKAFMFGQPTVLVTTPEACKRVLTDD-DAFEPGWP  118 (490)
T ss_pred             CCCCcCCCCCCCccccHHHHHHhcccCCcHHHHHHHHHHhCCCcceeeecCCCCeEEEcCHHHHHHHHcCC-CccccCCc
Confidence            44689999999999998876     35788899999999997  799999999999999999999999865 44443321


Q ss_pred             ccchhhhccCCcceeeccCchhhhhhhhhHHHhcC-chHHHhhhhhhHHHHHHHHHHHHHHHccCCCceehHHHHHHHHH
Q 039713          104 LINVDYITYGSADFLFAPYGPYWKFMKKICMTQLL-GGQTLNQFLPIRFEEIRRFIRYVLKKAKASEEVDVGGQLIRLTN  182 (511)
Q Consensus       104 ~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f-~~~~l~~~~~~i~~~~~~ll~~l~~~~~~~~~vdl~~~~~~~~~  182 (511)
                      .....  ..|. ..+...+|+.|+++|+.+. +.| +.++++.+.+.+.+.++++++.+..    ++.+|+.+.+..+++
T Consensus       119 ~~~~~--~~g~-~~~~~~~g~~w~~~R~~~~-~~f~~~~~l~~~~~~i~~~v~~~~~~~~~----~~~v~~~~~~~~~~~  190 (490)
T PLN02302        119 ESTVE--LIGR-KSFVGITGEEHKRLRRLTA-APVNGPEALSTYIPYIEENVKSCLEKWSK----MGEIEFLTELRKLTF  190 (490)
T ss_pred             hhHHH--Hhcc-ccccccCcHHHHHHHHHHH-hccCCHHHHHHHHHHHHHHHHHHHHHhcC----CCCEehHHHHHHHHH
Confidence            11111  1232 3355578999999999996 777 5788999999999999988887743    346999999999999


Q ss_pred             HHHHHHhhccccCCChHHHHHHHHHHHHHHhhhccCccccccchhhcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 039713          183 DVVTRMTMNYRCSDNEEEADEMRKVVSAATELTGKFNLADYIWFCKFLDLQGFGKRLKETLEKFDEMMERIIKEHQEARK  262 (511)
Q Consensus       183 ~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  262 (511)
                      ++++.++||.+.+..   ...+.............  ....+|.       ...++..+..+.+.+++.+.++++++...
T Consensus       191 ~vi~~~~~G~~~~~~---~~~~~~~~~~~~~~~~~--~~~~~p~-------~~~~~~~~~~~~l~~~~~~~i~~~~~~~~  258 (490)
T PLN02302        191 KIIMYIFLSSESELV---MEALEREYTTLNYGVRA--MAINLPG-------FAYHRALKARKKLVALFQSIVDERRNSRK  258 (490)
T ss_pred             HHHHHHHcCCCChHH---HHHHHHHHHHHHHHhhh--CCcCCCc-------hhhHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence            999999999876432   12222222211111100  0001111       11234445667788888888887765432


Q ss_pred             hhhhcCCCCCCCcHHHHHHhhcccccccccCCHHHHHHHHHHHhhhcCCChHHHHHHHHHHHhcCchHHHHHHHHHhhhh
Q 039713          263 INEEAGNDYTPNDLLDILLDISEDESSEIKLSRENIKSFIADMFAAGSDTPAITIEWALAQLINHPDVMKKAREEIDSVV  342 (511)
Q Consensus       263 ~~~~~~~~~~~~dl~~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tta~~l~~~l~~L~~~P~~~~~l~~Ei~~~~  342 (511)
                      ...    .....|+++.|++...++  +..++++++.++++.+++||+|||+++++|++++|++||++|+|+++|+++++
T Consensus       259 ~~~----~~~~~d~l~~ll~~~~~~--~~~~~~~~i~~~~~~~~~Ag~dtta~~l~~~l~~L~~~P~~~~kl~~E~~~v~  332 (490)
T PLN02302        259 QNI----SPRKKDMLDLLLDAEDEN--GRKLDDEEIIDLLLMYLNAGHESSGHLTMWATIFLQEHPEVLQKAKAEQEEIA  332 (490)
T ss_pred             ccC----CCCcCCHHHHHHhhhccC--CCCCCHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence            210    113579999999864332  33589999999999999999999999999999999999999999999999998


Q ss_pred             CCC----CccCccccCCChhHHHHHHHhhccCC-CCccccccCCCeeecCeeeCCCCEEEeehhhcccCCCCCCCCCCCC
Q 039713          343 GKS----RLVEESDIVDLPYLQAIVKEVLRLHP-TPMAVRESTESFTINGYEIPAKTRVFINVWAICRDPKYWENPFEFC  417 (511)
Q Consensus       343 ~~~----~~~~~~~~~~lp~l~a~i~E~lRl~p-~~~~~R~~~~~~~l~g~~Ipkg~~v~~~~~~~~~d~~~~~dp~~F~  417 (511)
                      +..    ..++++++.++|||+|||+|++|++| ++...|.+.+|++++||.||||+.|+++.+++||||++|+||++|+
T Consensus       333 ~~~~~~~~~~~~~~l~~lpyl~a~i~E~lRl~p~~~~~~R~~~~d~~~~g~~Ip~Gt~v~~~~~~~~rd~~~~~dP~~F~  412 (490)
T PLN02302        333 KKRPPGQKGLTLKDVRKMEYLSQVIDETLRLINISLTVFREAKTDVEVNGYTIPKGWKVLAWFRQVHMDPEVYPNPKEFD  412 (490)
T ss_pred             hcCCCCCCCCCHHHHhcChHHHHHHHHHHHhCCCcccchhcccCCEeECCEEECCCCEEEeeHHHhcCCcccCCCccccC
Confidence            642    13788999999999999999999999 8888899999999999999999999999999999999999999999


Q ss_pred             CCcccCCCCCCCCCcCCCcceeeccCCCCCCCCChHHHHHHHHHHHHHHhhhcEeeecCCCCCCCcccccccccccCCce
Q 039713          418 PERFIGEDGKSQLDVRGQHYHYIPFGSGRRVCPGTTLALLMVQTTLAAMIQCFDWKVNGGDGTVDMEEAVGITLPRAHSL  497 (511)
Q Consensus       418 P~R~~~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  497 (511)
                      ||||++.+        ..+..++|||+|+|.|+|+++|.+|++++++.|+++|+|++.++..  +..  ......|..++
T Consensus       413 PeR~~~~~--------~~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~--~~~--~~~~~~p~~~~  480 (490)
T PLN02302        413 PSRWDNYT--------PKAGTFLPFGLGSRLCPGNDLAKLEISIFLHHFLLGYRLERLNPGC--KVM--YLPHPRPKDNC  480 (490)
T ss_pred             hhhcCCCC--------CCCCCccCCCCCCcCCCcHHHHHHHHHHHHHHHHhcCeeEEcCCCC--cce--eCCCCCCCCCc
Confidence            99999642        2345799999999999999999999999999999999999654322  222  22336777889


Q ss_pred             eEeeeecCC
Q 039713          498 VCVPITMLD  506 (511)
Q Consensus       498 ~~~~~~r~~  506 (511)
                      .+++++|..
T Consensus       481 ~~~~~~~~~  489 (490)
T PLN02302        481 LARITKVAS  489 (490)
T ss_pred             eEEEEeccC
Confidence            999998864


No 27 
>KOG0684 consensus Cytochrome P450 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=9.5e-71  Score=488.78  Aligned_cols=447  Identities=21%  Similarity=0.328  Sum_probs=350.9

Q ss_pred             CCCCCCC-CCCccccccccCCCccHHHHHHHHhhCCeEEEecCCccEEEecCHHHHHHHHHhccccccCCCcccchhhhc
Q 039713           33 YFPPSPM-ALPIIGHLHLLAPIPHQALHKLSIRYGPLIHFRLGSVPCVAVCSADVAKDFFKTHETSILNRPFLINVDYIT  111 (511)
Q Consensus        33 ~~ppgp~-~~P~~G~~~~~~~~~~~~~~~~~~kyG~v~~~~~g~~~~v~v~dp~~~~~i~~~~~~~~~~~~~~~~~~~~~  111 (511)
                      ..||--+ |+|++|++..++++|.++++++++|||+||++.++|+.+.++.+|+....++......++.+..........
T Consensus        31 ~~PPli~gwiP~lG~a~~fgk~P~eFl~~~~~K~GdVFTv~l~Gk~~Tfll~p~~~~~v~~~~~~~ld~~~~~~~l~~~v  110 (486)
T KOG0684|consen   31 KEPPLIKGWIPWLGSALAFGKDPLEFLRECRKKYGDVFTVLLMGKYMTFLLGPEGYDFVFKAKLADLDFEEAYSKLTTPV  110 (486)
T ss_pred             CCCcccccCcchhhHHHHhccCHHHHHHHHHHhcCCeEEEEEcCcEEEEEeCchhhHHHHcCcccccCHHHHHHHhhhhh
Confidence            5677765 579999999999999999999999999999999999999999999999999987644444333332333344


Q ss_pred             cCCcceeeccCchhhhhhhhhHHHhcCchHHHhhhhhhHHHHHHHHHHH-HHHHccCCCceehHHHHHHHHHHHHHHHhh
Q 039713          112 YGSADFLFAPYGPYWKFMKKICMTQLLGGQTLNQFLPIRFEEIRRFIRY-VLKKAKASEEVDVGGQLIRLTNDVVTRMTM  190 (511)
Q Consensus       112 ~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~i~~~~~~ll~~-l~~~~~~~~~vdl~~~~~~~~~~vi~~~~f  190 (511)
                      +|. +.+....+.....+.+.+ ...+...+++.+.+.|.+++++.+.. +.+   +++.-.+.+......+.+.-.++|
T Consensus       111 Fg~-~v~~d~~~~~~~e~~~~~-k~~L~~~~lk~~~e~m~~el~~~f~~~~~~---s~~~d~l~~~~~~ii~tAs~~ll~  185 (486)
T KOG0684|consen  111 FGK-GVVYDVPNHVMMEQKKFF-KSALGGVALKSLVELMLEELHAYFETSLGE---SGETDGLYTFCRLIIFTASRLLLG  185 (486)
T ss_pred             cCC-CccccCCCchHHHHHHHH-HHHhchhhHHHHHHHHHHHHHHHHhccccc---ccchhHhhhhhHHHhhhhHHHhhh
Confidence            553 456667777777887777 47889999999999999999888877 322   455566777777777777777777


Q ss_pred             ccccCCChHHHHHHHHHHHHHHhhhccCccccccchhhcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCC
Q 039713          191 NYRCSDNEEEADEMRKVVSAATELTGKFNLADYIWFCKFLDLQGFGKRLKETLEKFDEMMERIIKEHQEARKINEEAGND  270 (511)
Q Consensus       191 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~  270 (511)
                      |......+++...+...++.   ....  +...+|.  +++.+. .++..++++.+.+++.+.+.++++....       
T Consensus       186 ~e~r~~~d~~~a~l~~dLd~---~F~~--~d~~FP~--~LP~~~-~r~~~ra~~~i~k~f~~~i~~rr~s~s~-------  250 (486)
T KOG0684|consen  186 GEVRDQLDADVAKLYHDLDQ---GFQP--FDFLFPY--NLPIPL-LRRRDRARKKISKIFSKIILDRRASISK-------  250 (486)
T ss_pred             hhhhhhhcchHHHHHHHHhc---cccc--hHhhccc--CCCcch-hhhHHHHHHHHHHHHHHHHHHHHhcccc-------
Confidence            76555433232333332222   2111  1122342  222232 3444478888888999888888776433       


Q ss_pred             CCCCcHHHHHHhhcccccccccCCHHHHHHHHHHHhhhcCCChHHHHHHHHHHHhcCchHHHHHHHHHhhhhCCCCc-cC
Q 039713          271 YTPNDLLDILLDISEDESSEIKLSRENIKSFIADMFAAGSDTPAITIEWALAQLINHPDVMKKAREEIDSVVGKSRL-VE  349 (511)
Q Consensus       271 ~~~~dl~~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tta~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~-~~  349 (511)
                       ...|+++.+++...+   +.+.+++|+.+..+.+++||+.||+.+.+|++++|++|||+++.+++|+.+++|.... ++
T Consensus       251 -~~~dmlq~l~~~y~d---g~~~te~e~a~~li~~LwA~Q~ns~ptsfW~l~yLl~~Pe~~~a~~eE~k~vlG~~~~~l~  326 (486)
T KOG0684|consen  251 -WDNDMLQSLMEKYKD---GRPTTEEEIAGLLIGLLWAGQHNSSPTSFWTLAYLLRHPEAQKAVREEQKRVLGEKKEKLT  326 (486)
T ss_pred             -ccHHHHHHHHHHhhc---CCcCcHHHHHHHHHHHHHhccccccHHHHHHHHHHhhCHHHHHHHHHHHHHHhhccCCCCC
Confidence             477899998883222   4579999999999999999999999999999999999999999999999999987654 99


Q ss_pred             ccccCCChhHHHHHHHhhccCC-CCccccccCCCeeecC----eeeCCCCEEEeehhhcccCCCCCCCCCCCCCCcccCC
Q 039713          350 ESDIVDLPYLQAIVKEVLRLHP-TPMAVRESTESFTING----YEIPAKTRVFINVWAICRDPKYWENPFEFCPERFIGE  424 (511)
Q Consensus       350 ~~~~~~lp~l~a~i~E~lRl~p-~~~~~R~~~~~~~l~g----~~Ipkg~~v~~~~~~~~~d~~~~~dp~~F~P~R~~~~  424 (511)
                      .+.++++|+|++||+|||||+| .+...|.+.+|.++.+    |.||||..|.++++.+|+||++|+||++|+|+||+++
T Consensus       327 ~d~L~~lplL~~~IkEtLRL~~p~~~~~R~v~~D~tv~~~~~~Y~Ip~G~~valsP~~~hr~peif~dp~~Fk~dRf~~~  406 (486)
T KOG0684|consen  327 YDQLKDLPLLDSCIKETLRLHPPAHSLMRKVHEDLTVPGSDGEYVIPKGDIVALSPFLLHRDPEIFPDPEDFKPDRFLKD  406 (486)
T ss_pred             HHHHhcchHHHHHHHHHHhcCCchhhHHHhhccceeeccCCcceecCCCCEEEeccccccCCccccCChhhCChhhccCC
Confidence            9999999999999999999999 8888899999999965    9999999999999999999999999999999999988


Q ss_pred             CCCCCCCcCCCcceeeccCCCCCCCCChHHHHHHHHHHHHHHhhhcEeeecCCCCCCCcccccccccccCCceeEeeeec
Q 039713          425 DGKSQLDVRGQHYHYIPFGSGRRVCPGTTLALLMVQTTLAAMIQCFDWKVNGGDGTVDMEEAVGITLPRAHSLVCVPITM  504 (511)
Q Consensus       425 ~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r  504 (511)
                      +++.+..-..-.+.+||||+|.|.|||+.||.+|++.++..+|++||++..++ +.+..+. ...++.|.++++++.|.|
T Consensus       407 ~~~~~k~g~kl~yy~mpfGaGr~~CpGr~FA~~eIk~~~~l~L~~fdleLid~-~~P~~d~-s~~v~~P~g~v~irYK~R  484 (486)
T KOG0684|consen  407 NGESKKNGEKLDYYYMPFGAGRHRCPGRSFAYLEIKQFISLLLRHFDLELIDG-PFPEVDY-SRMVMQPEGDVRIRYKRR  484 (486)
T ss_pred             CcccccccccccccccccCCCcCCCCchHHHHHHHHHHHHHHHHHcceeecCC-CCCCCCH-HHhhcCCCCCceEEEeec
Confidence            76553222233456799999999999999999999999999999999994432 2223333 234778899999999988


Q ss_pred             C
Q 039713          505 L  505 (511)
Q Consensus       505 ~  505 (511)
                      .
T Consensus       485 ~  485 (486)
T KOG0684|consen  485 P  485 (486)
T ss_pred             C
Confidence            6


No 28 
>PLN02987 Cytochrome P450, family 90, subfamily A
Probab=100.00  E-value=1.4e-69  Score=525.77  Aligned_cols=448  Identities=21%  Similarity=0.307  Sum_probs=340.1

Q ss_pred             HHHHHHHHHHhhcCCCCCCCCCCCCCCccccccccC-----CCccHHHHHHHHhhCCeEEEecCCccEEEecCHHHHHHH
Q 039713           16 VSLILARSILRRSKRTSYFPPSPMALPIIGHLHLLA-----PIPHQALHKLSIRYGPLIHFRLGSVPCVAVCSADVAKDF   90 (511)
Q Consensus        16 ~~~~~~~~~~~~~~~~~~~ppgp~~~P~~G~~~~~~-----~~~~~~~~~~~~kyG~v~~~~~g~~~~v~v~dp~~~~~i   90 (511)
                      +++++.+++.+-...+.++||||.++|++|+++.+.     .+++.++.+++++||+||+++++++++|+|+||++++++
T Consensus        13 ~~~~~~~~~~~~~~~~~~lppgp~~~P~iG~~~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~l~~~~~vvv~~pe~~~~i   92 (472)
T PLN02987         13 LAAIFFLLLRRTRYRRMRLPPGSLGLPLVGETLQLISAYKTENPEPFIDERVARYGSLFMTHLFGEPTVFSADPETNRFI   92 (472)
T ss_pred             HHHHHHHHHHhhccCCCCCcCCCcCCCchhhHHHHHhhcccCChHHHHHHHHHHhchhhhhhhcCCCeEEEeCHHHHHHH
Confidence            344444444444444556899999999999998762     468889999999999999999999999999999999999


Q ss_pred             HHhccccccCCCcccchhhhccCCcceeeccCchhhhhhhhhHHHhcCchHHHhhhhhhHHHHHHHHHHHHHHHccCCCc
Q 039713           91 FKTHETSILNRPFLINVDYITYGSADFLFAPYGPYWKFMKKICMTQLLGGQTLNQFLPIRFEEIRRFIRYVLKKAKASEE  170 (511)
Q Consensus        91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~i~~~~~~ll~~l~~~~~~~~~  170 (511)
                      +.++...|..+........+  |+ ..++..+|+.|+++|+.+. +.++.+.++.+.   .+++.++++.....+  +++
T Consensus        93 l~~~~~~f~~~~~~~~~~~l--g~-~~l~~~~g~~wr~~R~~~~-~f~~~~~~~~~~---~~~~~~~~~~~~~~~--~~~  163 (472)
T PLN02987         93 LQNEGKLFECSYPGSISNLL--GK-HSLLLMKGNLHKKMHSLTM-SFANSSIIKDHL---LLDIDRLIRFNLDSW--SSR  163 (472)
T ss_pred             HhCCCceEEecCcHHHHHHh--Cc-ccccccCcHHHHHHHHHHH-HhcChHHHHHHH---HHHHHHHHHHHHHhh--ccc
Confidence            99877677554321122222  32 2355568999999999974 555555555433   122334433322222  246


Q ss_pred             eehHHHHHHHHHHHHHHHhhccccCCChHHHHHHHHHHHHHHhhhccCccccccchhhcccccchHHHHHHHHHHHHHHH
Q 039713          171 VDVGGQLIRLTNDVVTRMTMNYRCSDNEEEADEMRKVVSAATELTGKFNLADYIWFCKFLDLQGFGKRLKETLEKFDEMM  250 (511)
Q Consensus       171 vdl~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~  250 (511)
                      +++.+.+.+++++++++++||.+....   ...+...+.......    ....+|++     ....++..+..+++.+++
T Consensus       164 v~~~~~~~~~t~~vi~~~~fg~~~~~~---~~~~~~~~~~~~~~~----~~~~~p~l-----~~~~~~~~~~~~~~~~~~  231 (472)
T PLN02987        164 VLLMEEAKKITFELTVKQLMSFDPGEW---TESLRKEYVLVIEGF----FSVPLPLF-----STTYRRAIQARTKVAEAL  231 (472)
T ss_pred             eehHHHHHHHHHHHHHHHHcCCCChHH---HHHHHHHHHHHHhhh----hcCCCcCC-----CchHHHHHHHHHHHHHHH
Confidence            999999999999999999999765422   122222222221111    11122332     123466777888899999


Q ss_pred             HHHHHHHHHHHHhhhhcCCCCCCCcHHHHHHhhcccccccccCCHHHHHHHHHHHhhhcCCChHHHHHHHHHHHhcCchH
Q 039713          251 ERIIKEHQEARKINEEAGNDYTPNDLLDILLDISEDESSEIKLSRENIKSFIADMFAAGSDTPAITIEWALAQLINHPDV  330 (511)
Q Consensus       251 ~~~i~~~~~~~~~~~~~~~~~~~~dl~~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tta~~l~~~l~~L~~~P~~  330 (511)
                      .++++++++..... .    ....|+++.|+...      .+++++++.+++..+++||+|||+++++|++++|++||++
T Consensus       232 ~~~i~~r~~~~~~~-~----~~~~d~l~~ll~~~------~~~~~~ei~~~~~~l~~Ag~~tta~~l~~~l~~L~~~P~~  300 (472)
T PLN02987        232 TLVVMKRRKEEEEG-A----EKKKDMLAALLASD------DGFSDEEIVDFLVALLVAGYETTSTIMTLAVKFLTETPLA  300 (472)
T ss_pred             HHHHHHHHhhhhcc-C----cccccHHHHHHhcC------CCCCHHHHHHHHHHHHHhccchHHHHHHHHHHHHHhChHH
Confidence            99998876543221 0    12579999999752      1489999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhhhhCC---CCccCccccCCChhHHHHHHHhhccCC-CCccccccCCCeeecCeeeCCCCEEEeehhhcccC
Q 039713          331 MKKAREEIDSVVGK---SRLVEESDIVDLPYLQAIVKEVLRLHP-TPMAVRESTESFTINGYEIPAKTRVFINVWAICRD  406 (511)
Q Consensus       331 ~~~l~~Ei~~~~~~---~~~~~~~~~~~lp~l~a~i~E~lRl~p-~~~~~R~~~~~~~l~g~~Ipkg~~v~~~~~~~~~d  406 (511)
                      |+++++|++++.+.   +..++++++.++||++||++|+||++| ++...|.+.+|++++||.||||+.|+++.+.+|+|
T Consensus       301 ~~~l~~E~~~~~~~~~~~~~~~~~~l~~lpyl~a~i~EtLRl~p~~~~~~R~~~~d~~~~G~~ip~Gt~v~~~~~~~~~d  380 (472)
T PLN02987        301 LAQLKEEHEKIRAMKSDSYSLEWSDYKSMPFTQCVVNETLRVANIIGGIFRRAMTDIEVKGYTIPKGWKVFASFRAVHLD  380 (472)
T ss_pred             HHHHHHHHHHHHcccCCCCCCCHHHHhcChHHHHHHHHHHHccCCcCCccccCCCCeeECCEEECCCCEEEEehHHhhCC
Confidence            99999999998752   346788999999999999999999999 87777999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCcccCCCCCCCCCcCCCcceeeccCCCCCCCCChHHHHHHHHHHHHHHhhhcEeeecCCCCCCCcccc
Q 039713          407 PKYWENPFEFCPERFIGEDGKSQLDVRGQHYHYIPFGSGRRVCPGTTLALLMVQTTLAAMIQCFDWKVNGGDGTVDMEEA  486 (511)
Q Consensus       407 ~~~~~dp~~F~P~R~~~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~  486 (511)
                      |++|+||++||||||++++..     ......++|||+|+|.|+|+++|+.|++++++.|+++|+|++.++. +  .  .
T Consensus       381 ~~~~~~p~~F~PeRfl~~~~~-----~~~~~~~l~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~-~--~--~  450 (472)
T PLN02987        381 HEYFKDARTFNPWRWQSNSGT-----TVPSNVFTPFGGGPRLCPGYELARVALSVFLHRLVTRFSWVPAEQD-K--L--V  450 (472)
T ss_pred             cccCCCccccCcccCCCCCCC-----CCCCcceECCCCCCcCCCcHHHHHHHHHHHHHHHHhceEEEECCCC-c--e--e
Confidence            999999999999999975311     1134579999999999999999999999999999999999965422 2  2  2


Q ss_pred             cccccccCCceeEeeeecC
Q 039713          487 VGITLPRAHSLVCVPITML  505 (511)
Q Consensus       487 ~~~~~~~~~~~~~~~~~r~  505 (511)
                      ...++.|..++.+++++|+
T Consensus       451 ~~~~~~p~~~~~~~~~~r~  469 (472)
T PLN02987        451 FFPTTRTQKRYPINVKRRD  469 (472)
T ss_pred             ecccccCCCCceEEEEecc
Confidence            2346778888999999985


No 29 
>PLN02936 epsilon-ring hydroxylase
Probab=100.00  E-value=4.8e-69  Score=527.47  Aligned_cols=457  Identities=22%  Similarity=0.356  Sum_probs=352.3

Q ss_pred             CCCCCCCCCcccccccc-----CCCccHHHHHHHHhhCCeEEEecCCccEEEecCHHHHHHHHHhccccccCCCcccchh
Q 039713           34 FPPSPMALPIIGHLHLL-----APIPHQALHKLSIRYGPLIHFRLGSVPCVAVCSADVAKDFFKTHETSILNRPFLINVD  108 (511)
Q Consensus        34 ~ppgp~~~P~~G~~~~~-----~~~~~~~~~~~~~kyG~v~~~~~g~~~~v~v~dp~~~~~i~~~~~~~~~~~~~~~~~~  108 (511)
                      +=.|-.|||++|..+.+     ++.++..+.+|+++||+||++++|+.++|+++||+++++|+.+.+..|.+++......
T Consensus        13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~pe~~~~il~~~~~~f~~~~~~~~~~   92 (489)
T PLN02936         13 LWGDDSGIPVADAKLEDVTDLLGGALFLPLFKWMNEYGPVYRLAAGPRNFVVVSDPAIAKHVLRNYGSKYAKGLVAEVSE   92 (489)
T ss_pred             cCCCCCCCccHHhHHhhHHHHhccHHHHHHHHHHHHcCCEEEEccCCccEEEEcCHHHHHHHHHhccccccCcchhhhhH
Confidence            34567899999998876     5778999999999999999999999999999999999999987666776654322211


Q ss_pred             hhccCCcceeeccCchhhhhhhhhHHHhcCchHHHhhhhh-hHHHHHHHHHHHHHHHccCCCceehHHHHHHHHHHHHHH
Q 039713          109 YITYGSADFLFAPYGPYWKFMKKICMTQLLGGQTLNQFLP-IRFEEIRRFIRYVLKKAKASEEVDVGGQLIRLTNDVVTR  187 (511)
Q Consensus       109 ~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~-~i~~~~~~ll~~l~~~~~~~~~vdl~~~~~~~~~~vi~~  187 (511)
                      . ..|  ..++..+|+.|+.+|+.+. +.|+..++..+.+ .+.++++.+++.+.+....++++|+.+.+..+++|+++.
T Consensus        93 ~-~~~--~~i~~~~g~~wk~~Rk~l~-~~f~~~~l~~~~~~~~~~~~~~l~~~l~~~~~~g~~vd~~~~~~~~~~dvi~~  168 (489)
T PLN02936         93 F-LFG--SGFAIAEGELWTARRRAVV-PSLHRRYLSVMVDRVFCKCAERLVEKLEPVALSGEAVNMEAKFSQLTLDVIGL  168 (489)
T ss_pred             H-Hhc--CccccCCchHHHHHHHhhc-CccCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceeHHHHHHHHHHHHHHH
Confidence            1 123  3356678999999999985 9999988887654 678889999999988665677899999999999999999


Q ss_pred             HhhccccCCChHHHHHHHHHHHHHHhhhccCccccccchhhc--c-cccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 039713          188 MTMNYRCSDNEEEADEMRKVVSAATELTGKFNLADYIWFCKF--L-DLQGFGKRLKETLEKFDEMMERIIKEHQEARKIN  264 (511)
Q Consensus       188 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  264 (511)
                      ++||.+++..+.. .++...+......... .....+|++..  + ...+..++..++.+.+.+++.+.++++++..+..
T Consensus       169 ~~fG~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~p~~~~~~l~~~~p~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~  246 (489)
T PLN02936        169 SVFNYNFDSLTTD-SPVIQAVYTALKEAET-RSTDLLPYWKVDFLCKISPRQIKAEKAVTVIRETVEDLVDKCKEIVEAE  246 (489)
T ss_pred             HHcCCCccccccC-cHHHHHHHHHHHHHHH-hhhccchHHhhHHHhccChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence            9999998754322 2233333332222111 11112232211  0 0112234566777888888888888776543321


Q ss_pred             hhcC--C---CCCCCcHHHHHHhhcccccccccCCHHHHHHHHHHHhhhcCCChHHHHHHHHHHHhcCchHHHHHHHHHh
Q 039713          265 EEAG--N---DYTPNDLLDILLDISEDESSEIKLSRENIKSFIADMFAAGSDTPAITIEWALAQLINHPDVMKKAREEID  339 (511)
Q Consensus       265 ~~~~--~---~~~~~dl~~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tta~~l~~~l~~L~~~P~~~~~l~~Ei~  339 (511)
                      ....  .   .....|+++.|++..      ..++++++.++++.+++||+||||++++|++++|++||++|+++++|++
T Consensus       247 ~~~~~~~~~~~~~~~d~l~~ll~~~------~~~~~~~i~~~~~~~~~aG~dTta~~l~~~l~~L~~~p~~~~kl~~Ei~  320 (489)
T PLN02936        247 GEVIEGEEYVNDSDPSVLRFLLASR------EEVSSVQLRDDLLSMLVAGHETTGSVLTWTLYLLSKNPEALRKAQEELD  320 (489)
T ss_pred             ccccccccccccCchHHHHHHHhcc------ccCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence            1100  0   012467999988652      1388999999999999999999999999999999999999999999999


Q ss_pred             hhhCCCCccCccccCCChhHHHHHHHhhccCC-CCccccc-cCCCeeecCeeeCCCCEEEeehhhcccCCCCCCCCCCCC
Q 039713          340 SVVGKSRLVEESDIVDLPYLQAIVKEVLRLHP-TPMAVRE-STESFTINGYEIPAKTRVFINVWAICRDPKYWENPFEFC  417 (511)
Q Consensus       340 ~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~p-~~~~~R~-~~~~~~l~g~~Ipkg~~v~~~~~~~~~d~~~~~dp~~F~  417 (511)
                      ++++. +.++++++++||||+|||+||||++| ++...|. +.+|+.++||.||||+.|+++.+++||||++|+||++|+
T Consensus       321 ~~~~~-~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~r~~~~~~~~~g~~Ip~Gt~v~~~~~~~~rd~~~~~dP~~F~  399 (489)
T PLN02936        321 RVLQG-RPPTYEDIKELKYLTRCINESMRLYPHPPVLIRRAQVEDVLPGGYKVNAGQDIMISVYNIHRSPEVWERAEEFV  399 (489)
T ss_pred             HHhcC-CCCCHHHHhhCHHHHHHHHHhhhcCCCcccccceeccCccccCCeEECCCCEEEecHHhccCChhhCCCccccC
Confidence            99884 45788999999999999999999999 8888854 466777799999999999999999999999999999999


Q ss_pred             CCcccCCCCCCCCCcCCCcceeeccCCCCCCCCChHHHHHHHHHHHHHHhhhcEeeecCCCCCCCcccccccccccCCce
Q 039713          418 PERFIGEDGKSQLDVRGQHYHYIPFGSGRRVCPGTTLALLMVQTTLAAMIQCFDWKVNGGDGTVDMEEAVGITLPRAHSL  497 (511)
Q Consensus       418 P~R~~~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  497 (511)
                      ||||+.++....  ....+..++|||.|+|.|+|+++|++|++++++.|+++|+++..++ .++..  ..+++..++.++
T Consensus       400 PeRwl~~~~~~~--~~~~~~~~~pFg~G~R~C~G~~la~~~~~~~la~ll~~f~~~~~~~-~~~~~--~~~~~~~~~~~~  474 (489)
T PLN02936        400 PERFDLDGPVPN--ETNTDFRYIPFSGGPRKCVGDQFALLEAIVALAVLLQRLDLELVPD-QDIVM--TTGATIHTTNGL  474 (489)
T ss_pred             ccccCCCCCCcc--ccCCCcceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCeEEecCC-Cccce--ecceEEeeCCCe
Confidence            999996532111  1123457999999999999999999999999999999999995542 22322  235666678899


Q ss_pred             eEeeeecCCCC
Q 039713          498 VCVPITMLDPF  508 (511)
Q Consensus       498 ~~~~~~r~~~~  508 (511)
                      .|++++|+.+-
T Consensus       475 ~v~~~~R~~~~  485 (489)
T PLN02936        475 YMTVSRRRVPD  485 (489)
T ss_pred             EEEEEeeeCCC
Confidence            99999998653


No 30 
>PLN02426 cytochrome P450, family 94, subfamily C protein
Probab=100.00  E-value=1.9e-67  Score=514.82  Aligned_cols=438  Identities=20%  Similarity=0.275  Sum_probs=336.0

Q ss_pred             CCccccccccCCCccHHHHHHHHhhC-CeEEEecCCccEEEecCHHHHHHHHHhccccccCCCccc-chhhhccCCccee
Q 039713           41 LPIIGHLHLLAPIPHQALHKLSIRYG-PLIHFRLGSVPCVAVCSADVAKDFFKTHETSILNRPFLI-NVDYITYGSADFL  118 (511)
Q Consensus        41 ~P~~G~~~~~~~~~~~~~~~~~~kyG-~v~~~~~g~~~~v~v~dp~~~~~i~~~~~~~~~~~~~~~-~~~~~~~~~~~~~  118 (511)
                      .++.|++.....+.+..+..+.++++ .+++++..+.  ++++||+.+++++..+...|.+..... ..... .|  ..+
T Consensus        49 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--iv~~dpe~i~~vl~~~~~~~~k~~~~~~~~~~~-~g--~gi  123 (502)
T PLN02426         49 AYLTASWAKDFDNLCDWYAHLLRRSPTGTIHVHVLGN--TITANPENVEYMLKTRFDNYPKGKPFSAILGDL-LG--RGI  123 (502)
T ss_pred             CCccHHHHHhcccHHHHHHHHHHhCCCcEEEEecCCc--EEecCHHHHHHHHhhChhcCCCcHhHHHHHHHh-cC--Cce
Confidence            56888887654556777777888887 6788876554  899999999999987766665443221 11111 23  346


Q ss_pred             eccCchhhhhhhhhHHHhcCchHHHhhhh--hhHHHHHHHHHHHHHHHcc--CCCceehHHHHHHHHHHHHHHHhhcccc
Q 039713          119 FAPYGPYWKFMKKICMTQLLGGQTLNQFL--PIRFEEIRRFIRYVLKKAK--ASEEVDVGGQLIRLTNDVVTRMTMNYRC  194 (511)
Q Consensus       119 ~~~~g~~w~~~R~~~~~~~f~~~~l~~~~--~~i~~~~~~ll~~l~~~~~--~~~~vdl~~~~~~~~~~vi~~~~fG~~~  194 (511)
                      ++.+|+.|+.+||.+ ++.|+..+++.+.  +.+.+.++++++.+.+...  .++++|+.+++.++++|+++.++||.++
T Consensus       124 ~~~~g~~wk~~Rk~l-~~~fs~~~l~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~vd~~~~~~~~t~dvi~~~~fG~~~  202 (502)
T PLN02426        124 FNVDGDSWRFQRKMA-SLELGSVSIRSYAFEIVASEIESRLLPLLSSAADDGEGAVLDLQDVFRRFSFDNICKFSFGLDP  202 (502)
T ss_pred             eecCcHHHHHHHHHh-HhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCceEcHHHHHHHHHHHHHHHHHhCCCC
Confidence            778899999999998 5999999998764  5677777788888776532  2467999999999999999999999988


Q ss_pred             CCChH--HHHHHHHHHHHHHhhhccCccccccchhhc---ccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCC
Q 039713          195 SDNEE--EADEMRKVVSAATELTGKFNLADYIWFCKF---LDLQGFGKRLKETLEKFDEMMERIIKEHQEARKINEEAGN  269 (511)
Q Consensus       195 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~---~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~  269 (511)
                      +..+.  +..++.+.++.+....... .....|+++.   +...+..++..+..+.+.+++.++++++++...    .  
T Consensus       203 ~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~I~~r~~~~~----~--  275 (502)
T PLN02426        203 GCLELSLPISEFADAFDTASKLSAER-AMAASPLLWKIKRLLNIGSERKLKEAIKLVDELAAEVIRQRRKLGF----S--  275 (502)
T ss_pred             cccCCCCCccHHHHHHHHHHHHHHHH-HhcchhHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHHHhccc----C--
Confidence            75431  2234545444433221110 0111122211   111233456677788888888888888764311    1  


Q ss_pred             CCCCCcHHHHHHhhcccccccccCCHHHHHHHHHHHhhhcCCChHHHHHHHHHHHhcCchHHHHHHHHHhhhhCCC-Ccc
Q 039713          270 DYTPNDLLDILLDISEDESSEIKLSRENIKSFIADMFAAGSDTPAITIEWALAQLINHPDVMKKAREEIDSVVGKS-RLV  348 (511)
Q Consensus       270 ~~~~~dl~~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tta~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~-~~~  348 (511)
                        ...|+++.+++..        .+++++.++++.+++||+|||+++++|++|+|++||++|+|+++|++++++.+ ..+
T Consensus       276 --~~~dll~~ll~~~--------~~~~~l~~~~~~~l~AG~dTta~~l~~~l~~L~~~P~v~~kl~~Ei~~~~~~~~~~~  345 (502)
T PLN02426        276 --ASKDLLSRFMASI--------NDDKYLRDIVVSFLLAGRDTVASALTSFFWLLSKHPEVASAIREEADRVMGPNQEAA  345 (502)
T ss_pred             --CcchHHHHHHhcC--------CCHHHHHHHHHHHHHhccchHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhCCCCCCC
Confidence              2578999999752        26788999999999999999999999999999999999999999999998754 368


Q ss_pred             CccccCCChhHHHHHHHhhccCC-CCccccccCCCeee-cCeeeCCCCEEEeehhhcccCCCCC-CCCCCCCCCcccCCC
Q 039713          349 EESDIVDLPYLQAIVKEVLRLHP-TPMAVRESTESFTI-NGYEIPAKTRVFINVWAICRDPKYW-ENPFEFCPERFIGED  425 (511)
Q Consensus       349 ~~~~~~~lp~l~a~i~E~lRl~p-~~~~~R~~~~~~~l-~g~~Ipkg~~v~~~~~~~~~d~~~~-~dp~~F~P~R~~~~~  425 (511)
                      +++++.+||||+|||+|+||++| +|...|.+.+|.++ +||.|||||.|.++.+++||||++| +||++|+||||++++
T Consensus       346 t~~~l~~LpYl~avi~EtLRl~p~v~~~~r~~~~d~~~~~G~~Ip~Gt~V~~~~~~~~rd~~~~G~dp~~F~PeRwl~~~  425 (502)
T PLN02426        346 SFEEMKEMHYLHAALYESMRLFPPVQFDSKFAAEDDVLPDGTFVAKGTRVTYHPYAMGRMERIWGPDCLEFKPERWLKNG  425 (502)
T ss_pred             CHHHHhcChHHHHHHHHHHhCCCCCCCcceeeccCCCcCCCcEECCCCEEEEchHHhcCCccccCcChhhcCccccCCCC
Confidence            99999999999999999999999 88888999999888 9999999999999999999999999 999999999999742


Q ss_pred             CCCCCCcCCCcceeeccCCCCCCCCChHHHHHHHHHHHHHHhhhcEeeecCCCCCCCcccccccccccCCceeEeeeecC
Q 039713          426 GKSQLDVRGQHYHYIPFGSGRRVCPGTTLALLMVQTTLAAMIQCFDWKVNGGDGTVDMEEAVGITLPRAHSLVCVPITML  505 (511)
Q Consensus       426 ~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~  505 (511)
                      ..    ....+..++|||+|+|.|+|+++|++|++++++.|+++|+|+..++..+ ......++++.+..++.|++++|.
T Consensus       426 ~~----~~~~~~~~~pFg~G~R~CiG~~~A~~e~~~~la~ll~~f~~~~~~~~~~-~~~~~~~~~~~~~~gl~v~~~~r~  500 (502)
T PLN02426        426 VF----VPENPFKYPVFQAGLRVCLGKEMALMEMKSVAVAVVRRFDIEVVGRSNR-APRFAPGLTATVRGGLPVRVRERV  500 (502)
T ss_pred             Cc----CCCCCcccCCCCCCCCCCccHHHHHHHHHHHHHHHHHHceEEEecCCCC-CCcccceeEEecCCCEEEEEEEcc
Confidence            10    1124567999999999999999999999999999999999995432211 123334677888899999999986


Q ss_pred             C
Q 039713          506 D  506 (511)
Q Consensus       506 ~  506 (511)
                      .
T Consensus       501 ~  501 (502)
T PLN02426        501 R  501 (502)
T ss_pred             C
Confidence            4


No 31 
>PLN02648 allene oxide synthase
Probab=100.00  E-value=9.3e-60  Score=453.13  Aligned_cols=404  Identities=17%  Similarity=0.239  Sum_probs=293.0

Q ss_pred             CCCCCCCCCCCcccccccc-----CCCccHHHHHHHHhhCC-eEEEecCCccE-------EEecCHHHHHHHHHh----c
Q 039713           32 SYFPPSPMALPIIGHLHLL-----APIPHQALHKLSIRYGP-LIHFRLGSVPC-------VAVCSADVAKDFFKT----H   94 (511)
Q Consensus        32 ~~~ppgp~~~P~~G~~~~~-----~~~~~~~~~~~~~kyG~-v~~~~~g~~~~-------v~v~dp~~~~~i~~~----~   94 (511)
                      .+.|||+.++|++|+++.+     ..++..++.+.++|||+ ||+++++|.++       |+++||++++.+|..    +
T Consensus        16 ~~~PPg~~g~P~iG~~~~~~~~~~~~~~~~F~~~~~~kyG~~vfk~~l~g~p~~~~~~~~v~~~~~e~~~~v~~~~~~~~   95 (480)
T PLN02648         16 LREIPGSYGLPFLGAIKDRLDYFYFQGEDEFFRSRVEKYKSTVFRVNMPPGPFIAPDPRVIALLDQKSFPVLFDVSKVDK   95 (480)
T ss_pred             CCCCCCCCCCcCcchhhhhhhHHHhcChHHHHHHHHHHhCCceEEecCCCCCCCCCCCCEEEEEcCCceeeeecchhccc
Confidence            3569999999999999864     45668999999999999 99999988665       999999999999974    3


Q ss_pred             cccccCCCcccchhhhccCCc--ceeeccCchhhhhhhhhHHHhcCchHHHhhhhhhHHHHHHHHHHHHHHHccCCCcee
Q 039713           95 ETSILNRPFLINVDYITYGSA--DFLFAPYGPYWKFMKKICMTQLLGGQTLNQFLPIRFEEIRRFIRYVLKKAKASEEVD  172 (511)
Q Consensus        95 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~i~~~~~~ll~~l~~~~~~~~~vd  172 (511)
                      ...+.. .......  ..|+.  ..++..+|+.|+++|+.+. +.|+ ..++.+.+.+.+.++++++.|......++.+|
T Consensus        96 ~~~~~~-~~~~~~~--l~G~~~~~s~~~~~g~~H~r~Rrll~-~~f~-~~~~~~~~~m~~~~~~~~~~w~~~~~~~~~vd  170 (480)
T PLN02648         96 RDVFTG-TYMPSTA--FTGGYRVLSYLDPSEPKHAKLKSFLF-ELLK-SRHRRFIPEFRAAFAELFDTWEAELAKKGKAE  170 (480)
T ss_pred             ccccee-eeccCcc--ccCCceeeeecCCCCchHHHHHHHHH-HHHH-HhhhhhhhHHHHHHHHHHHHHHHHHhhCCCcc
Confidence            332332 1112222  23331  1566788999999999995 8999 57788999999999999999966434456799


Q ss_pred             hHHHHHHHHHHHHHHHhhccccCCChHHHHHHHHHHHHHHhhhccCccccccchhhcccccchHHH------------HH
Q 039713          173 VGGQLIRLTNDVVTRMTMNYRCSDNEEEADEMRKVVSAATELTGKFNLADYIWFCKFLDLQGFGKR------------LK  240 (511)
Q Consensus       173 l~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~------------~~  240 (511)
                      +.+.+..++++++++++||.+.+. ++-...+......+....       .+|..... .+...++            ..
T Consensus       171 v~~~~~~lt~~vi~~~lfG~~~~~-~~l~~~~~~~~~~~~~~~-------~~p~~~~~-l~~~~~~~i~~~~~~~~~~~~  241 (480)
T PLN02648        171 FNDPLDQMAFNFLCKALTGKDPSE-TALGSDGPALIQKWLALQ-------LAPLASTG-LPHVLEELLLHTFPLPFFLVK  241 (480)
T ss_pred             ccchHHHHHHHHHHHHHcCCCcch-hhhccchhHHHHHHHHHH-------hhHHHHcC-chHHHHHHhhcccCCchhhhh
Confidence            999999999999999999986654 111112222222211100       00110000 0000000            00


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCCCcHHHHHHhhcccccccccCCHHHHHHHHHH-HhhhcCCChHHHHHH
Q 039713          241 ETLEKFDEMMERIIKEHQEARKINEEAGNDYTPNDLLDILLDISEDESSEIKLSRENIKSFIAD-MFAAGSDTPAITIEW  319 (511)
Q Consensus       241 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~dl~~~ll~~~~~~~~~~~l~~~~i~~~~~~-~~~ag~~tta~~l~~  319 (511)
                      +..+.+.+++                       .+.++.++....+    .+++++++.++++. +.+++++||+++++|
T Consensus       242 ~~~~~~~~~~-----------------------~~~~~~ll~~~~~----~~l~~~ei~~~~l~~~~~~t~~~~~~~l~~  294 (480)
T PLN02648        242 SDYDKLYDFF-----------------------RASATEALDLAEK----FGISREEALHNLLFVLGFNAFGGFKIFFPA  294 (480)
T ss_pred             ccHHHHHHHH-----------------------HHHHHHHHHHHHh----cCCCHHHHHHHHHHHHHHHhhHHHHHHHHH
Confidence            0000111111                       1112233333222    24999999999875 446778888889999


Q ss_pred             HHHHHhcCch-HHHHHHHHHhhhhCC-CCccCccccCCChhHHHHHHHhhccCC-CCccccccCCCeeec----CeeeCC
Q 039713          320 ALAQLINHPD-VMKKAREEIDSVVGK-SRLVEESDIVDLPYLQAIVKEVLRLHP-TPMAVRESTESFTIN----GYEIPA  392 (511)
Q Consensus       320 ~l~~L~~~P~-~~~~l~~Ei~~~~~~-~~~~~~~~~~~lp~l~a~i~E~lRl~p-~~~~~R~~~~~~~l~----g~~Ipk  392 (511)
                      ++|+|++||+ +|+++++|++++++. ++.++++++.+|||+++||+|+||++| ++...|.+.+|++++    ||.|||
T Consensus       295 ~l~~L~~~p~~v~~klr~Ei~~~~~~~~~~~t~~~l~~l~yl~avi~EtLRl~p~v~~~~r~a~~d~~l~~~~~g~~Ipk  374 (480)
T PLN02648        295 LLKWVGRAGEELQARLAEEVRSAVKAGGGGVTFAALEKMPLVKSVVYEALRIEPPVPFQYGRAREDFVIESHDAAFEIKK  374 (480)
T ss_pred             HHHHHHcCCHHHHHHHHHHHHHHhccCCCCCCHHHHhcCHHHHHHHHHHHhhcCCcccccceecCCEEEecCCceEEECC
Confidence            9999999995 999999999999863 457899999999999999999999999 888889999999995    799999


Q ss_pred             CCEEEeehhhcccCCCCCCCCCCCCCCcccCCCCCCCCC--cCCCcceeeccCCCCCCCCChHHHHHHHHHHHHHHhhhc
Q 039713          393 KTRVFINVWAICRDPKYWENPFEFCPERFIGEDGKSQLD--VRGQHYHYIPFGSGRRVCPGTTLALLMVQTTLAAMIQCF  470 (511)
Q Consensus       393 g~~v~~~~~~~~~d~~~~~dp~~F~P~R~~~~~~~~~~~--~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~~~~ll~~~  470 (511)
                      |+.|+++.+.+||||++|+||++|||+||++++......  .-+......+||+|+|.|+|++||++|++++++.|+++|
T Consensus       375 G~~V~~~~~~~hrdp~~~~dP~~F~PeRf~~~~~~~~~~~~~f~~g~~~~~~G~G~R~C~G~~~A~~e~~~~la~Ll~~f  454 (480)
T PLN02648        375 GEMLFGYQPLVTRDPKVFDRPEEFVPDRFMGEEGEKLLKYVFWSNGRETESPTVGNKQCAGKDFVVLVARLFVAELFLRY  454 (480)
T ss_pred             CCEEEEChHHHhCCcccCCCcceeCCCCCCCCCccccccccccCCCcccCCCCCCCccCccHHHHHHHHHHHHHHHHHHh
Confidence            999999999999999999999999999998753211000  000011223447788999999999999999999999999


Q ss_pred             E-eeecC
Q 039713          471 D-WKVNG  476 (511)
Q Consensus       471 ~-~~~~~  476 (511)
                      + |+...
T Consensus       455 ~~~~l~~  461 (480)
T PLN02648        455 DSFEIEV  461 (480)
T ss_pred             CEEeecC
Confidence            8 88654


No 32 
>COG2124 CypX Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00  E-value=9.5e-55  Score=414.01  Aligned_cols=381  Identities=25%  Similarity=0.337  Sum_probs=298.5

Q ss_pred             ccHHHHHHHHhhCCeEEEecCCcc--EEEecCHHHHHHHHHhccccccCCCc---ccchhhhccCCcceeeccCchhhhh
Q 039713           54 PHQALHKLSIRYGPLIHFRLGSVP--CVAVCSADVAKDFFKTHETSILNRPF---LINVDYITYGSADFLFAPYGPYWKF  128 (511)
Q Consensus        54 ~~~~~~~~~~kyG~v~~~~~g~~~--~v~v~dp~~~~~i~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~g~~w~~  128 (511)
                      +......+.+.||.+++++..++.  +++++++++++++++++. .++....   .........|. ..+...||+.|.+
T Consensus        24 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~s~~~~v~~v~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~ll~~dg~~H~r  101 (411)
T COG2124          24 PRFFLERAEDPYGDYFTLRLPGPGDGFWVVSRPADVREVLRDPR-FFSSALGAGLRPRLLRPVLGD-GSLLTLDGPEHTR  101 (411)
T ss_pred             hhhhHHHHhCCCchhhhhhccCccceEEEEcCHHHHHHHHcCcc-cccccccccccccchhhhccc-cceeecCCHHHHH
Confidence            455667788999999998876655  899999999999998763 1222111   11111222332 3377789999999


Q ss_pred             hhhhHHHhcCchHHHhhhhhhHHHHHHHHHHHHHHHccCCCceehHHHHHHHHHHHHHHHhhccccCCChHHHHHHHHHH
Q 039713          129 MKKICMTQLLGGQTLNQFLPIRFEEIRRFIRYVLKKAKASEEVDVGGQLIRLTNDVVTRMTMNYRCSDNEEEADEMRKVV  208 (511)
Q Consensus       129 ~R~~~~~~~f~~~~l~~~~~~i~~~~~~ll~~l~~~~~~~~~vdl~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~  208 (511)
                      +||.++ +.|+++.++.+.+.+.+.++++++.+ .  .. +..++.+....+++++++ .+||.+.+..    ..+....
T Consensus       102 ~Rkl~~-~~F~~~~~~~~~~~i~~~~~~~~~~~-~--~~-~~~~v~~~a~~l~~~vi~-~l~Gv~~~~~----~~~~~~~  171 (411)
T COG2124         102 LRKLLA-PAFTPRALRGYRPLIREIADRLLDDL-W--QG-GADLVLDFAAELTLRVIA-ELLGVPLEDR----PQLLRWS  171 (411)
T ss_pred             HHHHhc-cccCHHHHHHHHHHHHHHHHHHHHhc-c--cC-CchhHHHHhhhhhHHHHH-HHhCCCHHHH----HHHHHHH
Confidence            999995 99999999999999999999999988 3  22 678899999999999999 9999877632    2222222


Q ss_pred             HHHHhhhccCccccccchhhcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCCCcHHHHHHhhccccc
Q 039713          209 SAATELTGKFNLADYIWFCKFLDLQGFGKRLKETLEKFDEMMERIIKEHQEARKINEEAGNDYTPNDLLDILLDISEDES  288 (511)
Q Consensus       209 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~dl~~~ll~~~~~~~  288 (511)
                      ........        |..   .......+..++...+.+++..++++++..           ..+|+++.|+.+..++.
T Consensus       172 ~~~~~~~~--------~~~---~~~~~~~~~~~a~~~~~~~~~~li~~rR~~-----------~~~dlls~l~~a~~~~~  229 (411)
T COG2124         172 DALLLRLD--------PDL---GPEEPWRRARAARRELDAYLRALIAERRAA-----------PRDDLLSLLLSAEDDGG  229 (411)
T ss_pred             HHHHhccC--------ccc---CCcccHHHHHHHHHHHHHHHHHHHHHhccC-----------CcccHHHHHHHHhhCCC
Confidence            22222100        111   011224567788899999999999988721           47899999998854432


Q ss_pred             ccccCCHHHHHHHHHHHhhhcCCChHHHHHHHHHHHhcCchHHHHHHHHHhhhhCCCCccCccccCCChhHHHHHHHhhc
Q 039713          289 SEIKLSRENIKSFIADMFAAGSDTPAITIEWALAQLINHPDVMKKAREEIDSVVGKSRLVEESDIVDLPYLQAIVKEVLR  368 (511)
Q Consensus       289 ~~~~l~~~~i~~~~~~~~~ag~~tta~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~~~~~lp~l~a~i~E~lR  368 (511)
                        ..+|++||.++++.+++||+|||+++|+|++|.|++||++++++++|.+.                ||++++|+|+||
T Consensus       230 --~~lsd~Ei~~~~~~ll~AGheTTa~~l~~a~~~L~~~P~~~~~l~~e~~~----------------~~~~~~v~E~LR  291 (411)
T COG2124         230 --GRLSDDEIRDELITLLVAGHETTANALAWALYALLRHPDQLAKLRAEPDR----------------PLLEAVVEETLR  291 (411)
T ss_pred             --CcCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHCchHHHHHHhCcch----------------HHHHHHHHHHHH
Confidence              26999999999999999999999999999999999999999999998643                899999999999


Q ss_pred             cCC-CCccccccCCCeeecCeeeCCCCEEEeehhhcccCCCCCCCCCCCCCCcccCCCCCCCCCcCCCcceeeccCCCCC
Q 039713          369 LHP-TPMAVRESTESFTINGYEIPAKTRVFINVWAICRDPKYWENPFEFCPERFIGEDGKSQLDVRGQHYHYIPFGSGRR  447 (511)
Q Consensus       369 l~p-~~~~~R~~~~~~~l~g~~Ipkg~~v~~~~~~~~~d~~~~~dp~~F~P~R~~~~~~~~~~~~~~~~~~~~~Fg~G~r  447 (511)
                      ++| ++...|.+++|++++|+.||||+.|+++.+++||||++|+||++|||+||.              ..++|||+|+|
T Consensus       292 ~~ppv~~~~R~~~~d~~igg~~Ip~G~~V~~~~~~anrDp~~f~~P~~F~p~R~~--------------~~~l~FG~G~H  357 (411)
T COG2124         292 LYPPVPLARRVATEDVELGGYRIPAGTVVLLSIGAANRDPEVFPDPDEFDPERFN--------------NAHLPFGGGPH  357 (411)
T ss_pred             hCCchhccceeccCCEeeCCEEeCCCCEEEecHhhhcCChhhCCChhhcCCCCCC--------------CCCcCCCCCCc
Confidence            999 888559999999999999999999999999999999999999999999986              26999999999


Q ss_pred             CCCChHHHHHHHHHHHHHHhhhcEeeecCCCCCCCcccccccccccCCceeEeeeec
Q 039713          448 VCPGTTLALLMVQTTLAAMIQCFDWKVNGGDGTVDMEEAVGITLPRAHSLVCVPITM  504 (511)
Q Consensus       448 ~C~G~~~a~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r  504 (511)
                      .|+|.+||++|++++++.|+++|++....+ . ....  ...+..+..+..+.++.|
T Consensus       358 ~ClG~~lA~~E~~~~l~~ll~r~~~~~~~~-~-~~~~--~~~~~~~~g~~~l~v~~~  410 (411)
T COG2124         358 RCLGAALARLELKVALAELLRRFPLLLLAE-P-PPLV--RRPTLVPRGGERLPVRRR  410 (411)
T ss_pred             cccCHHHHHHHHHHHHHHHHHhCchhhcCC-C-CCcc--ccccccCCCcceeeeecC
Confidence            999999999999999999999999983322 1 1121  233344455555555543


No 33 
>PF12508 DUF3714:  Protein of unknown function (DUF3714) ;  InterPro: IPR022187  Proteins in this entry are designated TraM and are found in a proposed transfer region of a class of conjugative transposon found in the Bacteroides lineage. 
Probab=67.53  E-value=1.9  Score=36.42  Aligned_cols=44  Identities=18%  Similarity=0.186  Sum_probs=31.9

Q ss_pred             CChhHHHHHHHhhccCCCCccccccCCCeeecCeeeCCCCEEEe
Q 039713          355 DLPYLQAIVKEVLRLHPTPMAVRESTESFTINGYEIPAKTRVFI  398 (511)
Q Consensus       355 ~lp~l~a~i~E~lRl~p~~~~~R~~~~~~~l~g~~Ipkg~~v~~  398 (511)
                      .-....|||.|+.-.......-=+..+|+.++|..|||||.|.-
T Consensus        51 ~~n~I~A~V~~~qtv~~Gs~vrlRLle~i~i~g~~IPkgt~l~G   94 (200)
T PF12508_consen   51 EKNTIRAVVDGTQTVVDGSRVRLRLLEDIQIGGILIPKGTYLYG   94 (200)
T ss_pred             CCCeEEEEEecceEEeCCCEEEEEEcCceEECCEEeCCCCEEEE
Confidence            34567788999877664222222357899999999999998765


No 34 
>PF05952 ComX:  Bacillus competence pheromone ComX;  InterPro: IPR009233 Competence is the ability of a cell to take up exogenous DNA from its environment, resulting in transformation. It is widespread among bacteria and is probably an important mechanism for the horizontal transfer of genes. Cells that take up DNA inevitably acquire the nucleotides the DNA consists of, and, because nucleotides are needed for DNA and RNA synthesis and are expensive to synthesise, these may make a significant contribution to the cell's energy budget []. The lateral gene transfer caused by competence also contributes to the genetic diversity that makes evolution possible.  DNA usually becomes available by the death and lysis of other cells. Competent bacteria use components of extracellular filaments called type 4 pili to create pores in their membranes and pull DNA through the pores into the cytoplasm. This process, including the development of competence and the expression of the uptake machinery, is regulated in response to cell-cell signalling and/or nutritional conditions []. Natural genetic competence in Bacillus subtilis is controlled by quorum-sensing (QS). The ComP- ComA two-component system detects the signalling molecule ComX, and this signal is transduced by a conserved phosphotransfer mechanism. ComX is synthesised as an inactive precursor and is then cleaved and modified by ComQ before export to the extracellular environment [].
Probab=58.54  E-value=4.7  Score=25.90  Aligned_cols=25  Identities=28%  Similarity=0.529  Sum_probs=19.4

Q ss_pred             HHHHHHhcCchHHHHHHHHHhhhhC
Q 039713          319 WALAQLINHPDVMKKAREEIDSVVG  343 (511)
Q Consensus       319 ~~l~~L~~~P~~~~~l~~Ei~~~~~  343 (511)
                      -++.||.+||++.+++.+.=.+.+|
T Consensus         4 ~iV~YLv~nPevl~kl~~g~asLIG   28 (57)
T PF05952_consen    4 EIVNYLVQNPEVLEKLKEGEASLIG   28 (57)
T ss_pred             HHHHHHHHChHHHHHHHcCCeeEec
Confidence            4678999999999999985444443


No 35 
>PF12554 MOZART1:  Mitotic-spindle organizing gamma-tubulin ring associated;  InterPro: IPR022214  This family of proteins is found in eukaryotes. Proteins in this family are typically between 71 and 105 amino acids in length. There is a single completely conserved residue L that may be functionally important. 
Probab=55.73  E-value=38  Score=21.02  Aligned_cols=42  Identities=19%  Similarity=0.335  Sum_probs=29.3

Q ss_pred             HHHHHHHHHhhhcCCChHHHHHHHHHHHhcCchHHHHHHHHH
Q 039713          297 NIKSFIADMFAAGSDTPAITIEWALAQLINHPDVMKKAREEI  338 (511)
Q Consensus       297 ~i~~~~~~~~~ag~~tta~~l~~~l~~L~~~P~~~~~l~~Ei  338 (511)
                      ++...+..++-.|.|..+-.++--+....-||+.+..+..|+
T Consensus         6 d~l~eiS~lLntgLd~etL~ici~L~e~GVnPeaLA~vI~el   47 (48)
T PF12554_consen    6 DVLHEISDLLNTGLDRETLSICIELCENGVNPEALAAVIKEL   47 (48)
T ss_pred             HHHHHHHHHHcCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHh
Confidence            345555566666777777777777777777888888887775


No 36 
>PRK06789 flagellar motor switch protein; Validated
Probab=50.95  E-value=19  Score=24.76  Aligned_cols=38  Identities=13%  Similarity=0.218  Sum_probs=30.3

Q ss_pred             HHHHhhccCC-CCccc-cccCCCeee--cCeeeCCCCEEEee
Q 039713          362 IVKEVLRLHP-TPMAV-RESTESFTI--NGYEIPAKTRVFIN  399 (511)
Q Consensus       362 ~i~E~lRl~p-~~~~~-R~~~~~~~l--~g~~Ipkg~~v~~~  399 (511)
                      -++|-+.+.+ ..... |.+.++..+  +|..|.+|..|.++
T Consensus        21 ~i~dll~L~~Gsvi~Ldk~~~epvdI~vNg~lia~GEvVvv~   62 (74)
T PRK06789         21 KIEDLLHITKGTLYRLENSTKNTVRLMLENEEIGTGKILTKN   62 (74)
T ss_pred             EHHHHhcCCCCCEEEeCCcCCCCEEEEECCEEEeEEeEEEEC
Confidence            3688899999 55555 888776665  99999999999875


No 37 
>KOG3506 consensus 40S ribosomal protein S29 [Translation, ribosomal structure and biogenesis]
Probab=48.30  E-value=8  Score=24.28  Aligned_cols=11  Identities=45%  Similarity=0.954  Sum_probs=9.2

Q ss_pred             eccCCCCCCCC
Q 039713          440 IPFGSGRRVCP  450 (511)
Q Consensus       440 ~~Fg~G~r~C~  450 (511)
                      -+||-|+|.|-
T Consensus        12 ~kfg~GsrsC~   22 (56)
T KOG3506|consen   12 RKFGQGSRSCR   22 (56)
T ss_pred             cccCCCCccee
Confidence            47999999884


No 38 
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=47.89  E-value=81  Score=30.67  Aligned_cols=47  Identities=17%  Similarity=0.154  Sum_probs=25.1

Q ss_pred             CccHHHHHH-HHhhCCeEEEecCCccEEEecCHHHHHHHHHhcccccc
Q 039713           53 IPHQALHKL-SIRYGPLIHFRLGSVPCVAVCSADVAKDFFKTHETSIL   99 (511)
Q Consensus        53 ~~~~~~~~~-~~kyG~v~~~~~g~~~~v~v~dp~~~~~i~~~~~~~~~   99 (511)
                      ++...+.-. .-+||.|++-.+-++.+-|=.=|..-++=+.++...|+
T Consensus       210 ~pl~l~eli~~Grfg~V~KaqL~~~~VAVKifp~~~kqs~~~Ek~Iy~  257 (534)
T KOG3653|consen  210 DPLQLLELIGRGRFGCVWKAQLDNRLVAVKIFPEQEKQSFQNEKNIYS  257 (534)
T ss_pred             CchhhHHHhhcCccceeehhhccCceeEEEecCHHHHHHHHhHHHHHh
Confidence            333444333 33688898877766665553334444444544444444


No 39 
>PHA03049 IMV membrane protein; Provisional
Probab=45.09  E-value=60  Score=21.49  Aligned_cols=33  Identities=18%  Similarity=0.198  Sum_probs=15.4

Q ss_pred             HHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCc
Q 039713           11 SLIWLVSLILARSILRRSKRTSYFPPSPMALPI   43 (511)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~~~~~~ppgp~~~P~   43 (511)
                      +.++++..+.++-++.+.......||-|-..+-
T Consensus         9 iICVaIi~lIvYgiYnkk~~~q~~~p~~e~ye~   41 (68)
T PHA03049          9 IICVVIIGLIVYGIYNKKTTTSQNPPSQEKYEK   41 (68)
T ss_pred             HHHHHHHHHHHHHHHhcccccCCCCCChhhccC
Confidence            333334444445555555555455554443433


No 40 
>TIGR03779 Bac_Flav_CT_M Bacteroides conjugative transposon TraM protein. Members of this protein family are designated TraM and are found in a proposed transfer region of a class of conjugative transposon found in the Bacteroides lineage.
Probab=39.09  E-value=11  Score=35.91  Aligned_cols=45  Identities=16%  Similarity=0.123  Sum_probs=32.6

Q ss_pred             CChhHHHHHHHhhccCCCCccccccCCCeeecCeeeCCCCEEEee
Q 039713          355 DLPYLQAIVKEVLRLHPTPMAVRESTESFTINGYEIPAKTRVFIN  399 (511)
Q Consensus       355 ~lp~l~a~i~E~lRl~p~~~~~R~~~~~~~l~g~~Ipkg~~v~~~  399 (511)
                      ....+.|||.|+.-+.-....-=+..+|+.++|..|||||.|...
T Consensus       254 ~~n~I~A~V~~~qtv~~G~~vrlRLle~~~v~~~~ipkgt~l~g~  298 (410)
T TIGR03779       254 ERNTIRACVHETQTVVDGSAVKLRLLEPIQAGDLVIPKGTVLYGT  298 (410)
T ss_pred             CCCceEEEEcCceEEecCCEEEEEEcCceeeCCEEecCCCEEEEE
Confidence            456788888888877642222123578999999999999987654


No 41 
>PF10717 ODV-E18:  Occlusion-derived virus envelope protein ODV-E18;  InterPro: IPR019655  Baculovirus occlusion-derived virus (ODV) derives its envelope from an intranuclear membrane source. Occlusion-derived viral envelope proteins that are detected in viral-induced intranuclear microvesicles, but not detected in the plasma membrane, cytoplasmic membranes, or the nuclear envelope. This entry represents ODV-E18 protein which is encoded by baculovirus late genes with transcription initiating from a TAAG motif. ODV-E18 exists as a dimer in the ODV envelope, which contains a hydrophobic domain that putatively acts as a target or retention signal for intranuclear microvesicles []. ; GO: 0019031 viral envelope
Probab=38.44  E-value=59  Score=22.73  Aligned_cols=11  Identities=27%  Similarity=0.416  Sum_probs=4.1

Q ss_pred             HHHHHHHHHHh
Q 039713           16 VSLILARSILR   26 (511)
Q Consensus        16 ~~~~~~~~~~~   26 (511)
                      +.++++..++.
T Consensus        35 VIIiLlImlfq   45 (85)
T PF10717_consen   35 VIIILLIMLFQ   45 (85)
T ss_pred             HHHHHHHHHHh
Confidence            33333333333


No 42 
>COG0851 MinE Septum formation topological specificity factor [Cell division and chromosome partitioning]
Probab=36.82  E-value=65  Score=22.91  Aligned_cols=17  Identities=41%  Similarity=0.692  Sum_probs=15.2

Q ss_pred             chHHHHHHHHHhhhhCC
Q 039713          328 PDVMKKAREEIDSVVGK  344 (511)
Q Consensus       328 P~~~~~l~~Ei~~~~~~  344 (511)
                      |++.+.+|+||-+++..
T Consensus        36 pd~l~~Lr~eIl~VI~K   52 (88)
T COG0851          36 PDYLEQLRKEILEVISK   52 (88)
T ss_pred             cchHHHHHHHHHHHHHH
Confidence            89999999999988764


No 43 
>PHA03162 hypothetical protein; Provisional
Probab=33.75  E-value=27  Score=26.80  Aligned_cols=24  Identities=17%  Similarity=0.444  Sum_probs=19.5

Q ss_pred             CCCCCCCCChHHHHHHHHHHHHHH
Q 039713          443 GSGRRVCPGTTLALLMVQTTLAAM  466 (511)
Q Consensus       443 g~G~r~C~G~~~a~~~~~~~~~~l  466 (511)
                      ++|++.|||+...+-++..=|++|
T Consensus         2 ~~~~k~~pk~~~tmEeLaaeL~kL   25 (135)
T PHA03162          2 AGGSKKCPKAQPTMEDLAAEIAKL   25 (135)
T ss_pred             CCCcCCCCccCCCHHHHHHHHHHH
Confidence            569999999998888877666665


No 44 
>COG3763 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=33.17  E-value=51  Score=22.20  Aligned_cols=27  Identities=22%  Similarity=0.311  Sum_probs=15.6

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHhhcCC
Q 039713            4 FSGCIILSLIWLVSLILARSILRRSKR   30 (511)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~   30 (511)
                      ...++++++.++++++.++++.++...
T Consensus         4 ~lail~ivl~ll~G~~~G~fiark~~~   30 (71)
T COG3763           4 WLAILLIVLALLAGLIGGFFIARKQMK   30 (71)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            333455555566666667777666433


No 45 
>COG1707 ACT domain-containing protein [General function prediction only]
Probab=32.87  E-value=49  Score=26.66  Aligned_cols=38  Identities=24%  Similarity=0.276  Sum_probs=28.8

Q ss_pred             CCCccHHHHHHHHhhC-CeEEEecCC-cc---EEEecCHHHHH
Q 039713           51 APIPHQALHKLSIRYG-PLIHFRLGS-VP---CVAVCSADVAK   88 (511)
Q Consensus        51 ~~~~~~~~~~~~~kyG-~v~~~~~g~-~~---~v~v~dp~~~~   88 (511)
                      ++...+..+++.+++| ||.++++.| .|   -++|+||-.+-
T Consensus       153 GGkIteaVk~lr~~hgI~VISL~M~GSVpdVADlVvtDPvqAG  195 (218)
T COG1707         153 GGKITEAVKELREEHGIPVISLNMFGSVPDVADLVVTDPVQAG  195 (218)
T ss_pred             cchHHHHHHHHHHhcCCeEEEeccCCCCcchhheeecCchHhh
Confidence            5778889999999999 999998754 22   35778875443


No 46 
>COG4736 CcoQ Cbb3-type cytochrome oxidase, subunit 3 [Posttranslational modification, protein turnover, chaperones]
Probab=32.51  E-value=42  Score=21.98  Aligned_cols=27  Identities=15%  Similarity=0.059  Sum_probs=14.8

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHhhcCC
Q 039713            4 FSGCIILSLIWLVSLILARSILRRSKR   30 (511)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~   30 (511)
                      +...+++++..+.++.+.+++++..++
T Consensus         9 ~a~a~~t~~~~l~fiavi~~ayr~~~K   35 (60)
T COG4736           9 FADAWGTIAFTLFFIAVIYFAYRPGKK   35 (60)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcccch
Confidence            344455555555555555666665443


No 47 
>PF13893 RRM_5:  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain); PDB: 2PE8_A 2PEH_A 2D9O_A 1A9N_D 2DIT_A 3S6E_A 2LQ5_A 1SJQ_A 2AD9_A 1X4D_A ....
Probab=31.74  E-value=1.3e+02  Score=18.80  Aligned_cols=35  Identities=20%  Similarity=0.287  Sum_probs=24.5

Q ss_pred             HHHHHHhhCCeEEEecCC----ccEEEecCHHHHHHHHH
Q 039713           58 LHKLSIRYGPLIHFRLGS----VPCVAVCSADVAKDFFK   92 (511)
Q Consensus        58 ~~~~~~kyG~v~~~~~g~----~~~v~v~dp~~~~~i~~   92 (511)
                      +.++..+||+|-++.+..    .-+|-..+++.++....
T Consensus         1 L~~~f~~fG~V~~i~~~~~~~~~a~V~f~~~~~A~~a~~   39 (56)
T PF13893_consen    1 LYKLFSKFGEVKKIKIFKKKRGFAFVEFASVEDAQKAIE   39 (56)
T ss_dssp             HHHHHTTTS-EEEEEEETTSTTEEEEEESSHHHHHHHHH
T ss_pred             ChHHhCCcccEEEEEEEeCCCCEEEEEECCHHHHHHHHH
Confidence            356778999998887643    34556678888888775


No 48 
>PF09201 SRX:  SRX;  InterPro: IPR015284  The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. The SR receptor is a monomer consisting of the loosely membrane-associated SR-alpha homologue FtsY, while the eukaryotic SR receptor is a heterodimer of SR-alpha (70 kDa) and SR-beta (25 kDa), both of which contain a GTP-binding domain []. SR-alpha regulates the targeting of SRP-ribosome-nascent polypeptide complexes to the translocon []. SR-alpha binds to the SRP54 subunit of the SRP complex. The SR-beta subunit is a transmembrane GTPase that anchors the SR-alpha subunit (a peripheral membrane GTPase) to the ER membrane []. SR-beta interacts with the N-terminal SRX-domain of SR-alpha, which is not present in the bacterial FtsY homologue. SR-beta also functions in recruiting the SRP-nascent polypeptide to the protein-conducting channel.  This entry represents a homologue of the alpha subunit of the SR receptor. Members of this entry consist of a central six-stranded anti-parallel beta-sheet sandwiched by helix alpha1 on one side and helices alpha2-alpha4 on the other. They interact with the small GTPase SR-beta, forming a complex that matches a class of small G protein-effector complexes, including Rap-Raf, Ras-PI3K(gamma), Ras-RalGDS, and Arl2-PDE(delta) []. ; PDB: 1NRJ_A.
Probab=31.12  E-value=45  Score=25.96  Aligned_cols=22  Identities=14%  Similarity=0.365  Sum_probs=16.4

Q ss_pred             CCCChHHHHHHHHHHHHHHhhh
Q 039713          448 VCPGTTLALLMVQTTLAAMIQC  469 (511)
Q Consensus       448 ~C~G~~~a~~~~~~~~~~ll~~  469 (511)
                      .|.|+.||..++-.+++.|+..
T Consensus        19 N~~gKKFsE~QiN~FIs~lIts   40 (148)
T PF09201_consen   19 NCLGKKFSETQINAFISHLITS   40 (148)
T ss_dssp             ETTS----HHHHHHHHHHHHHS
T ss_pred             cccchHHHHHHHHHHHHHHhcC
Confidence            7999999999999999999863


No 49 
>PF02468 PsbN:  Photosystem II reaction centre N protein (psbN);  InterPro: IPR003398 Oxygenic photosynthesis uses two multi-subunit photosystems (I and II) located in the cell membranes of cyanobacteria and in the thylakoid membranes of chloroplasts in plants and algae. Photosystem II (PSII) has a P680 reaction centre containing chlorophyll 'a' that uses light energy to carry out the oxidation (splitting) of water molecules, and to produce ATP via a proton pump. Photosystem I (PSI) has a P700 reaction centre containing chlorophyll that takes the electron and associated hydrogen donated from PSII to reduce NADP+ to NADPH. Both ATP and NADPH are subsequently used in the light-independent reactions to convert carbon dioxide to glucose using the hydrogen atom extracted from water by PSII, releasing oxygen as a by-product. PSII is a multisubunit protein-pigment complex containing polypeptides both intrinsic and extrinsic to the photosynthetic membrane [, ]. Within the core of the complex, the chlorophyll and beta-carotene pigments are mainly bound to the antenna proteins CP43 (PsbC) and CP47 (PsbB), which pass the excitation energy on to the reaction centre proteins D1 (Qb, PsbA) and D2 (Qa, PsbD) that bind all the redox-active cofactors involved in the energy conversion process. The PSII oxygen-evolving complex (OEC) oxidises water to provide protons for use by PSI, and consists of OEE1 (PsbO), OEE2 (PsbP) and OEE3 (PsbQ). The remaining subunits in PSII are of low molecular weight (less than 10 kDa), and are involved in PSII assembly, stabilisation, dimerisation, and photo-protection [].   This family represents the low molecular weight transmembrane protein PsbN found in PSII. PsbN may have a role in PSII stability, however its actual function unknown. PsbN does not appear to be essential for photoautotrophic growth or normal PSII function.; GO: 0015979 photosynthesis, 0009523 photosystem II, 0009539 photosystem II reaction center, 0016020 membrane
Probab=30.41  E-value=1e+02  Score=18.63  Aligned_cols=20  Identities=25%  Similarity=0.096  Sum_probs=11.1

Q ss_pred             CCCchhHHHHHHHHHHHHHH
Q 039713            1 MADFSGCIILSLIWLVSLIL   20 (511)
Q Consensus         1 m~~~~~~~~~~~~~~~~~~~   20 (511)
                      |+-+.+..+.+.++++++..
T Consensus         1 Me~a~~~~i~i~~~lv~~Tg   20 (43)
T PF02468_consen    1 METATVLAIFISCLLVSITG   20 (43)
T ss_pred             CCceeeHHHHHHHHHHHHHh
Confidence            66665555555555554444


No 50 
>PF05961 Chordopox_A13L:  Chordopoxvirus A13L protein;  InterPro: IPR009236 This family consists of A13L proteins from the Chordopoxviruses. A13L or p8 is one of the three most abundant membrane proteins of the intracellular mature Vaccinia virus [].
Probab=30.16  E-value=1.5e+02  Score=19.82  Aligned_cols=25  Identities=24%  Similarity=0.203  Sum_probs=10.3

Q ss_pred             HHHHHHHHHHHHHhhcCCCCCCCCC
Q 039713           13 IWLVSLILARSILRRSKRTSYFPPS   37 (511)
Q Consensus        13 ~~~~~~~~~~~~~~~~~~~~~~ppg   37 (511)
                      ++++..+.++.++.+.......+|-
T Consensus        11 CVaii~lIlY~iYnr~~~~q~~~~~   35 (68)
T PF05961_consen   11 CVAIIGLILYGIYNRKKTTQNTNPS   35 (68)
T ss_pred             HHHHHHHHHHHHHhcccccCCCCCc
Confidence            3333333444455554443333443


No 51 
>PF05568 ASFV_J13L:  African swine fever virus J13L protein;  InterPro: IPR008385 This family consists of several African swine fever virus (ASFV) j13L proteins [, , ].
Probab=29.98  E-value=61  Score=25.25  Aligned_cols=6  Identities=50%  Similarity=0.357  Sum_probs=2.3

Q ss_pred             HHHHHH
Q 039713            9 ILSLIW   14 (511)
Q Consensus         9 ~~~~~~   14 (511)
                      +++.++
T Consensus        34 ILiaIv   39 (189)
T PF05568_consen   34 ILIAIV   39 (189)
T ss_pred             HHHHHH
Confidence            333333


No 52 
>TIGR00589 ogt O-6-methylguanine DNA methyltransferase. All proteins in this family for which functions are known are involved alkyl-DNA transferases which remove alkyl groups from DNA as part of alkylation DNA repair. Some of the proteins in this family are also transcription regulators and have a distinct transcription regulatory domain. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=28.75  E-value=96  Score=21.80  Aligned_cols=59  Identities=10%  Similarity=0.135  Sum_probs=40.8

Q ss_pred             hHHHHHHHHHhhhhCCCCccCccccC---CChhHHHHHHHhhccCC-CCccc--cccCCCeeecCe
Q 039713          329 DVMKKAREEIDSVVGKSRLVEESDIV---DLPYLQAIVKEVLRLHP-TPMAV--RESTESFTINGY  388 (511)
Q Consensus       329 ~~~~~l~~Ei~~~~~~~~~~~~~~~~---~lp~l~a~i~E~lRl~p-~~~~~--R~~~~~~~l~g~  388 (511)
                      +.|.++.+.+.+ ++.+...++.++.   ..|---..|--+++.+| ...+.  |++..+-.++||
T Consensus         2 ~f~~~V~~~l~~-IP~G~v~TYg~iA~~~g~p~~~RaVg~al~~np~~~~iPcHRVv~s~G~l~~y   66 (80)
T TIGR00589         2 PFQQRVWQALRT-IPYGETKSYGQLAARIGNPKAVRAVGGANGRNPLAILVPCHRVIGKNGSLTGY   66 (80)
T ss_pred             hHHHHHHHHHhC-CCCCCcCCHHHHHHHhCCCChHHHHHHHHHhCCCCCCCCCceeECCCCCCCCC
Confidence            467788887766 4445666666554   34455677788889999 54444  888888888876


No 53 
>PF04202 Mfp-3:  Foot protein 3;  InterPro: IPR007328 Mytilus foot protein-3 (Mfp-3) is a highly polymorphic protein family located in the byssal adhesive plaques of blue mussels.
Probab=28.19  E-value=46  Score=21.93  Aligned_cols=13  Identities=31%  Similarity=0.628  Sum_probs=6.5

Q ss_pred             CCCchhHHHHHHH
Q 039713            1 MADFSGCIILSLI   13 (511)
Q Consensus         1 m~~~~~~~~~~~~   13 (511)
                      |-++|+.+++.++
T Consensus         1 mnn~Si~VLlaLv   13 (71)
T PF04202_consen    1 MNNLSIAVLLALV   13 (71)
T ss_pred             CCchhHHHHHHHH
Confidence            5566554444433


No 54 
>PRK05933 type III secretion system protein; Validated
Probab=28.14  E-value=63  Score=29.46  Aligned_cols=42  Identities=19%  Similarity=0.239  Sum_probs=33.0

Q ss_pred             hHHHHHHHhhccCC-CCccc-ccc-CCCe--eecCeeeCCCCEEEee
Q 039713          358 YLQAIVKEVLRLHP-TPMAV-RES-TESF--TINGYEIPAKTRVFIN  399 (511)
Q Consensus       358 ~l~a~i~E~lRl~p-~~~~~-R~~-~~~~--~l~g~~Ipkg~~v~~~  399 (511)
                      -..--|+|-++|.+ ..... |.+ .+++  .++|..|.+|..|.++
T Consensus       316 RT~l~IkELL~L~~GSVIeLDk~a~GEpVDI~VNGrLIARGEVVVVd  362 (372)
T PRK05933        316 RYSLSVGEFLKLGPGSILQFDGVHPTLGVDIILNGAKVGRGEIIALG  362 (372)
T ss_pred             cccccHHHHhccCCCCEEEeCCcCCCCCEEEEECCEEEeeeeEEEEC
Confidence            35677999999999 66666 665 4554  4599999999999885


No 55 
>PF11227 DUF3025:  Protein of unknown function (DUF3025);  InterPro: IPR021390  Some members in this bacterial family of proteins are annotated as transmembrane proteins however this cannot be confirmed. Currently this family of proteins has no known function. 
Probab=27.10  E-value=37  Score=28.89  Aligned_cols=19  Identities=26%  Similarity=0.546  Sum_probs=17.3

Q ss_pred             hcccCCCCCCCCCCCCCCc
Q 039713          402 AICRDPKYWENPFEFCPER  420 (511)
Q Consensus       402 ~~~~d~~~~~dp~~F~P~R  420 (511)
                      .-|.|+..|.|...|+|-|
T Consensus       193 ~~n~~~~FY~d~~~FRp~R  211 (212)
T PF11227_consen  193 PDNEDPAFYDDTDVFRPGR  211 (212)
T ss_pred             CCCCCcccccCccccCCCC
Confidence            4499999999999999988


No 56 
>PF09926 DUF2158:  Uncharacterized small protein (DUF2158);  InterPro: IPR019226 This entry represents a family of predominantly prokaryotic proteins with no known function. 
Probab=26.48  E-value=65  Score=20.53  Aligned_cols=18  Identities=11%  Similarity=0.268  Sum_probs=15.5

Q ss_pred             hCCeEEEecCCccEEEec
Q 039713           65 YGPLIHFRLGSVPCVAVC   82 (511)
Q Consensus        65 yG~v~~~~~g~~~~v~v~   82 (511)
                      -|+|++++-||+.++|..
T Consensus         3 ~GDvV~LKSGGp~MTV~~   20 (53)
T PF09926_consen    3 IGDVVQLKSGGPRMTVTE   20 (53)
T ss_pred             CCCEEEEccCCCCeEEEE
Confidence            389999999999988874


No 57 
>PF08492 SRP72:  SRP72 RNA-binding domain;  InterPro: IPR013699  The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. This entry represents the RNA binding domain of the SRP72 subunit. This domain is responsible for the binding of SRP72 to the 7S SRP RNA []. ; GO: 0008312 7S RNA binding, 0006614 SRP-dependent cotranslational protein targeting to membrane, 0048500 signal recognition particle
Probab=26.02  E-value=44  Score=21.82  Aligned_cols=8  Identities=38%  Similarity=0.779  Sum_probs=5.9

Q ss_pred             CCCcccCC
Q 039713          417 CPERFIGE  424 (511)
Q Consensus       417 ~P~R~~~~  424 (511)
                      ||||||.-
T Consensus        44 DPERWLP~   51 (59)
T PF08492_consen   44 DPERWLPK   51 (59)
T ss_pred             CccccCch
Confidence            78888853


No 58 
>PHA02902 putative IMV membrane protein; Provisional
Probab=25.38  E-value=2.1e+02  Score=18.91  Aligned_cols=21  Identities=24%  Similarity=0.333  Sum_probs=9.0

Q ss_pred             HHHHHHHHHHHHHHHHhhcCC
Q 039713           10 LSLIWLVSLILARSILRRSKR   30 (511)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~~~~   30 (511)
                      +.+++++..++.+..+++.++
T Consensus         9 ~~v~v~Ivclliya~YrR~kc   29 (70)
T PHA02902          9 LAVIVIIFCLLIYAAYKRYKC   29 (70)
T ss_pred             HHHHHHHHHHHHHHHHHHhcC
Confidence            333333333444445555433


No 59 
>PF15330 SIT:  SHP2-interacting transmembrane adaptor protein, SIT
Probab=24.13  E-value=1.8e+02  Score=21.93  Aligned_cols=11  Identities=36%  Similarity=0.489  Sum_probs=7.1

Q ss_pred             CCCcccccccc
Q 039713           40 ALPIIGHLHLL   50 (511)
Q Consensus        40 ~~P~~G~~~~~   50 (511)
                      .-|+-||+-..
T Consensus        45 ~~p~YgNL~~~   55 (107)
T PF15330_consen   45 DDPCYGNLELQ   55 (107)
T ss_pred             CCccccccccc
Confidence            46778886544


No 60 
>COG4471 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=23.87  E-value=2.3e+02  Score=20.23  Aligned_cols=35  Identities=9%  Similarity=0.056  Sum_probs=28.6

Q ss_pred             HHHHHhhCCeEEEecCCccEEEecCHHHHHHHHHh
Q 039713           59 HKLSIRYGPLIHFRLGSVPCVAVCSADVAKDFFKT   93 (511)
Q Consensus        59 ~~~~~kyG~v~~~~~g~~~~v~v~dp~~~~~i~~~   93 (511)
                      .+.-++||+|....=-.+-++.-++-+.+.+++.+
T Consensus        19 aRqLrkfG~v~Y~Skk~kY~vlYvn~~~ve~~~~k   53 (90)
T COG4471          19 ARQLRKFGDVHYVSKKSKYVVLYVNEQDVEQIVEK   53 (90)
T ss_pred             hHHHHhcCCEEEEecceeEEEEEECHHHHHHHHHH
Confidence            34567899999887666778888999999999875


No 61 
>PTZ00218 40S ribosomal protein S29; Provisional
Probab=23.85  E-value=34  Score=21.76  Aligned_cols=14  Identities=29%  Similarity=0.736  Sum_probs=11.0

Q ss_pred             ccCCCCCCCC--ChHH
Q 039713          441 PFGSGRRVCP--GTTL  454 (511)
Q Consensus       441 ~Fg~G~r~C~--G~~~  454 (511)
                      .||-|+|.|.  |+.-
T Consensus        11 ~yGkGsr~C~vCg~~~   26 (54)
T PTZ00218         11 TYGKGSRQCRVCSNRH   26 (54)
T ss_pred             cCCCCCCeeecCCCcc
Confidence            5999999996  6643


No 62 
>PRK01844 hypothetical protein; Provisional
Probab=23.40  E-value=76  Score=21.63  Aligned_cols=22  Identities=14%  Similarity=0.078  Sum_probs=12.4

Q ss_pred             HHHHHHHHHHHHHHHHHhhcCC
Q 039713            9 ILSLIWLVSLILARSILRRSKR   30 (511)
Q Consensus         9 ~~~~~~~~~~~~~~~~~~~~~~   30 (511)
                      +.++.++++++..+++.++...
T Consensus         9 l~I~~li~G~~~Gff~ark~~~   30 (72)
T PRK01844          9 VGVVALVAGVALGFFIARKYMM   30 (72)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHH
Confidence            3444455566666666666544


No 63 
>PF05084 GRA6:  Granule antigen protein (GRA6);  InterPro: IPR008119  Toxoplasma gondii is an obligate intracellular apicomplexan protozoan parasite, with a complex lifestyle involving varied hosts []. It has two phases of growth: an intestinal phase in feline hosts, and an extra-intestinal phase in other mammals. Oocysts from infected cats develop into tachyzoites, and eventually, bradyzoites and zoitocysts in the extraintestinal host []. Transmission of the parasite occurs through contact with infected cats or raw/undercooked meat; in immunocompromised individuals, it can cause severe and often lethal toxoplasmosis. Acute infection in healthy humans can sometimes also cause tissue damage [].  The protozoan utilises a variety of secretory and antigenic proteins to invade a host and gain access to the intracellular environment []. These originate from distinct organelles in the T. gondii cell termed micronemes, rhoptries, and dense granules. They are released at specific times during invasion to ensure the proteins are allocated to their correct target destinations []. Dense granule antigens (GRAs) are released from the T. gondii tachyzoite while still encapsulated in a host vacuole. Gra6, one of these moieties, is associated with the parasitophorous vacuole []. It possesses a hydrophobic central region flanked by two hydrophilic domains, and is present as a single copy gene in the Toxoplasma gondii genome []. Gra6 shares a similar function with Gra2, in that it is rapidly targeted to a network of membranous tubules that connect with the vacuolar membrane []. Indeed, these two proteins, together with Gra4, form a multimeric complex that stabilises the parasite within the vacuole.
Probab=23.13  E-value=1.5e+02  Score=23.69  Aligned_cols=38  Identities=16%  Similarity=0.104  Sum_probs=15.0

Q ss_pred             HHHHHHHHHHHHHHHHhhc--CCCCCCCCCCCCCCccccc
Q 039713           10 LSLIWLVSLILARSILRRS--KRTSYFPPSPMALPIIGHL   47 (511)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~~--~~~~~~ppgp~~~P~~G~~   47 (511)
                      -.+++++.+..+.+.+.++  +++...|.|-.+-|--|+-
T Consensus       155 G~~VlA~~VA~L~~~F~RR~~rrsppepsgdgG~~~~G~~  194 (215)
T PF05084_consen  155 GAVVLAVSVAMLTWFFLRRTGRRSPPEPSGDGGGNDAGNN  194 (215)
T ss_pred             HHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCCccccc
Confidence            3344444444444433332  2222233333345555543


No 64 
>PF05393 Hum_adeno_E3A:  Human adenovirus early E3A glycoprotein;  InterPro: IPR008652 This family consists of several early glycoproteins (E3A), from human adenovirus type 2.; GO: 0016021 integral to membrane
Probab=22.33  E-value=1.9e+02  Score=20.51  Aligned_cols=6  Identities=50%  Similarity=0.938  Sum_probs=3.5

Q ss_pred             CCCccc
Q 039713           40 ALPIIG   45 (511)
Q Consensus        40 ~~P~~G   45 (511)
                      .-|++|
T Consensus        66 YrPvI~   71 (94)
T PF05393_consen   66 YRPVIG   71 (94)
T ss_pred             cccccc
Confidence            346666


No 65 
>PHA02681 ORF089 virion membrane protein; Provisional
Probab=21.44  E-value=3e+02  Score=19.30  Aligned_cols=6  Identities=50%  Similarity=0.706  Sum_probs=2.5

Q ss_pred             HHHhhc
Q 039713           23 SILRRS   28 (511)
Q Consensus        23 ~~~~~~   28 (511)
                      ..+++.
T Consensus        22 a~YRR~   27 (92)
T PHA02681         22 MMYRRS   27 (92)
T ss_pred             HHHHhc
Confidence            344443


No 66 
>PF13625 Helicase_C_3:  Helicase conserved C-terminal domain
Probab=20.90  E-value=2.2e+02  Score=22.15  Aligned_cols=41  Identities=10%  Similarity=0.206  Sum_probs=31.0

Q ss_pred             CCccHHHHHHHHhhCCeEEEecCCccEEEecCHHHHHHHHHhc
Q 039713           52 PIPHQALHKLSIRYGPLIHFRLGSVPCVAVCSADVAKDFFKTH   94 (511)
Q Consensus        52 ~~~~~~~~~~~~kyG~v~~~~~g~~~~v~v~dp~~~~~i~~~~   94 (511)
                      .+....+.+|.++||.+--.  .+..++...|++.++++...+
T Consensus        74 ~~v~~~i~~w~~~~g~v~l~--~~~~~l~~~d~~~l~~l~~~~  114 (129)
T PF13625_consen   74 QNVEQSIEDWARRYGRVRLY--KGAYLLECDDPELLDELLADP  114 (129)
T ss_pred             HHHHHHHHHHHHhcCCEEEe--cCeEEEEECCHHHHHHHHhCh
Confidence            34567889999999987432  246677888999999998654


No 67 
>PF14129 DUF4296:  Domain of unknown function (DUF4296)
Probab=20.83  E-value=3.2e+02  Score=19.44  Aligned_cols=48  Identities=4%  Similarity=0.032  Sum_probs=39.5

Q ss_pred             HHHHHHHHHHHhhhcCCChHHHHHHHHHHHhcCchHHHHHHHHHhhhh
Q 039713          295 RENIKSFIADMFAAGSDTPAITIEWALAQLINHPDVMKKAREEIDSVV  342 (511)
Q Consensus       295 ~~~i~~~~~~~~~ag~~tta~~l~~~l~~L~~~P~~~~~l~~Ei~~~~  342 (511)
                      ...........++-=+..++....-.+.+-++||+...++.+.+..-+
T Consensus        31 ~~~~~~~~~~~I~kKy~Ids~~f~~S~~YY~~~p~~~~~Iy~~V~~rL   78 (87)
T PF14129_consen   31 SDDNMIAYYQYIFKKYGIDSAQFDSSMVYYSRNPEEYEKIYDKVIERL   78 (87)
T ss_pred             HHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence            344555566778888999999999999999999999999999886644


No 68 
>PRK10597 DNA damage-inducible protein I; Provisional
Probab=20.80  E-value=2.8e+02  Score=19.59  Aligned_cols=38  Identities=11%  Similarity=0.227  Sum_probs=28.6

Q ss_pred             cHHHHHHHHhhCCe---EEEecCCccEEEecCH-----HHHHHHHH
Q 039713           55 HQALHKLSIRYGPL---IHFRLGSVPCVAVCSA-----DVAKDFFK   92 (511)
Q Consensus        55 ~~~~~~~~~kyG~v---~~~~~g~~~~v~v~dp-----~~~~~i~~   92 (511)
                      .+..++++++|.++   ++++.++.+-+.|++.     +.+.+++.
T Consensus        23 ~EL~kRl~~~fPd~~~~v~Vr~~s~n~lsv~g~~k~dK~~i~eiLq   68 (81)
T PRK10597         23 GELSRRIQYAFPDNEGHVSVRYAAANNLSVIGATKEDKDRISEILQ   68 (81)
T ss_pred             HHHHHHHHhhCCCCCccEEEeecCCCceEecCCCcchHHHHHHHHH
Confidence            46667888999987   8999998888888544     55555554


No 69 
>PF08776 VASP_tetra:  VASP tetramerisation domain;  InterPro: IPR014885 Vasodilator-stimulated phosphoprotein (VASP) is an actin cytoskeletal regulatory protein. This region corresponds to the tetramerisation domain which forms a right handed alpha helical coiled coil structure []. ; PDB: 1USE_A 1USD_A.
Probab=20.72  E-value=1.2e+02  Score=17.94  Aligned_cols=29  Identities=24%  Similarity=0.464  Sum_probs=18.3

Q ss_pred             chHHHHHHHHHhhhhCCCCccCccccCCChhHHHHHHHhhcc
Q 039713          328 PDVMKKAREEIDSVVGKSRLVEESDIVDLPYLQAIVKEVLRL  369 (511)
Q Consensus       328 P~~~~~l~~Ei~~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl  369 (511)
                      .++++.+|.|++.+             +-..++|+..|--|.
T Consensus        10 qEIL~EvrkEl~K~-------------K~EIIeA~~~eL~r~   38 (40)
T PF08776_consen   10 QEILEEVRKELQKV-------------KEEIIEAIRQELSRR   38 (40)
T ss_dssp             HHHHHHHHHHHHHH-------------HHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHH-------------HHHHHHHHHHHHhcc
Confidence            36777777777765             334567776665543


No 70 
>PF14483 Cut8_M:  Cut8 dimerisation domain; PDB: 3Q5W_A 3Q5X_A.
Probab=20.62  E-value=1.4e+02  Score=17.39  Aligned_cols=12  Identities=25%  Similarity=0.634  Sum_probs=9.7

Q ss_pred             hcCchHHHHHHH
Q 039713          325 INHPDVMKKARE  336 (511)
Q Consensus       325 ~~~P~~~~~l~~  336 (511)
                      .+||++++.+++
T Consensus        24 ~~HPei~~~i~~   35 (38)
T PF14483_consen   24 ERHPEIQQEIRS   35 (38)
T ss_dssp             HHSTHHHHHHHT
T ss_pred             HhChhHHHHHHh
Confidence            489999888875


No 71 
>PF07849 DUF1641:  Protein of unknown function (DUF1641);  InterPro: IPR012440 Archaeal and bacterial hypothetical proteins are found in this family, with the region in question being approximately 40 residues long. 
Probab=20.41  E-value=1.1e+02  Score=18.33  Aligned_cols=19  Identities=21%  Similarity=0.319  Sum_probs=15.0

Q ss_pred             HHHHHHHhcCchHHHHHHH
Q 039713          318 EWALAQLINHPDVMKKARE  336 (511)
Q Consensus       318 ~~~l~~L~~~P~~~~~l~~  336 (511)
                      .|-+.-++++||+|.-|.-
T Consensus        13 l~gl~~~l~DpdvqrgL~~   31 (42)
T PF07849_consen   13 LFGLLRALRDPDVQRGLGF   31 (42)
T ss_pred             HHHHHHHHcCHHHHHHHHH
Confidence            4667788999999987764


No 72 
>PRK02302 hypothetical protein; Provisional
Probab=20.30  E-value=2.3e+02  Score=20.41  Aligned_cols=34  Identities=12%  Similarity=0.124  Sum_probs=27.3

Q ss_pred             HHHHhhCCeEEEecCCccEEEecCHHHHHHHHHh
Q 039713           60 KLSIRYGPLIHFRLGSVPCVAVCSADVAKDFFKT   93 (511)
Q Consensus        60 ~~~~kyG~v~~~~~g~~~~v~v~dp~~~~~i~~~   93 (511)
                      +.-++||+|..+.=-.+.+++-+|-+.++++..+
T Consensus        21 r~LrkfG~I~Y~Skk~kYvvlYvn~~~~e~~~~k   54 (89)
T PRK02302         21 RKLSKYGDIVYHSKRSRYLVLYVNKEDVEQKLEE   54 (89)
T ss_pred             HHHhhcCcEEEEeccccEEEEEECHHHHHHHHHH
Confidence            3457899999887666778888899999998865


No 73 
>PF06643 DUF1158:  Protein of unknown function (DUF1158);  InterPro: IPR010590 This family consists of several enterobacterial YbdJ proteins. The function of this family is unknown
Probab=20.27  E-value=1.5e+02  Score=20.00  Aligned_cols=25  Identities=24%  Similarity=0.293  Sum_probs=17.1

Q ss_pred             hHHHHHHHHHHHHHHHHHHHhhcCC
Q 039713            6 GCIILSLIWLVSLILARSILRRSKR   30 (511)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~   30 (511)
                      .+++.++..++=+.+...+++||++
T Consensus        55 FClWFLlLGaiEy~viRfiwrRwfs   79 (82)
T PF06643_consen   55 FCLWFLLLGAIEYFVIRFIWRRWFS   79 (82)
T ss_pred             HHHHHHHHhHHHHHHHHHHHHHHhh
Confidence            3455666666777777888888765


Done!